locus-tag	class	description
Terro_0001	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
Terro_0004	COG1063	alcohol dehydrogenase
Terro_0006	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_0008	COG2271	Major facilitator Superfamily
Terro_0013	COG0632	four-way junction helicase activity
Terro_0017	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
Terro_0024	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
Terro_0025	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
Terro_0032	COG3852	Histidine kinase
Terro_0034	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
Terro_0035	COG0424	maF-like protein
Terro_0037	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
Terro_0040	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_0041	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_0043	COG0343	queuine tRNA-ribosyltransferase activity
Terro_0048	COG3706	GGDEF domain
Terro_0048	COG4251	negative regulation of phosphorylation
Terro_0048	COG5001	Diguanylate cyclase
Terro_0048	COG2203	Gaf domain
Terro_0049	COG0798	PFAM Bile acid sodium symporter
Terro_0051	COG2226	methyltransferase
Terro_0052	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Terro_0057	COG1862	Preprotein translocase
Terro_0058	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Terro_0059	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
Terro_0060	COG1228	amidohydrolase
Terro_0067	COG0820	rRNA (adenine-C2-)-methyltransferase activity
Terro_0072	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
Terro_0073	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
Terro_0074	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
Terro_0076	COG3537	Alpha-1,2-mannosidase
Terro_0080	COG0475	glutathione-regulated potassium exporter activity
Terro_0085	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
Terro_0091	COG0445	tRNA wobble uridine modification
Terro_0093	COG0662	Cupin 2, conserved barrel domain protein
Terro_0093	COG2207	Transcriptional regulator
Terro_0101	COG1556	Lactate utilization protein
Terro_0102	COG1139	Iron-sulfur cluster binding protein
Terro_0103	COG0247	lactate metabolic process
Terro_0104	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_0110	COG0659	secondary active sulfate transmembrane transporter activity
Terro_0112	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_0112	COG3347	Dehydrogenase
Terro_0114	COG1609	Transcriptional regulator
Terro_0121	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Terro_0122	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Terro_0123	COG3661	Belongs to the glycosyl hydrolase 67 family
Terro_0127	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
Terro_0147	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
Terro_0148	COG0443	Heat shock 70 kDa protein
Terro_0151	COG0508	dehydrogenase complex catalyzes the overall conversion of
Terro_0152	COG0321	lipoyl(octanoyl) transferase activity
Terro_0154	COG1598	PFAM Uncharacterised protein family UPF0150
Terro_0155	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Terro_0157	COG0113	porphobilinogen synthase activity
Terro_0163	COG0436	Aminotransferase
Terro_0166	COG1366	Belongs to the anti-sigma-factor antagonist family
Terro_0167	COG1366	Belongs to the anti-sigma-factor antagonist family
Terro_0168	COG2172	sigma factor antagonist activity
Terro_0169	COG2172	sigma factor antagonist activity
Terro_0170	COG2205	protein histidine kinase activity
Terro_0172	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
Terro_0173	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
Terro_0176	COG0799	negative regulation of ribosome biogenesis
Terro_0177	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
Terro_0178	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
Terro_0180	COG1309	transcriptional regulator
Terro_0181	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
Terro_0186	COG0243	molybdopterin cofactor binding
Terro_0196	COG1668	transmembrane transport
Terro_0197	COG4152	abc transporter atp-binding protein
Terro_0199	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
Terro_0200	COG0745	RESPONSE REGULATOR receiver
Terro_0202	COG0450	alkyl hydroperoxide reductase
Terro_0205	COG0670	Belongs to the BI1 family
Terro_0206	COG1643	Atp-dependent helicase
Terro_0208	COG0557	exoribonuclease II activity
Terro_0209	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Terro_0211	COG1215	transferase activity, transferring glycosyl groups
Terro_0212	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Terro_0213	COG1321	iron dependent repressor
Terro_0217	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Terro_0228	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
Terro_0229	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Terro_0231	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
Terro_0233	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Terro_0235	COG0512	Glutamine amidotransferase of anthranilate synthase
Terro_0238	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
Terro_0239	COG0596	Alpha beta hydrolase
Terro_0240	COG1254	Belongs to the acylphosphatase family
Terro_0241	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
Terro_0243	COG2706	6-phosphogluconolactonase activity
Terro_0249	COG1570	exodeoxyribonuclease VII activity
Terro_0250	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Terro_0252	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
Terro_0255	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
Terro_0256	COG0233	cytoplasmic translational termination
Terro_0262	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
Terro_0271	COG0673	inositol 2-dehydrogenase activity
Terro_0277	COG1297	OPT oligopeptide transporter protein
Terro_0280	COG1595	DNA-templated transcription, initiation
Terro_0282	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
Terro_0284	COG0437	4 iron, 4 sulfur cluster binding
Terro_0292	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
Terro_0293	COG1845	cytochrome c oxidase, subunit III
Terro_0296	COG0456	acetyltransferase
Terro_0296	COG0454	-acetyltransferase
Terro_0303	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
Terro_0308	COG0058	SHG alpha-glucan phosphorylase activity
Terro_0309	COG0352	thiamine-phosphate diphosphorylase activity
Terro_0310	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
Terro_0311	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
Terro_0313	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
Terro_0314	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
Terro_0328	COG3537	Alpha-1,2-mannosidase
Terro_0330	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
Terro_0331	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Terro_0332	COG1040	competence protein
Terro_0338	COG0539	negative regulation of cytoplasmic translation
Terro_0340	COG1914	H( )-stimulated, divalent metal cation uptake system
Terro_0343	COG3585	molybdate ion transport
Terro_0344	COG1793	dna ligase
Terro_0348	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
Terro_0349	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
Terro_0353	COG0681	Belongs to the peptidase S26 family
Terro_0354	COG0571	ribonuclease III activity
Terro_0361	COG0303	'Molybdopterin
Terro_0365	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
Terro_0366	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
Terro_0367	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
Terro_0369	COG1201	RNA secondary structure unwinding
Terro_0370	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
Terro_0377	COG1879	ABC-type sugar transport system periplasmic component
Terro_0378	COG1172	Belongs to the binding-protein-dependent transport system permease family
Terro_0379	COG1129	ABC transporter
Terro_0381	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Terro_0385	COG3250	beta-galactosidase activity
Terro_0393	COG4260	virion core protein, lumpy skin disease virus
Terro_0396	COG0745	RESPONSE REGULATOR receiver
Terro_0398	COG2226	methyltransferase
Terro_0399	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
Terro_0403	COG1595	DNA-templated transcription, initiation
Terro_0407	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_0416	COG2814	Major facilitator Superfamily
Terro_0418	COG0438	transferase activity, transferring glycosyl groups
Terro_0421	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Terro_0427	COG0429	hydrolase of the alpha beta-hydrolase fold
Terro_0441	COG2989	Protein conserved in bacteria
Terro_0459	COG0583	DNA-binding transcription factor activity
Terro_0460	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Terro_0462	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
Terro_0464	COG4206	TonB-dependent receptor
Terro_0465	COG0488	(ABC) transporter
Terro_0469	COG1611	Belongs to the LOG family
Terro_0475	COG0538	isocitrate dehydrogenase activity
Terro_0478	COG0535	radical SAM domain protein
Terro_0488	COG0730	response to heat
Terro_0491	COG1346	cytolysis
Terro_0492	COG0477	Major facilitator Superfamily
Terro_0493	COG0154	amidase activity
Terro_0499	COG2267	carboxylic ester hydrolase activity
Terro_0500	COG0187	DNA topoisomerase II activity
Terro_0502	COG0291	Belongs to the bacterial ribosomal protein bL35 family
Terro_0503	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
Terro_0505	COG0366	Alpha amylase catalytic
Terro_0512	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
Terro_0514	COG0328	RNA-DNA hybrid ribonuclease activity
Terro_0514	COG0406	alpha-ribazole phosphatase activity
Terro_0517	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Terro_0526	COG0720	synthase
Terro_0527	COG0602	queuosine metabolic process
Terro_0532	COG5434	Belongs to the glycosyl hydrolase 28 family
Terro_0535	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
Terro_0537	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
Terro_0538	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
Terro_0539	COG0193	aminoacyl-tRNA hydrolase activity
Terro_0540	COG0360	Binds together with S18 to 16S ribosomal RNA
Terro_0541	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
Terro_0542	COG0359	binds to the 23S rRNA
Terro_0546	COG1505	serine-type exopeptidase activity
Terro_0548	COG2823	Periplasmic or secreted lipoprotein
Terro_0548	COG1652	LysM domain
Terro_0552	COG0211	Belongs to the bacterial ribosomal protein bL27 family
Terro_0553	COG0261	This protein binds to 23S rRNA in the presence of protein L20
Terro_0558	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
Terro_0561	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
Terro_0562	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Terro_0564	COG1322	Protein conserved in bacteria
Terro_0567	COG2132	Multicopper oxidase
Terro_0572	COG0714	Associated with various cellular activities
Terro_0596	COG0386	Belongs to the glutathione peroxidase family
Terro_0598	COG1278	Cold shock
Terro_0599	COG3132	Protein of unknown function, DUF480
Terro_0600	COG0673	inositol 2-dehydrogenase activity
Terro_0601	COG3108	Peptidase M15
Terro_0604	COG4251	negative regulation of phosphorylation
