AciPR4_0001 SM00382 ATPases associated with a variety of cellular activities AciPR4_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain AciPR4_0004 SM00463 Small MutS-related domain AciPR4_0004 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AciPR4_0004 SM00534 ATPase domain of DNA mismatch repair MUTS family AciPR4_0007 SM01004 Delta-aminolevulinic acid dehydratase AciPR4_0025 SM00849 Metallo-beta-lactamase superfamily AciPR4_0039 SM00835 Cupin AciPR4_0061 SM00450 Rhodanese Homology Domain AciPR4_0080 SM01001 AIR carboxylase AciPR4_0106 SM00984 UDP binding domain AciPR4_0110 SM00421 helix_turn_helix, Lux Regulon AciPR4_0110 SM00448 cheY-homologous receiver domain AciPR4_0111 SM00387 Histidine kinase-like ATPases AciPR4_0123 SM00857 Resolvase, N terminal domain AciPR4_0125 SM00530 Helix-turn-helix XRE-family like proteins AciPR4_0138 SM00267 diguanylate cyclase AciPR4_0139 SM00271 DnaJ molecular chaperone homology domain AciPR4_0144 SM00382 ATPases associated with a variety of cellular activities AciPR4_0144 SM01086 C-terminal, D2-small domain, of ClpB protein AciPR4_0148 SM00060 Fibronectin type 3 domain AciPR4_0149 SM00530 Helix-turn-helix XRE-family like proteins AciPR4_0156 SM00478 endonuclease III AciPR4_0161 SM00478 endonuclease III AciPR4_0164 SM00953 AciPR4_0164 AciPR4_0189 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AciPR4_0200 SM00710 Parallel beta-helix repeats AciPR4_0206 SM00267 diguanylate cyclase AciPR4_0209 SM00357 Cold shock protein domain AciPR4_0211 SM00052 Putative diguanylate phosphodiesterase AciPR4_0211 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AciPR4_0211 SM00091 PAS domain AciPR4_0211 SM00267 diguanylate cyclase AciPR4_0226 SM00564 beta-propeller repeat AciPR4_0253 SM01235 AciPR4_0253 AciPR4_0264 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AciPR4_0264 SM00292 breast cancer carboxy-terminal domain AciPR4_0264 SM00532 Ligase N family AciPR4_0269 SM00852 Probable molybdopterin binding domain AciPR4_0282 SM00422 helix_turn_helix, mercury resistance AciPR4_0286 SM00267 diguanylate cyclase AciPR4_0288 SM00825 Beta-ketoacyl synthase AciPR4_0294 SM00953 AciPR4_0294 AciPR4_0300 SM00387 Histidine kinase-like ATPases AciPR4_0300 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_0301 SM00448 cheY-homologous receiver domain AciPR4_0302 SM00091 PAS domain AciPR4_0302 SM00387 Histidine kinase-like ATPases AciPR4_0302 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_0302 SM00448 cheY-homologous receiver domain AciPR4_0310 SM00052 Putative diguanylate phosphodiesterase AciPR4_0310 SM00091 PAS domain AciPR4_0310 SM00267 diguanylate cyclase AciPR4_0318 SM00267 diguanylate cyclase AciPR4_0325 SM00871 Bacterial transcription activator, effector binding domain AciPR4_0338 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AciPR4_0340 SM00448 cheY-homologous receiver domain AciPR4_0341 SM00841 Elongation factor P, C-terminal AciPR4_0341 SM01185 AciPR4_0341 AciPR4_0342 SM00758 AciPR4_0342 AciPR4_0342 SM01217 AciPR4_0342 AciPR4_0354 SM00100 Cyclic nucleotide-monophosphate binding domain AciPR4_0356 SM00822 AciPR4_0356 AciPR4_0363 SM00873 B3/4 domain AciPR4_0363 SM00874 tRNA synthetase B5 domain AciPR4_0363 SM00896 Ferredoxin-fold anticodon binding domain AciPR4_0369 SM00327 von Willebrand factor (vWF) type A domain AciPR4_0370 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AciPR4_0370 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AciPR4_0373 SM00327 von Willebrand factor (vWF) type A domain AciPR4_0374 SM00363 S4 RNA-binding domain AciPR4_0389 SM00663 RNA polymerase I subunit A N-terminus AciPR4_0392 SM01321 AciPR4_0392 AciPR4_0394 SM00448 cheY-homologous receiver domain AciPR4_0403 SM00636 AciPR4_0403 AciPR4_0404 SM00636 AciPR4_0404 AciPR4_0408 SM00758 AciPR4_0408 AciPR4_0408 SM01217 AciPR4_0408 AciPR4_0413 SM00825 Beta-ketoacyl synthase AciPR4_0415 SM00642 Alpha-amylase domain AciPR4_0416 SM00564 beta-propeller repeat AciPR4_0423 SM00636 AciPR4_0423 AciPR4_0426 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AciPR4_0426 SM00954 Region found in RelA / SpoT proteins AciPR4_0427 SM00382 ATPases associated with a variety of cellular activities AciPR4_0447 SM00567 E-Z type HEAT repeats AciPR4_0465 SM00052 Putative diguanylate phosphodiesterase AciPR4_0465 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AciPR4_0465 SM00091 PAS domain AciPR4_0465 SM00267 diguanylate cyclase AciPR4_0472 SM00729 Elongator protein 3, MiaB family, Radical SAM AciPR4_0503 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AciPR4_0509 SM00861 Transketolase, pyrimidine binding domain AciPR4_0512 SM00822 AciPR4_0512 AciPR4_0514 SM01350 AciPR4_0514 AciPR4_0519 SM00849 Metallo-beta-lactamase superfamily AciPR4_0541 SM00487 DEAD-like helicases superfamily AciPR4_0541 SM00490 helicase superfamily c-terminal domain AciPR4_0541 SM00982 AciPR4_0541 AciPR4_0541 SM01058 CarD-like/TRCF domain AciPR4_0542 SM00845 GatB domain AciPR4_0545 SM00834 Putative regulatory protein AciPR4_0563 SM00448 cheY-homologous receiver domain AciPR4_0568 SM00530 Helix-turn-helix XRE-family like proteins AciPR4_0575 SM00382 ATPases associated with a variety of cellular activities AciPR4_0576 SM00382 ATPases associated with a variety of cellular activities AciPR4_0584 SM00382 ATPases associated with a variety of cellular activities AciPR4_0590 SM00028 Tetratricopeptide repeats AciPR4_0595 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AciPR4_0595 SM00245 tail specific protease AciPR4_0597 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AciPR4_0604 SM00740 AciPR4_0604 AciPR4_0617 SM00052 Putative diguanylate phosphodiesterase AciPR4_0617 SM00091 PAS domain AciPR4_0617 SM00267 diguanylate cyclase AciPR4_0617 SM00448 cheY-homologous receiver domain AciPR4_0620 SM00853 MutL C terminal dimerisation domain AciPR4_0620 SM01340 AciPR4_0620 AciPR4_0623 SM00357 Cold shock protein domain AciPR4_0629 SM00829 Enoylreductase AciPR4_0633 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_0634 SM00108 Bulb-type mannose-specific lectin AciPR4_0636 SM00861 Transketolase, pyrimidine binding domain AciPR4_0645 SM00448 cheY-homologous receiver domain AciPR4_0646 SM00387 Histidine