locus-tag class description KS242_00005 PF00308 Bacterial dnaA protein KS242_00005 PF08299 Bacterial dnaA protein helix-turn-helix KS242_00005 PF11638 DnaA N-terminal domain KS242_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KS242_00010 PF02767 DNA polymerase III beta subunit, central domain KS242_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KS242_00020 PF02463 RecF/RecN/SMC N terminal domain KS242_00025 PF04025 Domain of unknown function (DUF370) KS242_00030 PF01751 Toprim domain KS242_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_00030 PF00204 DNA gyrase B KS242_00030 PF00986 DNA gyrase B subunit, carboxyl terminus KS242_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A KS242_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller KS242_00040 PF00072 Response regulator receiver domain KS242_00045 PF14175 YaaC-like Protein KS242_00050 PF00571 CBS domain KS242_00050 PF00478 IMP dehydrogenase / GMP reductase domain KS242_00055 PF16868 NMT1-like family KS242_00070 PF03167 Uracil DNA glycosylase superfamily KS242_00075 PF07943 Penicillin-binding protein 5, C-terminal domain KS242_00075 PF00768 D-alanyl-D-alanine carboxypeptidase KS242_00080 PF02403 Seryl-tRNA synthetase N-terminal domain KS242_00080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KS242_00090 PF14748 Pyrroline-5-carboxylate reductase dimerisation KS242_00090 PF03807 NADP oxidoreductase coenzyme F420-dependent KS242_00095 PF01712 Deoxynucleoside kinase KS242_00100 PF01712 Deoxynucleoside kinase KS242_00110 PF02899 Phage integrase, N-terminal SAM-like domain KS242_00110 PF00589 Phage integrase family KS242_00120 PF02384 N-6 DNA Methylase KS242_00120 PF07669 Eco57I restriction-modification methylase KS242_00205 PF03323 Bacillus/Clostridium GerA spore germination protein KS242_00210 PF01520 N-acetylmuramoyl-L-alanine amidase KS242_00210 PF05036 Sporulation related domain KS242_00220 PF00171 Aldehyde dehydrogenase family KS242_00225 PF00501 AMP-binding enzyme KS242_00225 PF13193 AMP-binding enzyme C-terminal domain KS242_00230 PF01965 DJ-1/PfpI family KS242_00240 PF00704 Glycosyl hydrolases family 18 KS242_00240 PF01476 LysM domain KS242_00245 PF00857 Isochorismatase family KS242_00250 PF14437 MafB19-like deaminase KS242_00260 PF12169 DNA polymerase III subunits gamma and tau domain III KS242_00265 PF02575 YbaB/EbfC DNA-binding family KS242_00270 PF02132 RecR protein KS242_00270 PF13662 Toprim domain KS242_00335 PF01276 Orn/Lys/Arg decarboxylase, major domain KS242_00335 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KS242_00340 PF02223 Thymidylate kinase KS242_00345 PF06153 Cyclic-di-AMP receptor KS242_00350 PF03885 Protein of unknown function (DUF327) KS242_00355 PF09115 DNA polymerase III, delta subunit, C terminal KS242_00360 PF04468 PSP1 C-terminal conserved region KS242_00365 PF06156 Initiation control protein YabA KS242_00375 PF05175 Methyltransferase small domain KS242_00380 PF01541 GIY-YIG catalytic domain KS242_00385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KS242_00390 PF18277 AbrB C-terminal domain KS242_00390 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KS242_00395 PF08264 Anticodon-binding domain of tRNA KS242_00395 PF09334 tRNA synthetases class I (M) KS242_00395 PF01588 Putative tRNA binding domain KS242_00400 PF01026 TatD related DNase KS242_00405 PF13331 Domain of unknown function (DUF4093) KS242_00405 PF13662 Toprim domain KS242_00410 PF00398 Ribosomal RNA adenine dimethylase KS242_00415 PF05582 YabG peptidase U57 KS242_00420 PF06257 Biofilm formation stimulator VEG KS242_00425 PF00269 Small, acid-soluble spore proteins, alpha/beta type KS242_00430 PF08544 GHMP kinases C terminal KS242_00430 PF00288 GHMP kinases N terminal domain KS242_00435 PF09182 Bacterial purine repressor, N-terminal KS242_00435 PF00156 Phosphoribosyl transferase domain KS242_00440 PF04026 SpoVG KS242_00445 PF00483 Nucleotidyl transferase KS242_00445 PF00132 Bacterial transferase hexapeptide (six repeats) KS242_00450 PF14572 Phosphoribosyl synthetase-associated domain KS242_00450 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KS242_00455 PF01386 Ribosomal L25p family KS242_00455 PF14693 Ribosomal protein TL5, C-terminal domain KS242_00460 PF04542 Sigma-70 region 2 KS242_00460 PF08281 Sigma-70, region 4 KS242_00475 PF13396 Phospholipase_D-nuclease N-terminal KS242_00480 PF00005 ABC transporter KS242_00480 PF13732 Domain of unknown function (DUF4162) KS242_00485 PF12679 ABC-2 family transporter protein KS242_00490 PF01195 Peptidyl-tRNA hydrolase KS242_00495 PF10955 Protein of unknown function (DUF2757) KS242_00500 PF02559 CarD-like/TRCF domain KS242_00500 PF00270 DEAD/DEAH box helicase KS242_00500 PF00271 Helicase conserved C-terminal domain KS242_00500 PF03461 TRCF domain KS242_00500 PF17757 UvrB interaction domain KS242_00505 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KS242_00505 PF15714 Stage V sporulation protein T C-terminal, transcription factor KS242_00510 PF12833 Helix-turn-helix domain KS242_00510 PF02311 AraC-like ligand binding domain KS242_00520 PF01943 Polysaccharide biosynthesis protein KS242_00520 PF14667 Polysaccharide biosynthesis C-terminal domain KS242_00525 PF03819 MazG nucleotide pyrophosphohydrolase domain KS242_00525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KS242_00530 PF01479 S4 domain KS242_00535 PF07873 YabP family KS242_00550 PF00575 S1 RNA binding domain KS242_00565 PF00300 Histidine phosphatase superfamily (branch 1) KS242_00580 PF07690 Major Facilitator Superfamily KS242_00590 PF07228 Stage II sporulation protein E (SpoIIE) KS242_00595 PF00092 von Willebrand factor type A domain KS242_00600 PF00069 Protein kinase domain KS242_00605 PF01171 PP-loop family KS242_00605 PF11734 TilS substrate C-terminal domain KS242_00610 PF00156 Phosphoribosyl transferase domain KS242_00615 PF06480 FtsH Extracellular KS242_00615 PF17862 AAA+ lid domain KS242_00615 PF00004 ATPase family associated with various cellular activities (AAA) KS242_00615 PF01434 Peptidase family M41 KS242_00620 PF01430 Hsp33 protein KS242_00625 PF00291 Pyridoxal-phosphate dependent enzyme KS242_00630 PF00809 Pterin binding enzyme KS242_00635 PF02152 Dihydroneopterin aldolase KS242_00640 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KS242_00645 PF01207 Dihydrouridine synthase (Dus) KS242_00650 PF00152 tRNA synthetases class II (D, K and N) KS242_00650 PF01336 OB-fold nucleic acid binding domain KS242_00730 PF02308 MgtC family KS242_00735 PF05848 CtsR N-terminal HTH domain KS242_00735 PF17727 CtsR C-terminal dimerization domain KS242_00740 PF02151 UvrB/uvrC motif KS242_00745 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KS242_00750 PF00004 ATPase family associated with various cellular activities (AAA) KS242_00750 PF07724 AAA domain (Cdc48 subfamily) KS242_00750 PF17871 AAA lid domain KS242_00750 PF10431 C-terminal, D2-small domain, of ClpB protein KS242_00750 PF02861 Clp amino terminal domain, pathogenicity island component KS242_00755 PF18073 Rubredoxin metal binding domain KS242_00765 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KS242_00770 PF02542 YgbB family KS242_00775 PF00749 tRNA synthetases class I (E and Q), catalytic domain KS242_00780 PF06426 Serine acetyltransferase, N-terminal KS242_00780 PF00132 Bacterial transferase hexapeptide (six repeats) KS242_00785 PF09190 DALR domain KS242_00785 PF01406 tRNA synthetases class I (C) catalytic domain KS242_00790 PF00636 Ribonuclease III domain KS242_00795 PF08032 RNA 2'-O ribose methyltransferase substrate binding KS242_00795 PF00588 SpoU rRNA Methylase family KS242_00800 PF05991 YacP-like NYN domain KS242_00805 PF08281 Sigma-70, region 4 KS242_00805 PF04542 Sigma-70 region 2 KS242_00810 PF00471 Ribosomal protein L33 KS242_00815 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KS242_00820 PF02357 Transcription termination factor nusG KS242_00820 PF00467 KOW motif KS242_00825 PF03946 Ribosomal protein L11, N-terminal domain KS242_00825 PF00298 Ribosomal protein L11, RNA binding domain KS242_00830 PF00687 Ribosomal protein L1p/L10e family KS242_00835 PF00466 Ribosomal protein L10 KS242_00840 PF16320 Ribosomal protein L7/L12 dimerisation domain KS242_00840 PF00542 Ribosomal protein L7/L12 C-terminal domain KS242_00845 PF05175 Methyltransferase small domain KS242_00850 PF04561 RNA polymerase Rpb2, domain 2 KS242_00850 PF04565 RNA polymerase Rpb2, domain 3 KS242_00850 PF10385 RNA polymerase beta subunit external 1 domain KS242_00850 PF00562 RNA polymerase Rpb2, domain 6 KS242_00850 PF04560 RNA polymerase Rpb2, domain 7 KS242_00850 PF04563 RNA polymerase beta subunit KS242_00855 PF04997 RNA polymerase Rpb1, domain 1 KS242_00855 PF04983 RNA polymerase Rpb1, domain 3 KS242_00855 PF05000 RNA polymerase Rpb1, domain 4 KS242_00855 PF04998 RNA polymerase Rpb1, domain 5 KS242_00855 PF00623 RNA polymerase Rpb1, domain 2 KS242_00860 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KS242_00865 PF00164 Ribosomal protein S12/S23 KS242_00870 PF00177 Ribosomal protein S7p/S5e KS242_00875 PF00679 Elongation factor G C-terminus KS242_00875 PF14492 Elongation Factor G, domain II KS242_00875 PF00009 Elongation factor Tu GTP binding domain KS242_00875 PF03144 Elongation factor Tu domain 2 KS242_00875 PF03764 Elongation factor G, domain IV KS242_00880 PF03143 Elongation factor Tu C-terminal domain KS242_00880 PF03144 Elongation factor Tu domain 2 KS242_00880 PF00009 Elongation factor Tu GTP binding domain KS242_00885 PF00338 Ribosomal protein S10p/S20e KS242_00890 PF00297 Ribosomal protein L3 KS242_00895 PF00573 Ribosomal protein L4/L1 family KS242_00900 PF00276 Ribosomal protein L23 KS242_00905 PF03947 Ribosomal Proteins L2, C-terminal domain KS242_00905 PF00181 Ribosomal Proteins L2, RNA binding domain KS242_00910 PF00203 Ribosomal protein S19 KS242_00915 PF00237 Ribosomal protein L22p/L17e KS242_00920 PF00189 Ribosomal protein S3, C-terminal domain KS242_00920 PF07650 KH domain KS242_00925 PF00252 Ribosomal protein L16p/L10e KS242_00930 PF00831 Ribosomal L29 protein KS242_00935 PF00366 Ribosomal protein S17 KS242_00940 PF00238 Ribosomal protein L14p/L23e KS242_00945 PF00467 KOW motif KS242_00945 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KS242_00950 PF00281 Ribosomal protein L5 KS242_00950 PF00673 ribosomal L5P family C-terminus KS242_00955 PF00253 Ribosomal protein S14p/S29e KS242_00960 PF00410 Ribosomal protein S8 KS242_00965 PF00347 Ribosomal protein L6 KS242_00970 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KS242_00975 PF03719 Ribosomal protein S5, C-terminal domain KS242_00975 PF00333 Ribosomal protein S5, N-terminal domain KS242_00980 PF00327 Ribosomal protein L30p/L7e KS242_00985 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KS242_00990 PF00344 SecY translocase KS242_00995 PF05191 Adenylate kinase, active site lid KS242_01005 PF01176 Translation initiation factor 1A / IF-1 KS242_01010 PF00444 Ribosomal protein L36 KS242_01015 PF00416 Ribosomal protein S13/S18 KS242_01020 PF00411 Ribosomal protein S11 KS242_01025 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KS242_01025 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KS242_01025 PF01000 RNA polymerase Rpb3/RpoA insert domain KS242_01030 PF01196 Ribosomal protein L17 KS242_01035 PF00005 ABC transporter KS242_01040 PF00005 ABC transporter KS242_01045 PF02361 Cobalt transport protein KS242_01050 PF01416 tRNA pseudouridine synthase KS242_01055 PF00572 Ribosomal protein L13 KS242_01060 PF00380 Ribosomal protein S9/S16 KS242_01075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KS242_01080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KS242_01080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KS242_01080 PF02378 Phosphotransferase system, EIIC KS242_01085 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KS242_01085 PF02378 Phosphotransferase system, EIIC KS242_01090 PF00834 Ribulose-phosphate 3 epimerase family KS242_01105 PF03009 Glycerophosphoryl diester phosphodiesterase family KS242_01135 PF16916 Dimerisation domain of Zinc Transporter KS242_01135 PF01545 Cation efflux family KS242_01155 PF01520 N-acetylmuramoyl-L-alanine amidase KS242_01160 PF10609 NUBPL iron-transfer P-loop NTPase KS242_01165 PF17898 Spore germination GerD central core domain KS242_01170 PF01522 Polysaccharide deacetylase KS242_01215 PF00589 Phage integrase family KS242_01270 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS242_01270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KS242_01275 PF02040 Arsenical pump membrane protein KS242_01280 PF01022 Bacterial regulatory protein, arsR family KS242_01290 PF00999 Sodium/hydrogen exchanger family KS242_01295 PF01709 Transcriptional regulator KS242_01300 PF00082 Subtilase family KS242_01300 PF05922 Peptidase inhibitor I9 KS242_01305 PF00171 Aldehyde dehydrogenase family KS242_01365 PF07690 Major Facilitator Superfamily KS242_01380 PF08281 Sigma-70, region 4 KS242_01380 PF04542 Sigma-70 region 2 KS242_01385 PF13490 Putative zinc-finger KS242_01390 PF02457 DisA bacterial checkpoint controller nucleotide-binding KS242_01395 PF07949 YbbR-like protein KS242_01400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KS242_01400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KS242_01400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KS242_01400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KS242_01405 PF01380 SIS domain KS242_01415 PF00665 Integrase core domain KS242_01420 PF11426 Tn7 transposition regulator TnsC KS242_01420 PF13401 AAA domain KS242_01430 PF18623 TnsE C-terminal domain KS242_01445 PF00005 ABC transporter KS242_01450 PF02687 FtsX-like permease family KS242_01450 PF12704 MacB-like periplasmic core domain KS242_01470 PF02463 RecF/RecN/SMC N terminal domain KS242_01475 PF13361 UvrD-like helicase C-terminal domain KS242_01475 PF00580 UvrD/REP helicase N-terminal domain KS242_01485 PF07730 Histidine kinase KS242_01490 PF00072 Response regulator receiver domain KS242_01490 PF00196 Bacterial regulatory proteins, luxR family KS242_01495 PF00005 ABC transporter KS242_01520 PF04616 Glycosyl hydrolases family 43 KS242_01520 PF16369 C-terminal lipocalin-like domain KS242_01525 PF01261 Xylose isomerase-like TIM barrel KS242_01600 PF00990 Diguanylate cyclase, GGDEF domain KS242_01600 PF00360 Phytochrome region KS242_01600 PF01590 GAF domain KS242_01600 PF00563 EAL domain KS242_01610 PF07690 Major Facilitator Superfamily KS242_01620 PF07690 Major Facilitator Superfamily KS242_01625 PF00144 Beta-lactamase KS242_01650 PF02581 Thiamine monophosphate synthase KS242_01655 PF01266 FAD dependent oxidoreductase KS242_01660 PF02597 ThiS family KS242_01665 PF05690 Thiazole biosynthesis protein ThiG KS242_01670 PF00899 ThiF family KS242_01685 PF00583 Acetyltransferase (GNAT) family KS242_01690 PF00582 Universal stress protein family KS242_01705 PF00005 ABC transporter KS242_01720 PF00248 Aldo/keto reductase family KS242_01725 PF00248 Aldo/keto reductase family KS242_01745 PF13411 MerR HTH family regulatory protein KS242_01745 PF07739 TipAS antibiotic-recognition domain KS242_01750 PF11514 Protein of unknown function (DUF3219) KS242_01760 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KS242_01760 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KS242_01760 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KS242_01765 PF00216 Bacterial DNA-binding protein KS242_01790 PF00571 CBS domain KS242_01790 PF03471 Transporter associated domain KS242_01790 PF01595 Cyclin M transmembrane N-terminal domain KS242_01795 PF07883 Cupin domain KS242_01795 PF12833 Helix-turn-helix domain KS242_01800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KS242_01800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KS242_01825 PF03480 Bacterial extracellular solute-binding protein, family 7 KS242_01830 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KS242_01835 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KS242_01845 PF06724 Domain of Unknown Function (DUF1206) KS242_01850 PF07849 Protein of unknown function (DUF1641) KS242_01855 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS242_01860 PF07885 Ion channel KS242_01860 PF02254 TrkA-N domain KS242_01875 PF00440 Bacterial regulatory proteins, tetR family KS242_01880 PF07690 Major Facilitator Superfamily KS242_01885 PF12897 Alanine-glyoxylate amino-transferase KS242_01890 PF01070 FMN-dependent dehydrogenase KS242_01895 PF06146 Phosphate-starvation-inducible E KS242_01905 PF00440 Bacterial regulatory proteins, tetR family KS242_01905 PF13977 BetI-type transcriptional repressor, C-terminal KS242_01910 PF00171 Aldehyde dehydrogenase family KS242_01915 PF03949 Malic enzyme, NAD binding domain KS242_01915 PF00390 Malic enzyme, N-terminal domain KS242_01925 PF00106 short chain dehydrogenase KS242_01935 PF00171 Aldehyde dehydrogenase family KS242_01940 PF13460 NAD(P)H-binding KS242_01950 PF00296 Luciferase-like monooxygenase KS242_01955 PF00881 Nitroreductase family KS242_01975 PF07875 Coat F domain KS242_01980 PF13823 Alcohol dehydrogenase GroES-associated KS242_01980 PF08240 Alcohol dehydrogenase GroES-like domain KS242_01980 PF00107 Zinc-binding dehydrogenase KS242_01995 PF04525 LURP-one-related KS242_02000 PF11066 Protein of unknown function (DUF2867) KS242_02000 PF13460 NAD(P)H-binding KS242_02010 PF13462 Thioredoxin KS242_02015 PF02600 Disulfide bond formation protein DsbB KS242_02020 PF04172 LrgB-like family KS242_02025 PF03788 LrgA family KS242_02030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS242_02030 PF03466 LysR substrate binding domain KS242_02040 PF01266 FAD dependent oxidoreductase KS242_02045 PF02386 Cation transport protein KS242_02050 PF01037 Lrp/AsnC ligand binding domain KS242_02055 PF00155 Aminotransferase class I and II KS242_02065 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KS242_02075 PF03123 CAT RNA binding domain KS242_02075 PF00874 PRD domain KS242_02080 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KS242_02080 PF00367 phosphotransferase system, EIIB KS242_02080 PF02378 Phosphotransferase system, EIIC KS242_02095 PF00392 Bacterial regulatory proteins, gntR family KS242_02100 PF00005 ABC transporter KS242_02115 PF01156 Inosine-uridine preferring nucleoside hydrolase KS242_02120 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain KS242_02120 PF01740 STAS domain KS242_02125 PF00561 alpha/beta hydrolase fold KS242_02140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS242_02145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS242_02160 PF13539 D-alanyl-D-alanine carboxypeptidase KS242_02165 PF01966 HD domain KS242_02170 PF16916 Dimerisation domain of Zinc Transporter KS242_02170 PF01545 Cation efflux family KS242_02185 PF02540 NAD synthase KS242_02190 PF01741 Large-conductance mechanosensitive channel, MscL KS242_02200 PF07690 Major Facilitator Superfamily KS242_02205 PF02245 Methylpurine-DNA glycosylase (MPG) KS242_02210 PF02833 DHHA2 domain KS242_02210 PF01368 DHH family KS242_02215 PF00248 Aldo/keto reductase family KS242_02220 PF01202 Shikimate kinase KS242_02225 PF01501 Glycosyl transferase family 8 KS242_02230 PF02829 3H domain KS242_02230 PF08279 HTH domain KS242_02235 PF00106 short chain dehydrogenase KS242_02240 PF01613 Flavin reductase like domain KS242_02250 PF04397 LytTr DNA-binding domain KS242_02250 PF00072 Response regulator receiver domain KS242_02255 PF00005 ABC transporter KS242_02265 PF00083 Sugar (and other) transporter KS242_02275 PF00005 ABC transporter KS242_02275 PF00664 ABC transporter transmembrane region KS242_02290 PF03547 Membrane transport protein KS242_02295 PF03949 Malic enzyme, NAD binding domain KS242_02295 PF00390 Malic enzyme, N-terminal domain KS242_02300 PF01565 FAD binding domain KS242_02300 PF02913 FAD linked oxidases, C-terminal domain KS242_02310 PF01638 HxlR-like helix-turn-helix KS242_02315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KS242_02320 PF03707 Bacterial signalling protein N terminal repeat KS242_02320 PF00563 EAL domain KS242_02320 PF00990 Diguanylate cyclase, GGDEF domain KS242_02325 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS242_02335 PF00535 Glycosyl transferase family 2 KS242_02345 PF09586 Bacterial membrane protein YfhO KS242_02355 PF01380 SIS domain KS242_02355 PF01418 Helix-turn-helix domain, rpiR family KS242_02360 PF00485 Phosphoribulokinase / Uridine kinase family KS242_02365 PF00367 phosphotransferase system, EIIB KS242_02365 PF02378 Phosphotransferase system, EIIC KS242_02370 PF16657 Maltogenic Amylase, C-terminal domain KS242_02370 PF00128 Alpha amylase, catalytic domain KS242_02375 PF07702 UTRA domain KS242_02375 PF00392 Bacterial regulatory proteins, gntR family KS242_02380 PF00583 Acetyltransferase (GNAT) family KS242_02395 PF07690 Major Facilitator Superfamily KS242_02420 PF16242 Pyridoxamine 5'-phosphate oxidase like KS242_02430 PF00465 Iron-containing alcohol dehydrogenase KS242_02440 PF00465 Iron-containing alcohol dehydrogenase KS242_02450 PF00392 Bacterial regulatory proteins, gntR family KS242_02455 PF00005 ABC transporter KS242_02460 PF00005 ABC transporter KS242_02465 PF12679 ABC-2 family transporter protein KS242_02470 PF02566 OsmC-like protein KS242_02475 PF02096 60Kd inner membrane protein KS242_02495 PF00005 ABC transporter KS242_02500 PF12679 ABC-2 family transporter protein KS242_02520 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KS242_02525 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KS242_02535 PF00258 Flavodoxin KS242_02540 PF01894 Uncharacterised protein family UPF0047 KS242_02545 PF12792 CSS motif domain associated with EAL KS242_02545 PF00563 EAL domain KS242_02550 PF02743 Cache domain KS242_02550 