Terro_0610	COG2378	regulation of single-species biofilm formation
Terro_0619	COG2137	regulation of response to DNA damage stimulus
Terro_0623	COG3706	GGDEF domain
Terro_0623	COG0745	RESPONSE REGULATOR receiver
Terro_0624	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
Terro_0632	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Terro_0633	COG0860	N-Acetylmuramoyl-L-alanine amidase
Terro_0638	COG0134	indole-3-glycerol-phosphate synthase activity
Terro_0639	COG0135	phosphoribosylanthranilate isomerase activity
Terro_0642	COG0133	tryptophan synthase activity
Terro_0643	COG0159	tryptophan synthase activity
Terro_0644	COG0077	Prephenate dehydratase
Terro_0644	COG1605	Chorismate mutase
Terro_0645	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
Terro_0647	COG0287	Prephenate dehydrogenase
Terro_0648	COG2814	Major facilitator Superfamily
Terro_0650	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Terro_0651	COG1131	(ABC) transporter
Terro_0653	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Terro_0654	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Terro_0656	COG0546	phosphoglycolate phosphatase activity
Terro_0656	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
Terro_0657	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
Terro_0659	COG3383	formate dehydrogenase (NAD+) activity
Terro_0662	COG0564	pseudouridine synthase activity
Terro_0665	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
Terro_0667	COG0215	cysteine-tRNA ligase activity
Terro_0668	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
Terro_0671	COG0697	spore germination
Terro_0672	COG2255	four-way junction helicase activity
Terro_0674	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Terro_0675	COG0154	amidase activity
Terro_0681	COG0438	transferase activity, transferring glycosyl groups
Terro_0682	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Terro_0692	COG0306	phosphate transporter
Terro_0697	COG0792	nuclease activity
Terro_0699	COG1752	Esterase of the alpha-beta hydrolase superfamily
Terro_0701	COG2353	YceI-like domain
Terro_0703	COG0251	oxidation-reduction process
Terro_0704	COG0667	Aldo Keto reductase
Terro_0705	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
Terro_0707	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
Terro_0708	COG1278	Cold shock
Terro_0715	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
Terro_0716	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_0720	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
Terro_0722	COG1201	RNA secondary structure unwinding
Terro_0724	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
Terro_0725	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Terro_0728	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Terro_0733	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
Terro_0734	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
Terro_0737	COG0037	tRNA processing
Terro_0738	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Terro_0743	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Terro_0744	COG0442	prolyl-tRNA aminoacylation
Terro_0745	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
Terro_0746	COG3481	metal-dependent phosphohydrolase, HD sub domain
Terro_0747	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Terro_0748	COG0793	Belongs to the peptidase S41A family
Terro_0751	COG3710	Transcriptional regulator
Terro_0757	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
Terro_0758	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
Terro_0759	COG4251	negative regulation of phosphorylation
Terro_0759	COG5001	Diguanylate cyclase
Terro_0759	COG2203	Gaf domain
Terro_0759	COG3706	GGDEF domain
Terro_0760	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
Terro_0761	COG0242	peptide deformylase activity
Terro_0762	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
Terro_0763	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
Terro_0763	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Terro_0767	COG1064	alcohol dehydrogenase
Terro_0768	COG2226	methyltransferase
Terro_0769	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
Terro_0770	COG3710	Transcriptional regulator
Terro_0772	COG0805	protein transport
Terro_0773	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
Terro_0775	COG0735	belongs to the Fur family
Terro_0779	COG0517	IMP dehydrogenase activity
Terro_0779	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
Terro_0780	COG2877	3-deoxy-8-phosphooctulonate synthase activity
Terro_0782	COG1923	regulation of RNA biosynthetic process
Terro_0783	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
Terro_0785	COG0702	epimerase
Terro_0786	COG1733	regulation of RNA biosynthetic process
Terro_0787	COG3300	MHYT domain
Terro_0787	COG5001	Diguanylate cyclase
Terro_0789	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
Terro_0792	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
Terro_0793	COG0045	succinate-CoA ligase (ADP-forming) activity
Terro_0794	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
Terro_0795	COG3781	membrane
Terro_0809	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_0810	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
Terro_0811	COG1872	DUF167
Terro_0812	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
Terro_0813	COG1295	ribonuclease BN
Terro_0814	COG1529	Aldehyde oxidase and xanthine dehydrogenase
Terro_0815	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Terro_0820	COG1231	oxidoreductase activity
Terro_0821	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
Terro_0830	COG1595	DNA-templated transcription, initiation
Terro_0834	COG0105	UTP biosynthetic process
Terro_0836	COG0531	amino acid
Terro_0846	COG1902	pentaerythritol trinitrate reductase activity
Terro_0853	COG0366	Alpha amylase catalytic
Terro_0854	COG0366	Alpha amylase catalytic
Terro_0855	COG3387	PFAM Glycoside hydrolase 15-related
Terro_0860	COG1012	belongs to the aldehyde dehydrogenase family
Terro_0865	COG2351	hydroxyisourate hydrolase activity
Terro_0867	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Terro_0868	COG0590	tRNA wobble adenosine to inosine editing
Terro_0869	COG0460	homoserine dehydrogenase
Terro_0876	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Terro_0878	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
Terro_0880	COG0742	ribosomal rna small subunit methyltransferase
Terro_0882	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
Terro_0887	COG3781	membrane
Terro_0891	COG1136	(ABC) transporter
Terro_0891	COG0577	efflux transmembrane transporter activity
Terro_0893	COG0736	holo-[acyl-carrier-protein] synthase activity
Terro_0897	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
Terro_0900	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
Terro_0908	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Terro_0916	COG0277	FAD linked oxidase domain protein
Terro_0922	COG0025	NhaP-type Na H and K H
Terro_0924	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
Terro_0925	COG0750	zinc metalloprotease
Terro_0926	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
Terro_0928	COG4589	Belongs to the CDS family
Terro_0930	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
Terro_0932	COG1335	isochorismatase
Terro_0934	COG0824	Thioesterase
Terro_0935	COG0776	regulation of translation
Terro_0936	COG0463	Glycosyl transferase, family 2
Terro_0937	COG0506	proline dehydrogenase activity
Terro_0939	COG0463	Glycosyl transferase, family 2
Terro_0941	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
Terro_0944	COG4221	oxidoreductase activity
Terro_0945	COG2885	chlorophyll binding
Terro_0946	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
Terro_0947	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
Terro_0948	COG1546	Belongs to the CinA family
Terro_0948	COG1058	Belongs to the CinA family
Terro_0950	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
Terro_0951	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
Terro_0955	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Terro_0956	COG4677	pectinesterase activity
Terro_0959	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
Terro_0962	COG0758	DNA mediated transformation
Terro_0964	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
Terro_0969	COG1858	cytochrome C peroxidase
Terro_0971	COG4993	Dehydrogenase
Terro_0974	COG1012	belongs to the aldehyde dehydrogenase family
Terro_0977	COG0028	Belongs to the TPP enzyme family
Terro_0983	COG0577	efflux transmembrane transporter activity
Terro_0985	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
Terro_0986	COG0237	dephospho-CoA kinase activity
Terro_0987	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Terro_0988	COG3852	Histidine kinase
Terro_0989	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
Terro_0990	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
Terro_0991	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
Terro_0997	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
Terro_0998	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
Terro_0999	COG0363	glucosamine-6-phosphate deaminase activity
Terro_1000	COG0837	glucose binding
Terro_1001	COG0745	RESPONSE REGULATOR receiver
Terro_1001	COG3706	GGDEF domain
Terro_1002	COG0308	aminopeptidase N
Terro_1006	COG0714	Associated with various cellular activities
Terro_1014	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
Terro_1015	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
Terro_1015	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
Terro_1018	COG1278	Cold shock
Terro_1021	COG0525	valine-tRNA ligase activity
Terro_1022	COG2382	esterase
Terro_1024	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
Terro_1027	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
Terro_1032	COG0573	inorganic phosphate transmembrane transporter activity
Terro_1033	COG0581	inorganic phosphate transmembrane transporter activity
Terro_1034	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
Terro_1035	COG0704	Plays a role in the regulation of phosphate uptake
Terro_1036	COG0268	Binds directly to 16S ribosomal RNA
Terro_1038	COG0768	penicillin binding
Terro_1039	COG0772	Belongs to the SEDS family
Terro_1040	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Terro_1041	COG1530	ribonuclease E activity
Terro_1041	COG1530	ribonuclease E activity
Terro_1043	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
Terro_1046	COG0463	Glycosyl transferase, family 2
Terro_1047	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
Terro_1048	COG0006	proline dipeptidase activity
Terro_1049	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
Terro_1054	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
Terro_1055	COG0629	single-stranded DNA binding
Terro_1056	COG0730	response to heat
Terro_1060	COG2322	membrane
Terro_1061	COG0109	protoheme IX farnesyltransferase activity
Terro_1063	COG1082	Xylose isomerase domain protein TIM barrel
Terro_1065	COG0673	inositol 2-dehydrogenase activity
Terro_1066	COG2211	Major facilitator Superfamily