kinase-like ATPases AciPR4_0646 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_0646 SM00448 cheY-homologous receiver domain AciPR4_0650 SM00563 Phosphate acyltransferases AciPR4_0656 SM00530 Helix-turn-helix XRE-family like proteins AciPR4_0658 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AciPR4_0660 SM00382 ATPases associated with a variety of cellular activities AciPR4_0660 SM00487 DEAD-like helicases superfamily AciPR4_0660 SM00490 helicase superfamily c-terminal domain AciPR4_0661 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AciPR4_0661 SM01232 AciPR4_0661 AciPR4_0676 SM00382 ATPases associated with a variety of cellular activities AciPR4_0679 SM00530 Helix-turn-helix XRE-family like proteins AciPR4_0680 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AciPR4_0681 SM00267 diguanylate cyclase AciPR4_0689 SM00822 AciPR4_0689 AciPR4_0691 SM00382 ATPases associated with a variety of cellular activities AciPR4_0704 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AciPR4_0704 SM00245 tail specific protease AciPR4_0706 SM00904 Riboflavin kinase AciPR4_0717 SM00563 Phosphate acyltransferases AciPR4_0719 SM00244 prohibitin homologues AciPR4_0722 SM00028 Tetratricopeptide repeats AciPR4_0725 SM00829 Enoylreductase AciPR4_0727 SM00870 AciPR4_0727 AciPR4_0747 SM00822 AciPR4_0747 AciPR4_0749 SM00947 Carbonic anhydrase AciPR4_0752 SM00947 Carbonic anhydrase AciPR4_0756 SM00100 Cyclic nucleotide-monophosphate binding domain AciPR4_0756 SM00419 helix_turn_helix, cAMP Regulatory protein AciPR4_0760 SM00382 ATPases associated with a variety of cellular activities AciPR4_0765 SM00506 Appr-1"-p processing enzyme AciPR4_0767 SM00363 S4 RNA-binding domain AciPR4_0775 SM00487 DEAD-like helicases superfamily AciPR4_0775 SM00490 helicase superfamily c-terminal domain AciPR4_0780 SM00382 ATPases associated with a variety of cellular activities AciPR4_0780 SM00448 cheY-homologous receiver domain AciPR4_0782 SM00704 CDGSH-type zinc finger. Function unknown. AciPR4_0783 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AciPR4_0796 SM00271 DnaJ molecular chaperone homology domain AciPR4_0800 SM00382 ATPases associated with a variety of cellular activities AciPR4_0802 SM00357 Cold shock protein domain AciPR4_0802 SM00382 ATPases associated with a variety of cellular activities AciPR4_0802 SM00959 Rho termination factor, N-terminal domain AciPR4_0803 SM00052 Putative diguanylate phosphodiesterase AciPR4_0813 SM00354 helix_turn _helix lactose operon repressor AciPR4_0818 SM01217 AciPR4_0818 AciPR4_0820 SM01149 AciPR4_0820 AciPR4_0822 SM00387 Histidine kinase-like ATPases AciPR4_0823 SM00421 helix_turn_helix, Lux Regulon AciPR4_0823 SM00448 cheY-homologous receiver domain AciPR4_0831 SM00382 ATPases associated with a variety of cellular activities AciPR4_0835 SM00448 cheY-homologous receiver domain AciPR4_0836 SM00421 helix_turn_helix, Lux Regulon AciPR4_0836 SM00448 cheY-homologous receiver domain AciPR4_0839 SM00382 ATPases associated with a variety of cellular activities AciPR4_0839 SM00843 AciPR4_0839 AciPR4_0846 SM00849 Metallo-beta-lactamase superfamily AciPR4_0847 SM00327 von Willebrand factor (vWF) type A domain AciPR4_0849 SM01350 AciPR4_0849 AciPR4_0853 SM01130 AciPR4_0853 AciPR4_0860 SM00859 Semialdehyde dehydrogenase, NAD binding domain AciPR4_0869 SM00710 Parallel beta-helix repeats AciPR4_0873 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AciPR4_0873 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AciPR4_0874 SM00091 PAS domain AciPR4_0874 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AciPR4_0874 SM00387 Histidine kinase-like ATPases AciPR4_0874 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_0875 SM00382 ATPases associated with a variety of cellular activities AciPR4_0875 SM00448 cheY-homologous receiver domain AciPR4_0876 SM00382 ATPases associated with a variety of cellular activities AciPR4_0877 SM01091 Transporter associated domain AciPR4_0889 SM01011 Aminopeptidase P, N-terminal domain AciPR4_0895 SM00756 AciPR4_0895 AciPR4_0900 SM01219 AciPR4_0900 AciPR4_0921 SM00842 Cell division protein FtsA AciPR4_0923 SM00864 Tubulin/FtsZ family, GTPase domain AciPR4_0923 SM00865 Tubulin/FtsZ family, C-terminal domain AciPR4_0928 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_0931 SM00382 ATPases associated with a variety of cellular activities AciPR4_0936 SM00909 Sporulation and spore germination AciPR4_0940 SM00327 von Willebrand factor (vWF) type A domain AciPR4_0941 SM00327 von Willebrand factor (vWF) type A domain AciPR4_0946 SM00859 Semialdehyde dehydrogenase, NAD binding domain AciPR4_0954 SM00798 AICARFT/IMPCHase bienzyme AciPR4_0954 SM00851 MGS-like domain AciPR4_0955 SM00028 Tetratricopeptide repeats AciPR4_0956 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AciPR4_0959 SM00636 AciPR4_0959 AciPR4_0961 SM00421 helix_turn_helix, Lux Regulon AciPR4_0962 SM00448 cheY-homologous receiver domain AciPR4_0963 SM00100 Cyclic nucleotide-monophosphate binding domain AciPR4_0963 SM00387 Histidine kinase-like ATPases AciPR4_0965 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_0966 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_0967 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_0968 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_0969 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_0980 SM00382 ATPases associated with a variety of cellular activities AciPR4_0980 SM00464 Found in ATP-dependent protease La (LON) AciPR4_0981 SM00382 ATPases associated with a variety of cellular activities AciPR4_0981 SM00994 ClpX C4-type zinc finger AciPR4_0981 SM01086 C-terminal, D2-small domain, of ClpB protein AciPR4_0985 SM00986 Uracil DNA glycosylase superfamily AciPR4_0985 SM00987 UreE urease accessory protein, C-terminal domain AciPR4_0987 SM00382 ATPases associated with a variety of cellular activities AciPR4_0987 SM01086 C-terminal, D2-small domain, of ClpB protein AciPR4_0988 SM00382 ATPases associated with a variety of cellular activities AciPR4_0990 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AciPR4_0991 SM00938 Nitrogen regulatory protein P-II AciPR4_1000 SM01329 AciPR4_1000 AciPR4_1031 SM00347 helix_turn_helix