locus-tag class description L0P85_00005 PF01276 Orn/Lys/Arg decarboxylase, major domain L0P85_00005 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain L0P85_00010 PF00625 Guanylate kinase L0P85_00015 PF12169 DNA polymerase III subunits gamma and tau domain III L0P85_00020 PF04468 PSP1 C-terminal conserved region L0P85_00025 PF05175 Methyltransferase small domain L0P85_00030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L0P85_00040 PF01037 Lrp/AsnC ligand binding domain L0P85_00045 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family L0P85_00045 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain L0P85_00045 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain L0P85_00055 PF07670 Nucleoside recognition L0P85_00065 PF01026 TatD related DNase L0P85_00075 PF00392 Bacterial regulatory proteins, gntR family L0P85_00080 PF00005 ABC transporter L0P85_00100 PF04542 Sigma-70 region 2 L0P85_00100 PF08281 Sigma-70, region 4 L0P85_00160 PF13331 Domain of unknown function (DUF4093) L0P85_00160 PF01751 Toprim domain L0P85_00165 PF00398 Ribosomal RNA adenine dimethylase L0P85_00195 PF02875 Mur ligase family, glutamate ligase domain L0P85_00195 PF08245 Mur ligase middle domain L0P85_00195 PF01225 Mur ligase family, catalytic domain L0P85_00200 PF09182 Bacterial purine repressor, N-terminal L0P85_00200 PF00156 Phosphoribosyl transferase domain L0P85_00205 PF04026 SpoVG L0P85_00210 PF00579 tRNA synthetases class I (W and Y) L0P85_00215 PF00132 Bacterial transferase hexapeptide (six repeats) L0P85_00215 PF14602 Hexapeptide repeat of succinyl-transferase L0P85_00215 PF00483 Nucleotidyl transferase L0P85_00220 PF14572 Phosphoribosyl synthetase-associated domain L0P85_00220 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase L0P85_00225 PF00437 Type II/IV secretion system protein L0P85_00235 PF01195 Peptidyl-tRNA hydrolase L0P85_00240 PF02559 CarD-like/TRCF domain L0P85_00240 PF00270 DEAD/DEAH box helicase L0P85_00240 PF00271 Helicase conserved C-terminal domain L0P85_00240 PF17757 UvrB interaction domain L0P85_00240 PF03461 TRCF domain L0P85_00250 PF05698 Bacterial trigger factor protein (TF) C-terminus L0P85_00255 PF15714 Stage V sporulation protein T C-terminal, transcription factor L0P85_00255 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin L0P85_00265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L0P85_00265 PF03819 MazG nucleotide pyrophosphohydrolase domain L0P85_00270 PF00216 Bacterial DNA-binding protein L0P85_00275 PF01479 S4 domain L0P85_00280 PF07873 YabP family L0P85_00295 PF02541 Ppx/GppA phosphatase family L0P85_00295 PF01761 3-dehydroquinate synthase L0P85_00300 PF07228 Stage II sporulation protein E (SpoIIE) L0P85_00305 PF08439 Oligopeptidase F L0P85_00305 PF01432 Peptidase family M3 L0P85_00310 PF00483 Nucleotidyl transferase L0P85_00315 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded L0P85_00320 PF07497 Rho termination factor, RNA-binding domain L0P85_00320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L0P85_00320 PF07498 Rho termination factor, N-terminal domain L0P85_00325 PF01197 Ribosomal protein L31 L0P85_00330 PF00265 Thymidine kinase L0P85_00335 PF07136 Protein of unknown function (DUF1385) L0P85_00340 PF05175 Methyltransferase small domain L0P85_00340 PF17827 PrmC N-terminal domain L0P85_00345 PF03462 PCRF domain L0P85_00345 PF00472 RF-1 domain L0P85_00355 PF03481 Putative GTP-binding controlling metal-binding L0P85_00355 PF01300 Telomere recombination L0P85_00360 PF02502 Ribose/Galactose Isomerase L0P85_00380 PF00119 ATP synthase A chain L0P85_00385 PF00137 ATP synthase subunit C L0P85_00390 PF00430 ATP synthase B/B' CF(0) L0P85_00395 PF00213 ATP synthase delta (OSCP) subunit L0P85_00405 PF00231 ATP synthase L0P85_00415 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain L0P85_00415 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain L0P85_00420 PF01648 4'-phosphopantetheinyl transferase superfamily L0P85_00440 PF00456 Transketolase, thiamine diphosphate binding domain L0P85_00445 PF02780 Transketolase, C-terminal domain L0P85_00445 PF02779 Transketolase, pyrimidine binding domain L0P85_00455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L0P85_00455 PF00672 HAMP domain L0P85_00455 PF02743 Cache domain L0P85_00460 PF01812 5-formyltetrahydrofolate cyclo-ligase family L0P85_00465 PF17820 PDZ domain L0P85_00465 PF03572 Peptidase family S41 L0P85_00465 PF01471 Putative peptidoglycan binding domain L0P85_00475 PF02277 Phosphoribosyltransferase L0P85_00480 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase L0P85_00485 PF02654 Cobalamin-5-phosphate synthase L0P85_00495 PF00465 Iron-containing alcohol dehydrogenase L0P85_00510 PF13361 UvrD-like helicase C-terminal domain L0P85_00510 PF00580 UvrD/REP helicase N-terminal domain L0P85_00515 PF02127 Aminopeptidase I zinc metalloprotease (M18) L0P85_00520 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD L0P85_00525 PF01368 DHH family L0P85_00525 PF02833 DHHA2 domain L0P85_00550 PF04607 Region found in RelA / SpoT proteins L0P85_00575 PF12804 MobA-like NTP transferase domain L0P85_00580 PF03453 MoeA N-terminal region (domain I and II) L0P85_00580 PF03454 MoeA C-terminal region (domain IV) L0P85_00580 PF00994 Probable molybdopterin binding domain L0P85_00585 PF02223 Thymidylate kinase L0P85_00590 PF04055 Radical SAM superfamily L0P85_00590 PF06463 Molybdenum Cofactor Synthesis C L0P85_00600 PF00994 Probable molybdopterin binding domain L0P85_00605 PF02634 FdhD/NarQ family L0P85_00610 PF01226 Formate/nitrite transporter L0P85_00615 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_00615 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster L0P85_00615 PF13247 4Fe-4S dicluster domain L0P85_00620 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region L0P85_00620 PF00037 4Fe-4S binding domain L0P85_00620 PF02256 Iron hydrogenase small subunit L0P85_00620 PF02906 Iron only hydrogenase large subunit, C-terminal domain L0P85_00625 PF12800 4Fe-4S binding domain L0P85_00625 PF13247 4Fe-4S dicluster domain L0P85_00635 PF01565 FAD binding domain L0P85_00635 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain L0P85_00645 PF03668 P-loop ATPase protein family L0P85_00650 PF01933 Uncharacterised protein family UPF0052 L0P85_00655 PF00293 NUDIX domain L0P85_00660 PF10298 WhiA N-terminal LAGLIDADG-like domain L0P85_00660 PF02650 WhiA C-terminal HTH domain L0P85_00660 PF14527 WhiA LAGLIDADG-like domain L0P85_00665 PF14579 Helix-hairpin-helix motif L0P85_00665 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L0P85_00665 PF01336 OB-fold nucleic acid binding domain L0P85_00665 PF07733 Bacterial DNA polymerase III alpha NTPase domain L0P85_00665 PF02811 PHP domain L0P85_00670 PF00365 Phosphofructokinase L0P85_00675 PF00224 Pyruvate kinase, barrel domain L0P85_00675 PF02887 Pyruvate kinase, alpha/beta domain L0P85_00675 PF00391 PEP-utilising enzyme, mobile domain L0P85_00680 PF00209 Sodium:neurotransmitter symporter family L0P85_00690 PF01938 TRAM domain L0P85_00690 PF05958 tRNA (Uracil-5-)-methyltransferase L0P85_00695 PF02423 Ornithine cyclodeaminase/mu-crystallin family L0P85_00705 PF00258 Flavodoxin L0P85_00705 PF00753 Metallo-beta-lactamase superfamily L0P85_00710 PF13419 Haloacid dehalogenase-like hydrolase L0P85_00715 PF13847 Methyltransferase domain L0P85_00730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L0P85_00745 PF03063 Prismane/CO dehydrogenase family L0P85_00780 PF00533 BRCA1 C Terminus (BRCT) domain L0P85_00780 PF01653 NAD-dependent DNA ligase adenylation domain L0P85_00780 PF03120 NAD-dependent DNA ligase OB-fold domain L0P85_00780 PF03119 NAD-dependent DNA ligase C4 zinc finger domain L0P85_00780 PF12826 Helix-hairpin-helix motif L0P85_00785 PF01138 3' exoribonuclease family, domain 1 L0P85_00785 PF03725 3' exoribonuclease family, domain 2 L0P85_00795 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase L0P85_00795 PF05698 Bacterial trigger factor protein (TF) C-terminus L0P85_00795 PF05697 Bacterial trigger factor protein (TF) L0P85_00800 PF00574 Clp protease L0P85_00805 PF10431 C-terminal, D2-small domain, of ClpB protein L0P85_00805 PF06689 ClpX C4-type zinc finger L0P85_00805 PF07724 AAA domain (Cdc48 subfamily) L0P85_00810 PF00004 ATPase family associated with various cellular activities (AAA) L0P85_00810 PF05362 Lon protease (S16) C-terminal proteolytic domain L0P85_00810 PF02190 ATP-dependent protease La (LON) substrate-binding domain L0P85_00815 PF01926 50S ribosome-binding GTPase L0P85_00820 PF01584 CheW-like domain L0P85_00820 PF00072 Response regulator receiver domain L0P85_00830 PF00437 Type II/IV secretion system protein L0P85_00830 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain L0P85_00835 PF00482 Type II secretion system (T2SS), protein F L0P85_00840 PF07963 Prokaryotic N-terminal methylation motif L0P85_00840 PF00114 Pilin (bacterial filament) L0P85_00865 PF05225 helix-turn-helix, Psq domain L0P85_00865 PF02810 SEC-C motif L0P85_00880 PF02690 Na+/Pi-cotransporter L0P85_00885 PF00342 Phosphoglucose isomerase L0P85_00890 PF13180 PDZ domain L0P85_00905 PF17910 FeoB cytosolic helical domain L0P85_00905 PF02421 Ferrous iron transport protein B L0P85_00905 PF07670 Nucleoside recognition L0P85_00905 PF07664 Ferrous iron transport protein B C terminus L0P85_00925 PF00924 Mechanosensitive ion channel L0P85_00930 PF02308 MgtC family L0P85_00935 PF08439 Oligopeptidase F L0P85_00935 PF01432 Peptidase family M3 L0P85_00950 PF12849 PBP superfamily domain L0P85_00955 PF00860 Permease family L0P85_00960 PF00156 Phosphoribosyl transferase domain L0P85_00965 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_00970 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_00975 PF00005 ABC transporter L0P85_00980 PF01895 PhoU domain L0P85_00995 PF01522 Polysaccharide deacetylase L0P85_01000 PF08264 Anticodon-binding domain of tRNA L0P85_01000 PF00133 tRNA synthetases class I (I, L, M and V) L0P85_01000 PF10458 Valyl tRNA synthetase tRNA binding arm L0P85_01005 PF02875 Mur ligase family, glutamate ligase domain L0P85_01005 PF08245 Mur ligase middle domain L0P85_01025 PF00269 Small, acid-soluble spore proteins, alpha/beta type L0P85_01030 PF01522 Polysaccharide deacetylase L0P85_01045 PF02954 Bacterial regulatory protein, Fis family L0P85_01045 PF00158 Sigma-54 interaction domain L0P85_01045 PF13188 PAS domain L0P85_01050 PF03313 Serine dehydratase alpha chain L0P85_01055 PF00156 Phosphoribosyl transferase domain L0P85_01065 PF00579 tRNA synthetases class I (W and Y) L0P85_01070 PF03788 LrgA family L0P85_01075 PF04172 LrgB-like family L0P85_01080 PF00132 Bacterial transferase hexapeptide (six repeats) L0P85_01080 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal L0P85_01080 PF14602 Hexapeptide repeat of succinyl-transferase L0P85_01085 PF01113 Dihydrodipicolinate reductase, N-terminus L0P85_01085 PF05173 Dihydrodipicolinate reductase, C-terminus L0P85_01090 PF00701 Dihydrodipicolinate synthetase family L0P85_01095 PF02774 Semialdehyde dehydrogenase, dimerisation domain L0P85_01095 PF01118 Semialdehyde dehydrogenase, NAD binding domain L0P85_01100 PF03313 Serine dehydratase alpha chain L0P85_01100 PF03315 Serine dehydratase beta chain L0P85_01110 PF00005 ABC transporter L0P85_01110 PF12704 MacB-like periplasmic core domain L0P85_01110 PF02687 FtsX-like permease family L0P85_01120 PF07687 Peptidase dimerisation domain L0P85_01120 PF01546 Peptidase family M20/M25/M40 L0P85_01130 PF13649 Methyltransferase domain L0P85_01135 PF01430 Hsp33 protein L0P85_01140 PF00392 Bacterial regulatory proteins, gntR family L0P85_01145 PF00005 ABC transporter L0P85_01180 PF00155 Aminotransferase class I and II L0P85_01185 PF00497 Bacterial extracellular solute-binding proteins, family 3 L0P85_01190 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_01195 PF00005 ABC transporter L0P85_01200 PF01235 Sodium:alanine symporter family L0P85_01205 PF03009 Glycerophosphoryl diester phosphodiesterase family L0P85_01210 PF04309 Glycerol-3-phosphate responsive antiterminator L0P85_01215 PF04324 BFD-like [2Fe-2S] binding domain L0P85_01215 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_01220 PF04324 BFD-like [2Fe-2S] binding domain L0P85_01220 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_01230 PF04198 Putative sugar-binding domain L0P85_01235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain L0P85_01235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain L0P85_01240 PF00162 Phosphoglycerate kinase L0P85_01250 PF06415 BPG-independent PGAM N-terminus (iPGM_N) L0P85_01250 PF01676 Metalloenzyme superfamily L0P85_01255 PF00113 Enolase, C-terminal TIM barrel domain L0P85_01255 PF03952 Enolase, N-terminal domain L0P85_01265 PF00356 Bacterial regulatory proteins, lacI family L0P85_01270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L0P85_01270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L0P85_01270 PF02770 Acyl-CoA dehydrogenase, middle domain L0P85_01275 PF01012 Electron transfer flavoprotein domain L0P85_01280 PF00766 Electron transfer flavoprotein FAD-binding domain L0P85_01280 PF01012 Electron transfer flavoprotein domain L0P85_01285 PF03061 Thioesterase superfamily L0P85_01290 PF01625 Peptide methionine sulfoxide reductase L0P85_01290 PF01641 SelR domain L0P85_01300 PF08000 Bacterial PH domain L0P85_01310 PF00773 RNB domain L0P85_01310 PF08206 Ribonuclease B OB domain L0P85_01310 PF00575 S1 RNA binding domain L0P85_01310 PF17876 Cold shock domain L0P85_01320 PF03063 Prismane/CO dehydrogenase family L0P85_01325 PF02557 D-alanyl-D-alanine carboxypeptidase L0P85_01330 PF00072 Response regulator receiver domain L0P85_01330 PF00486 Transcriptional regulatory protein, C terminal L0P85_01335 PF00672 HAMP domain L0P85_01335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_01335 PF13426 PAS domain L0P85_01335 PF00512 His Kinase A (phospho-acceptor) domain L0P85_01340 PF02696 Uncharacterized ACR, YdiU/UPF0061 family L0P85_01345 PF08239 Bacterial SH3 domain L0P85_01345 PF01183 Glycosyl hydrolases family 25 L0P85_01350 PF00005 ABC transporter L0P85_01355 PF02687 FtsX-like permease family L0P85_01360 PF00486 Transcriptional regulatory protein, C terminal L0P85_01360 PF00072 Response regulator receiver domain L0P85_01365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_01370 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_01375 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_01375 PF12911 N-terminal TM domain of oligopeptide transport permease C L0P85_01380 PF00005 ABC transporter L0P85_01380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L0P85_01385 PF00005 ABC transporter L0P85_01385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L0P85_01390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L0P85_01400 PF02659 Putative manganese efflux pump L0P85_01415 PF01668 SmpB protein L0P85_01435 PF03527 RHS protein L0P85_01435 PF05593 RHS Repeat L0P85_01445 PF15606 Bacterial toxin 34 L0P85_01445 PF03527 RHS protein L0P85_01445 PF05593 RHS Repeat L0P85_01475 PF00860 Permease family L0P85_01485 PF06445 GyrI-like small molecule binding domain L0P85_01485 PF12833 Helix-turn-helix domain L0P85_01495 PF00486 Transcriptional regulatory protein, C terminal L0P85_01495 PF00072 Response regulator receiver domain L0P85_01500 PF00512 His Kinase A (phospho-acceptor) domain L0P85_01500 PF09308 LuxQ, periplasmic L0P85_01500 PF00072 Response regulator receiver domain L0P85_01500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_01505 PF02687 FtsX-like permease family L0P85_01505 PF12704 MacB-like periplasmic core domain L0P85_01510 PF00005 ABC transporter L0P85_01515 PF03613 PTS system mannose/fructose/sorbose family IID component L0P85_01520 PF03609 PTS system sorbose-specific iic component L0P85_01525 PF03830 PTS system sorbose subfamily IIB component L0P85_01540 PF03610 PTS system fructose IIA component L0P85_01545 PF01380 SIS domain L0P85_01560 PF01116 Fructose-bisphosphate aldolase class-II L0P85_01565 PF00294 pfkB family carbohydrate kinase L0P85_01570 PF00005 ABC transporter L0P85_01570 PF09383 NIL domain L0P85_01575 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_01600 PF08402 TOBE domain L0P85_01600 PF00005 ABC transporter L0P85_01605 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_01610 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_01615 PF13416 Bacterial extracellular solute-binding protein L0P85_01620 PF00005 ABC transporter L0P85_01655 PF00512 His Kinase A (phospho-acceptor) domain L0P85_01655 PF00989 PAS fold L0P85_01655 PF16736 Single Cache-like L0P85_01655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_01660 PF00072 Response regulator receiver domain L0P85_01660 PF00486 Transcriptional regulatory protein, C terminal L0P85_01690 PF07670 Nucleoside recognition L0P85_01695 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain L0P85_01695 PF00056 lactate/malate dehydrogenase, NAD binding domain L0P85_01700 PF09339 IclR helix-turn-helix domain L0P85_01700 PF01614 Bacterial transcriptional regulator L0P85_01710 PF16736 Single Cache-like L0P85_01710 PF00512 His Kinase A (phospho-acceptor) domain L0P85_01710 PF00989 PAS fold L0P85_01710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_01720 PF01047 MarR family L0P85_01725 PF00255 Glutathione peroxidase L0P85_01730 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_01735 PF00085 Thioredoxin L0P85_01740 PF00072 Response regulator receiver domain L0P85_01740 PF00486 Transcriptional regulatory protein, C terminal L0P85_01745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_01745 PF00512 His Kinase A (phospho-acceptor) domain L0P85_01750 PF00512 His Kinase A (phospho-acceptor) domain L0P85_01750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_01790 PF01032 FecCD transport family L0P85_01795 PF00005 ABC transporter L0P85_01800 PF01648 4'-phosphopantetheinyl transferase superfamily L0P85_01805 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III L0P85_01805 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal L0P85_01810 PF00550 Phosphopantetheine attachment site L0P85_01815 PF03060 Nitronate monooxygenase L0P85_01820 PF00698 Acyl transferase domain L0P85_01830 PF02801 Beta-ketoacyl synthase, C-terminal domain L0P85_01830 PF00109 Beta-ketoacyl synthase, N-terminal domain L0P85_01835 PF00364 Biotin-requiring enzyme L0P85_01840 PF07977 FabA-like domain L0P85_01845 PF00289 Biotin carboxylase, N-terminal domain L0P85_01845 PF02785 Biotin carboxylase C-terminal domain L0P85_01845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L0P85_01850 PF01039 Carboxyl transferase domain L0P85_01850 PF17848 Acetyl-coA carboxylase zinc finger domain L0P85_01855 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit L0P85_01875 PF04015 Domain of unknown function (DUF362) L0P85_01885 PF02028 BCCT, betaine/carnitine/choline family transporter L0P85_01890 PF00464 Serine hydroxymethyltransferase L0P85_01925 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_01935 PF00005 ABC transporter L0P85_01935 PF00571 CBS domain L0P85_01940 PF02082 Transcriptional regulator L0P85_01945 PF02915 Rubrerythrin L0P85_01950 PF04397 LytTr DNA-binding domain L0P85_01960 PF01554 MatE L0P85_01965 PF03006 Haemolysin-III related L0P85_01980 PF00155 Aminotransferase class I and II L0P85_01990 PF01066 CDP-alcohol phosphatidyltransferase L0P85_02005 PF01624 MutS domain I L0P85_02005 PF05188 MutS domain II L0P85_02005 PF05192 MutS domain III L0P85_02005 PF05190 MutS family domain IV L0P85_02005 PF00488 MutS domain V L0P85_02010 PF13411 MerR HTH family regulatory protein L0P85_02010 PF07739 TipAS antibiotic-recognition domain L0P85_02015 PF01923 Cobalamin adenosyltransferase L0P85_02020 PF10609 NUBPL iron-transfer P-loop NTPase L0P85_02025 PF02350 UDP-N-acetylglucosamine 2-epimerase L0P85_02030 PF00578 AhpC/TSA family L0P85_02045 PF07495 Y_Y_Y domain L0P85_02045 PF00072 Response regulator receiver domain L0P85_02045 PF07494 Two component regulator propeller L0P85_02045 PF00512 His Kinase A (phospho-acceptor) domain L0P85_02045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_02045 PF12833 Helix-turn-helix domain L0P85_02070 PF03170 Bacterial cellulose synthase subunit L0P85_02100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L0P85_02100 PF03466 LysR substrate binding domain L0P85_02110 PF03466 LysR substrate binding domain L0P85_02110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L0P85_02115 PF02080 TrkA-C domain L0P85_02115 PF06826 Predicted Permease Membrane Region L0P85_02120 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain L0P85_02120 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain L0P85_02125 PF02310 B12 binding domain L0P85_02125 PF01642 