Terro_1071	COG1064	alcohol dehydrogenase
Terro_1072	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
Terro_1073	COG1053	succinate dehydrogenase
Terro_1074	COG2009	succinate dehydrogenase
Terro_1075	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
Terro_1076	COG2755	lipolytic protein G-D-S-L family
Terro_1076	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
Terro_1077	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Terro_1089	COG2271	Major facilitator Superfamily
Terro_1091	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Terro_1092	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
Terro_1097	COG2084	Dehydrogenase
Terro_1099	COG4948	Mandelate Racemase Muconate Lactonizing
Terro_1100	COG2271	Major facilitator Superfamily
Terro_1103	COG2186	Transcriptional regulator
Terro_1105	COG0589	response to stress
Terro_1107	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
Terro_1108	COG0628	permease
Terro_1112	COG0529	Catalyzes the synthesis of activated sulfate
Terro_1116	COG4774	siderophore transport
Terro_1118	COG4191	Histidine kinase
Terro_1118	COG0784	Response regulator, receiver
Terro_1123	COG0038	chloride channel
Terro_1126	COG2132	Multicopper oxidase
Terro_1129	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
Terro_1133	COG1595	DNA-templated transcription, initiation
Terro_1146	COG0582	viral genome integration into host DNA
Terro_1151	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Terro_1154	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Terro_1165	COG1132	(ABC) transporter
Terro_1168	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_1170	COG2197	response regulator
Terro_1179	COG3537	Alpha-1,2-mannosidase
Terro_1190	COG2205	protein histidine kinase activity
Terro_1199	COG0438	transferase activity, transferring glycosyl groups
Terro_1202	COG1309	transcriptional regulator
Terro_1207	COG2223	nitrite transmembrane transporter activity
Terro_1210	COG2223	nitrite transmembrane transporter activity
Terro_1211	COG0243	molybdopterin cofactor binding
Terro_1212	COG0437	4 iron, 4 sulfur cluster binding
Terro_1213	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
Terro_1214	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Terro_1216	COG2183	response to ionizing radiation
Terro_1220	COG0673	inositol 2-dehydrogenase activity
Terro_1222	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_1224	COG3250	beta-galactosidase activity
Terro_1228	COG0366	Alpha amylase catalytic
Terro_1229	COG0432	Pfam Uncharacterised protein family UPF0047
Terro_1231	COG2197	response regulator
Terro_1232	COG2205	protein histidine kinase activity
Terro_1236	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Terro_1237	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Terro_1239	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Terro_1241	COG1045	serine acetyltransferase
Terro_1242	COG0438	transferase activity, transferring glycosyl groups
Terro_1245	COG0438	transferase activity, transferring glycosyl groups
Terro_1253	COG1596	polysaccharide export
Terro_1254	COG0297	glycogen (starch) synthase activity
Terro_1259	COG2076	Multidrug Resistance protein
Terro_1261	COG0673	inositol 2-dehydrogenase activity
Terro_1263	COG0463	Glycosyl transferase, family 2
Terro_1264	COG0110	maltose O-acetyltransferase activity
Terro_1266	COG1088	dTDP-glucose 4,6-dehydratase activity
Terro_1267	COG2204	response regulator
Terro_1273	COG1472	Belongs to the glycosyl hydrolase 3 family
Terro_1276	COG1363	Peptidase, m42
Terro_1279	COG0154	amidase activity
Terro_1280	COG0673	inositol 2-dehydrogenase activity
Terro_1289	COG0745	RESPONSE REGULATOR receiver
Terro_1290	COG5002	protein histidine kinase activity
Terro_1291	COG0247	lactate metabolic process
Terro_1291	COG0277	FAD linked oxidase domain protein
Terro_1293	COG1538	Outer membrane efflux protein
Terro_1294	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Terro_1296	COG0583	DNA-binding transcription factor activity
Terro_1298	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
Terro_1301	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
Terro_1306	COG2897	thiosulfate sulfurtransferase activity
Terro_1307	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
Terro_1308	COG0739	heme binding
Terro_1309	COG1253	flavin adenine dinucleotide binding
Terro_1310	COG0601	transmembrane transport
Terro_1314	COG4974	Belongs to the 'phage' integrase family
Terro_1316	COG0653	protein targeting
Terro_1318	COG3852	Histidine kinase
Terro_1319	COG2204	response regulator
Terro_1321	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
Terro_1325	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
Terro_1331	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Terro_1333	COG0339	signal peptide processing
Terro_1334	COG1410	methionine synthase
Terro_1334	COG0646	methionine synthase
Terro_1335	COG0646	methionine synthase
Terro_1335	COG1410	methionine synthase
Terro_1343	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
Terro_1344	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
Terro_1346	COG0740	serine-type endopeptidase activity
Terro_1347	COG0544	peptidyl-prolyl cis-trans isomerase activity
Terro_1349	COG1573	uracil-dna glycosylase
Terro_1355	COG0175	sulfate reduction
Terro_1356	COG2895	sulfate adenylyltransferase (ATP) activity
Terro_1357	COG0175	sulfate reduction
Terro_1360	COG0463	Glycosyl transferase, family 2
Terro_1363	COG0745	RESPONSE REGULATOR receiver
Terro_1364	COG5002	protein histidine kinase activity
Terro_1370	COG1132	(ABC) transporter
Terro_1374	COG1704	LemA family
Terro_1375	COG0142	geranyltranstransferase activity
Terro_1376	COG1666	GTP binding
Terro_1377	COG0084	hydrolase, TatD family'
Terro_1380	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
Terro_1381	COG1940	carbohydrate kinase activity
Terro_1383	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
Terro_1385	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
Terro_1387	COG1612	heme a metabolic process
Terro_1387	COG0109	protoheme IX farnesyltransferase activity
Terro_1388	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
Terro_1392	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
Terro_1395	COG0006	proline dipeptidase activity
Terro_1396	COG3852	Histidine kinase
Terro_1398	COG0681	Belongs to the peptidase S26 family
Terro_1399	COG0149	triose-phosphate isomerase activity
Terro_1400	COG0126	phosphoglycerate kinase activity
Terro_1401	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Terro_1407	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Terro_1411	COG1174	glycine betaine transport
Terro_1412	COG1732	Glycine betaine
Terro_1415	COG4968	Prepilin-type N-terminal cleavage methylation domain
Terro_1417	COG0662	Cupin 2, conserved barrel domain protein
Terro_1422	COG0612	Peptidase, M16
Terro_1424	COG0391	Required for morphogenesis under gluconeogenic growth conditions
Terro_1429	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
Terro_1429	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
Terro_1433	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
Terro_1434	COG0457	Tetratricopeptide repeat
Terro_1438	COG0018	arginyl-trna synthetase
Terro_1439	COG0784	Response regulator, receiver
Terro_1439	COG2205	protein histidine kinase activity
Terro_1440	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
Terro_1441	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
Terro_1446	COG0218	Necessary for normal cell division and for the maintenance of normal septation
Terro_1455	COG1596	polysaccharide export
Terro_1457	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
Terro_1463	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
Terro_1465	COG0673	inositol 2-dehydrogenase activity
Terro_1466	COG1538	Outer membrane efflux protein
Terro_1469	COG1024	Enoyl-CoA hydratase
Terro_1469	COG1250	3-hydroxyacyl-CoA dehydrogenase
Terro_1475	COG1595	DNA-templated transcription, initiation
Terro_1480	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Terro_1480	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Terro_1481	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
Terro_1484	COG4191	Histidine kinase
Terro_1486	COG0626	cystathionine gamma-synthase activity
Terro_1487	COG0626	cystathionine gamma-synthase activity
Terro_1488	COG0542	response to heat
Terro_1489	COG1136	(ABC) transporter
Terro_1492	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
Terro_1496	COG0347	Belongs to the P(II) protein family
Terro_1497	COG0004	ammonium transporteR
Terro_1499	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Terro_1502	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
Terro_1503	COG2818	Glycosylase
Terro_1504	COG0531	amino acid
Terro_1506	COG2321	neutral zinc metallopeptidase
Terro_1508	COG0322	excinuclease ABC activity
Terro_1509	COG2885	chlorophyll binding
Terro_1510	COG5001	Diguanylate cyclase
Terro_1510	COG2203	Gaf domain
Terro_1510	COG4251	negative regulation of phosphorylation
Terro_1510	COG3706	GGDEF domain
Terro_1512	COG3275	phosphorelay sensor kinase activity
Terro_1513	COG3394	polysaccharide catabolic process
Terro_1514	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Terro_1515	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
Terro_1515	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Terro_1517	COG2252	PERMEase
Terro_1519	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
Terro_1521	COG2107	Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
Terro_1527	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Terro_1530	COG0101	tRNA pseudouridine synthase activity
Terro_1533	COG1331	Highly conserved protein containing a thioredoxin domain
Terro_1536	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
Terro_1538	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
Terro_1539	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
Terro_1542	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
Terro_1543	COG1970	mechanosensitive ion channel activity
Terro_1545	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
Terro_1548	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
Terro_1551	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
Terro_1555	COG0778	Nitroreductase
Terro_1556	COG0596	Alpha beta hydrolase
Terro_1557	COG0163	prenyltransferase activity
Terro_1563	COG0356	it plays a direct role in the translocation of protons across the membrane
Terro_1564	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
Terro_1566	COG1007	ATP synthesis coupled electron transport
Terro_1569	COG0713	ATP synthesis coupled electron transport
Terro_1571	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
Terro_1578	COG0649	NAD binding
Terro_1579	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Terro_1580	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Terro_1584	COG1476	TRANSCRIPTIONal
Terro_1586	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
Terro_1588	COG2022	thiamine diphosphate biosynthetic process
Terro_1591	COG1414	Transcriptional regulator
Terro_1592	COG0166	Belongs to the GPI family