multiple antibiotic resistance protein AciPR4_1038 SM00448 cheY-homologous receiver domain AciPR4_1038 SM00862 Transcriptional regulatory protein, C terminal AciPR4_1039 SM00387 Histidine kinase-like ATPases AciPR4_1039 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_1060 SM00849 Metallo-beta-lactamase superfamily AciPR4_1062 SM00829 Enoylreductase AciPR4_1069 SM00382 ATPases associated with a variety of cellular activities AciPR4_1074 SM00028 Tetratricopeptide repeats AciPR4_1074 SM00220 Serine/Threonine protein kinases, catalytic domain AciPR4_1076 SM00331 Sigma factor PP2C-like phosphatases AciPR4_1076 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AciPR4_1089 SM00382 ATPases associated with a variety of cellular activities AciPR4_1089 SM01086 C-terminal, D2-small domain, of ClpB protein AciPR4_1092 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AciPR4_1106 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AciPR4_1106 SM00534 ATPase domain of DNA mismatch repair MUTS family AciPR4_1115 SM00478 endonuclease III AciPR4_1125 SM00387 Histidine kinase-like ATPases AciPR4_1126 SM00829 Enoylreductase AciPR4_1136 SM01329 AciPR4_1136 AciPR4_1148 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AciPR4_1148 SM00091 PAS domain AciPR4_1148 SM00387 Histidine kinase-like ATPases AciPR4_1148 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_1151 SM00861 Transketolase, pyrimidine binding domain AciPR4_1154 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AciPR4_1172 SM00382 ATPases associated with a variety of cellular activities AciPR4_1172 SM00464 Found in ATP-dependent protease La (LON) AciPR4_1175 SM00327 von Willebrand factor (vWF) type A domain AciPR4_1180 SM00046 Diacylglycerol kinase catalytic domain (presumed) AciPR4_1182 SM00382 ATPases associated with a variety of cellular activities AciPR4_1185 SM00382 ATPases associated with a variety of cellular activities AciPR4_1196 SM00636 AciPR4_1196 AciPR4_1202 SM00422 helix_turn_helix, mercury resistance AciPR4_1203 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_1210 SM00100 Cyclic nucleotide-monophosphate binding domain AciPR4_1210 SM00419 helix_turn_helix, cAMP Regulatory protein AciPR4_1211 SM00829 Enoylreductase AciPR4_1219 SM00421 helix_turn_helix, Lux Regulon AciPR4_1219 SM00448 cheY-homologous receiver domain AciPR4_1220 SM00387 Histidine kinase-like ATPases AciPR4_1225 SM00100 Cyclic nucleotide-monophosphate binding domain AciPR4_1225 SM00419 helix_turn_helix, cAMP Regulatory protein AciPR4_1240 SM00421 helix_turn_helix, Lux Regulon AciPR4_1240 SM00448 cheY-homologous receiver domain AciPR4_1250 SM00841 Elongation factor P, C-terminal AciPR4_1250 SM01185 AciPR4_1250 AciPR4_1254 SM00829 Enoylreductase AciPR4_1261 SM00363 S4 RNA-binding domain AciPR4_1265 SM00267 diguanylate cyclase AciPR4_1268 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AciPR4_1268 SM00475 5'-3' exonuclease AciPR4_1268 SM00482 DNA polymerase A domain AciPR4_1269 SM00267 diguanylate cyclase AciPR4_1275 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AciPR4_1289 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AciPR4_1289 SM00387 Histidine kinase-like ATPases AciPR4_1289 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_1291 SM00382 ATPases associated with a variety of cellular activities AciPR4_1298 SM00836 DALR anticodon binding domain AciPR4_1302 SM00382 ATPases associated with a variety of cellular activities AciPR4_1306 SM00382 ATPases associated with a variety of cellular activities AciPR4_1308 SM00072 Guanylate kinase homologues. AciPR4_1309 SM01409 AciPR4_1309 AciPR4_1310 SM00986 Uracil DNA glycosylase superfamily AciPR4_1310 SM00987 UreE urease accessory protein, C-terminal domain AciPR4_1311 SM00487 DEAD-like helicases superfamily AciPR4_1311 SM00490 helicase superfamily c-terminal domain AciPR4_1312 SM00411 bacterial (prokaryotic) histone like domain AciPR4_1314 SM00421 helix_turn_helix, Lux Regulon AciPR4_1337 SM00944 Pro-kumamolisin, activation domain AciPR4_1351 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AciPR4_1353 SM00382 ATPases associated with a variety of cellular activities AciPR4_1359 SM00054 EF-hand, calcium binding motif AciPR4_1363 SM00248 ankyrin repeats AciPR4_1364 SM00450 Rhodanese Homology Domain AciPR4_1377 SM00944 Pro-kumamolisin, activation domain AciPR4_1385 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_1397 SM00028 Tetratricopeptide repeats AciPR4_1402 SM00836 DALR anticodon binding domain AciPR4_1402 SM01016 Arginyl tRNA synthetase N terminal dom AciPR4_1405 SM00028 Tetratricopeptide repeats AciPR4_1412 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AciPR4_1421 SM00881 CoA binding domain AciPR4_1426 SM00382 ATPases associated with a variety of cellular activities AciPR4_1427 SM00967 RNA 2'-O ribose methyltransferase substrate binding AciPR4_1433 SM00363 S4 RNA-binding domain AciPR4_1441 SM00420 helix_turn_helix, Deoxyribose operon repressor AciPR4_1441 SM01134 AciPR4_1441 AciPR4_1451 SM00382 ATPases associated with a variety of cellular activities AciPR4_1456 SM00529 Helix-turn-helix diphteria tox regulatory element AciPR4_1466 SM00530 Helix-turn-helix XRE-family like proteins AciPR4_1468 SM00346 helix_turn_helix isocitrate lyase regulation AciPR4_1469 SM00822 AciPR4_1469 AciPR4_1469 SM01007 Class II Aldolase and Adducin N-terminal domain AciPR4_1484 SM00327 von Willebrand factor (vWF) type A domain AciPR4_1491 SM00448 cheY-homologous receiver domain AciPR4_1494 SM00028 Tetratricopeptide repeats AciPR4_1494 SM00220 Serine/Threonine protein kinases, catalytic domain AciPR4_1499 SM01192 AciPR4_1499 AciPR4_1499 SM01193 AciPR4_1499 AciPR4_1502 SM00493 AciPR4_1502 AciPR4_1504 SM00382 ATPases associated with a variety of cellular activities AciPR4_1507 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AciPR4_1507 SM00508 Cysteine-rich motif following a subset of SET domains AciPR4_1516 SM01221 AciPR4_1516 AciPR4_1516 SM01222 AciPR4_1516 AciPR4_1526 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain AciPR4_1526 SM00409 Immunoglobulin AciPR4_1534 SM00345 helix_turn_helix gluconate operon transcriptional repressor AciPR4_1534 SM00895 AciPR4_1534 AciPR4_1536 