Methylmalonyl-CoA mutase L0P85_02130 PF01642 Methylmalonyl-CoA mutase L0P85_02130 PF02310 B12 binding domain L0P85_02155 PF02785 Biotin carboxylase C-terminal domain L0P85_02155 PF00289 Biotin carboxylase, N-terminal domain L0P85_02155 PF00364 Biotin-requiring enzyme L0P85_02155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L0P85_02160 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit L0P85_02165 PF00005 ABC transporter L0P85_02185 PF00072 Response regulator receiver domain L0P85_02185 PF00486 Transcriptional regulatory protein, C terminal L0P85_02195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_02200 PF00005 ABC transporter L0P85_02205 PF02687 FtsX-like permease family L0P85_02215 PF12822 ECF transporter, substrate-specific component L0P85_02225 PF02347 Glycine cleavage system P-protein L0P85_02230 PF02347 Glycine cleavage system P-protein L0P85_02235 PF01699 Sodium/calcium exchanger protein L0P85_02240 PF00072 Response regulator receiver domain L0P85_02240 PF00486 Transcriptional regulatory protein, C terminal L0P85_02245 PF00005 ABC transporter L0P85_02255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_02255 PF00512 His Kinase A (phospho-acceptor) domain L0P85_02260 PF00733 Asparagine synthase L0P85_02260 PF13537 Glutamine amidotransferase domain L0P85_02270 PF01381 Helix-turn-helix L0P85_02275 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain L0P85_02275 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain L0P85_02280 PF00890 FAD binding domain L0P85_02285 PF02445 Quinolinate synthetase A protein L0P85_02290 PF08279 HTH domain L0P85_02290 PF02829 3H domain L0P85_02295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_02295 PF06580 Histidine kinase L0P85_02295 PF07694 5TMR of 5TMR-LYT L0P85_02300 PF04397 LytTr DNA-binding domain L0P85_02300 PF00072 Response regulator receiver domain L0P85_02305 PF02554 Carbon starvation protein CstA L0P85_02310 PF13411 MerR HTH family regulatory protein L0P85_02310 PF06445 GyrI-like small molecule binding domain L0P85_02320 PF03551 Transcriptional regulator PadR-like family L0P85_02335 PF01891 Cobalt uptake substrate-specific transmembrane region L0P85_02340 PF02553 Cobalt transport protein component CbiN L0P85_02345 PF02361 Cobalt transport protein L0P85_02350 PF00005 ABC transporter L0P85_02355 PF07685 CobB/CobQ-like glutamine amidotransferase domain L0P85_02360 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain L0P85_02360 PF07685 CobB/CobQ-like glutamine amidotransferase domain L0P85_02365 PF03186 CobD/Cbib protein L0P85_02370 PF00155 Aminotransferase class I and II L0P85_02375 PF00288 GHMP kinases N terminal domain L0P85_02380 PF02570 Precorrin-8X methylmutase L0P85_02385 PF01888 CbiD L0P85_02390 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L0P85_02395 PF05175 Methyltransferase small domain L0P85_02400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L0P85_02405 PF11761 Cobalamin biosynthesis central region L0P85_02405 PF01890 Cobalamin synthesis G C-terminus L0P85_02405 PF11760 Cobalamin synthesis G N-terminal L0P85_02410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L0P85_02415 PF02571 Precorrin-6x reductase CbiJ/CobK L0P85_02420 PF06180 Cobalt chelatase (CbiK) L0P85_02425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L0P85_02430 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain L0P85_02430 PF03900 Porphobilinogen deaminase, C-terminal domain L0P85_02435 PF02602 Uroporphyrinogen-III synthase HemD L0P85_02435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L0P85_02440 PF00490 Delta-aminolevulinic acid dehydratase L0P85_02450 PF14824 Sirohaem biosynthesis protein central L0P85_02450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases L0P85_02450 PF10414 Sirohaem synthase dimerisation region L0P85_02455 PF08534 Redoxin L0P85_02470 PF04055 Radical SAM superfamily L0P85_02470 PF06968 Biotin and Thiamin Synthesis associated domain L0P85_02485 PF05525 Branched-chain amino acid transport protein L0P85_02515 PF00392 Bacterial regulatory proteins, gntR family L0P85_02515 PF00155 Aminotransferase class I and II L0P85_02520 PF00005 ABC transporter L0P85_02530 PF14310 Fibronectin type III-like domain L0P85_02530 PF00933 Glycosyl hydrolase family 3 N terminal domain L0P85_02530 PF01915 Glycosyl hydrolase family 3 C-terminal domain L0P85_02540 PF04055 Radical SAM superfamily L0P85_02585 PF12849 PBP superfamily domain L0P85_02590 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_02595 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_02600 PF00005 ABC transporter L0P85_02605 PF01895 PhoU domain L0P85_02610 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV L0P85_02620 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_02620 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L0P85_02625 PF00085 Thioredoxin L0P85_02630 PF00877 NlpC/P60 family L0P85_02630 PF08239 Bacterial SH3 domain L0P85_02630 PF01476 LysM domain L0P85_02645 PF02673 Bacitracin resistance protein BacA L0P85_02665 PF01380 SIS domain L0P85_02675 PF08279 HTH domain L0P85_02675 PF05043 Mga helix-turn-helix domain L0P85_02675 PF00874 PRD domain L0P85_02675 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L0P85_02685 PF03608 PTS system enzyme II sorbitol-specific factor L0P85_02690 PF03612 Sorbitol phosphotransferase enzyme II N-terminus L0P85_02690 PF07663 Sorbitol phosphotransferase enzyme II C-terminus L0P85_02700 PF00923 Transaldolase/Fructose-6-phosphate aldolase L0P85_02705 PF02811 PHP domain L0P85_02710 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 L0P85_02710 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) L0P85_02720 PF00266 Aminotransferase class-V L0P85_02725 PF01047 MarR family L0P85_02740 PF13411 MerR HTH family regulatory protein L0P85_02740 PF06445 GyrI-like small molecule binding domain L0P85_02745 PF12850 Calcineurin-like phosphoesterase superfamily domain L0P85_02750 PF01032 FecCD transport family L0P85_02755 PF01032 FecCD transport family L0P85_02760 PF00005 ABC transporter L0P85_02765 PF01497 Periplasmic binding protein L0P85_02775 PF01871 AMMECR1 L0P85_02775 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase L0P85_02785 PF00356 Bacterial regulatory proteins, lacI family L0P85_02790 PF00480 ROK family L0P85_02815 PF09338 Glycine/sarcosine/betaine reductase component B subunits L0P85_02825 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_02830 PF00085 Thioredoxin L0P85_02845 PF02504 Fatty acid synthesis protein L0P85_02850 PF01226 Formate/nitrite transporter L0P85_02860 PF05544 Proline racemase L0P85_02875 PF00664 ABC transporter transmembrane region L0P85_02875 PF00005 ABC transporter L0P85_02880 PF04552 Sigma-54, DNA binding domain L0P85_02880 PF04963 Sigma-54 factor, core binding domain L0P85_02880 PF00309 Sigma-54 factor, Activator interacting domain (AID) L0P85_02885 PF02417 Chromate transporter L0P85_02895 PF17746 SfsA N-terminal OB domain L0P85_02895 PF03749 Sugar fermentation stimulation protein RE domain L0P85_02900 PF00575 S1 RNA binding domain L0P85_02915 PF01434 Peptidase family M41 L0P85_02915 PF00004 ATPase family associated with various cellular activities (AAA) L0P85_02915 PF06480 FtsH Extracellular L0P85_02915 PF17862 AAA+ lid domain L0P85_02925 PF01594 AI-2E family transporter L0P85_02930 PF00266 Aminotransferase class-V L0P85_02935 PF01842 ACT domain L0P85_02935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain L0P85_02935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain L0P85_02945 PF06857 Malonate decarboxylase delta subunit (MdcD) L0P85_02950 PF03328 HpcH/HpaI aldolase/citrate lyase family L0P85_02955 PF04223 Citrate lyase, alpha subunit (CitF) L0P85_02960 PF03390 2-hydroxycarboxylate transporter family L0P85_02975 PF08218 Citrate lyase ligase C-terminal domain L0P85_02980 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase L0P85_02980 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase L0P85_02985 PF07729 FCD domain L0P85_02985 PF00392 Bacterial regulatory proteins, gntR family L0P85_02990 PF02436 Conserved carboxylase domain L0P85_02990 PF00682 HMGL-like L0P85_02990 PF00364 Biotin-requiring enzyme L0P85_03000 PF00682 HMGL-like L0P85_03000 PF02436 Conserved carboxylase domain L0P85_03000 PF00364 Biotin-requiring enzyme L0P85_03005 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit L0P85_03015 PF03551 Transcriptional regulator PadR-like family L0P85_03030 PF00892 EamA-like transporter family L0P85_03040 PF01235 Sodium:alanine symporter family L0P85_03045 PF11842 Domain of unknown function (DUF3362) L0P85_03045 PF08497 Radical SAM N-terminal L0P85_03045 PF04055 Radical SAM superfamily L0P85_03050 PF03616 Sodium/glutamate symporter L0P85_03055 PF01027 Inhibitor of apoptosis-promoting Bax1 L0P85_03060 PF00990 Diguanylate cyclase, GGDEF domain L0P85_03065 PF02608 ABC transporter substrate-binding protein PnrA-like L0P85_03075 PF00005 ABC transporter L0P85_03095 PF12838 4Fe-4S dicluster domain L0P85_03110 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_03115 PF00005 ABC transporter L0P85_03125 PF00557 Metallopeptidase family M24 L0P85_03125 PF01321 Creatinase/Prolidase N-terminal domain L0P85_03130 PF00367 phosphotransferase system, EIIB L0P85_03130 PF02378 Phosphotransferase system, EIIC L0P85_03135 PF02056 Family 4 glycosyl hydrolase L0P85_03135 PF11975 Family 4 glycosyl hydrolase C-terminal domain L0P85_03140 PF01380 SIS domain L0P85_03140 PF01418 Helix-turn-helix domain, rpiR family L0P85_03150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L0P85_03150 PF05043 Mga helix-turn-helix domain L0P85_03150 PF00874 PRD domain L0P85_03150 PF08279 HTH domain L0P85_03155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L0P85_03160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L0P85_03165 PF03611 PTS system sugar-specific permease component L0P85_03180 PF02342 TerD domain L0P85_03185 PF02342 TerD domain L0P85_03190 PF02342 TerD domain L0P85_03195 PF00689 Cation transporting ATPase, C-terminus L0P85_03195 PF00690 Cation transporter/ATPase, N-terminus L0P85_03205 PF05816 Toxic anion resistance protein (TelA) L0P85_03245 PF01266 FAD dependent oxidoreductase L0P85_03250 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_03250 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster L0P85_03265 PF00082 Subtilase family L0P85_03270 PF07690 Major Facilitator Superfamily L0P85_03280 PF01513 ATP-NAD kinase L0P85_03295 PF01479 S4 domain L0P85_03295 PF00163 Ribosomal protein S4/S9 N-terminal domain L0P85_03305 PF00005 ABC transporter L0P85_03315 PF17934 Tetracyclin repressor-like, C-terminal domain L0P85_03315 PF00440 Bacterial regulatory proteins, tetR family L0P85_03345 PF04073 Aminoacyl-tRNA editing domain L0P85_03350 PF04397 LytTr DNA-binding domain L0P85_03350 PF00072 Response regulator receiver domain L0P85_03355 PF00989 PAS fold L0P85_03355 PF17203 Single cache domain 3 L0P85_03355 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain L0P85_03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_03365 PF00005 ABC transporter L0P85_03370 PF03062 MBOAT, membrane-bound O-acyltransferase family L0P85_03385 PF04055 Radical SAM superfamily L0P85_03395 PF05681 Fumarate hydratase (Fumerase) L0P85_03400 PF05683 Fumarase C-terminus L0P85_03400 PF05681 Fumarate hydratase (Fumerase) L0P85_03405 PF00390 Malic enzyme, N-terminal domain L0P85_03405 PF03949 Malic enzyme, NAD binding domain L0P85_03420 PF02558 Ketopantoate reductase PanE/ApbA L0P85_03420 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain L0P85_03425 PF13509 S1 domain L0P85_03425 PF17783 CvfB-like winged helix domain L0P85_03440 PF00485 Phosphoribulokinase / Uridine kinase family L0P85_03455 PF00005 ABC transporter L0P85_03465 PF00072 Response regulator receiver domain L0P85_03465 PF00486 Transcriptional regulatory protein, C terminal L0P85_03470 PF00512 His Kinase A (phospho-acceptor) domain L0P85_03470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_03490 PF01381 Helix-turn-helix L0P85_03495 PF00005 ABC transporter L0P85_03495 PF08402 TOBE domain L0P85_03500 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_03505 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_03510 PF13416 Bacterial extracellular solute-binding protein L0P85_03525 PF00294 pfkB family carbohydrate kinase L0P85_03530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L0P85_03530 PF02378 Phosphotransferase system, EIIC L0P85_03530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L0P85_03535 PF01116 Fructose-bisphosphate aldolase class-II L0P85_03540 PF02906 Iron only hydrogenase large subunit, C-terminal domain L0P85_03540 PF02256 Iron hydrogenase small subunit L0P85_03540 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region L0P85_03540 PF00037 4Fe-4S binding domain L0P85_03575 PF03606 C4-dicarboxylate anaerobic carrier L0P85_03580 PF07687 Peptidase dimerisation domain L0P85_03580 PF01546 Peptidase family M20/M25/M40 L0P85_03585 PF02811 PHP domain L0P85_03590 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 L0P85_03590 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) L0P85_03595 PF02028 BCCT, betaine/carnitine/choline family transporter L0P85_03610 PF13614 AAA domain L0P85_03615 PF02719 Polysaccharide biosynthesis protein L0P85_03620 PF02397 Bacterial sugar transferase L0P85_03635 PF13439 Glycosyltransferase Family 4 L0P85_03635 PF00534 Glycosyl transferases group 1 L0P85_03640 PF00535 Glycosyl transferase family 2 L0P85_03640 PF01501 Glycosyl transferase family 8 L0P85_03645 PF00535 Glycosyl transferase family 2 L0P85_03655 PF12919 TcdA/TcdB catalytic glycosyltransferase domain L0P85_03655 PF12920 TcdA/TcdB pore forming domain L0P85_03655 PF12918 TcdB toxin N-terminal helical domain L0P85_03655 PF11713 Peptidase C80 family L0P85_03655 PF01473 Putative cell wall binding repeat L0P85_03660 PF02350 UDP-N-acetylglucosamine 2-epimerase L0P85_03685 PF00149 Calcineurin-like phosphoesterase L0P85_03700 PF03023 Lipid II flippase MurJ L0P85_03745 PF00664 ABC transporter transmembrane region L0P85_03745 PF00005 ABC transporter L0P85_03775 PF01483 Proprotein convertase P-domain L0P85_03775 PF04389 Peptidase family M28 L0P85_03780 PF03816 Cell envelope-related transcriptional attenuator domain L0P85_03830 PF00196 Bacterial regulatory proteins, luxR family L0P85_03830 PF00072 Response regulator receiver domain L0P85_03835 PF13426 PAS domain L0P85_03835 PF13188 PAS domain L0P85_03835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_03835 PF00512 His Kinase A (phospho-acceptor) domain L0P85_03835 PF00989 PAS fold L0P85_03840 PF00158 Sigma-54 interaction domain L0P85_03840 PF00072 Response regulator receiver domain L0P85_03840 PF02954 Bacterial regulatory protein, Fis family L0P85_03895 PF02463 RecF/RecN/SMC N terminal domain L0P85_03905 PF00149 Calcineurin-like phosphoesterase L0P85_03910 PF02706 Chain length determinant protein L0P85_03910 PF13807 G-rich domain on putative tyrosine kinase L0P85_03915 PF13614 AAA domain L0P85_03920 PF02397 Bacterial sugar transferase L0P85_03925 PF02350 UDP-N-acetylglucosamine 2-epimerase L0P85_03930 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain L0P85_03930 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain L0P85_03930 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain L0P85_03955 PF04230 Polysaccharide pyruvyl transferase L0P85_03960 PF03023 Lipid II flippase MurJ L0P85_03965 PF00483 Nucleotidyl transferase L0P85_03970 PF16363 GDP-mannose 4,6 dehydratase L0P85_03995 PF03169 OPT oligopeptide transporter protein L0P85_04005 PF00005 ABC transporter L0P85_04005 PF12558 ATP-binding cassette cobalt transporter L0P85_04010 PF07155 ECF-type riboflavin transporter, S component L0P85_04020 PF03816 Cell envelope-related transcriptional attenuator domain L0P85_04040 PF13520 Amino acid permease L0P85_04060 PF03734 L,D-transpeptidase catalytic domain L0P85_04075 PF00574 Clp protease L0P85_04080 PF00877 NlpC/P60 family L0P85_04085 PF02645 Uncharacterised protein, DegV family COG1307 L0P85_04090 PF08448 PAS fold L0P85_04090 PF00990 Diguanylate cyclase, GGDEF domain L0P85_04105 PF01497 Periplasmic binding protein L0P85_04110 PF01032 FecCD transport family L0P85_04115 PF00005 ABC transporter L0P85_04120 PF17863 AAA lid domain L0P85_04120 PF01078 Magnesium chelatase, subunit ChlI L0P85_04125 PF07728 AAA domain (dynein-related subfamily) L0P85_04125 PF17863 AAA lid domain L0P85_04125 PF13519 von Willebrand factor type A domain L0P85_04130 PF02514 CobN/Magnesium Chelatase L0P85_04130 PF11965 Domain of unknown function (DUF3479) L0P85_04145 PF00005 ABC transporter L0P85_04145 PF12558 ATP-binding cassette cobalt transporter L0P85_04150 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_04150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L0P85_04155 PF10609 NUBPL iron-transfer P-loop NTPase L0P85_04165 PF10609 NUBPL iron-transfer P-loop NTPase L0P85_04185 PF02001 Protein of unknown function DUF134 L0P85_04205 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain L0P85_04205 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain L0P85_04210 PF00205 Thiamine pyrophosphate enzyme, central domain L0P85_04210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L0P85_04210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain L0P85_04225 PF02645 Uncharacterised protein, DegV family COG1307 L0P85_04230 PF03006 Haemolysin-III related L0P85_04245 PF01661 Macro domain L0P85_04255 PF01693 Caulimovirus viroplasmin L0P85_04260 PF00155 Aminotransferase class I and II L0P85_04265 PF00156 Phosphoribosyl transferase domain L0P85_04270 PF01569 PAP2 superfamily L0P85_04280 PF00269 Small, acid-soluble spore proteins, alpha/beta type L0P85_04285 PF02659 Putative manganese efflux pump L0P85_04320 PF13426 PAS domain L0P85_04320 PF02954 Bacterial regulatory protein, Fis family L0P85_04320 PF00158 Sigma-54 interaction domain L0P85_04340 PF16552 D-ornithine 4,5-aminomutase alpha-subunit L0P85_04345 PF02310 B12 binding domain L0P85_04345 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit L0P85_04345 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase L0P85_04350 PF13941 MutL protein L0P85_04355 PF01168 Alanine racemase, N-terminal domain L0P85_04360 PF01235 Sodium:alanine symporter family L0P85_04365 PF01546 Peptidase family M20/M25/M40 L0P85_04370 PF03553 Na+/H+ antiporter family L0P85_04375 PF01264 Chorismate synthase L0P85_04380 PF01761 3-dehydroquinate synthase L0P85_04385 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L0P85_04390 PF06130 Phosphate propanoyltransferase L0P85_04395 PF01791 DeoC/LacD family aldolase L0P85_04410 PF02463 RecF/RecN/SMC N terminal domain L0P85_04420 PF01047 MarR family L0P85_04440 PF04023 FeoA domain L0P85_04445 PF07670 Nucleoside recognition L0P85_04445 PF17910 FeoB cytosolic helical domain L0P85_04445 PF07664 Ferrous iron transport protein B C terminus L0P85_04445 PF04023 FeoA domain L0P85_04445 PF02421 Ferrous iron transport protein B L0P85_04455 PF06874 Firmicute fructose-1,6-bisphosphatase L0P85_04460 PF01464 Transglycosylase SLT domain L0P85_04470 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term L0P85_04485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L0P85_04485 PF00460 Flagella basal body rod protein L0P85_04495 PF02623 FliW protein L0P85_04500 PF02599 Global regulator protein family L0P85_04510 PF07195 Flagellar hook-associated protein 2 C-terminus L0P85_04510 PF02465 Flagellar hook-associated protein 2 N-terminus L0P85_04520 PF00700 Bacterial flagellin C-terminal helical region L0P85_04520 PF00669 Bacterial flagellin N-terminal helical region L0P85_04525 PF00535 Glycosyl transferase family 2 L0P85_04525 PF13181 Tetratricopeptide repeat L0P85_04555 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase L0P85_04560 PF01467 Cytidylyltransferase-like L0P85_04570 PF00535 Glycosyl transferase family 2 L0P85_04595 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family L0P85_04610 PF00483 Nucleotidyl transferase L0P85_04615 PF16363 GDP-mannose 4,6 dehydratase L0P85_04625 PF07559 Flagellar basal body protein FlaE L0P85_04625 PF00460 Flagella basal body rod protein L0P85_04625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L0P85_04630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L0P85_04630 PF00460 Flagella basal body rod protein L0P85_04635 PF02049 Flagellar hook-basal body complex protein FliE L0P85_04640 PF01514 Secretory protein of YscJ/FliF family L0P85_04640 PF08345 Flagellar M-ring protein C-terminal L0P85_04645 PF01706 FliG C-terminal domain L0P85_04645 PF14841 FliG middle domain L0P85_04645 PF14842 FliG N-terminal domain L0P85_04655 PF02874 ATP synthase alpha/beta family, beta-barrel domain L0P85_04655 PF18269 T3SS EscN ATPase C-terminal