locus-tag class description JW646_00010 PF04055 Radical SAM superfamily JW646_00030 PF01973 Protein of unknown function DUF115 JW646_00065 PF02225 PA domain JW646_00065 PF04389 Peptidase family M28 JW646_00070 PF13407 Periplasmic binding protein domain JW646_00075 PF02653 Branched-chain amino acid transport system / permease component JW646_00080 PF00005 ABC transporter JW646_00100 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JW646_00105 PF01381 Helix-turn-helix JW646_00115 PF12327 FtsZ family, C-terminal domain JW646_00115 PF00091 Tubulin/FtsZ family, GTPase domain JW646_00135 PF01139 tRNA-splicing ligase RtcB JW646_00145 PF13649 Methyltransferase domain JW646_00155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JW646_00155 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_00165 PF01965 DJ-1/PfpI family JW646_00190 PF01386 Ribosomal L25p family JW646_00190 PF14693 Ribosomal protein TL5, C-terminal domain JW646_00200 PF02525 Flavodoxin-like fold JW646_00205 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA JW646_00215 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JW646_00215 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JW646_00215 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_00220 PF02492 CobW/HypB/UreG, nucleotide-binding domain JW646_00225 PF00440 Bacterial regulatory proteins, tetR family JW646_00225 PF08361 MAATS-type transcriptional repressor, C-terminal region JW646_00240 PF02569 Pantoate-beta-alanine ligase JW646_00245 PF02548 Ketopantoate hydroxymethyltransferase JW646_00260 PF06445 GyrI-like small molecule binding domain JW646_00260 PF13411 MerR HTH family regulatory protein JW646_00275 PF00877 NlpC/P60 family JW646_00280 PF00512 His Kinase A (phospho-acceptor) domain JW646_00280 PF09308 LuxQ, periplasmic JW646_00280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_00280 PF00072 Response regulator receiver domain JW646_00285 PF02915 Rubrerythrin JW646_00290 PF04011 LemA family JW646_00300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_00300 PF00672 HAMP domain JW646_00300 PF13426 PAS domain JW646_00300 PF00512 His Kinase A (phospho-acceptor) domain JW646_00305 PF00563 EAL domain JW646_00305 PF08668 HDOD domain JW646_00310 PF01226 Formate/nitrite transporter JW646_00315 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JW646_00315 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JW646_00315 PF13187 4Fe-4S dicluster domain JW646_00320 PF00175 Oxidoreductase NAD-binding domain JW646_00320 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JW646_00325 PF17179 4Fe-4S dicluster domain JW646_00355 PF06445 GyrI-like small molecule binding domain JW646_00355 PF13411 MerR HTH family regulatory protein JW646_00370 PF03551 Transcriptional regulator PadR-like family JW646_00385 PF01926 50S ribosome-binding GTPase JW646_00385 PF10396 GTP-binding protein TrmE N-terminus JW646_00385 PF12631 MnmE helical domain JW646_00390 PF00690 Cation transporter/ATPase, N-terminus JW646_00390 PF00689 Cation transporting ATPase, C-terminus JW646_00395 PF03063 Prismane/CO dehydrogenase family JW646_00415 PF00491 Arginase family JW646_00425 PF00005 ABC transporter JW646_00430 PF00440 Bacterial regulatory proteins, tetR family JW646_00450 PF01987 Mitochondrial biogenesis AIM24 JW646_00460 PF01381 Helix-turn-helix JW646_00465 PF12368 Rhodanase C-terminal JW646_00465 PF17773 UPF0176 acylphosphatase like domain JW646_00465 PF00581 Rhodanese-like domain JW646_00475 PF13443 Cro/C1-type HTH DNA-binding domain JW646_00495 PF00375 Sodium:dicarboxylate symporter family JW646_00505 PF01545 Cation efflux family JW646_00505 PF16916 Dimerisation domain of Zinc Transporter JW646_00515 PF00890 FAD binding domain JW646_00515 PF04205 FMN-binding domain JW646_00525 PF00132 Bacterial transferase hexapeptide (six repeats) JW646_00530 PF00291 Pyridoxal-phosphate dependent enzyme JW646_00535 PF02954 Bacterial regulatory protein, Fis family JW646_00535 PF13188 PAS domain JW646_00535 PF00158 Sigma-54 interaction domain JW646_00575 PF06445 GyrI-like small molecule binding