SM00448 cheY-homologous receiver domain AciPR4_1536 SM00862 Transcriptional regulatory protein, C terminal AciPR4_1537 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AciPR4_1537 SM00387 Histidine kinase-like ATPases AciPR4_1537 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_1548 SM00354 helix_turn _helix lactose operon repressor AciPR4_1549 SM00028 Tetratricopeptide repeats AciPR4_1556 SM00448 cheY-homologous receiver domain AciPR4_1556 SM00850 LytTr DNA-binding domain AciPR4_1563 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AciPR4_1583 SM00448 cheY-homologous receiver domain AciPR4_1583 SM00850 LytTr DNA-binding domain AciPR4_1584 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AciPR4_1586 SM00849 Metallo-beta-lactamase superfamily AciPR4_1590 SM00345 helix_turn_helix gluconate operon transcriptional repressor AciPR4_1590 SM00895 AciPR4_1590 AciPR4_1626 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AciPR4_1626 SM00347 helix_turn_helix multiple antibiotic resistance protein AciPR4_1638 SM00829 Enoylreductase AciPR4_1641 SM00944 Pro-kumamolisin, activation domain AciPR4_1642 SM00872 Alpha mannosidase, middle domain AciPR4_1644 SM00028 Tetratricopeptide repeats AciPR4_1644 SM00862 Transcriptional regulatory protein, C terminal AciPR4_1647 SM00812 Alpha-L-fucosidase AciPR4_1651 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AciPR4_1658 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AciPR4_1659 SM00347 helix_turn_helix multiple antibiotic resistance protein AciPR4_1669 SM00382 ATPases associated with a variety of cellular activities AciPR4_1669 SM00962 SRP54-type protein, GTPase domain AciPR4_1669 SM00963 SRP54-type protein, helical bundle domain AciPR4_1673 SM00421 helix_turn_helix, Lux Regulon AciPR4_1674 SM00867 YceI-like domain AciPR4_1687 SM00822 AciPR4_1687 AciPR4_1688 SM01001 AIR carboxylase AciPR4_1699 SM00872 Alpha mannosidase, middle domain AciPR4_1706 SM00062 Bacterial periplasmic substrate-binding proteins AciPR4_1708 SM00813 Alpha-L-arabinofuranosidase C-terminus AciPR4_1709 SM01007 Class II Aldolase and Adducin N-terminal domain AciPR4_1714 SM00710 Parallel beta-helix repeats AciPR4_1744 SM00421 helix_turn_helix, Lux Regulon AciPR4_1744 SM00448 cheY-homologous receiver domain AciPR4_1755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AciPR4_1755 SM00331 Sigma factor PP2C-like phosphatases AciPR4_1761 SM00382 ATPases associated with a variety of cellular activities AciPR4_1782 SM00998 Adenylosuccinate lyase C-terminus AciPR4_1783 SM00116 Domain in cystathionine beta-synthase and other proteins. AciPR4_1794 SM01230 AciPR4_1794 AciPR4_1796 SM00812 Alpha-L-fucosidase AciPR4_1797 SM00135 Low-density lipoprotein-receptor YWTD domain AciPR4_1799 SM00487 DEAD-like helicases superfamily AciPR4_1799 SM00490 helicase superfamily c-terminal domain AciPR4_1806 SM00448 cheY-homologous receiver domain AciPR4_1806 SM00862 Transcriptional regulatory protein, C terminal AciPR4_1808 SM00382 ATPases associated with a variety of cellular activities AciPR4_1815 SM00382 ATPases associated with a variety of cellular activities AciPR4_1842 SM00633 Glycosyl hydrolase family 10 AciPR4_1846 SM01387 AciPR4_1846 AciPR4_1847 SM00316 Ribosomal protein S1-like RNA-binding domain AciPR4_1847 SM00322 K homology RNA-binding domain AciPR4_1854 SM00829 Enoylreductase AciPR4_1861 SM00729 Elongator protein 3, MiaB family, Radical SAM AciPR4_1864 SM00028 Tetratricopeptide repeats AciPR4_1875 SM00729 Elongator protein 3, MiaB family, Radical SAM AciPR4_1878 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AciPR4_1878 SM00331 Sigma factor PP2C-like phosphatases AciPR4_1879 SM01133 AciPR4_1879 AciPR4_1880 SM00986 Uracil DNA glycosylase superfamily AciPR4_1880 SM00987 UreE urease accessory protein, C-terminal domain AciPR4_1887 SM00028 Tetratricopeptide repeats AciPR4_1893 SM01118 AciPR4_1893 AciPR4_1907 SM00849 Metallo-beta-lactamase superfamily AciPR4_1914 SM00382 ATPases associated with a variety of cellular activities AciPR4_1916 SM00530 Helix-turn-helix XRE-family like proteins AciPR4_1921 SM00448 cheY-homologous receiver domain AciPR4_1924 SM00564 beta-propeller repeat AciPR4_1938 SM00481 DNA polymerase alpha chain like domain AciPR4_1944 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AciPR4_1966 SM00710 Parallel beta-helix repeats AciPR4_1971 SM01092 CO dehydrogenase flavoprotein C-terminal domain AciPR4_1972 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AciPR4_1973 SM00341 Helicase and RNase D C-terminal AciPR4_1973 SM00487 DEAD-like helicases superfamily AciPR4_1973 SM00490 helicase superfamily c-terminal domain AciPR4_1983 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AciPR4_1983 SM00091 PAS domain AciPR4_1983 SM00387 Histidine kinase-like ATPases AciPR4_1983 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_1984 SM00382 ATPases associated with a variety of cellular activities AciPR4_1984 SM00448 cheY-homologous receiver domain AciPR4_1985 SM00829 Enoylreductase AciPR4_1990 SM00822 AciPR4_1990 AciPR4_2004 SM00851 MGS-like domain AciPR4_2004 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AciPR4_2005 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AciPR4_2010 SM00861 Transketolase, pyrimidine binding domain AciPR4_2019 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AciPR4_2043 SM00878 Biotin carboxylase C-terminal domain AciPR4_2052 SM00859 Semialdehyde dehydrogenase, NAD binding domain AciPR4_2060 SM00382 ATPases associated with a variety of cellular activities AciPR4_2075 SM00450 Rhodanese Homology Domain AciPR4_2076 SM00642 Alpha-amylase domain AciPR4_2078 SM00316 Ribosomal protein S1-like RNA-binding domain AciPR4_2078 SM00732 Likely ribonuclease with RNase H fold. AciPR4_2082 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AciPR4_2082 SM00091 PAS domain AciPR4_2082 SM00387 Histidine kinase-like ATPases AciPR4_2082 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_2083 SM00448 cheY-homologous receiver domain AciPR4_2084 SM00052 Putative diguanylate phosphodiesterase AciPR4_2084 SM00091 PAS domain AciPR4_2084 SM00267 diguanylate cyclase AciPR4_2084 SM00448 cheY-homologous receiver domain AciPR4_2086 SM00052 