domain L0P85_04655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain L0P85_04675 PF00460 Flagella basal body rod protein L0P85_04675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L0P85_04680 PF01618 MotA/TolQ/ExbB proton channel family L0P85_04685 PF13677 Membrane MotB of proton-channel complex MotA/MotB L0P85_04685 PF00691 OmpA family L0P85_04695 PF00813 FliP family L0P85_04700 PF01313 Bacterial export proteins, family 3 L0P85_04705 PF01312 FlhB HrpN YscU SpaS Family L0P85_04710 PF00771 FHIPEP family L0P85_04715 PF04542 Sigma-70 region 2 L0P85_04715 PF04539 Sigma-70 region 3 L0P85_04715 PF04545 Sigma-70, region 4 L0P85_04720 PF00460 Flagella basal body rod protein L0P85_04720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L0P85_04725 PF00460 Flagella basal body rod protein L0P85_04725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal L0P85_04730 PF02154 Flagellar motor switch protein FliM L0P85_04730 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term L0P85_04735 PF04509 CheC-like family L0P85_04735 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term L0P85_04750 PF02203 Tar ligand binding domain homologue L0P85_04750 PF00672 HAMP domain L0P85_04750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L0P85_04755 PF01584 CheW-like domain L0P85_04755 PF02895 Signal transducing histidine kinase, homodimeric domain L0P85_04755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_04755 PF07194 P2 response regulator binding domain L0P85_04755 PF01627 Hpt domain L0P85_04760 PF01339 CheB methylesterase L0P85_04760 PF00072 Response regulator receiver domain L0P85_04765 PF04509 CheC-like family L0P85_04770 PF03975 CheD chemotactic sensory transduction L0P85_04775 PF01584 CheW-like domain L0P85_04780 PF03705 CheR methyltransferase, all-alpha domain L0P85_04780 PF01739 CheR methyltransferase, SAM binding domain L0P85_04785 PF00072 Response regulator receiver domain L0P85_04795 PF01177 Asp/Glu/Hydantoin racemase L0P85_04800 PF01225 Mur ligase family, catalytic domain L0P85_04800 PF02875 Mur ligase family, glutamate ligase domain L0P85_04800 PF08245 Mur ligase middle domain L0P85_04810 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain L0P85_04810 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase L0P85_04810 PF00111 2Fe-2S iron-sulfur cluster binding domain L0P85_04810 PF01799 [2Fe-2S] binding domain L0P85_04835 PF13478 XdhC Rossmann domain L0P85_04835 PF02625 XdhC and CoxI family L0P85_04840 PF12804 MobA-like NTP transferase domain L0P85_04845 PF00266 Aminotransferase class-V L0P85_04855 PF06463 Molybdenum Cofactor Synthesis C L0P85_04855 PF04055 Radical SAM superfamily L0P85_04860 PF00501 AMP-binding enzyme L0P85_04860 PF14535 AMP-binding enzyme C-terminal domain L0P85_04880 PF00512 His Kinase A (phospho-acceptor) domain L0P85_04880 PF00989 PAS fold L0P85_04880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_04885 PF01497 Periplasmic binding protein L0P85_04890 PF01032 FecCD transport family L0P85_04895 PF01032 FecCD transport family L0P85_04905 PF01554 MatE L0P85_04910 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_04915 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_04915 PF12911 N-terminal TM domain of oligopeptide transport permease C L0P85_04920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L0P85_04920 PF00005 ABC transporter L0P85_04925 PF00005 ABC transporter L0P85_04925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L0P85_04930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L0P85_04940 PF02811 PHP domain L0P85_04940 PF01336 OB-fold nucleic acid binding domain L0P85_04940 PF00929 Exonuclease L0P85_04940 PF14579 Helix-hairpin-helix motif L0P85_04940 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L0P85_04940 PF07733 Bacterial DNA polymerase III alpha NTPase domain L0P85_04940 PF11490 DNA polymerase III polC-type N-terminus II L0P85_04950 PF01554 MatE L0P85_04955 PF00376 MerR family regulatory protein L0P85_04955 PF09278 MerR, DNA binding L0P85_04965 PF03063 Prismane/CO dehydrogenase family L0P85_04975 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_04975 PF18267 Rubredoxin NAD+ reductase C-terminal domain L0P85_04985 PF06580 Histidine kinase L0P85_04985 PF00672 HAMP domain L0P85_04985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_04985 PF02743 Cache domain L0P85_04990 PF12833 Helix-turn-helix domain L0P85_04990 PF00072 Response regulator receiver domain L0P85_04995 PF02608 ABC transporter substrate-binding protein PnrA-like L0P85_05000 PF02885 Glycosyl transferase family, helical bundle domain L0P85_05000 PF00591 Glycosyl transferase family, a/b domain L0P85_05000 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain L0P85_05005 PF01791 DeoC/LacD family aldolase L0P85_05015 PF01773 Na+ dependent nucleoside transporter N-terminus L0P85_05015 PF07670 Nucleoside recognition L0P85_05015 PF07662 Na+ dependent nucleoside transporter C-terminus L0P85_05020 PF01048 Phosphorylase superfamily L0P85_05040 PF01227 GTP cyclohydrolase I L0P85_05045 PF00809 Pterin binding enzyme L0P85_05050 PF02152 Dihydroneopterin aldolase L0P85_05055 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) L0P85_05060 PF01554 MatE L0P85_05065 PF02583 Metal-sensitive transcriptional repressor L0P85_05070 PF01476 LysM domain L0P85_05070 PF06725 3D domain L0P85_05075 PF05525 Branched-chain amino acid transport protein L0P85_05080 PF01773 Na+ dependent nucleoside transporter N-terminus L0P85_05080 PF07662 Na+ dependent nucleoside transporter C-terminus L0P85_05080 PF07670 Nucleoside recognition L0P85_05100 PF03734 L,D-transpeptidase catalytic domain L0P85_05105 PF02397 Bacterial sugar transferase L0P85_05110 PF00535 Glycosyl transferase family 2 L0P85_05115 PF00877 NlpC/P60 family L0P85_05125 PF12671 Putative amidase domain L0P85_05130 PF01520 N-acetylmuramoyl-L-alanine amidase L0P85_05130 PF11741 AMIN domain L0P85_05145 PF05067 Manganese containing catalase L0P85_05160 PF01171 PP-loop family L0P85_05165 PF14480 DNA polymerase III polC-type N-terminus I L0P85_05165 PF11490 DNA polymerase III polC-type N-terminus II L0P85_05165 PF07733 Bacterial DNA polymerase III alpha NTPase domain L0P85_05165 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L0P85_05165 PF14579 Helix-hairpin-helix motif L0P85_05165 PF02811 PHP domain L0P85_05165 PF00929 Exonuclease L0P85_05180 PF00082 Subtilase family L0P85_05185 PF00005 ABC transporter L0P85_05190 PF02687 FtsX-like permease family L0P85_05190 PF18075 FtsX extracellular domain L0P85_05195 PF01551 Peptidase family M23 L0P85_05200 PF07733 Bacterial DNA polymerase III alpha NTPase domain L0P85_05200 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L0P85_05200 PF14579 Helix-hairpin-helix motif L0P85_05200 PF02811 PHP domain L0P85_05200 PF00929 Exonuclease L0P85_05210 PF03793 PASTA domain L0P85_05210 PF00069 Protein kinase domain L0P85_05220 PF00905 Penicillin binding protein transpeptidase domain L0P85_05220 PF00912 Transglycosylase L0P85_05260 PF00155 Aminotransferase class I and II L0P85_05275 PF09861 Lactate racemase N-terminal domain L0P85_05285 PF00581 Rhodanese-like domain L0P85_05290 PF00535 Glycosyl transferase family 2 L0P85_05320 PF02687 FtsX-like permease family L0P85_05320 PF12704 MacB-like periplasmic core domain L0P85_05325 PF00005 ABC transporter L0P85_05335 PF09335 SNARE associated Golgi protein L0P85_05345 PF13416 Bacterial extracellular solute-binding protein L0P85_05350 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_05355 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_05360 PF08402 TOBE domain L0P85_05360 PF00005 ABC transporter L0P85_05375 PF04607 Region found in RelA / SpoT proteins L0P85_05385 PF00565 Staphylococcal nuclease homologue L0P85_05395 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein L0P85_05395 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus L0P85_05400 PF04542 Sigma-70 region 2 L0P85_05400 PF08281 Sigma-70, region 4 L0P85_05410 PF01975 Survival protein SurE L0P85_05415 PF02535 ZIP Zinc transporter L0P85_05420 PF03466 LysR substrate binding domain L0P85_05420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L0P85_05425 PF00881 Nitroreductase family L0P85_05435 PF04055 Radical SAM superfamily L0P85_05440 PF10437 Bacterial lipoate protein ligase C-terminus L0P85_05440 PF03099 Biotin/lipoate A/B protein ligase family L0P85_05445 PF00248 Aldo/keto reductase family L0P85_05465 PF01131 DNA topoisomerase L0P85_05465 PF01751 Toprim domain L0P85_05470 PF05043 Mga helix-turn-helix domain L0P85_05470 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L0P85_05470 PF00874 PRD domain L0P85_05470 PF08279 HTH domain L0P85_05475 PF00294 pfkB family carbohydrate kinase L0P85_05480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L0P85_05480 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L0P85_05485 PF00392 Bacterial regulatory proteins, gntR family L0P85_05485 PF07702 UTRA domain L0P85_05490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit L0P85_05495 PF02378 Phosphotransferase system, EIIC L0P85_05500 PF02056 Family 4 glycosyl hydrolase L0P85_05500 PF11975 Family 4 glycosyl hydrolase C-terminal domain L0P85_05505 PF04794 YdjC-like protein L0P85_05510 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit L0P85_05515 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase L0P85_05520 PF01979 Amidohydrolase family L0P85_05525 PF00392 Bacterial regulatory proteins, gntR family L0P85_05525 PF07702 UTRA domain L0P85_05530 PF00355 Rieske [2Fe-2S] domain L0P85_05530 PF01266 FAD dependent oxidoreductase L0P85_05540 PF07883 Cupin domain L0P85_05570 PF00082 Subtilase family L0P85_05570 PF02225 PA domain L0P85_05570 PF06280 Fn3-like domain L0P85_05575 PF02225 PA domain L0P85_05575 PF13860 FlgD Ig-like domain L0P85_05575 PF05922 Peptidase inhibitor I9 L0P85_05575 PF00082 Subtilase family L0P85_05585 PF01336 OB-fold nucleic acid binding domain L0P85_05585 PF00152 tRNA synthetases class II (D, K and N) L0P85_05590 PF05922 Peptidase inhibitor I9 L0P85_05590 PF13860 FlgD Ig-like domain L0P85_05590 PF00082 Subtilase family L0P85_05590 PF02225 PA domain L0P85_05595 PF02225 PA domain L0P85_05595 PF06280 Fn3-like domain L0P85_05595 PF00082 Subtilase family L0P85_05600 PF05922 Peptidase inhibitor I9 L0P85_05600 PF13860 FlgD Ig-like domain L0P85_05600 PF00082 Subtilase family L0P85_05600 PF02225 PA domain L0P85_05605 PF13860 FlgD Ig-like domain L0P85_05605 PF00082 Subtilase family L0P85_05605 PF02225 PA domain L0P85_05605 PF05922 Peptidase inhibitor I9 L0P85_05605 PF05922 Peptidase inhibitor I9 L0P85_05605 PF02225 PA domain L0P85_05605 PF00082 Subtilase family L0P85_05605 PF13860 FlgD Ig-like domain L0P85_05610 PF01734 Patatin-like phospholipase L0P85_05645 PF01967 MoaC family L0P85_05650 PF04073 Aminoacyl-tRNA editing domain L0P85_05655 PF02272 DHHA1 domain L0P85_05655 PF01411 tRNA synthetases class II (A) L0P85_05655 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L0P85_05670 PF00795 Carbon-nitrogen hydrolase L0P85_05675 PF01641 SelR domain L0P85_05675 PF01625 Peptide methionine sulfoxide reductase L0P85_05685 PF06725 3D domain L0P85_05685 PF01476 LysM domain L0P85_05690 PF06725 3D domain L0P85_05690 PF01476 LysM domain L0P85_05715 PF04294 VanW like protein L0P85_05725 PF01594 AI-2E family transporter L0P85_05735 PF01235 Sodium:alanine symporter family L0P85_05760 PF02028 BCCT, betaine/carnitine/choline family transporter L0P85_05765 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_05770 PF00085 Thioredoxin L0P85_05780 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III L0P85_05805 PF07943 Penicillin-binding protein 5, C-terminal domain L0P85_05805 PF00768 D-alanyl-D-alanine carboxypeptidase L0P85_05810 PF00318 Ribosomal protein S2 L0P85_05815 PF00889 Elongation factor TS L0P85_05820 PF00696 Amino acid kinase family L0P85_05825 PF01765 Ribosome recycling factor L0P85_05835 PF01255 Putative undecaprenyl diphosphate synthase L0P85_05850 PF00665 Integrase core domain L0P85_05850 PF13276 HTH-like domain L0P85_05850 PF13333 Integrase core domain L0P85_05855 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain L0P85_05855 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase L0P85_05855 PF13288 DXP reductoisomerase C-terminal domain L0P85_05860 PF17820 PDZ domain L0P85_05860 PF02163 Peptidase family M50 L0P85_05865 PF04551 GcpE protein L0P85_05870 PF00571 CBS domain L0P85_05870 PF00005 ABC transporter L0P85_05875 PF04069 Substrate binding domain of ABC-type glycine betaine transport system L0P85_05880 PF00317 Ribonucleotide reductase, all-alpha domain L0P85_05880 PF02867 Ribonucleotide reductase, barrel domain L0P85_05880 PF03477 ATP cone domain L0P85_05885 PF06968 Biotin and Thiamin Synthesis associated domain L0P85_05885 PF04055 Radical SAM superfamily L0P85_05895 PF09383 NIL domain L0P85_05895 PF00005 ABC transporter L0P85_05900 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_05905 PF03180 NLPA lipoprotein L0P85_05915 PF02245 Methylpurine-DNA glycosylase (MPG) L0P85_05920 PF03807 NADP oxidoreductase coenzyme F420-dependent L0P85_05920 PF14748 Pyrroline-5-carboxylate reductase dimerisation L0P85_05925 PF06207 Protein of unknown function (DUF1002) L0P85_05935 PF04539 Sigma-70 region 3 L0P85_05935 PF04545 Sigma-70, region 4 L0P85_05935 PF03979 Sigma-70 factor, region 1.1 L0P85_05935 PF00140 Sigma-70 factor, region 1.2 L0P85_05935 PF04542 Sigma-70 region 2 L0P85_05945 PF03466 LysR substrate binding domain L0P85_05945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L0P85_05950 PF04101 Glycosyltransferase family 28 C-terminal domain L0P85_05950 PF03033 Glycosyltransferase family 28 N-terminal domain L0P85_05955 PF01522 Polysaccharide deacetylase L0P85_05965 PF00486 Transcriptional regulatory protein, C terminal L0P85_05965 PF00072 Response regulator receiver domain L0P85_05970 PF00672 HAMP domain L0P85_05970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_05970 PF00512 His Kinase A (phospho-acceptor) domain L0P85_05985 PF07664 Ferrous iron transport protein B C terminus L0P85_05985 PF17910 FeoB cytosolic helical domain L0P85_05985 PF02421 Ferrous iron transport protein B L0P85_05985 PF07670 Nucleoside recognition L0P85_06000 PF01225 Mur ligase family, catalytic domain L0P85_06000 PF02875 Mur ligase family, glutamate ligase domain L0P85_06000 PF08245 Mur ligase middle domain L0P85_06005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L0P85_06005 PF03466 LysR substrate binding domain L0P85_06015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L0P85_06020 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_06025 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_06025 PF12911 N-terminal TM domain of oligopeptide transport permease C L0P85_06030 PF00005 ABC transporter L0P85_06035 PF00005 ABC transporter L0P85_06040 PF00226 DnaJ domain L0P85_06040 PF00684 DnaJ central domain L0P85_06040 PF01556 DnaJ C terminal domain L0P85_06070 PF00497 Bacterial extracellular solute-binding proteins, family 3 L0P85_06075 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_06080 PF00005 ABC transporter L0P85_06085 PF08220 DeoR-like helix-turn-helix domain L0P85_06085 PF00455 DeoR C terminal sensor domain L0P85_06090 PF17042 Nucleotide-binding C-terminal domain L0P85_06090 PF07005 Sugar-binding N-terminal domain L0P85_06095 PF04166 Pyridoxal phosphate biosynthetic protein PdxA L0P85_06100 PF02447 GntP family permease L0P85_06105 PF02901 Pyruvate formate lyase-like L0P85_06105 PF01228 Glycine radical L0P85_06110 PF01053 Cys/Met metabolism PLP-dependent enzyme L0P85_06115 PF00465 Iron-containing alcohol dehydrogenase L0P85_06120 PF08220 DeoR-like helix-turn-helix domain L0P85_06120 PF00455 DeoR C terminal sensor domain L0P85_06125 PF00596 Class II Aldolase and Adducin N-terminal domain L0P85_06135 PF01636 Phosphotransferase enzyme family L0P85_06170 PF06496 Protein of unknown function (DUF1097) L0P85_06175 PF01979 Amidohydrolase family L0P85_06180 PF01546 Peptidase family M20/M25/M40 L0P85_06185 PF00356 Bacterial regulatory proteins, lacI family L0P85_06190 PF01180 Dihydroorotate dehydrogenase L0P85_06195 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_06195 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster L0P85_06200 PF01180 Dihydroorotate dehydrogenase L0P85_06205 PF02770 Acyl-CoA dehydrogenase, middle domain L0P85_06205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain L0P85_06205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain L0P85_06210 PF01012 Electron transfer flavoprotein domain L0P85_06215 PF00766 Electron transfer flavoprotein FAD-binding domain L0P85_06215 PF01012 Electron transfer flavoprotein domain L0P85_06220 PF05525 Branched-chain amino acid transport protein L0P85_06235 PF02515 CoA-transferase family III L0P85_06250 PF04397 LytTr DNA-binding domain L0P85_06250 PF00072 Response regulator receiver domain L0P85_06265 PF05525 Branched-chain amino acid transport protein L0P85_06275 PF00654 Voltage gated chloride channel L0P85_06280 PF13520 Amino acid permease L0P85_06285 PF00990 Diguanylate cyclase, GGDEF domain L0P85_06285 PF17158 Membrane-associated sensor, integral membrane domain L0P85_06300 PF03459 TOBE domain L0P85_06300 PF00005 ABC transporter L0P85_06320 PF01367 5'-3' exonuclease, C-terminal SAM fold L0P85_06320 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L0P85_06320 PF00476 DNA polymerase family A L0P85_06370 PF00571 CBS domain L0P85_06380 PF06803 Protein of unknown function (DUF1232) L0P85_06390 PF07070 SpoOM protein L0P85_06395 PF00571 CBS domain L0P85_06445 PF08671 Anti-repressor SinI L0P85_06445 PF01381 Helix-turn-helix L0P85_06480 PF12833 Helix-turn-helix domain L0P85_06480 PF02311 AraC-like ligand binding domain L0P85_06495 PF00005 ABC transporter L0P85_06510 PF09962 Uncharacterized conserved protein (DUF2196) L0P85_06525 PF12697 Alpha/beta hydrolase family L0P85_06530 PF13419 Haloacid dehalogenase-like hydrolase L0P85_06540 PF06445 GyrI-like small molecule binding domain L0P85_06540 PF13411 MerR HTH family regulatory protein L0P85_06545 PF01980 tRNA-methyltransferase O L0P85_06545 PF18389 TrmO C-terminal domain L0P85_06560 PF01638 HxlR-like helix-turn-helix L0P85_06565 PF00990 Diguanylate cyclase, GGDEF domain L0P85_06565 PF03707 Bacterial signalling protein N terminal repeat L0P85_06565 PF00563 EAL domain L0P85_06610 PF05816 Toxic anion resistance protein (TelA) L0P85_06615 PF01381 Helix-turn-helix L0P85_06625 PF18665 Tetracyclin repressor-like, C-terminal domain L0P85_06625 PF00440 Bacterial regulatory proteins, tetR family L0P85_06640 PF07739 TipAS antibiotic-recognition domain L0P85_06640 PF13411 MerR HTH family regulatory protein L0P85_06650 PF01244 Membrane dipeptidase (Peptidase family M19) L0P85_06655 PF05684 Protein of unknown function (DUF819) L0P85_06665 PF02464 Competence-damaged protein L0P85_06665 PF18146 Damage-inducible protein CinA KH domain L0P85_06665 PF00994 Probable molybdopterin binding domain L0P85_06680 PF01965 DJ-1/PfpI family L0P85_06685 PF00805 Pentapeptide repeats (8 copies) L0P85_06690 PF00158 Sigma-54 interaction domain L0P85_06690 PF13188 PAS domain L0P85_06690 PF02954 Bacterial regulatory protein, Fis family L0P85_06710 PF00005 ABC transporter L0P85_06715 PF04055 Radical SAM superfamily L0P85_06715 PF16199 Radical_SAM C-terminal domain L0P85_06725 PF04294 VanW like protein L0P85_06730 PF00923 Transaldolase/Fructose-6-phosphate aldolase L0P85_06760 PF00664 ABC transporter transmembrane region L0P85_06760 PF00005 ABC transporter L0P85_06765 PF00258 Flavodoxin L0P85_06770 PF00581 Rhodanese-like domain L0P85_06780 PF00854 POT family L0P85_06785 PF00082 Subtilase family L0P85_06790 PF00005 ABC transporter L0P85_06795 PF12679 ABC-2 family transporter protein L0P85_06810 PF12437 Glutamine synthetase type III N terminal L0P85_06810 PF00120 Glutamine synthetase, catalytic domain L0P85_06810 PF18318 Glutamine synthetase C-terminal domain L0P85_06830 PF13411 MerR HTH family regulatory protein L0P85_06830 PF06445 GyrI-like small molecule binding domain L0P85_06845 PF01522 Polysaccharide deacetylase L0P85_06850 PF13307 Helicase C-terminal domain L0P85_06850 PF04851 Type III restriction enzyme, res subunit L0P85_06850 PF00929 Exonuclease L0P85_06865 PF01699 Sodium/calcium exchanger protein L0P85_06875 PF00041 Fibronectin type III domain L0P85_06875 PF00704 Glycosyl hydrolases family 18 L0P85_06925 PF01381 Helix-turn-helix L0P85_06935 PF10548 P22AR C-terminal domain L0P85_06935 PF08346 AntA/AntB antirepressor L0P85_06980 PF00436 Single-strand binding protein family L0P85_07045 PF10668 Phage terminase small subunit L0P85_07150 PF01742 Clostridial neurotoxin zinc protease L0P85_07150 PF07951 Clostridium neurotoxin, C-terminal receptor binding L0P85_07150 