Terro_1597	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
Terro_1600	COG3956	TIGRFAM MazG family protein
Terro_1602	COG4948	Mandelate Racemase Muconate Lactonizing
Terro_1609	COG0815	Transfers the fatty acyl group on membrane lipoproteins
Terro_1612	COG1832	CoA-binding protein
Terro_1613	COG4232	protein-disulfide reductase activity
Terro_1614	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
Terro_1615	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Terro_1616	COG0009	L-threonylcarbamoyladenylate synthase
Terro_1620	COG1595	DNA-templated transcription, initiation
Terro_1621	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
Terro_1622	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
Terro_1629	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
Terro_1630	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
Terro_1631	COG0028	Belongs to the TPP enzyme family
Terro_1638	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Terro_1644	COG4464	protein tyrosine phosphatase activity
Terro_1645	COG0047	phosphoribosylformylglycinamidine synthase activity
Terro_1649	COG2353	YceI-like domain
Terro_1653	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
Terro_1654	COG1648	precorrin-2 dehydrogenase activity
Terro_1654	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
Terro_1655	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
Terro_1657	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Terro_1661	COG2197	response regulator
Terro_1662	COG4585	Histidine kinase
Terro_1665	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
Terro_1666	COG3852	Histidine kinase
Terro_1673	COG4191	Histidine kinase
Terro_1674	COG2204	response regulator
Terro_1676	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
Terro_1684	COG0587	DNA-directed DNA polymerase activity
Terro_1687	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Terro_1689	COG2226	methyltransferase
Terro_1692	COG1215	transferase activity, transferring glycosyl groups
Terro_1695	COG1640	4-alpha-glucanotransferase
Terro_1696	COG0783	Belongs to the Dps family
Terro_1702	COG2032	superoxide dismutase activity
Terro_1705	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
Terro_1707	COG0165	Argininosuccinate lyase
Terro_1708	COG0137	argininosuccinate synthase activity
Terro_1709	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
Terro_1710	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Terro_1711	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
Terro_1712	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
Terro_1713	COG1438	arginine binding
Terro_1714	COG0069	glutamate synthase activity
Terro_1714	COG0070	glutamate synthase
Terro_1714	COG0067	glutamate synthase
Terro_1720	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Terro_1722	COG0438	transferase activity, transferring glycosyl groups
Terro_1724	COG0438	transferase activity, transferring glycosyl groups
Terro_1726	COG0438	transferase activity, transferring glycosyl groups
Terro_1730	COG1442	glycosyl transferase family 8
Terro_1731	COG0297	glycogen (starch) synthase activity
Terro_1738	COG1408	metallophosphoesterase
Terro_1739	COG0006	proline dipeptidase activity
Terro_1740	COG0511	ligase activity, forming carbon-carbon bonds
Terro_1741	COG0439	Biotin carboxylase
Terro_1742	COG0352	thiamine-phosphate diphosphorylase activity
Terro_1744	COG0531	amino acid
Terro_1745	COG0531	amino acid
Terro_1747	COG1136	(ABC) transporter
Terro_1759	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
Terro_1760	COG1794	racemase activity, acting on amino acids and derivatives
Terro_1761	COG0564	pseudouridine synthase activity
Terro_1762	COG4251	negative regulation of phosphorylation
Terro_1763	COG0784	Response regulator, receiver
Terro_1764	COG4191	Histidine kinase
Terro_1769	COG2271	Major facilitator Superfamily
Terro_1772	COG1609	Transcriptional regulator
Terro_1773	COG2160	L-arabinose isomerase activity
Terro_1784	COG3507	Belongs to the glycosyl hydrolase 43 family
Terro_1785	COG2382	esterase
Terro_1787	COG2382	esterase
Terro_1795	COG0738	Major facilitator superfamily
Terro_1797	COG1196	nuclear chromosome segregation
Terro_1800	COG1692	metallophosphoesterase
Terro_1802	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
Terro_1809	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Terro_1811	COG2957	Belongs to the agmatine deiminase family
Terro_1813	COG0590	tRNA wobble adenosine to inosine editing
Terro_1816	COG2200	EAL domain
Terro_1817	COG0556	nucleotide-excision repair
Terro_1818	COG0477	Major facilitator Superfamily
Terro_1819	COG0546	phosphoglycolate phosphatase activity
Terro_1820	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
Terro_1821	COG0745	RESPONSE REGULATOR receiver
Terro_1824	COG1815	bacterial-type flagellum-dependent cell motility
Terro_1825	COG1558	bacterial-type flagellum-dependent cell motility
Terro_1826	COG1677	Flagellar hook-basal body complex protein FliE
Terro_1828	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
Terro_1830	COG1157	protein secretion by the type III secretion system
Terro_1834	COG1749	Flagellar hook protein flgE
Terro_1838	COG3190	flagellar
Terro_1838	COG1338	Plays a role in the flagellum-specific transport system
Terro_1840	COG1684	flagellar biosynthetic protein fliR
Terro_1841	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
Terro_1842	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
Terro_1843	COG1191	sigma factor activity
Terro_1845	COG1776	CheC inhibitor of MCP methylation
Terro_1845	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
Terro_1846	COG4786	Flagellar basal body rod
Terro_1847	COG4786	Flagellar basal body rod
Terro_1849	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
Terro_1850	COG1706	bacterial-type flagellum-dependent cell motility
Terro_1854	COG4786	Flagellar basal body rod
Terro_1854	COG1256	bacterial-type flagellum assembly
Terro_1858	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
Terro_1859	COG1185	polyribonucleotide nucleotidyltransferase activity
Terro_1865	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
Terro_1866	COG1063	alcohol dehydrogenase
Terro_1869	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
Terro_1876	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
Terro_1876	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
Terro_1884	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Terro_1886	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Terro_1888	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
Terro_1889	COG1956	GAF domain-containing protein
Terro_1890	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
Terro_1900	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
Terro_1901	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
Terro_1902	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
Terro_1906	COG0009	L-threonylcarbamoyladenylate synthase
Terro_1911	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
Terro_1914	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Terro_1918	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Terro_1919	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Terro_1920	COG5001	Diguanylate cyclase
Terro_1920	COG3300	MHYT domain
Terro_1923	COG0515	serine threonine protein kinase
Terro_1923	COG2815	serine threonine protein kinase
Terro_1941	COG0351	phosphomethylpyrimidine kinase
Terro_1942	COG0284	orotidine-5'-phosphate decarboxylase activity
Terro_1946	COG0825	malonyl-CoA metabolic process
Terro_1949	COG0587	DNA-directed DNA polymerase activity
Terro_1950	COG3046	protein related to deoxyribodipyrimidine photolyase
Terro_1952	COG0436	Aminotransferase
Terro_1955	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Terro_1955	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Terro_1957	COG2080	2 iron, 2 sulfur cluster binding
Terro_1958	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
Terro_1959	COG1529	Aldehyde oxidase and xanthine dehydrogenase
Terro_1960	COG0514	ATP-dependent DNA helicase (RecQ)
Terro_1961	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
Terro_1963	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
Terro_1968	COG4191	Histidine kinase
Terro_1969	COG2204	response regulator
Terro_1971	COG1063	alcohol dehydrogenase
Terro_1973	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Terro_1975	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Terro_1976	COG1657	PFAM Prenyltransferase squalene oxidase
Terro_1977	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
Terro_1978	COG0497	DNA recombination
Terro_1983	COG2885	chlorophyll binding
Terro_1987	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
Terro_1988	COG0505	Belongs to the CarA family
Terro_1994	COG0022	dehydrogenase e1 component
Terro_1995	COG1404	Belongs to the peptidase S8 family
Terro_2000	COG0668	transmembrane transport
Terro_2001	COG2208	phosphoserine phosphatase activity
Terro_2001	COG2770	Histidine kinase
Terro_2002	COG1295	ribonuclease BN
Terro_2003	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
Terro_2007	COG2706	6-phosphogluconolactonase activity
Terro_2013	COG0251	oxidation-reduction process
Terro_2014	COG1921	L-seryl-tRNASec selenium transferase activity
Terro_2018	COG4585	Histidine kinase
Terro_2019	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Terro_2020	COG2271	Major facilitator Superfamily
Terro_2023	COG3119	arylsulfatase activity
Terro_2025	COG3537	Alpha-1,2-mannosidase
Terro_2029	COG0577	efflux transmembrane transporter activity
Terro_2029	COG1136	(ABC) transporter
Terro_2030	COG0577	efflux transmembrane transporter activity
Terro_2030	COG1136	(ABC) transporter
Terro_2032	COG0577	efflux transmembrane transporter activity
Terro_2032	COG1136	(ABC) transporter
Terro_2040	COG1228	amidohydrolase
Terro_2049	COG0534	Mate efflux family protein
Terro_2051	COG1215	transferase activity, transferring glycosyl groups
Terro_2053	COG5002	protein histidine kinase activity
Terro_2054	COG0745	RESPONSE REGULATOR receiver
Terro_2055	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Terro_2056	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Terro_2058	COG1538	Outer membrane efflux protein
Terro_2060	COG0745	RESPONSE REGULATOR receiver
Terro_2062	COG1450	Type ii and iii secretion system protein
Terro_2067	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
Terro_2067	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Terro_2068	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Terro_2073	COG0227	Belongs to the bacterial ribosomal protein bL28 family
Terro_2074	COG0267	Belongs to the bacterial ribosomal protein bL33 family
Terro_2077	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Terro_2078	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
Terro_2082	COG2819	hydrolase of the alpha beta superfamily
Terro_2083	COG0228	four-way junction DNA binding
Terro_2084	COG1837	Belongs to the UPF0109 family
Terro_2085	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
Terro_2086	COG0336	Belongs to the RNA methyltransferase TrmD family
