locus-tag class description AciPR4_0001 PF00308 Bacterial dnaA protein AciPR4_0001 PF08299 Bacterial dnaA protein helix-turn-helix AciPR4_0001 PF11638 DnaA N-terminal domain AciPR4_0003 PF00144 Beta-lactamase AciPR4_0004 PF00488 MutS domain V AciPR4_0004 PF01713 Smr domain AciPR4_0005 PF00248 Aldo/keto reductase family AciPR4_0007 PF00490 Delta-aminolevulinic acid dehydratase AciPR4_0011 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AciPR4_0011 PF07992 Pyridine nucleotide-disulphide oxidoreductase AciPR4_0012 PF01638 HxlR-like helix-turn-helix AciPR4_0017 PF05368 NmrA-like family AciPR4_0018 PF01638 HxlR-like helix-turn-helix AciPR4_0020 PF00324 Amino acid permease AciPR4_0025 PF00753 Metallo-beta-lactamase superfamily AciPR4_0025 PF16123 Hydroxyacylglutathione hydrolase C-terminus AciPR4_0026 PF01872 RibD C-terminal domain AciPR4_0028 PF00248 Aldo/keto reductase family AciPR4_0030 PF00893 Small Multidrug Resistance protein AciPR4_0031 PF01613 Flavin reductase like domain AciPR4_0033 PF00793 DAHP synthetase I family AciPR4_0039 PF00190 Cupin AciPR4_0040 PF00255 Glutathione peroxidase AciPR4_0041 PF00141 Peroxidase AciPR4_0044 PF00248 Aldo/keto reductase family AciPR4_0047 PF02687 FtsX-like permease family AciPR4_0047 PF12704 MacB-like periplasmic core domain AciPR4_0048 PF02687 FtsX-like permease family AciPR4_0048 PF12704 MacB-like periplasmic core domain AciPR4_0052 PF00106 short chain dehydrogenase AciPR4_0057 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AciPR4_0057 PF03466 LysR substrate binding domain AciPR4_0063 PF00561 alpha/beta hydrolase fold AciPR4_0069 PF01261 Xylose isomerase-like TIM barrel AciPR4_0070 PF00593 TonB dependent receptor AciPR4_0073 PF03099 Biotin/lipoate A/B protein ligase family AciPR4_0074 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AciPR4_0074 PF00364 Biotin-requiring enzyme AciPR4_0074 PF02817 e3 binding domain AciPR4_0079 PF02222 ATP-grasp domain AciPR4_0079 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AciPR4_0080 PF00731 AIR carboxylase AciPR4_0081 PF00665 Integrase core domain AciPR4_0081 PF13936 Helix-turn-helix domain AciPR4_0105 PF01370 NAD dependent epimerase/dehydratase family AciPR4_0106 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AciPR4_0106 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AciPR4_0106 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AciPR4_0107 PF00106 short chain dehydrogenase AciPR4_0110 PF00072 Response regulator receiver domain AciPR4_0110 PF00196 Bacterial regulatory proteins, luxR family AciPR4_0111 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_0111 PF13185 GAF domain AciPR4_0111 PF07730 Histidine kinase AciPR4_0111 PF13492 GAF domain AciPR4_0123 PF00239 Resolvase, N terminal domain AciPR4_0123 PF02796 Helix-turn-helix domain of resolvase AciPR4_0129 PF14659 Phage integrase, N-terminal SAM-like domain AciPR4_0129 PF00589 Phage integrase family AciPR4_0132 PF00266 Aminotransferase class-V AciPR4_0134 PF01592 NifU-like N terminal domain AciPR4_0135 PF01521 Iron-sulphur cluster biosynthesis AciPR4_0136 PF00005 ABC transporter AciPR4_0136 PF02687 FtsX-like permease family AciPR4_0136 PF12704 MacB-like periplasmic core domain AciPR4_0137 PF00561 alpha/beta hydrolase fold AciPR4_0138 PF00563 EAL domain AciPR4_0138 PF03707 Bacterial signalling protein N terminal repeat AciPR4_0138 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_0139 PF07743 HSCB C-terminal oligomerisation domain AciPR4_0139 PF00226 DnaJ domain AciPR4_0141 PF00012 Hsp70 protein AciPR4_0143 PF00227 Proteasome subunit AciPR4_0144 PF00004 ATPase family associated with various cellular activities (AAA) AciPR4_0144 PF07724 AAA domain (Cdc48 subfamily) AciPR4_0147 PF00923 Transaldolase/Fructose-6-phosphate aldolase AciPR4_0150 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) AciPR4_0151 PF07690 Major Facilitator Superfamily AciPR4_0154 PF02566 OsmC-like protein AciPR4_0156 PF00633 Helix-hairpin-helix motif AciPR4_0156 PF00730 HhH-GPD superfamily base excision DNA repair protein AciPR4_0156 PF14815 NUDIX domain AciPR4_0158 PF05193 Peptidase M16 inactive domain AciPR4_0158 PF00675 Insulinase (Peptidase family M16) AciPR4_0162 PF04542 Sigma-70 region 2 AciPR4_0162 PF03979 Sigma-70 factor, region 1.1 AciPR4_0162 PF04546 Sigma-70, non-essential region AciPR4_0162 PF04545 Sigma-70, region 4 AciPR4_0162 PF04539 Sigma-70 region 3 AciPR4_0162 PF00140 Sigma-70 factor, region 1.2 AciPR4_0176 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AciPR4_0177 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AciPR4_0180 PF05506 Domain of unknown function (DUF756) AciPR4_0180 PF04185 Phosphoesterase family AciPR4_0182 PF07690 Major Facilitator Superfamily AciPR4_0183 PF01568 Molydopterin dinucleotide binding domain AciPR4_0183 PF00384 Molybdopterin oxidoreductase AciPR4_0184 PF01321 Creatinase/Prolidase N-terminal domain AciPR4_0184 PF00557 Metallopeptidase family M24 AciPR4_0185 PF00593 TonB dependent receptor AciPR4_0186 PF04389 Peptidase family M28 AciPR4_0186 PF02225 PA domain AciPR4_0189 PF01022 Bacterial regulatory protein, arsR family AciPR4_0190 PF00873 AcrB/AcrD/AcrF family AciPR4_0191 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AciPR4_0192 PF02321 Outer membrane efflux protein AciPR4_0204 PF00529 HlyD membrane-fusion protein of T1SS AciPR4_0204 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AciPR4_0205 PF00873 AcrB/AcrD/AcrF family AciPR4_0206 PF00072 Response regulator receiver domain AciPR4_0206 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_0208 PF00593 TonB dependent receptor AciPR4_0209 PF00313 'Cold-shock' DNA-binding domain AciPR4_0211 PF00563 EAL domain AciPR4_0211 PF01590 GAF domain AciPR4_0211 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_0211 PF00360 Phytochrome region AciPR4_0212 PF00593 TonB dependent receptor AciPR4_0216 PF02548 Ketopantoate hydroxymethyltransferase AciPR4_0217 PF02569 Pantoate-beta-alanine ligase AciPR4_0218 PF04127 DNA / pantothenate metabolism flavoprotein AciPR4_0218 PF02441 Flavoprotein AciPR4_0219 PF02261 Aspartate decarboxylase AciPR4_0220 PF00593 TonB dependent receptor AciPR4_0222 PF00083 Sugar (and other) transporter AciPR4_0222 PF07690 Major Facilitator Superfamily AciPR4_0223 PF03150 Di-haem cytochrome c peroxidase AciPR4_0226 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AciPR4_0226 PF13360 PQQ-like domain AciPR4_0227 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AciPR4_0227 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AciPR4_0228 PF07732 Multicopper oxidase AciPR4_0230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AciPR4_0230 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AciPR4_0237 PF07969 Amidohydrolase family AciPR4_0243 PF00152 tRNA synthetases class II (D, K and N) AciPR4_0243 PF01336 OB-fold nucleic acid binding domain AciPR4_0247 PF09957 Bacterial antitoxin of type II TA system, VapB AciPR4_0254 PF06071 Protein of unknown function (DUF933) AciPR4_0254 PF01926 50S ribosome-binding GTPase AciPR4_0255 PF01810 LysE type translocator AciPR4_0259 PF07478 D-ala D-ala ligase C-terminus AciPR4_0259 PF01820 D-ala D-ala ligase N-terminus AciPR4_0261 PF05426 Alginate lyase AciPR4_0262 PF02611 CDP-diacylglycerol pyrophosphatase AciPR4_0264 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AciPR4_0264 PF01653 NAD-dependent DNA ligase adenylation domain AciPR4_0264 PF03120 NAD-dependent DNA ligase OB-fold domain AciPR4_0264 PF12826 Helix-hairpin-helix motif AciPR4_0264 PF00533 BRCA1 C Terminus (BRCT) domain AciPR4_0269 PF00994 Probable molybdopterin binding domain AciPR4_0275 PF01979 Amidohydrolase family AciPR4_0276 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AciPR4_0276 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AciPR4_0278 PF00156 Phosphoribosyl transferase domain AciPR4_0282 PF13411 MerR HTH family regulatory protein AciPR4_0284 PF00809 Pterin binding enzyme AciPR4_0285 PF02646 RmuC family AciPR4_0286 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_0286 PF00563 EAL domain AciPR4_0286 PF03707 Bacterial signalling protein N terminal repeat AciPR4_0287 PF00550 Phosphopantetheine attachment site AciPR4_0288 PF00109 Beta-ketoacyl synthase, N-terminal domain AciPR4_0288 PF02801 Beta-ketoacyl synthase, C-terminal domain AciPR4_0289 PF01554 MatE AciPR4_0300 PF00360 Phytochrome region AciPR4_0300 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_0300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_0300 PF01590 GAF domain AciPR4_0300 PF08446 PAS fold AciPR4_0301 PF00072 Response regulator receiver domain AciPR4_0302 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_0302 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_0302 PF00989 PAS fold AciPR4_0302 PF08447 PAS fold AciPR4_0310 PF00563 EAL domain AciPR4_0310 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_0310 PF03707 Bacterial signalling protein N terminal repeat AciPR4_0314 PF00561 alpha/beta hydrolase fold AciPR4_0318 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_0319 PF07690 Major Facilitator Superfamily AciPR4_0321 PF02504 Fatty acid synthesis protein AciPR4_0322 PF01783 Ribosomal L32p protein family AciPR4_0326 PF01230 HIT domain AciPR4_0327 PF16491 CAAX prenyl protease N-terminal, five membrane helices AciPR4_0327 PF01435 Peptidase family M48 AciPR4_0336 PF00723 Glycosyl hydrolases family 15 AciPR4_0340 PF00072 Response regulator receiver domain AciPR4_0341 PF08207 Elongation factor P (EF-P) KOW-like domain AciPR4_0341 PF09285 Elongation factor P, C-terminal AciPR4_0341 PF01132 Elongation factor P (EF-P) OB domain AciPR4_0342 PF07691 PA14 domain AciPR4_0342 PF00933 Glycosyl hydrolase family 3 N terminal domain AciPR4_0342 PF14310 Fibronectin type III-like domain AciPR4_0342 PF01915 Glycosyl hydrolase family 3 C-terminal domain AciPR4_0344 PF03928 Haem-degrading AciPR4_0345 PF07691 PA14 domain AciPR4_0345 PF02838 Glycosyl hydrolase family 20, domain 2 AciPR4_0345 PF00728 Glycosyl hydrolase family 20, catalytic domain AciPR4_0348 PF01336 OB-fold nucleic acid binding domain AciPR4_0348 PF00152 tRNA synthetases class II (D, K and N) AciPR4_0353 PF03129 Anticodon binding domain AciPR4_0353 PF13393 Histidyl-tRNA synthetase AciPR4_0357 PF00873 AcrB/AcrD/AcrF family AciPR4_0359 PF00873 AcrB/AcrD/AcrF family AciPR4_0360 PF13533 Biotin-lipoyl like AciPR4_0361 PF01040 UbiA prenyltransferase family AciPR4_0362 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AciPR4_0362 PF01409 tRNA synthetases class II core domain (F) AciPR4_0363 PF03484 tRNA synthetase B5 domain AciPR4_0363 PF03483 B3/4 domain AciPR4_0363 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AciPR4_0363 PF01588 Putative tRNA binding domain AciPR4_0363 PF03147 Ferredoxin-fold anticodon binding domain AciPR4_0364 PF13520 Amino acid permease AciPR4_0365 PF14698 Argininosuccinate lyase C-terminal AciPR4_0365 PF00206 Lyase AciPR4_0367 PF00480 ROK family AciPR4_0370 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AciPR4_0370 PF00384 Molybdopterin oxidoreductase AciPR4_0370 PF01568 Molydopterin dinucleotide binding domain AciPR4_0370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AciPR4_0370 PF12838 4Fe-4S dicluster domain AciPR4_0374 PF00849 RNA pseudouridylate synthase AciPR4_0375 PF01790 Prolipoprotein diacylglyceryl transferase AciPR4_0376 PF00578 AhpC/TSA family AciPR4_0377 PF05164 Cell division protein ZapA AciPR4_0384 PF00687 Ribosomal protein L1p/L10e family AciPR4_0385 PF00466 Ribosomal protein L10 AciPR4_0386 PF16320 Ribosomal protein L7/L12 dimerisation domain AciPR4_0386 PF00542 Ribosomal protein L7/L12 C-terminal domain AciPR4_0388 PF04563 RNA polymerase beta subunit AciPR4_0388 PF04561 RNA polymerase Rpb2, domain 2 AciPR4_0388 PF10385 RNA polymerase beta subunit external 1 domain AciPR4_0388 PF04565 RNA polymerase Rpb2, domain 3 AciPR4_0388 PF00562 RNA polymerase Rpb2, domain 6 AciPR4_0388 PF04560 RNA polymerase Rpb2, domain 7 AciPR4_0389 PF04998 RNA polymerase Rpb1, domain 5 AciPR4_0389 PF04997 RNA polymerase Rpb1, domain 1 AciPR4_0389 PF00623 RNA polymerase Rpb1, domain 2 AciPR4_0389 PF05000 RNA polymerase Rpb1, domain 4 AciPR4_0389 PF04983 RNA polymerase Rpb1, domain 3 AciPR4_0393 PF03544 Gram-negative bacterial TonB protein C-terminal AciPR4_0394 PF00072 Response regulator receiver domain AciPR4_0394 PF00486 Transcriptional regulatory protein, C terminal AciPR4_0403 PF00041 Fibronectin type III domain AciPR4_0403 PF00704 Glycosyl hydrolases family 18 AciPR4_0403 PF00553 Cellulose binding domain AciPR4_0404 PF00704 Glycosyl hydrolases family 18 AciPR4_0404 PF00041 Fibronectin type III domain AciPR4_0405 PF00529 HlyD membrane-fusion protein of T1SS AciPR4_0405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AciPR4_0406 PF00873 AcrB/AcrD/AcrF family AciPR4_0408 PF00933 Glycosyl hydrolase family 3 N terminal domain AciPR4_0408 PF07691 PA14 domain AciPR4_0408 PF14310 Fibronectin type III-like domain AciPR4_0408 PF01915 Glycosyl hydrolase family 3 C-terminal domain AciPR4_0409 PF02797 Chalcone and stilbene synthases, C-terminal domain AciPR4_0409 PF00195 Chalcone and stilbene synthases, N-terminal domain AciPR4_0411 PF01266 FAD dependent oxidoreductase AciPR4_0411 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AciPR4_0412 PF00550 Phosphopantetheine attachment site AciPR4_0413 PF02801 Beta-ketoacyl synthase, C-terminal domain AciPR4_0413 PF00109 Beta-ketoacyl synthase, N-terminal domain AciPR4_0415 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AciPR4_0415 PF00128 Alpha amylase, catalytic domain AciPR4_0416 PF13360 PQQ-like domain AciPR4_0416 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AciPR4_0417 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AciPR4_0417 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AciPR4_0418 PF17678 Glycosyl hydrolase family 92 N-terminal domain AciPR4_0418 PF07971 Glycosyl hydrolase family 92 AciPR4_0420 PF03275 UDP-galactopyranose mutase AciPR4_0422 PF02929 Beta galactosidase small chain AciPR4_0422 PF00703 Glycosyl hydrolases family 2 AciPR4_0422 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AciPR4_0422 PF02837 Glycosyl hydrolases family 2, sugar binding domain AciPR4_0422 PF16353 Domain of unknown function(DUF4981) AciPR4_0423 PF00704 Glycosyl hydrolases family 18 AciPR4_0423 PF00041 Fibronectin type III domain AciPR4_0426 PF04607 Region found in RelA / SpoT proteins AciPR4_0426 PF13291 ACT domain AciPR4_0426 PF02824 TGS domain AciPR4_0427 PF00005 ABC transporter AciPR4_0429 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AciPR4_0429 PF00326 Prolyl oligopeptidase family AciPR4_0431 PF01042 Endoribonuclease L-PSP AciPR4_0432 PF01641 SelR domain AciPR4_0433 PF00830 Ribosomal L28 family AciPR4_0434 PF00440 Bacterial regulatory proteins, tetR family AciPR4_0435 PF00857 Isochorismatase family AciPR4_0438 PF01548 Transposase AciPR4_0438 PF02371 Transposase IS116/IS110/IS902 family AciPR4_0439 PF00144 Beta-lactamase AciPR4_0440 PF02687 FtsX-like permease family AciPR4_0440 PF00005 ABC transporter AciPR4_0440 PF12704 MacB-like periplasmic core domain AciPR4_0441 PF01042 Endoribonuclease L-PSP AciPR4_0442 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AciPR4_0450 PF04542 Sigma-70 region 2 AciPR4_0450 PF08281 Sigma-70, region 4 AciPR4_0452 PF00829 Ribosomal prokaryotic L21 protein AciPR4_0453 PF01016 Ribosomal L27 protein AciPR4_0458 PF00248 Aldo/keto reductase family AciPR4_0463 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AciPR4_0463 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AciPR4_0465 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_0465 PF00563 EAL domain AciPR4_0465 PF03707 Bacterial signalling protein N terminal repeat AciPR4_0468 PF01593 Flavin containing amine oxidoreductase AciPR4_0470 PF00155 Aminotransferase class I and II AciPR4_0473 PF01179 Copper amine oxidase, enzyme domain AciPR4_0473 PF07833 Copper amine oxidase N-terminal domain AciPR4_0473 PF02727 Copper amine oxidase, N2 domain AciPR4_0473 PF02728 Copper amine oxidase, N3 domain AciPR4_0475 PF00083 Sugar (and other) transporter AciPR4_0476 PF00480 ROK family AciPR4_0476 PF01047 MarR family AciPR4_0478 PF16363 GDP-mannose 4,6 dehydratase AciPR4_0479 PF01370 NAD dependent epimerase/dehydratase family AciPR4_0480 PF03825 Nucleoside H+ symporter AciPR4_0481 PF01979 Amidohydrolase family AciPR4_0482 PF01425 Amidase AciPR4_0486 PF00343 Carbohydrate phosphorylase AciPR4_0487 PF09364 XFP N-terminal domain AciPR4_0487 PF09363 XFP C-terminal domain AciPR4_0487 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AciPR4_0488 PF00871 Acetokinase family AciPR4_0492 PF00535 Glycosyl transferase family 2 AciPR4_0493 PF02397 Bacterial sugar transferase AciPR4_0495 PF00593 TonB dependent receptor AciPR4_0498 PF01047 MarR family AciPR4_0498 PF00480 ROK family AciPR4_0499 PF02687 FtsX-like permease family AciPR4_0499 PF12704 MacB-like periplasmic core domain AciPR4_0501 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AciPR4_0501 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AciPR4_0502 PF01121 Dephospho-CoA kinase AciPR4_0503 PF00595 PDZ domain AciPR4_0504 PF00551 Formyl transferase AciPR4_0505 PF02769 AIR synthase related protein, C-terminal domain AciPR4_0505 PF00586 AIR synthase related protein, N-terminal domain AciPR4_0506 PF00202 Aminotransferase class-III AciPR4_0507 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AciPR4_0507 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AciPR4_0508 PF09137 Glucodextranase, domain N AciPR4_0508 PF00723 Glycosyl hydrolases family 15 AciPR4_0509 PF00456 Transketolase, thiamine diphosphate binding domain AciPR4_0509 PF02780 Transketolase, C-terminal domain AciPR4_0509 PF02779 Transketolase, pyrimidine binding domain AciPR4_0511 PF02502 Ribose/Galactose Isomerase AciPR4_0512 PF00106 short chain dehydrogenase AciPR4_0514 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AciPR4_0514 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AciPR4_0515 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AciPR4_0515 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AciPR4_0516 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AciPR4_0518 PF01433 Peptidase family M1 domain AciPR4_0518 PF11838 ERAP1-like C-terminal domain AciPR4_0519 PF16123 Hydroxyacylglutathione hydrolase C-terminus AciPR4_0519 PF00753 Metallo-beta-lactamase superfamily AciPR4_0520 PF05958 tRNA (Uracil-5-)-methyltransferase AciPR4_0520 PF01938 TRAM domain AciPR4_0522 PF03309 Type III pantothenate kinase AciPR4_0523 PF02237 Biotin protein ligase C terminal domain AciPR4_0523 PF03099 Biotin/lipoate A/B protein ligase family AciPR4_0523 PF08279 HTH domain AciPR4_0524 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AciPR4_0524 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AciPR4_0526 PF08264 Anticodon-binding domain of tRNA AciPR4_0526 PF00133 tRNA synthetases class I (I, L, M and V) AciPR4_0526 PF10458 Valyl tRNA synthetase tRNA binding arm AciPR4_0528 PF00756 Putative esterase AciPR4_0528 PF00331 Glycosyl hydrolase family 10 AciPR4_0529 PF13525 Outer membrane lipoprotein AciPR4_0530 PF00834 Ribulose-phosphate 3 epimerase family AciPR4_0531 PF01541 GIY-YIG catalytic domain AciPR4_0531 PF02151 UvrB/uvrC motif AciPR4_0531 PF08459 UvrC Helix-hairpin-helix N-terminal AciPR4_0532 PF01523 Putative modulator of DNA gyrase AciPR4_0533 PF01523 Putative modulator of DNA gyrase AciPR4_0534 PF12867 DinB superfamily AciPR4_0536 PF01207 Dihydrouridine synthase (Dus) AciPR4_0537 PF01197 Ribosomal protein L31 AciPR4_0539 PF00483 Nucleotidyl transferase AciPR4_0541 PF17757 UvrB interaction domain AciPR4_0541 PF03461 TRCF domain AciPR4_0541 PF02559 CarD-like/TRCF domain AciPR4_0541 PF00271 Helicase conserved C-terminal domain AciPR4_0541 PF00270 DEAD/DEAH box helicase AciPR4_0542 PF02934 GatB/GatE catalytic domain AciPR4_0542 PF02637 GatB domain AciPR4_0546 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AciPR4_0546 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AciPR4_0546 PF01842 ACT domain AciPR4_0547 PF03738 Glutathionylspermidine synthase preATP-grasp AciPR4_0549 PF00266 Aminotransferase class-V AciPR4_0551 PF00300 Histidine phosphatase superfamily (branch 1) AciPR4_0551 PF13456 Reverse transcriptase-like AciPR4_0552 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AciPR4_0555 PF00474 Sodium:solute symporter family AciPR4_0557 PF00885 6,7-dimethyl-8-ribityllumazine synthase AciPR4_0558 PF01029 NusB family AciPR4_0559 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AciPR4_0562 PF00440 Bacterial regulatory proteins, tetR family AciPR4_0563 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_0563 PF00072 Response regulator receiver domain AciPR4_0564 PF12704 MacB-like periplasmic core domain AciPR4_0564 PF02687 FtsX-like permease family AciPR4_0564 PF00005 ABC transporter AciPR4_0565 PF00248 Aldo/keto reductase family AciPR4_0566 PF00440 Bacterial regulatory proteins, tetR family AciPR4_0567 PF02615 Malate/L-lactate dehydrogenase AciPR4_0572 PF00535 Glycosyl transferase family 2 AciPR4_0573 PF01370 NAD dependent epimerase/dehydratase family AciPR4_0575 PF02954 