PF07953 Clostridium neurotoxin, N-terminal receptor binding L0P85_07150 PF07952 Clostridium neurotoxin, Translocation domain L0P85_07195 PF12833 Helix-turn-helix domain L0P85_07195 PF06445 GyrI-like small molecule binding domain L0P85_07205 PF10417 C-terminal domain of 1-Cys peroxiredoxin L0P85_07205 PF00578 AhpC/TSA family L0P85_07225 PF04294 VanW like protein L0P85_07260 PF01522 Polysaccharide deacetylase L0P85_07275 PF00394 Multicopper oxidase L0P85_07275 PF07731 Multicopper oxidase L0P85_07275 PF07732 Multicopper oxidase L0P85_07285 PF10410 DnaB-helicase binding domain of primase L0P85_07285 PF08275 DNA primase catalytic core, N-terminal domain L0P85_07285 PF01807 CHC2 zinc finger L0P85_07295 PF03979 Sigma-70 factor, region 1.1 L0P85_07295 PF00140 Sigma-70 factor, region 1.2 L0P85_07295 PF04542 Sigma-70 region 2 L0P85_07295 PF04539 Sigma-70 region 3 L0P85_07295 PF04545 Sigma-70, region 4 L0P85_07300 PF04816 tRNA (adenine(22)-N(1))-methyltransferase L0P85_07305 PF01784 NIF3 (NGG1p interacting factor 3) L0P85_07310 PF17099 Tryptophan transporter TrpP L0P85_07315 PF12838 4Fe-4S dicluster domain L0P85_07315 PF13486 Reductive dehalogenase subunit L0P85_07330 PF00842 Alanine racemase, C-terminal domain L0P85_07330 PF01168 Alanine racemase, N-terminal domain L0P85_07330 PF01757 Acyltransferase family L0P85_07345 PF02659 Putative manganese efflux pump L0P85_07350 PF02915 Rubrerythrin L0P85_07360 PF02686 Glu-tRNAGln amidotransferase C subunit L0P85_07365 PF01425 Amidase L0P85_07370 PF02637 GatB domain L0P85_07370 PF02934 GatB/GatE catalytic domain L0P85_07375 PF13091 PLD-like domain L0P85_07380 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain L0P85_07380 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain L0P85_07385 PF00924 Mechanosensitive ion channel L0P85_07385 PF05552 Conserved TM helix L0P85_07390 PF09335 SNARE associated Golgi protein L0P85_07395 PF10437 Bacterial lipoate protein ligase C-terminus L0P85_07395 PF03099 Biotin/lipoate A/B protein ligase family L0P85_07405 PF03553 Na+/H+ antiporter family L0P85_07410 PF00899 ThiF family L0P85_07415 PF03553 Na+/H+ antiporter family L0P85_07420 PF03553 Na+/H+ antiporter family L0P85_07440 PF00465 Iron-containing alcohol dehydrogenase L0P85_07460 PF14268 YoaP-like L0P85_07460 PF00583 Acetyltransferase (GNAT) family L0P85_07485 PF06725 3D domain L0P85_07485 PF01476 LysM domain L0P85_07490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L0P85_07490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L0P85_07490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L0P85_07490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L0P85_07500 PF03631 Virulence factor BrkB L0P85_07505 PF03447 Homoserine dehydrogenase, NAD binding domain L0P85_07505 PF01842 ACT domain L0P85_07505 PF00742 Homoserine dehydrogenase L0P85_07515 PF00815 Histidinol dehydrogenase L0P85_07530 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain L0P85_07530 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain L0P85_07550 PF01554 MatE L0P85_07555 PF01869 BadF/BadG/BcrA/BcrD ATPase family L0P85_07565 PF03960 ArsC family L0P85_07570 PF00392 Bacterial regulatory proteins, gntR family L0P85_07575 PF00005 ABC transporter L0P85_07575 PF13732 Domain of unknown function (DUF4162) L0P85_07585 PF13520 Amino acid permease L0P85_07590 PF13520 Amino acid permease L0P85_07595 PF01168 Alanine racemase, N-terminal domain L0P85_07595 PF00842 Alanine racemase, C-terminal domain L0P85_07600 PF02540 NAD synthase L0P85_07605 PF02926 THUMP domain L0P85_07605 PF01170 Putative RNA methylase family UPF0020 L0P85_07625 PF00486 Transcriptional regulatory protein, C terminal L0P85_07625 PF00072 Response regulator receiver domain L0P85_07630 PF16736 Single Cache-like L0P85_07630 PF00989 PAS fold L0P85_07630 PF00512 His Kinase A (phospho-acceptor) domain L0P85_07630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_07640 PF13439 Glycosyltransferase Family 4 L0P85_07640 PF00534 Glycosyl transferases group 1 L0P85_07645 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L0P85_07650 PF01156 Inosine-uridine preferring nucleoside hydrolase L0P85_07665 PF02645 Uncharacterised protein, DegV family COG1307 L0P85_07670 PF00301 Rubredoxin L0P85_07675 PF07729 FCD domain L0P85_07675 PF00392 Bacterial regulatory proteins, gntR family L0P85_07680 PF02652 L-lactate permease L0P85_07685 PF09861 Lactate racemase N-terminal domain L0P85_07700 PF00766 Electron transfer flavoprotein FAD-binding domain L0P85_07700 PF01012 Electron transfer flavoprotein domain L0P85_07705 PF02913 FAD linked oxidases, C-terminal domain L0P85_07705 PF01565 FAD binding domain L0P85_07715 PF01546 Peptidase family M20/M25/M40 L0P85_07715 PF07687 Peptidase dimerisation domain L0P85_07720 PF03806 AbgT putative transporter family L0P85_07725 PF01546 Peptidase family M20/M25/M40 L0P85_07725 PF07687 Peptidase dimerisation domain L0P85_07735 PF00488 MutS domain V L0P85_07735 PF05192 MutS domain III L0P85_07735 PF05188 MutS domain II L0P85_07735 PF05190 MutS family domain IV L0P85_07735 PF01624 MutS domain I L0P85_07740 PF01381 Helix-turn-helix L0P85_07745 PF04055 Radical SAM superfamily L0P85_07750 PF02901 Pyruvate formate lyase-like L0P85_07750 PF01228 Glycine radical L0P85_07755 PF14748 Pyrroline-5-carboxylate reductase dimerisation L0P85_07755 PF03807 NADP oxidoreductase coenzyme F420-dependent L0P85_07760 PF06865 Pyrimidine/purine nucleoside phosphorylase L0P85_07775 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 L0P85_07775 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) L0P85_07795 PF04205 FMN-binding domain L0P85_07795 PF00890 FAD binding domain L0P85_07805 PF00665 Integrase core domain L0P85_07805 PF13276 HTH-like domain L0P85_07805 PF13333 Integrase core domain L0P85_07820 PF13188 PAS domain L0P85_07820 PF02954 Bacterial regulatory protein, Fis family L0P85_07820 PF00158 Sigma-54 interaction domain L0P85_07825 PF00291 Pyridoxal-phosphate dependent enzyme L0P85_07830 PF00132 Bacterial transferase hexapeptide (six repeats) L0P85_07840 PF04205 FMN-binding domain L0P85_07840 PF00890 FAD binding domain L0P85_07850 PF01545 Cation efflux family L0P85_07850 PF16916 Dimerisation domain of Zinc Transporter L0P85_07860 PF00375 Sodium:dicarboxylate symporter family L0P85_07880 PF13443 Cro/C1-type HTH DNA-binding domain L0P85_07890 PF12368 Rhodanase C-terminal L0P85_07890 PF17773 UPF0176 acylphosphatase like domain L0P85_07890 PF00581 Rhodanese-like domain L0P85_07895 PF01381 Helix-turn-helix L0P85_07905 PF01987 Mitochondrial biogenesis AIM24 L0P85_07925 PF00440 Bacterial regulatory proteins, tetR family L0P85_07930 PF00005 ABC transporter L0P85_07940 PF00491 Arginase family L0P85_07960 PF03063 Prismane/CO dehydrogenase family L0P85_07965 PF00689 Cation transporting ATPase, C-terminus L0P85_07965 PF00690 Cation transporter/ATPase, N-terminus L0P85_07970 PF10396 GTP-binding protein TrmE N-terminus L0P85_07970 PF01926 50S ribosome-binding GTPase L0P85_07970 PF12631 MnmE helical domain L0P85_07985 PF03551 Transcriptional regulator PadR-like family L0P85_08000 PF13411 MerR HTH family regulatory protein L0P85_08000 PF06445 GyrI-like small molecule binding domain L0P85_08025 PF17179 4Fe-4S dicluster domain L0P85_08030 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B L0P85_08030 PF00175 Oxidoreductase NAD-binding domain L0P85_08035 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain L0P85_08035 PF13187 4Fe-4S dicluster domain L0P85_08035 PF01077 Nitrite and sulphite reductase 4Fe-4S domain L0P85_08040 PF01226 Formate/nitrite transporter L0P85_08045 PF08668 HDOD domain L0P85_08045 PF00563 EAL domain L0P85_08050 PF13426 PAS domain L0P85_08050 PF00512 His Kinase A (phospho-acceptor) domain L0P85_08050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_08050 PF00672 HAMP domain L0P85_08060 PF04011 LemA family L0P85_08065 PF02915 Rubrerythrin L0P85_08070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_08070 PF00512 His Kinase A (phospho-acceptor) domain L0P85_08070 PF00072 Response regulator receiver domain L0P85_08070 PF09308 LuxQ, periplasmic L0P85_08075 PF00877 NlpC/P60 family L0P85_08090 PF06445 GyrI-like small molecule binding domain L0P85_08090 PF13411 MerR HTH family regulatory protein L0P85_08105 PF02548 Ketopantoate hydroxymethyltransferase L0P85_08125 PF08361 MAATS-type transcriptional repressor, C-terminal region L0P85_08125 PF00440 Bacterial regulatory proteins, tetR family L0P85_08130 PF02492 CobW/HypB/UreG, nucleotide-binding domain L0P85_08135 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region L0P85_08135 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_08135 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster L0P85_08145 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA L0P85_08150 PF04239 Protein of unknown function (DUF421) L0P85_08155 PF02525 Flavodoxin-like fold L0P85_08170 PF14693 Ribosomal protein TL5, C-terminal domain L0P85_08170 PF01386 Ribosomal L25p family L0P85_08185 PF08279 HTH domain L0P85_08185 PF13280 WYL domain L0P85_08190 PF01965 DJ-1/PfpI family L0P85_08200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family L0P85_08200 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_08210 PF13649 Methyltransferase domain L0P85_08220 PF01139 tRNA-splicing ligase RtcB L0P85_08255 PF01381 Helix-turn-helix L0P85_08260 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase L0P85_08285 PF00005 ABC transporter L0P85_08290 PF02653 Branched-chain amino acid transport system / permease component L0P85_08295 PF13407 Periplasmic binding protein domain L0P85_08300 PF04389 Peptidase family M28 L0P85_08300 PF02225 PA domain L0P85_08335 PF01973 Protein of unknown function DUF115 L0P85_08355 PF04055 Radical SAM superfamily L0P85_08360 PF01228 Glycine radical L0P85_08360 PF02901 Pyruvate formate lyase-like L0P85_08385 PF00962 Adenosine/AMP deaminase L0P85_08395 PF03880 DbpA RNA binding domain L0P85_08395 PF00270 DEAD/DEAH box helicase L0P85_08395 PF00271 Helicase conserved C-terminal domain L0P85_08400 PF00768 D-alanyl-D-alanine carboxypeptidase L0P85_08400 PF07943 Penicillin-binding protein 5, C-terminal domain L0P85_08405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_08405 PF00512 His Kinase A (phospho-acceptor) domain L0P85_08410 PF00989 PAS fold L0P85_08410 PF00512 His Kinase A (phospho-acceptor) domain L0P85_08410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_08410 PF00672 HAMP domain L0P85_08425 PF02525 Flavodoxin-like fold L0P85_08430 PF01523 Putative modulator of DNA gyrase L0P85_08435 PF01523 Putative modulator of DNA gyrase L0P85_08440 PF07969 Amidohydrolase family L0P85_08450 PF01638 HxlR-like helix-turn-helix L0P85_08455 PF00724 NADH:flavin oxidoreductase / NADH oxidase family L0P85_08455 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_08465 PF13419 Haloacid dehalogenase-like hydrolase L0P85_08490 PF00230 Major intrinsic protein L0P85_08495 PF09861 Lactate racemase N-terminal domain L0P85_08500 PF13545 Crp-like helix-turn-helix domain L0P85_08505 PF00300 Histidine phosphatase superfamily (branch 1) L0P85_08510 PF01794 Ferric reductase like transmembrane component L0P85_08510 PF04205 FMN-binding domain L0P85_08525 PF03551 Transcriptional regulator PadR-like family L0P85_08535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L0P85_08550 PF01568 Molydopterin dinucleotide binding domain L0P85_08550 PF00384 Molybdopterin oxidoreductase L0P85_08550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain L0P85_08560 PF00005 ABC transporter L0P85_08560 PF00664 ABC transporter transmembrane region L0P85_08565 PF00664 ABC transporter transmembrane region L0P85_08565 PF00005 ABC transporter L0P85_08580 PF02583 Metal-sensitive transcriptional repressor L0P85_08585 PF00403 Heavy-metal-associated domain L0P85_08590 PF02469 Fasciclin domain L0P85_08595 PF04070 Domain of unknown function (DUF378) L0P85_08600 PF02632 BioY family L0P85_08605 PF04055 Radical SAM superfamily L0P85_08605 PF06968 Biotin and Thiamin Synthesis associated domain L0P85_08620 PF01872 RibD C-terminal domain L0P85_08630 PF02492 CobW/HypB/UreG, nucleotide-binding domain L0P85_08630 PF07683 Cobalamin synthesis protein cobW C-terminal domain L0P85_08635 PF04227 Indigoidine synthase A like protein L0P85_08640 PF00294 pfkB family carbohydrate kinase L0P85_08645 PF07503 HypF finger L0P85_08645 PF17788 HypF Kae1-like domain L0P85_08645 PF00708 Acylphosphatase L0P85_08645 PF01300 Telomere recombination L0P85_08690 PF01235 Sodium:alanine symporter family L0P85_08695 PF00665 Integrase core domain L0P85_08695 PF13276 HTH-like domain L0P85_08695 PF13333 Integrase core domain L0P85_08705 PF02127 Aminopeptidase I zinc metalloprotease (M18) L0P85_08710 PF00571 CBS domain L0P85_08710 PF03471 Transporter associated domain L0P85_08710 PF01595 Cyclin M transmembrane N-terminal domain L0P85_08715 PF05737 Collagen binding domain L0P85_08715 PF05738 Cna protein B-type domain L0P85_08715 PF17802 Prealbumin-like fold domain L0P85_08730 PF08241 Methyltransferase domain L0P85_08745 PF00392 Bacterial regulatory proteins, gntR family L0P85_08750 PF00005 ABC transporter L0P85_08765 PF00072 Response regulator receiver domain L0P85_08765 PF00486 Transcriptional regulatory protein, C terminal L0P85_08770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_08775 PF00005 ABC transporter L0P85_08805 PF00561 alpha/beta hydrolase fold L0P85_08810 PF00005 ABC transporter L0P85_08810 PF13732 Domain of unknown function (DUF4162) L0P85_08825 PF02567 Phenazine biosynthesis-like protein L0P85_08830 PF00392 Bacterial regulatory proteins, gntR family L0P85_08830 PF00155 Aminotransferase class I and II L0P85_08835 PF13302 Acetyltransferase (GNAT) domain L0P85_08845 PF01520 N-acetylmuramoyl-L-alanine amidase L0P85_08870 PF00226 DnaJ domain L0P85_08870 PF01556 DnaJ C terminal domain L0P85_08870 PF00684 DnaJ central domain L0P85_08880 PF01025 GrpE L0P85_08885 PF00012 Hsp70 protein L0P85_08890 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain L0P85_08890 PF00753 Metallo-beta-lactamase superfamily L0P85_08890 PF17770 Ribonuclease J C-terminal domain L0P85_08905 PF16916 Dimerisation domain of Zinc Transporter L0P85_08905 PF01545 Cation efflux family L0P85_08910 PF05922 Peptidase inhibitor I9 L0P85_08910 PF00082 Subtilase family L0P85_08910 PF04151 Bacterial pre-peptidase C-terminal domain L0P85_08920 PF00375 Sodium:dicarboxylate symporter family L0P85_08950 PF13520 Amino acid permease L0P85_08960 PF03033 Glycosyltransferase family 28 N-terminal domain L0P85_08960 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase L0P85_08970 PF00440 Bacterial regulatory proteins, tetR family L0P85_08975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L0P85_08980 PF00690 Cation transporter/ATPase, N-terminus L0P85_08980 PF00689 Cation transporting ATPase, C-terminus L0P85_09015 PF04961 Formiminotransferase-cyclodeaminase L0P85_09020 PF02492 CobW/HypB/UreG, nucleotide-binding domain L0P85_09025 PF00708 Acylphosphatase L0P85_09025 PF17788 HypF Kae1-like domain L0P85_09025 PF01300 Telomere recombination L0P85_09025 PF07503 HypF finger L0P85_09030 PF01455 HupF/HypC family L0P85_09035 PF01924 Hydrogenase formation hypA family L0P85_09040 PF00586 AIR synthase related protein, N-terminal domain L0P85_09040 PF02769 AIR synthase related protein, C-terminal domain L0P85_09050 PF05067 Manganese containing catalase L0P85_09055 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit L0P85_09055 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal L0P85_09060 PF00374 Nickel-dependent hydrogenase L0P85_09080 PF03773 Predicted permease L0P85_09085 PF01022 Bacterial regulatory protein, arsR family L0P85_09090 PF01022 Bacterial regulatory protein, arsR family L0P85_09105 PF01758 Sodium Bile acid symporter family L0P85_09120 PF05593 RHS Repeat L0P85_09140 PF05593 RHS Repeat L0P85_09235 PF03965 Penicillinase repressor L0P85_09250 PF00009 Elongation factor Tu GTP binding domain L0P85_09250 PF16658 Class II release factor RF3, C-terminal domain L0P85_09250 PF03144 Elongation factor Tu domain 2 L0P85_09270 PF13426 PAS domain L0P85_09270 PF00072 Response regulator receiver domain L0P85_09270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_09270 PF00512 His Kinase A (phospho-acceptor) domain L0P85_09270 PF08448 PAS fold L0P85_09275 PF00512 His Kinase A (phospho-acceptor) domain L0P85_09275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_09275 PF00672 HAMP domain L0P85_09275 PF13426 PAS domain L0P85_09280 PF09370 Phosphoenolpyruvate hydrolase-like L0P85_09305 PF08459 UvrC Helix-hairpin-helix N-terminal L0P85_09305 PF02151 UvrB/uvrC motif L0P85_09305 PF12826 Helix-hairpin-helix motif L0P85_09305 PF01541 GIY-YIG catalytic domain L0P85_09315 PF08241 Methyltransferase domain L0P85_09320 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_09325 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_09325 PF12911 N-terminal TM domain of oligopeptide transport permease C L0P85_09330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L0P85_09335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L0P85_09335 PF00005 ABC transporter L0P85_09340 PF00005 ABC transporter L0P85_09340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L0P85_09355 PF00501 AMP-binding enzyme L0P85_09355 PF13193 AMP-binding enzyme C-terminal domain L0P85_09360 PF03062 MBOAT, membrane-bound O-acyltransferase family L0P85_09365 PF00550 Phosphopantetheine attachment site L0P85_09370 PF00317 Ribonucleotide reductase, all-alpha domain L0P85_09370 PF02867 Ribonucleotide reductase, barrel domain L0P85_09370 PF08343 Ribonucleotide reductase N-terminal L0P85_09375 PF00268 Ribonucleotide reductase, small chain L0P85_09395 PF13291 ACT domain L0P85_09395 PF00291 Pyridoxal-phosphate dependent enzyme L0P85_09415 PF01734 Patatin-like phospholipase L0P85_09420 PF02481 DNA recombination-mediator protein A L0P85_09420 PF17782 DprA winged helix domain L0P85_09430 PF07875 Coat F domain L0P85_09435 PF01183 Glycosyl hydrolases family 25 L0P85_09440 PF00672 HAMP domain L0P85_09440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_09440 PF18698 Histidine kinase sensor domain L0P85_09440 PF00512 His Kinase A (phospho-acceptor) domain L0P85_09440 PF00989 PAS fold L0P85_09450 PF01554 MatE L0P85_09460 PF00581 Rhodanese-like domain L0P85_09470 PF01593 Flavin containing amine oxidoreductase L0P85_09475 PF01255 Putative undecaprenyl diphosphate synthase L0P85_09485 PF00271 Helicase conserved C-terminal domain L0P85_09485 PF00176 SNF2 family N-terminal domain L0P85_09485 PF04434 SWIM zinc finger L0P85_09490 PF01416 tRNA pseudouridine synthase L0P85_09495 PF00764 Arginosuccinate synthase L0P85_09500 PF00999 Sodium/hydrogen exchanger family L0P85_09505 PF02608 ABC transporter substrate-binding protein PnrA-like L0P85_09510 PF01212 Beta-eliminating lyase L0P85_09515 PF00005 ABC transporter L0P85_09530 PF00004 ATPase family associated with various cellular activities (AAA) L0P85_09530 PF02861 Clp amino terminal domain, pathogenicity island component L0P85_09530 PF17871 AAA lid domain L0P85_09530 PF07724 AAA domain (Cdc48 subfamily) L0P85_09530 PF10431 C-terminal, D2-small domain, of ClpB protein L0P85_09535 PF13538 UvrD-like helicase C-terminal domain L0P85_09540 PF00300 Histidine phosphatase superfamily (branch 1) L0P85_09550 PF02224 Cytidylate kinase L0P85_09555 PF01553 Acyltransferase L0P85_09560 PF02401 LytB protein L0P85_09565 PF03576 Peptidase family S58 L0P85_09590 PF03466 LysR substrate binding domain L0P85_09590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L0P85_09610 PF00854 POT family L0P85_09615 PF01544 CorA-like Mg2+ transporter protein L0P85_09620 PF14659 Phage integrase, N-terminal SAM-like domain L0P85_09620 PF00589 Phage integrase family L0P85_09630 PF02390 Putative methyltransferase L0P85_09655 PF04232 Stage V sporulation protein S (SpoVS) L0P85_09660 PF00589 Phage integrase family L0P85_09660 PF02899 Phage integrase, N-terminal SAM-like domain L0P85_09665 PF00717 Peptidase S24-like L0P85_09665 PF01726 LexA DNA binding domain L0P85_09670 PF01048 Phosphorylase superfamily L0P85_09680 PF00535 Glycosyl transferase family 2 L0P85_09685 PF12146 Serine aminopeptidase, S33 L0P85_09710 PF00005 ABC transporter L0P85_09715 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_09720 PF02653 Branched-chain amino acid transport system / permease component L0P85_09725 PF02653 Branched-chain amino acid transport system / permease component L0P85_09730 PF00005 ABC transporter L0P85_09735 PF02608 ABC transporter substrate-binding protein PnrA-like L0P85_09740 PF03816 Cell envelope-related transcriptional attenuator domain L0P85_09745 PF03816 Cell envelope-related transcriptional attenuator domain L0P85_09755 