Terro_2087	COG0335	large ribosomal subunit rRNA binding
Terro_2090	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
Terro_2091	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
Terro_2092	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
Terro_2093	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
Terro_2095	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
Terro_2096	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
Terro_2104	COG0741	lytic transglycosylase activity
Terro_2105	COG1595	DNA-templated transcription, initiation
Terro_2110	COG0217	transcriptional regulatory protein
Terro_2111	COG2514	catechol 2,3-dioxygenase activity
Terro_2118	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
Terro_2119	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
Terro_2121	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
Terro_2124	COG0148	phosphopyruvate hydratase activity
Terro_2129	COG2815	serine threonine protein kinase
Terro_2129	COG0515	serine threonine protein kinase
Terro_2133	COG1138	Cytochrome C-type biogenesis protein
Terro_2164	COG1538	Outer membrane efflux protein
Terro_2166	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Terro_2174	COG2080	2 iron, 2 sulfur cluster binding
Terro_2175	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
Terro_2176	COG1529	Aldehyde oxidase and xanthine dehydrogenase
Terro_2186	COG0589	response to stress
Terro_2187	COG2205	protein histidine kinase activity
Terro_2188	COG0745	RESPONSE REGULATOR receiver
Terro_2189	COG2204	response regulator
Terro_2191	COG0778	Nitroreductase
Terro_2191	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
Terro_2198	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
Terro_2200	COG0589	response to stress
Terro_2203	COG1127	ABC transporter
Terro_2205	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
Terro_2206	COG2226	methyltransferase
Terro_2208	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
Terro_2210	COG0586	Pfam SNARE associated Golgi protein
Terro_2212	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Terro_2213	COG1587	Uroporphyrinogen-III synthase
Terro_2214	COG0181	hydroxymethylbilane synthase activity
Terro_2218	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
Terro_2221	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
Terro_2225	COG3119	arylsulfatase activity
Terro_2226	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Terro_2229	COG3119	arylsulfatase activity
Terro_2231	COG0534	Mate efflux family protein
Terro_2237	COG1363	Peptidase, m42
Terro_2239	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Terro_2241	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
Terro_2243	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Terro_2243	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
Terro_2245	COG0745	RESPONSE REGULATOR receiver
Terro_2246	COG5002	protein histidine kinase activity
Terro_2248	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Terro_2252	COG0527	aspartate kinase activity
Terro_2253	COG2205	protein histidine kinase activity
Terro_2258	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
Terro_2260	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
Terro_2261	COG0531	amino acid
Terro_2267	COG1136	(ABC) transporter
Terro_2267	COG0577	efflux transmembrane transporter activity
Terro_2269	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
Terro_2270	COG0302	gtp cyclohydrolase
Terro_2274	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Terro_2279	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
Terro_2280	COG0579	oxidoreductase
Terro_2284	COG0297	glycogen (starch) synthase activity
Terro_2285	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Terro_2287	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
Terro_2290	COG0745	RESPONSE REGULATOR receiver
Terro_2293	COG1132	(ABC) transporter
Terro_2294	COG1349	DNA-binding transcription factor activity
Terro_2295	COG0494	nUDIX hydrolase
Terro_2298	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
Terro_2308	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Terro_2309	COG1132	(ABC) transporter
Terro_2311	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Terro_2315	COG1132	(ABC) transporter
Terro_2316	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Terro_2317	COG1522	sequence-specific DNA binding
Terro_2318	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
Terro_2321	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Terro_2321	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
Terro_2323	COG2080	2 iron, 2 sulfur cluster binding
Terro_2324	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
Terro_2325	COG1529	Aldehyde oxidase and xanthine dehydrogenase
Terro_2326	COG0514	ATP-dependent DNA helicase (RecQ)
Terro_2327	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
Terro_2329	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
Terro_2334	COG4191	Histidine kinase
Terro_2335	COG2204	response regulator
Terro_2337	COG1063	alcohol dehydrogenase
Terro_2339	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Terro_2341	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Terro_2342	COG1657	PFAM Prenyltransferase squalene oxidase
Terro_2343	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
Terro_2344	COG0497	DNA recombination
Terro_2349	COG2885	chlorophyll binding
Terro_2353	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
Terro_2354	COG0505	Belongs to the CarA family
Terro_2360	COG0022	dehydrogenase e1 component
Terro_2361	COG1404	Belongs to the peptidase S8 family
Terro_2366	COG0668	transmembrane transport
Terro_2367	COG2770	Histidine kinase
Terro_2367	COG2208	phosphoserine phosphatase activity
Terro_2368	COG1295	ribonuclease BN
Terro_2369	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
Terro_2373	COG2706	6-phosphogluconolactonase activity
Terro_2379	COG0251	oxidation-reduction process
Terro_2380	COG1921	L-seryl-tRNASec selenium transferase activity
Terro_2384	COG4585	Histidine kinase
Terro_2385	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Terro_2386	COG2271	Major facilitator Superfamily
Terro_2389	COG3119	arylsulfatase activity
Terro_2391	COG3537	Alpha-1,2-mannosidase
Terro_2395	COG1136	(ABC) transporter
Terro_2395	COG0577	efflux transmembrane transporter activity
Terro_2396	COG0577	efflux transmembrane transporter activity
Terro_2396	COG1136	(ABC) transporter
Terro_2399	COG1136	(ABC) transporter
Terro_2399	COG0577	efflux transmembrane transporter activity
Terro_2407	COG1228	amidohydrolase
Terro_2416	COG0534	Mate efflux family protein
Terro_2418	COG1215	transferase activity, transferring glycosyl groups
Terro_2420	COG5002	protein histidine kinase activity
Terro_2421	COG0745	RESPONSE REGULATOR receiver
Terro_2422	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Terro_2423	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Terro_2427	COG0745	RESPONSE REGULATOR receiver
Terro_2429	COG1450	Type ii and iii secretion system protein
Terro_2434	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
Terro_2434	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Terro_2435	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Terro_2439	COG0227	Belongs to the bacterial ribosomal protein bL28 family
Terro_2440	COG0267	Belongs to the bacterial ribosomal protein bL33 family
Terro_2443	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Terro_2444	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
Terro_2448	COG2819	hydrolase of the alpha beta superfamily
Terro_2449	COG0228	four-way junction DNA binding
Terro_2450	COG1837	Belongs to the UPF0109 family
Terro_2451	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
Terro_2452	COG0336	Belongs to the RNA methyltransferase TrmD family
Terro_2453	COG0335	large ribosomal subunit rRNA binding
Terro_2455	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
Terro_2456	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
Terro_2457	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
Terro_2458	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
Terro_2461	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
Terro_2468	COG0741	lytic transglycosylase activity
Terro_2474	COG0217	transcriptional regulatory protein
Terro_2475	COG2514	catechol 2,3-dioxygenase activity
Terro_2482	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
Terro_2483	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
Terro_2485	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
Terro_2487	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
Terro_2488	COG0148	phosphopyruvate hydratase activity
Terro_2493	COG2815	serine threonine protein kinase
Terro_2493	COG0515	serine threonine protein kinase
Terro_2528	COG1538	Outer membrane efflux protein
Terro_2530	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Terro_2536	COG3706	GGDEF domain
Terro_2536	COG0745	RESPONSE REGULATOR receiver
Terro_2538	COG2080	2 iron, 2 sulfur cluster binding
Terro_2539	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
Terro_2550	COG0589	response to stress
Terro_2551	COG2205	protein histidine kinase activity
Terro_2552	COG0745	RESPONSE REGULATOR receiver
Terro_2553	COG2204	response regulator
Terro_2555	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
Terro_2555	COG0778	Nitroreductase
Terro_2562	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
Terro_2564	COG0589	response to stress
Terro_2569	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
Terro_2570	COG2226	methyltransferase
Terro_2572	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
Terro_2574	COG0586	Pfam SNARE associated Golgi protein
Terro_2576	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Terro_2577	COG1587	Uroporphyrinogen-III synthase
Terro_2578	COG0181	hydroxymethylbilane synthase activity
Terro_2582	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
Terro_2585	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
Terro_2589	COG3119	arylsulfatase activity
Terro_2590	COG1262	PFAM Formylglycine-generating sulfatase enzyme
Terro_2593	COG3119	arylsulfatase activity
Terro_2595	COG0534	Mate efflux family protein
Terro_2601	COG1363	Peptidase, m42
Terro_2603	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Terro_2605	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
Terro_2607	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
Terro_2607	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Terro_2609	COG0745	RESPONSE REGULATOR receiver
Terro_2610	COG5002	protein histidine kinase activity
Terro_2612	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Terro_2616	COG0527	aspartate kinase activity
Terro_2617	COG2205	protein histidine kinase activity
Terro_2622	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
Terro_2624	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
Terro_2625	COG0531	amino acid
Terro_2631	COG1136	(ABC) transporter
Terro_2631	COG0577	efflux transmembrane transporter activity
Terro_2633	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
Terro_2634	COG0302	gtp cyclohydrolase