Bacterial regulatory protein, Fis family AciPR4_0575 PF00158 Sigma-54 interaction domain AciPR4_0575 PF00072 Response regulator receiver domain AciPR4_0576 PF00158 Sigma-54 interaction domain AciPR4_0576 PF00072 Response regulator receiver domain AciPR4_0576 PF02954 Bacterial regulatory protein, Fis family AciPR4_0577 PF13439 Glycosyltransferase Family 4 AciPR4_0577 PF00534 Glycosyl transferases group 1 AciPR4_0580 PF13439 Glycosyltransferase Family 4 AciPR4_0580 PF00534 Glycosyl transferases group 1 AciPR4_0581 PF00535 Glycosyl transferase family 2 AciPR4_0582 PF02397 Bacterial sugar transferase AciPR4_0583 PF13614 AAA domain AciPR4_0584 PF01471 Putative peptidoglycan binding domain AciPR4_0584 PF13401 AAA domain AciPR4_0585 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AciPR4_0585 PF13807 G-rich domain on putative tyrosine kinase AciPR4_0585 PF02706 Chain length determinant protein AciPR4_0587 PF02563 Polysaccharide biosynthesis/export protein AciPR4_0587 PF10531 SLBB domain AciPR4_0587 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AciPR4_0595 PF03572 Peptidase family S41 AciPR4_0595 PF13180 PDZ domain AciPR4_0596 PF09312 SurA N-terminal domain AciPR4_0596 PF00639 PPIC-type PPIASE domain AciPR4_0597 PF01966 HD domain AciPR4_0600 PF01264 Chorismate synthase AciPR4_0601 PF01327 Polypeptide deformylase AciPR4_0602 PF02911 Formyl transferase, C-terminal domain AciPR4_0602 PF00551 Formyl transferase AciPR4_0603 PF01189 16S rRNA methyltransferase RsmB/F AciPR4_0603 PF01029 NusB family AciPR4_0604 PF03793 PASTA domain AciPR4_0604 PF00069 Protein kinase domain AciPR4_0605 PF01545 Cation efflux family AciPR4_0605 PF16916 Dimerisation domain of Zinc Transporter AciPR4_0606 PF01209 ubiE/COQ5 methyltransferase family AciPR4_0607 PF01761 3-dehydroquinate synthase AciPR4_0608 PF03741 Integral membrane protein TerC family AciPR4_0610 PF00902 Sec-independent protein translocase protein (TatC) AciPR4_0611 PF02416 mttA/Hcf106 family AciPR4_0613 PF03006 Haemolysin-III related AciPR4_0614 PF00135 Carboxylesterase family AciPR4_0617 PF03707 Bacterial signalling protein N terminal repeat AciPR4_0617 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_0617 PF00563 EAL domain AciPR4_0620 PF01119 DNA mismatch repair protein, C-terminal domain AciPR4_0620 PF08676 MutL C terminal dimerisation domain AciPR4_0622 PF02224 Cytidylate kinase AciPR4_0623 PF00313 'Cold-shock' DNA-binding domain AciPR4_0629 PF00107 Zinc-binding dehydrogenase AciPR4_0629 PF08240 Alcohol dehydrogenase GroES-like domain AciPR4_0633 PF12833 Helix-turn-helix domain AciPR4_0633 PF12852 Cupin AciPR4_0636 PF02779 Transketolase, pyrimidine binding domain AciPR4_0636 PF16870 2-oxoglutarate dehydrogenase C-terminal AciPR4_0636 PF16078 2-oxoglutarate dehydrogenase N-terminus AciPR4_0636 PF00676 Dehydrogenase E1 component AciPR4_0638 PF00593 TonB dependent receptor AciPR4_0639 PF03601 Conserved hypothetical protein 698 AciPR4_0641 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AciPR4_0641 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AciPR4_0641 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AciPR4_0641 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AciPR4_0645 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_0645 PF00072 Response regulator receiver domain AciPR4_0646 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_0646 PF00072 Response regulator receiver domain AciPR4_0646 PF01627 Hpt domain AciPR4_0646 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_0646 PF00672 HAMP domain AciPR4_0646 PF17149 Periplasmic sensor domain found in signal transduction proteins AciPR4_0647 PF01773 Na+ dependent nucleoside transporter N-terminus AciPR4_0647 PF07662 Na+ dependent nucleoside transporter C-terminus AciPR4_0647 PF07670 Nucleoside recognition AciPR4_0648 PF01048 Phosphorylase superfamily AciPR4_0649 PF00485 Phosphoribulokinase / Uridine kinase family AciPR4_0654 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AciPR4_0654 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AciPR4_0656 PF09856 Predicted transcriptional regulator (DUF2083) AciPR4_0656 PF01381 Helix-turn-helix AciPR4_0656 PF06114 IrrE N-terminal-like domain AciPR4_0657 PF01916 Deoxyhypusine synthase AciPR4_0658 PF02885 Glycosyl transferase family, helical bundle domain AciPR4_0658 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AciPR4_0658 PF00591 Glycosyl transferase family, a/b domain AciPR4_0659 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AciPR4_0660 PF00270 DEAD/DEAH box helicase AciPR4_0660 PF08494 DEAD/H associated AciPR4_0660 PF00271 Helicase conserved C-terminal domain AciPR4_0661 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AciPR4_0661 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AciPR4_0663 PF00912 Transglycosylase AciPR4_0663 PF00905 Penicillin binding protein transpeptidase domain AciPR4_0663 PF14814 Bifunctional transglycosylase second domain AciPR4_0664 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AciPR4_0664 PF04073 Aminoacyl-tRNA editing domain AciPR4_0664 PF03129 Anticodon binding domain AciPR4_0665 PF00578 AhpC/TSA family AciPR4_0666 PF00571 CBS domain AciPR4_0666 PF01380 SIS domain AciPR4_0667 PF00578 AhpC/TSA family AciPR4_0669 PF00749 tRNA synthetases class I (E and Q), catalytic domain AciPR4_0672 PF02542 YgbB family AciPR4_0673 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AciPR4_0675 PF11734 TilS substrate C-terminal domain AciPR4_0675 PF01171 PP-loop family AciPR4_0676 PF01434 Peptidase family M41 AciPR4_0676 PF06480 FtsH Extracellular AciPR4_0676 PF17862 AAA+ lid domain AciPR4_0676 PF00004 ATPase family associated with various cellular activities (AAA) AciPR4_0678 PF01738 Dienelactone hydrolase family AciPR4_0679 PF01381 Helix-turn-helix AciPR4_0679 PF07883 Cupin domain AciPR4_0681 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_0681 PF00563 EAL domain AciPR4_0681 PF00360 Phytochrome region AciPR4_0681 PF01590 GAF domain AciPR4_0687 PF00561 alpha/beta hydrolase fold AciPR4_0691 PF00154 recA bacterial DNA recombination protein AciPR4_0696 PF04542 Sigma-70 region 2 AciPR4_0696 PF08281 Sigma-70, region 4 AciPR4_0698 PF01467 Cytidylyltransferase-like AciPR4_0699 PF00067 Cytochrome P450 AciPR4_0700 PF00155 Aminotransferase class I and II AciPR4_0701 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AciPR4_0701 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AciPR4_0701 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AciPR4_0701 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AciPR4_0703 PF02348 Cytidylyltransferase AciPR4_0704 PF03572 Peptidase family S41 AciPR4_0704 PF00595 PDZ domain AciPR4_0705 PF00912 Transglycosylase AciPR4_0705 PF00905 Penicillin binding protein transpeptidase domain AciPR4_0706 PF01687 Riboflavin kinase AciPR4_0706 PF06574 FAD synthetase AciPR4_0707 PF12706 Beta-lactamase superfamily domain AciPR4_0707 PF03099 Biotin/lipoate A/B protein ligase family AciPR4_0709 PF01571 Aminomethyltransferase folate-binding domain AciPR4_0711 PF01048 Phosphorylase superfamily AciPR4_0714 PF01678 Diaminopimelate epimerase AciPR4_0715 PF02016 LD-carboxypeptidase N-terminal domain AciPR4_0715 PF17676 LD-carboxypeptidase C-terminal domain AciPR4_0716 PF08245 Mur ligase middle domain AciPR4_0716 PF02875 Mur ligase family, glutamate ligase domain AciPR4_0716 PF01225 Mur ligase family, catalytic domain AciPR4_0719 PF01145 SPFH domain / Band 7 family AciPR4_0719 PF16200 C-terminal region of band_7 AciPR4_0725 PF00107 Zinc-binding dehydrogenase AciPR4_0725 PF08240 Alcohol dehydrogenase GroES-like domain AciPR4_0726 PF00155 Aminotransferase class I and II AciPR4_0730 PF01431 Peptidase family M13 AciPR4_0730 PF05649 Peptidase family M13 AciPR4_0734 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AciPR4_0739 PF00005 ABC transporter AciPR4_0739 PF02687 FtsX-like permease family AciPR4_0739 PF12704 MacB-like periplasmic core domain AciPR4_0741 PF00593 TonB dependent receptor AciPR4_0744 PF01053 Cys/Met metabolism PLP-dependent enzyme AciPR4_0749 PF00484 Carbonic anhydrase AciPR4_0751 PF00916 Sulfate permease family AciPR4_0751 PF01740 STAS domain AciPR4_0752 PF00484 Carbonic anhydrase AciPR4_0755 PF01062 Bestrophin, RFP-TM, chloride channel AciPR4_0757 PF00115 Cytochrome C and Quinol oxidase polypeptide I AciPR4_0760 PF00005 ABC transporter AciPR4_0762 PF01648 4'-phosphopantetheinyl transferase superfamily AciPR4_0765 PF01661 Macro domain AciPR4_0766 PF04079 Segregation and condensation complex subunit ScpB AciPR4_0767 PF01479 S4 domain AciPR4_0767 PF00849 RNA pseudouridylate synthase AciPR4_0770 PF01625 Peptide methionine sulfoxide reductase AciPR4_0771 PF07969 Amidohydrolase family AciPR4_0774 PF02709 N-terminal domain of galactosyltransferase AciPR4_0774 PF00535 Glycosyl transferase family 2 AciPR4_0775 PF00271 Helicase conserved C-terminal domain AciPR4_0775 PF00270 DEAD/DEAH box helicase AciPR4_0778 PF13439 Glycosyltransferase Family 4 AciPR4_0778 PF00534 Glycosyl transferases group 1 AciPR4_0779 PF01138 3' exoribonuclease family, domain 1 AciPR4_0779 PF03725 3' exoribonuclease family, domain 2 AciPR4_0780 PF00072 Response regulator receiver domain AciPR4_0780 PF02954 Bacterial regulatory protein, Fis family AciPR4_0780 PF00158 Sigma-54 interaction domain AciPR4_0783 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AciPR4_0783 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AciPR4_0790 PF02308 MgtC family AciPR4_0792 PF03061 Thioesterase superfamily AciPR4_0793 PF01883 Iron-sulfur cluster assembly protein AciPR4_0793 PF10609 NUBPL iron-transfer P-loop NTPase AciPR4_0794 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AciPR4_0794 PF01628 HrcA protein C terminal domain AciPR4_0795 PF01025 GrpE AciPR4_0796 PF00684 DnaJ central domain AciPR4_0796 PF00226 DnaJ domain AciPR4_0796 PF01556 DnaJ C terminal domain AciPR4_0797 PF04452 RNA methyltransferase AciPR4_0798 PF03315 Serine dehydratase beta chain AciPR4_0798 PF03313 Serine dehydratase alpha chain AciPR4_0800 PF01078 Magnesium chelatase, subunit ChlI AciPR4_0800 PF13335 Magnesium chelatase, subunit ChlI C-terminal AciPR4_0802 PF07497 Rho termination factor, RNA-binding domain AciPR4_0802 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AciPR4_0802 PF07498 Rho termination factor, N-terminal domain AciPR4_0803 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_0803 PF00563 EAL domain AciPR4_0803 PF13426 PAS domain AciPR4_0804 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AciPR4_0804 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AciPR4_0806 PF00291 Pyridoxal-phosphate dependent enzyme AciPR4_0807 PF00654 Voltage gated chloride channel AciPR4_0813 PF00356 Bacterial regulatory proteins, lacI family AciPR4_0817 PF00480 ROK family AciPR4_0821 PF07690 Major Facilitator Superfamily AciPR4_0822 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_0822 PF07730 Histidine kinase AciPR4_0823 PF00072 Response regulator receiver domain AciPR4_0823 PF00196 Bacterial regulatory proteins, luxR family AciPR4_0825 PF03737 Aldolase/RraA AciPR4_0826 PF03841 L-seryl-tRNA selenium transferase AciPR4_0827 PF01042 Endoribonuclease L-PSP AciPR4_0829 PF01979 Amidohydrolase family AciPR4_0831 PF00005 ABC transporter AciPR4_0833 PF03932 CutC family AciPR4_0835 PF00072 Response regulator receiver domain AciPR4_0835 PF00196 Bacterial regulatory proteins, luxR family AciPR4_0836 PF00072 Response regulator receiver domain AciPR4_0836 PF00196 Bacterial regulatory proteins, luxR family AciPR4_0837 PF00691 OmpA family AciPR4_0838 PF00106 short chain dehydrogenase AciPR4_0839 PF09397 Ftsk gamma domain AciPR4_0839 PF01580 FtsK/SpoIIIE family AciPR4_0839 PF17854 FtsK alpha domain AciPR4_0842 PF02673 Bacitracin resistance protein BacA AciPR4_0844 PF00291 Pyridoxal-phosphate dependent enzyme AciPR4_0846 PF17770 Ribonuclease J C-terminal domain AciPR4_0846 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AciPR4_0846 PF00753 Metallo-beta-lactamase superfamily AciPR4_0848 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AciPR4_0848 PF00132 Bacterial transferase hexapeptide (six repeats) AciPR4_0848 PF14602 Hexapeptide repeat of succinyl-transferase AciPR4_0849 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AciPR4_0849 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AciPR4_0850 PF00291 Pyridoxal-phosphate dependent enzyme AciPR4_0852 PF12708 Pectate lyase superfamily protein AciPR4_0852 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AciPR4_0852 PF13229 Right handed beta helix region AciPR4_0853 PF00701 Dihydrodipicolinate synthetase family AciPR4_0854 PF06736 Protein of unknown function (DUF1211) AciPR4_0856 PF02073 Thermophilic metalloprotease (M29) AciPR4_0858 PF05173 Dihydrodipicolinate reductase, C-terminus AciPR4_0858 PF01113 Dihydrodipicolinate reductase, N-terminus AciPR4_0859 PF01842 ACT domain AciPR4_0859 PF00696 Amino acid kinase family AciPR4_0860 PF01118 Semialdehyde dehydrogenase, NAD binding domain AciPR4_0860 PF02774 Semialdehyde dehydrogenase, dimerisation domain AciPR4_0863 PF03477 ATP cone domain AciPR4_0865 PF01464 Transglycosylase SLT domain AciPR4_0867 PF00892 EamA-like transporter family AciPR4_0871 PF04085 rod shape-determining protein MreC AciPR4_0873 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AciPR4_0873 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AciPR4_0874 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_0874 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_0874 PF00672 HAMP domain AciPR4_0874 PF00989 PAS fold AciPR4_0875 PF02954 Bacterial regulatory protein, Fis family AciPR4_0875 PF00072 Response regulator receiver domain AciPR4_0875 PF00158 Sigma-54 interaction domain AciPR4_0876 PF01926 50S ribosome-binding GTPase AciPR4_0876 PF07650 KH domain AciPR4_0877 PF03471 Transporter associated domain AciPR4_0877 PF00571 CBS domain AciPR4_0878 PF02130 Uncharacterized protein family UPF0054 AciPR4_0879 PF02562 PhoH-like protein AciPR4_0880 PF04226 Transglycosylase associated protein AciPR4_0881 PF00593 TonB dependent receptor AciPR4_0882 PF01649 Ribosomal protein S20 AciPR4_0883 PF03717 Penicillin-binding Protein dimerisation domain AciPR4_0883 PF05223 NTF2-like N-terminal transpeptidase domain AciPR4_0883 PF00905 Penicillin binding protein transpeptidase domain AciPR4_0884 PF01098 Cell cycle protein AciPR4_0886 PF10150 Ribonuclease E/G family AciPR4_0886 PF00575 S1 RNA binding domain AciPR4_0886 PF00575 S1 RNA binding domain AciPR4_0886 PF10150 Ribonuclease E/G family AciPR4_0888 PF07690 Major Facilitator Superfamily AciPR4_0889 PF00557 Metallopeptidase family M24 AciPR4_0889 PF05195 Aminopeptidase P, N-terminal domain AciPR4_0891 PF00535 Glycosyl transferase family 2 AciPR4_0892 PF07859 alpha/beta hydrolase fold AciPR4_0897 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AciPR4_0897 PF01488 Shikimate / quinate 5-dehydrogenase AciPR4_0897 PF08501 Shikimate dehydrogenase substrate binding domain AciPR4_0898 PF00436 Single-strand binding protein family AciPR4_0899 PF00892 EamA-like transporter family AciPR4_0901 PF00535 Glycosyl transferase family 2 AciPR4_0904 PF04238 Protein of unknown function (DUF420) AciPR4_0905 PF01040 UbiA prenyltransferase family AciPR4_0906 PF01594 AI-2E family transporter AciPR4_0907 PF01202 Shikimate kinase AciPR4_0909 PF04542 Sigma-70 region 2 AciPR4_0909 PF08281 Sigma-70, region 4 AciPR4_0910 PF00899 ThiF family AciPR4_0911 PF01225 Mur ligase family, catalytic domain AciPR4_0911 PF02875 Mur ligase family, glutamate ligase domain AciPR4_0911 PF08245 Mur ligase middle domain AciPR4_0914 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AciPR4_0914 PF00953 Glycosyl transferase family 4 AciPR4_0915 PF02875 Mur ligase family, glutamate ligase domain AciPR4_0915 PF08245 Mur ligase middle domain AciPR4_0916 PF01098 Cell cycle protein AciPR4_0917 PF03033 Glycosyltransferase family 28 N-terminal domain AciPR4_0917 PF04101 Glycosyltransferase family 28 C-terminal domain AciPR4_0919 PF02875 Mur ligase family, glutamate ligase domain AciPR4_0919 PF08245 Mur ligase middle domain AciPR4_0919 PF01225 Mur ligase family, catalytic domain AciPR4_0920 PF03799 Cell division protein FtsQ AciPR4_0920 PF08478 POTRA domain, FtsQ-type AciPR4_0921 PF02491 SHS2 domain inserted in FTSA AciPR4_0923 PF00091 Tubulin/FtsZ family, GTPase domain AciPR4_0923 PF12327 FtsZ family, C-terminal domain AciPR4_0924 PF03793 PASTA domain AciPR4_0924 PF03717 Penicillin-binding Protein dimerisation domain AciPR4_0924 PF00905 Penicillin binding protein transpeptidase domain AciPR4_0925 PF01256 Carbohydrate kinase AciPR4_0925 PF03853 YjeF-related protein N-terminus AciPR4_0926 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AciPR4_0927 PF00561 alpha/beta hydrolase fold AciPR4_0928 PF01965 DJ-1/PfpI family AciPR4_0928 PF12833 Helix-turn-helix domain AciPR4_0930 PF00210 Ferritin-like domain AciPR4_0931 PF12848 ABC transporter AciPR4_0931 PF00005 ABC transporter AciPR4_0931 PF16326 ABC transporter C-terminal domain AciPR4_0932 PF01757 Acyltransferase family AciPR4_0935 PF00248 Aldo/keto reductase family AciPR4_0937 PF01520 N-acetylmuramoyl-L-alanine amidase AciPR4_0942 PF00814 Glycoprotease family AciPR4_0943 PF00583 Acetyltransferase (GNAT) family AciPR4_0944 PF02666 Phosphatidylserine decarboxylase AciPR4_0945 PF01066 CDP-alcohol phosphatidyltransferase AciPR4_0950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AciPR4_0950 PF02403 Seryl-tRNA synthetase N-terminal domain AciPR4_0951 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase AciPR4_0952 PF01180 Dihydroorotate dehydrogenase AciPR4_0954 PF01808 AICARFT/IMPCHase bienzyme AciPR4_0954 PF02142 MGS-like domain AciPR4_0956 PF13286 Phosphohydrolase-associated domain AciPR4_0956 PF01966 HD domain AciPR4_0959 PF01522 Polysaccharide deacetylase AciPR4_0959 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain AciPR4_0961 PF00072 Response regulator receiver domain AciPR4_0961 PF00196 Bacterial regulatory proteins, luxR family AciPR4_0962 PF07992 Pyridine nucleotide-disulphide oxidoreductase AciPR4_0963 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_0963 PF00989 PAS fold AciPR4_0963 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_0965 PF12833 Helix-turn-helix domain AciPR4_0966 PF12833 Helix-turn-helix domain AciPR4_0967 PF12833 Helix-turn-helix domain AciPR4_0968 PF12833 Helix-turn-helix domain AciPR4_0969 PF12833 Helix-turn-helix domain AciPR4_0970 PF08534 Redoxin AciPR4_0972 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AciPR4_0974 PF00037 4Fe-4S binding domain AciPR4_0976 PF00291 Pyridoxal-phosphate dependent enzyme AciPR4_0977 PF02597 ThiS family AciPR4_0980 PF00004 ATPase family associated with various cellular activities (AAA) AciPR4_0980 PF05362 Lon protease (S16) C-terminal proteolytic domain AciPR4_0980 PF02190 ATP-dependent protease La (LON) substrate-binding domain AciPR4_0981 PF10431 C-terminal, D2-small domain, of ClpB protein AciPR4_0981 PF06689 ClpX C4-type zinc finger AciPR4_0981 PF07724 AAA domain (Cdc48 subfamily) AciPR4_0982 PF00574 Clp protease AciPR4_0983 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AciPR4_0983 PF05698 Bacterial trigger factor protein (TF) C-terminus AciPR4_0983 PF05697 Bacterial trigger factor protein (TF) AciPR4_0985 PF03167 Uracil DNA glycosylase superfamily AciPR4_0987 PF02861 Clp amino terminal domain, pathogenicity island component AciPR4_0987 PF10431 C-terminal, D2-small domain, of ClpB protein AciPR4_0987 PF07724 AAA domain (Cdc48 subfamily) AciPR4_0987 PF17871 AAA lid domain AciPR4_0987 PF00004 ATPase family associated with various cellular activities (AAA) AciPR4_0988 PF00005 ABC transporter AciPR4_0990 PF08335 GlnD PII-uridylyltransferase AciPR4_0990 PF01966 HD domain AciPR4_0991 PF00543 Nitrogen regulatory protein P-II AciPR4_0992 PF00909 Ammonium Transporter Family AciPR4_0994 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AciPR4_1000 PF00180 Isocitrate/isopropylmalate dehydrogenase AciPR4_1001 PF06039 Malate:quinone oxidoreductase (Mqo) AciPR4_1003 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AciPR4_1004 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AciPR4_1005 PF01244 Membrane dipeptidase (Peptidase family M19) AciPR4_1010 PF13183 4Fe-4S dicluster domain AciPR4_1010 PF13085 2Fe-2S iron-sulfur cluster binding domain AciPR4_1011 PF02910 Fumarate reductase flavoprotein C-term AciPR4_1011 PF00890 FAD binding domain AciPR4_1012 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AciPR4_1015 PF01725 Ham1 family AciPR4_1016 PF00294 pfkB family carbohydrate kinase AciPR4_1018 PF01435 Peptidase family M48 AciPR4_1019 PF14489 QueF-like protein AciPR4_1023 PF00296 Luciferase-like monooxygenase AciPR4_1024 PF04551 GcpE protein AciPR4_1031 PF01047 MarR family AciPR4_1032 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AciPR4_1038 PF00072 Response regulator receiver domain AciPR4_1038 PF00486 Transcriptional regulatory protein, C terminal AciPR4_1039 PF00672 HAMP domain AciPR4_1039 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_1039 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_1041 PF00873 