PF00672 HAMP domain KS242_02550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS242_02565 PF03070 TENA/THI-4/PQQC family KS242_02570 PF08543 Phosphomethylpyrimidine kinase KS242_02575 PF02110 Hydroxyethylthiazole kinase family KS242_02580 PF10925 Protein of unknown function (DUF2680) KS242_02585 PF02581 Thiamine monophosphate synthase KS242_02590 PF02810 SEC-C motif KS242_02600 PF00082 Subtilase family KS242_02615 PF00293 NUDIX domain KS242_02615 PF13344 Haloacid dehalogenase-like hydrolase KS242_02625 PF00535 Glycosyl transferase family 2 KS242_02625 PF13181 Tetratricopeptide repeat KS242_02635 PF12823 Domain of unknown function (DUF3817) KS242_02640 PF00795 Carbon-nitrogen hydrolase KS242_02645 PF00465 Iron-containing alcohol dehydrogenase KS242_02650 PF00155 Aminotransferase class I and II KS242_02655 PF00581 Rhodanese-like domain KS242_02655 PF00753 Metallo-beta-lactamase superfamily KS242_02670 PF01820 D-ala D-ala ligase N-terminus KS242_02670 PF07478 D-ala D-ala ligase C-terminus KS242_02675 PF06508 Queuosine biosynthesis protein QueC KS242_02680 PF01242 6-pyruvoyl tetrahydropterin synthase KS242_02685 PF04055 Radical SAM superfamily KS242_02690 PF00764 Arginosuccinate synthase KS242_02695 PF14698 Argininosuccinate lyase C-terminal KS242_02695 PF00206 Lyase KS242_02700 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KS242_02700 PF00117 Glutamine amidotransferase class-I KS242_02705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KS242_02705 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KS242_02710 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KS242_02710 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KS242_02730 PF00677 Lumazine binding domain KS242_02735 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KS242_02735 PF00925 GTP cyclohydrolase II KS242_02740 PF00885 6,7-dimethyl-8-ribityllumazine synthase KS242_02745 PF12697 Alpha/beta hydrolase family KS242_02755 PF03551 Transcriptional regulator PadR-like family KS242_02770 PF00106 short chain dehydrogenase KS242_02780 PF00255 Glutathione peroxidase KS242_02790 PF17773 UPF0176 acylphosphatase like domain KS242_02790 PF00581 Rhodanese-like domain KS242_02790 PF12368 Rhodanase C-terminal KS242_02795 PF00313 'Cold-shock' DNA-binding domain KS242_02805 PF00156 Phosphoribosyl transferase domain KS242_02815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KS242_02815 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KS242_02820 PF03477 ATP cone domain KS242_02820 PF02867 Ribonucleotide reductase, barrel domain KS242_02820 PF00317 Ribonucleotide reductase, all-alpha domain KS242_02830 PF01258 Prokaryotic dksA/traR C4-type zinc finger KS242_02840 PF00535 Glycosyl transferase family 2 KS242_02845 PF13180 PDZ domain KS242_02850 PF00072 Response regulator receiver domain KS242_02850 PF00486 Transcriptional regulatory protein, C terminal KS242_02855 PF00512 His Kinase A (phospho-acceptor) domain KS242_02855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_02855 PF18719 ArlS sensor domain KS242_02860 PF00679 Elongation factor G C-terminus KS242_02860 PF14492 Elongation Factor G, domain II KS242_02860 PF00009 Elongation factor Tu GTP binding domain KS242_02860 PF03144 Elongation factor Tu domain 2 KS242_02875 PF12704 MacB-like periplasmic core domain KS242_02875 PF02687 FtsX-like permease family KS242_02880 PF00005 ABC transporter KS242_02890 PF05746 DALR anticodon binding domain KS242_02890 PF00750 tRNA synthetases class I (R) KS242_02890 PF03485 Arginyl tRNA synthetase N terminal domain KS242_02895 PF09587 Bacterial capsule synthesis protein PGA_cap KS242_02900 PF00085 Thioredoxin KS242_02905 PF01566 Natural resistance-associated macrophage protein KS242_02910 PF00781 Diacylglycerol kinase catalytic domain KS242_02915 PF16326 ABC transporter C-terminal domain KS242_02915 PF00005 ABC transporter KS242_02915 PF12848 ABC transporter KS242_02935 PF00561 alpha/beta hydrolase fold KS242_02940 PF00270 DEAD/DEAH box helicase KS242_02940 PF00271 Helicase conserved C-terminal domain KS242_02945 PF03703 Bacterial PH domain KS242_02950 PF03703 Bacterial PH domain KS242_02960 PF01694 Rhomboid family KS242_02965 PF01648 4'-phosphopantetheinyl transferase superfamily KS242_02970 PF01256 Carbohydrate kinase KS242_02970 PF03853 YjeF-related protein N-terminus KS242_02980 PF01168 Alanine racemase, N-terminal domain KS242_02980 PF00842 Alanine racemase, C-terminal domain KS242_02985 PF01402 Ribbon-helix-helix protein, copG family KS242_02990 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KS242_02995 PF08678 Rsbr N terminal KS242_02995 PF01740 STAS domain KS242_03000 PF01740 STAS domain KS242_03005 PF13581 Histidine kinase-like ATPase domain KS242_03010 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain KS242_03010 PF07228 Stage II sporulation protein E (SpoIIE) KS242_03015 PF01740 STAS domain KS242_03020 PF13581 Histidine kinase-like ATPase domain KS242_03025 PF04545 Sigma-70, region 4 KS242_03025 PF04539 Sigma-70 region 3 KS242_03025 PF04542 Sigma-70 region 2 KS242_03030 PF07228 Stage II sporulation protein E (SpoIIE) KS242_03035 PF17674 HHH domain KS242_03035 PF00575 S1 RNA binding domain KS242_03035 PF09371 Tex-like protein N-terminal domain KS242_03035 PF16921 Tex protein YqgF-like domain KS242_03045 PF10263 SprT-like family KS242_03135 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KS242_03140 PF00814 Glycoprotease family KS242_03145 PF00583 Acetyltransferase (GNAT) family KS242_03150 PF00814 Glycoprotease family KS242_03155 PF00005 ABC transporter KS242_03155 PF16326 ABC transporter C-terminal domain KS242_03155 PF12848 ABC transporter KS242_03160 PF02629 CoA binding domain KS242_03160 PF06971 Putative DNA-binding protein N-terminus KS242_03165 PF00005 ABC transporter KS242_03170 PF03649 Uncharacterised protein family (UPF0014) KS242_03185 PF07690 Major Facilitator Superfamily KS242_03190 PF13419 Haloacid dehalogenase-like hydrolase KS242_03195 PF01497 Periplasmic binding protein KS242_03205 PF01925 Sulfite exporter TauE/SafE KS242_03210 PF04474 Protein of unknown function (DUF554) KS242_03215 PF02652 L-lactate permease KS242_03220 PF00056 lactate/malate dehydrogenase, NAD binding domain KS242_03220 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KS242_03225 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal KS242_03225 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal KS242_03230 PF04463 Protein of unknown function (DUF523) KS242_03240 PF01381 Helix-turn-helix KS242_03250 PF04073 Aminoacyl-tRNA editing domain KS242_03255 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KS242_03255 PF00925 GTP cyclohydrolase II KS242_03260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KS242_03260 PF01872 RibD C-terminal domain KS242_03265 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) KS242_03270 PF18801 response regulator aspartate phosphatase H, N terminal KS242_03280 PF00324 Amino acid permease KS242_03285 PF02645 Uncharacterised protein, DegV family COG1307 KS242_03290 PF12706 Beta-lactamase superfamily domain KS242_03295 PF01037 Lrp/AsnC ligand binding domain KS242_03310 PF01235 Sodium:alanine symporter family KS242_03330 PF08924 Domain of unknown function (DUF1906) KS242_03330 PF01471 Putative peptidoglycan binding domain KS242_03370 PF02517 CPBP intramembrane metalloprotease KS242_03385 PF00166 Chaperonin 10 Kd subunit KS242_03390 PF00118 TCP-1/cpn60 chaperonin family KS242_03395 PF07286 Protein of unknown function (DUF1445) KS242_03400 PF01145 SPFH domain / Band 7 family KS242_03400 PF15975 Flotillin KS242_03405 PF00672 HAMP domain KS242_03405 PF02743 Cache domain KS242_03405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS242_03425 PF12733 Cadherin-like beta sandwich domain KS242_03425 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) KS242_03430 PF10672 S-adenosylmethionine-dependent methyltransferase KS242_03430 PF17785 PUA-like domain KS242_03435 PF07690 Major Facilitator Superfamily KS242_03440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS242_03440 PF05227 CHASE3 domain KS242_03440 PF00672 HAMP domain KS242_03445 PF02522 Aminoglycoside 3-N-acetyltransferase KS242_03485 PF06874 Firmicute fructose-1,6-bisphosphatase KS242_03490 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KS242_03490 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KS242_03510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KS242_03510 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KS242_03520 PF00583 Acetyltransferase (GNAT) family KS242_03530 PF01965 DJ-1/PfpI family KS242_03540 PF00596 Class II Aldolase and Adducin N-terminal domain KS242_03545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KS242_03545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KS242_03550 PF02610 L-arabinose isomerase KS242_03550 PF11762 L-arabinose isomerase C-terminal domain KS242_03565 PF00392 Bacterial regulatory proteins, gntR family KS242_03570 PF13416 Bacterial extracellular solute-binding protein KS242_03575 PF06964 Alpha-L-arabinofuranosidase C-terminal domain KS242_03580 PF00528 Binding-protein-dependent transport system inner membrane component KS242_03585 PF00528 Binding-protein-dependent transport system inner membrane component KS242_03590 PF04854 Protein of unknown function, DUF624 KS242_03595 PF06964 Alpha-L-arabinofuranosidase C-terminal domain KS242_03600 PF13685 Iron-containing alcohol dehydrogenase KS242_03605 PF13344 Haloacid dehalogenase-like hydrolase KS242_03610 PF04616 Glycosyl hydrolases family 43 KS242_03610 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain KS242_03620 PF07690 Major Facilitator Superfamily KS242_03630 PF01380 SIS domain KS242_03630 PF01418 Helix-turn-helix domain, rpiR family KS242_03635 PF00294 pfkB family carbohydrate kinase KS242_03640 PF00144 Beta-lactamase KS242_03665 PF04239 Protein of unknown function (DUF421) KS242_03670 PF07885 Ion channel KS242_03675 PF11553 Protein of unknown function (DUF3231) KS242_03680 PF02525 Flavodoxin-like fold KS242_03685 PF01638 HxlR-like helix-turn-helix KS242_03690 PF00296 Luciferase-like monooxygenase KS242_03695 PF03358 NADPH-dependent FMN reductase KS242_03725 PF00324 Amino acid permease KS242_03730 PF00324 Amino acid permease KS242_03735 PF01965 DJ-1/PfpI family KS242_03740 PF13460 NAD(P)H-binding KS242_03745 PF00970 Oxidoreductase FAD-binding domain KS242_03745 PF00175 Oxidoreductase NAD-binding domain KS242_03745 PF00042 Globin KS242_03750 PF02082 Transcriptional regulator KS242_03760 PF00672 HAMP domain KS242_03760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_03760 PF00512 His Kinase A (phospho-acceptor) domain KS242_03765 PF00072 Response regulator receiver domain KS242_03765 PF00486 Transcriptional regulatory protein, C terminal KS242_03770 PF12459 D-Ala-teichoic acid biosynthesis protein KS242_03775 PF13193 AMP-binding enzyme C-terminal domain KS242_03775 PF00501 AMP-binding enzyme KS242_03780 PF03062 MBOAT, membrane-bound O-acyltransferase family KS242_03785 PF00550 Phosphopantetheine attachment site KS242_03790 PF04914 DltD protein KS242_03800 PF13673 Acetyltransferase (GNAT) domain KS242_03805 PF00202 Aminotransferase class-III KS242_03810 PF00248 Aldo/keto reductase family KS242_03815 PF00440 Bacterial regulatory proteins, tetR family KS242_03815 PF13977 BetI-type transcriptional repressor, C-terminal KS242_03820 PF07690 Major Facilitator Superfamily KS242_03825 PF03703 Bacterial PH domain KS242_03855 PF02743 Cache domain KS242_03855 PF00672 HAMP domain KS242_03855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS242_03865 PF01520 N-acetylmuramoyl-L-alanine amidase KS242_03870 PF01520 N-acetylmuramoyl-L-alanine amidase KS242_03885 PF02080 TrkA-C domain KS242_03890 PF00999 Sodium/hydrogen exchanger family KS242_03895 PF07726 ATPase family associated with various cellular activities (AAA) KS242_03895 PF17863 AAA lid domain KS242_03900 PF01882 Protein of unknown function DUF58 KS242_03905 PF01841 Transglutaminase-like superfamily KS242_03905 PF13559 Domain of unknown function (DUF4129) KS242_03905 PF11992 Domain of unknown function (DUF3488) KS242_03910 PF00958 GMP synthase C terminal domain KS242_03910 PF02540 NAD synthase KS242_03910 PF00117 Glutamine amidotransferase class-I KS242_03915 PF06081 Aromatic acid exporter family member 1 KS242_03920 PF08245 Mur ligase middle domain KS242_03920 PF02875 Mur ligase family, glutamate ligase domain KS242_03920 PF01225 Mur ligase family, catalytic domain KS242_03925 PF00860 Permease family KS242_03935 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KS242_03940 PF14044 NETI protein KS242_03945 PF00731 AIR carboxylase KS242_03950 PF02222 ATP-grasp domain KS242_03950 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KS242_03955 PF10397 Adenylosuccinate lyase C-terminus KS242_03955 PF00206 Lyase KS242_03960 PF01259 SAICAR synthetase KS242_03965 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KS242_03975 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KS242_03975 PF02769 AIR synthase related protein, C-terminal domain KS242_03975 PF00586 AIR synthase related protein, N-terminal domain KS242_03980 PF00156 Phosphoribosyl transferase domain KS242_03985 PF02769 AIR synthase related protein, C-terminal domain KS242_03985 PF00586 AIR synthase related protein, N-terminal domain KS242_03990 PF00551 Formyl transferase KS242_03995 PF01808 AICARFT/IMPCHase bienzyme KS242_03995 PF02142 MGS-like domain KS242_04000 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KS242_04000 PF02843 Phosphoribosylglycinamide synthetase, C domain KS242_04000 PF02844 Phosphoribosylglycinamide synthetase, N domain KS242_04010 PF01371 Trp repressor protein KS242_04015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KS242_04015 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KS242_04020 PF01884 PcrB family KS242_04025 PF13361 UvrD-like helicase C-terminal domain KS242_04025 PF00580 UvrD/REP helicase N-terminal domain KS242_04030 PF01653 NAD-dependent DNA ligase adenylation domain KS242_04030 PF03120 NAD-dependent DNA ligase OB-fold domain KS242_04030 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KS242_04030 PF12826 Helix-hairpin-helix motif KS242_04030 PF00533 BRCA1 C Terminus (BRCT) domain KS242_04035 PF07537 CamS sex pheromone cAM373 precursor KS242_04040 PF18801 response regulator aspartate phosphatase H, N terminal KS242_04045 PF02686 Glu-tRNAGln amidotransferase C subunit KS242_04050 PF01425 Amidase KS242_04055 PF02934 GatB/GatE catalytic domain KS242_04055 PF02637 GatB domain KS242_04075 PF00781 Diacylglycerol kinase catalytic domain KS242_04080 PF01938 TRAM domain KS242_04080 PF05958 tRNA (Uracil-5-)-methyltransferase KS242_04085 PF01938 TRAM domain KS242_04085 PF05958 tRNA (Uracil-5-)-methyltransferase KS242_04120 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase KS242_04125 PF01207 Dihydrouridine synthase (Dus) KS242_04135 PF01381 Helix-turn-helix KS242_04145 PF03806 AbgT putative transporter family KS242_04150 PF05958 tRNA (Uracil-5-)-methyltransferase KS242_04150 PF01938 TRAM domain KS242_04155 PF08031 Berberine and berberine like KS242_04155 PF01565 FAD binding domain KS242_04160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS242_04160 PF08447 PAS fold KS242_04160 PF13426 PAS domain KS242_04170 PF00375 Sodium:dicarboxylate symporter family KS242_04190 PF00392 Bacterial regulatory proteins, gntR family KS242_04190 PF07702 UTRA domain KS242_04195 PF00367 phosphotransferase system, EIIB KS242_04195 PF02378 Phosphotransferase system, EIIC KS242_04195 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KS242_04200 PF00232 Glycosyl hydrolase family 1 KS242_04205 PF08241 Methyltransferase domain KS242_04220 PF02463 RecF/RecN/SMC N terminal domain KS242_04225 PF00583 Acetyltransferase (GNAT) family KS242_04250 PF08241 Methyltransferase domain KS242_04255 PF04715 Anthranilate synthase component I, N terminal region KS242_04255 PF00425 chorismate binding enzyme KS242_04260 PF00583 Acetyltransferase (GNAT) family KS242_04285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS242_04290 PF00171 Aldehyde dehydrogenase family KS242_04295 PF07883 Cupin domain KS242_04300 PF01839 FG-GAP repeat KS242_04300 PF18370 Rhamnogalacturonan I lyases beta-sheet domain KS242_04305 PF07687 Peptidase dimerisation domain KS242_04305 PF01546 Peptidase family M20/M25/M40 KS242_04315 PF00990 Diguanylate cyclase, GGDEF domain KS242_04320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS242_04320 PF03466 LysR substrate binding domain KS242_04325 PF00849 RNA pseudouridylate synthase KS242_04325 PF01479 S4 domain KS242_04350 PF07687 Peptidase dimerisation domain KS242_04350 PF01546 Peptidase family M20/M25/M40 KS242_04355 PF00939 Sodium:sulfate symporter transmembrane region KS242_04370 PF01544 CorA-like Mg2+ transporter protein KS242_04380 PF04794 YdjC-like protein KS242_04410 PF00188 Cysteine-rich secretory protein family KS242_04415 PF09350 Domain of unknown function (DUF1992) KS242_04420 PF00296 Luciferase-like monooxygenase KS242_04425 PF17676 LD-carboxypeptidase C-terminal domain KS242_04425 PF02016 LD-carboxypeptidase N-terminal domain KS242_04435 PF03631 Virulence factor BrkB KS242_04445 PF00497 Bacterial extracellular solute-binding proteins, family 3 KS242_04450 PF00497 Bacterial extracellular solute-binding proteins, family 3 KS242_04455 PF00528 Binding-protein-dependent transport system inner membrane component KS242_04460 PF07690 Major Facilitator Superfamily KS242_04470 PF14167 YfkD-like protein KS242_04480 PF01522 Polysaccharide deacetylase KS242_04485 PF00730 HhH-GPD superfamily base excision DNA repair protein KS242_04490 PF00501 AMP-binding enzyme KS242_04490 PF13193 AMP-binding enzyme C-terminal domain KS242_04495 PF17871 AAA lid domain KS242_04495 PF10431 C-terminal, D2-small domain, of ClpB protein KS242_04495 PF07724 AAA domain (Cdc48 subfamily) KS242_04495 PF00004 ATPase family associated with various cellular activities (AAA) KS242_04505 PF00005 ABC transporter KS242_04510 PF07702 UTRA domain KS242_04510 PF00392 Bacterial regulatory proteins, gntR family KS242_04515 PF10502 Signal peptidase, peptidase S26 KS242_04520 PF01501 Glycosyl transferase family 8 KS242_04525 PF13302 Acetyltransferase (GNAT) domain KS242_04545 PF01235 Sodium:alanine symporter family KS242_04575 PF00857 Isochorismatase family KS242_04580 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KS242_04580 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KS242_04580 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KS242_04585 PF01467 Cytidylyltransferase-like KS242_04595 PF13333 Integrase core domain KS242_04595 PF00665 Integrase core domain KS242_04610 PF00005 ABC transporter KS242_04610 PF02687 FtsX-like permease family KS242_04610 PF12704 MacB-like periplasmic core domain KS242_04655 PF00929 Exonuclease KS242_04655 PF14480 DNA polymerase III polC-type N-terminus I KS242_04655 PF02811 PHP domain KS242_04655 PF14579 Helix-hairpin-helix motif KS242_04655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KS242_04655 PF11490 DNA polymerase III polC-type N-terminus II KS242_04655 PF07733 Bacterial DNA polymerase III alpha NTPase domain KS242_04665 PF00664 ABC transporter transmembrane region KS242_04665 PF00005 ABC transporter KS242_04680 PF00884 Sulfatase KS242_04695 PF00107 Zinc-binding dehydrogenase KS242_04695 PF13823 Alcohol dehydrogenase GroES-associated KS242_04695 PF08240 Alcohol dehydrogenase GroES-like domain KS242_04700 PF01594 AI-2E family transporter KS242_04705 PF01370 NAD dependent epimerase/dehydratase family KS242_04705 PF08338 Domain of unknown function (DUF1731) KS242_04710 PF02631 RecX family KS242_04715 PF08838 Protein of unknown function (DUF1811) KS242_04725 PF14043 WVELL protein KS242_04730 PF04307 LexA-binding, inner membrane-associated putative hydrolase KS242_04735 PF00730 HhH-GPD superfamily base excision DNA repair protein KS242_04735 PF14815 NUDIX domain KS242_04745 PF04167 Protein of unknown function (DUF402) KS242_04750 PF00664 ABC transporter transmembrane region KS242_04750 PF00005 ABC transporter KS242_04755 PF06081 Aromatic acid exporter family member 1 KS242_04760 PF00202 Aminotransferase class-III KS242_04765 PF07885 Ion channel KS242_04770 PF00578 AhpC/TSA family KS242_04775 PF02073 Thermophilic metalloprotease (M29) KS242_04780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KS242_04785 PF01923 Cobalamin adenosyltransferase KS242_04790 PF01475 Ferric uptake regulator family KS242_04795 PF18576 Helix-turn-helix domain KS242_04795 PF14540 Nucleotidyltransferase-like KS242_04885 PF02554 Carbon starvation protein CstA KS242_04890 PF08240 Alcohol dehydrogenase GroES-like domain KS242_04890 PF00107 Zinc-binding dehydrogenase KS242_04910 PF00486 Transcriptional regulatory protein, C terminal KS242_04910 PF00072 Response regulator receiver domain KS242_04915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_04920 PF00005 ABC transporter KS242_04925 PF02687 FtsX-like permease family KS242_05000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS242_05005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KS242_05010 PF00248 Aldo/keto reductase family KS242_05015 PF01177 Asp/Glu/Hydantoin racemase KS242_05030 PF02872 5'-nucleotidase, C-terminal domain KS242_05030 PF00149 Calcineurin-like phosphoesterase KS242_05045 PF02733 Dak1 domain KS242_05060 PF03060 Nitronate monooxygenase KS242_05065 PF00293 NUDIX domain KS242_05075 PF00005 ABC transporter KS242_05075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KS242_05080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KS242_05080 PF00005 ABC transporter KS242_05085 PF00528 