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster L0P85_09755 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_09755 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region L0P85_09760 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region L0P85_09760 PF00037 4Fe-4S binding domain L0P85_09760 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit L0P85_09785 PF06838 Methionine gamma-lyase L0P85_09790 PF17209 Hfq protein L0P85_09805 PF05192 MutS domain III L0P85_09805 PF01624 MutS domain I L0P85_09805 PF05190 MutS family domain IV L0P85_09805 PF00488 MutS domain V L0P85_09805 PF05188 MutS domain II L0P85_09815 PF00293 NUDIX domain L0P85_09820 PF04055 Radical SAM superfamily L0P85_09820 PF01938 TRAM domain L0P85_09820 PF00919 Uncharacterized protein family UPF0004 L0P85_09830 PF04239 Protein of unknown function (DUF421) L0P85_09840 PF03851 UV-endonuclease UvdE L0P85_09850 PF06965 Na+/H+ antiporter 1 L0P85_09855 PF00578 AhpC/TSA family L0P85_09865 PF10371 Domain of unknown function L0P85_09865 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II L0P85_09865 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase L0P85_09865 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg L0P85_09865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain L0P85_09875 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_09875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L0P85_09885 PF00005 ABC transporter L0P85_09890 PF01032 FecCD transport family L0P85_09920 PF17770 Ribonuclease J C-terminal domain L0P85_09920 PF00753 Metallo-beta-lactamase superfamily L0P85_09920 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain L0P85_09925 PF00180 Isocitrate/isopropylmalate dehydrogenase L0P85_09925 PF18324 Hypothetical protein TT1725 L0P85_09930 PF00330 Aconitase family (aconitate hydratase) L0P85_09935 PF00682 HMGL-like L0P85_09965 PF01380 SIS domain L0P85_09965 PF01418 Helix-turn-helix domain, rpiR family L0P85_09970 PF06962 Putative rRNA methylase L0P85_09975 PF00849 RNA pseudouridylate synthase L0P85_09975 PF01479 S4 domain L0P85_09985 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain L0P85_09985 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain L0P85_09990 PF00696 Amino acid kinase family L0P85_09990 PF01842 ACT domain L0P85_09990 PF13840 ACT domain L0P85_10010 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain L0P85_10010 PF00749 tRNA synthetases class I (E and Q), catalytic domain L0P85_10020 PF00781 Diacylglycerol kinase catalytic domain L0P85_10035 PF01520 N-acetylmuramoyl-L-alanine amidase L0P85_10035 PF05036 Sporulation related domain L0P85_10055 PF07476 Methylaspartate ammonia-lyase C-terminus L0P85_10055 PF05034 Methylaspartate ammonia-lyase N-terminus L0P85_10060 PF06368 Methylaspartate mutase E chain (MutE) L0P85_10065 PF13941 MutL protein L0P85_10070 PF02310 B12 binding domain L0P85_10080 PF13378 Enolase C-terminal domain-like L0P85_10080 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain L0P85_10095 PF00313 'Cold-shock' DNA-binding domain L0P85_10105 PF11495 Archaeal transcriptional regulator TrmB L0P85_10105 PF01978 Sugar-specific transcriptional regulator TrmB L0P85_10120 PF02423 Ornithine cyclodeaminase/mu-crystallin family L0P85_10130 PF12848 ABC transporter L0P85_10130 PF00005 ABC transporter L0P85_10140 PF06177 QueT transporter L0P85_10145 PF06965 Na+/H+ antiporter 1 L0P85_10155 PF00056 lactate/malate dehydrogenase, NAD binding domain L0P85_10155 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain L0P85_10160 PF00557 Metallopeptidase family M24 L0P85_10160 PF02810 SEC-C motif L0P85_10165 PF01136 Peptidase family U32 L0P85_10165 PF16325 Peptidase family U32 C-terminal domain L0P85_10170 PF01554 MatE L0P85_10180 PF00860 Permease family L0P85_10200 PF00512 His Kinase A (phospho-acceptor) domain L0P85_10200 PF13426 PAS domain L0P85_10200 PF00672 HAMP domain L0P85_10200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_10210 PF01546 Peptidase family M20/M25/M40 L0P85_10210 PF07687 Peptidase dimerisation domain L0P85_10220 PF00009 Elongation factor Tu GTP binding domain L0P85_10220 PF14492 Elongation Factor G, domain II L0P85_10220 PF00679 Elongation factor G C-terminus L0P85_10220 PF03144 Elongation factor Tu domain 2 L0P85_10230 PF00291 Pyridoxal-phosphate dependent enzyme L0P85_10230 PF14821 Threonine synthase N terminus L0P85_10235 PF08544 GHMP kinases C terminal L0P85_10235 PF00288 GHMP kinases N terminal domain L0P85_10260 PF03772 Competence protein L0P85_10260 PF13567 Domain of unknown function (DUF4131) L0P85_10260 PF00753 Metallo-beta-lactamase superfamily L0P85_10265 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 L0P85_10265 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) L0P85_10280 PF17922 Tetracyclin repressor-like, C-terminal domain L0P85_10280 PF00440 Bacterial regulatory proteins, tetR family L0P85_10285 PF02581 Thiamine monophosphate synthase L0P85_10295 PF03070 TENA/THI-4/PQQC family L0P85_10300 PF02110 Hydroxyethylthiazole kinase family L0P85_10305 PF08543 Phosphomethylpyrimidine kinase L0P85_10310 PF01541 GIY-YIG catalytic domain L0P85_10325 PF00293 NUDIX domain L0P85_10330 PF00005 ABC transporter L0P85_10345 PF12787 EcsC protein family L0P85_10355 PF00570 HRDC domain L0P85_10355 PF00271 Helicase conserved C-terminal domain L0P85_10355 PF00270 DEAD/DEAH box helicase L0P85_10355 PF16124 RecQ zinc-binding L0P85_10355 PF09382 RQC domain L0P85_10360 PF03600 Citrate transporter L0P85_10380 PF01022 Bacterial regulatory protein, arsR family L0P85_10385 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_10390 PF00085 Thioredoxin L0P85_10395 PF18719 ArlS sensor domain L0P85_10395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_10395 PF00512 His Kinase A (phospho-acceptor) domain L0P85_10415 PF00950 ABC 3 transport family L0P85_10420 PF00005 ABC transporter L0P85_10425 PF01297 Zinc-uptake complex component A periplasmic L0P85_10425 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment L0P85_10435 PF09190 DALR domain L0P85_10435 PF01406 tRNA synthetases class I (C) catalytic domain L0P85_10450 PF00664 ABC transporter transmembrane region L0P85_10450 PF00005 ABC transporter L0P85_10455 PF00664 ABC transporter transmembrane region L0P85_10455 PF00005 ABC transporter L0P85_10460 PF04304 Protein of unknown function (DUF454) L0P85_10465 PF00005 ABC transporter L0P85_10470 PF01032 FecCD transport family L0P85_10475 PF01497 Periplasmic binding protein L0P85_10515 PF12848 ABC transporter L0P85_10515 PF16326 ABC transporter C-terminal domain L0P85_10515 PF00005 ABC transporter L0P85_10550 PF00005 ABC transporter L0P85_10555 PF01925 Sulfite exporter TauE/SafE L0P85_10560 PF02733 Dak1 domain L0P85_10565 PF00465 Iron-containing alcohol dehydrogenase L0P85_10570 PF12833 Helix-turn-helix domain L0P85_10570 PF17853 GGDEF-like domain L0P85_10585 PF14492 Elongation Factor G, domain II L0P85_10585 PF03764 Elongation factor G, domain IV L0P85_10585 PF00009 Elongation factor Tu GTP binding domain L0P85_10585 PF00679 Elongation factor G C-terminus L0P85_10590 PF12833 Helix-turn-helix domain L0P85_10595 PF03616 Sodium/glutamate symporter L0P85_10615 PF02690 Na+/Pi-cotransporter L0P85_10630 PF04055 Radical SAM superfamily L0P85_10630 PF06463 Molybdenum Cofactor Synthesis C L0P85_10640 PF01906 Putative heavy-metal-binding L0P85_10645 PF00209 Sodium:neurotransmitter symporter family L0P85_10650 PF00892 EamA-like transporter family L0P85_10660 PF05698 Bacterial trigger factor protein (TF) C-terminus L0P85_10665 PF01522 Polysaccharide deacetylase L0P85_10675 PF01502 Phosphoribosyl-AMP cyclohydrolase L0P85_10675 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase L0P85_10680 PF00977 Histidine biosynthesis protein L0P85_10685 PF00977 Histidine biosynthesis protein L0P85_10690 PF00117 Glutamine amidotransferase class-I L0P85_10695 PF00475 Imidazoleglycerol-phosphate dehydratase L0P85_10700 PF00155 Aminotransferase class I and II L0P85_10705 PF01634 ATP phosphoribosyltransferase L0P85_10710 PF13393 Histidyl-tRNA synthetase L0P85_10715 PF02525 Flavodoxin-like fold L0P85_10725 PF13932 GidA associated domain L0P85_10725 PF01134 Glucose inhibited division protein A L0P85_10730 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B L0P85_10730 PF00970 Oxidoreductase FAD-binding domain L0P85_10740 PF02915 Rubrerythrin L0P85_10745 PF04294 VanW like protein L0P85_10760 PF03793 PASTA domain L0P85_10760 PF00069 Protein kinase domain L0P85_10770 PF07670 Nucleoside recognition L0P85_10775 PF01168 Alanine racemase, N-terminal domain L0P85_10820 PF03023 Lipid II flippase MurJ L0P85_10870 PF01321 Creatinase/Prolidase N-terminal domain L0P85_10870 PF00557 Metallopeptidase family M24 L0P85_10920 PF01594 AI-2E family transporter L0P85_10935 PF13673 Acetyltransferase (GNAT) domain L0P85_10950 PF10990 Protein of unknown function (DUF2809) L0P85_10980 PF13276 HTH-like domain L0P85_10980 PF00665 Integrase core domain L0P85_10980 PF13333 Integrase core domain L0P85_11000 PF01381 Helix-turn-helix L0P85_11025 PF00171 Aldehyde dehydrogenase family L0P85_11040 PF00271 Helicase conserved C-terminal domain L0P85_11040 PF00270 DEAD/DEAH box helicase L0P85_11045 PF00999 Sodium/hydrogen exchanger family L0P85_11065 PF12801 4Fe-4S binding domain L0P85_11065 PF04205 FMN-binding domain L0P85_11105 PF00266 Aminotransferase class-V L0P85_11135 PF01695 IstB-like ATP binding protein L0P85_11155 PF00581 Rhodanese-like domain L0P85_11170 PF08331 Domain of unknown function (DUF1730) L0P85_11180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold L0P85_11180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain L0P85_11200 PF01546 Peptidase family M20/M25/M40 L0P85_11215 PF01661 Macro domain L0P85_11235 PF00266 Aminotransferase class-V L0P85_11240 PF01520 N-acetylmuramoyl-L-alanine amidase L0P85_11240 PF08239 Bacterial SH3 domain L0P85_11255 PF01476 LysM domain L0P85_11255 PF06725 3D domain L0P85_11260 PF00313 'Cold-shock' DNA-binding domain L0P85_11275 PF00005 ABC transporter L0P85_11285 PF00664 ABC transporter transmembrane region L0P85_11285 PF00005 ABC transporter L0P85_11290 PF00664 ABC transporter transmembrane region L0P85_11290 PF00005 ABC transporter L0P85_11305 PF02777 Iron/manganese superoxide dismutases, C-terminal domain L0P85_11305 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain L0P85_11310 PF00141 Peroxidase L0P85_11320 PF18665 Tetracyclin repressor-like, C-terminal domain L0P85_11320 PF00440 Bacterial regulatory proteins, tetR family L0P85_11325 PF00005 ABC transporter L0P85_11325 PF12848 ABC transporter L0P85_11380 PF02743 Cache domain L0P85_11380 PF00672 HAMP domain L0P85_11380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L0P85_11395 PF00313 'Cold-shock' DNA-binding domain L0P85_11400 PF01817 Chorismate mutase type II L0P85_11400 PF00793 DAHP synthetase I family L0P85_11405 PF01063 Amino-transferase class IV L0P85_11420 PF04715 Anthranilate synthase component I, N terminal region L0P85_11420 PF00425 chorismate binding enzyme L0P85_11425 PF00117 Glutamine amidotransferase class-I L0P85_11440 PF00005 ABC transporter L0P85_11445 PF07730 Histidine kinase L0P85_11445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_11450 PF00196 Bacterial regulatory proteins, luxR family L0P85_11450 PF00072 Response regulator receiver domain L0P85_11455 PF00854 POT family L0P85_11460 PF00005 ABC transporter L0P85_11475 PF00072 Response regulator receiver domain L0P85_11475 PF00486 Transcriptional regulatory protein, C terminal L0P85_11480 PF00512 His Kinase A (phospho-acceptor) domain L0P85_11480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_11480 PF00672 HAMP domain L0P85_11500 PF00690 Cation transporter/ATPase, N-terminus L0P85_11500 PF00689 Cation transporting ATPase, C-terminus L0P85_11520 PF01327 Polypeptide deformylase L0P85_11535 PF13286 Phosphohydrolase-associated domain L0P85_11535 PF01966 HD domain L0P85_11550 PF00005 ABC transporter L0P85_11555 PF00392 Bacterial regulatory proteins, gntR family L0P85_11560 PF07687 Peptidase dimerisation domain L0P85_11560 PF01546 Peptidase family M20/M25/M40 L0P85_11565 PF03606 C4-dicarboxylate anaerobic carrier L0P85_11590 PF05857 TraX protein L0P85_11620 PF01208 Uroporphyrinogen decarboxylase (URO-D) L0P85_11630 PF01208 Uroporphyrinogen decarboxylase (URO-D) L0P85_11635 PF02310 B12 binding domain L0P85_11635 PF02607 B12 binding domain L0P85_11660 PF02687 FtsX-like permease family L0P85_11665 PF00005 ABC transporter L0P85_11675 PF00486 Transcriptional regulatory protein, C terminal L0P85_11675 PF00072 Response regulator receiver domain L0P85_11685 PF00005 ABC transporter L0P85_11695 PF01113 Dihydrodipicolinate reductase, N-terminus L0P85_11695 PF05173 Dihydrodipicolinate reductase, C-terminus L0P85_11710 PF01979 Amidohydrolase family L0P85_11725 PF01817 Chorismate mutase type II L0P85_11725 PF00800 Prephenate dehydratase L0P85_11730 PF01264 Chorismate synthase L0P85_11735 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L0P85_11740 PF18152 DAHP synthase ferredoxin-like domain L0P85_11740 PF00793 DAHP synthetase I family L0P85_11745 PF02915 Rubrerythrin L0P85_11755 PF00266 Aminotransferase class-V L0P85_11765 PF01712 Deoxynucleoside kinase L0P85_11775 PF00990 Diguanylate cyclase, GGDEF domain L0P85_11775 PF08448 PAS fold L0P85_11780 PF01183 Glycosyl hydrolases family 25 L0P85_11785 PF01380 SIS domain L0P85_11785 PF01418 Helix-turn-helix domain, rpiR family L0P85_11790 PF01418 Helix-turn-helix domain, rpiR family L0P85_11790 PF01380 SIS domain L0P85_11795 PF00367 phosphotransferase system, EIIB L0P85_11795 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 L0P85_11795 PF02378 Phosphotransferase system, EIIC L0P85_11810 PF02378 Phosphotransferase system, EIIC L0P85_11810 PF00367 phosphotransferase system, EIIB L0P85_11815 PF02780 Transketolase, C-terminal domain L0P85_11815 PF13292 1-deoxy-D-xylulose-5-phosphate synthase L0P85_11815 PF02779 Transketolase, pyrimidine binding domain L0P85_11820 PF00269 Small, acid-soluble spore proteins, alpha/beta type L0P85_11835 PF12848 ABC transporter L0P85_11835 PF00005 ABC transporter L0P85_11855 PF00583 Acetyltransferase (GNAT) family L0P85_11855 PF00814 Glycoprotease family L0P85_11860 PF10502 Signal peptidase, peptidase S26 L0P85_11870 PF14602 Hexapeptide repeat of succinyl-transferase L0P85_11870 PF12464 Maltose acetyltransferase L0P85_11875 PF13302 Acetyltransferase (GNAT) domain L0P85_11940 PF13349 Putative adhesin L0P85_11975 PF07995 Glucose / Sorbosone dehydrogenase L0P85_11990 PF00069 Protein kinase domain L0P85_12015 PF06445 GyrI-like small molecule binding domain L0P85_12015 PF12833 Helix-turn-helix domain L0P85_12025 PF01208 Uroporphyrinogen decarboxylase (URO-D) L0P85_12030 PF01425 Amidase L0P85_12040 PF01595 Cyclin M transmembrane N-terminal domain L0P85_12040 PF03471 Transporter associated domain L0P85_12040 PF00571 CBS domain L0P85_12045 PF03471 Transporter associated domain L0P85_12045 PF00571 CBS domain L0P85_12045 PF01595 Cyclin M transmembrane N-terminal domain L0P85_12055 PF07883 Cupin domain L0P85_12065 PF03033 Glycosyltransferase family 28 N-terminal domain L0P85_12080 PF00246 Zinc carboxypeptidase L0P85_12080 PF01476 LysM domain L0P85_12105 PF17202 Single cache domain 3 L0P85_12105 PF00672 HAMP domain L0P85_12105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L0P85_12110 PF07478 D-ala D-ala ligase C-terminus L0P85_12110 PF01820 D-ala D-ala ligase N-terminus L0P85_12115 PF00392 Bacterial regulatory proteins, gntR family L0P85_12115 PF00155 Aminotransferase class I and II L0P85_12120 PF00155 Aminotransferase class I and II L0P85_12130 PF16326 ABC transporter C-terminal domain L0P85_12130 PF12848 ABC transporter L0P85_12130 PF00005 ABC transporter L0P85_12135 PF03009 Glycerophosphoryl diester phosphodiesterase family L0P85_12160 PF02016 LD-carboxypeptidase N-terminal domain L0P85_12160 PF17676 LD-carboxypeptidase C-terminal domain L0P85_12180 PF03600 Citrate transporter L0P85_12180 PF02080 TrkA-C domain L0P85_12185 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L0P85_12185 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L0P85_12190 PF00313 'Cold-shock' DNA-binding domain L0P85_12195 PF06961 Protein of unknown function (DUF1294) L0P85_12210 PF13627 Prokaryotic lipoprotein-attachment site L0P85_12210 PF00080 Copper/zinc superoxide dismutase (SODC) L0P85_12220 PF00188 Cysteine-rich secretory protein family L0P85_12255 PF01037 Lrp/AsnC ligand binding domain L0P85_12265 PF00690 Cation transporter/ATPase, N-terminus L0P85_12265 PF00689 Cation transporting ATPase, C-terminus L0P85_12285 PF00313 'Cold-shock' DNA-binding domain L0P85_12295 PF08543 Phosphomethylpyrimidine kinase L0P85_12305 PF00202 Aminotransferase class-III L0P85_12310 PF00689 Cation transporting ATPase, C-terminus L0P85_12310 PF00690 Cation transporter/ATPase, N-terminus L0P85_12330 PF03551 Transcriptional regulator PadR-like family L0P85_12340 PF00534 Glycosyl transferases group 1 L0P85_12340 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase L0P85_12350 PF01551 Peptidase family M23 L0P85_12365 PF03372 Endonuclease/Exonuclease/phosphatase family L0P85_12375 PF00155 Aminotransferase class I and II L0P85_12390 PF02899 Phage integrase, N-terminal SAM-like domain L0P85_12390 PF00589 Phage integrase family L0P85_12400 PF01966 HD domain L0P85_12400 PF00013 KH domain L0P85_12400 PF12072 Domain of unknown function (DUF3552) L0P85_12405 PF00154 recA bacterial DNA recombination protein L0P85_12410 PF01066 CDP-alcohol phosphatidyltransferase L0P85_12415 PF04055 Radical SAM superfamily L0P85_12415 PF18693 TRAM domain L0P85_12415 PF00919 Uncharacterized protein family UPF0004 L0P85_12425 PF17854 FtsK alpha domain L0P85_12425 PF13491 4TM region of DNA translocase FtsK/SpoIIIE L0P85_12425 PF01580 FtsK/SpoIIIE family L0P85_12425 PF09397 Ftsk gamma domain L0P85_12430 PF00574 Clp protease L0P85_12435 PF00696 Amino acid kinase family L0P85_12435 PF13840 ACT domain L0P85_12440 PF05239 PRC-barrel domain L0P85_12445 PF00675 Insulinase (Peptidase family M16) L0P85_12445 PF05193 Peptidase M16 inactive domain L0P85_12450 PF01522 Polysaccharide deacetylase L0P85_12455 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain L0P85_12455 PF00013 KH domain L0P85_12455 PF00575 S1 RNA binding domain L0P85_12455 PF03725 3' exoribonuclease family, domain 2 L0P85_12455 PF01138 3' exoribonuclease family, domain 1 L0P85_12460 PF02645 Uncharacterised protein, DegV family COG1307 L0P85_12465 PF00312 Ribosomal protein S15 L0P85_12470 PF01687 Riboflavin kinase L0P85_12470 PF06574 FAD synthetase L0P85_12475 PF16198 tRNA pseudouridylate synthase B C-terminal domain L0P85_12475 PF01509 TruB family pseudouridylate synthase (N terminal domain) L0P85_12480 PF02272 DHHA1 domain L0P85_12480 PF01368 DHH family L0P85_12485 PF02033 Ribosome-binding factor A L0P85_12490 PF11987 Translation-initiation factor 2 L0P85_12490 PF00009 Elongation factor Tu GTP binding domain L0P85_12490 PF04760 Translation initiation factor IF-2, N-terminal region L0P85_12495 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family L0P85_12500 PF04296 Protein of unknown function (DUF448) L0P85_12505 PF08529 NusA N-terminal domain L0P85_12505 PF00575 S1 RNA binding domain L0P85_12505 PF13184 NusA-like KH domain L0P85_12510 PF02576 RimP N-terminal domain L0P85_12510 PF17384 RimP C-terminal SH3 domain L0P85_12515 PF10688 Bacterial inner membrane protein L0P85_12520 PF11490 DNA polymerase III polC-type N-terminus II L0P85_12520 PF07733 Bacterial DNA polymerase III alpha NTPase domain L0P85_12520 PF17657 Bacterial DNA polymerase III alpha subunit finger domain L0P85_12520 PF14579 Helix-hairpin-helix motif L0P85_12520 PF02811 PHP domain L0P85_12520 PF00929 Exonuclease L0P85_12520 PF01336 OB-fold nucleic acid binding domain L0P85_12530 PF02146 Sir2 family L0P85_12540 PF09579 Sporulation protein YtfJ (Spore_YtfJ) L0P85_12555 PF04079 Segregation and condensation complex subunit ScpB L0P85_12560 PF02616 Segregation and condensation protein ScpA L0P85_12565 PF02163 Peptidase family M50 L0P85_12570 PF00768 D-alanyl-D-alanine carboxypeptidase L0P85_12570 PF07943 Penicillin-binding protein 5, C-terminal domain L0P85_12575 PF04456 Protein of unknown function (DUF503) L0P85_12580 PF06133 Control of competence regulator ComK, YlbF/YmcA L0P85_12585 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain L0P85_12585 PF17770 Ribonuclease J C-terminal domain L0P85_12585 PF00753 Metallo-beta-lactamase superfamily L0P85_12590 PF01475 Ferric uptake regulator family L0P85_12595 PF03816 Cell envelope-related transcriptional attenuator domain L0P85_12600 PF06949 Protein of unknown function (DUF1292) L0P85_12605 PF03652 Holliday junction resolvase