Putative diguanylate phosphodiesterase AciPR4_2086 SM00091 PAS domain AciPR4_2086 SM00267 diguanylate cyclase AciPR4_2086 SM00448 cheY-homologous receiver domain AciPR4_2090 SM01018 B12 binding domain AciPR4_2091 SM00421 helix_turn_helix, Lux Regulon AciPR4_2091 SM00448 cheY-homologous receiver domain AciPR4_2093 SM00387 Histidine kinase-like ATPases AciPR4_2099 SM00729 Elongator protein 3, MiaB family, Radical SAM AciPR4_2100 SM00320 WD40 repeats AciPR4_2101 SM00060 Fibronectin type 3 domain AciPR4_2101 SM00560 LamG-like jellyroll fold domain AciPR4_2104 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AciPR4_2104 SM00387 Histidine kinase-like ATPases AciPR4_2105 SM00448 cheY-homologous receiver domain AciPR4_2105 SM00862 Transcriptional regulatory protein, C terminal AciPR4_2109 SM00347 helix_turn_helix multiple antibiotic resistance protein AciPR4_2110 SM00825 Beta-ketoacyl synthase AciPR4_2117 SM00382 ATPases associated with a variety of cellular activities AciPR4_2120 SM00344 helix_turn_helix ASNC type AciPR4_2122 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AciPR4_2131 SM00387 Histidine kinase-like ATPases AciPR4_2131 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_2132 SM00382 ATPases associated with a variety of cellular activities AciPR4_2132 SM00448 cheY-homologous receiver domain AciPR4_2133 SM00855 Phosphoglycerate mutase family AciPR4_2138 SM00387 Histidine kinase-like ATPases AciPR4_2139 SM00487 DEAD-like helicases superfamily AciPR4_2139 SM00490 helicase superfamily c-terminal domain AciPR4_2150 SM00829 Enoylreductase AciPR4_2156 SM00346 helix_turn_helix isocitrate lyase regulation AciPR4_2161 SM00387 Histidine kinase-like ATPases AciPR4_2161 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_2162 SM00448 cheY-homologous receiver domain AciPR4_2162 SM00862 Transcriptional regulatory protein, C terminal AciPR4_2165 SM00382 ATPases associated with a variety of cellular activities AciPR4_2166 SM00450 Rhodanese Homology Domain AciPR4_2176 SM00984 UDP binding domain AciPR4_2179 SM00448 cheY-homologous receiver domain AciPR4_2180 SM00382 ATPases associated with a variety of cellular activities AciPR4_2183 SM00642 Alpha-amylase domain AciPR4_2184 SM00267 diguanylate cyclase AciPR4_2190 SM01211 AciPR4_2190 AciPR4_2192 SM00822 AciPR4_2192 AciPR4_2194 SM00883 Chaperonin 10 Kd subunit AciPR4_2204 SM00729 Elongator protein 3, MiaB family, Radical SAM AciPR4_2205 SM00382 ATPases associated with a variety of cellular activities AciPR4_2215 SM00749 bacterial OsmY and nodulation domain AciPR4_2216 SM00642 Alpha-amylase domain AciPR4_2220 SM00710 Parallel beta-helix repeats AciPR4_2221 SM00448 cheY-homologous receiver domain AciPR4_2221 SM00862 Transcriptional regulatory protein, C terminal AciPR4_2222 SM00387 Histidine kinase-like ATPases AciPR4_2222 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_2223 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AciPR4_2223 SM00387 Histidine kinase-like ATPases AciPR4_2223 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_2224 SM00448 cheY-homologous receiver domain AciPR4_2224 SM00862 Transcriptional regulatory protein, C terminal AciPR4_2234 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_2259 SM00354 helix_turn _helix lactose operon repressor AciPR4_2264 SM00448 cheY-homologous receiver domain AciPR4_2264 SM00862 Transcriptional regulatory protein, C terminal AciPR4_2265 SM00387 Histidine kinase-like ATPases AciPR4_2265 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_2267 SM00320 WD40 repeats AciPR4_2268 SM00060 Fibronectin type 3 domain AciPR4_2268 SM00560 LamG-like jellyroll fold domain AciPR4_2273 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_2274 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_2292 SM00822 AciPR4_2292 AciPR4_2295 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_2296 SM00822 AciPR4_2296 AciPR4_2299 SM00640 Glycosyl hydrolases family 32 AciPR4_2308 SM00345 helix_turn_helix gluconate operon transcriptional repressor AciPR4_2323 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AciPR4_2336 SM00028 Tetratricopeptide repeats AciPR4_2336 SM00862 Transcriptional regulatory protein, C terminal AciPR4_2338 SM00944 Pro-kumamolisin, activation domain AciPR4_2344 SM00530 Helix-turn-helix XRE-family like proteins AciPR4_2363 SM00822 AciPR4_2363 AciPR4_2364 SM00829 Enoylreductase AciPR4_2366 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_2372 SM00829 Enoylreductase AciPR4_2374 SM00822 AciPR4_2374 AciPR4_2375 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_2376 SM00470 ParB-like nuclease domain AciPR4_2383 SM00530 Helix-turn-helix XRE-family like proteins AciPR4_2394 SM00530 Helix-turn-helix XRE-family like proteins AciPR4_2411 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AciPR4_2411 SM00387 Histidine kinase-like ATPases AciPR4_2411 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_2412 SM00448 cheY-homologous receiver domain AciPR4_2412 SM00862 Transcriptional regulatory protein, C terminal AciPR4_2417 SM00354 helix_turn _helix lactose operon repressor AciPR4_2418 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AciPR4_2418 SM00267 diguanylate cyclase AciPR4_2427 SM00635 Bacterial Ig-like domain 2 AciPR4_2427 SM00710 Parallel beta-helix repeats AciPR4_2448 SM00387 Histidine kinase-like ATPases AciPR4_2452 SM00465 GIY-YIG type nucleases (URI domain) AciPR4_2466 SM00650 Ribosomal RNA adenine dimethylases AciPR4_2481 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AciPR4_2482 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AciPR4_2482 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AciPR4_2497 SM00968 SMC proteins Flexible Hinge Domain AciPR4_2507 SM00420 helix_turn_helix, Deoxyribose operon repressor AciPR4_2507 SM01134 AciPR4_2507 AciPR4_2523 SM00316 Ribosomal protein S1-like RNA-binding domain AciPR4_2524 SM00829 Enoylreductase AciPR4_2537 SM00347 helix_turn_helix multiple antibiotic resistance protein AciPR4_2540 SM00387 Histidine kinase-like ATPases AciPR4_2541 SM00382 ATPases associated with a variety of cellular activities AciPR4_2541 SM00448 cheY-homologous receiver domain AciPR4_2544 SM00382 ATPases associated with a variety