Binding-protein-dependent transport system inner membrane component KS242_05085 PF12911 N-terminal TM domain of oligopeptide transport permease C KS242_05090 PF00528 Binding-protein-dependent transport system inner membrane component KS242_05095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KS242_05100 PF07687 Peptidase dimerisation domain KS242_05100 PF01546 Peptidase family M20/M25/M40 KS242_05105 PF01053 Cys/Met metabolism PLP-dependent enzyme KS242_05110 PF01053 Cys/Met metabolism PLP-dependent enzyme KS242_05115 PF01717 Cobalamin-independent synthase, Catalytic domain KS242_05120 PF03099 Biotin/lipoate A/B protein ligase family KS242_05125 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KS242_05125 PF04055 Radical SAM superfamily KS242_05130 PF00892 EamA-like transporter family KS242_05135 PF07883 Cupin domain KS242_05135 PF12833 Helix-turn-helix domain KS242_05145 PF00106 short chain dehydrogenase KS242_05150 PF01680 SOR/SNZ family KS242_05155 PF01174 SNO glutamine amidotransferase family KS242_05160 PF00171 Aldehyde dehydrogenase family KS242_05165 PF00155 Aminotransferase class I and II KS242_05165 PF00392 Bacterial regulatory proteins, gntR family KS242_05180 PF03176 MMPL family KS242_05185 PF02566 OsmC-like protein KS242_05190 PF01047 MarR family KS242_05195 PF02378 Phosphotransferase system, EIIC KS242_05220 PF01740 STAS domain KS242_05225 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KS242_05225 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KS242_05230 PF00107 Zinc-binding dehydrogenase KS242_05230 PF08240 Alcohol dehydrogenase GroES-like domain KS242_05240 PF01740 STAS domain KS242_05240 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain KS242_05265 PF01654 Cytochrome bd terminal oxidase subunit I KS242_05270 PF02322 Cytochrome bd terminal oxidase subunit II KS242_05275 PF00005 ABC transporter KS242_05275 PF00664 ABC transporter transmembrane region KS242_05280 PF00664 ABC transporter transmembrane region KS242_05280 PF00005 ABC transporter KS242_05285 PF06800 Sugar transport protein KS242_05305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KS242_05310 PF09335 SNARE associated Golgi protein KS242_05315 PF01063 Amino-transferase class IV KS242_05320 PF08331 Domain of unknown function (DUF1730) KS242_05325 PF00881 Nitroreductase family KS242_05330 PF12671 Putative amidase domain KS242_05335 PF00588 SpoU rRNA Methylase family KS242_05340 PF01381 Helix-turn-helix KS242_05350 PF06798 PrkA serine protein kinase C-terminal domain KS242_05350 PF08298 PrkA AAA domain KS242_05355 PF01925 Sulfite exporter TauE/SafE KS242_05360 PF03466 LysR substrate binding domain KS242_05360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS242_05365 PF00149 Calcineurin-like phosphoesterase KS242_05370 PF16870 2-oxoglutarate dehydrogenase C-terminal KS242_05370 PF02779 Transketolase, pyrimidine binding domain KS242_05370 PF00676 Dehydrogenase E1 component KS242_05375 PF02817 e3 binding domain KS242_05375 PF00364 Biotin-requiring enzyme KS242_05375 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KS242_05380 PF03323 Bacillus/Clostridium GerA spore germination protein KS242_05385 PF03845 Spore germination protein KS242_05395 PF04285 Protein of unknown function (DUF444) KS242_05400 PF04101 Glycosyltransferase family 28 C-terminal domain KS242_05400 PF03033 Glycosyltransferase family 28 N-terminal domain KS242_05405 PF00484 Carbonic anhydrase KS242_05410 PF00664 ABC transporter transmembrane region KS242_05410 PF00005 ABC transporter KS242_05415 PF00664 ABC transporter transmembrane region KS242_05415 PF00005 ABC transporter KS242_05420 PF04542 Sigma-70 region 2 KS242_05425 PF12791 Anti-sigma factor N-terminus KS242_05430 PF00583 Acetyltransferase (GNAT) family KS242_05430 PF00795 Carbon-nitrogen hydrolase KS242_05435 PF14148 YhdB-like protein KS242_05440 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KS242_05445 PF01212 Beta-eliminating lyase KS242_05450 PF08241 Methyltransferase domain KS242_05455 PF02664 S-Ribosylhomocysteinase (LuxS) KS242_05460 PF00291 Pyridoxal-phosphate dependent enzyme KS242_05465 PF01053 Cys/Met metabolism PLP-dependent enzyme KS242_05475 PF01546 Peptidase family M20/M25/M40 KS242_05475 PF07687 Peptidase dimerisation domain KS242_05480 PF04293 SpoVR like protein KS242_05505 PF05724 Thiopurine S-methyltransferase (TPMT) KS242_05515 PF13529 Peptidase_C39 like family KS242_05520 PF03167 Uracil DNA glycosylase superfamily KS242_05525 PF00106 short chain dehydrogenase KS242_05530 PF09680 Family of unknown function KS242_05540 PF00005 ABC transporter KS242_05545 PF06146 Phosphate-starvation-inducible E KS242_05550 PF00557 Metallopeptidase family M24 KS242_05555 PF01545 Cation efflux family KS242_05555 PF16916 Dimerisation domain of Zinc Transporter KS242_05565 PF07690 Major Facilitator Superfamily KS242_05570 PF08858 IDEAL domain KS242_05570 PF08864 UPF0302 domain KS242_05575 PF02557 D-alanyl-D-alanine carboxypeptidase KS242_05580 PF00206 Lyase KS242_05580 PF10415 Fumarase C C-terminus KS242_05585 PF00269 Small, acid-soluble spore proteins, alpha/beta type KS242_05590 PF13556 PucR C-terminal helix-turn-helix domain KS242_05595 PF04286 Protein of unknown function (DUF445) KS242_05600 PF06133 Control of competence regulator ComK, YlbF/YmcA KS242_05605 PF00149 Calcineurin-like phosphoesterase KS242_05620 PF01336 OB-fold nucleic acid binding domain KS242_05620 PF01966 HD domain KS242_05625 PF07690 Major Facilitator Superfamily KS242_05630 PF14147 Sporulation protein YhaL KS242_05655 PF00005 ABC transporter KS242_05655 PF00571 CBS domain KS242_05660 PF00528 Binding-protein-dependent transport system inner membrane component KS242_05665 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KS242_05670 PF12732 YtxH-like protein KS242_05675 PF01230 HIT domain KS242_05680 PF00005 ABC transporter KS242_05685 PF05975 Bacterial ABC transporter protein EcsB KS242_05690 PF12787 EcsC protein family KS242_05695 PF01546 Peptidase family M20/M25/M40 KS242_05695 PF07687 Peptidase dimerisation domain KS242_05705 PF01569 PAP2 superfamily KS242_05710 PF03992 Antibiotic biosynthesis monooxygenase KS242_05715 PF00912 Transglycosylase KS242_05715 PF00905 Penicillin binding protein transpeptidase domain KS242_05720 PF01208 Uroporphyrinogen decarboxylase (URO-D) KS242_05725 PF00762 Ferrochelatase KS242_05730 PF01593 Flavin containing amine oxidoreductase KS242_05740 PF12706 Beta-lactamase superfamily domain KS242_05745 PF03099 Biotin/lipoate A/B protein ligase family KS242_05745 PF10437 Bacterial lipoate protein ligase C-terminus KS242_05750 PF16491 CAAX prenyl protease N-terminal, five membrane helices KS242_05750 PF01435 Peptidase family M48 KS242_05765 PF09335 SNARE associated Golgi protein KS242_05770 PF10502 Signal peptidase, peptidase S26 KS242_05775 PF12705 PD-(D/E)XK nuclease superfamily KS242_05780 PF12705 PD-(D/E)XK nuclease superfamily KS242_05780 PF00580 UvrD/REP helicase N-terminal domain KS242_05780 PF13361 UvrD-like helicase C-terminal domain KS242_05790 PF14542 GCN5-related N-acetyl-transferase KS242_05795 PF08000 Bacterial PH domain KS242_05795 PF11724 YvbH-like oligomerisation region KS242_05800 PF04235 Protein of unknown function (DUF418) KS242_05805 PF07457 Protein of unknown function (DUF1516) KS242_05810 PF00733 Asparagine synthase KS242_05810 PF13537 Glutamine amidotransferase domain KS242_05815 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KS242_05815 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KS242_05830 PF00990 Diguanylate cyclase, GGDEF domain KS242_05835 PF00072 Response regulator receiver domain KS242_05835 PF00486 Transcriptional regulatory protein, C terminal KS242_05840 PF13426 PAS domain KS242_05840 PF00512 His Kinase A (phospho-acceptor) domain KS242_05840 PF00672 HAMP domain KS242_05840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_05860 PF00326 Prolyl oligopeptidase family KS242_05865 PF01883 Iron-sulfur cluster assembly protein KS242_05890 PF00109 Beta-ketoacyl synthase, N-terminal domain KS242_05890 PF02801 Beta-ketoacyl synthase, C-terminal domain KS242_05895 PF12227 Protein of unknown function (DUF3603) KS242_05900 PF00579 tRNA synthetases class I (W and Y) KS242_05910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KS242_05915 PF00528 Binding-protein-dependent transport system inner membrane component KS242_05920 PF12911 N-terminal TM domain of oligopeptide transport permease C KS242_05920 PF00528 Binding-protein-dependent transport system inner membrane component KS242_05925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KS242_05925 PF00005 ABC transporter KS242_05930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KS242_05930 PF00005 ABC transporter KS242_05940 PF13508 Acetyltransferase (GNAT) domain KS242_05945 PF03960 ArsC family KS242_05950 PF05389 Negative regulator of genetic competence (MecA) KS242_05960 PF01432 Peptidase family M3 KS242_05960 PF08439 Oligopeptidase F KS242_05970 PF00561 alpha/beta hydrolase fold KS242_05980 PF01152 Bacterial-like globin KS242_05985 PF01928 CYTH domain KS242_05990 PF04607 Region found in RelA / SpoT proteins KS242_05995 PF01513 ATP-NAD kinase KS242_06000 PF00849 RNA pseudouridylate synthase KS242_06005 PF00149 Calcineurin-like phosphoesterase KS242_06010 PF01098 Cell cycle protein KS242_06015 PF03448 MgtE intracellular N domain KS242_06015 PF01769 Divalent cation transporter KS242_06015 PF00571 CBS domain KS242_06020 PF02080 TrkA-C domain KS242_06020 PF00999 Sodium/hydrogen exchanger family KS242_06020 PF02254 TrkA-N domain KS242_06045 PF04239 Protein of unknown function (DUF421) KS242_06050 PF13673 Acetyltransferase (GNAT) domain KS242_06060 PF00756 Putative esterase KS242_06065 PF00950 ABC 3 transport family KS242_06070 PF00950 ABC 3 transport family KS242_06075 PF00005 ABC transporter KS242_06090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KS242_06095 PF01522 Polysaccharide deacetylase KS242_06105 PF00535 Glycosyl transferase family 2 KS242_06120 PF07690 Major Facilitator Superfamily KS242_06125 PF00440 Bacterial regulatory proteins, tetR family KS242_06135 PF14659 Phage integrase, N-terminal SAM-like domain KS242_06135 PF00589 Phage integrase family KS242_06180 PF00574 Clp protease KS242_06225 PF01464 Transglycosylase SLT domain KS242_06275 PF13539 D-alanyl-D-alanine carboxypeptidase KS242_06290 PF01381 Helix-turn-helix KS242_06295 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KS242_06295 PF17854 FtsK alpha domain KS242_06295 PF09397 Ftsk gamma domain KS242_06295 PF01580 FtsK/SpoIIIE family KS242_06310 PF01381 Helix-turn-helix KS242_06365 PF00753 Metallo-beta-lactamase superfamily KS242_06380 PF00772 DnaB-like helicase N terminal domain KS242_06380 PF03796 DnaB-like helicase C terminal domain KS242_06425 PF14659 Phage integrase, N-terminal SAM-like domain KS242_06425 PF00589 Phage integrase family KS242_06430 PF06114 IrrE N-terminal-like domain KS242_06480 PF00144 Beta-lactamase KS242_06495 PF00561 alpha/beta hydrolase fold KS242_06500 PF00313 'Cold-shock' DNA-binding domain KS242_06510 PF00753 Metallo-beta-lactamase superfamily KS242_06530 PF00248 Aldo/keto reductase family KS242_06540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KS242_06560 PF04167 Protein of unknown function (DUF402) KS242_06575 PF12833 Helix-turn-helix domain KS242_06575 PF00072 Response regulator receiver domain KS242_06580 PF02743 Cache domain KS242_06580 PF00672 HAMP domain KS242_06580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_06580 PF06580 Histidine kinase KS242_06585 PF13416 Bacterial extracellular solute-binding protein KS242_06590 PF00528 Binding-protein-dependent transport system inner membrane component KS242_06595 PF00528 Binding-protein-dependent transport system inner membrane component KS242_06600 PF02837 Glycosyl hydrolases family 2, sugar binding domain KS242_06600 PF02929 Beta galactosidase small chain KS242_06600 PF16353 Domain of unknown function(DUF4981) KS242_06600 PF00703 Glycosyl hydrolases family 2 KS242_06600 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KS242_06610 PF00478 IMP dehydrogenase / GMP reductase domain KS242_06635 PF01266 FAD dependent oxidoreductase KS242_06645 PF00877 NlpC/P60 family KS242_06665 PF00313 'Cold-shock' DNA-binding domain KS242_06675 PF01975 Survival protein SurE KS242_06685 PF00528 Binding-protein-dependent transport system inner membrane component KS242_06690 PF00005 ABC transporter KS242_06690 PF08402 TOBE domain KS242_06695 PF10711 Hypothetical protein (DUF2513) KS242_06710 PF07486 Cell Wall Hydrolase KS242_06725 PF01047 MarR family KS242_06730 PF00881 Nitroreductase family KS242_06740 PF07875 Coat F domain KS242_06765 PF00893 Small Multidrug Resistance protein KS242_06770 PF00893 Small Multidrug Resistance protein KS242_06775 PF06013 Proteins of 100 residues with WXG KS242_06795 PF10140 WXG100 protein secretion system (Wss), protein YukC KS242_06800 PF01580 FtsK/SpoIIIE family KS242_06800 PF12538 DNA transporter KS242_06920 PF02586 SOS response associated peptidase (SRAP) KS242_06925 PF02361 Cobalt transport protein KS242_06930 PF00005 ABC transporter KS242_06935 PF09819 ABC-type cobalt transport system, permease component KS242_06940 PF07615 YKOF-related Family KS242_06945 PF00999 Sodium/hydrogen exchanger family KS242_06950 PF00156 Phosphoribosyl transferase domain KS242_06950 PF05139 Erythromycin esterase KS242_06965 PF08338 Domain of unknown function (DUF1731) KS242_06965 PF01370 NAD dependent epimerase/dehydratase family KS242_06980 PF07690 Major Facilitator Superfamily KS242_06990 PF00781 Diacylglycerol kinase catalytic domain KS242_06995 PF03816 Cell envelope-related transcriptional attenuator domain KS242_07010 PF00069 Protein kinase domain KS242_07025 PF00291 Pyridoxal-phosphate dependent enzyme KS242_07025 PF13291 ACT domain KS242_07030 PF00694 Aconitase C-terminal domain KS242_07035 PF00330 Aconitase family (aconitate hydratase) KS242_07040 PF00180 Isocitrate/isopropylmalate dehydrogenase KS242_07045 PF08502 LeuA allosteric (dimerisation) domain KS242_07045 PF00682 HMGL-like KS242_07050 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KS242_07050 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KS242_07055 PF01842 ACT domain KS242_07055 PF10369 Small subunit of acetolactate synthase KS242_07060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KS242_07060 PF00205 Thiamine pyrophosphate enzyme, central domain KS242_07060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KS242_07065 PF00920 Dehydratase family KS242_07080 PF00440 Bacterial regulatory proteins, tetR family KS242_07085 PF02028 BCCT, betaine/carnitine/choline family transporter KS242_07090 PF00005 ABC transporter KS242_07095 PF00854 POT family KS242_07100 PF09515 Thiamine transporter protein (Thia_YuaJ) KS242_07105 PF11181 Heat induced stress protein YflT KS242_07120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KS242_07120 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS242_07130 PF02386 Cation transport protein KS242_07145 PF00155 Aminotransferase class I and II KS242_07160 PF14177 YkyB-like protein KS242_07165 PF10518 TAT (twin-arginine translocation) pathway signal sequence KS242_07165 PF00149 Calcineurin-like phosphoesterase KS242_07170 PF03006 Haemolysin-III related KS242_07180 PF00132 Bacterial transferase hexapeptide (six repeats) KS242_07180 PF14602 Hexapeptide repeat of succinyl-transferase KS242_07180 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KS242_07185 PF07687 Peptidase dimerisation domain KS242_07185 PF01546 Peptidase family M20/M25/M40 KS242_07190 PF00924 Mechanosensitive ion channel KS242_07195 PF10417 C-terminal domain of 1-Cys peroxiredoxin KS242_07195 PF00578 AhpC/TSA family KS242_07205 PF02272 DHHA1 domain KS242_07205 PF01411 tRNA synthetases class II (A) KS242_07205 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KS242_07210 PF00664 ABC transporter transmembrane region KS242_07210 PF00005 ABC transporter KS242_07215 PF00664 ABC transporter transmembrane region KS242_07215 PF00005 ABC transporter KS242_07220 PF01654 Cytochrome bd terminal oxidase subunit I KS242_07225 PF02322 Cytochrome bd terminal oxidase subunit II KS242_07230 PF02254 TrkA-N domain KS242_07230 PF02080 TrkA-C domain KS242_07235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KS242_07235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KS242_07235 PF00205 Thiamine pyrophosphate enzyme, central domain KS242_07240 PF00753 Metallo-beta-lactamase superfamily KS242_07240 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KS242_07240 PF17770 Ribonuclease J C-terminal domain KS242_07245 PF07288 Protein of unknown function (DUF1447) KS242_07255 PF01327 Polypeptide deformylase KS242_07265 PF00676 Dehydrogenase E1 component KS242_07270 PF02779 Transketolase, pyrimidine binding domain KS242_07270 PF02780 Transketolase, C-terminal domain KS242_07275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KS242_07275 PF00364 Biotin-requiring enzyme KS242_07275 PF02817 e3 binding domain KS242_07280 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS242_07280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KS242_07295 PF02028 BCCT, betaine/carnitine/choline family transporter KS242_07300 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain KS242_07300 PF01522 Polysaccharide deacetylase KS242_07305 PF01276 Orn/Lys/Arg decarboxylase, major domain KS242_07305 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KS242_07310 PF05256 Uncharacterised protein family (UPF0223) KS242_07315 PF06335 Protein of unknown function (DUF1054) KS242_07325 PF00459 Inositol monophosphatase family KS242_07345 PF07408 Protein of unknown function (DUF1507) KS242_07350 PF01098 Cell cycle protein KS242_07355 PF02785 Biotin carboxylase C-terminal domain KS242_07355 PF00289 Biotin carboxylase, N-terminal domain KS242_07355 PF00364 Biotin-requiring enzyme KS242_07355 PF00682 HMGL-like KS242_07355 PF02436 Conserved carboxylase domain KS242_07355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KS242_07365 PF02628 Cytochrome oxidase assembly protein KS242_07370 PF01040 UbiA prenyltransferase family KS242_07380 PF00188 Cysteine-rich secretory protein family KS242_07380 PF14504 CAP-associated N-terminal KS242_07395 PF06133 Control of competence regulator ComK, YlbF/YmcA KS242_07400 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KS242_07410 PF01467 Cytidylyltransferase-like KS242_07415 PF07670 Nucleoside recognition KS242_07420 PF05362 Lon protease (S16) C-terminal proteolytic domain KS242_07420 PF13180 PDZ domain KS242_07425 PF05636 HIGH Nucleotidyl Transferase KS242_07430 PF02620 Large ribosomal RNA subunit accumulation protein YceD KS242_07435 PF01783 Ribosomal L32p protein family KS242_07465 PF10079 Bacillithiol biosynthesis BshC KS242_07470 PF02381 MraZ protein, putative antitoxin-like KS242_07475 PF01795 MraW methylase family KS242_07485 PF03793 PASTA domain KS242_07485 PF03717 Penicillin-binding Protein dimerisation domain KS242_07485 PF00905 Penicillin binding protein transpeptidase domain KS242_07490 PF00905 Penicillin binding protein transpeptidase domain KS242_07490 PF03793 PASTA domain KS242_07490 PF03717 Penicillin-binding Protein dimerisation domain KS242_07495 PF08245 Mur ligase middle domain KS242_07495 PF02875 Mur ligase family, glutamate ligase domain KS242_07495 PF01225 Mur ligase family, catalytic domain KS242_07500 PF08245 Mur ligase middle domain KS242_07500 PF02875 Mur ligase family, glutamate ligase domain KS242_07500 PF01225 Mur ligase family, catalytic domain KS242_07505 PF00953 Glycosyl transferase family 4 KS242_07510 PF02875 Mur ligase family, glutamate ligase domain KS242_07510 PF08245 Mur ligase middle domain KS242_07515 PF01098 Cell cycle protein KS242_07520 PF03358 NADPH-dependent FMN reductase KS242_07525 PF07690 Major Facilitator Superfamily KS242_07530 PF00296 Luciferase-like monooxygenase KS242_07535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KS242_07535 PF02770 Acyl-CoA dehydrogenase, middle domain KS242_07535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KS242_07540 PF08478 POTRA domain, FtsQ-type KS242_07545 PF02491 SHS2 domain inserted in FTSA KS242_07550 PF12327 FtsZ family, C-terminal domain KS242_07550 PF00091 Tubulin/FtsZ family, GTPase domain KS242_07555 PF03419 Sporulation factor SpoIIGA KS242_07560 PF04542 Sigma-70 region 2 KS242_07560 PF04545 Sigma-70, region 4 KS242_07565 PF04545 Sigma-70, region 4 KS242_07565 PF04539 Sigma-70 region 3 KS242_07565 PF04542 Sigma-70 region 2 KS242_07570 PF05239 PRC-barrel domain KS242_07575 PF02578 Multi-copper polyphenol oxidoreductase laccase KS242_07580 PF01168 Alanine racemase, N-terminal domain KS242_07585 PF04472 Cell division protein SepF KS242_07590 PF02325 YGGT family KS242_07595 PF17774 Putative RNA-binding domain in YlmH KS242_07595 PF01479 S4 domain KS242_07600 PF05103 DivIVA protein KS242_07605 PF06827 Zinc finger found in FPG and IleRS KS242_07605 PF00133 tRNA synthetases class I (I, L, M and V) KS242_07605 PF08264 Anticodon-binding domain of tRNA KS242_07610 PF01252 Signal peptidase (SPase) II KS242_07615 PF00849 RNA pseudouridylate synthase KS242_07615 PF01479 S4 domain KS242_07620 PF00156 Phosphoribosyl transferase domain KS242_07625 PF00860 Permease family KS242_07630 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KS242_07630 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KS242_07635 PF01979 Amidohydrolase family KS242_07640 PF00117 Glutamine amidotransferase class-I KS242_07640 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KS242_07645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KS242_07645 PF02142 MGS-like domain KS242_07645 