Terro_2638	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Terro_2643	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
Terro_2644	COG0579	oxidoreductase
Terro_2648	COG0297	glycogen (starch) synthase activity
Terro_2649	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Terro_2651	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
Terro_2654	COG0745	RESPONSE REGULATOR receiver
Terro_2657	COG1132	(ABC) transporter
Terro_2658	COG1349	DNA-binding transcription factor activity
Terro_2659	COG0494	nUDIX hydrolase
Terro_2662	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
Terro_2663	COG0459	protein refolding
Terro_2672	COG0635	Involved in the biosynthesis of porphyrin-containing compound
Terro_2673	COG1132	(ABC) transporter
Terro_2675	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Terro_2679	COG1132	(ABC) transporter
Terro_2681	COG1522	sequence-specific DNA binding
Terro_2682	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
Terro_2684	COG0606	chelatase, subunit chli
Terro_2687	COG1760	l-serine dehydratase
Terro_2688	COG1385	rRNA (uridine-N3-)-methyltransferase activity
Terro_2690	COG0484	heat shock protein binding
Terro_2691	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
Terro_2692	COG1420	regulation of RNA biosynthetic process
Terro_2693	COG0489	protein tyrosine kinase activity
Terro_2694	COG1607	acyl-coa hydrolase
Terro_2700	COG0753	catalase activity
Terro_2702	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_2704	COG0745	RESPONSE REGULATOR receiver
Terro_2712	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_2713	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_2719	COG2204	response regulator
Terro_2720	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
Terro_2723	COG0519	Catalyzes the synthesis of GMP from XMP
Terro_2723	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Terro_2726	COG0495	leucyl-tRNA aminoacylation
Terro_2736	COG2860	membrane
Terro_2740	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
Terro_2740	COG0646	methionine synthase
Terro_2743	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Terro_2744	COG1560	Kdo2-lipid A biosynthetic process
Terro_2749	COG0717	Belongs to the dCTP deaminase family
Terro_2750	COG0776	regulation of translation
Terro_2751	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
Terro_2752	COG0456	acetyltransferase
Terro_2753	COG0583	DNA-binding transcription factor activity
Terro_2754	COG1573	uracil-dna glycosylase
Terro_2755	COG1758	RNA polymerase activity
Terro_2756	COG0194	GDP metabolic process
Terro_2757	COG1132	(ABC) transporter
Terro_2758	COG1660	Displays ATPase and GTPase activities
Terro_2760	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
Terro_2761	COG1137	ATPase activity
Terro_2764	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_2765	COG0751	glycine-tRNA ligase activity
Terro_2766	COG0752	glycyl-tRNA synthetase alpha subunit
Terro_2769	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Terro_2770	COG1131	(ABC) transporter
Terro_2773	COG5002	protein histidine kinase activity
Terro_2774	COG0492	ferredoxin-NADP+ reductase activity
Terro_2776	COG3118	belongs to the thioredoxin family
Terro_2778	COG0494	nUDIX hydrolase
Terro_2779	COG0501	Belongs to the peptidase M48B family
Terro_2782	COG2239	Acts as a magnesium transporter
Terro_2784	COG1366	Belongs to the anti-sigma-factor antagonist family
Terro_2785	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
Terro_2787	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Terro_2789	COG0129	dihydroxy-acid dehydratase activity
Terro_2795	COG0673	inositol 2-dehydrogenase activity
Terro_2797	COG1070	Carbohydrate kinase
Terro_2798	COG2115	Belongs to the xylose isomerase family
Terro_2799	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Terro_2801	COG4952	isomerase
Terro_2804	COG2133	pyrroloquinoline quinone binding
Terro_2807	COG1216	Glycosyl transferase, family 2
Terro_2807	COG0463	Glycosyl transferase, family 2
Terro_2808	COG0726	polysaccharide deacetylase
Terro_2824	COG3409	Peptidoglycan-binding domain 1 protein
Terro_2824	COG3267	Type II secretory pathway component ExeA
Terro_2825	COG0489	protein tyrosine kinase activity
Terro_2826	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
Terro_2830	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
Terro_2833	COG2204	response regulator
Terro_2834	COG2204	response regulator
Terro_2837	COG1215	transferase activity, transferring glycosyl groups
Terro_2839	COG3706	GGDEF domain
Terro_2848	COG0673	inositol 2-dehydrogenase activity
Terro_2853	COG0673	inositol 2-dehydrogenase activity
Terro_2854	COG1349	DNA-binding transcription factor activity
Terro_2855	COG0673	inositol 2-dehydrogenase activity
Terro_2857	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Terro_2870	COG0596	Alpha beta hydrolase
Terro_2874	COG3459	Glycosyltransferase 36 associated
Terro_2876	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
Terro_2877	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
Terro_2878	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
Terro_2880	COG2885	chlorophyll binding
Terro_2882	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Terro_2882	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Terro_2892	COG0326	Molecular chaperone. Has ATPase activity
Terro_2895	COG2188	Transcriptional regulator
Terro_2897	COG3622	Belongs to the hyi family
Terro_2908	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
Terro_2911	COG4585	Histidine kinase
Terro_2912	COG2197	response regulator
Terro_2915	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_2916	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_2917	COG4948	Mandelate Racemase Muconate Lactonizing
Terro_2918	COG0738	Major facilitator superfamily
Terro_2919	COG1063	alcohol dehydrogenase
Terro_2922	COG1609	Transcriptional regulator
Terro_2951	COG0363	glucosamine-6-phosphate deaminase activity
Terro_2953	COG3525	Glycosyl hydrolase, family 20, catalytic domain
Terro_2957	COG1940	carbohydrate kinase activity
Terro_2966	COG0673	inositol 2-dehydrogenase activity
Terro_2968	COG5001	Diguanylate cyclase
Terro_2968	COG4251	negative regulation of phosphorylation
Terro_2968	COG2203	Gaf domain
Terro_2968	COG3706	GGDEF domain
Terro_2979	COG2223	nitrite transmembrane transporter activity
Terro_2987	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
Terro_3018	COG1131	(ABC) transporter
Terro_3022	COG2258	MOSC domain
Terro_3026	COG0577	efflux transmembrane transporter activity
Terro_3026	COG1136	(ABC) transporter
Terro_3039	COG3250	beta-galactosidase activity
Terro_3040	COG0531	amino acid
Terro_3045	COG1475	DNA binding
Terro_3047	COG0629	single-stranded DNA binding
Terro_3052	COG4774	siderophore transport
Terro_3063	COG2197	response regulator
Terro_3092	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Terro_3112	COG0582	viral genome integration into host DNA
Terro_3121	COG0582	viral genome integration into host DNA
Terro_3131	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_3144	COG2197	response regulator
Terro_3149	COG3852	Histidine kinase
Terro_3151	COG3300	MHYT domain
Terro_3151	COG5001	Diguanylate cyclase
Terro_3196	COG0745	RESPONSE REGULATOR receiver
Terro_3196	COG3706	GGDEF domain
Terro_3207	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Terro_3209	COG0297	glycogen (starch) synthase activity
Terro_3210	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Terro_3211	COG0083	homoserine kinase activity
Terro_3212	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
Terro_3214	COG2130	NADP-dependent
Terro_3218	COG3842	ATPase activity
Terro_3219	COG0812	UDP-N-acetylmuramate dehydrogenase activity
Terro_3223	COG1381	Involved in DNA repair and RecF pathway recombination
Terro_3227	COG0483	inositol monophosphate 1-phosphatase activity
Terro_3229	COG0314	molybdopterin synthase activity
Terro_3231	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
Terro_3232	COG1605	Chorismate mutase
Terro_3232	COG0077	Prephenate dehydratase
Terro_3235	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
Terro_3238	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
Terro_3240	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
Terro_3241	COG1595	DNA-templated transcription, initiation
Terro_3243	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
Terro_3246	COG0504	CTP synthase activity
Terro_3256	COG0254	rRNA binding
Terro_3257	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
Terro_3259	COG0667	Aldo Keto reductase
Terro_3261	COG2318	DinB family
Terro_3262	COG0312	modulator of DNA gyrase
Terro_3264	COG0312	modulator of DNA gyrase
Terro_3266	COG0322	excinuclease ABC activity
Terro_3267	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Terro_3268	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
Terro_3269	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
Terro_3270	COG2204	response regulator
Terro_3271	COG5000	phosphorelay sensor kinase activity
Terro_3276	COG1792	Involved in formation and maintenance of cell shape
Terro_3280	COG0561	phosphatase activity
Terro_3281	COG0741	lytic transglycosylase activity
Terro_3281	COG1196	nuclear chromosome segregation
Terro_3281	COG0739	heme binding
Terro_3283	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
Terro_3286	COG0527	aspartate kinase activity
Terro_3287	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
Terro_3288	COG2309	aminopeptidase activity
Terro_3290	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Terro_3292	COG2171	N-acyltransferase activity
Terro_3294	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
Terro_3297	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
Terro_3306	COG3118	belongs to the thioredoxin family
Terro_3312	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
Terro_3314	COG1968	undecaprenyl-diphosphatase activity
Terro_3322	COG2197	response regulator
Terro_3323	COG0552	protein localization to endoplasmic reticulum
Terro_3325	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Terro_3325	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
Terro_3328	COG1435	thymidine kinase activity
Terro_3331	COG0393	Putative heavy-metal-binding
Terro_3336	COG0513	Belongs to the DEAD box helicase family
Terro_3342	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Terro_3345	COG1187	pseudouridine synthase activity
Terro_3346	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
Terro_3348	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
Terro_3350	COG0180	Tryptophanyl-tRNA synthetase
Terro_3351	COG1994	Peptidase M50
Terro_3357	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Terro_3358	COG3706	GGDEF domain
Terro_3360	COG0667	Aldo Keto reductase
Terro_3365	COG4191	Histidine kinase
Terro_3366	COG2204	response regulator
Terro_3374	COG0598	Magnesium transport protein CorA
Terro_3378	COG0415	Belongs to the DNA photolyase family
Terro_3379	COG2202	Pas domain
Terro_3379	COG3920	Histidine kinase
Terro_3380	COG4251	negative regulation of phosphorylation
Terro_3382	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
Terro_3386	COG0546	phosphoglycolate phosphatase activity