of cellular activities AciPR4_2554 SM00382 ATPases associated with a variety of cellular activities AciPR4_2558 SM00450 Rhodanese Homology Domain AciPR4_2559 SM00382 ATPases associated with a variety of cellular activities AciPR4_2559 SM00448 cheY-homologous receiver domain AciPR4_2560 SM00387 Histidine kinase-like ATPases AciPR4_2560 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_2562 SM00957 SecA DEAD-like domain AciPR4_2562 SM00958 SecA preprotein cross-linking domain AciPR4_2570 SM00116 Domain in cystathionine beta-synthase and other proteins. AciPR4_2570 SM01091 Transporter associated domain AciPR4_2575 SM00116 Domain in cystathionine beta-synthase and other proteins. AciPR4_2575 SM00924 MgtE intracellular N domain AciPR4_2582 SM00382 ATPases associated with a variety of cellular activities AciPR4_2594 SM00382 ATPases associated with a variety of cellular activities AciPR4_2595 SM00345 helix_turn_helix gluconate operon transcriptional repressor AciPR4_2595 SM00895 AciPR4_2595 AciPR4_2621 SM00729 Elongator protein 3, MiaB family, Radical SAM AciPR4_2625 SM00487 DEAD-like helicases superfamily AciPR4_2625 SM00490 helicase superfamily c-terminal domain AciPR4_2626 SM00448 cheY-homologous receiver domain AciPR4_2637 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AciPR4_2639 SM00822 AciPR4_2639 AciPR4_2648 SM00014 Acid phosphatase homologues AciPR4_2656 SM00812 Alpha-L-fucosidase AciPR4_2657 SM00812 Alpha-L-fucosidase AciPR4_2663 SM00354 helix_turn _helix lactose operon repressor AciPR4_2665 SM00346 helix_turn_helix isocitrate lyase regulation AciPR4_2667 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AciPR4_2667 SM00387 Histidine kinase-like ATPases AciPR4_2667 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_2668 SM00448 cheY-homologous receiver domain AciPR4_2668 SM00862 Transcriptional regulatory protein, C terminal AciPR4_2677 SM00944 Pro-kumamolisin, activation domain AciPR4_2678 SM00448 cheY-homologous receiver domain AciPR4_2678 SM00862 Transcriptional regulatory protein, C terminal AciPR4_2681 SM00267 diguanylate cyclase AciPR4_2683 SM00028 Tetratricopeptide repeats AciPR4_2690 SM00226 Low molecular weight phosphatase family AciPR4_2691 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AciPR4_2711 SM00354 helix_turn _helix lactose operon repressor AciPR4_2713 SM00710 Parallel beta-helix repeats AciPR4_2715 SM00872 Alpha mannosidase, middle domain AciPR4_2718 SM00862 Transcriptional regulatory protein, C terminal AciPR4_2722 SM00382 ATPases associated with a variety of cellular activities AciPR4_2731 SM00354 helix_turn _helix lactose operon repressor AciPR4_2733 SM00564 beta-propeller repeat AciPR4_2738 SM00346 helix_turn_helix isocitrate lyase regulation AciPR4_2739 SM01130 AciPR4_2739 AciPR4_2746 SM00354 helix_turn _helix lactose operon repressor AciPR4_2754 SM00642 Alpha-amylase domain AciPR4_2756 SM00862 Transcriptional regulatory protein, C terminal AciPR4_2762 SM00346 helix_turn_helix isocitrate lyase regulation AciPR4_2770 SM00387 Histidine kinase-like ATPases AciPR4_2771 SM00448 cheY-homologous receiver domain AciPR4_2771 SM00850 LytTr DNA-binding domain AciPR4_2774 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AciPR4_2774 SM00387 Histidine kinase-like ATPases AciPR4_2774 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_2775 SM00448 cheY-homologous receiver domain AciPR4_2775 SM00862 Transcriptional regulatory protein, C terminal AciPR4_2784 SM00267 diguanylate cyclase AciPR4_2786 SM00220 Serine/Threonine protein kinases, catalytic domain AciPR4_2790 SM00458 Ricin-type beta-trefoil AciPR4_2790 SM00564 beta-propeller repeat AciPR4_2797 SM00382 ATPases associated with a variety of cellular activities AciPR4_2805 SM00345 helix_turn_helix gluconate operon transcriptional repressor AciPR4_2805 SM00895 AciPR4_2805 AciPR4_2809 SM00421 helix_turn_helix, Lux Regulon AciPR4_2822 SM00346 helix_turn_helix isocitrate lyase regulation AciPR4_2825 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_2833 SM00028 Tetratricopeptide repeats AciPR4_2833 SM00862 Transcriptional regulatory protein, C terminal AciPR4_2839 SM00100 Cyclic nucleotide-monophosphate binding domain AciPR4_2843 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AciPR4_2848 SM00345 helix_turn_helix gluconate operon transcriptional repressor AciPR4_2848 SM00866 AciPR4_2848 AciPR4_2854 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AciPR4_2854 SM00387 Histidine kinase-like ATPases AciPR4_2854 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_2855 SM00448 cheY-homologous receiver domain AciPR4_2855 SM00862 Transcriptional regulatory protein, C terminal AciPR4_2856 SM00382 ATPases associated with a variety of cellular activities AciPR4_2856 SM00448 cheY-homologous receiver domain AciPR4_2857 SM00387 Histidine kinase-like ATPases AciPR4_2857 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_2865 SM00387 Histidine kinase-like ATPases AciPR4_2865 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_2869 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AciPR4_2869 SM00387 Histidine kinase-like ATPases AciPR4_2869 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_2870 SM00448 cheY-homologous receiver domain AciPR4_2870 SM00862 Transcriptional regulatory protein, C terminal AciPR4_2877 SM00867 YceI-like domain AciPR4_2881 SM00100 Cyclic nucleotide-monophosphate binding domain AciPR4_2885 SM00478 endonuclease III AciPR4_2886 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_2891 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_2909 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_2911 SM00671 Sel1-like repeats. AciPR4_2913 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AciPR4_2918 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AciPR4_2918 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AciPR4_2918 SM00091 PAS domain AciPR4_2918 SM00387 Histidine kinase-like ATPases AciPR4_2918 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_2920 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AciPR4_2920 SM00091 PAS domain AciPR4_2920 SM00267 diguanylate cyclase AciPR4_2921 SM00470 ParB-like nuclease domain AciPR4_2927 SM00255 Toll - interleukin 