L0P85_12620 PF06135 IreB regulatory phosphoprotein L0P85_12625 PF02272 DHHA1 domain L0P85_12625 PF01411 tRNA synthetases class II (A) L0P85_12625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L0P85_12635 PF01592 NifU-like N terminal domain L0P85_12640 PF00266 Aminotransferase class-V L0P85_12645 PF02082 Transcriptional regulator L0P85_12660 PF16193 AAA C-terminal domain L0P85_12660 PF05496 Holliday junction DNA helicase RuvB P-loop domain L0P85_12660 PF12002 MgsA AAA+ ATPase C terminal L0P85_12665 PF06018 CodY GAF-like domain L0P85_12665 PF08222 CodY helix-turn-helix domain L0P85_12670 PF01131 DNA topoisomerase L0P85_12670 PF01751 Toprim domain L0P85_12670 PF01396 Topoisomerase DNA binding C4 zinc finger L0P85_12675 PF17782 DprA winged helix domain L0P85_12675 PF02481 DNA recombination-mediator protein A L0P85_12680 PF01078 Magnesium chelatase, subunit ChlI L0P85_12680 PF13335 Magnesium chelatase, subunit ChlI C-terminal L0P85_12685 PF02021 Uncharacterised protein family UPF0102 L0P85_12690 PF09587 Bacterial capsule synthesis protein PGA_cap L0P85_12700 PF09587 Bacterial capsule synthesis protein PGA_cap L0P85_12705 PF04892 VanZ like family L0P85_12710 PF12704 MacB-like periplasmic core domain L0P85_12710 PF00005 ABC transporter L0P85_12710 PF02687 FtsX-like permease family L0P85_12715 PF02687 FtsX-like permease family L0P85_12715 PF12704 MacB-like periplasmic core domain L0P85_12715 PF00005 ABC transporter L0P85_12720 PF00672 HAMP domain L0P85_12720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_12720 PF00512 His Kinase A (phospho-acceptor) domain L0P85_12730 PF00072 Response regulator receiver domain L0P85_12730 PF00486 Transcriptional regulatory protein, C terminal L0P85_12735 PF01769 Divalent cation transporter L0P85_12735 PF03448 MgtE intracellular N domain L0P85_12735 PF00571 CBS domain L0P85_12745 PF03717 Penicillin-binding Protein dimerisation domain L0P85_12745 PF05223 NTF2-like N-terminal transpeptidase domain L0P85_12745 PF00905 Penicillin binding protein transpeptidase domain L0P85_12750 PF01966 HD domain L0P85_12755 PF13411 MerR HTH family regulatory protein L0P85_12765 PF00005 ABC transporter L0P85_12770 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) L0P85_12780 PF01501 Glycosyl transferase family 8 L0P85_12780 PF00535 Glycosyl transferase family 2 L0P85_12785 PF00005 ABC transporter L0P85_12800 PF00072 Response regulator receiver domain L0P85_12800 PF00486 Transcriptional regulatory protein, C terminal L0P85_12810 PF01554 MatE L0P85_12815 PF04055 Radical SAM superfamily L0P85_12815 PF06969 HemN C-terminal domain L0P85_12830 PF09924 Uncharacterised conserved protein (DUF2156) L0P85_12830 PF03706 Lysylphosphatidylglycerol synthase TM region L0P85_12835 PF00271 Helicase conserved C-terminal domain L0P85_12835 PF00270 DEAD/DEAH box helicase L0P85_12845 PF05525 Branched-chain amino acid transport protein L0P85_12850 PF01965 DJ-1/PfpI family L0P85_12865 PF01070 FMN-dependent dehydrogenase L0P85_12865 PF01070 FMN-dependent dehydrogenase L0P85_12870 PF01351 Ribonuclease HII L0P85_12875 PF03553 Na+/H+ antiporter family L0P85_12885 PF01926 50S ribosome-binding GTPase L0P85_12890 PF01245 Ribosomal protein L19 L0P85_12895 PF01746 tRNA (Guanine-1)-methyltransferase L0P85_12900 PF05239 PRC-barrel domain L0P85_12900 PF01782 RimM N-terminal domain L0P85_12910 PF00886 Ribosomal protein S16 L0P85_12915 PF00448 SRP54-type protein, GTPase domain L0P85_12915 PF02881 SRP54-type protein, helical bundle domain L0P85_12915 PF02978 Signal peptide binding domain L0P85_12920 PF04297 Putative helix-turn-helix protein, YlxM / p13 like L0P85_12925 PF02881 SRP54-type protein, helical bundle domain L0P85_12925 PF00448 SRP54-type protein, GTPase domain L0P85_12930 PF06470 SMC proteins Flexible Hinge Domain L0P85_12930 PF02463 RecF/RecN/SMC N terminal domain L0P85_12935 PF06470 SMC proteins Flexible Hinge Domain L0P85_12935 PF02463 RecF/RecN/SMC N terminal domain L0P85_12940 PF06470 SMC proteins Flexible Hinge Domain L0P85_12940 PF02463 RecF/RecN/SMC N terminal domain L0P85_12945 PF04055 Radical SAM superfamily L0P85_12945 PF16199 Radical_SAM C-terminal domain L0P85_12945 PF00583 Acetyltransferase (GNAT) family L0P85_12950 PF14622 Ribonuclease-III-like L0P85_12950 PF00035 Double-stranded RNA binding motif L0P85_12960 PF08207 Elongation factor P (EF-P) KOW-like domain L0P85_12960 PF01132 Elongation factor P (EF-P) OB domain L0P85_12960 PF09285 Elongation factor P, C-terminal L0P85_12965 PF01487 Type I 3-dehydroquinase L0P85_12990 PF18317 Shikimate 5'-dehydrogenase C-terminal domain L0P85_12990 PF08501 Shikimate dehydrogenase substrate binding domain L0P85_12990 PF01488 Shikimate / quinate 5-dehydrogenase L0P85_12995 PF00512 His Kinase A (phospho-acceptor) domain L0P85_12995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_12995 PF00989 PAS fold L0P85_12995 PF16736 Single Cache-like L0P85_13010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_13010 PF00512 His Kinase A (phospho-acceptor) domain L0P85_13015 PF04545 Sigma-70, region 4 L0P85_13015 PF04542 Sigma-70 region 2 L0P85_13020 PF00905 Penicillin binding protein transpeptidase domain L0P85_13020 PF03717 Penicillin-binding Protein dimerisation domain L0P85_13025 PF01047 MarR family L0P85_13030 PF01136 Peptidase family U32 L0P85_13030 PF16325 Peptidase family U32 C-terminal domain L0P85_13035 PF01596 O-methyltransferase L0P85_13040 PF02618 YceG-like family L0P85_13050 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain L0P85_13050 PF00591 Glycosyl transferase family, a/b domain L0P85_13050 PF02885 Glycosyl transferase family, helical bundle domain L0P85_13055 PF01676 Metalloenzyme superfamily L0P85_13060 PF00589 Phage integrase family L0P85_13060 PF02899 Phage integrase, N-terminal SAM-like domain L0P85_13070 PF00293 NUDIX domain L0P85_13085 PF00535 Glycosyl transferase family 2 L0P85_13105 PF13735 tRNA nucleotidyltransferase domain 2 putative L0P85_13105 PF12627 Probable RNA and SrmB- binding site of polymerase A L0P85_13105 PF01743 Poly A polymerase head domain L0P85_13110 PF08769 Sporulation initiation factor Spo0A C terminal L0P85_13110 PF00072 Response regulator receiver domain L0P85_13125 PF01728 FtsJ-like methyltransferase L0P85_13125 PF01479 S4 domain L0P85_13130 PF13292 1-deoxy-D-xylulose-5-phosphate synthase L0P85_13130 PF02779 Transketolase, pyrimidine binding domain L0P85_13130 PF02780 Transketolase, C-terminal domain L0P85_13135 PF02681 Divergent PAP2 family L0P85_13140 PF00348 Polyprenyl synthetase L0P85_13145 PF02609 Exonuclease VII small subunit L0P85_13150 PF13742 OB-fold nucleic acid binding domain L0P85_13150 PF02601 Exonuclease VII, large subunit L0P85_13155 PF00814 Glycoprotease family L0P85_13160 PF01029 NusB family L0P85_13165 PF03780 Asp23 family, cell envelope-related function L0P85_13220 PF03883 Peroxide stress protein YaaA L0P85_13225 PF02504 Fatty acid synthesis protein L0P85_13230 PF01783 Ribosomal L32p protein family L0P85_13240 PF00871 Acetokinase family L0P85_13245 PF05636 HIGH Nucleotidyl Transferase L0P85_13250 PF07670 Nucleoside recognition L0P85_13260 PF01467 Cytidylyltransferase-like L0P85_13270 PF00270 DEAD/DEAH box helicase L0P85_13270 PF00271 Helicase conserved C-terminal domain L0P85_13270 PF17191 RecG wedge domain L0P85_13275 PF02734 DAK2 domain L0P85_13275 PF13684 Dihydroxyacetone kinase family L0P85_13285 PF00830 Ribosomal L28 family L0P85_13295 PF00834 Ribulose-phosphate 3 epimerase family L0P85_13300 PF16745 RsgA N-terminal domain L0P85_13300 PF03193 RsgA GTPase L0P85_13305 PF00069 Protein kinase domain L0P85_13305 PF03793 PASTA domain L0P85_13320 PF04055 Radical SAM superfamily L0P85_13325 PF01029 NusB family L0P85_13325 PF01189 16S rRNA methyltransferase RsmB/F L0P85_13330 PF04298 Putative neutral zinc metallopeptidase L0P85_13340 PF02911 Formyl transferase, C-terminal domain L0P85_13340 PF00551 Formyl transferase L0P85_13345 PF01327 Polypeptide deformylase L0P85_13355 PF02441 Flavoprotein L0P85_13355 PF04127 DNA / pantothenate metabolism flavoprotein L0P85_13360 PF01192 RNA polymerase Rpb6 L0P85_13365 PF00625 Guanylate kinase L0P85_13370 PF08340 Domain of unknown function (DUF1732) L0P85_13370 PF03755 YicC-like family, N-terminal region L0P85_13375 PF01678 Diaminopimelate epimerase L0P85_13385 PF05670 NFACT protein RNA binding domain L0P85_13395 PF00860 Permease family L0P85_13400 PF00156 Phosphoribosyl transferase domain L0P85_13405 PF01479 S4 domain L0P85_13405 PF00849 RNA pseudouridylate synthase L0P85_13410 PF01252 Signal peptidase (SPase) II L0P85_13415 PF01522 Polysaccharide deacetylase L0P85_13420 PF01258 Prokaryotic dksA/traR C4-type zinc finger L0P85_13430 PF01048 Phosphorylase superfamily L0P85_13435 PF02645 Uncharacterised protein, DegV family COG1307 L0P85_13440 PF00440 Bacterial regulatory proteins, tetR family L0P85_13440 PF08360 QacR-like protein, C-terminal region L0P85_13445 PF00133 tRNA synthetases class I (I, L, M and V) L0P85_13445 PF08264 Anticodon-binding domain of tRNA L0P85_13450 PF05103 DivIVA protein L0P85_13465 PF04472 Cell division protein SepF L0P85_13470 PF01168 Alanine racemase, N-terminal domain L0P85_13485 PF02403 Seryl-tRNA synthetase N-terminal domain L0P85_13485 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L0P85_13490 PF01235 Sodium:alanine symporter family L0P85_13495 PF09547 Stage IV sporulation protein A (spore_IV_A) L0P85_13500 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus L0P85_13500 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus L0P85_13505 PF02660 Glycerol-3-phosphate acyltransferase L0P85_13510 PF01926 50S ribosome-binding GTPase L0P85_13510 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal L0P85_13525 PF14045 YIEGIA protein L0P85_13530 PF14045 YIEGIA protein L0P85_13535 PF00989 PAS fold L0P85_13535 PF16736 Single Cache-like L0P85_13535 PF00512 His Kinase A (phospho-acceptor) domain L0P85_13535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_13540 PF00072 Response regulator receiver domain L0P85_13540 PF00486 Transcriptional regulatory protein, C terminal L0P85_13545 PF02578 Multi-copper polyphenol oxidoreductase laccase L0P85_13550 PF03477 ATP cone domain L0P85_13555 PF05239 PRC-barrel domain L0P85_13560 PF04539 Sigma-70 region 3 L0P85_13560 PF04545 Sigma-70, region 4 L0P85_13560 PF04542 Sigma-70 region 2 L0P85_13565 PF04542 Sigma-70 region 2 L0P85_13565 PF04545 Sigma-70, region 4 L0P85_13570 PF03419 Sporulation factor SpoIIGA L0P85_13575 PF12327 FtsZ family, C-terminal domain L0P85_13575 PF00091 Tubulin/FtsZ family, GTPase domain L0P85_13580 PF08478 POTRA domain, FtsQ-type L0P85_13580 PF03799 Cell division protein FtsQ L0P85_13585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L0P85_13595 PF01098 Cell cycle protein L0P85_13600 PF08245 Mur ligase middle domain L0P85_13600 PF02875 Mur ligase family, glutamate ligase domain L0P85_13605 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 L0P85_13605 PF00953 Glycosyl transferase family 4 L0P85_13610 PF01225 Mur ligase family, catalytic domain L0P85_13610 PF02875 Mur ligase family, glutamate ligase domain L0P85_13610 PF08245 Mur ligase middle domain L0P85_13615 PF03793 PASTA domain L0P85_13615 PF03717 Penicillin-binding Protein dimerisation domain L0P85_13615 PF00905 Penicillin binding protein transpeptidase domain L0P85_13630 PF01554 MatE L0P85_13635 PF01053 Cys/Met metabolism PLP-dependent enzyme L0P85_13640 PF01795 MraW methylase family L0P85_13645 PF01790 Prolipoprotein diacylglyceryl transferase L0P85_13655 PF05193 Peptidase M16 inactive domain L0P85_13655 PF00675 Insulinase (Peptidase family M16) L0P85_13660 PF05193 Peptidase M16 inactive domain L0P85_13665 PF06071 Protein of unknown function (DUF933) L0P85_13665 PF01926 50S ribosome-binding GTPase L0P85_13680 PF00069 Protein kinase domain L0P85_13680 PF03793 PASTA domain L0P85_13690 PF04204 Homoserine O-succinyltransferase L0P85_13695 PF01566 Natural resistance-associated macrophage protein L0P85_13705 PF07286 Protein of unknown function (DUF1445) L0P85_13710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L0P85_13710 PF00289 Biotin carboxylase, N-terminal domain L0P85_13710 PF02785 Biotin carboxylase C-terminal domain L0P85_13715 PF00364 Biotin-requiring enzyme L0P85_13720 PF02626 Carboxyltransferase domain, subdomain A and B L0P85_13725 PF02682 Carboxyltransferase domain, subdomain C and D L0P85_13740 PF01964 Radical SAM ThiC family L0P85_13745 PF00375 Sodium:dicarboxylate symporter family L0P85_13765 PF00929 Exonuclease L0P85_13765 PF13307 Helicase C-terminal domain L0P85_13775 PF00005 ABC transporter L0P85_13775 PF00664 ABC transporter transmembrane region L0P85_13780 PF05230 MASE2 domain L0P85_13780 PF00990 Diguanylate cyclase, GGDEF domain L0P85_13790 PF03590 Aspartate-ammonia ligase L0P85_13795 PF00171 Aldehyde dehydrogenase family L0P85_13795 PF00465 Iron-containing alcohol dehydrogenase L0P85_13810 PF01966 HD domain L0P85_13810 PF01743 Poly A polymerase head domain L0P85_13810 PF12627 Probable RNA and SrmB- binding site of polymerase A L0P85_13815 PF03471 Transporter associated domain L0P85_13815 PF00999 Sodium/hydrogen exchanger family L0P85_13820 PF00171 Aldehyde dehydrogenase family L0P85_13820 PF00465 Iron-containing alcohol dehydrogenase L0P85_13830 PF01966 HD domain L0P85_13830 PF00072 Response regulator receiver domain L0P85_13835 PF08000 Bacterial PH domain L0P85_13835 PF11724 YvbH-like oligomerisation region L0P85_13840 PF03180 NLPA lipoprotein L0P85_13845 PF00005 ABC transporter L0P85_13850 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_13855 PF00497 Bacterial extracellular solute-binding proteins, family 3 L0P85_13860 PF13382 Adenine deaminase C-terminal domain L0P85_13860 PF01979 Amidohydrolase family L0P85_13870 PF01554 MatE L0P85_13880 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD L0P85_13890 PF09335 SNARE associated Golgi protein L0P85_13895 PF11799 impB/mucB/samB family C-terminal domain L0P85_13895 PF00817 impB/mucB/samB family L0P85_13905 PF00375 Sodium:dicarboxylate symporter family L0P85_13925 PF00294 pfkB family carbohydrate kinase L0P85_13930 PF05025 RbsD / FucU transport protein family L0P85_13935 PF00005 ABC transporter L0P85_13940 PF02653 Branched-chain amino acid transport system / permease component L0P85_13945 PF13407 Periplasmic binding protein domain L0P85_13955 PF03471 Transporter associated domain L0P85_13955 PF00999 Sodium/hydrogen exchanger family L0P85_13955 PF02080 TrkA-C domain L0P85_13970 PF01713 Smr domain L0P85_13970 PF00488 MutS domain V L0P85_13975 PF12857 TOBE-like domain L0P85_13975 PF00005 ABC transporter L0P85_13975 PF17850 CysA C-terminal regulatory domain L0P85_13980 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_13990 PF12728 Helix-turn-helix domain L0P85_13990 PF12727 PBP superfamily domain L0P85_14000 PF00005 ABC transporter L0P85_14035 PF00196 Bacterial regulatory proteins, luxR family L0P85_14035 PF00072 Response regulator receiver domain L0P85_14060 PF00210 Ferritin-like domain L0P85_14070 PF03176 MMPL family L0P85_14080 PF01966 HD domain L0P85_14100 PF00665 Integrase core domain L0P85_14100 PF13333 Integrase core domain L0P85_14100 PF13276 HTH-like domain L0P85_14105 PF00294 pfkB family carbohydrate kinase L0P85_14125 PF00005 ABC transporter L0P85_14140 PF05569 BlaR1 peptidase M56 L0P85_14140 PF00905 Penicillin binding protein transpeptidase domain L0P85_14145 PF03965 Penicillinase repressor L0P85_14155 PF02645 Uncharacterised protein, DegV family COG1307 L0P85_14175 PF02645 Uncharacterised protein, DegV family COG1307 L0P85_14185 PF00176 SNF2 family N-terminal domain L0P85_14185 PF04434 SWIM zinc finger L0P85_14185 PF00271 Helicase conserved C-terminal domain L0P85_14190 PF00199 Catalase L0P85_14200 PF01891 Cobalt uptake substrate-specific transmembrane region L0P85_14200 PF13190 PDGLE domain L0P85_14225 PF00005 ABC transporter L0P85_14230 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_14235 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_14240 PF12849 PBP superfamily domain L0P85_14245 PF01381 Helix-turn-helix L0P85_14245 PF07883 Cupin domain L0P85_14250 PF02915 Rubrerythrin L0P85_14280 PF00403 Heavy-metal-associated domain L0P85_14285 PF13426 PAS domain L0P85_14285 PF00512 His Kinase A (phospho-acceptor) domain L0P85_14285 PF14827 Double sensory domain of two-component sensor kinase L0P85_14285 PF00672 HAMP domain L0P85_14285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_14290 PF00072 Response regulator receiver domain L0P85_14290 PF00486 Transcriptional regulatory protein, C terminal L0P85_14295 PF02683 Cytochrome C biogenesis protein transmembrane region L0P85_14305 PF13419 Haloacid dehalogenase-like hydrolase L0P85_14315 PF13419 Haloacid dehalogenase-like hydrolase L0P85_14330 PF04203 Sortase domain L0P85_14345 PF05524 PEP-utilising enzyme, N-terminal L0P85_14345 PF00391 PEP-utilising enzyme, mobile domain L0P85_14345 PF02896 PEP-utilising enzyme, TIM barrel domain L0P85_14350 PF00381 PTS HPr component phosphorylation site L0P85_14365 PF12950 TaqI-like C-terminal specificity domain L0P85_14365 PF07669 Eco57I restriction-modification methylase L0P85_14370 PF00877 NlpC/P60 family L0P85_14375 PF00877 NlpC/P60 family L0P85_14375 PF08239 Bacterial SH3 domain L0P85_14375 PF01476 LysM domain L0P85_14380 PF00692 dUTPase L0P85_14385 PF01131 DNA topoisomerase L0P85_14385 PF01751 Toprim domain L0P85_14390 PF07687 Peptidase dimerisation domain L0P85_14390 PF01546 Peptidase family M20/M25/M40 L0P85_14395 PF00854 POT family L0P85_14400 PF01321 Creatinase/Prolidase N-terminal domain L0P85_14400 PF00557 Metallopeptidase family M24 L0P85_14405 PF01321 Creatinase/Prolidase N-terminal domain L0P85_14405 PF00557 Metallopeptidase family M24 L0P85_14410 PF03814 Potassium-transporting ATPase A subunit L0P85_14420 PF02669 K+-transporting ATPase, c chain L0P85_14425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_14425 PF13493 Domain of unknown function (DUF4118) L0P85_14425 PF00512 His Kinase A (phospho-acceptor) domain L0P85_14425 PF02702 Osmosensitive K+ channel His kinase sensor domain L0P85_14430 PF00072 Response regulator receiver domain L0P85_14430 PF00486 Transcriptional regulatory protein, C terminal L0P85_14435 PF00391 PEP-utilising enzyme, mobile domain L0P85_14435 PF02896 PEP-utilising enzyme, TIM barrel domain L0P85_14435 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain L0P85_14440 PF03618 Kinase/pyrophosphorylase L0P85_14445 PF00571 CBS domain L0P85_14445 PF08279 HTH domain L0P85_14450 PF05746 DALR anticodon binding domain L0P85_14450 PF02092 Glycyl-tRNA synthetase beta subunit L0P85_14455 PF02091 Glycyl-tRNA synthetase alpha subunit L0P85_14465 PF02565 Recombination protein O C terminal L0P85_14465 PF11967 Recombination protein O N terminal L0P85_14470 PF03448 MgtE intracellular N domain L0P85_14470 PF01769 Divalent cation transporter L0P85_14470 PF00571 CBS domain L0P85_14475 PF07650 KH domain L0P85_14475 PF01926 50S ribosome-binding GTPase L0P85_14480 PF01219 Prokaryotic diacylglycerol kinase L0P85_14485 PF02130 Uncharacterized protein family UPF0054 L0P85_14490 PF02562 PhoH-like protein L0P85_14505 PF03073 TspO/MBR family L0P85_14510 PF09424 Yqey-like protein L0P85_14515 PF01165 Ribosomal protein S21 L0P85_14520 PF01230 HIT domain L0P85_14525 PF00919 Uncharacterized protein family UPF0004 L0P85_14525 PF01938 TRAM domain L0P85_14525 PF04055 Radical SAM superfamily L0P85_14530 PF04452 RNA methyltransferase L0P85_14540 PF01556 DnaJ C terminal domain L0P85_14540 PF00226 DnaJ domain L0P85_14540 PF00684 DnaJ central domain L0P85_14545 PF00012 Hsp70 protein L0P85_14550 PF01025 GrpE L0P85_14555 PF01628 HrcA protein C terminal domain L0P85_14560 PF06969 HemN C-terminal domain L0P85_14560 PF04055 Radical SAM superfamily L0P85_14570 PF09587 Bacterial capsule synthesis protein PGA_cap L0P85_14575 PF14102 Capsule biosynthesis CapC L0P85_14580 PF08245 Mur ligase middle domain L0P85_14585 PF00679 Elongation factor G C-terminus L0P85_14585 PF00009 Elongation factor Tu GTP binding domain L0P85_14585 PF03144 Elongation factor Tu domain 2 L0P85_14585 PF06421 GTP-binding protein LepA C-terminus L0P85_14600 PF03418 Germination protease L0P85_14605 PF01649 Ribosomal protein S20 L0P85_14610 PF06144 DNA polymerase III, delta subunit L0P85_14615 PF03772 Competence protein L0P85_14615 PF00753 Metallo-beta-lactamase superfamily L0P85_14615 PF13567 Domain of unknown function (DUF4131) L0P85_14635 PF03772 Competence protein L0P85_14635 PF13567 Domain of unknown function (DUF4131) L0P85_14635 PF00753 Metallo-beta-lactamase superfamily L0P85_14640 PF00899 ThiF family L0P85_14645 PF02773 S-adenosylmethionine synthetase, C-terminal domain L0P85_14645 PF02772 S-adenosylmethionine synthetase, central domain