Terro_3387	COG4191	Histidine kinase
Terro_3390	COG1012	belongs to the aldehyde dehydrogenase family
Terro_3394	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
Terro_3396	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
Terro_3398	COG0860	N-Acetylmuramoyl-L-alanine amidase
Terro_3401	COG2814	Major facilitator Superfamily
Terro_3409	COG1214	PFAM Peptidase M22, glycoprotease
Terro_3411	COG0688	phosphatidylethanolamine metabolic process
Terro_3412	COG1183	phosphatidylcholine synthase activity
Terro_3417	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
Terro_3418	COG1524	type I phosphodiesterase nucleotide pyrophosphatase
Terro_3419	COG0167	dihydroorotate dehydrogenase activity
Terro_3422	COG0138	bifunctional purine biosynthesis protein purh
Terro_3423	COG0457	Tetratricopeptide repeat
Terro_3424	COG0232	Belongs to the dGTPase family. Type 2 subfamily
Terro_3427	COG0488	(ABC) transporter
Terro_3429	COG0802	atpase or kinase
Terro_3432	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Terro_3432	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Terro_3434	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
Terro_3435	COG2814	Major facilitator Superfamily
Terro_3440	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
Terro_3441	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Terro_3444	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
Terro_3445	COG0772	Belongs to the SEDS family
Terro_3446	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
Terro_3447	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Terro_3448	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
Terro_3449	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
Terro_3453	COG0275	rRNA processing
Terro_3454	COG2001	Belongs to the MraZ family
Terro_3456	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
Terro_3459	COG4774	siderophore transport
Terro_3461	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
Terro_3462	COG1301	dicarboxylic acid transport
Terro_3465	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
Terro_3467	COG2323	membrane
Terro_3468	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Terro_3473	COG0583	DNA-binding transcription factor activity
Terro_3474	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
Terro_3475	COG0473	3-isopropylmalate dehydrogenase activity
Terro_3477	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
Terro_3478	COG0066	3-isopropylmalate dehydratase activity
Terro_3479	COG0129	dihydroxy-acid dehydratase activity
Terro_3481	COG0028	Belongs to the TPP enzyme family
Terro_3483	COG0440	acetolactate synthase activity
Terro_3484	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
Terro_3488	COG3852	Histidine kinase
Terro_3495	COG1595	DNA-templated transcription, initiation
Terro_3496	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
Terro_3498	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Terro_3499	COG0456	acetyltransferase
Terro_3499	COG0454	-acetyltransferase
Terro_3503	COG0006	proline dipeptidase activity
Terro_3508	COG0012	GTP binding
Terro_3510	COG3300	MHYT domain
Terro_3510	COG5001	Diguanylate cyclase
Terro_3511	COG2199	diguanylate cyclase activity
Terro_3511	COG2200	EAL domain
Terro_3517	COG5001	Diguanylate cyclase
Terro_3520	COG2116	formate transmembrane transporter activity
Terro_3521	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
Terro_3522	COG0195	Participates in both transcription termination and antitermination
Terro_3523	COG0779	Required for maturation of 30S ribosomal subunits
Terro_3524	COG3706	GGDEF domain
Terro_3524	COG0745	RESPONSE REGULATOR receiver
Terro_3527	COG0463	Glycosyl transferase, family 2
Terro_3528	COG0517	IMP dehydrogenase activity
Terro_3528	COG0516	GMP reductase activity
Terro_3532	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
Terro_3533	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Terro_3537	COG5002	protein histidine kinase activity
Terro_3537	COG5001	Diguanylate cyclase
Terro_3537	COG3447	MASE1 domain protein
Terro_3539	COG2151	metal-sulfur cluster biosynthetic enzyme
Terro_3545	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
Terro_3546	COG0494	nUDIX hydrolase
Terro_3547	COG1278	Cold shock
Terro_3548	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
Terro_3548	COG1796	DNA polymerase
Terro_3552	COG0372	Belongs to the citrate synthase family
Terro_3554	COG1104	cysteine desulfurase activity
Terro_3555	COG0482	sulfurtransferase activity
Terro_3559	COG1543	Belongs to the glycosyl hydrolase 57 family
Terro_3564	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Terro_3567	COG0789	Transcriptional regulator
Terro_3569	COG0300	oxidoreductase activity
Terro_3570	COG0484	heat shock protein binding
Terro_3572	COG0659	secondary active sulfate transmembrane transporter activity
Terro_3575	COG3254	rhamnose metabolic process
Terro_3577	COG0443	Heat shock 70 kDa protein
Terro_3583	COG3093	addiction module antidote protein HigA
Terro_3588	COG1459	type II secretion system
Terro_3589	COG0316	Belongs to the HesB IscA family
Terro_3592	COG1233	COG1233 Phytoene dehydrogenase and related
Terro_3594	COG0528	UMP kinase activity
Terro_3595	COG0514	ATP-dependent DNA helicase (RecQ)
Terro_3599	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
Terro_3600	COG0052	Belongs to the universal ribosomal protein uS2 family
Terro_3601	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Terro_3602	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
Terro_3604	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
Terro_3604	COG2755	lipolytic protein G-D-S-L family
Terro_3605	COG0577	efflux transmembrane transporter activity
Terro_3613	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
Terro_3615	COG2169	Transcriptional regulator
Terro_3615	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Terro_3619	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
Terro_3620	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
Terro_3621	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
Terro_3622	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Terro_3623	COG0131	Imidazoleglycerol-phosphate dehydratase
Terro_3626	COG4456	Virulence-associated protein
Terro_3628	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
Terro_3630	COG0107	imidazoleglycerol-phosphate synthase activity
Terro_3633	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
Terro_3639	COG2326	polyphosphate kinase activity
Terro_3642	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
Terro_3647	COG0404	The glycine cleavage system catalyzes the degradation of glycine
Terro_3649	COG3706	GGDEF domain
Terro_3652	COG0346	lactoylglutathione lyase activity
Terro_3654	COG0509	glycine decarboxylation via glycine cleavage system
Terro_3655	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Terro_3657	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Terro_3658	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
Terro_3674	COG0488	(ABC) transporter
Terro_3679	COG0386	Belongs to the glutathione peroxidase family
Terro_3680	COG1764	response to oxidative stress
Terro_3684	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
Terro_3684	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
Terro_3685	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
Terro_3686	COG0085	RNA polymerase activity
Terro_3687	COG0222	ribosome binding
Terro_3688	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
Terro_3689	COG0081	regulation of translation
Terro_3694	COG0203	ribosomal protein L17
Terro_3695	COG0202	RNA polymerase activity
Terro_3696	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
Terro_3697	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
Terro_3698	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
Terro_3699	COG0257	Belongs to the bacterial ribosomal protein bL36 family
Terro_3700	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
Terro_3702	COG0563	adenylate kinase activity
Terro_3703	COG0201	protein transport
Terro_3704	COG0200	Binds to the 23S rRNA
Terro_3705	COG1841	ribosomal large subunit assembly
Terro_3706	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
Terro_3707	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
Terro_3708	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
Terro_3709	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
Terro_3710	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
Terro_3711	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
Terro_3712	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
Terro_3713	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
Terro_3714	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
Terro_3715	COG0255	Belongs to the universal ribosomal protein uL29 family
Terro_3716	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
Terro_3717	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
Terro_3718	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
Terro_3719	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
Terro_3720	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
Terro_3721	COG0089	rRNA binding
Terro_3722	COG0088	Forms part of the polypeptide exit tunnel
Terro_3724	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
Terro_3725	COG0051	transcription antitermination factor activity, RNA binding
Terro_3731	COG3108	Peptidase M15
Terro_3733	COG0584	glycerophosphoryl diester phosphodiesterase
Terro_3737	COG0640	Transcriptional regulator
Terro_3738	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
Terro_3739	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
Terro_3740	COG0049	tRNA binding
Terro_3741	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
Terro_3744	COG0823	Involved in the tonB-independent uptake of proteins
Terro_3744	COG1506	peptidase
Terro_3744	COG4946	Tricorn protease homolog
Terro_3745	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_3747	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
Terro_3751	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Terro_3752	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
Terro_3759	COG0673	inositol 2-dehydrogenase activity
Terro_3760	COG3590	peptidase
Terro_3772	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
Terro_3773	COG1619	proteins homologs of microcin C7 resistance protein MccF
Terro_3774	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
Terro_3777	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
Terro_3781	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
Terro_3781	COG0321	lipoyl(octanoyl) transferase activity
Terro_3782	COG0196	riboflavin kinase activity
Terro_3783	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
Terro_3785	COG0793	Belongs to the peptidase S41A family
Terro_3788	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
Terro_3789	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
Terro_3790	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Terro_3793	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
Terro_3802	COG1953	Uracil, thiamine, allantoin