AcrB/AcrD/AcrF family AciPR4_1042 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AciPR4_1046 PF00578 AhpC/TSA family AciPR4_1047 PF00248 Aldo/keto reductase family AciPR4_1048 PF02465 Flagellar hook-associated protein 2 N-terminus AciPR4_1048 PF07196 Flagellin hook IN motif AciPR4_1048 PF07195 Flagellar hook-associated protein 2 C-terminus AciPR4_1055 PF03928 Haem-degrading AciPR4_1056 PF02913 FAD linked oxidases, C-terminal domain AciPR4_1056 PF01565 FAD binding domain AciPR4_1056 PF13183 4Fe-4S dicluster domain AciPR4_1057 PF00578 AhpC/TSA family AciPR4_1059 PF07690 Major Facilitator Superfamily AciPR4_1060 PF16123 Hydroxyacylglutathione hydrolase C-terminus AciPR4_1060 PF00753 Metallo-beta-lactamase superfamily AciPR4_1062 PF08240 Alcohol dehydrogenase GroES-like domain AciPR4_1062 PF00107 Zinc-binding dehydrogenase AciPR4_1066 PF01227 GTP cyclohydrolase I AciPR4_1067 PF01509 TruB family pseudouridylate synthase (N terminal domain) AciPR4_1067 PF16198 tRNA pseudouridylate synthase B C-terminal domain AciPR4_1068 PF13472 GDSL-like Lipase/Acylhydrolase family AciPR4_1069 PF12704 MacB-like periplasmic core domain AciPR4_1069 PF02687 FtsX-like permease family AciPR4_1069 PF00005 ABC transporter AciPR4_1070 PF02687 FtsX-like permease family AciPR4_1070 PF12704 MacB-like periplasmic core domain AciPR4_1070 PF00005 ABC transporter AciPR4_1071 PF01638 HxlR-like helix-turn-helix AciPR4_1073 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AciPR4_1074 PF00069 Protein kinase domain AciPR4_1074 PF03793 PASTA domain AciPR4_1089 PF00004 ATPase family associated with various cellular activities (AAA) AciPR4_1089 PF10431 C-terminal, D2-small domain, of ClpB protein AciPR4_1089 PF07724 AAA domain (Cdc48 subfamily) AciPR4_1089 PF17871 AAA lid domain AciPR4_1090 PF16671 Actin cross-linking domain AciPR4_1090 PF04717 Type VI secretion system, phage-baseplate injector AciPR4_1094 PF00593 TonB dependent receptor AciPR4_1104 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AciPR4_1105 PF03702 Anhydro-N-acetylmuramic acid kinase AciPR4_1106 PF00488 MutS domain V AciPR4_1106 PF05190 MutS family domain IV AciPR4_1106 PF05192 MutS domain III AciPR4_1106 PF05188 MutS domain II AciPR4_1106 PF01624 MutS domain I AciPR4_1112 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AciPR4_1112 PF01488 Shikimate / quinate 5-dehydrogenase AciPR4_1112 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AciPR4_1113 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AciPR4_1113 PF03900 Porphobilinogen deaminase, C-terminal domain AciPR4_1115 PF00633 Helix-hairpin-helix motif AciPR4_1115 PF00730 HhH-GPD superfamily base excision DNA repair protein AciPR4_1117 PF09335 SNARE associated Golgi protein AciPR4_1118 PF03773 Predicted permease AciPR4_1120 PF00691 OmpA family AciPR4_1120 PF13677 Membrane MotB of proton-channel complex MotA/MotB AciPR4_1121 PF01618 MotA/TolQ/ExbB proton channel family AciPR4_1122 PF06289 Flagellar and Swarming motility proteins AciPR4_1123 PF07196 Flagellin hook IN motif AciPR4_1123 PF00669 Bacterial flagellin N-terminal helical region AciPR4_1123 PF00700 Bacterial flagellin C-terminal helical region AciPR4_1124 PF00175 Oxidoreductase NAD-binding domain AciPR4_1124 PF00667 FAD binding domain AciPR4_1124 PF00258 Flavodoxin AciPR4_1125 PF08448 PAS fold AciPR4_1125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_1125 PF00072 Response regulator receiver domain AciPR4_1125 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_1125 PF13188 PAS domain AciPR4_1126 PF08240 Alcohol dehydrogenase GroES-like domain AciPR4_1126 PF00107 Zinc-binding dehydrogenase AciPR4_1129 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AciPR4_1129 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AciPR4_1130 PF01842 ACT domain AciPR4_1130 PF10369 Small subunit of acetolactate synthase AciPR4_1131 PF00205 Thiamine pyrophosphate enzyme, central domain AciPR4_1131 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AciPR4_1131 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AciPR4_1132 PF00920 Dehydratase family AciPR4_1134 PF00694 Aconitase C-terminal domain AciPR4_1135 PF00330 Aconitase family (aconitate hydratase) AciPR4_1136 PF00180 Isocitrate/isopropylmalate dehydrogenase AciPR4_1137 PF00682 HMGL-like AciPR4_1137 PF08502 LeuA allosteric (dimerisation) domain AciPR4_1138 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AciPR4_1138 PF03466 LysR substrate binding domain AciPR4_1144 PF01370 NAD dependent epimerase/dehydratase family AciPR4_1145 PF04239 Protein of unknown function (DUF421) AciPR4_1147 PF13193 AMP-binding enzyme C-terminal domain AciPR4_1147 PF00501 AMP-binding enzyme AciPR4_1147 PF16177 Acetyl-coenzyme A synthetase N-terminus AciPR4_1148 PF00672 HAMP domain AciPR4_1148 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_1148 PF13426 PAS domain AciPR4_1148 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_1150 PF00375 Sodium:dicarboxylate symporter family AciPR4_1151 PF02779 Transketolase, pyrimidine binding domain AciPR4_1151 PF02780 Transketolase, C-terminal domain AciPR4_1151 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AciPR4_1153 PF00593 TonB dependent receptor AciPR4_1153 PF07715 TonB-dependent Receptor Plug Domain AciPR4_1154 PF18331 PKHD-type hydroxylase C-terminal domain AciPR4_1154 PF13640 2OG-Fe(II) oxygenase superfamily AciPR4_1157 PF02381 MraZ protein, putative antitoxin-like AciPR4_1158 PF01795 MraW methylase family AciPR4_1160 PF03717 Penicillin-binding Protein dimerisation domain AciPR4_1160 PF00905 Penicillin binding protein transpeptidase domain AciPR4_1161 PF01925 Sulfite exporter TauE/SafE AciPR4_1162 PF01225 Mur ligase family, catalytic domain AciPR4_1162 PF08245 Mur ligase middle domain AciPR4_1162 PF02875 Mur ligase family, glutamate ligase domain AciPR4_1164 PF09312 SurA N-terminal domain AciPR4_1164 PF00639 PPIC-type PPIASE domain AciPR4_1167 PF01040 UbiA prenyltransferase family AciPR4_1171 PF00800 Prephenate dehydratase AciPR4_1171 PF01817 Chorismate mutase type II AciPR4_1172 PF05362 Lon protease (S16) C-terminal proteolytic domain AciPR4_1172 PF00004 ATPase family associated with various cellular activities (AAA) AciPR4_1172 PF02190 ATP-dependent protease La (LON) substrate-binding domain AciPR4_1174 PF02391 MoaE protein AciPR4_1176 PF00459 Inositol monophosphatase family AciPR4_1178 PF00037 4Fe-4S binding domain AciPR4_1179 PF11967 Recombination protein O N terminal AciPR4_1179 PF02565 Recombination protein O C terminal AciPR4_1182 PF13426 PAS domain AciPR4_1182 PF02954 Bacterial regulatory protein, Fis family AciPR4_1182 PF00158 Sigma-54 interaction domain AciPR4_1183 PF06491 Disulphide isomerase AciPR4_1184 PF01565 FAD binding domain AciPR4_1184 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AciPR4_1185 PF00005 ABC transporter AciPR4_1185 PF08402 TOBE domain AciPR4_1186 PF00528 Binding-protein-dependent transport system inner membrane component AciPR4_1188 PF00291 Pyridoxal-phosphate dependent enzyme AciPR4_1189 PF00288 GHMP kinases N terminal domain AciPR4_1196 PF00704 Glycosyl hydrolases family 18 AciPR4_1201 PF00248 Aldo/keto reductase family AciPR4_1203 PF01965 DJ-1/PfpI family AciPR4_1203 PF12833 Helix-turn-helix domain AciPR4_1204 PF05199 GMC oxidoreductase AciPR4_1204 PF00732 GMC oxidoreductase AciPR4_1205 PF00529 HlyD membrane-fusion protein of T1SS AciPR4_1205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AciPR4_1206 PF00873 AcrB/AcrD/AcrF family AciPR4_1207 PF02321 Outer membrane efflux protein AciPR4_1211 PF00107 Zinc-binding dehydrogenase AciPR4_1211 PF08240 Alcohol dehydrogenase GroES-like domain AciPR4_1215 PF00355 Rieske [2Fe-2S] domain AciPR4_1216 PF00033 Cytochrome b/b6/petB AciPR4_1216 PF00032 Cytochrome b(C-terminal)/b6/petD AciPR4_1217 PF00171 Aldehyde dehydrogenase family AciPR4_1219 PF00072 Response regulator receiver domain AciPR4_1219 PF00196 Bacterial regulatory proteins, luxR family AciPR4_1220 PF13185 GAF domain AciPR4_1220 PF07730 Histidine kinase AciPR4_1220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_1220 PF13492 GAF domain AciPR4_1221 PF00561 alpha/beta hydrolase fold AciPR4_1224 PF00691 OmpA family AciPR4_1229 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AciPR4_1231 PF01761 3-dehydroquinate synthase AciPR4_1232 PF00480 ROK family AciPR4_1236 PF13439 Glycosyltransferase Family 4 AciPR4_1236 PF00534 Glycosyl transferases group 1 AciPR4_1237 PF01370 NAD dependent epimerase/dehydratase family AciPR4_1238 PF16363 GDP-mannose 4,6 dehydratase AciPR4_1239 PF07730 Histidine kinase AciPR4_1240 PF00072 Response regulator receiver domain AciPR4_1240 PF00196 Bacterial regulatory proteins, luxR family AciPR4_1244 PF00884 Sulfatase AciPR4_1245 PF00639 PPIC-type PPIASE domain AciPR4_1245 PF09312 SurA N-terminal domain AciPR4_1246 PF03781 Sulfatase-modifying factor enzyme 1 AciPR4_1248 PF00117 Glutamine amidotransferase class-I AciPR4_1250 PF08207 Elongation factor P (EF-P) KOW-like domain AciPR4_1250 PF09285 Elongation factor P, C-terminal AciPR4_1250 PF01132 Elongation factor P (EF-P) OB domain AciPR4_1251 PF12146 Serine aminopeptidase, S33 AciPR4_1252 PF00708 Acylphosphatase AciPR4_1253 PF00156 Phosphoribosyl transferase domain AciPR4_1254 PF08240 Alcohol dehydrogenase GroES-like domain AciPR4_1254 PF00107 Zinc-binding dehydrogenase AciPR4_1259 PF02601 Exonuclease VII, large subunit AciPR4_1259 PF13742 OB-fold nucleic acid binding domain AciPR4_1260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AciPR4_1260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AciPR4_1260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AciPR4_1260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AciPR4_1261 PF01479 S4 domain AciPR4_1265 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_1266 PF00593 TonB dependent receptor AciPR4_1268 PF00476 DNA polymerase family A AciPR4_1268 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AciPR4_1268 PF01367 5'-3' exonuclease, C-terminal SAM fold AciPR4_1269 PF01590 GAF domain AciPR4_1269 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_1269 PF00360 Phytochrome region AciPR4_1269 PF00563 EAL domain AciPR4_1270 PF02547 Queuosine biosynthesis protein AciPR4_1273 PF02687 FtsX-like permease family AciPR4_1273 PF00005 ABC transporter AciPR4_1273 PF12704 MacB-like periplasmic core domain AciPR4_1274 PF03551 Transcriptional regulator PadR-like family AciPR4_1275 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AciPR4_1275 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AciPR4_1276 PF16369 C-terminal lipocalin-like domain AciPR4_1276 PF04616 Glycosyl hydrolases family 43 AciPR4_1278 PF01066 CDP-alcohol phosphatidyltransferase AciPR4_1280 PF03458 UPF0126 domain AciPR4_1284 PF00206 Lyase AciPR4_1284 PF10415 Fumarase C C-terminus AciPR4_1286 PF05681 Fumarate hydratase (Fumerase) AciPR4_1286 PF05683 Fumarase C-terminus AciPR4_1289 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_1289 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_1291 PF00005 ABC transporter AciPR4_1292 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AciPR4_1293 PF00873 AcrB/AcrD/AcrF family AciPR4_1296 PF17678 Glycosyl hydrolase family 92 N-terminal domain AciPR4_1296 PF07971 Glycosyl hydrolase family 92 AciPR4_1297 PF02091 Glycyl-tRNA synthetase alpha subunit AciPR4_1298 PF05746 DALR anticodon binding domain AciPR4_1298 PF02092 Glycyl-tRNA synthetase beta subunit AciPR4_1302 PF00005 ABC transporter AciPR4_1302 PF12399 Branched-chain amino acid ATP-binding cassette transporter AciPR4_1303 PF04552 Sigma-54, DNA binding domain AciPR4_1303 PF04963 Sigma-54 factor, core binding domain AciPR4_1303 PF00309 Sigma-54 factor, Activator interacting domain (AID) AciPR4_1305 PF03668 P-loop ATPase protein family AciPR4_1306 PF00664 ABC transporter transmembrane region AciPR4_1306 PF00005 ABC transporter AciPR4_1307 PF08340 Domain of unknown function (DUF1732) AciPR4_1307 PF03755 YicC-like family, N-terminal region AciPR4_1308 PF00625 Guanylate kinase AciPR4_1309 PF01192 RNA polymerase Rpb6 AciPR4_1310 PF03167 Uracil DNA glycosylase superfamily AciPR4_1311 PF04851 Type III restriction enzyme, res subunit AciPR4_1311 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AciPR4_1311 PF18074 Primosomal protein N C-terminal domain AciPR4_1311 PF17764 3′ DNA-binding domain (3′BD) AciPR4_1311 PF00271 Helicase conserved C-terminal domain AciPR4_1312 PF00216 Bacterial DNA-binding protein AciPR4_1313 PF00692 dUTPase AciPR4_1314 PF00196 Bacterial regulatory proteins, luxR family AciPR4_1314 PF00072 Response regulator receiver domain AciPR4_1316 PF03279 Bacterial lipid A biosynthesis acyltransferase AciPR4_1317 PF00132 Bacterial transferase hexapeptide (six repeats) AciPR4_1317 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AciPR4_1320 PF02219 Methylenetetrahydrofolate reductase AciPR4_1320 PF02574 Homocysteine S-methyltransferase AciPR4_1321 PF02609 Exonuclease VII small subunit AciPR4_1324 PF00348 Polyprenyl synthetase AciPR4_1325 PF04461 Protein of unknown function (DUF520) AciPR4_1326 PF01026 TatD related DNase AciPR4_1328 PF08264 Anticodon-binding domain of tRNA AciPR4_1328 PF09334 tRNA synthetases class I (M) AciPR4_1328 PF01588 Putative tRNA binding domain AciPR4_1330 PF17189 Glycosyl hydrolase family 30 beta sandwich domain AciPR4_1331 PF04055 Radical SAM superfamily AciPR4_1333 PF01370 NAD dependent epimerase/dehydratase family AciPR4_1334 PF00480 ROK family AciPR4_1336 PF00132 Bacterial transferase hexapeptide (six repeats) AciPR4_1336 PF14602 Hexapeptide repeat of succinyl-transferase AciPR4_1336 PF12804 MobA-like NTP transferase domain AciPR4_1338 PF02503 Polyphosphate kinase middle domain AciPR4_1338 PF13090 Polyphosphate kinase C-terminal domain 2 AciPR4_1338 PF17941 Polyphosphate kinase C-terminal domain 1 AciPR4_1338 PF13089 Polyphosphate kinase N-terminal domain AciPR4_1340 PF01040 UbiA prenyltransferase family AciPR4_1340 PF02628 Cytochrome oxidase assembly protein AciPR4_1341 PF03807 NADP oxidoreductase coenzyme F420-dependent AciPR4_1341 PF14748 Pyrroline-5-carboxylate reductase dimerisation AciPR4_1343 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AciPR4_1345 PF13580 SIS domain AciPR4_1347 PF10502 Signal peptidase, peptidase S26 AciPR4_1348 PF00121 Triosephosphate isomerase AciPR4_1349 PF00162 Phosphoglycerate kinase AciPR4_1351 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AciPR4_1351 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AciPR4_1353 PF00005 ABC transporter AciPR4_1353 PF00571 CBS domain AciPR4_1354 PF00528 Binding-protein-dependent transport system inner membrane component AciPR4_1361 PF14245 Type IV pilin PilA AciPR4_1361 PF07963 Prokaryotic N-terminal methylation motif AciPR4_1362 PF12680 SnoaL-like domain AciPR4_1362 PF08281 Sigma-70, region 4 AciPR4_1362 PF04542 Sigma-70 region 2 AciPR4_1366 PF00005 ABC transporter AciPR4_1366 PF12704 MacB-like periplasmic core domain AciPR4_1366 PF02687 FtsX-like permease family AciPR4_1367 PF00561 alpha/beta hydrolase fold AciPR4_1368 PF03965 Penicillinase repressor AciPR4_1375 PF08267 Cobalamin-independent synthase, N-terminal domain AciPR4_1375 PF01717 Cobalamin-independent synthase, Catalytic domain AciPR4_1376 PF08241 Methyltransferase domain AciPR4_1384 PF00115 Cytochrome C and Quinol oxidase polypeptide I AciPR4_1385 PF12833 Helix-turn-helix domain AciPR4_1385 PF02311 AraC-like ligand binding domain AciPR4_1386 PF00675 Insulinase (Peptidase family M16) AciPR4_1386 PF05193 Peptidase M16 inactive domain AciPR4_1387 PF13302 Acetyltransferase (GNAT) domain AciPR4_1388 PF01933 Uncharacterised protein family UPF0052 AciPR4_1391 PF00294 pfkB family carbohydrate kinase AciPR4_1391 PF01467 Cytidylyltransferase-like AciPR4_1394 PF03170 Bacterial cellulose synthase subunit AciPR4_1394 PF07238 PilZ domain AciPR4_1394 PF03552 Cellulose synthase AciPR4_1394 PF00535 Glycosyl transferase family 2 AciPR4_1395 PF01270 Glycosyl hydrolases family 8 AciPR4_1397 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AciPR4_1402 PF00750 tRNA synthetases class I (R) AciPR4_1402 PF05746 DALR anticodon binding domain AciPR4_1402 PF03485 Arginyl tRNA synthetase N terminal domain AciPR4_1403 PF00883 Cytosol aminopeptidase family, catalytic domain AciPR4_1403 PF02789 Cytosol aminopeptidase family, N-terminal domain AciPR4_1404 PF01668 SmpB protein AciPR4_1405 PF03958 Bacterial type II/III secretion system short domain AciPR4_1405 PF00263 Bacterial type II and III secretion system protein AciPR4_1406 PF07963 Prokaryotic N-terminal methylation motif AciPR4_1406 PF08334 Type II secretion system (T2SS), protein G AciPR4_1407 PF08334 Type II secretion system (T2SS), protein G AciPR4_1407 PF07963 Prokaryotic N-terminal methylation motif AciPR4_1410 PF03819 MazG nucleotide pyrophosphohydrolase domain AciPR4_1412 PF13378 Enolase C-terminal domain-like AciPR4_1412 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AciPR4_1418 PF00795 Carbon-nitrogen hydrolase AciPR4_1421 PF13380 CoA binding domain AciPR4_1423 PF02683 Cytochrome C biogenesis protein transmembrane region AciPR4_1423 PF00085 Thioredoxin AciPR4_1423 PF11412 Disulphide bond corrector protein DsbC AciPR4_1426 PF12002 MgsA AAA+ ATPase C terminal AciPR4_1426 PF16193 AAA C-terminal domain AciPR4_1426 PF00004 ATPase family associated with various cellular activities (AAA) AciPR4_1427 PF08032 RNA 2'-O ribose methyltransferase substrate binding AciPR4_1427 PF00588 SpoU rRNA Methylase family AciPR4_1432 PF04542 Sigma-70 region 2 AciPR4_1432 PF08281 Sigma-70, region 4 AciPR4_1433 PF01479 S4 domain AciPR4_1433 PF01728 FtsJ-like methyltransferase AciPR4_1434 PF01513 ATP-NAD kinase AciPR4_1436 PF00005 ABC transporter AciPR4_1436 PF02687 FtsX-like permease family AciPR4_1436 PF12704 MacB-like periplasmic core domain AciPR4_1438 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AciPR4_1439 PF00593 TonB dependent receptor AciPR4_1440 PF02838 Glycosyl hydrolase family 20, domain 2 AciPR4_1440 PF00728 Glycosyl hydrolase family 20, catalytic domain AciPR4_1440 PF07691 PA14 domain AciPR4_1441 PF08220 DeoR-like helix-turn-helix domain AciPR4_1441 PF00455 DeoR C terminal sensor domain AciPR4_1442 PF00294 pfkB family carbohydrate kinase AciPR4_1444 PF08013 Tagatose 6 phosphate kinase AciPR4_1446 PF00083 Sugar (and other) transporter AciPR4_1447 PF01641 SelR domain AciPR4_1448 PF01625 Peptide methionine sulfoxide reductase AciPR4_1450 PF12704 MacB-like periplasmic core domain AciPR4_1450 PF02687 FtsX-like permease family AciPR4_1450 PF00005 ABC transporter AciPR4_1451 PF02687 FtsX-like permease family AciPR4_1451 PF12704 MacB-like periplasmic core domain AciPR4_1451 PF00005 ABC transporter AciPR4_1454 PF03239 Iron permease FTR1 family AciPR4_1456 PF18357 Diphteria toxin repressor SH3 domain AciPR4_1456 PF02742 Iron dependent repressor, metal binding and dimerisation domain AciPR4_1456 PF01325 Iron dependent repressor, N-terminal DNA binding domain AciPR4_1458 PF00288 GHMP kinases N terminal domain AciPR4_1458 PF08544 GHMP kinases C terminal AciPR4_1458 PF10509 Galactokinase galactose-binding signature AciPR4_1459 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AciPR4_1459 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AciPR4_1460 PF06379 L-rhamnose-proton symport protein (RhaT) AciPR4_1461 PF02754 Cysteine-rich domain AciPR4_1463 PF02589 LUD domain AciPR4_1466 PF01381 Helix-turn-helix AciPR4_1467 PF01261 Xylose isomerase-like TIM barrel AciPR4_1469 PF00596 Class II Aldolase and Adducin N-terminal domain AciPR4_1470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AciPR4_1470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AciPR4_1471 PF16363 GDP-mannose 4,6 dehydratase AciPR4_1473 PF00483 Nucleotidyl transferase AciPR4_1474 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AciPR4_1477 PF01761 3-dehydroquinate synthase AciPR4_1478 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AciPR4_1478 PF00205 Thiamine pyrophosphate enzyme, central domain AciPR4_1478 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AciPR4_1480 PF00535 Glycosyl transferase family 2 AciPR4_1482 PF07859 alpha/beta hydrolase fold AciPR4_1482 PF13472 GDSL-like Lipase/Acylhydrolase family AciPR4_1483 PF02687 FtsX-like permease family AciPR4_1483 PF12704 MacB-like periplasmic core domain AciPR4_1490 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AciPR4_1490 PF01578 Cytochrome C assembly protein AciPR4_1491 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_1491 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_1491 PF08448 PAS fold AciPR4_1491 PF13188 PAS domain AciPR4_1491 PF00072 Response regulator receiver domain AciPR4_1494 PF00069 Protein kinase domain AciPR4_1494 PF03793 PASTA domain AciPR4_1496 PF04542 Sigma-70 region 2 AciPR4_1496 PF08281 Sigma-70, region 4 AciPR4_1499 PF03952 Enolase, N-terminal domain AciPR4_1499 PF00113 Enolase, C-terminal TIM barrel domain AciPR4_1500 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AciPR4_1500 PF01676 Metalloenzyme superfamily AciPR4_1502 PF02132 RecR protein AciPR4_1502 PF13662 Toprim domain AciPR4_1503 PF02575 YbaB/EbfC DNA-binding family AciPR4_1504 