1 - resistance AciPR4_2934 SM00382 ATPases associated with a variety of cellular activities AciPR4_2935 SM00530 Helix-turn-helix XRE-family like proteins AciPR4_2968 SM00411 bacterial (prokaryotic) histone like domain AciPR4_2971 SM00530 Helix-turn-helix XRE-family like proteins AciPR4_2976 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AciPR4_2988 SM00357 Cold shock protein domain AciPR4_2989 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AciPR4_2989 SM00481 DNA polymerase alpha chain like domain AciPR4_2989 SM00483 DNA polymerase X family AciPR4_2995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AciPR4_3005 SM00822 AciPR4_3005 AciPR4_3019 SM00855 Phosphoglycerate mutase family AciPR4_3024 SM00422 helix_turn_helix, mercury resistance AciPR4_3025 SM00822 AciPR4_3025 AciPR4_3026 SM00271 DnaJ molecular chaperone homology domain AciPR4_3028 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AciPR4_3028 SM01232 AciPR4_3028 AciPR4_3039 SM00382 ATPases associated with a variety of cellular activities AciPR4_3052 SM00460 Transglutaminase/protease-like homologues AciPR4_3057 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_3058 SM00996 S-adenosyl-L-homocysteine hydrolase AciPR4_3058 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AciPR4_3070 SM00327 von Willebrand factor (vWF) type A domain AciPR4_3091 SM00480 DNA polymerase III beta subunit AciPR4_3111 SM00382 ATPases associated with a variety of cellular activities AciPR4_3112 SM01133 AciPR4_3112 AciPR4_3113 SM00244 prohibitin homologues AciPR4_3114 SM00345 helix_turn_helix gluconate operon transcriptional repressor AciPR4_3121 SM00518 AP endonuclease family 2 AciPR4_3124 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AciPR4_3124 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AciPR4_3124 SM00493 AciPR4_3124 AciPR4_3129 SM00729 Elongator protein 3, MiaB family, Radical SAM AciPR4_3134 SM00530 Helix-turn-helix XRE-family like proteins AciPR4_3136 SM00852 Probable molybdopterin binding domain AciPR4_3137 SM01207 AciPR4_3137 AciPR4_3139 SM00382 ATPases associated with a variety of cellular activities AciPR4_3139 SM00962 SRP54-type protein, GTPase domain AciPR4_3139 SM00963 SRP54-type protein, helical bundle domain AciPR4_3149 SM00881 CoA binding domain AciPR4_3150 SM00562 AciPR4_3150 AciPR4_3169 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AciPR4_3171 SM00849 Metallo-beta-lactamase superfamily AciPR4_3175 SM01152 AciPR4_3175 AciPR4_3191 SM00116 Domain in cystathionine beta-synthase and other proteins. AciPR4_3191 SM01240 AciPR4_3191 AciPR4_3192 SM00052 Putative diguanylate phosphodiesterase AciPR4_3195 SM00316 Ribosomal protein S1-like RNA-binding domain AciPR4_3195 SM00322 K homology RNA-binding domain AciPR4_3208 SM00662 RNA polymerases D AciPR4_3209 SM00363 S4 RNA-binding domain AciPR4_3209 SM01390 AciPR4_3209 AciPR4_3213 SM00316 Ribosomal protein S1-like RNA-binding domain AciPR4_3225 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AciPR4_3226 SM01374 AciPR4_3226 AciPR4_3230 SM00322 K homology RNA-binding domain AciPR4_3233 SM01382 AciPR4_3233 AciPR4_3233 SM01383 AciPR4_3233 AciPR4_3237 SM01403 AciPR4_3237 AciPR4_3239 SM00838 Elongation factor G C-terminus AciPR4_3239 SM00889 Elongation factor G, domain IV AciPR4_3254 SM00849 Metallo-beta-lactamase superfamily AciPR4_3256 SM00331 Sigma factor PP2C-like phosphatases AciPR4_3256 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AciPR4_3261 SM00382 ATPases associated with a variety of cellular activities AciPR4_3291 SM00729 Elongator protein 3, MiaB family, Radical SAM AciPR4_3292 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AciPR4_3292 SM00267 diguanylate cyclase AciPR4_3299 SM00886 Stress responsive A/B Barrel Domain AciPR4_3312 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AciPR4_3316 SM00460 Transglutaminase/protease-like homologues AciPR4_3320 SM00387 Histidine kinase-like ATPases AciPR4_3320 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_3324 SM00387 Histidine kinase-like ATPases AciPR4_3324 SM00433 TopoisomeraseII AciPR4_3325 SM00966 SpoVT / AbrB like domain AciPR4_3327 SM00636 AciPR4_3327 AciPR4_3329 SM00822 AciPR4_3329 AciPR4_3330 SM00382 ATPases associated with a variety of cellular activities AciPR4_3331 SM00679 Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins. AciPR4_3340 SM00729 Elongator protein 3, MiaB family, Radical SAM AciPR4_3341 SM00091 PAS domain AciPR4_3341 SM00387 Histidine kinase-like ATPases AciPR4_3341 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_3345 SM00642 Alpha-amylase domain AciPR4_3347 SM00382 ATPases associated with a variety of cellular activities AciPR4_3353 SM00052 Putative diguanylate phosphodiesterase AciPR4_3353 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AciPR4_3353 SM00091 PAS domain AciPR4_3354 SM00052 Putative diguanylate phosphodiesterase AciPR4_3354 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AciPR4_3354 SM00091 PAS domain AciPR4_3354 SM00267 diguanylate cyclase AciPR4_3364 SM00345 helix_turn_helix gluconate operon transcriptional repressor AciPR4_3364 SM00895 AciPR4_3364 AciPR4_3388 SM00052 Putative diguanylate phosphodiesterase AciPR4_3389 SM01034 Sensors of blue-light using FAD AciPR4_3400 SM00955 AciPR4_3400 AciPR4_3404 SM00382 ATPases associated with a variety of cellular activities AciPR4_3410 SM00507 HNH nucleases AciPR4_3413 SM00316 Ribosomal protein S1-like RNA-binding domain AciPR4_3416 SM00382 ATPases associated with a variety of cellular activities AciPR4_3426 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AciPR4_3426 SM01232 AciPR4_3426 AciPR4_3428 SM00788 Adenylosuccinate synthetase AciPR4_3433 SM00840 AciPR4_3433 AciPR4_3437 SM00729 Elongator protein 3, MiaB family, Radical SAM AciPR4_3442 SM00649 Ribosomal protein L11/L12 AciPR4_3443 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AciPR4_3443 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AciPR4_3469 SM00232 JAB/MPN domain AciPR4_3470 SM00450 Rhodanese Homology Domain AciPR4_3471 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AciPR4_3486 SM00642 Alpha-amylase domain AciPR4_3487 SM00642 Alpha-amylase domain AciPR4_3488 SM00642 Alpha-amylase domain