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KS242_07650 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KS242_07650 PF00175 Oxidoreductase NAD-binding domain KS242_07655 PF01180 Dihydroorotate dehydrogenase KS242_07660 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KS242_07665 PF00156 Phosphoribosyl transferase domain KS242_07680 PF07662 Na+ dependent nucleoside transporter C-terminus KS242_07680 PF01773 Na+ dependent nucleoside transporter N-terminus KS242_07690 PF05670 NFACT protein RNA binding domain KS242_07695 PF00689 Cation transporting ATPase, C-terminus KS242_07695 PF00690 Cation transporter/ATPase, N-terminus KS242_07700 PF00293 NUDIX domain KS242_07700 PF13344 Haloacid dehalogenase-like hydrolase KS242_07715 PF08340 Domain of unknown function (DUF1732) KS242_07715 PF03755 YicC-like family, N-terminal region KS242_07720 PF04025 Domain of unknown function (DUF370) KS242_07725 PF00625 Guanylate kinase KS242_07730 PF01192 RNA polymerase Rpb6 KS242_07735 PF04127 DNA / pantothenate metabolism flavoprotein KS242_07735 PF02441 Flavoprotein KS242_07740 PF04851 Type III restriction enzyme, res subunit KS242_07740 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KS242_07740 PF17764 3′ DNA-binding domain (3′BD) KS242_07740 PF18074 Primosomal protein N C-terminal domain KS242_07740 PF00271 Helicase conserved C-terminal domain KS242_07745 PF02911 Formyl transferase, C-terminal domain KS242_07745 PF00551 Formyl transferase KS242_07750 PF01189 16S rRNA methyltransferase RsmB/F KS242_07750 PF01029 NusB family KS242_07760 PF03793 PASTA domain KS242_07760 PF00069 Protein kinase domain KS242_07765 PF16745 RsgA N-terminal domain KS242_07765 PF03193 RsgA GTPase KS242_07770 PF00834 Ribulose-phosphate 3 epimerase family KS242_07775 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KS242_07775 PF04263 Thiamin pyrophosphokinase, catalytic domain KS242_07780 PF08183 Stage V sporulation protein family KS242_07785 PF00830 Ribosomal L28 family KS242_07790 PF03780 Asp23 family, cell envelope-related function KS242_07795 PF13684 Dihydroxyacetone kinase family KS242_07795 PF02734 DAK2 domain KS242_07800 PF01842 ACT domain KS242_07800 PF03315 Serine dehydratase beta chain KS242_07805 PF03313 Serine dehydratase alpha chain KS242_07810 PF00270 DEAD/DEAH box helicase KS242_07810 PF00271 Helicase conserved C-terminal domain KS242_07810 PF17191 RecG wedge domain KS242_07815 PF03061 Thioesterase superfamily KS242_07820 PF02504 Fatty acid synthesis protein KS242_07825 PF00698 Acyl transferase domain KS242_07835 PF00550 Phosphopantetheine attachment site KS242_07840 PF00035 Double-stranded RNA binding motif KS242_07840 PF14622 Ribonuclease-III-like KS242_07845 PF06569 Protein of unknown function (DUF1128) KS242_07850 PF06470 SMC proteins Flexible Hinge Domain KS242_07850 PF02463 RecF/RecN/SMC N terminal domain KS242_07855 PF00448 SRP54-type protein, GTPase domain KS242_07855 PF02881 SRP54-type protein, helical bundle domain KS242_07860 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KS242_07865 PF00448 SRP54-type protein, GTPase domain KS242_07865 PF02881 SRP54-type protein, helical bundle domain KS242_07865 PF02978 Signal peptide binding domain KS242_07870 PF00886 Ribosomal protein S16 KS242_07885 PF05239 PRC-barrel domain KS242_07885 PF01782 RimM N-terminal domain KS242_07890 PF01746 tRNA (Guanine-1)-methyltransferase KS242_07895 PF01245 Ribosomal protein L19 KS242_07900 PF10502 Signal peptidase, peptidase S26 KS242_07905 PF01926 50S ribosome-binding GTPase KS242_07910 PF01351 Ribonuclease HII KS242_07920 PF01312 FlhB HrpN YscU SpaS Family KS242_07925 PF08442 ATP-grasp domain KS242_07925 PF00549 CoA-ligase KS242_07930 PF02629 CoA binding domain KS242_07930 PF00549 CoA-ligase KS242_07935 PF02481 DNA recombination-mediator protein A KS242_07940 PF01131 DNA topoisomerase KS242_07940 PF01751 Toprim domain KS242_07940 PF01396 Topoisomerase DNA binding C4 zinc finger KS242_07945 PF02899 Phage integrase, N-terminal SAM-like domain KS242_07945 PF00589 Phage integrase family KS242_07950 PF00227 Proteasome subunit KS242_07955 PF10431 C-terminal, D2-small domain, of ClpB protein KS242_07955 PF07724 AAA domain (Cdc48 subfamily) KS242_07955 PF00004 ATPase family associated with various cellular activities (AAA) KS242_07960 PF06018 CodY GAF-like domain KS242_07960 PF08222 CodY helix-turn-helix domain KS242_07965 PF00460 Flagella basal body rod protein KS242_07970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KS242_07970 PF00460 Flagella basal body rod protein KS242_07975 PF02049 Flagellar hook-basal body complex protein FliE KS242_07980 PF01514 Secretory protein of YscJ/FliF family KS242_07980 PF08345 Flagellar M-ring protein C-terminal KS242_07985 PF01706 FliG C-terminal domain KS242_07985 PF14841 FliG middle domain KS242_07985 PF14842 FliG N-terminal domain KS242_07990 PF02108 Flagellar assembly protein FliH KS242_07995 PF18269 T3SS EscN ATPase C-terminal domain KS242_07995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KS242_07995 PF02874 ATP synthase alpha/beta family, beta-barrel domain KS242_08000 PF02050 Flagellar FliJ protein KS242_08015 PF03963 Flagellar hook capping protein - N-terminal region KS242_08020 PF00460 Flagella basal body rod protein KS242_08020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KS242_08025 PF06289 Flagellar and Swarming motility proteins KS242_08035 PF02154 Flagellar motor switch protein FliM KS242_08035 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KS242_08040 PF04509 CheC-like family KS242_08040 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KS242_08045 PF00072 Response regulator receiver domain KS242_08050 PF04347 Flagellar biosynthesis protein, FliO KS242_08055 PF00813 FliP family KS242_08060 PF01313 Bacterial export proteins, family 3 KS242_08065 PF01311 Bacterial export proteins, family 1 KS242_08070 PF01312 FlhB HrpN YscU SpaS Family KS242_08080 PF00448 SRP54-type protein, GTPase domain KS242_08085 PF10609 NUBPL iron-transfer P-loop NTPase KS242_08090 PF00072 Response regulator receiver domain KS242_08090 PF01339 CheB methylesterase KS242_08095 PF07194 P2 response regulator binding domain KS242_08095 PF01627 Hpt domain KS242_08095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_08095 PF02895 Signal transducing histidine kinase, homodimeric domain KS242_08095 PF01584 CheW-like domain KS242_08100 PF01584 CheW-like domain KS242_08105 PF04509 CheC-like family KS242_08110 PF03975 CheD chemotactic sensory transduction KS242_08115 PF04539 Sigma-70 region 3 KS242_08115 PF04545 Sigma-70, region 4 KS242_08115 PF04542 Sigma-70 region 2 KS242_08125 PF00318 Ribosomal protein S2 KS242_08130 PF00889 Elongation factor TS KS242_08135 PF00696 Amino acid kinase family KS242_08140 PF01765 Ribosome recycling factor KS242_08145 PF01255 Putative undecaprenyl diphosphate synthase KS242_08155 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KS242_08155 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KS242_08155 PF13288 DXP reductoisomerase C-terminal domain KS242_08160 PF17820 PDZ domain KS242_08160 PF02163 Peptidase family M50 KS242_08165 PF04073 Aminoacyl-tRNA editing domain KS242_08165 PF03129 Anticodon binding domain KS242_08165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KS242_08170 PF14480 DNA polymerase III polC-type N-terminus I KS242_08170 PF11490 DNA polymerase III polC-type N-terminus II KS242_08170 PF07733 Bacterial DNA polymerase III alpha NTPase domain KS242_08170 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KS242_08170 PF14579 Helix-hairpin-helix motif KS242_08170 PF02811 PHP domain KS242_08170 PF00929 Exonuclease KS242_08170 PF01336 OB-fold nucleic acid binding domain KS242_08175 PF17384 RimP C-terminal SH3 domain KS242_08175 PF02576 RimP N-terminal domain KS242_08180 PF13184 NusA-like KH domain KS242_08180 PF08529 NusA N-terminal domain KS242_08180 PF00575 S1 RNA binding domain KS242_08185 PF04296 Protein of unknown function (DUF448) KS242_08195 PF00009 Elongation factor Tu GTP binding domain KS242_08195 PF11987 Translation-initiation factor 2 KS242_08195 PF04760 Translation initiation factor IF-2, N-terminal region KS242_08205 PF02033 Ribosome-binding factor A KS242_08210 PF16198 tRNA pseudouridylate synthase B C-terminal domain KS242_08210 PF01509 TruB family pseudouridylate synthase (N terminal domain) KS242_08215 PF06574 FAD synthetase KS242_08215 PF01687 Riboflavin kinase KS242_08220 PF00312 Ribosomal protein S15 KS242_08225 PF01138 3' exoribonuclease family, domain 1 KS242_08225 PF03725 3' exoribonuclease family, domain 2 KS242_08225 PF00575 S1 RNA binding domain KS242_08225 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KS242_08225 PF00013 KH domain KS242_08230 PF01522 Polysaccharide deacetylase KS242_08235 PF00675 Insulinase (Peptidase family M16) KS242_08235 PF05193 Peptidase M16 inactive domain KS242_08240 PF05239 PRC-barrel domain KS242_08245 PF16924 Dipicolinate synthase subunit A N-terminal domain KS242_08245 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KS242_08250 PF02441 Flavoprotein KS242_08255 PF01118 Semialdehyde dehydrogenase, NAD binding domain KS242_08255 PF02774 Semialdehyde dehydrogenase, dimerisation domain KS242_08260 PF00696 Amino acid kinase family KS242_08260 PF13840 ACT domain KS242_08265 PF00701 Dihydrodipicolinate synthetase family KS242_08270 PF00574 Clp protease KS242_08280 PF01580 FtsK/SpoIIIE family KS242_08280 PF17854 FtsK alpha domain KS242_08280 PF09397 Ftsk gamma domain KS242_08285 PF02608 ABC transporter substrate-binding protein PnrA-like KS242_08290 PF00005 ABC transporter KS242_08295 PF02653 Branched-chain amino acid transport system / permease component KS242_08300 PF02653 Branched-chain amino acid transport system / permease component KS242_08305 PF05193 Peptidase M16 inactive domain KS242_08310 PF05193 Peptidase M16 inactive domain KS242_08310 PF00675 Insulinase (Peptidase family M16) KS242_08320 PF11588 Protein of unknown function (DUF3243) KS242_08325 PF11868 Protein of unknown function (DUF3388) KS242_08330 PF13464 Domain of unknown function (DUF4115) KS242_08335 PF01066 CDP-alcohol phosphatidyltransferase KS242_08340 PF00994 Probable molybdopterin binding domain KS242_08340 PF02464 Competence-damaged protein KS242_08340 PF18146 Damage-inducible protein CinA KH domain KS242_08345 PF00154 recA bacterial DNA recombination protein KS242_08350 PF01966 HD domain KS242_08350 PF00013 KH domain KS242_08350 PF12072 Domain of unknown function (DUF3552) KS242_08355 PF13277 YmdB-like protein KS242_08360 PF04232 Stage V sporulation protein S (SpoVS) KS242_08365 PF04055 Radical SAM superfamily KS242_08365 PF00919 Uncharacterized protein family UPF0004 KS242_08365 PF01938 TRAM domain KS242_08370 PF06133 Control of competence regulator ComK, YlbF/YmcA KS242_08375 PF10628 Outer spore coat protein E (CotE) KS242_08380 PF05192 MutS domain III KS242_08380 PF01624 MutS domain I KS242_08380 PF05188 MutS domain II KS242_08380 PF05190 MutS family domain IV KS242_08380 PF00488 MutS domain V KS242_08385 PF08676 MutL C terminal dimerisation domain KS242_08385 PF01119 DNA mismatch repair protein, C-terminal domain KS242_08390 PF01551 Peptidase family M23 KS242_08390 PF04225 Opacity-associated protein A LysM-like domain KS242_08395 PF00210 Ferritin-like domain KS242_08405 PF17209 Hfq protein KS242_08410 PF00004 ATPase family associated with various cellular activities (AAA) KS242_08410 PF17866 AAA lid domain KS242_08415 PF03323 Bacillus/Clostridium GerA spore germination protein KS242_08420 PF03845 Spore germination protein KS242_08425 PF05504 Spore germination B3/ GerAC like, C-terminal KS242_08430 PF13167 GTP-binding GTPase N-terminal KS242_08430 PF16360 GTP-binding GTPase Middle Region KS242_08430 PF01926 50S ribosome-binding GTPase KS242_08435 PF06838 Methionine gamma-lyase KS242_08440 PF13411 MerR HTH family regulatory protein KS242_08445 PF00120 Glutamine synthetase, catalytic domain KS242_08445 PF03951 Glutamine synthetase, beta-Grasp domain KS242_08450 PF13539 D-alanyl-D-alanine carboxypeptidase KS242_08470 PF01726 LexA DNA binding domain KS242_08470 PF00717 Peptidase S24-like KS242_08475 PF00239 Resolvase, N terminal domain KS242_08480 PF05979 Bacterial protein of unknown function (DUF896) KS242_08485 PF02780 Transketolase, C-terminal domain KS242_08485 PF00456 Transketolase, thiamine diphosphate binding domain KS242_08485 PF02779 Transketolase, pyrimidine binding domain KS242_08495 PF03672 Uncharacterised protein family (UPF0154) KS242_08530 PF10710 Protein of unknown function (DUF2512) KS242_08535 PF02683 Cytochrome C biogenesis protein transmembrane region KS242_08540 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KS242_08545 PF00072 Response regulator receiver domain KS242_08550 PF07301 Protein of unknown function (DUF1453) KS242_08555 PF08447 PAS fold KS242_08555 PF00512 His Kinase A (phospho-acceptor) domain KS242_08555 PF00989 PAS fold KS242_08555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_08560 PF08179 Small acid-soluble spore protein P family KS242_08565 PF00330 Aconitase family (aconitate hydratase) KS242_08565 PF00694 Aconitase C-terminal domain KS242_08575 PF17866 AAA lid domain KS242_08575 PF00004 ATPase family associated with various cellular activities (AAA) KS242_08580 PF03061 Thioesterase superfamily KS242_08590 PF01809 Putative membrane protein insertion efficiency factor KS242_08595 PF02649 Type I GTP cyclohydrolase folE2 KS242_08600 PF02660 Glycerol-3-phosphate acyltransferase KS242_08605 PF00005 ABC transporter KS242_08605 PF00571 CBS domain KS242_08610 PF00528 Binding-protein-dependent transport system inner membrane component KS242_08615 PF13380 CoA binding domain KS242_08620 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KS242_08625 PF00204 DNA gyrase B KS242_08625 PF00986 DNA gyrase B subunit, carboxyl terminus KS242_08625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_08625 PF01751 Toprim domain KS242_08630 PF00521 DNA gyrase/topoisomerase IV, subunit A KS242_08630 PF03989 DNA gyrase C-terminal domain, beta-propeller KS242_08635 PF01613 Flavin reductase like domain KS242_08640 PF00072 Response regulator receiver domain KS242_08640 PF00486 Transcriptional regulatory protein, C terminal KS242_08645 PF00512 His Kinase A (phospho-acceptor) domain KS242_08645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_08645 PF00672 HAMP domain KS242_08675 PF00350 Dynamin family KS242_08680 PF01266 FAD dependent oxidoreductase KS242_08680 PF00355 Rieske [2Fe-2S] domain KS242_08715 PF02811 PHP domain KS242_08720 PF13393 Histidyl-tRNA synthetase KS242_08725 PF01634 ATP phosphoribosyltransferase KS242_08730 PF00815 Histidinol dehydrogenase KS242_08735 PF00475 Imidazoleglycerol-phosphate dehydratase KS242_08740 PF00117 Glutamine amidotransferase class-I KS242_08745 PF00977 Histidine biosynthesis protein KS242_08750 PF01502 Phosphoribosyl-AMP cyclohydrolase KS242_08750 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KS242_08775 PF00199 Catalase KS242_08775 PF06628 Catalase-related immune-responsive KS242_08790 PF02073 Thermophilic metalloprotease (M29) KS242_08800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KS242_08815 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KS242_08825 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KS242_08825 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KS242_08830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KS242_08830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KS242_08835 PF00248 Aldo/keto reductase family KS242_08840 PF00296 Luciferase-like monooxygenase KS242_08845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS242_08845 PF03466 LysR substrate binding domain KS242_08850 PF03358 NADPH-dependent FMN reductase KS242_08855 PF00296 Luciferase-like monooxygenase KS242_08860 PF00462 Glutaredoxin KS242_08865 PF00583 Acetyltransferase (GNAT) family KS242_08870 PF00528 Binding-protein-dependent transport system inner membrane component KS242_08880 PF00528 Binding-protein-dependent transport system inner membrane component KS242_08885 PF00005 ABC transporter KS242_08890 PF17853 GGDEF-like domain KS242_08890 PF12833 Helix-turn-helix domain KS242_08895 PF00296 Luciferase-like monooxygenase KS242_08900 PF01625 Peptide methionine sulfoxide reductase KS242_08905 PF01367 5'-3' exonuclease, C-terminal SAM fold KS242_08905 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KS242_08910 PF03466 LysR substrate binding domain KS242_08910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS242_08915 PF00310 Glutamine amidotransferases class-II KS242_08915 PF04898 Glutamate synthase central domain KS242_08915 PF01645 Conserved region in glutamate synthase KS242_08915 PF01493 GXGXG motif KS242_08920 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS242_08920 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KS242_08925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS242_08935 PF01063 Amino-transferase class IV KS242_08940 PF00144 Beta-lactamase KS242_08945 PF00696 Amino acid kinase family KS242_08945 PF01472 PUA domain KS242_08955 PF13249 Squalene-hopene cyclase N-terminal domain KS242_08955 PF13243 Squalene-hopene cyclase C-terminal domain KS242_08960 PF08240 Alcohol dehydrogenase GroES-like domain KS242_08960 PF00107 Zinc-binding dehydrogenase KS242_08965 PF03372 Endonuclease/Exonuclease/phosphatase family KS242_08970 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family KS242_08985 PF13847 Methyltransferase domain KS242_08985 PF03551 Transcriptional regulator PadR-like family KS242_09000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KS242_09005 PF00571 CBS domain KS242_09005 PF00478 IMP dehydrogenase / GMP reductase domain KS242_09010 PF01751 Toprim domain KS242_09010 PF01131 DNA topoisomerase KS242_09020 PF00072 Response regulator receiver domain KS242_09020 PF01966 HD domain KS242_09025 PF00933 Glycosyl hydrolase family 3 N terminal domain KS242_09025 PF01915 Glycosyl hydrolase family 3 C-terminal domain KS242_09025 PF14310 Fibronectin type III-like domain KS242_09030 PF05525 Branched-chain amino acid transport protein KS242_09045 PF01943 Polysaccharide biosynthesis protein KS242_09045 PF14667 Polysaccharide biosynthesis C-terminal domain KS242_09060 PF01546 Peptidase family M20/M25/M40 KS242_09065 PF00005 ABC transporter KS242_09065 PF12848 ABC transporter KS242_09075 PF14765 Polyketide synthase dehydratase KS242_09075 PF00698 Acyl transferase domain KS242_09075 PF08240 Alcohol dehydrogenase GroES-like domain KS242_09075 PF08659 KR domain KS242_09075 PF00550 Phosphopantetheine attachment site KS242_09080 PF13439 Glycosyltransferase Family 4 KS242_09080 PF00534 Glycosyl transferases group 1 KS242_09090 PF00355 Rieske [2Fe-2S] domain KS242_09090 PF01266 FAD dependent oxidoreductase KS242_09095 PF00708 Acylphosphatase KS242_09100 PF00355 Rieske [2Fe-2S] domain KS242_09100 PF01266 FAD dependent oxidoreductase KS242_09105 PF00037 4Fe-4S binding domain KS242_09110 PF01476 LysM domain KS242_09110 PF00246 Zinc carboxypeptidase KS242_09125 PF05145 Transition state regulatory protein AbrB KS242_09130 PF03741 Integral membrane protein TerC family KS242_09135 PF01625 Peptide methionine sulfoxide reductase KS242_09135 PF01641 SelR domain KS242_09150 PF13476 AAA domain KS242_09155 PF12320 Type 5 capsule protein repressor C-terminal domain KS242_09155 PF00149 Calcineurin-like phosphoesterase KS242_09160 PF08892 YqcI/YcgG family KS242_09170 PF08863 YolD-like protein KS242_09175 PF00375 Sodium:dicarboxylate symporter family KS242_09180 PF00884 Sulfatase KS242_09190 PF02660 Glycerol-3-phosphate acyltransferase KS242_09195 PF06855 YozE SAM-like fold KS242_09200 PF00186 Dihydrofolate reductase KS242_09205 PF00303 Thymidylate synthase KS242_09210 PF01966 HD domain KS242_09215 PF01904 Protein of unknown function DUF72 KS242_09220 PF00313 'Cold-shock' DNA-binding domain KS242_09225 PF02592 Putative vitamin uptake transporter KS242_09230 PF13456 Reverse transcriptase-like KS242_09245 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KS242_09250 PF02926 THUMP domain KS242_09250 PF01170 Putative RNA methylase family UPF0020 KS242_09260 PF05103 DivIVA protein KS242_09265 PF06908 YspA SLOG family KS242_09270 PF11122 Inner spore coat protein D KS242_09275 PF01070 FMN-dependent dehydrogenase KS242_09280 PF01593 Flavin containing amine oxidoreductase KS242_09285 PF00535 Glycosyl transferase family 2 KS242_09305 PF01593 Flavin containing amine oxidoreductase KS242_09310 PF01593 Flavin containing amine oxidoreductase KS242_09315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KS242_09335 PF10720 Protein of unknown function (DUF2515) KS242_09340 PF03838 Recombination protein U KS242_09345 PF00905 Penicillin binding protein transpeptidase domain KS242_09345 PF00912 Transglycosylase KS242_09350 PF10576 Iron-sulfur binding domain of endonuclease III KS242_09350 PF00730 HhH-GPD superfamily base excision DNA repair protein KS242_09350 PF00633 Helix-hairpin-helix motif KS242_09355 PF07261 Replication initiation and membrane attachment KS242_09360 PF01336 OB-fold nucleic acid binding domain KS242_09360 PF00152 tRNA synthetases class II (D, K and N) KS242_09370 PF14084 Protein of unknown function (DUF4264) KS242_09375 PF00929 Exonuclease KS242_09375 PF13307 Helicase C-terminal domain KS242_09375 PF04851 Type III restriction enzyme, res subunit KS242_09380 PF02261 Aspartate decarboxylase KS242_09385 PF02569 Pantoate-beta-alanine ligase KS242_09390 PF02548 Ketopantoate hydroxymethyltransferase KS242_09395 PF08279 HTH domain KS242_09395 PF03099 Biotin/lipoate A/B protein ligase family KS242_09395 PF02237 Biotin protein