PF12169 DNA polymerase III subunits gamma and tau domain III AciPR4_1512 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AciPR4_1512 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AciPR4_1513 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AciPR4_1514 PF01709 Transcriptional regulator AciPR4_1516 PF02971 Formiminotransferase domain AciPR4_1516 PF07837 Formiminotransferase domain, N-terminal subdomain AciPR4_1518 PF13936 Helix-turn-helix domain AciPR4_1518 PF00665 Integrase core domain AciPR4_1520 PF04542 Sigma-70 region 2 AciPR4_1520 PF08281 Sigma-70, region 4 AciPR4_1521 PF01464 Transglycosylase SLT domain AciPR4_1521 PF01551 Peptidase family M23 AciPR4_1521 PF10145 Phage-related minor tail protein AciPR4_1522 PF12704 MacB-like periplasmic core domain AciPR4_1522 PF00005 ABC transporter AciPR4_1522 PF02687 FtsX-like permease family AciPR4_1523 PF02687 FtsX-like permease family AciPR4_1523 PF12704 MacB-like periplasmic core domain AciPR4_1532 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AciPR4_1532 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AciPR4_1533 PF02652 L-lactate permease AciPR4_1534 PF07729 FCD domain AciPR4_1534 PF00392 Bacterial regulatory proteins, gntR family AciPR4_1536 PF00486 Transcriptional regulatory protein, C terminal AciPR4_1536 PF00072 Response regulator receiver domain AciPR4_1537 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_1537 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_1537 PF00672 HAMP domain AciPR4_1541 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AciPR4_1548 PF00356 Bacterial regulatory proteins, lacI family AciPR4_1549 PF17128 Domain of unknown function (DUF5107) AciPR4_1549 PF13181 Tetratricopeptide repeat AciPR4_1550 PF00083 Sugar (and other) transporter AciPR4_1551 PF00593 TonB dependent receptor AciPR4_1552 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AciPR4_1552 PF00703 Glycosyl hydrolases family 2 AciPR4_1552 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AciPR4_1552 PF02837 Glycosyl hydrolases family 2, sugar binding domain AciPR4_1555 PF07694 5TMR of 5TMR-LYT AciPR4_1555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_1555 PF06580 Histidine kinase AciPR4_1556 PF04397 LytTr DNA-binding domain AciPR4_1556 PF00072 Response regulator receiver domain AciPR4_1557 PF03544 Gram-negative bacterial TonB protein C-terminal AciPR4_1560 PF00732 GMC oxidoreductase AciPR4_1560 PF05199 GMC oxidoreductase AciPR4_1563 PF01966 HD domain AciPR4_1565 PF07690 Major Facilitator Superfamily AciPR4_1567 PF00593 TonB dependent receptor AciPR4_1570 PF01641 SelR domain AciPR4_1571 PF02683 Cytochrome C biogenesis protein transmembrane region AciPR4_1571 PF17991 Thioredoxin like C-terminal domain AciPR4_1571 PF00578 AhpC/TSA family AciPR4_1572 PF16347 Domain of unknown function (DUF4976) AciPR4_1572 PF00884 Sulfatase AciPR4_1574 PF00884 Sulfatase AciPR4_1574 PF16385 Domain of unknown function AciPR4_1576 PF00593 TonB dependent receptor AciPR4_1576 PF00593 TonB dependent receptor AciPR4_1579 PF03069 Acetamidase/Formamidase family AciPR4_1582 PF06580 Histidine kinase AciPR4_1582 PF07694 5TMR of 5TMR-LYT AciPR4_1582 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_1583 PF04397 LytTr DNA-binding domain AciPR4_1583 PF00072 Response regulator receiver domain AciPR4_1588 PF01261 Xylose isomerase-like TIM barrel AciPR4_1590 PF07729 FCD domain AciPR4_1590 PF00392 Bacterial regulatory proteins, gntR family AciPR4_1592 PF07676 WD40-like Beta Propeller Repeat AciPR4_1592 PF04052 TolB amino-terminal domain AciPR4_1594 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AciPR4_1594 PF02142 MGS-like domain AciPR4_1594 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AciPR4_1595 PF00296 Luciferase-like monooxygenase AciPR4_1627 PF00561 alpha/beta hydrolase fold AciPR4_1628 PF00561 alpha/beta hydrolase fold AciPR4_1638 PF00107 Zinc-binding dehydrogenase AciPR4_1638 PF08240 Alcohol dehydrogenase GroES-like domain AciPR4_1639 PF00561 alpha/beta hydrolase fold AciPR4_1642 PF09261 Alpha mannosidase middle domain AciPR4_1642 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain AciPR4_1642 PF01074 Glycosyl hydrolases family 38 N-terminal domain AciPR4_1642 PF07748 Glycosyl hydrolases family 38 C-terminal domain AciPR4_1642 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 AciPR4_1643 PF00593 TonB dependent receptor AciPR4_1645 PF07971 Glycosyl hydrolase family 92 AciPR4_1645 PF17678 Glycosyl hydrolase family 92 N-terminal domain AciPR4_1646 PF01212 Beta-eliminating lyase AciPR4_1651 PF13180 PDZ domain AciPR4_1651 PF17820 PDZ domain AciPR4_1657 PF01068 ATP dependent DNA ligase domain AciPR4_1657 PF04679 ATP dependent DNA ligase C terminal region AciPR4_1657 PF13298 DNA polymerase Ligase (LigD) AciPR4_1658 PF02735 Ku70/Ku80 beta-barrel domain AciPR4_1659 PF01047 MarR family AciPR4_1662 PF00248 Aldo/keto reductase family AciPR4_1663 PF01274 Malate synthase AciPR4_1665 PF00174 Oxidoreductase molybdopterin binding domain AciPR4_1666 PF01794 Ferric reductase like transmembrane component AciPR4_1669 PF00448 SRP54-type protein, GTPase domain AciPR4_1669 PF02978 Signal peptide binding domain AciPR4_1669 PF02881 SRP54-type protein, helical bundle domain AciPR4_1671 PF01926 50S ribosome-binding GTPase AciPR4_1673 PF00072 Response regulator receiver domain AciPR4_1674 PF04264 YceI-like domain AciPR4_1675 PF07690 Major Facilitator Superfamily AciPR4_1676 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AciPR4_1676 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AciPR4_1677 PF14824 Sirohaem biosynthesis protein central AciPR4_1677 PF10414 Sirohaem synthase dimerisation region AciPR4_1677 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AciPR4_1678 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AciPR4_1681 PF00144 Beta-lactamase AciPR4_1682 PF01979 Amidohydrolase family AciPR4_1685 PF02614 Glucuronate isomerase AciPR4_1688 PF00731 AIR carboxylase AciPR4_1689 PF01042 Endoribonuclease L-PSP AciPR4_1690 PF02540 NAD synthase AciPR4_1694 PF04962 KduI/IolB family AciPR4_1695 PF00294 pfkB family carbohydrate kinase AciPR4_1696 PF01081 KDPG and KHG aldolase AciPR4_1698 PF00117 Glutamine amidotransferase class-I AciPR4_1698 PF00425 chorismate binding enzyme AciPR4_1698 PF04715 Anthranilate synthase component I, N terminal region AciPR4_1699 PF09261 Alpha mannosidase middle domain AciPR4_1699 PF07748 Glycosyl hydrolases family 38 C-terminal domain AciPR4_1699 PF01074 Glycosyl hydrolases family 38 N-terminal domain AciPR4_1700 PF17801 Alpha galactosidase C-terminal beta sandwich domain AciPR4_1700 PF16499 Alpha galactosidase A AciPR4_1701 PF00593 TonB dependent receptor AciPR4_1705 PF10282 Lactonase, 7-bladed beta-propeller AciPR4_1706 PF00497 Bacterial extracellular solute-binding proteins, family 3 AciPR4_1708 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AciPR4_1708 PF02018 Carbohydrate binding domain AciPR4_1709 PF00596 Class II Aldolase and Adducin N-terminal domain AciPR4_1710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AciPR4_1710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AciPR4_1712 PF01301 Glycosyl hydrolases family 35 AciPR4_1714 PF00295 Glycosyl hydrolases family 28 AciPR4_1715 PF07470 Glycosyl Hydrolase Family 88 AciPR4_1716 PF00657 GDSL-like Lipase/Acylhydrolase AciPR4_1718 PF13472 GDSL-like Lipase/Acylhydrolase family AciPR4_1719 PF00128 Alpha amylase, catalytic domain AciPR4_1719 PF09154 Domain of unknown function (DUF1939) AciPR4_1729 PF13533 Biotin-lipoyl like AciPR4_1734 PF00034 Cytochrome c AciPR4_1734 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AciPR4_1734 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AciPR4_1735 PF00115 Cytochrome C and Quinol oxidase polypeptide I AciPR4_1736 PF00510 Cytochrome c oxidase subunit III AciPR4_1740 PF00033 Cytochrome b/b6/petB AciPR4_1740 PF00032 Cytochrome b(C-terminal)/b6/petD AciPR4_1740 PF02167 Cytochrome C1 family AciPR4_1743 PF07730 Histidine kinase AciPR4_1743 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_1743 PF13492 GAF domain AciPR4_1744 PF00196 Bacterial regulatory proteins, luxR family AciPR4_1744 PF00072 Response regulator receiver domain AciPR4_1747 PF01734 Patatin-like phospholipase AciPR4_1748 PF00342 Phosphoglucose isomerase AciPR4_1749 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AciPR4_1749 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AciPR4_1753 PF08331 Domain of unknown function (DUF1730) AciPR4_1754 PF03631 Virulence factor BrkB AciPR4_1755 PF00672 HAMP domain AciPR4_1755 PF07228 Stage II sporulation protein E (SpoIIE) AciPR4_1758 PF01578 Cytochrome C assembly protein AciPR4_1760 PF04073 Aminoacyl-tRNA editing domain AciPR4_1761 PF12857 TOBE-like domain AciPR4_1761 PF00005 ABC transporter AciPR4_1764 PF01964 Radical SAM ThiC family AciPR4_1766 PF01741 Large-conductance mechanosensitive channel, MscL AciPR4_1768 PF01008 Initiation factor 2 subunit family AciPR4_1771 PF00156 Phosphoribosyl transferase domain AciPR4_1772 PF02517 CPBP intramembrane metalloprotease AciPR4_1773 PF17760 UvrA interaction domain AciPR4_1773 PF00005 ABC transporter AciPR4_1773 PF17755 UvrA DNA-binding domain AciPR4_1777 PF00881 Nitroreductase family AciPR4_1778 PF00561 alpha/beta hydrolase fold AciPR4_1779 PF02441 Flavoprotein AciPR4_1782 PF10397 Adenylosuccinate lyase C-terminus AciPR4_1782 PF00206 Lyase AciPR4_1786 PF14437 MafB19-like deaminase AciPR4_1790 PF04371 Porphyromonas-type peptidyl-arginine deiminase AciPR4_1793 PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) AciPR4_1794 PF00120 Glutamine synthetase, catalytic domain AciPR4_1794 PF03951 Glutamine synthetase, beta-Grasp domain AciPR4_1799 PF17757 UvrB interaction domain AciPR4_1799 PF00271 Helicase conserved C-terminal domain AciPR4_1799 PF02151 UvrB/uvrC motif AciPR4_1799 PF04851 Type III restriction enzyme, res subunit AciPR4_1799 PF12344 Ultra-violet resistance protein B AciPR4_1800 PF04235 Protein of unknown function (DUF418) AciPR4_1801 PF07690 Major Facilitator Superfamily AciPR4_1802 PF13419 Haloacid dehalogenase-like hydrolase AciPR4_1804 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AciPR4_1805 PF01726 LexA DNA binding domain AciPR4_1805 PF00717 Peptidase S24-like AciPR4_1806 PF00486 Transcriptional regulatory protein, C terminal AciPR4_1806 PF00072 Response regulator receiver domain AciPR4_1808 PF02954 Bacterial regulatory protein, Fis family AciPR4_1808 PF00158 Sigma-54 interaction domain AciPR4_1808 PF00072 Response regulator receiver domain AciPR4_1809 PF00460 Flagella basal body rod protein AciPR4_1810 PF00460 Flagella basal body rod protein AciPR4_1810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AciPR4_1811 PF02049 Flagellar hook-basal body complex protein FliE AciPR4_1812 PF01514 Secretory protein of YscJ/FliF family AciPR4_1812 PF08345 Flagellar M-ring protein C-terminal AciPR4_1813 PF14842 FliG N-terminal domain AciPR4_1813 PF01706 FliG C-terminal domain AciPR4_1813 PF14841 FliG middle domain AciPR4_1815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AciPR4_1815 PF18269 T3SS EscN ATPase C-terminal domain AciPR4_1818 PF13861 FlgD Tudor-like domain AciPR4_1818 PF13860 FlgD Ig-like domain AciPR4_1818 PF03963 Flagellar hook capping protein - N-terminal region AciPR4_1819 PF00460 Flagella basal body rod protein AciPR4_1819 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AciPR4_1819 PF07559 Flagellar basal body protein FlaE AciPR4_1823 PF00813 FliP family AciPR4_1824 PF01313 Bacterial export proteins, family 3 AciPR4_1825 PF01311 Bacterial export proteins, family 1 AciPR4_1826 PF01312 FlhB HrpN YscU SpaS Family AciPR4_1827 PF00771 FHIPEP family AciPR4_1828 PF04545 Sigma-70, region 4 AciPR4_1828 PF04539 Sigma-70 region 3 AciPR4_1828 PF04542 Sigma-70 region 2 AciPR4_1830 PF04509 CheC-like family AciPR4_1830 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AciPR4_1831 PF00460 Flagella basal body rod protein AciPR4_1831 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AciPR4_1832 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AciPR4_1832 PF00460 Flagella basal body rod protein AciPR4_1834 PF02107 Flagellar L-ring protein AciPR4_1835 PF02119 Flagellar P-ring protein AciPR4_1839 PF00460 Flagella basal body rod protein AciPR4_1839 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AciPR4_1844 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AciPR4_1846 PF00312 Ribosomal protein S15 AciPR4_1847 PF03725 3' exoribonuclease family, domain 2 AciPR4_1847 PF01138 3' exoribonuclease family, domain 1 AciPR4_1847 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AciPR4_1847 PF00013 KH domain AciPR4_1847 PF00575 S1 RNA binding domain AciPR4_1849 PF01757 Acyltransferase family AciPR4_1851 PF08338 Domain of unknown function (DUF1731) AciPR4_1851 PF01370 NAD dependent epimerase/dehydratase family AciPR4_1852 PF00005 ABC transporter AciPR4_1852 PF09383 NIL domain AciPR4_1853 PF02405 Permease MlaE AciPR4_1854 PF08240 Alcohol dehydrogenase GroES-like domain AciPR4_1854 PF00107 Zinc-binding dehydrogenase AciPR4_1857 PF01593 Flavin containing amine oxidoreductase AciPR4_1865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AciPR4_1866 PF02272 DHHA1 domain AciPR4_1866 PF01368 DHH family AciPR4_1866 PF17768 RecJ OB domain AciPR4_1871 PF01370 NAD dependent epimerase/dehydratase family AciPR4_1873 PF16363 GDP-mannose 4,6 dehydratase AciPR4_1874 PF09594 Glycosyltransferase family 87 AciPR4_1875 PF04055 Radical SAM superfamily AciPR4_1875 PF00919 Uncharacterized protein family UPF0004 AciPR4_1875 PF01938 TRAM domain AciPR4_1877 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AciPR4_1878 PF13185 GAF domain AciPR4_1879 PF01791 DeoC/LacD family aldolase AciPR4_1883 PF01790 Prolipoprotein diacylglyceryl transferase AciPR4_1888 PF17755 UvrA DNA-binding domain AciPR4_1888 PF17760 UvrA interaction domain AciPR4_1888 PF00005 ABC transporter AciPR4_1889 PF01252 Signal peptidase (SPase) II AciPR4_1890 PF06827 Zinc finger found in FPG and IleRS AciPR4_1890 PF08264 Anticodon-binding domain of tRNA AciPR4_1890 PF00133 tRNA synthetases class I (I, L, M and V) AciPR4_1894 PF01300 Telomere recombination AciPR4_1894 PF03481 Putative GTP-binding controlling metal-binding AciPR4_1895 PF09115 DNA polymerase III, delta subunit, C terminal AciPR4_1898 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AciPR4_1900 PF07690 Major Facilitator Superfamily AciPR4_1902 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AciPR4_1902 PF00529 HlyD membrane-fusion protein of T1SS AciPR4_1905 PF13419 Haloacid dehalogenase-like hydrolase AciPR4_1906 PF00155 Aminotransferase class I and II AciPR4_1907 PF00753 Metallo-beta-lactamase superfamily AciPR4_1908 PF03840 Preprotein translocase SecG subunit AciPR4_1914 PF02463 RecF/RecN/SMC N terminal domain AciPR4_1916 PF01381 Helix-turn-helix AciPR4_1919 PF02223 Thymidylate kinase AciPR4_1923 PF02687 FtsX-like permease family AciPR4_1923 PF00005 ABC transporter AciPR4_1923 PF12704 MacB-like periplasmic core domain AciPR4_1927 PF03352 Methyladenine glycosylase AciPR4_1934 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AciPR4_1934 PF00132 Bacterial transferase hexapeptide (six repeats) AciPR4_1936 PF01743 Poly A polymerase head domain AciPR4_1936 PF12627 Probable RNA and SrmB- binding site of polymerase A AciPR4_1936 PF01966 HD domain AciPR4_1938 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AciPR4_1938 PF14579 Helix-hairpin-helix motif AciPR4_1938 PF02811 PHP domain AciPR4_1938 PF07733 Bacterial DNA polymerase III alpha NTPase domain AciPR4_1939 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AciPR4_1944 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AciPR4_1945 PF05036 Sporulation related domain AciPR4_1945 PF03330 Lytic transglycolase AciPR4_1946 PF08543 Phosphomethylpyrimidine kinase AciPR4_1947 PF02597 ThiS family AciPR4_1947 PF05690 Thiazole biosynthesis protein ThiG AciPR4_1949 PF13439 Glycosyltransferase Family 4 AciPR4_1949 PF00534 Glycosyl transferases group 1 AciPR4_1950 PF13439 Glycosyltransferase Family 4 AciPR4_1950 PF00534 Glycosyl transferases group 1 AciPR4_1952 PF02397 Bacterial sugar transferase AciPR4_1965 PF13439 Glycosyltransferase Family 4 AciPR4_1965 PF00534 Glycosyl transferases group 1 AciPR4_1967 PF00534 Glycosyl transferases group 1 AciPR4_1967 PF13579 Glycosyl transferase 4-like domain AciPR4_1968 PF00925 GTP cyclohydrolase II AciPR4_1968 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AciPR4_1970 PF00111 2Fe-2S iron-sulfur cluster binding domain AciPR4_1970 PF01799 [2Fe-2S] binding domain AciPR4_1971 PF00941 FAD binding domain in molybdopterin dehydrogenase AciPR4_1971 PF03450 CO dehydrogenase flavoprotein C-terminal domain AciPR4_1972 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AciPR4_1972 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AciPR4_1973 PF00270 DEAD/DEAH box helicase AciPR4_1973 PF00271 Helicase conserved C-terminal domain AciPR4_1973 PF00570 HRDC domain AciPR4_1973 PF16124 RecQ zinc-binding AciPR4_1973 PF09382 RQC domain AciPR4_1974 PF01680 SOR/SNZ family AciPR4_1975 PF01174 SNO glutamine amidotransferase family AciPR4_1976 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AciPR4_1976 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AciPR4_1977 PF00115 Cytochrome C and Quinol oxidase polypeptide I AciPR4_1980 PF01546 Peptidase family M20/M25/M40 AciPR4_1980 PF07687 Peptidase dimerisation domain AciPR4_1982 PF00202 Aminotransferase class-III AciPR4_1983 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_1983 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_1984 PF00072 Response regulator receiver domain AciPR4_1984 PF00158 Sigma-54 interaction domain AciPR4_1984 PF02954 Bacterial regulatory protein, Fis family AciPR4_1985 PF00107 Zinc-binding dehydrogenase AciPR4_1985 PF08240 Alcohol dehydrogenase GroES-like domain AciPR4_1988 PF01370 NAD dependent epimerase/dehydratase family AciPR4_1992 PF04055 Radical SAM superfamily AciPR4_1992 PF06463 Molybdenum Cofactor Synthesis C AciPR4_1994 PF13243 Squalene-hopene cyclase C-terminal domain AciPR4_1994 PF13249 Squalene-hopene cyclase N-terminal domain AciPR4_1995 PF02401 LytB protein AciPR4_1996 PF02463 RecF/RecN/SMC N terminal domain AciPR4_1997 PF01618 MotA/TolQ/ExbB proton channel family AciPR4_1998 PF02472 Biopolymer transport protein ExbD/TolR AciPR4_2001 PF00691 OmpA family AciPR4_2002 PF13525 Outer membrane lipoprotein AciPR4_2004 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AciPR4_2004 PF02142 MGS-like domain AciPR4_2004 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AciPR4_2005 PF00117 Glutamine amidotransferase class-I AciPR4_2005 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AciPR4_2008 PF07681 DoxX AciPR4_2010 PF02780 Transketolase, C-terminal domain AciPR4_2010 PF02779 Transketolase, pyrimidine binding domain AciPR4_2013 PF00924 Mechanosensitive ion channel AciPR4_2014 PF03190 Protein of unknown function, DUF255 AciPR4_2016 PF01416 tRNA pseudouridine synthase AciPR4_2019 PF13180 PDZ domain AciPR4_2025 PF02621 Menaquinone biosynthesis AciPR4_2026 PF01554 MatE AciPR4_2027 PF01638 HxlR-like helix-turn-helix AciPR4_2031 PF00593 TonB dependent receptor AciPR4_2033 PF01494 FAD binding domain AciPR4_2035 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AciPR4_2035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AciPR4_2036 PF13520 Amino acid permease AciPR4_2037 PF13520 Amino acid permease AciPR4_2038 PF02581 Thiamine monophosphate synthase AciPR4_2040 PF03060 Nitronate monooxygenase AciPR4_2041 PF04235 Protein of unknown function (DUF418) AciPR4_2043 PF02785 Biotin carboxylase C-terminal domain AciPR4_2043 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AciPR4_2043 PF00289 Biotin carboxylase, N-terminal domain AciPR4_2044 PF00364 Biotin-requiring enzyme AciPR4_2045 PF00557 Metallopeptidase family M24 AciPR4_2045 PF01321 Creatinase/Prolidase N-terminal domain AciPR4_2046 PF10518 TAT (twin-arginine translocation) pathway signal sequence AciPR4_2046 PF00149 Calcineurin-like phosphoesterase AciPR4_2048 PF00501 AMP-binding enzyme AciPR4_2049 PF00665 Integrase core domain AciPR4_2049 PF13936 Helix-turn-helix domain AciPR4_2050 PF01493 GXGXG motif AciPR4_2050 PF01645 Conserved region in glutamate synthase AciPR4_2050 PF04898 Glutamate synthase central domain AciPR4_2050 PF00310 Glutamine amidotransferases class-II AciPR4_2051 PF01316 Arginine repressor, DNA binding domain AciPR4_2051 PF02863 Arginine repressor, C-terminal domain AciPR4_2052 PF02774 Semialdehyde dehydrogenase, dimerisation domain AciPR4_2052 PF01118 Semialdehyde dehydrogenase, NAD binding domain AciPR4_2053 PF00696 Amino acid kinase family AciPR4_2054 PF00202 Aminotransferase class-III AciPR4_2055 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AciPR4_2055 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AciPR4_2056 PF00764 Arginosuccinate synthase AciPR4_2057 PF00206 Lyase AciPR4_2057 PF14698 Argininosuccinate lyase C-terminal AciPR4_2058 PF14698 Argininosuccinate lyase C-terminal AciPR4_2058 PF00583 Acetyltransferase (GNAT) family AciPR4_2058 PF00206 Lyase