AciPR4_3489 SM00642 Alpha-amylase domain AciPR4_3503 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AciPR4_3504 SM00382 ATPases associated with a variety of cellular activities AciPR4_3531 SM00487 DEAD-like helicases superfamily AciPR4_3531 SM00491 AciPR4_3531 AciPR4_3537 SM00530 Helix-turn-helix XRE-family like proteins AciPR4_3539 SM00358 Double-stranded RNA binding motif AciPR4_3539 SM00535 Ribonuclease III family AciPR4_3545 SM00967 RNA 2'-O ribose methyltransferase substrate binding AciPR4_3549 SM00448 cheY-homologous receiver domain AciPR4_3549 SM00850 LytTr DNA-binding domain AciPR4_3555 SM00450 Rhodanese Homology Domain AciPR4_3562 SM00852 Probable molybdopterin binding domain AciPR4_3563 SM00347 helix_turn_helix multiple antibiotic resistance protein AciPR4_3567 SM00028 Tetratricopeptide repeats AciPR4_3579 SM00487 DEAD-like helicases superfamily AciPR4_3579 SM00490 helicase superfamily c-terminal domain AciPR4_3594 SM00028 Tetratricopeptide repeats AciPR4_3595 SM00729 Elongator protein 3, MiaB family, Radical SAM AciPR4_3598 SM00382 ATPases associated with a variety of cellular activities AciPR4_3601 SM00830 Chorismate mutase type II AciPR4_3606 SM00729 Elongator protein 3, MiaB family, Radical SAM AciPR4_3606 SM00876 Biotin and Thiamin Synthesis associated domain AciPR4_3612 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_3632 SM00420 helix_turn_helix, Deoxyribose operon repressor AciPR4_3632 SM01134 AciPR4_3632 AciPR4_3653 SM00052 Putative diguanylate phosphodiesterase AciPR4_3653 SM00267 diguanylate cyclase AciPR4_3660 SM00563 Phosphate acyltransferases AciPR4_3674 SM00935 Outer membrane protein (OmpH-like) AciPR4_3677 SM00257 Lysin motif AciPR4_3686 SM00822 AciPR4_3686 AciPR4_3694 SM00849 Metallo-beta-lactamase superfamily AciPR4_3707 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_3708 SM01266 AciPR4_3708 AciPR4_3719 SM00100 Cyclic nucleotide-monophosphate binding domain AciPR4_3743 SM00470 ParB-like nuclease domain AciPR4_3749 SM00382 ATPases associated with a variety of cellular activities AciPR4_3782 SM00812 Alpha-L-fucosidase AciPR4_3788 SM00316 Ribosomal protein S1-like RNA-binding domain AciPR4_3788 SM00357 Cold shock protein domain AciPR4_3788 SM00955 AciPR4_3788 AciPR4_3799 SM00400 zinc finger AciPR4_3799 SM00493 AciPR4_3799 AciPR4_3807 SM00267 diguanylate cyclase AciPR4_3815 SM01209 AciPR4_3815 AciPR4_3815 SM01210 AciPR4_3815 AciPR4_3824 SM00812 Alpha-L-fucosidase AciPR4_3828 SM00822 AciPR4_3828 AciPR4_3844 SM00382 ATPases associated with a variety of cellular activities AciPR4_3847 SM00363 S4 RNA-binding domain AciPR4_3847 SM01390 AciPR4_3847 AciPR4_3852 SM00421 helix_turn_helix, Lux Regulon AciPR4_3852 SM00448 cheY-homologous receiver domain AciPR4_3853 SM00387 Histidine kinase-like ATPases AciPR4_3855 SM00382 ATPases associated with a variety of cellular activities AciPR4_3859 SM00347 helix_turn_helix multiple antibiotic resistance protein AciPR4_3864 SM00830 Chorismate mutase type II AciPR4_3870 SM01235 AciPR4_3870 AciPR4_3878 SM00448 cheY-homologous receiver domain AciPR4_3880 SM00028 Tetratricopeptide repeats AciPR4_3882 SM00646 AciPR4_3882 AciPR4_3883 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AciPR4_3884 SM00267 diguanylate cyclase AciPR4_3894 SM00434 DNA Topoisomerase IV AciPR4_3903 SM00710 Parallel beta-helix repeats AciPR4_3911 SM00357 Cold shock protein domain AciPR4_3930 SM00966 SpoVT / AbrB like domain AciPR4_3937 SM01060 AciPR4_3937 AciPR4_3939 SM00829 Enoylreductase AciPR4_3940 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AciPR4_3947 SM01400 AciPR4_3947 AciPR4_3951 SM00382 ATPases associated with a variety of cellular activities AciPR4_3951 SM01086 C-terminal, D2-small domain, of ClpB protein AciPR4_3956 SM00028 Tetratricopeptide repeats AciPR4_3958 SM00937 AciPR4_3958 AciPR4_3978 SM00729 Elongator protein 3, MiaB family, Radical SAM AciPR4_3987 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AciPR4_3997 SM00028 Tetratricopeptide repeats AciPR4_4008 SM00732 Likely ribonuclease with RNase H fold. AciPR4_4017 SM00849 Metallo-beta-lactamase superfamily AciPR4_4028 SM00729 Elongator protein 3, MiaB family, Radical SAM AciPR4_4032 SM00028 Tetratricopeptide repeats AciPR4_4034 SM01323 AciPR4_4034 AciPR4_4054 SM00478 endonuclease III AciPR4_4076 SM01005 Alanine racemase, C-terminal domain AciPR4_4082 SM01228 AciPR4_4082 AciPR4_4086 SM00450 Rhodanese Homology Domain AciPR4_4101 SM00507 HNH nucleases AciPR4_4133 SM00563 Phosphate acyltransferases AciPR4_4151 SM00347 helix_turn_helix multiple antibiotic resistance protein AciPR4_4155 SM00470 ParB-like nuclease domain AciPR4_4162 SM00411 bacterial (prokaryotic) histone like domain AciPR4_4177 SM00450 Rhodanese Homology Domain AciPR4_4178 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AciPR4_4179 SM00450 Rhodanese Homology Domain AciPR4_4179 SM00849 Metallo-beta-lactamase superfamily AciPR4_4182 SM00530 Helix-turn-helix XRE-family like proteins AciPR4_4184 SM00382 ATPases associated with a variety of cellular activities AciPR4_4185 SM00091 PAS domain AciPR4_4185 SM00387 Histidine kinase-like ATPases AciPR4_4185 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_4190 SM00710 Parallel beta-helix repeats AciPR4_4194 SM00267 diguanylate cyclase AciPR4_4196 SM00387 Histidine kinase-like ATPases AciPR4_4197 SM00829 Enoylreductase AciPR4_4204 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AciPR4_4210 SM00382 ATPases associated with a variety of cellular activities AciPR4_4215 SM00342 helix_turn_helix, arabinose operon control protein AciPR4_4216 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AciPR4_4216 SM00245 tail specific protease AciPR4_4224 SM00480 DNA polymerase III beta subunit AciPR4_4235 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AciPR4_4238 SM00642 Alpha-amylase domain AciPR4_4246 SM00564 beta-propeller repeat AciPR4_4261 SM00448 cheY-homologous receiver domain AciPR4_4261 SM00862 Transcriptional regulatory protein, C terminal AciPR4_4263 SM00387 Histidine kinase-like ATPases AciPR4_4263 SM00388 His Kinase A (phosphoacceptor) domain AciPR4_4275 SM00393 Putative single-stranded nucleic acids-binding domain AciPR4_4277 SM01234 AciPR4_4277