ligase C terminal domain KS242_09400 PF01743 Poly A polymerase head domain KS242_09400 PF12627 Probable RNA and SrmB- binding site of polymerase A KS242_09400 PF13735 tRNA nucleotidyltransferase domain 2 putative KS242_09405 PF00534 Glycosyl transferases group 1 KS242_09405 PF13439 Glycosyltransferase Family 4 KS242_09410 PF02142 MGS-like domain KS242_09415 PF01113 Dihydrodipicolinate reductase, N-terminus KS242_09415 PF05173 Dihydrodipicolinate reductase, C-terminus KS242_09420 PF03819 MazG nucleotide pyrophosphohydrolase domain KS242_09425 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KS242_09425 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KS242_09430 PF01965 DJ-1/PfpI family KS242_09440 PF04298 Putative neutral zinc metallopeptidase KS242_09450 PF07187 Protein of unknown function (DUF1405) KS242_09455 PF08858 IDEAL domain KS242_09455 PF08864 UPF0302 domain KS242_09465 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KS242_09470 PF01842 ACT domain KS242_09470 PF02153 Prephenate dehydrogenase KS242_09475 PF00155 Aminotransferase class I and II KS242_09480 PF07736 Chorismate mutase type I KS242_09485 PF01761 3-dehydroquinate synthase KS242_09490 PF01264 Chorismate synthase KS242_09495 PF13411 MerR HTH family regulatory protein KS242_09505 PF03705 CheR methyltransferase, all-alpha domain KS242_09505 PF01739 CheR methyltransferase, SAM binding domain KS242_09510 PF00334 Nucleoside diphosphate kinase KS242_09515 PF00348 Polyprenyl synthetase KS242_09520 PF01209 ubiE/COQ5 methyltransferase family KS242_09525 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 KS242_09530 PF00216 Bacterial DNA-binding protein KS242_09535 PF09547 Stage IV sporulation protein A (spore_IV_A) KS242_09545 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KS242_09545 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KS242_09550 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KS242_09550 PF01926 50S ribosome-binding GTPase KS242_09560 PF00575 S1 RNA binding domain KS242_09565 PF01553 Acyltransferase KS242_09570 PF02224 Cytidylate kinase KS242_09580 PF03413 Peptidase propeptide and YPEB domain KS242_09580 PF14620 YpeB sporulation KS242_09585 PF07486 Cell Wall Hydrolase KS242_09585 PF01471 Putative peptidoglycan binding domain KS242_09590 PF13367 PrsW family intramembrane metalloprotease KS242_09595 PF00710 Asparaginase, N-terminal KS242_09595 PF17763 Glutaminase/Asparaginase C-terminal domain KS242_09605 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KS242_09605 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KS242_09610 PF05389 Negative regulator of genetic competence (MecA) KS242_09620 PF00270 DEAD/DEAH box helicase KS242_09620 PF00271 Helicase conserved C-terminal domain KS242_09645 PF00672 HAMP domain KS242_09645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_09645 PF18698 Histidine kinase sensor domain KS242_09645 PF00512 His Kinase A (phospho-acceptor) domain KS242_09645 PF00989 PAS fold KS242_09650 PF00072 Response regulator receiver domain KS242_09650 PF00486 Transcriptional regulatory protein, C terminal KS242_09655 PF01578 Cytochrome C assembly protein KS242_09660 PF05140 ResB-like family KS242_09665 PF00578 AhpC/TSA family KS242_09670 PF00849 RNA pseudouridylate synthase KS242_09670 PF01479 S4 domain KS242_09675 PF07670 Nucleoside recognition KS242_09680 PF07670 Nucleoside recognition KS242_09685 PF07943 Penicillin-binding protein 5, C-terminal domain KS242_09685 PF00768 D-alanyl-D-alanine carboxypeptidase KS242_09690 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KS242_09690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KS242_09695 PF04079 Segregation and condensation complex subunit ScpB KS242_09700 PF02616 Segregation and condensation protein ScpA KS242_09710 PF00583 Acetyltransferase (GNAT) family KS242_09715 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KS242_09720 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KS242_09720 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KS242_09725 PF03323 Bacillus/Clostridium GerA spore germination protein KS242_09730 PF14097 Stage V sporulation protein AE1 KS242_09735 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KS242_09740 PF07451 Stage V sporulation protein AD (SpoVAD) KS242_09745 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KS242_09750 PF13782 Stage V sporulation protein AB KS242_09755 PF12164 Stage V sporulation protein AA KS242_09760 PF04539 Sigma-70 region 3 KS242_09760 PF04542 Sigma-70 region 2 KS242_09760 PF04545 Sigma-70, region 4 KS242_09765 PF13581 Histidine kinase-like ATPase domain KS242_09770 PF01740 STAS domain KS242_09775 PF07943 Penicillin-binding protein 5, C-terminal domain KS242_09775 PF00768 D-alanyl-D-alanine carboxypeptidase KS242_09780 PF02885 Glycosyl transferase family, helical bundle domain KS242_09780 PF00591 Glycosyl transferase family, a/b domain KS242_09780 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KS242_09785 PF01048 Phosphorylase superfamily KS242_09790 PF01676 Metalloenzyme superfamily KS242_09795 PF00589 Phage integrase family KS242_09795 PF02899 Phage integrase, N-terminal SAM-like domain KS242_09800 PF14004 Protein of unknown function (DUF4227) KS242_09805 PF01475 Ferric uptake regulator family KS242_09810 PF01944 Stage II sporulation protein M KS242_09815 PF00293 NUDIX domain KS242_09820 PF00248 Aldo/keto reductase family KS242_09830 PF00106 short chain dehydrogenase KS242_09835 PF01546 Peptidase family M20/M25/M40 KS242_09840 PF03009 Glycerophosphoryl diester phosphodiesterase family KS242_09845 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KS242_09850 PF00753 Metallo-beta-lactamase superfamily KS242_09865 PF00817 impB/mucB/samB family KS242_09865 PF11798 IMS family HHH motif KS242_09865 PF11799 impB/mucB/samB family C-terminal domain KS242_09870 PF07687 Peptidase dimerisation domain KS242_09870 PF01546 Peptidase family M20/M25/M40 KS242_09880 PF03734 L,D-transpeptidase catalytic domain KS242_09885 PF06081 Aromatic acid exporter family member 1 KS242_09885 PF11728 Putative aromatic acid exporter C-terminal domain KS242_09890 PF06491 Disulphide isomerase KS242_09895 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KS242_09895 PF00364 Biotin-requiring enzyme KS242_09895 PF02817 e3 binding domain KS242_09900 PF02780 Transketolase, C-terminal domain KS242_09900 PF02779 Transketolase, pyrimidine binding domain KS242_09905 PF00676 Dehydrogenase E1 component KS242_09910 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS242_09910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KS242_09915 PF00871 Acetokinase family KS242_09920 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KS242_09920 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KS242_09925 PF01515 Phosphate acetyl/butaryl transferase KS242_09930 PF02954 Bacterial regulatory protein, Fis family KS242_09930 PF00989 PAS fold KS242_09930 PF00158 Sigma-54 interaction domain KS242_09940 PF02811 PHP domain KS242_09940 PF00929 Exonuclease KS242_09940 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KS242_09940 PF07733 Bacterial DNA polymerase III alpha NTPase domain KS242_09940 PF14579 Helix-hairpin-helix motif KS242_09945 PF00696 Amino acid kinase family KS242_09945 PF13840 ACT domain KS242_09955 PF13407 Periplasmic binding protein domain KS242_09960 PF02653 Branched-chain amino acid transport system / permease component KS242_09965 PF02653 Branched-chain amino acid transport system / permease component KS242_09970 PF00005 ABC transporter KS242_09975 PF12833 Helix-turn-helix domain KS242_09975 PF01497 Periplasmic binding protein KS242_09980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_09980 PF06580 Histidine kinase KS242_09980 PF02743 Cache domain KS242_09980 PF00672 HAMP domain KS242_09990 PF08220 DeoR-like helix-turn-helix domain KS242_09990 PF00455 DeoR C terminal sensor domain KS242_09995 PF06134 L-rhamnose isomerase (RhaA) KS242_10000 PF05336 L-rhamnose mutarotase KS242_10005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KS242_10005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KS242_10010 PF00596 Class II Aldolase and Adducin N-terminal domain KS242_10015 PF07690 Major Facilitator Superfamily KS242_10030 PF00072 Response regulator receiver domain KS242_10030 PF08769 Sporulation initiation factor Spo0A C terminal KS242_10035 PF17820 PDZ domain KS242_10035 PF05580 SpoIVB peptidase S55 KS242_10040 PF13476 AAA domain KS242_10045 PF01316 Arginine repressor, DNA binding domain KS242_10045 PF02863 Arginine repressor, C-terminal domain KS242_10050 PF01728 FtsJ-like methyltransferase KS242_10050 PF01479 S4 domain KS242_10055 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KS242_10055 PF02779 Transketolase, pyrimidine binding domain KS242_10055 PF02780 Transketolase, C-terminal domain KS242_10060 PF00348 Polyprenyl synthetase KS242_10065 PF02609 Exonuclease VII small subunit KS242_10070 PF02601 Exonuclease VII, large subunit KS242_10070 PF13742 OB-fold nucleic acid binding domain KS242_10075 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KS242_10075 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KS242_10080 PF01029 NusB family KS242_10085 PF03780 Asp23 family, cell envelope-related function KS242_10090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KS242_10090 PF00289 Biotin carboxylase, N-terminal domain KS242_10090 PF02785 Biotin carboxylase C-terminal domain KS242_10095 PF00364 Biotin-requiring enzyme KS242_10100 PF00664 ABC transporter transmembrane region KS242_10100 PF00005 ABC transporter KS242_10105 PF00664 ABC transporter transmembrane region KS242_10105 PF00005 ABC transporter KS242_10110 PF12685 SpoIIIAH-like protein KS242_10120 PF09581 Stage III sporulation protein AF (Spore_III_AF) KS242_10125 PF09546 Stage III sporulation protein AE (spore_III_AE) KS242_10130 PF06686 Stage III sporulation protein AC/AD protein family KS242_10135 PF06686 Stage III sporulation protein AC/AD protein family KS242_10140 PF09548 Stage III sporulation protein AB (spore_III_AB) KS242_10150 PF01132 Elongation factor P (EF-P) OB domain KS242_10150 PF09285 Elongation factor P, C-terminal KS242_10150 PF08207 Elongation factor P (EF-P) KOW-like domain KS242_10155 PF00557 Metallopeptidase family M24 KS242_10155 PF01321 Creatinase/Prolidase N-terminal domain KS242_10160 PF01220 Dehydroquinase class II KS242_10165 PF11085 Conserved membrane protein YqhR KS242_10170 PF07136 Protein of unknown function (DUF1385) KS242_10180 PF01734 Patatin-like phospholipase KS242_10185 PF02742 Iron dependent repressor, metal binding and dimerisation domain KS242_10185 PF01325 Iron dependent repressor, N-terminal DNA binding domain KS242_10190 PF00581 Rhodanese-like domain KS242_10195 PF02347 Glycine cleavage system P-protein KS242_10200 PF02347 Glycine cleavage system P-protein KS242_10205 PF01571 Aminomethyltransferase folate-binding domain KS242_10205 PF08669 Glycine cleavage T-protein C-terminal barrel domain KS242_10210 PF00176 SNF2 family N-terminal domain KS242_10210 PF00271 Helicase conserved C-terminal domain KS242_10220 PF14038 YqzE-like protein KS242_10225 PF00437 Type II/IV secretion system protein KS242_10230 PF00482 Type II secretion system (T2SS), protein F KS242_10235 PF07963 Prokaryotic N-terminal methylation motif KS242_10265 PF00753 Metallo-beta-lactamase superfamily KS242_10270 PF00884 Sulfatase KS242_10275 PF00480 ROK family KS242_10285 PF05343 M42 glutamyl aminopeptidase KS242_10295 PF01694 Rhomboid family KS242_10305 PF01812 5-formyltetrahydrofolate cyclo-ligase family KS242_10310 PF00471 Ribosomal protein L33 KS242_10325 PF01895 PhoU domain KS242_10330 PF00005 ABC transporter KS242_10335 PF00005 ABC transporter KS242_10340 PF00528 Binding-protein-dependent transport system inner membrane component KS242_10345 PF00528 Binding-protein-dependent transport system inner membrane component KS242_10350 PF12849 PBP superfamily domain KS242_10355 PF03717 Penicillin-binding Protein dimerisation domain KS242_10355 PF00905 Penicillin binding protein transpeptidase domain KS242_10360 PF07690 Major Facilitator Superfamily KS242_10365 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KS242_10365 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KS242_10400 PF02690 Na+/Pi-cotransporter KS242_10415 PF04551 GcpE protein KS242_10430 PF01261 Xylose isomerase-like TIM barrel KS242_10435 PF00270 DEAD/DEAH box helicase KS242_10435 PF00271 Helicase conserved C-terminal domain KS242_10440 PF02401 LytB protein KS242_10445 PF01784 NIF3 (NGG1p interacting factor 3) KS242_10450 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KS242_10455 PF04539 Sigma-70 region 3 KS242_10455 PF04545 Sigma-70, region 4 KS242_10455 PF00140 Sigma-70 factor, region 1.2 KS242_10455 PF04542 Sigma-70 region 2 KS242_10455 PF03979 Sigma-70 factor, region 1.1 KS242_10460 PF10410 DnaB-helicase binding domain of primase KS242_10460 PF08275 DNA primase catalytic core, N-terminal domain KS242_10460 PF01807 CHC2 zinc finger KS242_10465 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KS242_10475 PF03618 Kinase/pyrophosphorylase KS242_10480 PF08279 HTH domain KS242_10480 PF00571 CBS domain KS242_10485 PF05746 DALR anticodon binding domain KS242_10485 PF02092 Glycyl-tRNA synthetase beta subunit KS242_10490 PF02091 Glycyl-tRNA synthetase alpha subunit KS242_10495 PF02565 Recombination protein O C terminal KS242_10495 PF11967 Recombination protein O N terminal KS242_10505 PF07650 KH domain KS242_10505 PF01926 50S ribosome-binding GTPase KS242_10515 PF02130 Uncharacterized protein family UPF0054 KS242_10520 PF07698 7TM receptor with intracellular HD hydrolase KS242_10520 PF07697 7TM-HD extracellular KS242_10520 PF01966 HD domain KS242_10525 PF02562 PhoH-like protein KS242_10530 PF06898 Putative stage IV sporulation protein YqfD KS242_10535 PF07873 YabP family KS242_10545 PF12127 SigmaW regulon antibacterial KS242_10550 PF01957 NfeD-like C-terminal, partner-binding KS242_10550 PF01972 Serine dehydrogenase proteinase KS242_10555 PF09424 Yqey-like protein KS242_10560 PF01165 Ribosomal protein S21 KS242_10565 PF01791 DeoC/LacD family aldolase KS242_10570 PF04055 Radical SAM superfamily KS242_10570 PF01938 TRAM domain KS242_10570 PF00919 Uncharacterized protein family UPF0004 KS242_10575 PF04452 RNA methyltransferase KS242_10585 PF00684 DnaJ central domain KS242_10585 PF00226 DnaJ domain KS242_10585 PF01556 DnaJ C terminal domain KS242_10590 PF00012 Hsp70 protein KS242_10595 PF01025 GrpE KS242_10600 PF01628 HrcA protein C terminal domain KS242_10605 PF06969 HemN C-terminal domain KS242_10605 PF04055 Radical SAM superfamily KS242_10610 PF00679 Elongation factor G C-terminus KS242_10610 PF00009 Elongation factor Tu GTP binding domain KS242_10610 PF03144 Elongation factor Tu domain 2 KS242_10610 PF06421 GTP-binding protein LepA C-terminus KS242_10620 PF07454 Stage II sporulation protein P (SpoIIP) KS242_10625 PF03418 Germination protease KS242_10630 PF01649 Ribosomal protein S20 KS242_10635 PF06144 DNA polymerase III, delta subunit KS242_10640 PF03772 Competence protein KS242_10640 PF00753 Metallo-beta-lactamase superfamily KS242_10640 PF13567 Domain of unknown function (DUF4131) KS242_10645 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KS242_10650 PF10531 SLBB domain KS242_10655 PF14748 Pyrroline-5-carboxylate reductase dimerisation KS242_10655 PF03807 NADP oxidoreductase coenzyme F420-dependent KS242_10660 PF13649 Methyltransferase domain KS242_10670 PF01966 HD domain KS242_10675 PF01467 Cytidylyltransferase-like KS242_10680 PF01985 CRS1 / YhbY (CRM) domain KS242_10685 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KS242_10685 PF01488 Shikimate / quinate 5-dehydrogenase KS242_10685 PF08501 Shikimate dehydrogenase substrate binding domain KS242_10690 PF01926 50S ribosome-binding GTPase KS242_10705 PF13244 Domain of unknown function (DUF4040) KS242_10705 PF00361 Proton-conducting membrane transporter KS242_10705 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KS242_10710 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KS242_10715 PF00361 Proton-conducting membrane transporter KS242_10720 PF01899 Na+/H+ ion antiporter subunit KS242_10725 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KS242_10730 PF03334 Na+/H+ antiporter subunit KS242_10735 PF04542 Sigma-70 region 2 KS242_10735 PF04545 Sigma-70, region 4 KS242_10745 PF01048 Phosphorylase superfamily KS242_10760 PF01272 Transcription elongation factor, GreA/GreB, C-term KS242_10760 PF03449 Transcription elongation factor, N-terminal KS242_10765 PF00485 Phosphoribulokinase / Uridine kinase family KS242_10770 PF01596 O-methyltransferase KS242_10775 PF02618 YceG-like family KS242_10780 PF06949 Protein of unknown function (DUF1292) KS242_10785 PF03652 Holliday junction resolvase KS242_10790 PF06135 IreB regulatory phosphoprotein KS242_10800 PF01594 AI-2E family transporter KS242_10810 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KS242_10810 PF14490 Helix-hairpin-helix containing domain KS242_10810 PF13538 UvrD-like helicase C-terminal domain KS242_10825 PF00266 Aminotransferase class-V KS242_10830 PF02082 Transcriptional regulator KS242_10835 PF16193 AAA C-terminal domain KS242_10835 PF12002 MgsA AAA+ ATPase C terminal KS242_10835 PF05496 Holliday junction DNA helicase RuvB P-loop domain KS242_10850 PF00152 tRNA synthetases class II (D, K and N) KS242_10850 PF02938 GAD domain KS242_10850 PF01336 OB-fold nucleic acid binding domain KS242_10855 PF03129 Anticodon binding domain KS242_10855 PF13393 Histidyl-tRNA synthetase KS242_10865 PF02580 D-Tyr-tRNA(Tyr) deacylase KS242_10870 PF13291 ACT domain KS242_10870 PF04607 Region found in RelA / SpoT proteins KS242_10870 PF02824 TGS domain KS242_10875 PF00156 Phosphoribosyl transferase domain KS242_10880 PF02272 DHHA1 domain KS242_10880 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KS242_10880 PF17768 RecJ OB domain KS242_10880 PF01368 DHH family KS242_10885 PF06305 Lipopolysaccharide assembly protein A domain KS242_10890 PF07549 SecD/SecF GG Motif KS242_10890 PF02355 Protein export membrane protein KS242_10900 PF14667 Polysaccharide biosynthesis C-terminal domain KS242_10900 PF01943 Polysaccharide biosynthesis protein KS242_10905 PF04239 Protein of unknown function (DUF421) KS242_10910 PF12670 Protein of unknown function (DUF3792) KS242_10915 PF02699 Preprotein translocase subunit KS242_10920 PF01702 Queuine tRNA-ribosyltransferase KS242_10925 PF02547 Queuosine biosynthesis protein KS242_10935 PF17864 RuvB AAA lid domain KS242_10935 PF05491 RuvB C-terminal winged helix domain KS242_10935 PF05496 Holliday junction DNA helicase RuvB P-loop domain KS242_10940 PF01330 RuvA N terminal domain KS242_10940 PF07499 RuvA, C-terminal domain KS242_10945 PF08955 BofC C-terminal domain KS242_10945 PF08977 Bypass of Forespore C, N terminal KS242_10955 PF01476 LysM domain KS242_10960 PF01842 ACT domain KS242_10960 PF00800 Prephenate dehydratase KS242_10965 PF01842 ACT domain KS242_10970 PF09269 Domain of unknown function (DUF1967) KS242_10970 PF01018 GTP1/OBG KS242_10970 PF01926 50S ribosome-binding GTPase KS242_10975 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KS242_10975 PF14682 Sporulation initiation phospho-transferase B, C-terminal KS242_10980 PF01016 Ribosomal L27 protein KS242_10985 PF04327 Cysteine protease Prp KS242_10990 PF00829 Ribosomal prokaryotic L21 protein KS242_10995 PF10150 Ribonuclease E/G family KS242_10995 PF00575 S1 RNA binding domain KS242_11000 PF02163 Peptidase family M50 KS242_11005 PF01551 Peptidase family M23 KS242_11015 PF03458 UPF0126 domain KS242_11020 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KS242_11025 PF03775 Septum formation inhibitor MinC, C-terminal domain KS242_11035 PF04085 rod shape-determining protein MreC KS242_11045 PF04002 RadC-like JAB domain KS242_11070 PF06750 Bacterial Peptidase A24 N-terminal domain KS242_11070 PF01478 Type IV leader peptidase family KS242_11075 PF07963 Prokaryotic N-terminal methylation motif KS242_11075 PF00114 Pilin (bacterial filament) KS242_11080 PF00482 Type II secretion system (T2SS), protein F KS242_11085 PF00437 Type II/IV secretion system protein KS242_11090 PF00437 Type II/IV secretion system protein KS242_11090 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KS242_11110 PF04264 YceI-like domain KS242_11115 PF00990 Diguanylate cyclase, GGDEF domain KS242_11120 PF02875 Mur ligase family, glutamate ligase domain KS242_11120 PF08245 Mur ligase middle domain KS242_11125 PF08443 RimK-like ATP-grasp domain KS242_11130 PF08443 RimK-like ATP-grasp domain KS242_11135 PF00005 ABC transporter KS242_11145 PF00324 Amino acid permease KS242_11160 PF13302 Acetyltransferase (GNAT) domain KS242_11165 PF08264 Anticodon-binding domain of tRNA KS242_11165 PF10458 Valyl tRNA synthetase tRNA binding arm KS242_11165 PF00133 tRNA synthetases class I (I, L, M and V) KS242_11180 PF01476 LysM domain KS242_11185 PF00202 Aminotransferase class-III KS242_11190 PF00490 Delta-aminolevulinic acid dehydratase KS242_11200 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KS242_11200 PF03900 Porphobilinogen deaminase, C-terminal domain KS242_11205 PF01578 Cytochrome C assembly protein KS242_11210 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KS242_11210 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KS242_11210 PF01488 Shikimate / quinate 5-dehydrogenase KS242_11220 PF01926 50S ribosome-binding GTPase KS242_11225 PF00004 ATPase family associated with various cellular activities (AAA) KS242_11225 PF05362 Lon protease (S16) C-terminal proteolytic domain KS242_11225 PF02190 ATP-dependent protease La (LON) substrate-binding domain KS242_11230 