AciPR4_2060 PF00005 ABC transporter AciPR4_2061 PF13419 Haloacid dehalogenase-like hydrolase AciPR4_2062 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AciPR4_2062 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AciPR4_2064 PF00593 TonB dependent receptor AciPR4_2066 PF00268 Ribonucleotide reductase, small chain AciPR4_2067 PF00317 Ribonucleotide reductase, all-alpha domain AciPR4_2067 PF03477 ATP cone domain AciPR4_2067 PF02867 Ribonucleotide reductase, barrel domain AciPR4_2068 PF00205 Thiamine pyrophosphate enzyme, central domain AciPR4_2068 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AciPR4_2068 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AciPR4_2069 PF13580 SIS domain AciPR4_2070 PF00483 Nucleotidyl transferase AciPR4_2071 PF16363 GDP-mannose 4,6 dehydratase AciPR4_2072 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AciPR4_2075 PF09335 SNARE associated Golgi protein AciPR4_2076 PF00128 Alpha amylase, catalytic domain AciPR4_2076 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AciPR4_2077 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AciPR4_2078 PF16921 Tex protein YqgF-like domain AciPR4_2078 PF09371 Tex-like protein N-terminal domain AciPR4_2078 PF00575 S1 RNA binding domain AciPR4_2078 PF17674 HHH domain AciPR4_2080 PF08281 Sigma-70, region 4 AciPR4_2080 PF04542 Sigma-70 region 2 AciPR4_2082 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_2082 PF08446 PAS fold AciPR4_2082 PF00360 Phytochrome region AciPR4_2082 PF01590 GAF domain AciPR4_2082 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2083 PF00072 Response regulator receiver domain AciPR4_2084 PF00563 EAL domain AciPR4_2084 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_2084 PF03707 Bacterial signalling protein N terminal repeat AciPR4_2086 PF00563 EAL domain AciPR4_2086 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_2086 PF08447 PAS fold AciPR4_2086 PF08448 PAS fold AciPR4_2088 PF02652 L-lactate permease AciPR4_2089 PF02965 Vitamin B12 dependent methionine synthase, activation domain AciPR4_2089 PF00809 Pterin binding enzyme AciPR4_2089 PF02574 Homocysteine S-methyltransferase AciPR4_2089 PF02607 B12 binding domain AciPR4_2089 PF02310 B12 binding domain AciPR4_2090 PF02574 Homocysteine S-methyltransferase AciPR4_2090 PF00809 Pterin binding enzyme AciPR4_2090 PF02965 Vitamin B12 dependent methionine synthase, activation domain AciPR4_2090 PF02607 B12 binding domain AciPR4_2090 PF02310 B12 binding domain AciPR4_2091 PF00196 Bacterial regulatory proteins, luxR family AciPR4_2091 PF00072 Response regulator receiver domain AciPR4_2093 PF07730 Histidine kinase AciPR4_2093 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2093 PF13185 GAF domain AciPR4_2093 PF13492 GAF domain AciPR4_2096 PF12706 Beta-lactamase superfamily domain AciPR4_2097 PF03070 TENA/THI-4/PQQC family AciPR4_2097 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AciPR4_2099 PF13186 Iron-sulfur cluster-binding domain AciPR4_2099 PF04055 Radical SAM superfamily AciPR4_2101 PF00128 Alpha amylase, catalytic domain AciPR4_2101 PF02903 Alpha amylase, N-terminal ig-like domain AciPR4_2104 PF00672 HAMP domain AciPR4_2104 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_2104 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2105 PF00486 Transcriptional regulatory protein, C terminal AciPR4_2105 PF00072 Response regulator receiver domain AciPR4_2108 PF06100 MCRA family AciPR4_2110 PF00109 Beta-ketoacyl synthase, N-terminal domain AciPR4_2110 PF02801 Beta-ketoacyl synthase, C-terminal domain AciPR4_2111 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AciPR4_2111 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AciPR4_2113 PF00593 TonB dependent receptor AciPR4_2117 PF00005 ABC transporter AciPR4_2120 PF01037 Lrp/AsnC ligand binding domain AciPR4_2121 PF01557 Fumarylacetoacetate (FAA) hydrolase family AciPR4_2122 PF13378 Enolase C-terminal domain-like AciPR4_2122 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AciPR4_2123 PF01380 SIS domain AciPR4_2126 PF00155 Aminotransferase class I and II AciPR4_2128 PF00873 AcrB/AcrD/AcrF family AciPR4_2131 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2131 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_2132 PF02954 Bacterial regulatory protein, Fis family AciPR4_2132 PF00158 Sigma-54 interaction domain AciPR4_2132 PF00072 Response regulator receiver domain AciPR4_2133 PF00300 Histidine phosphatase superfamily (branch 1) AciPR4_2138 PF00183 Hsp90 protein AciPR4_2139 PF08482 ATP-dependent helicase C-terminal AciPR4_2139 PF00271 Helicase conserved C-terminal domain AciPR4_2139 PF04408 Helicase associated domain (HA2) AciPR4_2139 PF00270 DEAD/DEAH box helicase AciPR4_2144 PF00756 Putative esterase AciPR4_2145 PF00886 Ribosomal protein S16 AciPR4_2147 PF05239 PRC-barrel domain AciPR4_2147 PF01782 RimM N-terminal domain AciPR4_2149 PF01746 tRNA (Guanine-1)-methyltransferase AciPR4_2150 PF00107 Zinc-binding dehydrogenase AciPR4_2150 PF08240 Alcohol dehydrogenase GroES-like domain AciPR4_2151 PF01245 Ribosomal protein L19 AciPR4_2153 PF01351 Ribonuclease HII AciPR4_2156 PF09339 IclR helix-turn-helix domain AciPR4_2156 PF01614 Bacterial transcriptional regulator AciPR4_2158 PF03062 MBOAT, membrane-bound O-acyltransferase family AciPR4_2159 PF01238 Phosphomannose isomerase type I AciPR4_2161 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_2161 PF00672 HAMP domain AciPR4_2161 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2162 PF00486 Transcriptional regulatory protein, C terminal AciPR4_2162 PF00072 Response regulator receiver domain AciPR4_2163 PF03739 Lipopolysaccharide export system permease LptF/LptG AciPR4_2164 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AciPR4_2164 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AciPR4_2165 PF00664 ABC transporter transmembrane region AciPR4_2165 PF00005 ABC transporter AciPR4_2167 PF00529 HlyD membrane-fusion protein of T1SS AciPR4_2167 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AciPR4_2169 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AciPR4_2169 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AciPR4_2170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AciPR4_2170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AciPR4_2171 PF01960 ArgJ family AciPR4_2172 PF00456 Transketolase, thiamine diphosphate binding domain AciPR4_2172 PF17831 Pyruvate dehydrogenase E1 component middle domain AciPR4_2175 PF16363 GDP-mannose 4,6 dehydratase AciPR4_2176 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AciPR4_2176 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AciPR4_2176 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AciPR4_2177 PF00534 Glycosyl transferases group 1 AciPR4_2177 PF13439 Glycosyltransferase Family 4 AciPR4_2179 PF00072 Response regulator receiver domain AciPR4_2179 PF00486 Transcriptional regulatory protein, C terminal AciPR4_2180 PF00005 ABC transporter AciPR4_2183 PF02806 Alpha amylase, C-terminal all-beta domain AciPR4_2183 PF00128 Alpha amylase, catalytic domain AciPR4_2184 PF00563 EAL domain AciPR4_2184 PF01590 GAF domain AciPR4_2184 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_2184 PF00360 Phytochrome region AciPR4_2186 PF12704 MacB-like periplasmic core domain AciPR4_2186 PF00005 ABC transporter AciPR4_2186 PF02687 FtsX-like permease family AciPR4_2187 PF02687 FtsX-like permease family AciPR4_2187 PF12704 MacB-like periplasmic core domain AciPR4_2187 PF00005 ABC transporter AciPR4_2194 PF00166 Chaperonin 10 Kd subunit AciPR4_2195 PF00118 TCP-1/cpn60 chaperonin family AciPR4_2203 PF01212 Beta-eliminating lyase AciPR4_2204 PF04055 Radical SAM superfamily AciPR4_2205 PF00664 ABC transporter transmembrane region AciPR4_2205 PF00005 ABC transporter AciPR4_2206 PF01865 Protein of unknown function DUF47 AciPR4_2207 PF01384 Phosphate transporter family AciPR4_2208 PF02684 Lipid-A-disaccharide synthetase AciPR4_2210 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AciPR4_2210 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AciPR4_2212 PF02446 4-alpha-glucanotransferase AciPR4_2214 PF05698 Bacterial trigger factor protein (TF) C-terminus AciPR4_2218 PF07715 TonB-dependent Receptor Plug Domain AciPR4_2218 PF00593 TonB dependent receptor AciPR4_2220 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AciPR4_2220 PF12708 Pectate lyase superfamily protein AciPR4_2220 PF13229 Right handed beta helix region AciPR4_2221 PF00486 Transcriptional regulatory protein, C terminal AciPR4_2221 PF00072 Response regulator receiver domain AciPR4_2222 PF18698 Histidine kinase sensor domain AciPR4_2222 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2222 PF00672 HAMP domain AciPR4_2222 PF00989 PAS fold AciPR4_2222 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_2223 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_2223 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2223 PF00672 HAMP domain AciPR4_2224 PF00072 Response regulator receiver domain AciPR4_2224 PF00486 Transcriptional regulatory protein, C terminal AciPR4_2227 PF00593 TonB dependent receptor AciPR4_2230 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase AciPR4_2234 PF12833 Helix-turn-helix domain AciPR4_2240 PF08281 Sigma-70, region 4 AciPR4_2240 PF04542 Sigma-70 region 2 AciPR4_2245 PF05114 Protein of unknown function (DUF692) AciPR4_2249 PF00593 TonB dependent receptor AciPR4_2252 PF07676 WD40-like Beta Propeller Repeat AciPR4_2252 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AciPR4_2252 PF00326 Prolyl oligopeptidase family AciPR4_2255 PF00294 pfkB family carbohydrate kinase AciPR4_2258 PF03781 Sulfatase-modifying factor enzyme 1 AciPR4_2259 PF00356 Bacterial regulatory proteins, lacI family AciPR4_2261 PF12704 MacB-like periplasmic core domain AciPR4_2261 PF02687 FtsX-like permease family AciPR4_2261 PF00005 ABC transporter AciPR4_2264 PF00486 Transcriptional regulatory protein, C terminal AciPR4_2264 PF00072 Response regulator receiver domain AciPR4_2265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2265 PF07689 KaiB domain AciPR4_2268 PF02903 Alpha amylase, N-terminal ig-like domain AciPR4_2268 PF00128 Alpha amylase, catalytic domain AciPR4_2270 PF00291 Pyridoxal-phosphate dependent enzyme AciPR4_2273 PF12833 Helix-turn-helix domain AciPR4_2273 PF02311 AraC-like ligand binding domain AciPR4_2275 PF12146 Serine aminopeptidase, S33 AciPR4_2286 PF16859 Tetracyclin repressor-like, C-terminal domain AciPR4_2286 PF00440 Bacterial regulatory proteins, tetR family AciPR4_2287 PF00873 AcrB/AcrD/AcrF family AciPR4_2288 PF13533 Biotin-lipoyl like AciPR4_2289 PF02321 Outer membrane efflux protein AciPR4_2291 PF00440 Bacterial regulatory proteins, tetR family AciPR4_2291 PF08362 YcdC-like protein, C-terminal region AciPR4_2295 PF12852 Cupin AciPR4_2295 PF12833 Helix-turn-helix domain AciPR4_2299 PF08244 Glycosyl hydrolases family 32 C terminal AciPR4_2299 PF00251 Glycosyl hydrolases family 32 N-terminal domain AciPR4_2300 PF00294 pfkB family carbohydrate kinase AciPR4_2302 PF07859 alpha/beta hydrolase fold AciPR4_2305 PF01261 Xylose isomerase-like TIM barrel AciPR4_2307 PF00593 TonB dependent receptor AciPR4_2308 PF00356 Bacterial regulatory proteins, lacI family AciPR4_2313 PF00264 Common central domain of tyrosinase AciPR4_2317 PF07732 Multicopper oxidase AciPR4_2317 PF07731 Multicopper oxidase AciPR4_2317 PF07732 Multicopper oxidase AciPR4_2317 PF07731 Multicopper oxidase AciPR4_2318 PF08241 Methyltransferase domain AciPR4_2319 PF00696 Amino acid kinase family AciPR4_2320 PF00696 Amino acid kinase family AciPR4_2322 PF00111 2Fe-2S iron-sulfur cluster binding domain AciPR4_2322 PF01799 [2Fe-2S] binding domain AciPR4_2323 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AciPR4_2338 PF00082 Subtilase family AciPR4_2338 PF09286 Pro-kumamolisin, activation domain AciPR4_2344 PF01381 Helix-turn-helix AciPR4_2345 PF13657 HipA N-terminal domain AciPR4_2345 PF07804 HipA-like C-terminal domain AciPR4_2349 PF00578 AhpC/TSA family AciPR4_2350 PF07690 Major Facilitator Superfamily AciPR4_2351 PF07992 Pyridine nucleotide-disulphide oxidoreductase AciPR4_2358 PF03466 LysR substrate binding domain AciPR4_2358 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AciPR4_2359 PF14659 Phage integrase, N-terminal SAM-like domain AciPR4_2359 PF00589 Phage integrase family AciPR4_2364 PF08240 Alcohol dehydrogenase GroES-like domain AciPR4_2364 PF00107 Zinc-binding dehydrogenase AciPR4_2365 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AciPR4_2365 PF01872 RibD C-terminal domain AciPR4_2366 PF06719 AraC-type transcriptional regulator N-terminus AciPR4_2366 PF12833 Helix-turn-helix domain AciPR4_2367 PF02321 Outer membrane efflux protein AciPR4_2368 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AciPR4_2369 PF00873 AcrB/AcrD/AcrF family AciPR4_2370 PF00248 Aldo/keto reductase family AciPR4_2372 PF00107 Zinc-binding dehydrogenase AciPR4_2372 PF08240 Alcohol dehydrogenase GroES-like domain AciPR4_2375 PF12833 Helix-turn-helix domain AciPR4_2375 PF06719 AraC-type transcriptional regulator N-terminus AciPR4_2376 PF17762 HTH domain found in ParB protein AciPR4_2376 PF02195 ParB-like nuclease domain AciPR4_2386 PF18272 single-stranded DNA binding TraI N-terminal subdomain AciPR4_2386 PF07057 DNA helicase TraI AciPR4_2386 PF18340 DNA relaxase TraI 2B/2B-like domain AciPR4_2386 PF08751 TrwC relaxase AciPR4_2391 PF00436 Single-strand binding protein family AciPR4_2392 PF00437 Type II/IV secretion system protein AciPR4_2394 PF13744 Helix-turn-helix domain AciPR4_2407 PF03466 LysR substrate binding domain AciPR4_2407 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AciPR4_2409 PF02899 Phage integrase, N-terminal SAM-like domain AciPR4_2409 PF00589 Phage integrase family AciPR4_2411 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2411 PF16527 Two-component sensor protein CpxA, periplasmic domain AciPR4_2411 PF00672 HAMP domain AciPR4_2411 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_2412 PF00072 Response regulator receiver domain AciPR4_2412 PF00486 Transcriptional regulatory protein, C terminal AciPR4_2416 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AciPR4_2417 PF00356 Bacterial regulatory proteins, lacI family AciPR4_2418 PF01590 GAF domain AciPR4_2418 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_2418 PF00360 Phytochrome region AciPR4_2418 PF00563 EAL domain AciPR4_2420 PF00331 Glycosyl hydrolase family 10 AciPR4_2420 PF07859 alpha/beta hydrolase fold AciPR4_2423 PF17137 Domain of unknown function (DUF5110) AciPR4_2423 PF16338 Domain of unknown function (DUF4968) AciPR4_2423 PF01055 Glycosyl hydrolases family 31 AciPR4_2428 PF00202 Aminotransferase class-III AciPR4_2433 PF00535 Glycosyl transferase family 2 AciPR4_2434 PF13439 Glycosyltransferase Family 4 AciPR4_2438 PF01757 Acyltransferase family AciPR4_2440 PF02563 Polysaccharide biosynthesis/export protein AciPR4_2441 PF13807 G-rich domain on putative tyrosine kinase AciPR4_2441 PF13614 AAA domain AciPR4_2441 PF02706 Chain length determinant protein AciPR4_2442 PF13439 Glycosyltransferase Family 4 AciPR4_2442 PF00534 Glycosyl transferases group 1 AciPR4_2443 PF13439 Glycosyltransferase Family 4 AciPR4_2443 PF00534 Glycosyl transferases group 1 AciPR4_2445 PF08031 Berberine and berberine like AciPR4_2445 PF01565 FAD binding domain AciPR4_2446 PF01053 Cys/Met metabolism PLP-dependent enzyme AciPR4_2447 PF04794 YdjC-like protein AciPR4_2448 PF06580 Histidine kinase AciPR4_2448 PF07694 5TMR of 5TMR-LYT AciPR4_2449 PF00925 GTP cyclohydrolase II AciPR4_2451 PF00691 OmpA family AciPR4_2452 PF08459 UvrC Helix-hairpin-helix N-terminal AciPR4_2452 PF01541 GIY-YIG catalytic domain AciPR4_2452 PF02151 UvrB/uvrC motif AciPR4_2455 PF07715 TonB-dependent Receptor Plug Domain AciPR4_2455 PF00593 TonB dependent receptor AciPR4_2456 PF04228 Putative neutral zinc metallopeptidase AciPR4_2457 PF07971 Glycosyl hydrolase family 92 AciPR4_2457 PF17678 Glycosyl hydrolase family 92 N-terminal domain AciPR4_2461 PF00593 TonB dependent receptor AciPR4_2464 PF13520 Amino acid permease AciPR4_2465 PF08323 Starch synthase catalytic domain AciPR4_2465 PF00534 Glycosyl transferases group 1 AciPR4_2466 PF00398 Ribosomal RNA adenine dimethylase AciPR4_2469 PF02075 Crossover junction endodeoxyribonuclease RuvC AciPR4_2470 PF05690 Thiazole biosynthesis protein ThiG AciPR4_2474 PF01478 Type IV leader peptidase family AciPR4_2474 PF06750 Bacterial Peptidase A24 N-terminal domain AciPR4_2476 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AciPR4_2477 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AciPR4_2478 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AciPR4_2478 PF00374 Nickel-dependent hydrogenase AciPR4_2481 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AciPR4_2481 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AciPR4_2481 PF10531 SLBB domain AciPR4_2482 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AciPR4_2482 PF00384 Molybdopterin oxidoreductase AciPR4_2482 PF01568 Molydopterin dinucleotide binding domain AciPR4_2482 PF12838 4Fe-4S dicluster domain AciPR4_2482 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AciPR4_2483 PF00146 NADH dehydrogenase AciPR4_2484 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AciPR4_2485 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AciPR4_2486 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AciPR4_2486 PF00361 Proton-conducting membrane transporter AciPR4_2487 PF00361 Proton-conducting membrane transporter AciPR4_2487 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AciPR4_2488 PF00361 Proton-conducting membrane transporter AciPR4_2489 PF00137 ATP synthase subunit C AciPR4_2490 PF00119 ATP synthase A chain AciPR4_2494 PF00152 tRNA synthetases class II (D, K and N) AciPR4_2494 PF01336 OB-fold nucleic acid binding domain AciPR4_2495 PF13277 YmdB-like protein AciPR4_2497 PF02463 RecF/RecN/SMC N terminal domain AciPR4_2497 PF06470 SMC proteins Flexible Hinge Domain AciPR4_2498 PF01259 SAICAR synthetase AciPR4_2500 PF00158 Sigma-54 interaction domain AciPR4_2500 PF00072 Response regulator receiver domain AciPR4_2500 PF02954 Bacterial regulatory protein, Fis family AciPR4_2504 PF01380 SIS domain AciPR4_2505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AciPR4_2507 PF00455 DeoR C terminal sensor domain AciPR4_2507 PF08220 DeoR-like helix-turn-helix domain AciPR4_2508 PF00593 TonB dependent receptor AciPR4_2518 PF00561 alpha/beta hydrolase fold AciPR4_2519 PF01865 Protein of unknown function DUF47 AciPR4_2520 PF01384 Phosphate transporter family AciPR4_2522 PF04299 Putative FMN-binding domain AciPR4_2523 PF00575 S1 RNA binding domain AciPR4_2524 PF08240 Alcohol dehydrogenase GroES-like domain AciPR4_2524 PF00107 Zinc-binding dehydrogenase AciPR4_2525 PF00440 Bacterial regulatory proteins, tetR family AciPR4_2525 PF02909 Tetracyclin repressor-like, C-terminal domain AciPR4_2527 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AciPR4_2529 PF17990 L-Lysine epsilon oxidase N-terminal AciPR4_2529 PF18417 L-lysine epsilon oxidase C-terminal domain AciPR4_2532 PF07731 Multicopper oxidase AciPR4_2532 PF07732 Multicopper oxidase AciPR4_2533 PF01757 Acyltransferase family AciPR4_2535 PF02632 BioY family AciPR4_2539 PF00005 ABC transporter AciPR4_2539 PF02687 FtsX-like permease family AciPR4_2539 PF12704 MacB-like periplasmic core domain AciPR4_2540 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_2540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2541 PF00072 Response regulator receiver domain AciPR4_2541 PF00158 Sigma-54 interaction domain AciPR4_2541 PF02954 Bacterial regulatory protein, Fis family AciPR4_2543 PF12704 MacB-like periplasmic core domain AciPR4_2543 PF00005 ABC transporter AciPR4_2543 PF02687 FtsX-like permease family AciPR4_2544 PF02687 FtsX-like permease family AciPR4_2544 PF00005 ABC transporter AciPR4_2544 PF12704 MacB-like periplasmic core domain AciPR4_2547 PF00005 ABC transporter AciPR4_2547 PF02687 FtsX-like permease family AciPR4_2547 PF12704 MacB-like periplasmic core domain AciPR4_2550 PF00860 Permease family AciPR4_2552 PF02540 NAD synthase AciPR4_2552 PF00795 Carbon-nitrogen hydrolase AciPR4_2553 PF02397 Bacterial sugar transferase AciPR4_2554 PF00005 ABC transporter AciPR4_2555 PF12804 MobA-like NTP transferase domain AciPR4_2556 PF01546 Peptidase family M20/M25/M40 AciPR4_2556 PF07687 Peptidase dimerisation domain AciPR4_2557 PF01209 ubiE/COQ5 methyltransferase family AciPR4_2559 PF00158 Sigma-54 interaction domain AciPR4_2559 PF00072 Response regulator receiver domain AciPR4_2559 PF02954 Bacterial regulatory protein, Fis family AciPR4_2560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2560 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_2560 PF00989 PAS fold AciPR4_2562 PF07516 SecA Wing and Scaffold domain AciPR4_2562 PF01043 SecA preprotein cross-linking domain AciPR4_2562 PF02810 SEC-C motif AciPR4_2562 PF07517 SecA DEAD-like domain AciPR4_2564 PF00589 Phage integrase family AciPR4_2564 PF02899 Phage integrase, N-terminal SAM-like domain AciPR4_2565 PF00589 Phage integrase