L0P85_14645 PF00438 S-adenosylmethionine synthetase, N-terminal domain L0P85_14650 PF00491 Arginase family L0P85_14655 PF17284 Spermidine synthase tetramerisation domain L0P85_14660 PF02675 S-adenosylmethionine decarboxylase L0P85_14665 PF01276 Orn/Lys/Arg decarboxylase, major domain L0P85_14665 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain L0P85_14680 PF03167 Uracil DNA glycosylase superfamily L0P85_14690 PF02424 ApbE family L0P85_14695 PF10531 SLBB domain L0P85_14700 PF07943 Penicillin-binding protein 5, C-terminal domain L0P85_14700 PF00768 D-alanyl-D-alanine carboxypeptidase L0P85_14705 PF14698 Argininosuccinate lyase C-terminal L0P85_14705 PF00206 Lyase L0P85_14715 PF02080 TrkA-C domain L0P85_14715 PF00999 Sodium/hydrogen exchanger family L0P85_14715 PF03471 Transporter associated domain L0P85_14720 PF01042 Endoribonuclease L-PSP L0P85_14725 PF08264 Anticodon-binding domain of tRNA L0P85_14725 PF00133 tRNA synthetases class I (I, L, M and V) L0P85_14725 PF13603 Leucyl-tRNA synthetase, Domain 2 L0P85_14725 PF09334 tRNA synthetases class I (M) L0P85_14735 PF01966 HD domain L0P85_14740 PF01467 Cytidylyltransferase-like L0P85_14745 PF02631 RecX family L0P85_14750 PF00753 Metallo-beta-lactamase superfamily L0P85_14760 PF13443 Cro/C1-type HTH DNA-binding domain L0P85_14770 PF13416 Bacterial extracellular solute-binding protein L0P85_14780 PF09269 Domain of unknown function (DUF1967) L0P85_14780 PF01018 GTP1/OBG L0P85_14780 PF01926 50S ribosome-binding GTPase L0P85_14785 PF01016 Ribosomal L27 protein L0P85_14795 PF00829 Ribosomal prokaryotic L21 protein L0P85_14800 PF00575 S1 RNA binding domain L0P85_14800 PF10150 Ribonuclease E/G family L0P85_14815 PF00258 Flavodoxin L0P85_14815 PF00753 Metallo-beta-lactamase superfamily L0P85_14820 PF02142 MGS-like domain L0P85_14825 PF01098 Cell cycle protein L0P85_14830 PF03776 Septum formation topological specificity factor MinE L0P85_14835 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain L0P85_14840 PF03775 Septum formation inhibitor MinC, C-terminal domain L0P85_14845 PF00905 Penicillin binding protein transpeptidase domain L0P85_14845 PF03717 Penicillin-binding Protein dimerisation domain L0P85_14865 PF04002 RadC-like JAB domain L0P85_14870 PF02545 Maf-like protein L0P85_14875 PF00037 4Fe-4S binding domain L0P85_14875 PF13187 4Fe-4S dicluster domain L0P85_14875 PF04060 Putative Fe-S cluster L0P85_14880 PF02508 Rnf-Nqr subunit, membrane protein L0P85_14885 PF02508 Rnf-Nqr subunit, membrane protein L0P85_14890 PF04205 FMN-binding domain L0P85_14895 PF03116 NQR2, RnfD, RnfE family L0P85_14900 PF13375 RnfC Barrel sandwich hybrid domain L0P85_14900 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit L0P85_14900 PF13237 4Fe-4S dicluster domain L0P85_14900 PF10531 SLBB domain L0P85_14910 PF01476 LysM domain L0P85_14910 PF00877 NlpC/P60 family L0P85_14910 PF08239 Bacterial SH3 domain L0P85_14915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily L0P85_14935 PF10086 YhfC intramembrane metalloprotease L0P85_14945 PF04397 LytTr DNA-binding domain L0P85_14945 PF00072 Response regulator receiver domain L0P85_14955 PF01063 Amino-transferase class IV L0P85_14970 PF01121 Dephospho-CoA kinase L0P85_14975 PF01367 5'-3' exonuclease, C-terminal SAM fold L0P85_14975 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain L0P85_14975 PF00476 DNA polymerase family A L0P85_14995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain L0P85_14995 PF02743 Cache domain L0P85_14995 PF00672 HAMP domain L0P85_15000 PF01680 SOR/SNZ family L0P85_15005 PF12146 Serine aminopeptidase, S33 L0P85_15020 PF02127 Aminopeptidase I zinc metalloprotease (M18) L0P85_15025 PF05979 Bacterial protein of unknown function (DUF896) L0P85_15030 PF00155 Aminotransferase class I and II L0P85_15030 PF00392 Bacterial regulatory proteins, gntR family L0P85_15035 PF02811 PHP domain L0P85_15040 PF01943 Polysaccharide biosynthesis protein L0P85_15040 PF14667 Polysaccharide biosynthesis C-terminal domain L0P85_15075 PF02632 BioY family L0P85_15090 PF01979 Amidohydrolase family L0P85_15095 PF02971 Formiminotransferase domain L0P85_15095 PF07837 Formiminotransferase domain, N-terminal subdomain L0P85_15100 PF01175 Urocanase Rossmann-like domain L0P85_15100 PF17392 Urocanase C-terminal domain L0P85_15100 PF17391 Urocanase N-terminal domain L0P85_15110 PF13276 HTH-like domain L0P85_15110 PF00665 Integrase core domain L0P85_15110 PF13333 Integrase core domain L0P85_15115 PF00356 Bacterial regulatory proteins, lacI family L0P85_15130 PF03551 Transcriptional regulator PadR-like family L0P85_15140 PF01969 Protein of unknown function DUF111 L0P85_15150 PF13411 MerR HTH family regulatory protein L0P85_15160 PF01077 Nitrite and sulphite reductase 4Fe-4S domain L0P85_15160 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain L0P85_15165 PF02782 FGGY family of carbohydrate kinases, C-terminal domain L0P85_15165 PF00370 FGGY family of carbohydrate kinases, N-terminal domain L0P85_15170 PF01261 Xylose isomerase-like TIM barrel L0P85_15175 PF00480 ROK family L0P85_15180 PF02653 Branched-chain amino acid transport system / permease component L0P85_15185 PF00005 ABC transporter L0P85_15190 PF13407 Periplasmic binding protein domain L0P85_15195 PF01263 Aldose 1-epimerase L0P85_15205 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain L0P85_15205 PF00056 lactate/malate dehydrogenase, NAD binding domain L0P85_15225 PF01522 Polysaccharide deacetylase L0P85_15235 PF08281 Sigma-70, region 4 L0P85_15235 PF04542 Sigma-70 region 2 L0P85_15240 PF01230 HIT domain L0P85_15270 PF00005 ABC transporter L0P85_15270 PF08402 TOBE domain L0P85_15275 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_15285 PF00293 NUDIX domain L0P85_15290 PF04851 Type III restriction enzyme, res subunit L0P85_15290 PF00271 Helicase conserved C-terminal domain L0P85_15290 PF08463 EcoEI R protein C-terminal L0P85_15290 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) L0P85_15295 PF01012 Electron transfer flavoprotein domain L0P85_15300 PF00766 Electron transfer flavoprotein FAD-binding domain L0P85_15300 PF01012 Electron transfer flavoprotein domain L0P85_15310 PF01047 MarR family L0P85_15330 PF04851 Type III restriction enzyme, res subunit L0P85_15330 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) L0P85_15330 PF08463 EcoEI R protein C-terminal L0P85_15330 PF00271 Helicase conserved C-terminal domain L0P85_15355 PF11867 Domain of unknown function (DUF3387) L0P85_15355 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) L0P85_15355 PF18766 SWI2/SNF2 ATPase L0P85_15365 PF02384 N-6 DNA Methylase L0P85_15375 PF03887 YfbU domain L0P85_15405 PF00484 Carbonic anhydrase L0P85_15420 PF00474 Sodium:solute symporter family L0P85_15425 PF07690 Major Facilitator Superfamily L0P85_15430 PF00356 Bacterial regulatory proteins, lacI family L0P85_15450 PF00005 ABC transporter L0P85_15455 PF01032 FecCD transport family L0P85_15460 PF01497 Periplasmic binding protein L0P85_15470 PF07055 Enoyl reductase FAD binding domain L0P85_15470 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase L0P85_15470 PF12241 Trans-2-enoyl-CoA reductase catalytic region L0P85_15475 PF01575 MaoC like domain L0P85_15480 PF07690 Major Facilitator Superfamily L0P85_15485 PF01144 Coenzyme A transferase L0P85_15490 PF02803 Thiolase, C-terminal domain L0P85_15490 PF00108 Thiolase, N-terminal domain L0P85_15500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family L0P85_15500 PF03466 LysR substrate binding domain L0P85_15510 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_15515 PF09084 NMT1/THI5 like L0P85_15520 PF00005 ABC transporter L0P85_15530 PF00005 ABC transporter L0P85_15530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L0P85_15535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region L0P85_15535 PF00005 ABC transporter L0P85_15540 PF12911 N-terminal TM domain of oligopeptide transport permease C L0P85_15540 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_15545 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_15550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle L0P85_15560 PF00005 ABC transporter L0P85_15565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_15570 PF00072 Response regulator receiver domain L0P85_15570 PF00486 Transcriptional regulatory protein, C terminal L0P85_15575 PF02371 Transposase IS116/IS110/IS902 family L0P85_15575 PF01548 Transposase L0P85_15580 PF06725 3D domain L0P85_15580 PF01476 LysM domain L0P85_15590 PF12704 MacB-like periplasmic core domain L0P85_15590 PF02687 FtsX-like permease family L0P85_15595 PF00005 ABC transporter L0P85_15630 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain L0P85_15630 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain L0P85_15630 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain L0P85_15655 PF00535 Glycosyl transferase family 2 L0P85_15665 PF08666 SAF domain L0P85_15665 PF03102 NeuB family L0P85_15680 PF02348 Cytidylyltransferase L0P85_15690 PF00551 Formyl transferase L0P85_15690 PF02911 Formyl transferase, C-terminal domain L0P85_15695 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family L0P85_15700 PF12464 Maltose acetyltransferase L0P85_15700 PF00132 Bacterial transferase hexapeptide (six repeats) L0P85_15705 PF02719 Polysaccharide biosynthesis protein L0P85_15735 PF03062 MBOAT, membrane-bound O-acyltransferase family L0P85_15760 PF00550 Phosphopantetheine attachment site L0P85_15765 PF00005 ABC transporter L0P85_15770 PF01032 FecCD transport family L0P85_15775 PF01497 Periplasmic binding protein L0P85_15780 PF00005 ABC transporter L0P85_15785 PF01032 FecCD transport family L0P85_15790 PF01497 Periplasmic binding protein L0P85_15800 PF00849 RNA pseudouridylate synthase L0P85_15805 PF04073 Aminoacyl-tRNA editing domain L0P85_15810 PF01513 ATP-NAD kinase L0P85_15815 PF12850 Calcineurin-like phosphoesterase superfamily domain L0P85_15820 PF01594 AI-2E family transporter L0P85_15825 PF01595 Cyclin M transmembrane N-terminal domain L0P85_15825 PF03471 Transporter associated domain L0P85_15825 PF00571 CBS domain L0P85_15830 PF13175 AAA ATPase domain L0P85_15840 PF13175 AAA ATPase domain L0P85_15845 PF12320 Type 5 capsule protein repressor C-terminal domain L0P85_15845 PF00149 Calcineurin-like phosphoesterase L0P85_15850 PF00580 UvrD/REP helicase N-terminal domain L0P85_15850 PF12705 PD-(D/E)XK nuclease superfamily L0P85_15850 PF13361 UvrD-like helicase C-terminal domain L0P85_15855 PF12705 PD-(D/E)XK nuclease superfamily L0P85_15865 PF13361 UvrD-like helicase C-terminal domain L0P85_15865 PF00580 UvrD/REP helicase N-terminal domain L0P85_15880 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component L0P85_15895 PF00005 ABC transporter L0P85_15905 PF12683 Protein of unknown function (DUF3798) L0P85_15930 PF01869 BadF/BadG/BcrA/BcrD ATPase family L0P85_15935 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component L0P85_15980 PF01545 Cation efflux family L0P85_15985 PF00817 impB/mucB/samB family L0P85_15985 PF11799 impB/mucB/samB family C-terminal domain L0P85_15985 PF11798 IMS family HHH motif L0P85_15990 PF08903 Domain of unknown function (DUF1846) L0P85_16000 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain L0P85_16000 PF17770 Ribonuclease J C-terminal domain L0P85_16000 PF00753 Metallo-beta-lactamase superfamily L0P85_16010 PF01546 Peptidase family M20/M25/M40 L0P85_16010 PF07687 Peptidase dimerisation domain L0P85_16020 PF01554 MatE L0P85_16040 PF00291 Pyridoxal-phosphate dependent enzyme L0P85_16050 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) L0P85_16050 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 L0P85_16055 PF07687 Peptidase dimerisation domain L0P85_16055 PF01546 Peptidase family M20/M25/M40 L0P85_16075 PF00486 Transcriptional regulatory protein, C terminal L0P85_16075 PF00072 Response regulator receiver domain L0P85_16085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_16085 PF00512 His Kinase A (phospho-acceptor) domain L0P85_16085 PF00672 HAMP domain L0P85_16095 PF00486 Transcriptional regulatory protein, C terminal L0P85_16095 PF00072 Response regulator receiver domain L0P85_16105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_16105 PF00512 His Kinase A (phospho-acceptor) domain L0P85_16105 PF00672 HAMP domain L0P85_16110 PF01177 Asp/Glu/Hydantoin racemase L0P85_16115 PF13520 Amino acid permease L0P85_16125 PF01515 Phosphate acetyl/butaryl transferase L0P85_16130 PF13411 MerR HTH family regulatory protein L0P85_16130 PF06445 GyrI-like small molecule binding domain L0P85_16135 PF00871 Acetokinase family L0P85_16160 PF10609 NUBPL iron-transfer P-loop NTPase L0P85_16170 PF00672 HAMP domain L0P85_16170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_16170 PF18698 Histidine kinase sensor domain L0P85_16170 PF00512 His Kinase A (phospho-acceptor) domain L0P85_16170 PF00989 PAS fold L0P85_16175 PF00436 Single-strand binding protein family L0P85_16180 PF00128 Alpha amylase, catalytic domain L0P85_16180 PF02903 Alpha amylase, N-terminal ig-like domain L0P85_16180 PF00395 S-layer homology domain L0P85_16185 PF00343 Carbohydrate phosphorylase L0P85_16190 PF08323 Starch synthase catalytic domain L0P85_16190 PF00534 Glycosyl transferases group 1 L0P85_16195 PF00483 Nucleotidyl transferase L0P85_16200 PF00483 Nucleotidyl transferase L0P85_16205 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) L0P85_16205 PF00128 Alpha amylase, catalytic domain L0P85_16205 PF02806 Alpha amylase, C-terminal all-beta domain L0P85_16220 PF03853 YjeF-related protein N-terminus L0P85_16220 PF01256 Carbohydrate kinase L0P85_16225 PF01061 ABC-2 type transporter L0P85_16230 PF01106 NifU-like domain L0P85_16235 PF16656 Purple acid Phosphatase, N-terminal domain L0P85_16235 PF00149 Calcineurin-like phosphoesterase L0P85_16240 PF13419 Haloacid dehalogenase-like hydrolase L0P85_16245 PF00793 DAHP synthetase I family L0P85_16245 PF18152 DAHP synthase ferredoxin-like domain L0P85_16265 PF00270 DEAD/DEAH box helicase L0P85_16265 PF00271 Helicase conserved C-terminal domain L0P85_16275 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 L0P85_16280 PF12791 Anti-sigma factor N-terminus L0P85_16280 PF07691 PA14 domain L0P85_16285 PF04542 Sigma-70 region 2 L0P85_16290 PF00248 Aldo/keto reductase family L0P85_16295 PF00664 ABC transporter transmembrane region L0P85_16295 PF00005 ABC transporter L0P85_16300 PF00664 ABC transporter transmembrane region L0P85_16300 PF00005 ABC transporter L0P85_16315 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_16315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L0P85_16325 PF13291 ACT domain L0P85_16325 PF00291 Pyridoxal-phosphate dependent enzyme L0P85_16345 PF13421 SPFH domain-Band 7 family L0P85_16355 PF04012 PspA/IM30 family L0P85_16360 PF01268 Formate--tetrahydrofolate ligase L0P85_16375 PF01966 HD domain L0P85_16400 PF00269 Small, acid-soluble spore proteins, alpha/beta type L0P85_16410 PF13091 PLD-like domain L0P85_16435 PF02511 Thymidylate synthase complementing protein L0P85_16440 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain L0P85_16440 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain L0P85_16445 PF13597 Anaerobic ribonucleoside-triphosphate reductase L0P85_16445 PF03477 ATP cone domain L0P85_16475 PF01261 Xylose isomerase-like TIM barrel L0P85_16480 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain L0P85_16480 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain L0P85_16485 PF02938 GAD domain L0P85_16485 PF01336 OB-fold nucleic acid binding domain L0P85_16485 PF00152 tRNA synthetases class II (D, K and N) L0P85_16490 PF03129 Anticodon binding domain L0P85_16490 PF13393 Histidyl-tRNA synthetase L0P85_16495 PF04055 Radical SAM superfamily L0P85_16500 PF00753 Metallo-beta-lactamase superfamily L0P85_16505 PF02580 D-Tyr-tRNA(Tyr) deacylase L0P85_16510 PF13291 ACT domain L0P85_16510 PF04607 Region found in RelA / SpoT proteins L0P85_16510 PF02824 TGS domain L0P85_16515 PF00156 Phosphoribosyl transferase domain L0P85_16525 PF10141 Single-strand DNA-specific exonuclease, C terminal domain L0P85_16525 PF01368 DHH family L0P85_16525 PF17768 RecJ OB domain L0P85_16525 PF02272 DHHA1 domain L0P85_16530 PF00132 Bacterial transferase hexapeptide (six repeats) L0P85_16550 PF02699 Preprotein translocase subunit L0P85_16555 PF01702 Queuine tRNA-ribosyltransferase L0P85_16565 PF02547 Queuosine biosynthesis protein L0P85_16570 PF17864 RuvB AAA lid domain L0P85_16570 PF05491 RuvB C-terminal winged helix domain L0P85_16570 PF05496 Holliday junction DNA helicase RuvB P-loop domain L0P85_16575 PF01330 RuvA N terminal domain L0P85_16575 PF07499 RuvA, C-terminal domain L0P85_16580 PF02075 Crossover junction endodeoxyribonuclease RuvC L0P85_16620 PF13411 MerR HTH family regulatory protein L0P85_16625 PF01709 Transcriptional regulator L0P85_16630 PF02540 NAD synthase L0P85_16635 PF01925 Sulfite exporter TauE/SafE L0P85_16650 PF09186 Domain of unknown function (DUF1949) L0P85_16650 PF01205 Uncharacterized protein family UPF0029 L0P85_16665 PF01926 50S ribosome-binding GTPase L0P85_16665 PF16360 GTP-binding GTPase Middle Region L0P85_16665 PF13167 GTP-binding GTPase N-terminal L0P85_16680 PF00005 ABC transporter L0P85_16680 PF12848 ABC transporter L0P85_16690 PF08239 Bacterial SH3 domain L0P85_16690 PF01520 N-acetylmuramoyl-L-alanine amidase L0P85_16700 PF17820 PDZ domain L0P85_16700 PF05580 SpoIVB peptidase S55 L0P85_16705 PF00905 Penicillin binding protein transpeptidase domain L0P85_16705 PF00912 Transglycosylase L0P85_16715 PF07451 Stage V sporulation protein AD (SpoVAD) L0P85_16720 PF03862 SpoVAC/SpoVAEB sporulation membrane protein L0P85_16725 PF04542 Sigma-70 region 2 L0P85_16725 PF04539 Sigma-70 region 3 L0P85_16725 PF04545 Sigma-70, region 4 L0P85_16730 PF13581 Histidine kinase-like ATPase domain L0P85_16735 PF01740 STAS domain L0P85_16740 PF12822 ECF transporter, substrate-specific component L0P85_16745 PF00270 DEAD/DEAH box helicase L0P85_16745 PF00271 Helicase conserved C-terminal domain L0P85_16750 PF01699 Sodium/calcium exchanger protein L0P85_16755 PF02901 Pyruvate formate lyase-like L0P85_16755 PF01228 Glycine radical L0P85_16760 PF04055 Radical SAM superfamily L0P85_16765 PF02568 Thiamine biosynthesis protein (ThiI) L0P85_16765 PF02926 THUMP domain L0P85_16770 PF00266 Aminotransferase class-V L0P85_16775 PF00710 Asparaginase, N-terminal L0P85_16775 PF17763 Glutaminase/Asparaginase C-terminal domain L0P85_16780 PF00005 ABC transporter L0P85_16785 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_16790 PF00497 Bacterial extracellular solute-binding proteins, family 3 L0P85_16795 PF00580 UvrD/REP helicase N-terminal domain L0P85_16795 PF13361 UvrD-like helicase C-terminal domain L0P85_16810 PF00654 Voltage gated chloride channel L0P85_16815 PF00999 Sodium/hydrogen exchanger family L0P85_16840 PF00005 ABC transporter L0P85_16845 PF01032 FecCD transport family L0P85_16860 PF01597 Glycine cleavage H-protein L0P85_16865 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit L0P85_16865 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain L0P85_16870 PF02574 Homocysteine S-methyltransferase L0P85_16870 PF00809 Pterin binding enzyme L0P85_16875 PF04060 Putative Fe-S cluster L0P85_16875 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit L0P85_16880 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit L0P85_16890 PF07992 Pyridine nucleotide-disulphide oxidoreductase L0P85_16890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain L0P85_16895 PF02219 Methylenetetrahydrofolate reductase L0P85_16895 PF02574 Homocysteine S-methyltransferase L0P85_16905 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain L0P85_16905 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain L0P85_16910 PF04961 Formiminotransferase-cyclodeaminase L0P85_16915 PF01268 Formate--tetrahydrofolate ligase L0P85_16920 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain L0P85_16925 PF03063 Prismane/CO dehydrogenase family L0P85_16935 PF04055 Radical SAM superfamily L0P85_16935 PF01938 TRAM domain L0P85_16935 PF00919 Uncharacterized protein family UPF0004 L0P85_16950 PF03485 Arginyl tRNA synthetase N terminal domain L0P85_16950 PF05746 DALR anticodon binding domain L0P85_16950 PF00750 tRNA synthetases class I (R) L0P85_16955 PF04463 Protein of unknown function (DUF523) L0P85_16960 PF00488 MutS domain V L0P85_16960 PF01713 Smr domain L0P85_16965 PF07687 Peptidase dimerisation domain L0P85_16965 PF01546 Peptidase family M20/M25/M40 L0P85_16970 PF16325 Peptidase family U32 C-terminal domain L0P85_16970 PF01136 Peptidase family U32 L0P85_16980 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain L0P85_16980 PF01588 Putative tRNA binding domain L0P85_16980 