Terro_3803	COG3525	Glycosyl hydrolase, family 20, catalytic domain
Terro_3806	COG1609	Transcriptional regulator
Terro_3807	COG2814	Major facilitator Superfamily
Terro_3808	COG0445	tRNA wobble uridine modification
Terro_3810	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
Terro_3816	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
Terro_3817	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
Terro_3817	COG2755	lipolytic protein G-D-S-L family
Terro_3819	COG3361	conserved protein (COG2071)
Terro_3823	COG1476	TRANSCRIPTIONal
Terro_3826	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
Terro_3828	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
Terro_3829	COG0572	uridine kinase
Terro_3833	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
Terro_3836	COG1899	peptidyl-lysine modification to peptidyl-hypusine
Terro_3837	COG0745	RESPONSE REGULATOR receiver
Terro_3844	COG0567	Dehydrogenase, E1 component
Terro_3849	COG0355	proton-transporting ATP synthase activity, rotational mechanism
Terro_3850	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
Terro_3851	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
Terro_3852	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
Terro_3853	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
Terro_3854	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
Terro_3856	COG1819	glycosyl
Terro_3859	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
Terro_3862	COG0436	Aminotransferase
Terro_3863	COG2133	pyrroloquinoline quinone binding
Terro_3864	COG0745	RESPONSE REGULATOR receiver
Terro_3864	COG3706	GGDEF domain
Terro_3866	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
Terro_3868	COG3706	GGDEF domain
Terro_3869	COG0318	PFAM AMP-dependent synthetase and ligase
Terro_3870	COG0444	Belongs to the ABC transporter superfamily
Terro_3878	COG0469	pyruvate kinase activity
Terro_3881	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
Terro_3890	COG2894	cell division
Terro_3891	COG4964	Belongs to the GSP D family
Terro_3896	COG2885	chlorophyll binding
Terro_3901	COG3119	arylsulfatase activity
Terro_3902	COG0028	Belongs to the TPP enzyme family
Terro_3905	COG3250	beta-galactosidase activity
Terro_3917	COG1131	(ABC) transporter
Terro_3921	COG1305	Transglutaminase-like
Terro_3926	COG2308	Evidence 4 Homologs of previously reported genes of
Terro_3927	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Terro_3931	COG0667	Aldo Keto reductase
Terro_3932	COG1210	Utp--glucose-1-phosphate uridylyltransferase
Terro_3939	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Terro_3943	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
Terro_3945	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
Terro_3949	COG1181	Belongs to the D-alanine--D-alanine ligase family
Terro_3953	COG0708	Exodeoxyribonuclease III
Terro_3957	COG0017	Asparaginyl-tRNA synthetase
Terro_3961	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
Terro_3963	COG0681	Belongs to the peptidase S26 family
Terro_3967	COG1595	DNA-templated transcription, initiation
Terro_3972	COG3590	peptidase
Terro_3978	COG0251	oxidation-reduction process
Terro_3986	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
Terro_3988	COG0537	adenosine 5'-monophosphoramidase activity
Terro_3992	COG1663	tetraacyldisaccharide 4'-kinase activity
Terro_3993	COG1519	Transferase
Terro_3999	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
Terro_4002	COG0531	amino acid
Terro_4006	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
Terro_4012	COG1770	oligopeptidase
Terro_4021	COG1215	transferase activity, transferring glycosyl groups
Terro_4022	COG4932	domain protein
Terro_4022	COG1388	LysM domain
Terro_4023	COG3622	Belongs to the hyi family
Terro_4024	COG3622	Belongs to the hyi family
Terro_4028	COG4948	Mandelate Racemase Muconate Lactonizing
Terro_4031	COG0828	Belongs to the bacterial ribosomal protein bS21 family
Terro_4037	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
Terro_4038	COG0745	RESPONSE REGULATOR receiver
Terro_4038	COG3706	GGDEF domain
Terro_4039	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
Terro_4043	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
Terro_4045	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Terro_4057	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
Terro_4058	COG2814	Major facilitator Superfamily
Terro_4060	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
Terro_4063	COG0667	Aldo Keto reductase
Terro_4065	COG0406	alpha-ribazole phosphatase activity
Terro_4066	COG0251	oxidation-reduction process
Terro_4067	COG0251	oxidation-reduction process
Terro_4068	COG0305	Participates in initiation and elongation during chromosome replication
Terro_4068	COG0358	DNA primase activity
Terro_4070	COG0521	Mo-molybdopterin cofactor biosynthetic process
Terro_4073	COG0333	Belongs to the bacterial ribosomal protein bL32 family
Terro_4074	COG0416	fatty acid biosynthetic process
Terro_4078	COG1595	DNA-templated transcription, initiation
Terro_4081	COG0644	oxidoreductase
Terro_4082	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
Terro_4083	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Terro_4085	COG1012	belongs to the aldehyde dehydrogenase family
Terro_4087	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
Terro_4088	COG1160	GTP binding
Terro_4094	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
Terro_4099	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
Terro_4100	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
Terro_4101	COG0124	histidyl-tRNA synthetase
Terro_4103	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
Terro_4112	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_4114	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
Terro_4115	COG0438	transferase activity, transferring glycosyl groups
Terro_4116	COG2094	Belongs to the DNA glycosylase MPG family
Terro_4118	COG0540	Belongs to the ATCase OTCase family
Terro_4119	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Terro_4121	COG1793	dna ligase
Terro_4125	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
Terro_4126	COG2890	protein-(glutamine-N5) methyltransferase activity
Terro_4135	COG0542	response to heat
Terro_4136	COG0071	Belongs to the small heat shock protein (HSP20) family
Terro_4141	COG2272	Belongs to the type-B carboxylesterase lipase family
Terro_4145	COG1940	carbohydrate kinase activity
Terro_4147	COG0165	Argininosuccinate lyase
Terro_4154	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
Terro_4156	COG1104	cysteine desulfurase activity
Terro_4160	COG0316	Belongs to the HesB IscA family
Terro_4166	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
Terro_4168	COG0251	oxidation-reduction process
Terro_4169	COG0443	Heat shock 70 kDa protein
Terro_4172	COG0633	Ferredoxin
Terro_4173	COG2975	iron-sulfur cluster assembly
Terro_4175	COG1199	ATP-dependent helicase activity
Terro_4179	COG0754	glutathionylspermidine amidase activity
Terro_4182	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
Terro_4184	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
Terro_4185	COG0667	Aldo Keto reductase
Terro_4187	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
Terro_4188	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
Terro_4193	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
Terro_4194	COG2814	Major facilitator Superfamily
Terro_4197	COG2081	HI0933 family
Terro_4199	COG3265	gluconokinase activity
Terro_4203	COG3590	peptidase
Terro_4208	COG3751	2OG-Fe(II) oxygenase superfamily
Terro_4209	COG2271	Major facilitator Superfamily
Terro_4210	COG4948	Mandelate Racemase Muconate Lactonizing
Terro_4211	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
Terro_4213	COG2721	sulfolactate sulfo-lyase activity
Terro_4217	COG0667	Aldo Keto reductase
Terro_4220	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
Terro_4224	COG0531	amino acid
Terro_4225	COG3179	chitinase
Terro_4229	COG4948	Mandelate Racemase Muconate Lactonizing
Terro_4230	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_4232	COG1615	UPF0182 protein
Terro_4233	COG1982	Orn Lys Arg decarboxylase major
Terro_4235	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
Terro_4242	COG0642	Histidine kinase
Terro_4246	COG1136	(ABC) transporter
Terro_4246	COG0577	efflux transmembrane transporter activity
Terro_4247	COG1136	(ABC) transporter
Terro_4254	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
Terro_4255	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
Terro_4263	COG3537	Alpha-1,2-mannosidase
Terro_4270	COG3710	Transcriptional regulator
Terro_4284	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Terro_4285	COG1764	response to oxidative stress
Terro_4286	COG1194	a g-specific adenine glycosylase
Terro_4290	COG0481	GTPase activity
Terro_4293	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
Terro_4295	COG2865	translation initiation factor activity
Terro_4301	COG1230	cation diffusion facilitator family transporter
Terro_4303	COG3345	alpha-galactosidase
Terro_4304	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
Terro_4305	COG1085	galactose-1-phosphate uridylyltransferase
Terro_4307	COG1482	cell wall glycoprotein biosynthetic process
Terro_4308	COG0305	Participates in initiation and elongation during chromosome replication
Terro_4311	COG0154	amidase activity
Terro_4315	COG1904	glucuronate isomerase
Terro_4316	COG2186	Transcriptional regulator
Terro_4318	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_4322	COG1691	(AIR) carboxylase
Terro_4323	COG2271	Major facilitator Superfamily
Terro_4324	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Terro_4325	COG3040	lipid binding
Terro_4328	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
Terro_4330	COG2755	lipolytic protein G-D-S-L family
Terro_4330	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
Terro_4338	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
Terro_4341	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
Terro_4344	COG0493	'glutamate synthase
Terro_4350	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
Terro_4353	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
Terro_4356	COG0596	Alpha beta hydrolase
Terro_4357	COG1028	Short-chain dehydrogenase reductase Sdr
Terro_4360	COG2855	membrane
Terro_4362	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
Terro_4363	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Terro_4363	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
Terro_4370	COG0438	transferase activity, transferring glycosyl groups
Terro_4374	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
Terro_4375	COG0357	Ribosomal RNA small subunit methyltransferase G
Terro_4376	COG1192	Involved in chromosome partitioning
Terro_4377	COG1475	DNA binding
Terro_4379	COG0776	regulation of translation
Terro_4387	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
Terro_4389	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
Terro_4390	COG0592	DNA-directed DNA polymerase activity
Terro_4399	COG0230	Belongs to the bacterial ribosomal protein bL34 family