family AciPR4_2565 PF02899 Phage integrase, N-terminal SAM-like domain AciPR4_2569 PF00528 Binding-protein-dependent transport system inner membrane component AciPR4_2570 PF01595 Cyclin M transmembrane N-terminal domain AciPR4_2570 PF03471 Transporter associated domain AciPR4_2570 PF00571 CBS domain AciPR4_2571 PF00085 Thioredoxin AciPR4_2573 PF00293 NUDIX domain AciPR4_2574 PF01566 Natural resistance-associated macrophage protein AciPR4_2577 PF01740 STAS domain AciPR4_2578 PF04011 LemA family AciPR4_2581 PF00326 Prolyl oligopeptidase family AciPR4_2581 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AciPR4_2582 PF00005 ABC transporter AciPR4_2582 PF00664 ABC transporter transmembrane region AciPR4_2586 PF13361 UvrD-like helicase C-terminal domain AciPR4_2586 PF00580 UvrD/REP helicase N-terminal domain AciPR4_2586 PF12705 PD-(D/E)XK nuclease superfamily AciPR4_2590 PF00535 Glycosyl transferase family 2 AciPR4_2594 PF00005 ABC transporter AciPR4_2594 PF13732 Domain of unknown function (DUF4162) AciPR4_2595 PF00392 Bacterial regulatory proteins, gntR family AciPR4_2595 PF07729 FCD domain AciPR4_2596 PF05343 M42 glutamyl aminopeptidase AciPR4_2599 PF01370 NAD dependent epimerase/dehydratase family AciPR4_2605 PF03808 Glycosyl transferase WecB/TagA/CpsF family AciPR4_2606 PF02397 Bacterial sugar transferase AciPR4_2607 PF13439 Glycosyltransferase Family 4 AciPR4_2607 PF00534 Glycosyl transferases group 1 AciPR4_2611 PF10531 SLBB domain AciPR4_2611 PF02563 Polysaccharide biosynthesis/export protein AciPR4_2614 PF00925 GTP cyclohydrolase II AciPR4_2614 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AciPR4_2618 PF04101 Glycosyltransferase family 28 C-terminal domain AciPR4_2621 PF00919 Uncharacterized protein family UPF0004 AciPR4_2621 PF01938 TRAM domain AciPR4_2621 PF04055 Radical SAM superfamily AciPR4_2622 PF00925 GTP cyclohydrolase II AciPR4_2625 PF17191 RecG wedge domain AciPR4_2625 PF00270 DEAD/DEAH box helicase AciPR4_2625 PF00271 Helicase conserved C-terminal domain AciPR4_2626 PF13188 PAS domain AciPR4_2626 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_2626 PF00072 Response regulator receiver domain AciPR4_2626 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2626 PF08448 PAS fold AciPR4_2627 PF02567 Phenazine biosynthesis-like protein AciPR4_2628 PF10417 C-terminal domain of 1-Cys peroxiredoxin AciPR4_2628 PF00578 AhpC/TSA family AciPR4_2629 PF00005 ABC transporter AciPR4_2629 PF12704 MacB-like periplasmic core domain AciPR4_2629 PF02687 FtsX-like permease family AciPR4_2631 PF02321 Outer membrane efflux protein AciPR4_2632 PF00873 AcrB/AcrD/AcrF family AciPR4_2633 PF00529 HlyD membrane-fusion protein of T1SS AciPR4_2633 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AciPR4_2634 PF00440 Bacterial regulatory proteins, tetR family AciPR4_2637 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AciPR4_2637 PF13378 Enolase C-terminal domain-like AciPR4_2638 PF00480 ROK family AciPR4_2641 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AciPR4_2641 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AciPR4_2649 PF13807 G-rich domain on putative tyrosine kinase AciPR4_2649 PF02706 Chain length determinant protein AciPR4_2649 PF13614 AAA domain AciPR4_2650 PF00756 Putative esterase AciPR4_2650 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AciPR4_2651 PF00324 Amino acid permease AciPR4_2653 PF00107 Zinc-binding dehydrogenase AciPR4_2653 PF08240 Alcohol dehydrogenase GroES-like domain AciPR4_2655 PF05336 L-rhamnose mutarotase AciPR4_2659 PF16355 Domain of unknown function (DUF4982) AciPR4_2659 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AciPR4_2659 PF00703 Glycosyl hydrolases family 2 AciPR4_2659 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AciPR4_2659 PF02837 Glycosyl hydrolases family 2, sugar binding domain AciPR4_2660 PF08533 Beta-galactosidase C-terminal domain AciPR4_2660 PF08532 Beta-galactosidase trimerisation domain AciPR4_2660 PF02449 Beta-galactosidase AciPR4_2661 PF01229 Glycosyl hydrolases family 39 AciPR4_2663 PF00356 Bacterial regulatory proteins, lacI family AciPR4_2667 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_2667 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2667 PF00672 HAMP domain AciPR4_2667 PF16750 Sensor domain of 2-component histidine kinase AciPR4_2668 PF00072 Response regulator receiver domain AciPR4_2668 PF00486 Transcriptional regulatory protein, C terminal AciPR4_2669 PF13533 Biotin-lipoyl like AciPR4_2670 PF00873 AcrB/AcrD/AcrF family AciPR4_2671 PF00873 AcrB/AcrD/AcrF family AciPR4_2672 PF02321 Outer membrane efflux protein AciPR4_2678 PF00486 Transcriptional regulatory protein, C terminal AciPR4_2678 PF00072 Response regulator receiver domain AciPR4_2681 PF17158 Membrane-associated sensor, integral membrane domain AciPR4_2681 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_2682 PF11741 AMIN domain AciPR4_2682 PF00263 Bacterial type II and III secretion system protein AciPR4_2682 PF07660 Secretin and TonB N terminus short domain AciPR4_2682 PF03958 Bacterial type II/III secretion system short domain AciPR4_2683 PF00263 Bacterial type II and III secretion system protein AciPR4_2683 PF03958 Bacterial type II/III secretion system short domain AciPR4_2689 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AciPR4_2690 PF01451 Low molecular weight phosphotyrosine protein phosphatase AciPR4_2691 PF01022 Bacterial regulatory protein, arsR family AciPR4_2692 PF01758 Sodium Bile acid symporter family AciPR4_2693 PF03551 Transcriptional regulator PadR-like family AciPR4_2695 PF00873 AcrB/AcrD/AcrF family AciPR4_2697 PF04052 TolB amino-terminal domain AciPR4_2697 PF07676 WD40-like Beta Propeller Repeat AciPR4_2698 PF00593 TonB dependent receptor AciPR4_2701 PF01544 CorA-like Mg2+ transporter protein AciPR4_2706 PF01244 Membrane dipeptidase (Peptidase family M19) AciPR4_2707 PF04321 RmlD substrate binding domain AciPR4_2708 PF01050 Mannose-6-phosphate isomerase AciPR4_2708 PF00483 Nucleotidyl transferase AciPR4_2709 PF01263 Aldose 1-epimerase AciPR4_2710 PF07470 Glycosyl Hydrolase Family 88 AciPR4_2711 PF00356 Bacterial regulatory proteins, lacI family AciPR4_2713 PF00295 Glycosyl hydrolases family 28 AciPR4_2716 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AciPR4_2716 PF08240 Alcohol dehydrogenase GroES-like domain AciPR4_2717 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain AciPR4_2717 PF02837 Glycosyl hydrolases family 2, sugar binding domain AciPR4_2717 PF00703 Glycosyl hydrolases family 2 AciPR4_2718 PF00486 Transcriptional regulatory protein, C terminal AciPR4_2718 PF00072 Response regulator receiver domain AciPR4_2722 PF02687 FtsX-like permease family AciPR4_2722 PF12704 MacB-like periplasmic core domain AciPR4_2722 PF00005 ABC transporter AciPR4_2723 PF12704 MacB-like periplasmic core domain AciPR4_2723 PF02687 FtsX-like permease family AciPR4_2725 PF16874 Glycosyl hydrolase family 36 C-terminal domain AciPR4_2725 PF16875 Glycosyl hydrolase family 36 N-terminal domain AciPR4_2727 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AciPR4_2727 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AciPR4_2729 PF07690 Major Facilitator Superfamily AciPR4_2730 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AciPR4_2731 PF00356 Bacterial regulatory proteins, lacI family AciPR4_2733 PF13360 PQQ-like domain AciPR4_2733 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AciPR4_2735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AciPR4_2738 PF01614 Bacterial transcriptional regulator AciPR4_2738 PF09339 IclR helix-turn-helix domain AciPR4_2742 PF00474 Sodium:solute symporter family AciPR4_2743 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AciPR4_2746 PF00356 Bacterial regulatory proteins, lacI family AciPR4_2748 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AciPR4_2749 PF00085 Thioredoxin AciPR4_2752 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AciPR4_2752 PF18029 Glyoxalase-like domain AciPR4_2754 PF00128 Alpha amylase, catalytic domain AciPR4_2754 PF09087 Cyclomaltodextrinase, N-terminal AciPR4_2754 PF10438 Cyclo-malto-dextrinase C-terminal domain AciPR4_2756 PF00486 Transcriptional regulatory protein, C terminal AciPR4_2756 PF00072 Response regulator receiver domain AciPR4_2757 PF13802 Galactose mutarotase-like AciPR4_2757 PF01055 Glycosyl hydrolases family 31 AciPR4_2757 PF17137 Domain of unknown function (DUF5110) AciPR4_2757 PF16338 Domain of unknown function (DUF4968) AciPR4_2758 PF00295 Glycosyl hydrolases family 28 AciPR4_2759 PF01095 Pectinesterase AciPR4_2768 PF00884 Sulfatase AciPR4_2768 PF16347 Domain of unknown function (DUF4976) AciPR4_2770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2770 PF07694 5TMR of 5TMR-LYT AciPR4_2770 PF06580 Histidine kinase AciPR4_2771 PF04397 LytTr DNA-binding domain AciPR4_2771 PF00072 Response regulator receiver domain AciPR4_2772 PF07995 Glucose / Sorbosone dehydrogenase AciPR4_2774 PF00672 HAMP domain AciPR4_2774 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_2774 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2775 PF00072 Response regulator receiver domain AciPR4_2775 PF00486 Transcriptional regulatory protein, C terminal AciPR4_2779 PF00873 AcrB/AcrD/AcrF family AciPR4_2780 PF01261 Xylose isomerase-like TIM barrel AciPR4_2784 PF00072 Response regulator receiver domain AciPR4_2784 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_2785 PF08281 Sigma-70, region 4 AciPR4_2785 PF04542 Sigma-70 region 2 AciPR4_2786 PF00069 Protein kinase domain AciPR4_2786 PF03793 PASTA domain AciPR4_2791 PF01112 Asparaginase AciPR4_2792 PF00593 TonB dependent receptor AciPR4_2793 PF02423 Ornithine cyclodeaminase/mu-crystallin family AciPR4_2794 PF00291 Pyridoxal-phosphate dependent enzyme AciPR4_2794 PF13291 ACT domain AciPR4_2795 PF00528 Binding-protein-dependent transport system inner membrane component AciPR4_2797 PF00005 ABC transporter AciPR4_2797 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AciPR4_2799 PF04303 PrpF protein AciPR4_2800 PF00330 Aconitase family (aconitate hydratase) AciPR4_2800 PF00694 Aconitase C-terminal domain AciPR4_2801 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AciPR4_2804 PF00694 Aconitase C-terminal domain AciPR4_2804 PF00330 Aconitase family (aconitate hydratase) AciPR4_2806 PF07690 Major Facilitator Superfamily AciPR4_2807 PF03737 Aldolase/RraA AciPR4_2809 PF00196 Bacterial regulatory proteins, luxR family AciPR4_2810 PF00155 Aminotransferase class I and II AciPR4_2816 PF00465 Iron-containing alcohol dehydrogenase AciPR4_2817 PF03328 HpcH/HpaI aldolase/citrate lyase family AciPR4_2818 PF00474 Sodium:solute symporter family AciPR4_2819 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AciPR4_2820 PF17042 Nucleotide-binding C-terminal domain AciPR4_2820 PF07005 Sugar-binding N-terminal domain AciPR4_2823 PF00593 TonB dependent receptor AciPR4_2825 PF12833 Helix-turn-helix domain AciPR4_2826 PF05199 GMC oxidoreductase AciPR4_2826 PF00732 GMC oxidoreductase AciPR4_2830 PF17754 MftR C-terminal domain AciPR4_2830 PF00440 Bacterial regulatory proteins, tetR family AciPR4_2831 PF00106 short chain dehydrogenase AciPR4_2833 PF00486 Transcriptional regulatory protein, C terminal AciPR4_2836 PF00440 Bacterial regulatory proteins, tetR family AciPR4_2836 PF08361 MAATS-type transcriptional repressor, C-terminal region AciPR4_2839 PF07992 Pyridine nucleotide-disulphide oxidoreductase AciPR4_2841 PF00535 Glycosyl transferase family 2 AciPR4_2845 PF00593 TonB dependent receptor AciPR4_2848 PF00392 Bacterial regulatory proteins, gntR family AciPR4_2848 PF07729 FCD domain AciPR4_2849 PF00294 pfkB family carbohydrate kinase AciPR4_2854 PF00672 HAMP domain AciPR4_2854 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_2854 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2855 PF00486 Transcriptional regulatory protein, C terminal AciPR4_2855 PF00072 Response regulator receiver domain AciPR4_2856 PF00072 Response regulator receiver domain AciPR4_2856 PF00158 Sigma-54 interaction domain AciPR4_2856 PF02954 Bacterial regulatory protein, Fis family AciPR4_2857 PF13188 PAS domain AciPR4_2857 PF00989 PAS fold AciPR4_2857 PF13426 PAS domain AciPR4_2857 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_2857 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2860 PF07690 Major Facilitator Superfamily AciPR4_2865 PF02743 Cache domain AciPR4_2865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2865 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_2869 PF08521 Two-component sensor kinase N-terminal AciPR4_2869 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2869 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_2870 PF00072 Response regulator receiver domain AciPR4_2870 PF00486 Transcriptional regulatory protein, C terminal AciPR4_2884 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AciPR4_2884 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AciPR4_2885 PF00730 HhH-GPD superfamily base excision DNA repair protein AciPR4_2886 PF02805 Metal binding domain of Ada AciPR4_2886 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AciPR4_2886 PF12833 Helix-turn-helix domain AciPR4_2886 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AciPR4_2887 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA AciPR4_2888 PF13532 2OG-Fe(II) oxygenase superfamily AciPR4_2890 PF06736 Protein of unknown function (DUF1211) AciPR4_2891 PF02311 AraC-like ligand binding domain AciPR4_2891 PF12833 Helix-turn-helix domain AciPR4_2892 PF01494 FAD binding domain AciPR4_2893 PF01548 Transposase AciPR4_2893 PF02371 Transposase IS116/IS110/IS902 family AciPR4_2898 PF04255 Protein of unknown function (DUF433) AciPR4_2899 PF18480 Domain of unknown function (DUF5615) AciPR4_2900 PF01638 HxlR-like helix-turn-helix AciPR4_2904 PF07690 Major Facilitator Superfamily AciPR4_2905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AciPR4_2905 PF00529 HlyD membrane-fusion protein of T1SS AciPR4_2906 PF03466 LysR substrate binding domain AciPR4_2906 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AciPR4_2909 PF02311 AraC-like ligand binding domain AciPR4_2909 PF12833 Helix-turn-helix domain AciPR4_2912 PF00593 TonB dependent receptor AciPR4_2912 PF07715 TonB-dependent Receptor Plug Domain AciPR4_2913 PF18331 PKHD-type hydroxylase C-terminal domain AciPR4_2913 PF13640 2OG-Fe(II) oxygenase superfamily AciPR4_2918 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_2918 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_2918 PF00989 PAS fold AciPR4_2920 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_2921 PF17762 HTH domain found in ParB protein AciPR4_2921 PF02195 ParB-like nuclease domain AciPR4_2934 PF01434 Peptidase family M41 AciPR4_2934 PF17862 AAA+ lid domain AciPR4_2934 PF00004 ATPase family associated with various cellular activities (AAA) AciPR4_2940 PF07057 DNA helicase TraI AciPR4_2940 PF08751 TrwC relaxase AciPR4_2940 PF18272 single-stranded DNA binding TraI N-terminal subdomain AciPR4_2940 PF18340 DNA relaxase TraI 2B/2B-like domain AciPR4_2946 PF00437 Type II/IV secretion system protein AciPR4_2958 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AciPR4_2958 PF03466 LysR substrate binding domain AciPR4_2961 PF04542 Sigma-70 region 2 AciPR4_2961 PF08281 Sigma-70, region 4 AciPR4_2964 PF00535 Glycosyl transferase family 2 AciPR4_2966 PF02371 Transposase IS116/IS110/IS902 family AciPR4_2966 PF01548 Transposase AciPR4_2968 PF00216 Bacterial DNA-binding protein AciPR4_2969 PF03061 Thioesterase superfamily AciPR4_2970 PF00857 Isochorismatase family AciPR4_2972 PF01255 Putative undecaprenyl diphosphate synthase AciPR4_2975 PF13288 DXP reductoisomerase C-terminal domain AciPR4_2975 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AciPR4_2975 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AciPR4_2976 PF02163 Peptidase family M50 AciPR4_2976 PF17820 PDZ domain AciPR4_2980 PF00999 Sodium/hydrogen exchanger family AciPR4_2983 PF00348 Polyprenyl synthetase AciPR4_2986 PF10079 Bacillithiol biosynthesis BshC AciPR4_2987 PF00293 NUDIX domain AciPR4_2988 PF00313 'Cold-shock' DNA-binding domain AciPR4_2989 PF14716 Helix-hairpin-helix domain AciPR4_2989 PF14791 DNA polymerase beta thumb AciPR4_2989 PF02811 PHP domain AciPR4_2993 PF00285 Citrate synthase, C-terminal domain AciPR4_2995 PF01966 HD domain AciPR4_2996 PF07715 TonB-dependent Receptor Plug Domain AciPR4_2996 PF00593 TonB dependent receptor AciPR4_3002 PF01738 Dienelactone hydrolase family AciPR4_3004 PF03466 LysR substrate binding domain AciPR4_3004 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AciPR4_3010 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AciPR4_3016 PF09210 Domain of unknown function (DUF1957) AciPR4_3016 PF03065 Glycosyl hydrolase family 57 AciPR4_3019 PF00300 Histidine phosphatase superfamily (branch 1) AciPR4_3020 PF02541 Ppx/GppA phosphatase family AciPR4_3021 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AciPR4_3024 PF13411 MerR HTH family regulatory protein AciPR4_3025 PF00106 short chain dehydrogenase AciPR4_3026 PF00684 DnaJ central domain AciPR4_3026 PF00226 DnaJ domain AciPR4_3026 PF01556 DnaJ C terminal domain AciPR4_3028 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AciPR4_3028 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AciPR4_3028 PF06827 Zinc finger found in FPG and IleRS AciPR4_3029 PF01381 Helix-turn-helix AciPR4_3030 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB AciPR4_3032 PF00012 Hsp70 protein AciPR4_3040 PF00482 Type II secretion system (T2SS), protein F AciPR4_3041 PF01521 Iron-sulphur cluster biosynthesis AciPR4_3044 PF01757 Acyltransferase family AciPR4_3045 PF00696 Amino acid kinase family AciPR4_3046 PF00889 Elongation factor TS AciPR4_3047 PF00318 Ribosomal protein S2 AciPR4_3048 PF00380 Ribosomal protein S9/S16 AciPR4_3049 PF00572 Ribosomal protein L13 AciPR4_3051 PF12704 MacB-like periplasmic core domain AciPR4_3051 PF02687 FtsX-like permease family AciPR4_3054 PF00106 short chain dehydrogenase AciPR4_3057 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AciPR4_3057 PF12833 Helix-turn-helix domain AciPR4_3057 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AciPR4_3057 PF02805 Metal binding domain of Ada AciPR4_3058 PF05221 S-adenosyl-L-homocysteine hydrolase AciPR4_3058 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AciPR4_3061 PF01502 Phosphoribosyl-AMP cyclohydrolase AciPR4_3062 PF01634 ATP phosphoribosyltransferase AciPR4_3062 PF08029 HisG, C-terminal domain AciPR4_3063 PF00815 Histidinol dehydrogenase AciPR4_3064 PF00155 Aminotransferase class I and II AciPR4_3065 PF00475 Imidazoleglycerol-phosphate dehydratase AciPR4_3066 PF00117 Glutamine amidotransferase class-I AciPR4_3067 PF00977 Histidine biosynthesis protein AciPR4_3068 PF00977 Histidine biosynthesis protein AciPR4_3073 PF03976 Polyphosphate kinase 2 (PPK2) AciPR4_3074 PF02416 mttA/Hcf106 family AciPR4_3076 PF00483 Nucleotidyl transferase AciPR4_3080 PF01571 Aminomethyltransferase folate-binding domain AciPR4_3080 PF08669 Glycine cleavage T-protein C-terminal barrel domain AciPR4_3081 PF01597 Glycine cleavage H-protein AciPR4_3083 PF02347 Glycine cleavage system P-protein AciPR4_3085 PF02347 Glycine cleavage system P-protein AciPR4_3094 PF00145 C-5 cytosine-specific DNA methylase AciPR4_3094 PF01381 Helix-turn-helix AciPR4_3110 PF00593 TonB dependent receptor AciPR4_3111 PF00005 ABC transporter AciPR4_3111 PF12848 ABC transporter AciPR4_3112 PF01791 DeoC/LacD family aldolase AciPR4_3113 PF01145 SPFH domain / Band 7 family AciPR4_3113 PF16200 C-terminal region of band_7 AciPR4_3114 PF00392 Bacterial regulatory proteins, gntR family AciPR4_3116 PF00117 Glutamine amidotransferase class-I AciPR4_3116 PF00958 GMP synthase C terminal domain AciPR4_3116 PF02540 NAD synthase AciPR4_3119 PF00133 tRNA synthetases class I (I, L, M and V) AciPR4_3119 PF13603 Leucyl-tRNA synthetase, Domain 2 AciPR4_3119 PF08264 Anticodon-binding domain of tRNA AciPR4_3121 PF01261 Xylose isomerase-like TIM barrel AciPR4_3124 PF01396 Topoisomerase DNA binding C4 zinc finger AciPR4_3124 PF01751 Toprim domain AciPR4_3124 PF01131 DNA topoisomerase AciPR4_3125 PF02481 DNA recombination-mediator protein A AciPR4_3125 PF17782 DprA winged helix domain AciPR4_3127 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AciPR4_3127 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AciPR4_3129 PF00919 Uncharacterized protein family UPF0004 AciPR4_3129 PF18693 TRAM domain AciPR4_3129 PF04055 Radical SAM superfamily AciPR4_3131 PF03884 DNA gyrase inhibitor YacG AciPR4_3132 PF04608 Phosphatidylglycerophosphatase A AciPR4_3136 PF00994 Probable molybdopterin binding domain AciPR4_3136 PF02464 Competence-damaged protein AciPR4_3137 PF02660 Glycerol-3-phosphate acyltransferase AciPR4_3138 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AciPR4_3138 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AciPR4_3139 PF00448 SRP54-type protein, GTPase domain AciPR4_3139 PF02881 SRP54-type protein, helical bundle domain AciPR4_3140 PF03841 L-seryl-tRNA selenium transferase AciPR4_3142 