PF07724 AAA domain (Cdc48 subfamily) KS242_11230 PF10431 C-terminal, D2-small domain, of ClpB protein KS242_11230 PF06689 ClpX C4-type zinc finger KS242_11235 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KS242_11235 PF05698 Bacterial trigger factor protein (TF) C-terminus KS242_11235 PF05697 Bacterial trigger factor protein (TF) KS242_11260 PF07486 Cell Wall Hydrolase KS242_11265 PF13472 GDSL-like Lipase/Acylhydrolase family KS242_11270 PF12833 Helix-turn-helix domain KS242_11270 PF00072 Response regulator receiver domain KS242_11275 PF02743 Cache domain KS242_11275 PF00672 HAMP domain KS242_11275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_11275 PF06580 Histidine kinase KS242_11285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KS242_11285 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KS242_11290 PF04854 Protein of unknown function, DUF624 KS242_11295 PF00528 Binding-protein-dependent transport system inner membrane component KS242_11300 PF00528 Binding-protein-dependent transport system inner membrane component KS242_11305 PF13416 Bacterial extracellular solute-binding protein KS242_11330 PF04238 Protein of unknown function (DUF420) KS242_11335 PF12850 Calcineurin-like phosphoesterase superfamily domain KS242_11340 PF01725 Ham1 family KS242_11345 PF10646 Sporulation and spore germination KS242_11350 PF01177 Asp/Glu/Hydantoin racemase KS242_11355 PF01047 MarR family KS242_11360 PF03471 Transporter associated domain KS242_11360 PF00999 Sodium/hydrogen exchanger family KS242_11360 PF02080 TrkA-C domain KS242_11380 PF02659 Putative manganese efflux pump KS242_11400 PF00196 Bacterial regulatory proteins, luxR family KS242_11415 PF00005 ABC transporter KS242_11430 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain KS242_11430 PF01740 STAS domain KS242_11440 PF00171 Aldehyde dehydrogenase family KS242_11445 PF05901 Excalibur calcium-binding domain KS242_11445 PF00565 Staphylococcal nuclease homologue KS242_11450 PF05163 DinB family KS242_11475 PF00753 Metallo-beta-lactamase superfamily KS242_11490 PF13085 2Fe-2S iron-sulfur cluster binding domain KS242_11490 PF13183 4Fe-4S dicluster domain KS242_11495 PF00890 FAD binding domain KS242_11495 PF02910 Fumarate reductase flavoprotein C-term KS242_11500 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KS242_11505 PF10702 Protein of unknown function (DUF2507) KS242_11515 PF08459 UvrC Helix-hairpin-helix N-terminal KS242_11515 PF01541 GIY-YIG catalytic domain KS242_11515 PF02151 UvrB/uvrC motif KS242_11520 PF00085 Thioredoxin KS242_11525 PF03994 Domain of Unknown Function (DUF350) KS242_11530 PF00488 MutS domain V KS242_11530 PF01713 Smr domain KS242_11535 PF14716 Helix-hairpin-helix domain KS242_11535 PF14791 DNA polymerase beta thumb KS242_11535 PF02811 PHP domain KS242_11540 PF02674 Colicin V production protein KS242_11545 PF05164 Cell division protein ZapA KS242_11550 PF11858 Domain of unknown function (DUF3378) KS242_11550 PF01351 Ribonuclease HII KS242_11575 PF03484 tRNA synthetase B5 domain KS242_11575 PF03147 Ferredoxin-fold anticodon binding domain KS242_11575 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KS242_11575 PF03483 B3/4 domain KS242_11575 PF01588 Putative tRNA binding domain KS242_11580 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KS242_11580 PF01409 tRNA synthetases class II core domain (F) KS242_11585 PF00588 SpoU rRNA Methylase family KS242_11585 PF08032 RNA 2'-O ribose methyltransferase substrate binding KS242_11590 PF14098 Small, acid-soluble spore protein I KS242_11595 PF01464 Transglycosylase SLT domain KS242_11600 PF05343 M42 glutamyl aminopeptidase KS242_11615 PF09335 SNARE associated Golgi protein KS242_11625 PF00453 Ribosomal protein L20 KS242_11630 PF01632 Ribosomal protein L35 KS242_11635 PF05198 Translation initiation factor IF-3, N-terminal domain KS242_11635 PF00707 Translation initiation factor IF-3, C-terminal domain KS242_11645 PF03129 Anticodon binding domain KS242_11645 PF02824 TGS domain KS242_11645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KS242_11645 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KS242_11650 PF08812 YtxC-like family KS242_11655 PF07319 Primosomal protein DnaI N-terminus KS242_11655 PF01695 IstB-like ATP binding protein KS242_11660 PF07261 Replication initiation and membrane attachment KS242_11665 PF03477 ATP cone domain KS242_11670 PF02801 Beta-ketoacyl synthase, C-terminal domain KS242_11670 PF00109 Beta-ketoacyl synthase, N-terminal domain KS242_11675 PF02675 S-adenosylmethionine decarboxylase KS242_11680 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KS242_11680 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KS242_11690 PF01121 Dephospho-CoA kinase KS242_11695 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KS242_11695 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KS242_11695 PF06827 Zinc finger found in FPG and IleRS KS242_11700 PF01367 5'-3' exonuclease, C-terminal SAM fold KS242_11700 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KS242_11700 PF00476 DNA polymerase family A KS242_11705 PF00512 His Kinase A (phospho-acceptor) domain KS242_11705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_11705 PF16736 Single Cache-like KS242_11705 PF00989 PAS fold KS242_11710 PF00072 Response regulator receiver domain KS242_11710 PF00486 Transcriptional regulatory protein, C terminal KS242_11715 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KS242_11715 PF00056 lactate/malate dehydrogenase, NAD binding domain KS242_11720 PF00180 Isocitrate/isopropylmalate dehydrogenase KS242_11725 PF00285 Citrate synthase, C-terminal domain KS242_11730 PF04284 Protein of unknown function (DUF441) KS242_11735 PF01594 AI-2E family transporter KS242_11740 PF04186 FxsA cytoplasmic membrane protein KS242_11745 PF00224 Pyruvate kinase, barrel domain KS242_11745 PF02887 Pyruvate kinase, alpha/beta domain KS242_11745 PF00391 PEP-utilising enzyme, mobile domain KS242_11750 PF00365 Phosphofructokinase KS242_11755 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KS242_11760 PF17848 Acetyl-coA carboxylase zinc finger domain KS242_11760 PF01039 Carboxyl transferase domain KS242_11765 PF00390 Malic enzyme, N-terminal domain KS242_11765 PF03949 Malic enzyme, NAD binding domain KS242_11770 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KS242_11770 PF14579 Helix-hairpin-helix motif KS242_11770 PF02811 PHP domain KS242_11770 PF01336 OB-fold nucleic acid binding domain KS242_11770 PF07733 Bacterial DNA polymerase III alpha NTPase domain KS242_11775 PF14034 Sporulation protein YtrH KS242_11785 PF01368 DHH family KS242_11785 PF02272 DHHA1 domain KS242_11790 PF03061 Thioesterase superfamily KS242_11790 PF00571 CBS domain KS242_11790 PF07085 DRTGG domain KS242_11790 PF00392 Bacterial regulatory proteins, gntR family KS242_11800 PF01321 Creatinase/Prolidase N-terminal domain KS242_11800 PF00557 Metallopeptidase family M24 KS242_11805 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KS242_11805 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KS242_11810 PF00871 Acetokinase family KS242_11815 PF02384 N-6 DNA Methylase KS242_11820 PF03390 2-hydroxycarboxylate transporter family KS242_11830 PF00072 Response regulator receiver domain KS242_11835 PF17203 Single cache domain 3 KS242_11835 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KS242_11835 PF00989 PAS fold KS242_11835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_11840 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KS242_11850 PF00269 Small, acid-soluble spore proteins, alpha/beta type KS242_11855 PF02568 Thiamine biosynthesis protein (ThiI) KS242_11855 PF02926 THUMP domain KS242_11860 PF00266 Aminotransferase class-V KS242_11865 PF06160 Septation ring formation regulator, EzrA KS242_11870 PF00440 Bacterial regulatory proteins, tetR family KS242_11875 PF13185 GAF domain KS242_11880 PF00990 Diguanylate cyclase, GGDEF domain KS242_11885 PF00163 Ribosomal protein S4/S9 N-terminal domain KS242_11885 PF01479 S4 domain KS242_11895 PF01740 STAS domain KS242_11900 PF05239 PRC-barrel domain KS242_11900 PF09557 Domain of unknown function (DUF2382) KS242_11910 PF00579 tRNA synthetases class I (W and Y) KS242_11910 PF01479 S4 domain KS242_11915 PF00912 Transglycosylase KS242_11915 PF00905 Penicillin binding protein transpeptidase domain KS242_11920 PF00356 Bacterial regulatory proteins, lacI family KS242_11925 PF01817 Chorismate mutase type II KS242_11925 PF00793 DAHP synthetase I family KS242_11930 PF02491 SHS2 domain inserted in FTSA KS242_11935 PF14145 YrhK-like protein KS242_11940 PF11009 Protein of unknown function (DUF2847) KS242_11945 PF12732 YtxH-like protein KS242_11955 PF01225 Mur ligase family, catalytic domain KS242_11955 PF02875 Mur ligase family, glutamate ligase domain KS242_11955 PF08245 Mur ligase middle domain KS242_11960 PF17854 FtsK alpha domain KS242_11960 PF09397 Ftsk gamma domain KS242_11960 PF01580 FtsK/SpoIIIE family KS242_11965 PF01588 Putative tRNA binding domain KS242_11965 PF14794 Domain of unknown function (DUF4479) KS242_11970 PF07285 Protein of unknown function (DUF1444) KS242_11975 PF00085 Thioredoxin KS242_11980 PF12729 Four helix bundle sensory module for signal transduction KS242_11980 PF00672 HAMP domain KS242_11980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS242_11995 PF01931 Protein of unknown function DUF84 KS242_12000 PF05343 M42 glutamyl aminopeptidase KS242_12010 PF02056 Family 4 glycosyl hydrolase KS242_12010 PF11975 Family 4 glycosyl hydrolase C-terminal domain KS242_12015 PF02390 Putative methyltransferase KS242_12025 PF01636 Phosphotransferase enzyme family KS242_12040 PF12832 MFS_1 like family KS242_12045 PF01546 Peptidase family M20/M25/M40 KS242_12050 PF08220 DeoR-like helix-turn-helix domain KS242_12055 PF01479 S4 domain KS242_12055 PF00849 RNA pseudouridylate synthase KS242_12060 PF01943 Polysaccharide biosynthesis protein KS242_12060 PF14667 Polysaccharide biosynthesis C-terminal domain KS242_12095 PF08264 Anticodon-binding domain of tRNA KS242_12095 PF00133 tRNA synthetases class I (I, L, M and V) KS242_12095 PF09334 tRNA synthetases class I (M) KS242_12095 PF13603 Leucyl-tRNA synthetase, Domain 2 KS242_12100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS242_12100 PF00672 HAMP domain KS242_12100 PF02743 Cache domain KS242_12105 PF02608 ABC transporter substrate-binding protein PnrA-like KS242_12110 PF06962 Putative rRNA methylase KS242_12115 PF10776 Protein of unknown function (DUF2600) KS242_12120 PF00132 Bacterial transferase hexapeptide (six repeats) KS242_12130 PF02773 S-adenosylmethionine synthetase, C-terminal domain KS242_12130 PF02772 S-adenosylmethionine synthetase, central domain KS242_12130 PF00438 S-adenosylmethionine synthetase, N-terminal domain KS242_12135 PF01293 Phosphoenolpyruvate carboxykinase KS242_12140 PF00293 NUDIX domain KS242_12165 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KS242_12165 PF13378 Enolase C-terminal domain-like KS242_12170 PF13193 AMP-binding enzyme C-terminal domain KS242_12170 PF00501 AMP-binding enzyme KS242_12175 PF00378 Enoyl-CoA hydratase/isomerase KS242_12180 PF00561 alpha/beta hydrolase fold KS242_12185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KS242_12185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KS242_12185 PF16582 Middle domain of thiamine pyrophosphate KS242_12190 PF00425 chorismate binding enzyme KS242_12195 PF01040 UbiA prenyltransferase family KS242_12200 PF03061 Thioesterase superfamily KS242_12205 PF01258 Prokaryotic dksA/traR C4-type zinc finger KS242_12210 PF12822 ECF transporter, substrate-specific component KS242_12215 PF05343 M42 glutamyl aminopeptidase KS242_12225 PF01636 Phosphotransferase enzyme family KS242_12230 PF07885 Ion channel KS242_12230 PF02254 TrkA-N domain KS242_12235 PF00342 Phosphoglucose isomerase KS242_12240 PF04070 Domain of unknown function (DUF378) KS242_12245 PF00575 S1 RNA binding domain KS242_12250 PF12697 Alpha/beta hydrolase family KS242_12255 PF00155 Aminotransferase class I and II KS242_12265 PF00381 PTS HPr component phosphorylation site KS242_12270 PF01048 Phosphorylase superfamily KS242_12275 PF02632 BioY family KS242_12280 PF02681 Divergent PAP2 family KS242_12290 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS242_12295 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS242_12300 PF00753 Metallo-beta-lactamase superfamily KS242_12310 PF01674 Lipase (class 2) KS242_12315 PF01521 Iron-sulphur cluster biosynthesis KS242_12320 PF01678 Diaminopimelate epimerase KS242_12325 PF07293 Protein of unknown function (DUF1450) KS242_12330 PF07315 Protein of unknown function (DUF1462) KS242_12335 PF01106 NifU-like domain KS242_12345 PF00288 GHMP kinases N terminal domain KS242_12345 PF08544 GHMP kinases C terminal KS242_12350 PF00291 Pyridoxal-phosphate dependent enzyme KS242_12355 PF03447 Homoserine dehydrogenase, NAD binding domain KS242_12355 PF01842 ACT domain KS242_12355 PF00742 Homoserine dehydrogenase KS242_12365 PF04608 Phosphatidylglycerophosphatase A KS242_12370 PF07875 Coat F domain KS242_12375 PF13344 Haloacid dehalogenase-like hydrolase KS242_12380 PF01934 Protein of unknown function DUF86 KS242_12385 PF06265 Protein of unknown function (DUF1027) KS242_12390 PF01551 Peptidase family M23 KS242_12395 PF09560 Sporulation protein YunB (Spo_YunB) KS242_12400 PF01966 HD domain KS242_12400 PF11871 Domain of unknown function (DUF3391) KS242_12405 PF08827 Domain of unknown function (DUF1805) KS242_12410 PF02872 5'-nucleotidase, C-terminal domain KS242_12415 PF01925 Sulfite exporter TauE/SafE KS242_12425 PF05675 Protein of unknown function (DUF817) KS242_12430 PF13443 Cro/C1-type HTH DNA-binding domain KS242_12435 PF11188 Protein of unknown function (DUF2975) KS242_12440 PF01458 Uncharacterized protein family (UPF0051) KS242_12445 PF01592 NifU-like N terminal domain KS242_12450 PF00266 Aminotransferase class-V KS242_12455 PF01458 Uncharacterized protein family (UPF0051) KS242_12460 PF00005 ABC transporter KS242_12465 PF03180 NLPA lipoprotein KS242_12470 PF00528 Binding-protein-dependent transport system inner membrane component KS242_12475 PF00005 ABC transporter KS242_12475 PF09383 NIL domain KS242_12485 PF00085 Thioredoxin KS242_12490 PF01751 Toprim domain KS242_12495 PF01597 Glycine cleavage H-protein KS242_12500 PF03960 ArsC family KS242_12510 PF07875 Coat F domain KS242_12515 PF01047 MarR family KS242_12525 PF00005 ABC transporter KS242_12530 PF00950 ABC 3 transport family KS242_12535 PF01475 Ferric uptake regulator family KS242_12540 PF01361 Tautomerase enzyme KS242_12545 PF18846 Bacterial archaeo-eukaryotic release factor family 5 KS242_12560 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KS242_12560 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KS242_12565 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KS242_12565 PF02770 Acyl-CoA dehydrogenase, middle domain KS242_12565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KS242_12570 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KS242_12575 PF00510 Cytochrome c oxidase subunit III KS242_12580 PF00115 Cytochrome C and Quinol oxidase polypeptide I KS242_12585 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KS242_12585 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KS242_12595 PF07690 Major Facilitator Superfamily KS242_12600 PF00474 Sodium:solute symporter family KS242_12605 PF00672 HAMP domain KS242_12605 PF12729 Four helix bundle sensory module for signal transduction KS242_12605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS242_12610 PF02898 Nitric oxide synthase, oxygenase domain KS242_12615 PF01497 Periplasmic binding protein KS242_12620 PF00005 ABC transporter KS242_12625 PF01032 FecCD transport family KS242_12630 PF01032 FecCD transport family KS242_12635 PF08892 YqcI/YcgG family KS242_12645 PF07875 Coat F domain KS242_12665 PF02673 Bacitracin resistance protein BacA KS242_12670 PF09335 SNARE associated Golgi protein KS242_12675 PF08712 Scaffold protein Nfu/NifU N terminal KS242_12675 PF13769 Virulence factor KS242_12680 PF06491 Disulphide isomerase KS242_12685 PF00199 Catalase KS242_12685 PF06628 Catalase-related immune-responsive KS242_12690 PF01699 Sodium/calcium exchanger protein KS242_12695 PF01565 FAD binding domain KS242_12695 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KS242_12705 PF00535 Glycosyl transferase family 2 KS242_12710 PF02350 UDP-N-acetylglucosamine 2-epimerase KS242_12720 PF00557 Metallopeptidase family M24 KS242_12730 PF01668 SmpB protein KS242_12740 PF17876 Cold shock domain KS242_12740 PF08206 Ribonuclease B OB domain KS242_12740 PF00773 RNB domain KS242_12740 PF00575 S1 RNA binding domain KS242_12745 PF12146 Serine aminopeptidase, S33 KS242_12750 PF03840 Preprotein translocase SecG subunit KS242_12755 PF00455 DeoR C terminal sensor domain KS242_12755 PF08220 DeoR-like helix-turn-helix domain KS242_12760 PF00294 pfkB family carbohydrate kinase KS242_12765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KS242_12765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KS242_12770 PF00381 PTS HPr component phosphorylation site KS242_12775 PF02896 PEP-utilising enzyme, TIM barrel domain KS242_12775 PF00391 PEP-utilising enzyme, mobile domain KS242_12775 PF05524 PEP-utilising enzyme, N-terminal KS242_12790 PF00106 short chain dehydrogenase KS242_12795 PF00113 Enolase, C-terminal TIM barrel domain KS242_12795 PF03952 Enolase, N-terminal domain KS242_12800 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KS242_12800 PF01676 Metalloenzyme superfamily KS242_12805 PF00121 Triosephosphate isomerase KS242_12810 PF00162 Phosphoglycerate kinase KS242_12815 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KS242_12815 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KS242_12820 PF04198 Putative sugar-binding domain KS242_12825 PF01554 MatE KS242_12835 PF05067 Manganese containing catalase KS242_12840 PF00501 AMP-binding enzyme KS242_12840 PF13193 AMP-binding enzyme C-terminal domain KS242_12845 PF00005 ABC transporter KS242_12850 PF00528 Binding-protein-dependent transport system inner membrane component KS242_12860 PF01053 Cys/Met metabolism PLP-dependent enzyme KS242_12865 PF00561 alpha/beta hydrolase fold KS242_12870 PF00909 Ammonium Transporter Family KS242_12875 PF00543 Nitrogen regulatory protein P-II KS242_12900 PF05067 Manganese containing catalase KS242_12905 PF02515 CoA-transferase family III KS242_12910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KS242_12910 PF00205 Thiamine pyrophosphate enzyme, central domain KS242_12910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KS242_12915 PF00171 Aldehyde dehydrogenase family KS242_12930 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KS242_12930 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KS242_12935 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KS242_12935 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KS242_12940 PF03480 Bacterial extracellular solute-binding protein, family 7 KS242_12945 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KS242_12945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KS242_12950 PF00392 Bacterial regulatory proteins, gntR family KS242_12950 PF07729 FCD domain KS242_12995 PF05067 Manganese containing catalase KS242_13000 PF00574 Clp protease KS242_13005 PF06271 RDD family KS242_13010 PF01343 Peptidase family S49 KS242_13015 PF00381 PTS HPr component phosphorylation site KS242_13020 PF14527 WhiA LAGLIDADG-like domain KS242_13020 PF02650 WhiA C-terminal HTH domain KS242_13020 PF10298 WhiA N-terminal LAGLIDADG-like domain KS242_13025 PF01933 Uncharacterised protein family UPF0052 KS242_13030 PF03668 P-loop ATPase protein family KS242_13035 PF00293 NUDIX domain KS242_13040 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS242_13050 PF01266 FAD dependent oxidoreductase KS242_13050 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KS242_13055 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KS242_13055 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KS242_13060 PF00230 Major intrinsic protein KS242_13065 PF04309 Glycerol-3-phosphate responsive antiterminator KS242_13070 PF14602 Hexapeptide repeat of succinyl-transferase KS242_13075 PF13419 Haloacid dehalogenase-like hydrolase KS242_13080 PF01790 Prolipoprotein diacylglyceryl transferase KS242_13085 PF07475 HPr Serine kinase C-terminal domain KS242_13085 PF02603 HPr Serine kinase N terminus KS242_13090 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KS242_13095 PF13349 Putative adhesin KS242_13100 PF02585 GlcNAc-PI de-N-acetylase KS242_13105 PF08830 Protein of unknown function (DUF1806) KS242_13115 PF00005 ABC transporter KS242_13115 PF17755 UvrA DNA-binding domain KS242_13115 PF17760 UvrA interaction domain KS242_13120 PF00271 Helicase conserved C-terminal domain KS242_13120 PF04851 Type III restriction enzyme, res subunit KS242_13120 PF02151 UvrB/uvrC motif KS242_13120 PF12344 Ultra-violet resistance protein B KS242_13120 PF17757 UvrB interaction domain KS242_13125 PF03144 Elongation factor Tu domain 2 KS242_13125 PF16658 Class II release factor RF3, C-terminal domain KS242_13125 PF00009 Elongation factor Tu GTP binding domain KS242_13130 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KS242_13135 PF00271 Helicase conserved C-terminal domain KS242_13135 PF00176 SNF2 family N-terminal domain KS242_13135 PF04434 SWIM zinc finger KS242_13140 PF17820 PDZ domain KS242_13145 PF17820 PDZ domain KS242_13145 PF03572 Peptidase family S41 KS242_13145 PF01471 Putative peptidoglycan binding domain KS242_13150 PF01551 Peptidase family M23 KS242_13150 PF04225 Opacity-associated protein A