PF03484 tRNA synthetase B5 domain L0P85_16980 PF03483 B3/4 domain L0P85_16980 PF03147 Ferredoxin-fold anticodon binding domain L0P85_16985 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain L0P85_16985 PF01409 tRNA synthetases class II core domain (F) L0P85_16990 PF00588 SpoU rRNA Methylase family L0P85_16990 PF08032 RNA 2'-O ribose methyltransferase substrate binding L0P85_16995 PF02080 TrkA-C domain L0P85_16995 PF02254 TrkA-N domain L0P85_17000 PF02386 Cation transport protein L0P85_17005 PF00453 Ribosomal protein L20 L0P85_17010 PF01632 Ribosomal protein L35 L0P85_17015 PF00707 Translation initiation factor IF-3, C-terminal domain L0P85_17015 PF05198 Translation initiation factor IF-3, N-terminal domain L0P85_17020 PF00004 ATPase family associated with various cellular activities (AAA) L0P85_17020 PF17862 AAA+ lid domain L0P85_17020 PF01434 Peptidase family M41 L0P85_17035 PF02653 Branched-chain amino acid transport system / permease component L0P85_17040 PF02653 Branched-chain amino acid transport system / permease component L0P85_17045 PF00005 ABC transporter L0P85_17050 PF02608 ABC transporter substrate-binding protein PnrA-like L0P85_17055 PF02645 Uncharacterised protein, DegV family COG1307 L0P85_17060 PF00588 SpoU rRNA Methylase family L0P85_17065 PF04294 VanW like protein L0P85_17070 PF10576 Iron-sulfur binding domain of endonuclease III L0P85_17070 PF00730 HhH-GPD superfamily base excision DNA repair protein L0P85_17070 PF00633 Helix-hairpin-helix motif L0P85_17075 PF05362 Lon protease (S16) C-terminal proteolytic domain L0P85_17075 PF13654 AAA domain L0P85_17080 PF08331 Domain of unknown function (DUF1730) L0P85_17090 PF04960 Glutaminase L0P85_17095 PF00248 Aldo/keto reductase family L0P85_17105 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain L0P85_17105 PF02824 TGS domain L0P85_17105 PF03129 Anticodon binding domain L0P85_17105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L0P85_17110 PF10502 Signal peptidase, peptidase S26 L0P85_17115 PF13367 PrsW family intramembrane metalloprotease L0P85_17150 PF01022 Bacterial regulatory protein, arsR family L0P85_17160 PF01661 Macro domain L0P85_17170 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase L0P85_17175 PF01467 Cytidylyltransferase-like L0P85_17180 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase L0P85_17195 PF00561 alpha/beta hydrolase fold L0P85_17200 PF05958 tRNA (Uracil-5-)-methyltransferase L0P85_17205 PF00849 RNA pseudouridylate synthase L0P85_17205 PF01479 S4 domain L0P85_17210 PF01116 Fructose-bisphosphate aldolase class-II L0P85_17220 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit L0P85_17220 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region L0P85_17220 PF00037 4Fe-4S binding domain L0P85_17225 PF02256 Iron hydrogenase small subunit L0P85_17225 PF02906 Iron only hydrogenase large subunit, C-terminal domain L0P85_17225 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region L0P85_17225 PF00037 4Fe-4S binding domain L0P85_17230 PF02603 HPr Serine kinase N terminus L0P85_17230 PF07475 HPr Serine kinase C-terminal domain L0P85_17235 PF08459 UvrC Helix-hairpin-helix N-terminal L0P85_17235 PF02151 UvrB/uvrC motif L0P85_17235 PF12826 Helix-hairpin-helix motif L0P85_17235 PF01541 GIY-YIG catalytic domain L0P85_17240 PF17755 UvrA DNA-binding domain L0P85_17240 PF17760 UvrA interaction domain L0P85_17245 PF12344 Ultra-violet resistance protein B L0P85_17245 PF04851 Type III restriction enzyme, res subunit L0P85_17245 PF00271 Helicase conserved C-terminal domain L0P85_17245 PF02151 UvrB/uvrC motif L0P85_17245 PF17757 UvrB interaction domain L0P85_17305 PF00403 Heavy-metal-associated domain L0P85_17310 PF01022 Bacterial regulatory protein, arsR family L0P85_17360 PF00873 AcrB/AcrD/AcrF family L0P85_17365 PF08359 YsiA-like protein, C-terminal region L0P85_17365 PF00440 Bacterial regulatory proteins, tetR family L0P85_17370 PF00183 Hsp90 protein L0P85_17375 PF00011 Hsp20/alpha crystallin family L0P85_17380 PF09338 Glycine/sarcosine/betaine reductase component B subunits L0P85_17385 PF09338 Glycine/sarcosine/betaine reductase component B subunits L0P85_17390 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) L0P85_17400 PF09338 Glycine/sarcosine/betaine reductase component B subunits L0P85_17405 PF13237 4Fe-4S dicluster domain L0P85_17405 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit L0P85_17405 PF13375 RnfC Barrel sandwich hybrid domain L0P85_17405 PF10531 SLBB domain L0P85_17420 PF00005 ABC transporter L0P85_17420 PF13732 Domain of unknown function (DUF4162) L0P85_17430 PF04542 Sigma-70 region 2 L0P85_17430 PF04545 Sigma-70, region 4 L0P85_17450 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain L0P85_17450 PF02843 Phosphoribosylglycinamide synthetase, C domain L0P85_17450 PF02844 Phosphoribosylglycinamide synthetase, N domain L0P85_17455 PF01808 AICARFT/IMPCHase bienzyme L0P85_17455 PF02142 MGS-like domain L0P85_17460 PF00551 Formyl transferase L0P85_17465 PF00586 AIR synthase related protein, N-terminal domain L0P85_17465 PF02769 AIR synthase related protein, C-terminal domain L0P85_17475 PF01259 SAICAR synthetase L0P85_17480 PF00731 AIR carboxylase L0P85_17495 PF02608 ABC transporter substrate-binding protein PnrA-like L0P85_17500 PF00117 Glutamine amidotransferase class-I L0P85_17500 PF00958 GMP synthase C terminal domain L0P85_17500 PF02540 NAD synthase L0P85_17505 PF00571 CBS domain L0P85_17505 PF00478 IMP dehydrogenase / GMP reductase domain L0P85_17510 PF00731 AIR carboxylase L0P85_17515 PF00118 TCP-1/cpn60 chaperonin family L0P85_17520 PF00166 Chaperonin 10 Kd subunit L0P85_17525 PF14524 Wzt C-terminal domain L0P85_17525 PF00005 ABC transporter L0P85_17535 PF13091 PLD-like domain L0P85_17535 PF13396 Phospholipase_D-nuclease N-terminal L0P85_17545 PF00156 Phosphoribosyl transferase domain L0P85_17550 PF01180 Dihydroorotate dehydrogenase L0P85_17555 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B L0P85_17560 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain L0P85_17560 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain L0P85_17570 PF00037 4Fe-4S binding domain L0P85_17575 PF12838 4Fe-4S dicluster domain L0P85_17580 PF06971 Putative DNA-binding protein N-terminus L0P85_17580 PF02629 CoA binding domain L0P85_17585 PF12848 ABC transporter L0P85_17585 PF16326 ABC transporter C-terminal domain L0P85_17585 PF00005 ABC transporter L0P85_17590 PF01042 Endoribonuclease L-PSP L0P85_17595 PF00814 Glycoprotease family L0P85_17600 PF00583 Acetyltransferase (GNAT) family L0P85_17605 PF00814 Glycoprotease family L0P85_17610 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE L0P85_17615 PF12822 ECF transporter, substrate-specific component L0P85_17620 PF01979 Amidohydrolase family L0P85_17625 PF17674 HHH domain L0P85_17625 PF00575 S1 RNA binding domain L0P85_17625 PF16921 Tex protein YqgF-like domain L0P85_17625 PF09371 Tex-like protein N-terminal domain L0P85_17635 PF01043 SecA preprotein cross-linking domain L0P85_17635 PF07516 SecA Wing and Scaffold domain L0P85_17635 PF07517 SecA DEAD-like domain L0P85_17635 PF02810 SEC-C motif L0P85_17640 PF02646 RmuC family L0P85_17645 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus L0P85_17645 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein L0P85_17650 PF00156 Phosphoribosyl transferase domain L0P85_17655 PF14490 Helix-hairpin-helix containing domain L0P85_17655 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain L0P85_17655 PF13538 UvrD-like helicase C-terminal domain L0P85_17660 PF00438 S-adenosylmethionine synthetase, N-terminal domain L0P85_17660 PF02772 S-adenosylmethionine synthetase, central domain L0P85_17660 PF02773 S-adenosylmethionine synthetase, C-terminal domain L0P85_17665 PF06866 Protein of unknown function (DUF1256) L0P85_17675 PF12116 Stage III sporulation protein D L0P85_17685 PF08486 Stage II sporulation protein L0P85_17690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) L0P85_17700 PF01380 SIS domain L0P85_17705 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain L0P85_17705 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III L0P85_17705 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II L0P85_17705 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I L0P85_17735 PF00871 Acetokinase family L0P85_17740 PF01515 Phosphate acetyl/butaryl transferase L0P85_17750 PF02457 DisA bacterial checkpoint controller nucleotide-binding L0P85_17925 PF03477 ATP cone domain L0P85_17925 PF13597 Anaerobic ribonucleoside-triphosphate reductase L0P85_17930 PF00155 Aminotransferase class I and II L0P85_17955 PF00152 tRNA synthetases class II (D, K and N) L0P85_17955 PF01336 OB-fold nucleic acid binding domain L0P85_17960 PF01272 Transcription elongation factor, GreA/GreB, C-term L0P85_17960 PF03449 Transcription elongation factor, N-terminal L0P85_17965 PF01207 Dihydrouridine synthase (Dus) L0P85_17970 PF03309 Type III pantothenate kinase L0P85_17985 PF03576 Peptidase family S58 L0P85_17990 PF02237 Biotin protein ligase C terminal domain L0P85_17990 PF03099 Biotin/lipoate A/B protein ligase family L0P85_17990 PF08279 HTH domain L0P85_17995 PF01434 Peptidase family M41 L0P85_17995 PF00004 ATPase family associated with various cellular activities (AAA) L0P85_17995 PF17862 AAA+ lid domain L0P85_18000 PF01171 PP-loop family L0P85_18000 PF11734 TilS substrate C-terminal domain L0P85_18010 PF07486 Cell Wall Hydrolase L0P85_18010 PF01471 Putative peptidoglycan binding domain L0P85_18015 PF09551 Stage II sporulation protein R (spore_II_R) L0P85_18020 PF00392 Bacterial regulatory proteins, gntR family L0P85_18020 PF07729 FCD domain L0P85_18025 PF00288 GHMP kinases N terminal domain L0P85_18025 PF08544 GHMP kinases C terminal L0P85_18035 PF06257 Biofilm formation stimulator VEG L0P85_18040 PF05582 YabG peptidase U57 L0P85_18055 PF07516 SecA Wing and Scaffold domain L0P85_18055 PF01043 SecA preprotein cross-linking domain L0P85_18055 PF07517 SecA DEAD-like domain L0P85_18055 PF02810 SEC-C motif L0P85_18065 PF01479 S4 domain L0P85_18065 PF00849 RNA pseudouridylate synthase L0P85_18090 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family L0P85_18105 PF02574 Homocysteine S-methyltransferase L0P85_18105 PF00809 Pterin binding enzyme L0P85_18105 PF02965 Vitamin B12 dependent methionine synthase, activation domain L0P85_18105 PF02607 B12 binding domain L0P85_18105 PF02310 B12 binding domain L0P85_18115 PF02664 S-Ribosylhomocysteinase (LuxS) L0P85_18130 PF01266 FAD dependent oxidoreductase L0P85_18140 PF08274 PhnA Zinc-Ribbon L0P85_18140 PF03831 PhnA domain L0P85_18145 PF00923 Transaldolase/Fructose-6-phosphate aldolase L0P85_18150 PF02779 Transketolase, pyrimidine binding domain L0P85_18150 PF02780 Transketolase, C-terminal domain L0P85_18155 PF00456 Transketolase, thiamine diphosphate binding domain L0P85_18160 PF03611 PTS system sugar-specific permease component L0P85_18170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L0P85_18175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 L0P85_18175 PF00874 PRD domain L0P85_18175 PF05043 Mga helix-turn-helix domain L0P85_18175 PF08279 HTH domain L0P85_18200 PF03649 Uncharacterised protein family (UPF0014) L0P85_18205 PF00005 ABC transporter L0P85_18210 PF01171 PP-loop family L0P85_18230 PF02590 Predicted SPOUT methyltransferase L0P85_18235 PF00753 Metallo-beta-lactamase superfamily L0P85_18255 PF00709 Adenylosuccinate synthetase L0P85_18265 PF00772 DnaB-like helicase N terminal domain L0P85_18265 PF03796 DnaB-like helicase C terminal domain L0P85_18270 PF03948 Ribosomal protein L9, C-terminal domain L0P85_18270 PF01281 Ribosomal protein L9, N-terminal domain L0P85_18275 PF01368 DHH family L0P85_18275 PF02272 DHHA1 domain L0P85_18290 PF01084 Ribosomal protein S18 L0P85_18295 PF00436 Single-strand binding protein family L0P85_18300 PF01250 Ribosomal protein S6 L0P85_18305 PF00155 Aminotransferase class I and II L0P85_18310 PF06107 Bacterial protein of unknown function (DUF951) L0P85_18320 PF17762 HTH domain found in ParB protein L0P85_18320 PF02195 ParB-like nuclease domain L0P85_18330 PF02195 ParB-like nuclease domain L0P85_18330 PF17762 HTH domain found in ParB protein L0P85_18335 PF02527 rRNA small subunit methyltransferase G L0P85_18340 PF13932 GidA associated domain L0P85_18340 PF01134 Glucose inhibited division protein A L0P85_18345 PF10396 GTP-binding protein TrmE N-terminus L0P85_18345 PF12631 MnmE helical domain L0P85_18345 PF01926 50S ribosome-binding GTPase L0P85_18350 PF14804 Jag N-terminus L0P85_18350 PF01424 R3H domain L0P85_18355 PF02096 60Kd inner membrane protein L0P85_18360 PF01809 Putative membrane protein insertion efficiency factor L0P85_18365 PF00825 Ribonuclease P L0P85_18370 PF00468 Ribosomal protein L34 L0P85_18375 PF11638 DnaA N-terminal domain L0P85_18375 PF08299 Bacterial dnaA protein helix-turn-helix L0P85_18375 PF00308 Bacterial dnaA protein L0P85_18380 PF00712 DNA polymerase III beta subunit, N-terminal domain L0P85_18380 PF02767 DNA polymerase III beta subunit, central domain L0P85_18380 PF02768 DNA polymerase III beta subunit, C-terminal domain L0P85_18390 PF02463 RecF/RecN/SMC N terminal domain L0P85_18395 PF01751 Toprim domain L0P85_18395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_18395 PF00986 DNA gyrase B subunit, carboxyl terminus L0P85_18395 PF00204 DNA gyrase B L0P85_18400 PF03989 DNA gyrase C-terminal domain, beta-propeller L0P85_18400 PF00521 DNA gyrase/topoisomerase IV, subunit A L0P85_18415 PF01740 STAS domain L0P85_18420 PF13581 Histidine kinase-like ATPase domain L0P85_18475 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_18480 PF00528 Binding-protein-dependent transport system inner membrane component L0P85_18485 PF02446 4-alpha-glucanotransferase L0P85_18490 PF00356 Bacterial regulatory proteins, lacI family L0P85_18495 PF17912 MalK OB fold domain L0P85_18495 PF03459 TOBE domain L0P85_18495 PF00005 ABC transporter L0P85_18520 PF14437 MafB19-like deaminase L0P85_18535 PF12169 DNA polymerase III subunits gamma and tau domain III L0P85_18545 PF02132 RecR protein L0P85_18545 PF13662 Toprim domain L0P85_18555 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase L0P85_18555 PF04101 Glycosyltransferase family 28 C-terminal domain L0P85_18560 PF03960 ArsC family L0P85_18800 PF02436 Conserved carboxylase domain L0P85_18800 PF00682 HMGL-like L0P85_18800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain L0P85_18800 PF00364 Biotin-requiring enzyme L0P85_18800 PF02785 Biotin carboxylase C-terminal domain L0P85_18800 PF00289 Biotin carboxylase, N-terminal domain L0P85_18805 PF03764 Elongation factor G, domain IV L0P85_18805 PF14492 Elongation Factor G, domain II L0P85_18805 PF00679 Elongation factor G C-terminus L0P85_18805 PF03144 Elongation factor Tu domain 2 L0P85_18805 PF00009 Elongation factor Tu GTP binding domain L0P85_18810 PF17727 CtsR C-terminal dimerization domain L0P85_18810 PF05848 CtsR N-terminal HTH domain L0P85_18820 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain L0P85_18825 PF00004 ATPase family associated with various cellular activities (AAA) L0P85_18825 PF07724 AAA domain (Cdc48 subfamily) L0P85_18825 PF02861 Clp amino terminal domain, pathogenicity island component L0P85_18825 PF10431 C-terminal, D2-small domain, of ClpB protein L0P85_18825 PF17871 AAA lid domain L0P85_18830 PF18073 Rubredoxin metal binding domain L0P85_18835 PF02457 DisA bacterial checkpoint controller nucleotide-binding L0P85_18835 PF10635 DisA bacterial checkpoint controller linker region L0P85_18845 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase L0P85_18850 PF02542 YgbB family L0P85_18855 PF03129 Anticodon binding domain L0P85_18855 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) L0P85_18855 PF04073 Aminoacyl-tRNA editing domain L0P85_18860 PF00749 tRNA synthetases class I (E and Q), catalytic domain L0P85_18865 PF01406 tRNA synthetases class I (C) catalytic domain L0P85_18865 PF09190 DALR domain L0P85_18870 PF00636 Ribonuclease III domain L0P85_18875 PF02511 Thymidylate synthase complementing protein L0P85_18880 PF08032 RNA 2'-O ribose methyltransferase substrate binding L0P85_18880 PF00588 SpoU rRNA Methylase family L0P85_18885 PF05991 YacP-like NYN domain L0P85_18890 PF08281 Sigma-70, region 4 L0P85_18890 PF04542 Sigma-70 region 2 L0P85_18895 PF00009 Elongation factor Tu GTP binding domain L0P85_18895 PF03143 Elongation factor Tu C-terminal domain L0P85_18895 PF03144 Elongation factor Tu domain 2 L0P85_18900 PF00471 Ribosomal protein L33 L0P85_18910 PF02357 Transcription termination factor nusG L0P85_18910 PF00467 KOW motif L0P85_18915 PF03946 Ribosomal protein L11, N-terminal domain L0P85_18915 PF00298 Ribosomal protein L11, RNA binding domain L0P85_18920 PF00687 Ribosomal protein L1p/L10e family L0P85_18925 PF00466 Ribosomal protein L10 L0P85_18930 PF16320 Ribosomal protein L7/L12 dimerisation domain L0P85_18930 PF00542 Ribosomal protein L7/L12 C-terminal domain L0P85_18935 PF04561 RNA polymerase Rpb2, domain 2 L0P85_18935 PF04565 RNA polymerase Rpb2, domain 3 L0P85_18935 PF10385 RNA polymerase beta subunit external 1 domain L0P85_18935 PF00562 RNA polymerase Rpb2, domain 6 L0P85_18935 PF04560 RNA polymerase Rpb2, domain 7 L0P85_18935 PF04563 RNA polymerase beta subunit L0P85_18940 PF05000 RNA polymerase Rpb1, domain 4 L0P85_18940 PF04998 RNA polymerase Rpb1, domain 5 L0P85_18940 PF04983 RNA polymerase Rpb1, domain 3 L0P85_18940 PF00623 RNA polymerase Rpb1, domain 2 L0P85_18940 PF04997 RNA polymerase Rpb1, domain 1 L0P85_18945 PF00164 Ribosomal protein S12/S23 L0P85_18950 PF00177 Ribosomal protein S7p/S5e L0P85_18960 PF03143 Elongation factor Tu C-terminal domain L0P85_18960 PF00009 Elongation factor Tu GTP binding domain L0P85_18960 PF03144 Elongation factor Tu domain 2 L0P85_18965 PF00338 Ribosomal protein S10p/S20e L0P85_18970 PF00297 Ribosomal protein L3 L0P85_18975 PF00573 Ribosomal protein L4/L1 family L0P85_18980 PF00276 Ribosomal protein L23 L0P85_18985 PF03947 Ribosomal Proteins L2, C-terminal domain L0P85_18985 PF00181 Ribosomal Proteins L2, RNA binding domain L0P85_18990 PF00203 Ribosomal protein S19 L0P85_18995 PF00237 Ribosomal protein L22p/L17e L0P85_19000 PF00189 Ribosomal protein S3, C-terminal domain L0P85_19000 PF07650 KH domain L0P85_19005 PF00252 Ribosomal protein L16p/L10e L0P85_19010 PF00831 Ribosomal L29 protein L0P85_19015 PF00366 Ribosomal protein S17 L0P85_19020 PF00238 Ribosomal protein L14p/L23e L0P85_19025 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 L0P85_19025 PF00467 KOW motif L0P85_19030 PF00281 Ribosomal protein L5 L0P85_19030 PF00673 ribosomal L5P family C-terminus L0P85_19035 PF00253 Ribosomal protein S14p/S29e L0P85_19040 PF00410 Ribosomal protein S8 L0P85_19045 PF00347 Ribosomal protein L6 L0P85_19050 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast L0P85_19055 PF03719 Ribosomal protein S5, C-terminal domain L0P85_19055 PF00333 Ribosomal protein S5, N-terminal domain L0P85_19060 PF00327 Ribosomal protein L30p/L7e L0P85_19065 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A L0P85_19070 PF00344 SecY translocase L0P85_19075 PF05191 Adenylate kinase, active site lid L0P85_19085 PF01176 Translation initiation factor 1A / IF-1 L0P85_19090 PF00444 Ribosomal protein L36 L0P85_19095 PF00416 Ribosomal protein S13/S18 L0P85_19100 PF00411 Ribosomal protein S11 L0P85_19105 PF00163 Ribosomal protein S4/S9 N-terminal domain L0P85_19105 PF01479 S4 domain L0P85_19110 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain L0P85_19110 PF01000 RNA polymerase Rpb3/RpoA insert domain L0P85_19110 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain L0P85_19115 PF01196 Ribosomal protein L17 L0P85_19120 PF00005 ABC transporter L0P85_19125 PF00005 ABC transporter L0P85_19130 PF02361 Cobalt transport protein L0P85_19135 PF01416 tRNA pseudouridine synthase L0P85_19140 PF00572 Ribosomal protein L13 L0P85_19145 PF00380 Ribosomal protein S9/S16 L0P85_19150 PF02915 Rubrerythrin L0P85_19155 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region L0P85_19155 PF01872 RibD C-terminal domain L0P85_19160 PF00677 Lumazine binding domain L0P85_19165 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase L0P85_19165 PF00925 GTP cyclohydrolase II L0P85_19170 PF00885 6,7-dimethyl-8-ribityllumazine synthase L0P85_19180 PF00072 Response regulator receiver domain L0P85_19180 PF00486 Transcriptional regulatory protein, C terminal L0P85_19190 PF16736 Single Cache-like L0P85_19190 PF00989 PAS fold L0P85_19190 PF00512 His Kinase A (phospho-acceptor) domain L0P85_19190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase L0P85_19195 PF01520 N-acetylmuramoyl-L-alanine amidase L0P85_19195 PF00395 S-layer homology domain