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AciPR4_3142 PF01872 RibD C-terminal domain AciPR4_3143 PF00677 Lumazine binding domain AciPR4_3144 PF00265 Thymidine kinase AciPR4_3146 PF01906 Putative heavy-metal-binding AciPR4_3147 PF02885 Glycosyl transferase family, helical bundle domain AciPR4_3147 PF00591 Glycosyl transferase family, a/b domain AciPR4_3148 PF08442 ATP-grasp domain AciPR4_3148 PF00549 CoA-ligase AciPR4_3149 PF02629 CoA binding domain AciPR4_3149 PF00549 CoA-ligase AciPR4_3150 PF00334 Nucleoside diphosphate kinase AciPR4_3154 PF04542 Sigma-70 region 2 AciPR4_3154 PF08281 Sigma-70, region 4 AciPR4_3155 PF00080 Copper/zinc superoxide dismutase (SODC) AciPR4_3162 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AciPR4_3164 PF01063 Amino-transferase class IV AciPR4_3165 PF11954 Domain of unknown function (DUF3471) AciPR4_3165 PF00144 Beta-lactamase AciPR4_3167 PF07992 Pyridine nucleotide-disulphide oxidoreductase AciPR4_3168 PF00474 Sodium:solute symporter family AciPR4_3169 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AciPR4_3169 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AciPR4_3170 PF03631 Virulence factor BrkB AciPR4_3175 PF02594 Uncharacterised ACR, YggU family COG1872 AciPR4_3176 PF01168 Alanine racemase, N-terminal domain AciPR4_3179 PF07992 Pyridine nucleotide-disulphide oxidoreductase AciPR4_3183 PF02033 Ribosome-binding factor A AciPR4_3184 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AciPR4_3191 PF00571 CBS domain AciPR4_3191 PF00478 IMP dehydrogenase / GMP reductase domain AciPR4_3192 PF00563 EAL domain AciPR4_3192 PF08495 FIST N domain AciPR4_3192 PF10442 FIST C domain AciPR4_3192 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_3194 PF02576 RimP N-terminal domain AciPR4_3194 PF17384 RimP C-terminal SH3 domain AciPR4_3195 PF08529 NusA N-terminal domain AciPR4_3195 PF13184 NusA-like KH domain AciPR4_3195 PF00575 S1 RNA binding domain AciPR4_3196 PF00009 Elongation factor Tu GTP binding domain AciPR4_3196 PF11987 Translation-initiation factor 2 AciPR4_3196 PF04760 Translation initiation factor IF-2, N-terminal region AciPR4_3196 PF03144 Elongation factor Tu domain 2 AciPR4_3207 PF01196 Ribosomal protein L17 AciPR4_3208 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AciPR4_3208 PF01000 RNA polymerase Rpb3/RpoA insert domain AciPR4_3208 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AciPR4_3209 PF00163 Ribosomal protein S4/S9 N-terminal domain AciPR4_3209 PF01479 S4 domain AciPR4_3210 PF00411 Ribosomal protein S11 AciPR4_3211 PF00416 Ribosomal protein S13/S18 AciPR4_3212 PF00444 Ribosomal protein L36 AciPR4_3213 PF01176 Translation initiation factor 1A / IF-1 AciPR4_3214 PF00557 Metallopeptidase family M24 AciPR4_3215 PF05191 Adenylate kinase, active site lid AciPR4_3216 PF00344 SecY translocase AciPR4_3217 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AciPR4_3218 PF00327 Ribosomal protein L30p/L7e AciPR4_3219 PF00333 Ribosomal protein S5, N-terminal domain AciPR4_3219 PF03719 Ribosomal protein S5, C-terminal domain AciPR4_3220 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AciPR4_3221 PF00347 Ribosomal protein L6 AciPR4_3222 PF00410 Ribosomal protein S8 AciPR4_3223 PF00253 Ribosomal protein S14p/S29e AciPR4_3224 PF00281 Ribosomal protein L5 AciPR4_3224 PF00673 ribosomal L5P family C-terminus AciPR4_3225 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AciPR4_3225 PF00467 KOW motif AciPR4_3226 PF00238 Ribosomal protein L14p/L23e AciPR4_3227 PF00366 Ribosomal protein S17 AciPR4_3228 PF00831 Ribosomal L29 protein AciPR4_3229 PF00252 Ribosomal protein L16p/L10e AciPR4_3230 PF07650 KH domain AciPR4_3230 PF00189 Ribosomal protein S3, C-terminal domain AciPR4_3231 PF00237 Ribosomal protein L22p/L17e AciPR4_3232 PF00203 Ribosomal protein S19 AciPR4_3233 PF00181 Ribosomal Proteins L2, RNA binding domain AciPR4_3233 PF03947 Ribosomal Proteins L2, C-terminal domain AciPR4_3234 PF00276 Ribosomal protein L23 AciPR4_3235 PF00573 Ribosomal protein L4/L1 family AciPR4_3236 PF00297 Ribosomal protein L3 AciPR4_3237 PF00338 Ribosomal protein S10p/S20e AciPR4_3238 PF00009 Elongation factor Tu GTP binding domain AciPR4_3238 PF03144 Elongation factor Tu domain 2 AciPR4_3238 PF03143 Elongation factor Tu C-terminal domain AciPR4_3239 PF00679 Elongation factor G C-terminus AciPR4_3239 PF14492 Elongation Factor G, domain II AciPR4_3239 PF00009 Elongation factor Tu GTP binding domain AciPR4_3239 PF03144 Elongation factor Tu domain 2 AciPR4_3239 PF03764 Elongation factor G, domain IV AciPR4_3240 PF00177 Ribosomal protein S7p/S5e AciPR4_3241 PF00164 Ribosomal protein S12/S23 AciPR4_3245 PF02525 Flavodoxin-like fold AciPR4_3246 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AciPR4_3247 PF07676 WD40-like Beta Propeller Repeat AciPR4_3247 PF00326 Prolyl oligopeptidase family AciPR4_3254 PF00753 Metallo-beta-lactamase superfamily AciPR4_3257 PF01555 DNA methylase AciPR4_3260 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AciPR4_3260 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AciPR4_3261 PF02874 ATP synthase alpha/beta family, beta-barrel domain AciPR4_3261 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AciPR4_3262 PF00231 ATP synthase AciPR4_3264 PF02874 ATP synthase alpha/beta family, beta-barrel domain AciPR4_3264 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AciPR4_3264 PF00306 ATP synthase alpha/beta chain, C terminal domain AciPR4_3265 PF00213 ATP synthase delta (OSCP) subunit AciPR4_3268 PF16360 GTP-binding GTPase Middle Region AciPR4_3268 PF13167 GTP-binding GTPase N-terminal AciPR4_3268 PF01926 50S ribosome-binding GTPase AciPR4_3269 PF17209 Hfq protein AciPR4_3270 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AciPR4_3272 PF07690 Major Facilitator Superfamily AciPR4_3273 PF00440 Bacterial regulatory proteins, tetR family AciPR4_3275 PF00391 PEP-utilising enzyme, mobile domain AciPR4_3275 PF00224 Pyruvate kinase, barrel domain AciPR4_3275 PF02887 Pyruvate kinase, alpha/beta domain AciPR4_3276 PF03631 Virulence factor BrkB AciPR4_3278 PF02616 Segregation and condensation protein ScpA AciPR4_3281 PF00579 tRNA synthetases class I (W and Y) AciPR4_3282 PF02163 Peptidase family M50 AciPR4_3291 PF04055 Radical SAM superfamily AciPR4_3291 PF06463 Molybdenum Cofactor Synthesis C AciPR4_3292 PF00072 Response regulator receiver domain AciPR4_3292 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_3296 PF00248 Aldo/keto reductase family AciPR4_3298 PF00117 Glutamine amidotransferase class-I AciPR4_3298 PF06418 CTP synthase N-terminus AciPR4_3304 PF00793 DAHP synthetase I family AciPR4_3308 PF00578 AhpC/TSA family AciPR4_3309 PF01522 Polysaccharide deacetylase AciPR4_3310 PF08281 Sigma-70, region 4 AciPR4_3310 PF04542 Sigma-70 region 2 AciPR4_3312 PF13180 PDZ domain AciPR4_3313 PF14403 Circularly permuted ATP-grasp type 2 AciPR4_3316 PF08379 Bacterial transglutaminase-like N-terminal region AciPR4_3316 PF01841 Transglutaminase-like superfamily AciPR4_3317 PF00106 short chain dehydrogenase AciPR4_3318 PF01565 FAD binding domain AciPR4_3318 PF04030 D-arabinono-1,4-lactone oxidase AciPR4_3320 PF01590 GAF domain AciPR4_3320 PF00360 Phytochrome region AciPR4_3320 PF08446 PAS fold AciPR4_3320 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_3320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_3321 PF00453 Ribosomal protein L20 AciPR4_3322 PF01632 Ribosomal protein L35 AciPR4_3324 PF00204 DNA gyrase B AciPR4_3324 PF00986 DNA gyrase B subunit, carboxyl terminus AciPR4_3324 PF18053 DNA gyrase B subunit insert domain AciPR4_3324 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_3324 PF01751 Toprim domain AciPR4_3325 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AciPR4_3326 PF01850 PIN domain AciPR4_3327 PF00704 Glycosyl hydrolases family 18 AciPR4_3327 PF00553 Cellulose binding domain AciPR4_3327 PF00041 Fibronectin type III domain AciPR4_3328 PF01425 Amidase AciPR4_3329 PF00106 short chain dehydrogenase AciPR4_3330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AciPR4_3330 PF00005 ABC transporter AciPR4_3331 PF04193 PQ loop repeat AciPR4_3340 PF13186 Iron-sulfur cluster-binding domain AciPR4_3340 PF04055 Radical SAM superfamily AciPR4_3341 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_3341 PF00989 PAS fold AciPR4_3341 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_3344 PF03641 Possible lysine decarboxylase AciPR4_3347 PF12848 ABC transporter AciPR4_3347 PF16326 ABC transporter C-terminal domain AciPR4_3347 PF00005 ABC transporter AciPR4_3349 PF00311 Phosphoenolpyruvate carboxylase AciPR4_3351 PF00593 TonB dependent receptor AciPR4_3352 PF07690 Major Facilitator Superfamily AciPR4_3353 PF00563 EAL domain AciPR4_3353 PF03707 Bacterial signalling protein N terminal repeat AciPR4_3353 PF13188 PAS domain AciPR4_3353 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_3354 PF03707 Bacterial signalling protein N terminal repeat AciPR4_3354 PF00563 EAL domain AciPR4_3354 PF13188 PAS domain AciPR4_3354 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_3357 PF00535 Glycosyl transferase family 2 AciPR4_3357 PF07238 PilZ domain AciPR4_3357 PF03552 Cellulose synthase AciPR4_3357 PF03170 Bacterial cellulose synthase subunit AciPR4_3358 PF01263 Aldose 1-epimerase AciPR4_3359 PF01619 Proline dehydrogenase AciPR4_3361 PF01979 Amidohydrolase family AciPR4_3362 PF01979 Amidohydrolase family AciPR4_3363 PF00593 TonB dependent receptor AciPR4_3364 PF00392 Bacterial regulatory proteins, gntR family AciPR4_3364 PF07729 FCD domain AciPR4_3365 PF00171 Aldehyde dehydrogenase family AciPR4_3371 PF00182 Chitinase class I AciPR4_3374 PF13520 Amino acid permease AciPR4_3375 PF07690 Major Facilitator Superfamily AciPR4_3376 PF00719 Inorganic pyrophosphatase AciPR4_3379 PF13439 Glycosyltransferase Family 4 AciPR4_3379 PF00534 Glycosyl transferases group 1 AciPR4_3382 PF00005 ABC transporter AciPR4_3382 PF12704 MacB-like periplasmic core domain AciPR4_3382 PF02687 FtsX-like permease family AciPR4_3385 PF00593 TonB dependent receptor AciPR4_3388 PF00360 Phytochrome region AciPR4_3388 PF00563 EAL domain AciPR4_3388 PF01590 GAF domain AciPR4_3388 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_3390 PF01380 SIS domain AciPR4_3391 PF02086 D12 class N6 adenine-specific DNA methyltransferase AciPR4_3395 PF01327 Polypeptide deformylase AciPR4_3400 PF00773 RNB domain AciPR4_3400 PF08206 Ribonuclease B OB domain AciPR4_3400 PF00575 S1 RNA binding domain AciPR4_3401 PF10017 Histidine-specific methyltransferase, SAM-dependent AciPR4_3402 PF00069 Protein kinase domain AciPR4_3402 PF03781 Sulfatase-modifying factor enzyme 1 AciPR4_3403 PF02687 FtsX-like permease family AciPR4_3403 PF12704 MacB-like periplasmic core domain AciPR4_3404 PF00005 ABC transporter AciPR4_3406 PF01593 Flavin containing amine oxidoreductase AciPR4_3407 PF16925 Tetracyclin repressor-like, C-terminal domain AciPR4_3407 PF00440 Bacterial regulatory proteins, tetR family AciPR4_3408 PF00106 short chain dehydrogenase AciPR4_3413 PF00575 S1 RNA binding domain AciPR4_3414 PF00892 EamA-like transporter family AciPR4_3416 PF05496 Holliday junction DNA helicase RuvB P-loop domain AciPR4_3416 PF05491 RuvB C-terminal winged helix domain AciPR4_3416 PF17864 RuvB AAA lid domain AciPR4_3417 PF01757 Acyltransferase family AciPR4_3419 PF13936 Helix-turn-helix domain AciPR4_3419 PF00665 Integrase core domain AciPR4_3426 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AciPR4_3426 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AciPR4_3426 PF06827 Zinc finger found in FPG and IleRS AciPR4_3428 PF00709 Adenylosuccinate synthetase AciPR4_3432 PF01230 HIT domain AciPR4_3433 PF01406 tRNA synthetases class I (C) catalytic domain AciPR4_3433 PF09190 DALR domain AciPR4_3434 PF00814 Glycoprotease family AciPR4_3435 PF12627 Probable RNA and SrmB- binding site of polymerase A AciPR4_3435 PF13735 tRNA nucleotidyltransferase domain 2 putative AciPR4_3435 PF01743 Poly A polymerase head domain AciPR4_3436 PF01593 Flavin containing amine oxidoreductase AciPR4_3437 PF04055 Radical SAM superfamily AciPR4_3441 PF07995 Glucose / Sorbosone dehydrogenase AciPR4_3442 PF03946 Ribosomal protein L11, N-terminal domain AciPR4_3442 PF00298 Ribosomal protein L11, RNA binding domain AciPR4_3443 PF02357 Transcription termination factor nusG AciPR4_3443 PF00467 KOW motif AciPR4_3445 PF00471 Ribosomal protein L33 AciPR4_3446 PF03144 Elongation factor Tu domain 2 AciPR4_3446 PF03143 Elongation factor Tu C-terminal domain AciPR4_3446 PF00009 Elongation factor Tu GTP binding domain AciPR4_3451 PF04030 D-arabinono-1,4-lactone oxidase AciPR4_3451 PF01565 FAD binding domain AciPR4_3452 PF00583 Acetyltransferase (GNAT) family AciPR4_3454 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AciPR4_3454 PF00703 Glycosyl hydrolases family 2 AciPR4_3454 PF02837 Glycosyl hydrolases family 2, sugar binding domain AciPR4_3454 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AciPR4_3455 PF00232 Glycosyl hydrolase family 1 AciPR4_3456 PF01551 Peptidase family M23 AciPR4_3456 PF01476 LysM domain AciPR4_3457 PF02769 AIR synthase related protein, C-terminal domain AciPR4_3457 PF00586 AIR synthase related protein, N-terminal domain AciPR4_3461 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AciPR4_3468 PF00291 Pyridoxal-phosphate dependent enzyme AciPR4_3470 PF00581 Rhodanese-like domain AciPR4_3470 PF00899 ThiF family AciPR4_3471 PF01022 Bacterial regulatory protein, arsR family AciPR4_3474 PF03447 Homoserine dehydrogenase, NAD binding domain AciPR4_3474 PF01842 ACT domain AciPR4_3474 PF00742 Homoserine dehydrogenase AciPR4_3475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AciPR4_3476 PF01979 Amidohydrolase family AciPR4_3478 PF00576 HIUase/Transthyretin family AciPR4_3479 PF01014 Uricase AciPR4_3480 PF07687 Peptidase dimerisation domain AciPR4_3480 PF01546 Peptidase family M20/M25/M40 AciPR4_3482 PF07687 Peptidase dimerisation domain AciPR4_3482 PF01546 Peptidase family M20/M25/M40 AciPR4_3483 PF00171 Aldehyde dehydrogenase family AciPR4_3486 PF00128 Alpha amylase, catalytic domain AciPR4_3486 PF11941 Domain of unknown function (DUF3459) AciPR4_3487 PF00128 Alpha amylase, catalytic domain AciPR4_3488 PF00128 Alpha amylase, catalytic domain AciPR4_3488 PF11896 Domain of unknown function (DUF3416) AciPR4_3489 PF16657 Maltogenic Amylase, C-terminal domain AciPR4_3489 PF00128 Alpha amylase, catalytic domain AciPR4_3492 PF00550 Phosphopantetheine attachment site AciPR4_3495 PF13361 UvrD-like helicase C-terminal domain AciPR4_3495 PF00580 UvrD/REP helicase N-terminal domain AciPR4_3497 PF13520 Amino acid permease AciPR4_3503 PF00698 Acyl transferase domain AciPR4_3504 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AciPR4_3504 PF00005 ABC transporter AciPR4_3506 PF01734 Patatin-like phospholipase AciPR4_3507 PF02021 Uncharacterised protein family UPF0102 AciPR4_3511 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AciPR4_3511 PF00703 Glycosyl hydrolases family 2 AciPR4_3511 PF02837 Glycosyl hydrolases family 2, sugar binding domain AciPR4_3519 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AciPR4_3520 PF08645 Polynucleotide kinase 3 phosphatase AciPR4_3521 PF02397 Bacterial sugar transferase AciPR4_3522 PF00534 Glycosyl transferases group 1 AciPR4_3522 PF13439 Glycosyltransferase Family 4 AciPR4_3524 PF02686 Glu-tRNAGln amidotransferase C subunit AciPR4_3525 PF01425 Amidase AciPR4_3528 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AciPR4_3528 PF07992 Pyridine nucleotide-disulphide oxidoreductase AciPR4_3529 PF00144 Beta-lactamase AciPR4_3529 PF11954 Domain of unknown function (DUF3471) AciPR4_3530 PF01926 50S ribosome-binding GTPase AciPR4_3530 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AciPR4_3531 PF06733 DEAD_2 AciPR4_3531 PF13307 Helicase C-terminal domain AciPR4_3535 PF03169 OPT oligopeptide transporter protein AciPR4_3539 PF14622 Ribonuclease-III-like AciPR4_3539 PF00035 Double-stranded RNA binding motif AciPR4_3540 PF10502 Signal peptidase, peptidase S26 AciPR4_3541 PF10502 Signal peptidase, peptidase S26 AciPR4_3542 PF10502 Signal peptidase, peptidase S26 AciPR4_3545 PF08032 RNA 2'-O ribose methyltransferase substrate binding AciPR4_3545 PF00588 SpoU rRNA Methylase family AciPR4_3546 PF04542 Sigma-70 region 2 AciPR4_3546 PF08281 Sigma-70, region 4 AciPR4_3549 PF04397 LytTr DNA-binding domain AciPR4_3549 PF00072 Response regulator receiver domain AciPR4_3551 PF16483 Beta-1,3-glucanase AciPR4_3551 PF00652 Ricin-type beta-trefoil lectin domain AciPR4_3552 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AciPR4_3552 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AciPR4_3552 PF00205 Thiamine pyrophosphate enzyme, central domain AciPR4_3553 PF07690 Major Facilitator Superfamily AciPR4_3554 PF00355 Rieske [2Fe-2S] domain AciPR4_3555 PF00581 Rhodanese-like domain AciPR4_3556 PF10417 C-terminal domain of 1-Cys peroxiredoxin AciPR4_3556 PF00578 AhpC/TSA family AciPR4_3557 PF04542 Sigma-70 region 2 AciPR4_3557 PF08281 Sigma-70, region 4 AciPR4_3558 PF12697 Alpha/beta hydrolase family AciPR4_3562 PF03454 MoeA C-terminal region (domain IV) AciPR4_3562 PF00994 Probable molybdopterin binding domain AciPR4_3562 PF03453 MoeA N-terminal region (domain I and II) AciPR4_3564 PF12704 MacB-like periplasmic core domain AciPR4_3564 PF02687 FtsX-like permease family AciPR4_3564 PF00005 ABC transporter AciPR4_3566 PF05163 DinB family AciPR4_3568 PF06508 Queuosine biosynthesis protein QueC AciPR4_3572 PF01842 ACT domain AciPR4_3572 PF00551 Formyl transferase AciPR4_3573 PF04055 Radical SAM superfamily AciPR4_3574 PF01242 6-pyruvoyl tetrahydropterin synthase AciPR4_3579 PF00271 Helicase conserved C-terminal domain AciPR4_3579 PF08494 DEAD/H associated AciPR4_3579 PF00270 DEAD/DEAH box helicase AciPR4_3580 PF00593 TonB dependent receptor AciPR4_3583 PF08281 Sigma-70, region 4 AciPR4_3583 PF04542 Sigma-70 region 2 AciPR4_3585 PF03466 LysR substrate binding domain AciPR4_3585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AciPR4_3586 PF00583 Acetyltransferase (GNAT) family AciPR4_3589 PF00873 AcrB/AcrD/AcrF family AciPR4_3590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AciPR4_3598 PF00005 ABC transporter AciPR4_3599 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AciPR4_3599 PF06165 Glycosyltransferase family 36 AciPR4_3599 PF10091 Putative glucoamylase AciPR4_3604 PF08892 YqcI/YcgG family AciPR4_3605 PF07715 TonB-dependent Receptor Plug Domain AciPR4_3605 PF00593 TonB dependent receptor AciPR4_3606 PF04055 Radical SAM superfamily AciPR4_3606 PF06968 Biotin and Thiamin Synthesis associated domain AciPR4_3611 PF00440 Bacterial regulatory proteins, tetR family AciPR4_3612 PF12833 Helix-turn-helix domain AciPR4_3612 PF07883 Cupin domain AciPR4_3613 PF00106 short chain dehydrogenase AciPR4_3615 PF00440 Bacterial regulatory proteins, tetR family AciPR4_3619 PF04101 Glycosyltransferase family 28 C-terminal domain AciPR4_3623 PF04542 Sigma-70 region 2 AciPR4_3623 PF04545 Sigma-70, region 4 AciPR4_3627 PF04545 Sigma-70, region 4 AciPR4_3627 PF04539 Sigma-70 region 3 AciPR4_3627 PF04542 Sigma-70 region 2 AciPR4_3631 PF10509 Galactokinase galactose-binding signature AciPR4_3631 PF00288 GHMP kinases N terminal domain AciPR4_3631 PF08544 GHMP kinases C terminal AciPR4_3632 PF08220 DeoR-like helix-turn-helix domain AciPR4_3632 PF00455 DeoR C terminal sensor domain AciPR4_3634 PF03009 Glycerophosphoryl diester phosphodiesterase family AciPR4_3637 PF00999 Sodium/hydrogen exchanger family AciPR4_3638 PF01507 Phosphoadenosine phosphosulfate reductase family AciPR4_3639 PF00009 Elongation factor Tu GTP binding domain AciPR4_3640 PF01507 Phosphoadenosine phosphosulfate reductase family AciPR4_3642 PF02625 XdhC and CoxI family AciPR4_3642 PF13478 XdhC Rossmann domain AciPR4_3643 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AciPR4_3644 PF07690 Major Facilitator Superfamily AciPR4_3646 PF01593 Flavin containing amine oxidoreductase AciPR4_3647 PF01593 Flavin containing amine oxidoreductase AciPR4_3648 PF04542 Sigma-70 region 2 AciPR4_3648 PF08281 Sigma-70, region 4 AciPR4_3653 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_3653 PF00563 EAL domain AciPR4_3653 PF03707 Bacterial signalling protein N terminal repeat AciPR4_3653 PF13188 PAS domain AciPR4_3655 PF02687 FtsX-like permease family AciPR4_3655 PF12704 MacB-like periplasmic core domain AciPR4_3658 PF12704 MacB-like periplasmic core domain AciPR4_3658 PF02687 FtsX-like permease family AciPR4_3658 PF00005 ABC transporter AciPR4_3661 PF00535 Glycosyl transferase family 2 AciPR4_3663 PF01134 Glucose inhibited division protein A AciPR4_3668 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AciPR4_3668 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AciPR4_3676 PF00009 Elongation factor Tu GTP binding domain AciPR4_3676 PF03144 Elongation factor Tu domain 2 AciPR4_3676 PF00679 Elongation factor G C-terminus AciPR4_3676 PF06421 GTP-binding protein LepA C-terminus AciPR4_3677 PF05257 CHAP domain AciPR4_3677 PF01476 LysM domain AciPR4_3679 PF00578 AhpC/TSA family AciPR4_3683 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AciPR4_3683 