domain JW646_00575 PF12833 Helix-turn-helix domain JW646_00585 PF06865 Pyrimidine/purine nucleoside phosphorylase JW646_00590 PF14748 Pyrroline-5-carboxylate reductase dimerisation JW646_00590 PF03807 NADP oxidoreductase coenzyme F420-dependent JW646_00595 PF01228 Glycine radical JW646_00595 PF02901 Pyruvate formate lyase-like JW646_00600 PF04055 Radical SAM superfamily JW646_00605 PF01381 Helix-turn-helix JW646_00610 PF05192 MutS domain III JW646_00610 PF05188 MutS domain II JW646_00610 PF01624 MutS domain I JW646_00610 PF05190 MutS family domain IV JW646_00610 PF00488 MutS domain V JW646_00615 PF01546 Peptidase family M20/M25/M40 JW646_00615 PF07687 Peptidase dimerisation domain JW646_00620 PF03806 AbgT putative transporter family JW646_00625 PF07687 Peptidase dimerisation domain JW646_00625 PF01546 Peptidase family M20/M25/M40 JW646_00635 PF02913 FAD linked oxidases, C-terminal domain JW646_00635 PF01565 FAD binding domain JW646_00640 PF01012 Electron transfer flavoprotein domain JW646_00640 PF00766 Electron transfer flavoprotein FAD-binding domain JW646_00645 PF01012 Electron transfer flavoprotein domain JW646_00650 PF09861 Lactate racemase N-terminal domain JW646_00655 PF02652 L-lactate permease JW646_00660 PF07729 FCD domain JW646_00660 PF00392 Bacterial regulatory proteins, gntR family JW646_00665 PF00301 Rubredoxin JW646_00670 PF02645 Uncharacterised protein, DegV family COG1307 JW646_00685 PF01156 Inosine-uridine preferring nucleoside hydrolase JW646_00690 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JW646_00695 PF00534 Glycosyl transferases group 1 JW646_00695 PF13439 Glycosyltransferase Family 4 JW646_00705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_00705 PF00989 PAS fold JW646_00705 PF16736 Single Cache-like JW646_00705 PF00512 His Kinase A (phospho-acceptor) domain JW646_00710 PF00486 Transcriptional regulatory protein, C terminal JW646_00710 PF00072 Response regulator receiver domain JW646_00730 PF01170 Putative RNA methylase family UPF0020 JW646_00730 PF02926 THUMP domain JW646_00735 PF02540 NAD synthase JW646_00740 PF01168 Alanine racemase, N-terminal domain JW646_00740 PF00842 Alanine racemase, C-terminal domain JW646_00745 PF13520 Amino acid permease JW646_00750 PF13520 Amino acid permease JW646_00760 PF13732 Domain of unknown function (DUF4162) JW646_00760 PF00005 ABC transporter JW646_00765 PF00392 Bacterial regulatory proteins, gntR family JW646_00770 PF03960 ArsC family JW646_00780 PF01869 BadF/BadG/BcrA/BcrD ATPase family JW646_00785 PF01554 MatE JW646_00805 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JW646_00805 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JW646_00820 PF00815 Histidinol dehydrogenase JW646_00835 PF00742 Homoserine dehydrogenase JW646_00835 PF01842 ACT domain JW646_00835 PF03447 Homoserine dehydrogenase, NAD binding domain JW646_00840 PF03631 Virulence factor BrkB JW646_00845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JW646_00845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JW646_00845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JW646_00845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JW646_00850 PF01476 LysM domain JW646_00850 PF06725 3D domain JW646_00875 PF00583 Acetyltransferase (GNAT) family JW646_00875 PF14268 YoaP-like JW646_00885 PF13280 WYL domain JW646_00885 PF08279 HTH domain JW646_00890 PF00465 Iron-containing alcohol dehydrogenase JW646_00895 PF01965 DJ-1/PfpI family JW646_00895 PF12833 Helix-turn-helix domain JW646_00910 PF03553 Na+/H+ antiporter family JW646_00915 PF03553 Na+/H+ antiporter family JW646_00920 PF00899 ThiF family JW646_00925 PF03553 Na+/H+ antiporter family JW646_00935 PF10437 Bacterial lipoate protein ligase C-terminus JW646_00935 PF03099 Biotin/lipoate A/B protein ligase family JW646_00940 PF09335 SNARE associated Golgi protein JW646_00945 PF05552 Conserved TM helix JW646_00945 PF00924 Mechanosensitive ion channel JW646_00950 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JW646_00950 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JW646_00955 