LysM-like domain KS242_13155 PF02687 FtsX-like permease family KS242_13155 PF18075 FtsX extracellular domain KS242_13160 PF00005 ABC transporter KS242_13165 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KS242_13175 PF02810 SEC-C motif KS242_13175 PF07517 SecA DEAD-like domain KS242_13175 PF01043 SecA preprotein cross-linking domain KS242_13175 PF07516 SecA Wing and Scaffold domain KS242_13180 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KS242_13180 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KS242_13190 PF02561 Flagellar protein FliS KS242_13195 PF07195 Flagellar hook-associated protein 2 C-terminus KS242_13195 PF02465 Flagellar hook-associated protein 2 N-terminus KS242_13200 PF03646 FlaG protein KS242_13205 PF00106 short chain dehydrogenase KS242_13210 PF01740 STAS domain KS242_13215 PF02348 Cytidylyltransferase KS242_13215 PF13472 GDSL-like Lipase/Acylhydrolase family KS242_13220 PF00483 Nucleotidyl transferase KS242_13225 PF17836 PglD N-terminal domain KS242_13225 PF00132 Bacterial transferase hexapeptide (six repeats) KS242_13230 PF08666 SAF domain KS242_13230 PF03102 NeuB family KS242_13235 PF02350 UDP-N-acetylglucosamine 2-epimerase KS242_13240 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KS242_13245 PF01370 NAD dependent epimerase/dehydratase family KS242_13260 PF00669 Bacterial flagellin N-terminal helical region KS242_13260 PF00700 Bacterial flagellin C-terminal helical region KS242_13265 PF02599 Global regulator protein family KS242_13270 PF02623 FliW protein KS242_13280 PF00700 Bacterial flagellin C-terminal helical region KS242_13280 PF00669 Bacterial flagellin N-terminal helical region KS242_13285 PF00460 Flagella basal body rod protein KS242_13285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KS242_13295 PF04316 Anti-sigma-28 factor, FlgM KS242_13310 PF04851 Type III restriction enzyme, res subunit KS242_13310 PF00271 Helicase conserved C-terminal domain KS242_13315 PF02645 Uncharacterised protein, DegV family COG1307 KS242_13320 PF00196 Bacterial regulatory proteins, luxR family KS242_13320 PF00072 Response regulator receiver domain KS242_13325 PF05384 Sensor protein DegS KS242_13325 PF07730 Histidine kinase KS242_13325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_13330 PF09186 Domain of unknown function (DUF1949) KS242_13330 PF01205 Uncharacterized protein family UPF0029 KS242_13335 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KS242_13340 PF01979 Amidohydrolase family KS242_13355 PF04203 Sortase domain KS242_13360 PF07729 FCD domain KS242_13360 PF00392 Bacterial regulatory proteins, gntR family KS242_13365 PF00375 Sodium:dicarboxylate symporter family KS242_13380 PF00367 phosphotransferase system, EIIB KS242_13380 PF02378 Phosphotransferase system, EIIC KS242_13385 PF01380 SIS domain KS242_13390 PF01418 Helix-turn-helix domain, rpiR family KS242_13390 PF01380 SIS domain KS242_13435 PF01261 Xylose isomerase-like TIM barrel KS242_13440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KS242_13440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KS242_13445 PF00528 Binding-protein-dependent transport system inner membrane component KS242_13450 PF00528 Binding-protein-dependent transport system inner membrane component KS242_13455 PF01547 Bacterial extracellular solute-binding protein KS242_13465 PF00403 Heavy-metal-associated domain KS242_13470 PF00403 Heavy-metal-associated domain KS242_13475 PF02583 Metal-sensitive transcriptional repressor KS242_13480 PF00072 Response regulator receiver domain KS242_13480 PF00486 Transcriptional regulatory protein, C terminal KS242_13485 PF00672 HAMP domain KS242_13485 PF00512 His Kinase A (phospho-acceptor) domain KS242_13490 PF00005 ABC transporter KS242_13505 PF00365 Phosphofructokinase KS242_13510 PF08240 Alcohol dehydrogenase GroES-like domain KS242_13510 PF00107 Zinc-binding dehydrogenase KS242_13520 PF02417 Chromate transporter KS242_13525 PF02417 Chromate transporter KS242_13540 PF13419 Haloacid dehalogenase-like hydrolase KS242_13545 PF00657 GDSL-like Lipase/Acylhydrolase KS242_13555 PF08386 TAP-like protein KS242_13555 PF00561 alpha/beta hydrolase fold KS242_13570 PF03176 MMPL family KS242_13575 PF01047 MarR family KS242_13580 PF14310 Fibronectin type III-like domain KS242_13580 PF00933 Glycosyl hydrolase family 3 N terminal domain KS242_13580 PF01915 Glycosyl hydrolase family 3 C-terminal domain KS242_13590 PF03551 Transcriptional regulator PadR-like family KS242_13590 PF10400 Virulence activator alpha C-term KS242_13600 PF05870 Phenolic acid decarboxylase (PAD) KS242_13615 PF08279 HTH domain KS242_13615 PF05043 Mga helix-turn-helix domain KS242_13615 PF00874 PRD domain KS242_13615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KS242_13620 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KS242_13625 PF02378 Phosphotransferase system, EIIC KS242_13630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KS242_13635 PF00440 Bacterial regulatory proteins, tetR family KS242_13640 PF00873 AcrB/AcrD/AcrF family KS242_13650 PF00474 Sodium:solute symporter family KS242_13660 PF02447 GntP family permease KS242_13665 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KS242_13665 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KS242_13670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KS242_13670 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KS242_13675 PF01418 Helix-turn-helix domain, rpiR family KS242_13675 PF01380 SIS domain KS242_13680 PF17853 GGDEF-like domain KS242_13680 PF13556 PucR C-terminal helix-turn-helix domain KS242_13685 PF00672 HAMP domain KS242_13685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS242_13685 PF02743 Cache domain KS242_13690 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KS242_13690 PF08501 Shikimate dehydrogenase substrate binding domain KS242_13695 PF02492 CobW/HypB/UreG, nucleotide-binding domain KS242_13695 PF07683 Cobalamin synthesis protein cobW C-terminal domain KS242_13700 PF00253 Ribosomal protein S14p/S29e KS242_13705 PF02492 CobW/HypB/UreG, nucleotide-binding domain KS242_13705 PF07683 Cobalamin synthesis protein cobW C-terminal domain KS242_13710 PF02492 CobW/HypB/UreG, nucleotide-binding domain KS242_13710 PF07683 Cobalamin synthesis protein cobW C-terminal domain KS242_13715 PF00171 Aldehyde dehydrogenase family KS242_13725 PF00331 Glycosyl hydrolase family 10 KS242_13730 PF00535 Glycosyl transferase family 2 KS242_13730 PF03552 Cellulose synthase KS242_13730 PF07238 PilZ domain KS242_13740 PF13089 Polyphosphate kinase N-terminal domain KS242_13740 PF17941 Polyphosphate kinase C-terminal domain 1 KS242_13740 PF02503 Polyphosphate kinase middle domain KS242_13740 PF13090 Polyphosphate kinase C-terminal domain 2 KS242_13745 PF02541 Ppx/GppA phosphatase family KS242_13755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KS242_13760 PF17874 MalT-like TPR region KS242_13760 PF00196 Bacterial regulatory proteins, luxR family KS242_13765 PF00232 Glycosyl hydrolase family 1 KS242_13770 PF00480 ROK family KS242_13775 PF12833 Helix-turn-helix domain KS242_13775 PF17853 GGDEF-like domain KS242_13780 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KS242_13780 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KS242_13780 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KS242_13790 PF01810 LysE type translocator KS242_13795 PF00324 Amino acid permease KS242_13800 PF02690 Na+/Pi-cotransporter KS242_13805 PF03816 Cell envelope-related transcriptional attenuator domain KS242_13810 PF03816 Cell envelope-related transcriptional attenuator domain KS242_13845 PF01501 Glycosyl transferase family 8 KS242_13845 PF00535 Glycosyl transferase family 2 KS242_13855 PF00535 Glycosyl transferase family 2 KS242_13870 PF04101 Glycosyltransferase family 28 C-terminal domain KS242_13870 PF03033 Glycosyltransferase family 28 N-terminal domain KS242_13875 PF02397 Bacterial sugar transferase KS242_13885 PF13614 AAA domain KS242_13890 PF02706 Chain length determinant protein KS242_13890 PF13807 G-rich domain on putative tyrosine kinase KS242_13900 PF00483 Nucleotidyl transferase KS242_13905 PF01476 LysM domain KS242_13905 PF00877 NlpC/P60 family KS242_13920 PF13581 Histidine kinase-like ATPase domain KS242_13935 PF01554 MatE KS242_13950 PF08450 SMP-30/Gluconolactonase/LRE-like region KS242_13955 PF13302 Acetyltransferase (GNAT) domain KS242_13960 PF07650 KH domain KS242_13960 PF01926 50S ribosome-binding GTPase KS242_13965 PF16363 GDP-mannose 4,6 dehydratase KS242_13975 PF00480 ROK family KS242_13985 PF10750 Protein of unknown function (DUF2536) KS242_13990 PF03600 Citrate transporter KS242_14015 PF00072 Response regulator receiver domain KS242_14015 PF04397 LytTr DNA-binding domain KS242_14020 PF06580 Histidine kinase KS242_14020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_14040 PF03816 Cell envelope-related transcriptional attenuator domain KS242_14045 PF01061 ABC-2 type transporter KS242_14050 PF00005 ABC transporter KS242_14055 PF03808 Glycosyl transferase WecB/TagA/CpsF family KS242_14060 PF13457 GW (Gly-Tryp) dipeptide domain KS242_14060 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KS242_14065 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KS242_14065 PF08239 Bacterial SH3 domain KS242_14065 PF05036 Sporulation related domain KS242_14070 PF00534 Glycosyl transferases group 1 KS242_14075 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KS242_14080 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KS242_14085 PF08240 Alcohol dehydrogenase GroES-like domain KS242_14085 PF16912 Glucose dehydrogenase C-terminus KS242_14090 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KS242_14095 PF01467 Cytidylyltransferase-like KS242_14100 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KS242_14105 PF00953 Glycosyl transferase family 4 KS242_14125 PF03023 Lipid II flippase MurJ KS242_14160 PF18277 AbrB C-terminal domain KS242_14160 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KS242_14165 PF01520 N-acetylmuramoyl-L-alanine amidase KS242_14165 PF04122 Putative cell wall binding repeat 2 KS242_14170 PF13439 Glycosyltransferase Family 4 KS242_14170 PF00534 Glycosyl transferases group 1 KS242_14200 PF07977 FabA-like domain KS242_14215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KS242_14215 PF00460 Flagella basal body rod protein KS242_14220 PF00460 Flagella basal body rod protein KS242_14220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KS242_14230 PF12116 Stage III sporulation protein D KS242_14240 PF01551 Peptidase family M23 KS242_14245 PF08486 Stage II sporulation protein KS242_14250 PF00877 NlpC/P60 family KS242_14255 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KS242_14255 PF13378 Enolase C-terminal domain-like KS242_14260 PF17676 LD-carboxypeptidase C-terminal domain KS242_14260 PF02016 LD-carboxypeptidase N-terminal domain KS242_14265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KS242_14270 PF00005 ABC transporter KS242_14270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KS242_14275 PF00528 Binding-protein-dependent transport system inner membrane component KS242_14275 PF12911 N-terminal TM domain of oligopeptide transport permease C KS242_14280 PF00528 Binding-protein-dependent transport system inner membrane component KS242_14285 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KS242_14295 PF06612 Protein of unknown function (DUF1146) KS242_14300 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KS242_14300 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KS242_14305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KS242_14305 PF02874 ATP synthase alpha/beta family, beta-barrel domain KS242_14310 PF00231 ATP synthase KS242_14315 PF02874 ATP synthase alpha/beta family, beta-barrel domain KS242_14315 PF00306 ATP synthase alpha/beta chain, C terminal domain KS242_14315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KS242_14320 PF00213 ATP synthase delta (OSCP) subunit KS242_14325 PF00430 ATP synthase B/B' CF(0) KS242_14330 PF00137 ATP synthase subunit C KS242_14335 PF00119 ATP synthase A chain KS242_14340 PF03899 ATP synthase I chain KS242_14345 PF02225 PA domain KS242_14345 PF00082 Subtilase family KS242_14345 PF13860 FlgD Ig-like domain KS242_14345 PF05922 Peptidase inhibitor I9 KS242_14350 PF02350 UDP-N-acetylglucosamine 2-epimerase KS242_14360 PF00464 Serine hydroxymethyltransferase KS242_14365 PF04260 Protein of unknown function (DUF436) KS242_14370 PF02502 Ribose/Galactose Isomerase KS242_14375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS242_14375 PF12729 Four helix bundle sensory module for signal transduction KS242_14375 PF00672 HAMP domain KS242_14380 PF01451 Low molecular weight phosphotyrosine protein phosphatase KS242_14385 PF01300 Telomere recombination KS242_14385 PF03481 Putative GTP-binding controlling metal-binding KS242_14395 PF09551 Stage II sporulation protein R (spore_II_R) KS242_14400 PF13847 Methyltransferase domain KS242_14400 PF17827 PrmC N-terminal domain KS242_14405 PF03462 PCRF domain KS242_14405 PF00472 RF-1 domain KS242_14410 PF00265 Thymidine kinase KS242_14415 PF01197 Ribosomal protein L31 KS242_14420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KS242_14420 PF07498 Rho termination factor, N-terminal domain KS242_14420 PF07497 Rho termination factor, RNA-binding domain KS242_14425 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KS242_14430 PF00923 Transaldolase/Fructose-6-phosphate aldolase KS242_14435 PF01116 Fructose-bisphosphate aldolase class-II KS242_14440 PF00072 Response regulator receiver domain KS242_14445 PF06418 CTP synthase N-terminus KS242_14445 PF00117 Glutamine amidotransferase class-I KS242_14450 PF05066 HB1, ASXL, restriction endonuclease HTH domain KS242_14455 PF03193 RsgA GTPase KS242_14460 PF13091 PLD-like domain KS242_14465 PF03485 Arginyl tRNA synthetase N terminal domain KS242_14465 PF05746 DALR anticodon binding domain KS242_14465 PF00750 tRNA synthetases class I (R) KS242_14475 PF17284 Spermidine synthase tetramerisation domain KS242_14480 PF00912 Transglycosylase KS242_14480 PF00905 Penicillin binding protein transpeptidase domain KS242_14485 PF08741 YwhD family KS242_14500 PF01966 HD domain KS242_14505 PF03099 Biotin/lipoate A/B protein ligase family KS242_14510 PF01740 STAS domain KS242_14510 PF13426 PAS domain KS242_14515 PF01515 Phosphate acetyl/butaryl transferase KS242_14520 PF06778 Chlorite dismutase KS242_14525 PF09671 Spore coat protein (Spore_GerQ) KS242_14530 PF04241 Protein of unknown function (DUF423) KS242_14550 PF03109 ABC1 family KS242_14560 PF01757 Acyltransferase family KS242_14565 PF02735 Ku70/Ku80 beta-barrel domain KS242_14570 PF01068 ATP dependent DNA ligase domain KS242_14575 PF02073 Thermophilic metalloprotease (M29) KS242_14580 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KS242_14580 PF01297 Zinc-uptake complex component A periplasmic KS242_14590 PF02566 OsmC-like protein KS242_14595 PF03741 Integral membrane protein TerC family KS242_14600 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KS242_14600 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KS242_14600 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KS242_14600 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KS242_14605 PF01594 AI-2E family transporter KS242_14610 PF07690 Major Facilitator Superfamily KS242_14615 PF00793 DAHP synthetase I family KS242_14615 PF01817 Chorismate mutase type II KS242_14630 PF03471 Transporter associated domain KS242_14630 PF01595 Cyclin M transmembrane N-terminal domain KS242_14630 PF00571 CBS domain KS242_14635 PF00270 DEAD/DEAH box helicase KS242_14635 PF00271 Helicase conserved C-terminal domain KS242_14635 PF00570 HRDC domain KS242_14635 PF16124 RecQ zinc-binding KS242_14635 PF09382 RQC domain KS242_14640 PF02073 Thermophilic metalloprotease (M29) KS242_14645 PF16326 ABC transporter C-terminal domain KS242_14645 PF12848 ABC transporter KS242_14645 PF00005 ABC transporter KS242_14650 PF08543 Phosphomethylpyrimidine kinase KS242_14655 PF07669 Eco57I restriction-modification methylase KS242_14670 PF03061 Thioesterase superfamily KS242_14675 PF13091 PLD-like domain KS242_14675 PF13396 Phospholipase_D-nuclease N-terminal KS242_14680 PF00892 EamA-like transporter family KS242_14690 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) KS242_14695 PF13472 GDSL-like Lipase/Acylhydrolase family KS242_14705 PF00072 Response regulator receiver domain KS242_14705 PF00196 Bacterial regulatory proteins, luxR family KS242_14710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_14710 PF07730 Histidine kinase KS242_14755 PF00440 Bacterial regulatory proteins, tetR family KS242_14760 PF00067 Cytochrome P450 KS242_14770 PF01131 DNA topoisomerase KS242_14770 PF01751 Toprim domain KS242_14775 PF00005 ABC transporter KS242_14775 PF12848 ABC transporter KS242_14780 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KS242_14780 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KS242_14785 PF01370 NAD dependent epimerase/dehydratase family KS242_14795 PF13276 HTH-like domain KS242_14795 PF00665 Integrase core domain KS242_14795 PF13333 Integrase core domain KS242_14810 PF13732 Domain of unknown function (DUF4162) KS242_14810 PF00005 ABC transporter KS242_14815 PF07690 Major Facilitator Superfamily KS242_14820 PF00290 Tryptophan synthase alpha chain KS242_14825 PF00291 Pyridoxal-phosphate dependent enzyme KS242_14830 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KS242_14835 PF00218 Indole-3-glycerol phosphate synthase KS242_14840 PF02885 Glycosyl transferase family, helical bundle domain KS242_14840 PF00591 Glycosyl transferase family, a/b domain KS242_14845 PF00117 Glutamine amidotransferase class-I KS242_14850 PF00425 chorismate binding enzyme KS242_14850 PF04715 Anthranilate synthase component I, N terminal region KS242_14855 PF00270 DEAD/DEAH box helicase KS242_14855 PF00271 Helicase conserved C-terminal domain KS242_14860 PF06725 3D domain KS242_14860 PF01476 LysM domain KS242_14865 PF00149 Calcineurin-like phosphoesterase KS242_14865 PF02872 5'-nucleotidase, C-terminal domain KS242_14875 PF00005 ABC transporter KS242_14880 PF00528 Binding-protein-dependent transport system inner membrane component KS242_14885 PF00528 Binding-protein-dependent transport system inner membrane component KS242_14890 PF00881 Nitroreductase family KS242_14895 PF00005 ABC transporter KS242_14900 PF01381 Helix-turn-helix KS242_14905 PF00710 Asparaginase, N-terminal KS242_14905 PF17763 Glutaminase/Asparaginase C-terminal domain KS242_14910 PF00206 Lyase KS242_14910 PF10415 Fumarase C C-terminus KS242_14915 PF03553 Na+/H+ antiporter family KS242_14920 PF02872 5'-nucleotidase, C-terminal domain KS242_14920 PF00746 LPXTG cell wall anchor motif KS242_14920 PF00149 Calcineurin-like phosphoesterase KS242_14920 PF00565 Staphylococcal nuclease homologue KS242_14925 PF01425 Amidase KS242_14930 PF13726 Na+-H+ antiporter family KS242_14930 PF03553 Na+/H+ antiporter family KS242_14935 PF13382 Adenine deaminase C-terminal domain KS242_14935 PF01979 Amidohydrolase family KS242_14940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KS242_14965 PF02073 Thermophilic metalloprotease (M29) KS242_14975 PF00296 Luciferase-like monooxygenase KS242_14980 PF00296 Luciferase-like monooxygenase KS242_14985 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KS242_14985 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KS242_14990 PF00939 Sodium:sulfate symporter transmembrane region KS242_14995 PF13538 UvrD-like helicase C-terminal domain KS242_15000 PF07690 Major Facilitator Superfamily KS242_15005 PF01042 Endoribonuclease L-PSP KS242_15015 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) KS242_15020 PF16884 N-terminal domain of oxidoreductase KS242_15020 PF00107 Zinc-binding dehydrogenase KS242_15035 PF14489 QueF-like protein KS242_15040 PF00294 pfkB family carbohydrate kinase KS242_15045 PF01842 ACT domain KS242_15045 PF00551 Formyl transferase KS242_15050 PF00202 Aminotransferase class-III KS242_15055 PF00696 Amino acid kinase family KS242_15060 PF01960 ArgJ family KS242_15065 PF01118 Semialdehyde dehydrogenase, NAD binding domain KS242_15065 PF02774 Semialdehyde dehydrogenase, dimerisation domain KS242_15070 PF00474 Sodium:solute symporter family KS242_15075 PF00392 Bacterial regulatory proteins, gntR family KS242_15075 PF07702 UTRA domain KS242_15085 PF01557 Fumarylacetoacetate (FAA) hydrolase family KS242_15090 PF01156 Inosine-uridine preferring nucleoside hydrolase KS242_15095 PF02811 PHP domain KS242_15105 PF13677 Membrane MotB of proton-channel complex MotA/MotB KS242_15105 PF00691 OmpA family KS242_15110 PF01618 MotA/TolQ/ExbB proton channel family KS242_15115 PF02378 Phosphotransferase system, EIIC KS242_15115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KS242_15120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KS242_15120 PF00874 PRD domain KS242_15120 PF05043 Mga helix-turn-helix domain KS242_15120 PF08279 HTH domain KS242_15120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KS242_15125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KS242_15130 PF01232 Mannitol dehydrogenase Rossmann domain KS242_15130 PF08125 Mannitol dehydrogenase C-terminal domain KS242_15135 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS242_15145 PF12867 DinB superfamily KS242_15150 PF00005 ABC transporter KS242_15150 PF17912 MalK OB fold domain KS242_15150 PF03459 TOBE domain KS242_15160 PF02535 ZIP Zinc transporter KS242_15165 PF09084 NMT1/THI5 like KS242_15170 PF00528 Binding-protein-dependent transport system inner membrane component KS242_15175 PF00005 ABC transporter KS242_15180 