PF00132 Bacterial transferase hexapeptide (six repeats) AciPR4_3684 PF07977 FabA-like domain AciPR4_3690 PF00579 tRNA synthetases class I (W and Y) AciPR4_3694 PF00753 Metallo-beta-lactamase superfamily AciPR4_3696 PF01165 Ribosomal protein S21 AciPR4_3698 PF05199 GMC oxidoreductase AciPR4_3698 PF00732 GMC oxidoreductase AciPR4_3700 PF01757 Acyltransferase family AciPR4_3702 PF00132 Bacterial transferase hexapeptide (six repeats) AciPR4_3707 PF12833 Helix-turn-helix domain AciPR4_3708 PF14602 Hexapeptide repeat of succinyl-transferase AciPR4_3708 PF12464 Maltose acetyltransferase AciPR4_3709 PF00561 alpha/beta hydrolase fold AciPR4_3710 PF17761 DUF1016 N-terminal domain AciPR4_3710 PF06250 YhcG PDDEXK nuclease domain AciPR4_3712 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AciPR4_3719 PF07992 Pyridine nucleotide-disulphide oxidoreductase AciPR4_3720 PF03466 LysR substrate binding domain AciPR4_3720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AciPR4_3721 PF00962 Adenosine/AMP deaminase AciPR4_3722 PF01042 Endoribonuclease L-PSP AciPR4_3723 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AciPR4_3725 PF03466 LysR substrate binding domain AciPR4_3725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AciPR4_3726 PF00561 alpha/beta hydrolase fold AciPR4_3729 PF00174 Oxidoreductase molybdopterin binding domain AciPR4_3730 PF01209 ubiE/COQ5 methyltransferase family AciPR4_3733 PF00535 Glycosyl transferase family 2 AciPR4_3734 PF01370 NAD dependent epimerase/dehydratase family AciPR4_3735 PF06441 Epoxide hydrolase N terminus AciPR4_3738 PF02245 Methylpurine-DNA glycosylase (MPG) AciPR4_3739 PF03167 Uracil DNA glycosylase superfamily AciPR4_3743 PF02195 ParB-like nuclease domain AciPR4_3743 PF17762 HTH domain found in ParB protein AciPR4_3752 PF13361 UvrD-like helicase C-terminal domain AciPR4_3752 PF00580 UvrD/REP helicase N-terminal domain AciPR4_3754 PF00899 ThiF family AciPR4_3756 PF00149 Calcineurin-like phosphoesterase AciPR4_3758 PF07057 DNA helicase TraI AciPR4_3758 PF18340 DNA relaxase TraI 2B/2B-like domain AciPR4_3758 PF18272 single-stranded DNA binding TraI N-terminal subdomain AciPR4_3758 PF08751 TrwC relaxase AciPR4_3764 PF00437 Type II/IV secretion system protein AciPR4_3777 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AciPR4_3777 PF03466 LysR substrate binding domain AciPR4_3783 PF00665 Integrase core domain AciPR4_3783 PF13936 Helix-turn-helix domain AciPR4_3785 PF00762 Ferrochelatase AciPR4_3786 PF01208 Uroporphyrinogen decarboxylase (URO-D) AciPR4_3787 PF04362 Bacterial Fe(2+) trafficking AciPR4_3788 PF00575 S1 RNA binding domain AciPR4_3788 PF00773 RNB domain AciPR4_3788 PF08461 Ribonuclease R winged-helix domain AciPR4_3788 PF08206 Ribonuclease B OB domain AciPR4_3788 PF17876 Cold shock domain AciPR4_3789 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AciPR4_3789 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AciPR4_3791 PF00535 Glycosyl transferase family 2 AciPR4_3792 PF11798 IMS family HHH motif AciPR4_3792 PF11799 impB/mucB/samB family C-terminal domain AciPR4_3792 PF00817 impB/mucB/samB family AciPR4_3793 PF01757 Acyltransferase family AciPR4_3796 PF00326 Prolyl oligopeptidase family AciPR4_3796 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AciPR4_3797 PF00588 SpoU rRNA Methylase family AciPR4_3799 PF10410 DnaB-helicase binding domain of primase AciPR4_3799 PF08275 DNA primase catalytic core, N-terminal domain AciPR4_3799 PF01807 CHC2 zinc finger AciPR4_3802 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AciPR4_3803 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AciPR4_3804 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AciPR4_3807 PF03707 Bacterial signalling protein N terminal repeat AciPR4_3807 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_3807 PF00563 EAL domain AciPR4_3808 PF00692 dUTPase AciPR4_3809 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AciPR4_3809 PF00586 AIR synthase related protein, N-terminal domain AciPR4_3809 PF02769 AIR synthase related protein, C-terminal domain AciPR4_3810 PF08780 Nucleotidyltransferase substrate binding protein like AciPR4_3811 PF00156 Phosphoribosyl transferase domain AciPR4_3815 PF02843 Phosphoribosylglycinamide synthetase, C domain AciPR4_3815 PF02844 Phosphoribosylglycinamide synthetase, N domain AciPR4_3815 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AciPR4_3816 PF01566 Natural resistance-associated macrophage protein AciPR4_3819 PF01042 Endoribonuclease L-PSP AciPR4_3821 PF00694 Aconitase C-terminal domain AciPR4_3821 PF00330 Aconitase family (aconitate hydratase) AciPR4_3825 PF01494 FAD binding domain AciPR4_3827 PF00440 Bacterial regulatory proteins, tetR family AciPR4_3827 PF08359 YsiA-like protein, C-terminal region AciPR4_3829 PF01625 Peptide methionine sulfoxide reductase AciPR4_3830 PF00144 Beta-lactamase AciPR4_3831 PF13580 SIS domain AciPR4_3833 PF01055 Glycosyl hydrolases family 31 AciPR4_3833 PF13802 Galactose mutarotase-like AciPR4_3835 PF01229 Glycosyl hydrolases family 39 AciPR4_3837 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AciPR4_3837 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AciPR4_3841 PF00561 alpha/beta hydrolase fold AciPR4_3847 PF01479 S4 domain AciPR4_3847 PF00163 Ribosomal protein S4/S9 N-terminal domain AciPR4_3851 PF05036 Sporulation related domain AciPR4_3851 PF03330 Lytic transglycolase AciPR4_3852 PF00072 Response regulator receiver domain AciPR4_3852 PF00196 Bacterial regulatory proteins, luxR family AciPR4_3853 PF07730 Histidine kinase AciPR4_3853 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_3855 PF00005 ABC transporter AciPR4_3858 PF00291 Pyridoxal-phosphate dependent enzyme AciPR4_3858 PF13291 ACT domain AciPR4_3860 PF07690 Major Facilitator Superfamily AciPR4_3861 PF02153 Prephenate dehydrogenase AciPR4_3862 PF01738 Dienelactone hydrolase family AciPR4_3863 PF18152 DAHP synthase ferredoxin-like domain AciPR4_3863 PF00793 DAHP synthetase I family AciPR4_3865 PF00290 Tryptophan synthase alpha chain AciPR4_3866 PF00291 Pyridoxal-phosphate dependent enzyme AciPR4_3868 PF08281 Sigma-70, region 4 AciPR4_3868 PF04542 Sigma-70 region 2 AciPR4_3869 PF00149 Calcineurin-like phosphoesterase AciPR4_3870 PF00034 Cytochrome c AciPR4_3875 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AciPR4_3876 PF00218 Indole-3-glycerol phosphate synthase AciPR4_3878 PF00072 Response regulator receiver domain AciPR4_3878 PF00486 Transcriptional regulatory protein, C terminal AciPR4_3879 PF05198 Translation initiation factor IF-3, N-terminal domain AciPR4_3879 PF00707 Translation initiation factor IF-3, C-terminal domain AciPR4_3882 PF01520 N-acetylmuramoyl-L-alanine amidase AciPR4_3883 PF02272 DHHA1 domain AciPR4_3883 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AciPR4_3883 PF01411 tRNA synthetases class II (A) AciPR4_3884 PF17151 Periplasmic sensor domain AciPR4_3884 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_3887 PF02631 RecX family AciPR4_3894 PF00521 DNA gyrase/topoisomerase IV, subunit A AciPR4_3894 PF03989 DNA gyrase C-terminal domain, beta-propeller AciPR4_3896 PF08241 Methyltransferase domain AciPR4_3899 PF00005 ABC transporter AciPR4_3899 PF02687 FtsX-like permease family AciPR4_3899 PF12704 MacB-like periplasmic core domain AciPR4_3906 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AciPR4_3906 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AciPR4_3907 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AciPR4_3907 PF01266 FAD dependent oxidoreductase AciPR4_3908 PF00230 Major intrinsic protein AciPR4_3909 PF00255 Glutathione peroxidase AciPR4_3911 PF00313 'Cold-shock' DNA-binding domain AciPR4_3912 PF04337 Protein of unknown function, DUF480 AciPR4_3916 PF01850 PIN domain AciPR4_3918 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AciPR4_3918 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AciPR4_3922 PF00005 ABC transporter AciPR4_3922 PF02687 FtsX-like permease family AciPR4_3922 PF12704 MacB-like periplasmic core domain AciPR4_3924 PF05951 Bacterial protein of unknown function (DUF882) AciPR4_3928 PF10672 S-adenosylmethionine-dependent methyltransferase AciPR4_3928 PF17785 PUA-like domain AciPR4_3934 PF08240 Alcohol dehydrogenase GroES-like domain AciPR4_3934 PF13823 Alcohol dehydrogenase GroES-associated AciPR4_3934 PF00107 Zinc-binding dehydrogenase AciPR4_3937 PF06628 Catalase-related immune-responsive AciPR4_3937 PF18011 C-terminal domain found in long catalases AciPR4_3937 PF00199 Catalase AciPR4_3939 PF00550 Phosphopantetheine attachment site AciPR4_3939 PF08659 KR domain AciPR4_3939 PF02801 Beta-ketoacyl synthase, C-terminal domain AciPR4_3939 PF00109 Beta-ketoacyl synthase, N-terminal domain AciPR4_3939 PF16197 Ketoacyl-synthetase C-terminal extension AciPR4_3939 PF08240 Alcohol dehydrogenase GroES-like domain AciPR4_3939 PF00698 Acyl transferase domain AciPR4_3939 PF14765 Polyketide synthase dehydratase AciPR4_3941 PF03948 Ribosomal protein L9, C-terminal domain AciPR4_3941 PF01281 Ribosomal protein L9, N-terminal domain AciPR4_3943 PF01084 Ribosomal protein S18 AciPR4_3944 PF01250 Ribosomal protein S6 AciPR4_3945 PF01195 Peptidyl-tRNA hydrolase AciPR4_3946 PF01386 Ribosomal L25p family AciPR4_3946 PF14693 Ribosomal protein TL5, C-terminal domain AciPR4_3947 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AciPR4_3947 PF14572 Phosphoribosyl synthetase-associated domain AciPR4_3948 PF00288 GHMP kinases N terminal domain AciPR4_3948 PF08544 GHMP kinases C terminal AciPR4_3950 PF00011 Hsp20/alpha crystallin family AciPR4_3951 PF17871 AAA lid domain AciPR4_3951 PF00004 ATPase family associated with various cellular activities (AAA) AciPR4_3951 PF02861 Clp amino terminal domain, pathogenicity island component AciPR4_3951 PF10431 C-terminal, D2-small domain, of ClpB protein AciPR4_3951 PF07724 AAA domain (Cdc48 subfamily) AciPR4_3952 PF16363 GDP-mannose 4,6 dehydratase AciPR4_3957 PF05175 Methyltransferase small domain AciPR4_3957 PF17827 PrmC N-terminal domain AciPR4_3958 PF03462 PCRF domain AciPR4_3958 PF00472 RF-1 domain AciPR4_3962 PF00106 short chain dehydrogenase AciPR4_3963 PF04675 DNA ligase N terminus AciPR4_3963 PF01068 ATP dependent DNA ligase domain AciPR4_3963 PF04679 ATP dependent DNA ligase C terminal region AciPR4_3964 PF13520 Amino acid permease AciPR4_3965 PF00593 TonB dependent receptor AciPR4_3965 PF07715 TonB-dependent Receptor Plug Domain AciPR4_3966 PF00248 Aldo/keto reductase family AciPR4_3968 PF01545 Cation efflux family AciPR4_3968 PF16916 Dimerisation domain of Zinc Transporter AciPR4_3969 PF00111 2Fe-2S iron-sulfur cluster binding domain AciPR4_3973 PF13936 Helix-turn-helix domain AciPR4_3973 PF00665 Integrase core domain AciPR4_3978 PF04055 Radical SAM superfamily AciPR4_3978 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AciPR4_3983 PF01765 Ribosome recycling factor AciPR4_3987 PF01568 Molydopterin dinucleotide binding domain AciPR4_3987 PF00384 Molybdopterin oxidoreductase AciPR4_3987 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AciPR4_3988 PF01103 Surface antigen AciPR4_3988 PF07244 Surface antigen variable number repeat AciPR4_3990 PF04453 LPS transport system D AciPR4_3990 PF03968 OstA-like protein AciPR4_3992 PF00639 PPIC-type PPIASE domain AciPR4_3992 PF09312 SurA N-terminal domain AciPR4_3998 PF02472 Biopolymer transport protein ExbD/TolR AciPR4_3999 PF02472 Biopolymer transport protein ExbD/TolR AciPR4_4000 PF01618 MotA/TolQ/ExbB proton channel family AciPR4_4007 PF02618 YceG-like family AciPR4_4008 PF03652 Holliday junction resolvase AciPR4_4009 PF03449 Transcription elongation factor, N-terminal AciPR4_4009 PF01272 Transcription elongation factor, GreA/GreB, C-term AciPR4_4012 PF01263 Aldose 1-epimerase AciPR4_4013 PF02545 Maf-like protein AciPR4_4017 PF00753 Metallo-beta-lactamase superfamily AciPR4_4019 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AciPR4_4021 PF01593 Flavin containing amine oxidoreductase AciPR4_4023 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AciPR4_4026 PF04055 Radical SAM superfamily AciPR4_4028 PF04055 Radical SAM superfamily AciPR4_4031 PF01702 Queuine tRNA-ribosyltransferase AciPR4_4034 PF02699 Preprotein translocase subunit AciPR4_4035 PF07549 SecD/SecF GG Motif AciPR4_4035 PF02355 Protein export membrane protein AciPR4_4036 PF02355 Protein export membrane protein AciPR4_4036 PF07549 SecD/SecF GG Motif AciPR4_4039 PF00115 Cytochrome C and Quinol oxidase polypeptide I AciPR4_4040 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AciPR4_4040 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AciPR4_4047 PF00037 4Fe-4S binding domain AciPR4_4047 PF13247 4Fe-4S dicluster domain AciPR4_4048 PF02085 Class III cytochrome C family AciPR4_4049 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AciPR4_4054 PF00730 HhH-GPD superfamily base excision DNA repair protein AciPR4_4056 PF02687 FtsX-like permease family AciPR4_4056 PF00005 ABC transporter AciPR4_4056 PF12704 MacB-like periplasmic core domain AciPR4_4057 PF12704 MacB-like periplasmic core domain AciPR4_4057 PF02687 FtsX-like permease family AciPR4_4057 PF00005 ABC transporter AciPR4_4058 PF12706 Beta-lactamase superfamily domain AciPR4_4066 PF00722 Glycosyl hydrolases family 16 AciPR4_4069 PF00403 Heavy-metal-associated domain AciPR4_4069 PF07992 Pyridine nucleotide-disulphide oxidoreductase AciPR4_4069 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AciPR4_4070 PF00464 Serine hydroxymethyltransferase AciPR4_4073 PF03060 Nitronate monooxygenase AciPR4_4076 PF01168 Alanine racemase, N-terminal domain AciPR4_4076 PF00842 Alanine racemase, C-terminal domain AciPR4_4077 PF08279 HTH domain AciPR4_4077 PF13280 WYL domain AciPR4_4080 PF03796 DnaB-like helicase C terminal domain AciPR4_4080 PF00772 DnaB-like helicase N terminal domain AciPR4_4082 PF13932 GidA associated domain AciPR4_4082 PF01134 Glucose inhibited division protein A AciPR4_4083 PF01850 PIN domain AciPR4_4085 PF00106 short chain dehydrogenase AciPR4_4088 PF00892 EamA-like transporter family AciPR4_4090 PF00593 TonB dependent receptor AciPR4_4091 PF01018 GTP1/OBG AciPR4_4091 PF01926 50S ribosome-binding GTPase AciPR4_4092 PF01638 HxlR-like helix-turn-helix AciPR4_4096 PF01467 Cytidylyltransferase-like AciPR4_4097 PF02627 Carboxymuconolactone decarboxylase family AciPR4_4098 PF01546 Peptidase family M20/M25/M40 AciPR4_4098 PF07687 Peptidase dimerisation domain AciPR4_4104 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AciPR4_4104 PF03466 LysR substrate binding domain AciPR4_4105 PF01301 Glycosyl hydrolases family 35 AciPR4_4107 PF00593 TonB dependent receptor AciPR4_4108 PF02590 Predicted SPOUT methyltransferase AciPR4_4109 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AciPR4_4109 PF12557 Cob(I)alamin adenosyltransferase N terminal AciPR4_4111 PF00067 Cytochrome P450 AciPR4_4112 PF00067 Cytochrome P450 AciPR4_4114 PF07690 Major Facilitator Superfamily AciPR4_4119 PF00561 alpha/beta hydrolase fold AciPR4_4122 PF00145 C-5 cytosine-specific DNA methylase AciPR4_4122 PF12728 Helix-turn-helix domain AciPR4_4125 PF01039 Carboxyl transferase domain AciPR4_4125 PF17848 Acetyl-coA carboxylase zinc finger domain AciPR4_4130 PF04072 Leucine carboxyl methyltransferase AciPR4_4132 PF02875 Mur ligase family, glutamate ligase domain AciPR4_4132 PF08245 Mur ligase middle domain AciPR4_4134 PF00106 short chain dehydrogenase AciPR4_4137 PF00849 RNA pseudouridylate synthase AciPR4_4143 PF03466 LysR substrate binding domain AciPR4_4143 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AciPR4_4150 PF16363 GDP-mannose 4,6 dehydratase AciPR4_4152 PF07722 Peptidase C26 AciPR4_4153 PF02527 rRNA small subunit methyltransferase G AciPR4_4154 PF13614 AAA domain AciPR4_4155 PF02195 ParB-like nuclease domain AciPR4_4155 PF17762 HTH domain found in ParB protein AciPR4_4161 PF00005 ABC transporter AciPR4_4161 PF02687 FtsX-like permease family AciPR4_4161 PF12704 MacB-like periplasmic core domain AciPR4_4162 PF00216 Bacterial DNA-binding protein AciPR4_4164 PF01757 Acyltransferase family AciPR4_4165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AciPR4_4165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AciPR4_4166 PF03466 LysR substrate binding domain AciPR4_4166 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AciPR4_4167 PF01494 FAD binding domain AciPR4_4168 PF01494 FAD binding domain AciPR4_4169 PF00440 Bacterial regulatory proteins, tetR family AciPR4_4169 PF02909 Tetracyclin repressor-like, C-terminal domain AciPR4_4173 PF00657 GDSL-like Lipase/Acylhydrolase AciPR4_4175 PF01894 Uncharacterised protein family UPF0047 AciPR4_4177 PF11127 Protein of unknown function (DUF2892) AciPR4_4177 PF00581 Rhodanese-like domain AciPR4_4179 PF00753 Metallo-beta-lactamase superfamily AciPR4_4182 PF01381 Helix-turn-helix AciPR4_4183 PF17755 UvrA DNA-binding domain AciPR4_4184 PF06745 KaiC AciPR4_4185 PF00989 PAS fold AciPR4_4185 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_4185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_4188 PF08281 Sigma-70, region 4 AciPR4_4188 PF04542 Sigma-70 region 2 AciPR4_4194 PF05230 MASE2 domain AciPR4_4194 PF00990 Diguanylate cyclase, GGDEF domain AciPR4_4195 PF00331 Glycosyl hydrolase family 10 AciPR4_4195 PF06452 Carbohydrate family 9 binding domain-like AciPR4_4195 PF02018 Carbohydrate binding domain AciPR4_4196 PF00989 PAS fold AciPR4_4196 PF08447 PAS fold AciPR4_4196 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_4196 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_4197 PF00107 Zinc-binding dehydrogenase AciPR4_4197 PF08240 Alcohol dehydrogenase GroES-like domain AciPR4_4199 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AciPR4_4199 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AciPR4_4204 PF03129 Anticodon binding domain AciPR4_4204 PF02824 TGS domain AciPR4_4204 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AciPR4_4204 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AciPR4_4206 PF00155 Aminotransferase class I and II AciPR4_4210 PF00437 Type II/IV secretion system protein AciPR4_4211 PF02558 Ketopantoate reductase PanE/ApbA AciPR4_4211 PF08546 Ketopantoate reductase PanE/ApbA C terminal AciPR4_4215 PF12833 Helix-turn-helix domain AciPR4_4215 PF06719 AraC-type transcriptional regulator N-terminus AciPR4_4216 PF03572 Peptidase family S41 AciPR4_4216 PF00595 PDZ domain AciPR4_4218 PF12704 MacB-like periplasmic core domain AciPR4_4218 PF02687 FtsX-like permease family AciPR4_4220 PF00440 Bacterial regulatory proteins, tetR family AciPR4_4221 PF13229 Right handed beta helix region AciPR4_4221 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AciPR4_4221 PF12708 Pectate lyase superfamily protein AciPR4_4224 PF00712 DNA polymerase III beta subunit, N-terminal domain AciPR4_4224 PF02767 DNA polymerase III beta subunit, central domain AciPR4_4224 PF02768 DNA polymerase III beta subunit, C-terminal domain AciPR4_4232 PF05973 Phage derived protein Gp49-like (DUF891) AciPR4_4234 PF07690 Major Facilitator Superfamily AciPR4_4235 PF01330 RuvA N terminal domain AciPR4_4235 PF07499 RuvA, C-terminal domain AciPR4_4237 PF01204 Trehalase AciPR4_4238 PF00128 Alpha amylase, catalytic domain AciPR4_4239 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AciPR4_4239 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AciPR4_4244 PF00474 Sodium:solute symporter family AciPR4_4246 PF01011 PQQ enzyme repeat AciPR4_4248 PF00083 Sugar (and other) transporter AciPR4_4249 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AciPR4_4249 PF03466 LysR substrate binding domain AciPR4_4250 PF00873 AcrB/AcrD/AcrF family AciPR4_4251 PF00529 HlyD membrane-fusion protein of T1SS AciPR4_4251 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AciPR4_4252 PF02321 Outer membrane efflux protein AciPR4_4253 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AciPR4_4253 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AciPR4_4254 PF00890 FAD binding domain AciPR4_4254 PF02910 Fumarate reductase flavoprotein C-term AciPR4_4255 PF02445 Quinolinate synthetase A protein AciPR4_4256 PF02669 K+-transporting ATPase, c chain AciPR4_4258 PF03814 Potassium-transporting ATPase A subunit AciPR4_4261 PF00072 Response regulator receiver domain AciPR4_4261 PF00486 Transcriptional regulatory protein, C terminal AciPR4_4262 PF02702 Osmosensitive K+ channel His kinase sensor domain AciPR4_4263 PF13493 Domain of unknown function (DUF4118) AciPR4_4263 PF02702 Osmosensitive K+ channel His kinase sensor domain AciPR4_4263 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AciPR4_4263 PF00512 His Kinase A (phospho-acceptor) domain AciPR4_4267 PF00535 Glycosyl transferase family 2 AciPR4_4268 PF16363 GDP-mannose 4,6 dehydratase AciPR4_4274 PF10396 GTP-binding protein TrmE N-terminus AciPR4_4274 PF12631 MnmE helical domain AciPR4_4274 PF01926 50S ribosome-binding GTPase AciPR4_4276 PF14849 YidC periplasmic domain AciPR4_4276 PF02096 60Kd inner membrane protein AciPR4_4277 PF01809 Putative membrane protein insertion efficiency factor AciPR4_4278 PF00825 Ribonuclease P AciPR4_4279 PF00468 Ribosomal protein L34