PF13091 PLD-like domain JW646_00960 PF02637 GatB domain JW646_00960 PF02934 GatB/GatE catalytic domain JW646_00965 PF01425 Amidase JW646_00970 PF02686 Glu-tRNAGln amidotransferase C subunit JW646_00975 PF00152 tRNA synthetases class II (D, K and N) JW646_00975 PF01336 OB-fold nucleic acid binding domain JW646_00980 PF02915 Rubrerythrin JW646_00985 PF02659 Putative manganese efflux pump JW646_00990 PF01757 Acyltransferase family JW646_00990 PF00842 Alanine racemase, C-terminal domain JW646_00990 PF01168 Alanine racemase, N-terminal domain JW646_01005 PF13486 Reductive dehalogenase subunit JW646_01005 PF12838 4Fe-4S dicluster domain JW646_01010 PF17099 Tryptophan transporter TrpP JW646_01015 PF01784 NIF3 (NGG1p interacting factor 3) JW646_01020 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JW646_01025 PF03979 Sigma-70 factor, region 1.1 JW646_01025 PF00140 Sigma-70 factor, region 1.2 JW646_01025 PF04542 Sigma-70 region 2 JW646_01025 PF04539 Sigma-70 region 3 JW646_01025 PF04545 Sigma-70, region 4 JW646_01030 PF08275 DNA primase catalytic core, N-terminal domain JW646_01030 PF01807 CHC2 zinc finger JW646_01030 PF10410 DnaB-helicase binding domain of primase JW646_01040 PF07732 Multicopper oxidase JW646_01040 PF00394 Multicopper oxidase JW646_01040 PF07731 Multicopper oxidase JW646_01055 PF01522 Polysaccharide deacetylase JW646_01060 PF00188 Cysteine-rich secretory protein family JW646_01060 PF14504 CAP-associated N-terminal JW646_01085 PF04294 VanW like protein JW646_01105 PF10417 C-terminal domain of 1-Cys peroxiredoxin JW646_01105 PF00578 AhpC/TSA family JW646_01115 PF12833 Helix-turn-helix domain JW646_01115 PF06445 GyrI-like small molecule binding domain JW646_01210 PF00436 Single-strand binding protein family JW646_01265 PF01381 Helix-turn-helix JW646_01315 PF00041 Fibronectin type III domain JW646_01315 PF00704 Glycosyl hydrolases family 18 JW646_01325 PF01699 Sodium/calcium exchanger protein JW646_01335 PF13307 Helicase C-terminal domain JW646_01335 PF04851 Type III restriction enzyme, res subunit JW646_01335 PF00929 Exonuclease JW646_01340 PF01522 Polysaccharide deacetylase JW646_01355 PF06445 GyrI-like small molecule binding domain JW646_01355 PF13411 MerR HTH family regulatory protein JW646_01375 PF12437 Glutamine synthetase type III N terminal JW646_01375 PF00120 Glutamine synthetase, catalytic domain JW646_01375 PF18318 Glutamine synthetase C-terminal domain JW646_01385 PF12679 ABC-2 family transporter protein JW646_01390 PF00005 ABC transporter JW646_01395 PF00082 Subtilase family JW646_01400 PF00854 POT family JW646_01410 PF00581 Rhodanese-like domain JW646_01415 PF00258 Flavodoxin JW646_01420 PF00664 ABC transporter transmembrane region JW646_01420 PF00005 ABC transporter JW646_01450 PF00923 Transaldolase/Fructose-6-phosphate aldolase JW646_01455 PF04294 VanW like protein JW646_01460 PF04055 Radical SAM superfamily JW646_01460 PF16199 Radical_SAM C-terminal domain JW646_01465 PF00005 ABC transporter JW646_01485 PF13188 PAS domain JW646_01485 PF00158 Sigma-54 interaction domain JW646_01485 PF02954 Bacterial regulatory protein, Fis family JW646_01490 PF00805 Pentapeptide repeats (8 copies) JW646_01495 PF01965 DJ-1/PfpI family JW646_01510 PF18146 Damage-inducible protein CinA KH domain JW646_01510 PF02464 Competence-damaged protein JW646_01510 PF00994 Probable molybdopterin binding domain JW646_01520 PF07739 TipAS antibiotic-recognition domain JW646_01520 PF13411 MerR HTH family regulatory protein JW646_01535 PF17932 Tetracyclin repressor-like, C-terminal domain JW646_01535 PF00440 Bacterial regulatory proteins, tetR family JW646_01545 PF01381 Helix-turn-helix JW646_01550 PF05816 Toxic anion resistance protein (TelA) JW646_01575 PF00563 EAL domain JW646_01575 PF00990 Diguanylate cyclase, GGDEF domain JW646_01575 PF03707 Bacterial signalling protein N terminal repeat JW646_01580 PF01638 HxlR-like helix-turn-helix JW646_01585 PF00881 Nitroreductase family JW646_01610 PF01980 tRNA-methyltransferase O JW646_01610 PF18389 TrmO C-terminal domain JW646_01615 PF06445 