PF00005 ABC transporter KS242_15185 PF00528 Binding-protein-dependent transport system inner membrane component KS242_15190 PF00497 Bacterial extracellular solute-binding proteins, family 3 KS242_15195 PF07687 Peptidase dimerisation domain KS242_15195 PF01546 Peptidase family M20/M25/M40 KS242_15200 PF01521 Iron-sulphur cluster biosynthesis KS242_15205 PF01865 Protein of unknown function DUF47 KS242_15210 PF01384 Phosphate transporter family KS242_15215 PF00528 Binding-protein-dependent transport system inner membrane component KS242_15220 PF00005 ABC transporter KS242_15220 PF09383 NIL domain KS242_15225 PF03180 NLPA lipoprotein KS242_15230 PF13411 MerR HTH family regulatory protein KS242_15240 PF03009 Glycerophosphoryl diester phosphodiesterase family KS242_15250 PF17912 MalK OB fold domain KS242_15250 PF00005 ABC transporter KS242_15250 PF03459 TOBE domain KS242_15255 PF00528 Binding-protein-dependent transport system inner membrane component KS242_15260 PF00528 Binding-protein-dependent transport system inner membrane component KS242_15265 PF13416 Bacterial extracellular solute-binding protein KS242_15280 PF01758 Sodium Bile acid symporter family KS242_15290 PF00528 Binding-protein-dependent transport system inner membrane component KS242_15295 PF00571 CBS domain KS242_15295 PF00005 ABC transporter KS242_15300 PF00528 Binding-protein-dependent transport system inner membrane component KS242_15305 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KS242_15310 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KS242_15320 PF04371 Porphyromonas-type peptidyl-arginine deiminase KS242_15330 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KS242_15330 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KS242_15335 PF01037 Lrp/AsnC ligand binding domain KS242_15335 PF13404 AsnC-type helix-turn-helix domain KS242_15345 PF03994 Domain of Unknown Function (DUF350) KS242_15355 PF04012 PspA/IM30 family KS242_15365 PF03851 UV-endonuclease UvdE KS242_15370 PF00082 Subtilase family KS242_15375 PF00082 Subtilase family KS242_15380 PF01740 STAS domain KS242_15380 PF00916 Sulfate permease family KS242_15385 PF01022 Bacterial regulatory protein, arsR family KS242_15390 PF16916 Dimerisation domain of Zinc Transporter KS242_15390 PF01545 Cation efflux family KS242_15415 PF01266 FAD dependent oxidoreductase KS242_15420 PF01546 Peptidase family M20/M25/M40 KS242_15420 PF07687 Peptidase dimerisation domain KS242_15425 PF01047 MarR family KS242_15430 PF01738 Dienelactone hydrolase family KS242_15445 PF00171 Aldehyde dehydrogenase family KS242_15450 PF12146 Serine aminopeptidase, S33 KS242_15455 PF00440 Bacterial regulatory proteins, tetR family KS242_15460 PF03176 MMPL family KS242_15465 PF00248 Aldo/keto reductase family KS242_15475 PF00005 ABC transporter KS242_15480 PF00528 Binding-protein-dependent transport system inner membrane component KS242_15485 PF00497 Bacterial extracellular solute-binding proteins, family 3 KS242_15495 PF07690 Major Facilitator Superfamily KS242_15505 PF03591 AzlC protein KS242_15510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KS242_15510 PF08447 PAS fold KS242_15510 PF13426 PAS domain KS242_15530 PF00092 von Willebrand factor type A domain KS242_15540 PF02222 ATP-grasp domain KS242_15545 PF00990 Diguanylate cyclase, GGDEF domain KS242_15545 PF00563 EAL domain KS242_15545 PF03707 Bacterial signalling protein N terminal repeat KS242_15555 PF00535 Glycosyl transferase family 2 KS242_15560 PF00474 Sodium:solute symporter family KS242_15570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KS242_15575 PF07662 Na+ dependent nucleoside transporter C-terminus KS242_15575 PF01773 Na+ dependent nucleoside transporter N-terminus KS242_15595 PF01625 Peptide methionine sulfoxide reductase KS242_15595 PF01641 SelR domain KS242_15615 PF16363 GDP-mannose 4,6 dehydratase KS242_15625 PF16363 GDP-mannose 4,6 dehydratase KS242_15630 PF00534 Glycosyl transferases group 1 KS242_15630 PF13439 Glycosyltransferase Family 4 KS242_15640 PF02350 UDP-N-acetylglucosamine 2-epimerase KS242_15645 PF02719 Polysaccharide biosynthesis protein KS242_15655 PF00534 Glycosyl transferases group 1 KS242_15655 PF00862 Sucrose synthase KS242_15660 PF00535 Glycosyl transferase family 2 KS242_15665 PF13439 Glycosyltransferase Family 4 KS242_15665 PF00534 Glycosyl transferases group 1 KS242_15685 PF00005 ABC transporter KS242_15685 PF08402 TOBE domain KS242_15690 PF00528 Binding-protein-dependent transport system inner membrane component KS242_15695 PF00528 Binding-protein-dependent transport system inner membrane component KS242_15700 PF13416 Bacterial extracellular solute-binding protein KS242_15705 PF00232 Glycosyl hydrolase family 1 KS242_15710 PF00367 phosphotransferase system, EIIB KS242_15710 PF02378 Phosphotransferase system, EIIC KS242_15710 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KS242_15720 PF07859 alpha/beta hydrolase fold KS242_15740 PF02574 Homocysteine S-methyltransferase KS242_15745 PF00324 Amino acid permease KS242_15750 PF08533 Beta-galactosidase C-terminal domain KS242_15750 PF08532 Beta-galactosidase trimerisation domain KS242_15750 PF02449 Beta-galactosidase KS242_15755 PF08544 GHMP kinases C terminal KS242_15755 PF00288 GHMP kinases N terminal domain KS242_15755 PF10509 Galactokinase galactose-binding signature KS242_15760 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KS242_15760 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KS242_15765 PF01263 Aldose 1-epimerase KS242_15785 PF01047 MarR family KS242_15785 PF00480 ROK family KS242_15790 PF12464 Maltose acetyltransferase KS242_15790 PF14602 Hexapeptide repeat of succinyl-transferase KS242_15795 PF01520 N-acetylmuramoyl-L-alanine amidase KS242_15795 PF11741 AMIN domain KS242_15810 PF18801 response regulator aspartate phosphatase H, N terminal KS242_15810 PF17874 MalT-like TPR region KS242_15820 PF10787 Uncharacterised protein from bacillus cereus group KS242_15830 PF05525 Branched-chain amino acid transport protein KS242_15835 PF01810 LysE type translocator KS242_15845 PF16874 Glycosyl hydrolase family 36 C-terminal domain KS242_15845 PF16875 Glycosyl hydrolase family 36 N-terminal domain KS242_15850 PF02589 LUD domain KS242_15855 PF11870 Domain of unknown function (DUF3390) KS242_15855 PF13183 4Fe-4S dicluster domain KS242_15855 PF02589 LUD domain KS242_15860 PF02754 Cysteine-rich domain KS242_15865 PF07729 FCD domain KS242_15865 PF00392 Bacterial regulatory proteins, gntR family KS242_15870 PF02652 L-lactate permease KS242_15885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KS242_15885 PF03466 LysR substrate binding domain KS242_15890 PF02082 Transcriptional regulator KS242_15895 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS242_15900 PF07676 WD40-like Beta Propeller Repeat KS242_15900 PF00326 Prolyl oligopeptidase family KS242_15920 PF07687 Peptidase dimerisation domain KS242_15920 PF01546 Peptidase family M20/M25/M40 KS242_15925 PF03606 C4-dicarboxylate anaerobic carrier KS242_15930 PF04230 Polysaccharide pyruvyl transferase KS242_15940 PF04239 Protein of unknown function (DUF421) KS242_15945 PF03553 Na+/H+ antiporter family KS242_15950 PF01323 DSBA-like thioredoxin domain KS242_15955 PF07883 Cupin domain KS242_15960 PF07944 Beta-L-arabinofuranosidase, GH127 KS242_15970 PF00892 EamA-like transporter family KS242_15980 PF00704 Glycosyl hydrolases family 18 KS242_15990 PF00245 Alkaline phosphatase KS242_15995 PF00578 AhpC/TSA family KS242_16000 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS242_16000 PF13192 Thioredoxin domain KS242_16005 PF02626 Carboxyltransferase domain, subdomain A and B KS242_16010 PF03746 LamB/YcsF family KS242_16015 PF02682 Carboxyltransferase domain, subdomain C and D KS242_16020 PF01566 Natural resistance-associated macrophage protein KS242_16025 PF00274 Fructose-bisphosphate aldolase class-I KS242_16030 PF01027 Inhibitor of apoptosis-promoting Bax1 KS242_16060 PF04740 LXG domain of WXG superfamily KS242_16060 PF14449 Pre-toxin TG KS242_16075 PF01374 Glycosyl hydrolase family 46 KS242_16085 PF00005 ABC transporter KS242_16090 PF00512 His Kinase A (phospho-acceptor) domain KS242_16090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_16095 PF00486 Transcriptional regulatory protein, C terminal KS242_16095 PF00072 Response regulator receiver domain KS242_16100 PF07969 Amidohydrolase family KS242_16105 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KS242_16125 PF00488 MutS domain V KS242_16125 PF01624 MutS domain I KS242_16125 PF05188 MutS domain II KS242_16125 PF05192 MutS domain III KS242_16125 PF05190 MutS family domain IV KS242_16130 PF02595 Glycerate kinase family KS242_16135 PF02447 GntP family permease KS242_16140 PF05651 Putative sugar diacid recognition KS242_16140 PF17853 GGDEF-like domain KS242_16140 PF13556 PucR C-terminal helix-turn-helix domain KS242_16150 PF00324 Amino acid permease KS242_16160 PF10026 Predicted Zn-dependent protease (DUF2268) KS242_16165 PF08241 Methyltransferase domain KS242_16225 PF01758 Sodium Bile acid symporter family KS242_16245 PF18593 CdiI immunity protein KS242_16270 PF00580 UvrD/REP helicase N-terminal domain KS242_16270 PF13361 UvrD-like helicase C-terminal domain KS242_16280 PF00293 NUDIX domain KS242_16295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KS242_16300 PF00005 ABC transporter KS242_16300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KS242_16305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KS242_16305 PF00005 ABC transporter KS242_16310 PF00528 Binding-protein-dependent transport system inner membrane component KS242_16310 PF12911 N-terminal TM domain of oligopeptide transport permease C KS242_16315 PF00528 Binding-protein-dependent transport system inner membrane component KS242_16320 PF04951 D-aminopeptidase KS242_16325 PF05343 M42 glutamyl aminopeptidase KS242_16335 PF01979 Amidohydrolase family KS242_16340 PF00326 Prolyl oligopeptidase family KS242_16340 PF07676 WD40-like Beta Propeller Repeat KS242_16345 PF01470 Pyroglutamyl peptidase KS242_16370 PF03880 DbpA RNA binding domain KS242_16370 PF00271 Helicase conserved C-terminal domain KS242_16370 PF00270 DEAD/DEAH box helicase KS242_16375 PF08531 Alpha-L-rhamnosidase N-terminal domain KS242_16375 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain KS242_16375 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain KS242_16375 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain KS242_16380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KS242_16380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KS242_16385 PF03613 PTS system mannose/fructose/sorbose family IID component KS242_16390 PF03609 PTS system sorbose-specific iic component KS242_16395 PF03610 PTS system fructose IIA component KS242_16395 PF03830 PTS system sorbose subfamily IIB component KS242_16405 PF01740 STAS domain KS242_16405 PF00916 Sulfate permease family KS242_16410 PF09339 IclR helix-turn-helix domain KS242_16410 PF01614 Bacterial transcriptional regulator KS242_16420 PF03932 CutC family KS242_16425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_16425 PF00512 His Kinase A (phospho-acceptor) domain KS242_16425 PF00989 PAS fold KS242_16425 PF13426 PAS domain KS242_16425 PF13188 PAS domain KS242_16440 PF02590 Predicted SPOUT methyltransferase KS242_16455 PF02028 BCCT, betaine/carnitine/choline family transporter KS242_16460 PF13649 Methyltransferase domain KS242_16465 PF02517 CPBP intramembrane metalloprotease KS242_16475 PF00209 Sodium:neurotransmitter symporter family KS242_16490 PF03358 NADPH-dependent FMN reductase KS242_16495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KS242_16505 PF04304 Protein of unknown function (DUF454) KS242_16525 PF01575 MaoC like domain KS242_16550 PF00128 Alpha amylase, catalytic domain KS242_16560 PF02673 Bacitracin resistance protein BacA KS242_16575 PF00180 Isocitrate/isopropylmalate dehydrogenase KS242_16580 PF00072 Response regulator receiver domain KS242_16580 PF08769 Sporulation initiation factor Spo0A C terminal KS242_16585 PF07992 Pyridine nucleotide-disulphide oxidoreductase KS242_16590 PF01032 FecCD transport family KS242_16595 PF01032 FecCD transport family KS242_16600 PF00893 Small Multidrug Resistance protein KS242_16605 PF00893 Small Multidrug Resistance protein KS242_16615 PF00732 GMC oxidoreductase KS242_16615 PF05199 GMC oxidoreductase KS242_16620 PF00171 Aldehyde dehydrogenase family KS242_16630 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KS242_16635 PF03123 CAT RNA binding domain KS242_16635 PF00874 PRD domain KS242_16640 PF00268 Ribonucleotide reductase, small chain KS242_16645 PF00258 Flavodoxin KS242_16650 PF00293 NUDIX domain KS242_16655 PF05977 Transmembrane secretion effector KS242_16670 PF02702 Osmosensitive K+ channel His kinase sensor domain KS242_16675 PF02669 K+-transporting ATPase, c chain KS242_16685 PF03814 Potassium-transporting ATPase A subunit KS242_16710 PF09339 IclR helix-turn-helix domain KS242_16710 PF01614 Bacterial transcriptional regulator KS242_16715 PF00294 pfkB family carbohydrate kinase KS242_16720 PF03812 2-keto-3-deoxygluconate permease KS242_16730 PF04962 KduI/IolB family KS242_16735 PF07694 5TMR of 5TMR-LYT KS242_16735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_16735 PF06580 Histidine kinase KS242_16740 PF04397 LytTr DNA-binding domain KS242_16740 PF00072 Response regulator receiver domain KS242_16745 PF07690 Major Facilitator Superfamily KS242_16750 PF13302 Acetyltransferase (GNAT) domain KS242_16765 PF10502 Signal peptidase, peptidase S26 KS242_16780 PF12833 Helix-turn-helix domain KS242_16795 PF03641 Possible lysine decarboxylase KS242_16800 PF08713 DNA alkylation repair enzyme KS242_16805 PF01810 LysE type translocator KS242_16810 PF13302 Acetyltransferase (GNAT) domain KS242_16835 PF13229 Right handed beta helix region KS242_16840 PF04134 Protein of unknown function, DUF393 KS242_16845 PF03816 Cell envelope-related transcriptional attenuator domain KS242_16850 PF06912 Protein of unknown function (DUF1275) KS242_16855 PF06803 Protein of unknown function (DUF1232) KS242_16875 PF01032 FecCD transport family KS242_16880 PF01032 FecCD transport family KS242_16900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KS242_16900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KS242_16900 PF03129 Anticodon binding domain KS242_16900 PF02824 TGS domain KS242_16905 PF00005 ABC transporter KS242_16905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KS242_16910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KS242_16910 PF00005 ABC transporter KS242_16915 PF00528 Binding-protein-dependent transport system inner membrane component KS242_16920 PF00528 Binding-protein-dependent transport system inner membrane component KS242_16925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KS242_16930 PF02687 FtsX-like permease family KS242_16935 PF00005 ABC transporter KS242_16940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_16945 PF00072 Response regulator receiver domain KS242_16945 PF00486 Transcriptional regulatory protein, C terminal KS242_16965 PF00144 Beta-lactamase KS242_17010 PF00571 CBS domain KS242_17010 PF00005 ABC transporter KS242_17015 PF00528 Binding-protein-dependent transport system inner membrane component KS242_17020 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KS242_17025 PF00528 Binding-protein-dependent transport system inner membrane component KS242_17030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KS242_17070 PF00171 Aldehyde dehydrogenase family KS242_17075 PF01472 PUA domain KS242_17075 PF00696 Amino acid kinase family KS242_17080 PF03807 NADP oxidoreductase coenzyme F420-dependent KS242_17080 PF14748 Pyrroline-5-carboxylate reductase dimerisation KS242_17095 PF01098 Cell cycle protein KS242_17100 PF01554 MatE KS242_17105 PF11798 IMS family HHH motif KS242_17105 PF11799 impB/mucB/samB family C-terminal domain KS242_17105 PF00817 impB/mucB/samB family KS242_17115 PF11975 Family 4 glycosyl hydrolase C-terminal domain KS242_17115 PF02056 Family 4 glycosyl hydrolase KS242_17120 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KS242_17120 PF00356 Bacterial regulatory proteins, lacI family KS242_17130 PF00293 NUDIX domain KS242_17130 PF13344 Haloacid dehalogenase-like hydrolase KS242_17140 PF00293 NUDIX domain KS242_17140 PF09297 NADH pyrophosphatase zinc ribbon domain KS242_17140 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain KS242_17150 PF00801 PKD domain KS242_17150 PF05547 Immune inhibitor A peptidase M6 KS242_17155 PF00512 His Kinase A (phospho-acceptor) domain KS242_17155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_17155 PF18719 ArlS sensor domain KS242_17160 PF00072 Response regulator receiver domain KS242_17160 PF00486 Transcriptional regulatory protein, C terminal KS242_17165 PF12704 MacB-like periplasmic core domain KS242_17165 PF02687 FtsX-like permease family KS242_17170 PF00005 ABC transporter KS242_17175 PF00324 Amino acid permease KS242_17185 PF01425 Amidase KS242_17190 PF00324 Amino acid permease KS242_17200 PF05223 NTF2-like N-terminal transpeptidase domain KS242_17200 PF03717 Penicillin-binding Protein dimerisation domain KS242_17200 PF00905 Penicillin binding protein transpeptidase domain KS242_17205 PF01238 Phosphomannose isomerase type I KS242_17210 PF01740 STAS domain KS242_17210 PF13426 PAS domain KS242_17215 PF17932 Tetracyclin repressor-like, C-terminal domain KS242_17215 PF00440 Bacterial regulatory proteins, tetR family KS242_17225 PF13180 PDZ domain KS242_17230 PF00753 Metallo-beta-lactamase superfamily KS242_17235 PF09648 YycH protein KS242_17240 PF07435 YycH protein KS242_17245 PF13426 PAS domain KS242_17245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KS242_17245 PF00512 His Kinase A (phospho-acceptor) domain KS242_17245 PF00672 HAMP domain KS242_17250 PF00072 Response regulator receiver domain KS242_17250 PF00486 Transcriptional regulatory protein, C terminal KS242_17255 PF00709 Adenylosuccinate synthetase KS242_17260 PF00772 DnaB-like helicase N terminal domain KS242_17260 PF03796 DnaB-like helicase C terminal domain KS242_17265 PF01281 Ribosomal protein L9, N-terminal domain KS242_17265 PF03948 Ribosomal protein L9, C-terminal domain KS242_17270 PF01368 DHH family KS242_17270 PF02272 DHHA1 domain KS242_17275 PF09991 Predicted membrane protein (DUF2232) KS242_17280 PF02811 PHP domain KS242_17285 PF13520 Amino acid permease KS242_17290 PF01842 ACT domain KS242_17290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KS242_17290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KS242_17295 PF00266 Aminotransferase class-V KS242_17300 PF02146 Sir2 family KS242_17305 PF07690 Major Facilitator Superfamily KS242_17310 PF01084 Ribosomal protein S18 KS242_17315 PF00436 Single-strand binding protein family KS242_17320 PF01250 Ribosomal protein S6 KS242_17325 PF06071 Protein of unknown function (DUF933) KS242_17325 PF01926 50S ribosome-binding GTPase KS242_17330 PF06107 Bacterial protein of unknown function (DUF951) KS242_17335 PF00924 Mechanosensitive ion channel KS242_17345 PF06866 Protein of unknown function (DUF1256) KS242_17350 PF02195 ParB-like nuclease domain KS242_17350 PF17762 HTH domain found in ParB protein KS242_17355 PF13614 AAA domain KS242_17360 PF02195 ParB-like nuclease domain KS242_17360 PF17762 HTH domain found in ParB protein KS242_17365 PF02527 rRNA small subunit methyltransferase G KS242_17370 PF13932 GidA associated domain KS242_17370 PF01134 Glucose inhibited division protein A KS242_17375 PF10396 GTP-binding protein TrmE N-terminus KS242_17375 PF12631 MnmE helical domain KS242_17375 PF01926 50S ribosome-binding GTPase KS242_17380 PF01424 R3H domain KS242_17380 PF14804 Jag N-terminus KS242_17385 PF02096 60Kd inner membrane protein KS242_17390 PF00825 Ribonuclease P KS242_17395 PF00468 Ribosomal protein L34 KS242_17460 PF01740 STAS domain KS242_17465 PF09680 Family of unknown function KS242_17470 PF01545 Cation efflux family KS242_17470 PF16916 Dimerisation domain of Zinc Transporter KS242_17475 PF07883 Cupin domain KS242_17485 PF01522 Polysaccharide deacetylase KS242_17510 PF04239 Protein of unknown function (DUF421) KS242_17515 PF04239 Protein of unknown function (DUF421) KS242_17530 PF02719 Polysaccharide biosynthesis protein KS242_17535 PF02350 UDP-N-acetylglucosamine 2-epimerase KS242_17540 PF00535 Glycosyl transferase family 2 KS242_17585 PF00196 Bacterial regulatory proteins, luxR family KS242_17585 PF00072 Response regulator receiver domain KS242_17625 PF04225 Opacity-associated protein A LysM-like domain KS242_17625 PF01551 Peptidase family M23 KS242_17675 PF10137 Predicted nucleotide-binding protein containing TIR-like domain KS242_17695 PF04098 Rad52/22 family double-strand break repair protein KS242_17700 PF00712 DNA polymerase III beta subunit, N-terminal domain KS242_17700 PF02767 DNA polymerase III beta subunit, central domain KS242_17700 PF02768 DNA polymerase III beta subunit, C-terminal domain KS242_17795 PF00575 S1 RNA binding domain KS242_17805 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KS242_17805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KS242_17805 PF03129 Anticodon binding domain KS242_17805 PF02824 TGS domain KS242_17860 PF04203 Sortase domain KS242_17870 PF18496 Collagenase G catalytic helper subdomain KS242_17870 PF01752 Collagenase KS242_17870 PF08453 Peptidase family M9 N-terminal KS242_17875 PF01381 Helix-turn-helix KS242_17925 PF00436 Single-strand binding protein family KS242_17945 PF08299 Bacterial dnaA protein helix-turn-helix KS242_17945 PF00308 Bacterial dnaA protein KS242_17945 PF11638 DnaA N-terminal domain