GyrI-like small molecule binding domain JW646_01615 PF13411 MerR HTH family regulatory protein JW646_01625 PF13419 Haloacid dehalogenase-like hydrolase JW646_01640 PF09962 Uncharacterized conserved protein (DUF2196) JW646_01675 PF01381 Helix-turn-helix JW646_01675 PF08671 Anti-repressor SinI JW646_01730 PF00571 CBS domain JW646_01735 PF07070 SpoOM protein JW646_01800 PF00990 Diguanylate cyclase, GGDEF domain JW646_01870 PF01367 5'-3' exonuclease, C-terminal SAM fold JW646_01870 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JW646_01870 PF00476 DNA polymerase family A JW646_01890 PF16403 Domain of unknown function (DUF5011) JW646_01900 PF00990 Diguanylate cyclase, GGDEF domain JW646_01900 PF17158 Membrane-associated sensor, integral membrane domain JW646_01905 PF13520 Amino acid permease JW646_01910 PF00654 Voltage gated chloride channel JW646_01920 PF05525 Branched-chain amino acid transport protein JW646_01935 PF00072 Response regulator receiver domain JW646_01935 PF04397 LytTr DNA-binding domain JW646_01950 PF02515 CoA-transferase family III JW646_01965 PF05525 Branched-chain amino acid transport protein JW646_01970 PF01012 Electron transfer flavoprotein domain JW646_01970 PF00766 Electron transfer flavoprotein FAD-binding domain JW646_01975 PF01012 Electron transfer flavoprotein domain JW646_01980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JW646_01980 PF02770 Acyl-CoA dehydrogenase, middle domain JW646_01980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JW646_01985 PF01180 Dihydroorotate dehydrogenase JW646_01990 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_01990 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JW646_01995 PF01180 Dihydroorotate dehydrogenase JW646_02000 PF00356 Bacterial regulatory proteins, lacI family JW646_02005 PF01546 Peptidase family M20/M25/M40 JW646_02010 PF01979 Amidohydrolase family JW646_02015 PF06496 Protein of unknown function (DUF1097) JW646_02025 PF00583 Acetyltransferase (GNAT) family JW646_02045 PF01008 Initiation factor 2 subunit family JW646_02050 PF01636 Phosphotransferase enzyme family JW646_02060 PF00596 Class II Aldolase and Adducin N-terminal domain JW646_02065 PF08220 DeoR-like helix-turn-helix domain JW646_02065 PF00455 DeoR C terminal sensor domain JW646_02070 PF00465 Iron-containing alcohol dehydrogenase JW646_02075 PF01053 Cys/Met metabolism PLP-dependent enzyme JW646_02080 PF01228 Glycine radical JW646_02080 PF02901 Pyruvate formate lyase-like JW646_02085 PF02447 GntP family permease JW646_02090 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JW646_02095 PF07005 Sugar-binding N-terminal domain JW646_02095 PF17042 Nucleotide-binding C-terminal domain JW646_02100 PF08220 DeoR-like helix-turn-helix domain JW646_02100 PF00455 DeoR C terminal sensor domain JW646_02105 PF00005 ABC transporter JW646_02110 PF00528 Binding-protein-dependent transport system inner membrane component JW646_02115 PF00497 Bacterial extracellular solute-binding proteins, family 3 JW646_02135 PF00005 ABC transporter JW646_02140 PF00005 ABC transporter JW646_02145 PF00528 Binding-protein-dependent transport system inner membrane component JW646_02145 PF12911 N-terminal TM domain of oligopeptide transport permease C JW646_02150 PF00528 Binding-protein-dependent transport system inner membrane component JW646_02155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JW646_02165 PF03466 LysR substrate binding domain JW646_02165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JW646_02170 PF08245 Mur ligase middle domain JW646_02170 PF02875 Mur ligase family, glutamate ligase domain JW646_02170 PF01225 Mur ligase family, catalytic domain JW646_02395 PF00512 His Kinase A (phospho-acceptor) domain JW646_02395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_02395 PF00672 HAMP domain JW646_02400 PF00072 Response regulator receiver domain JW646_02400 PF00486 Transcriptional regulatory protein, C terminal JW646_02410 PF01522 Polysaccharide deacetylase JW646_02415 PF03033 Glycosyltransferase family 28 N-terminal domain JW646_02415 PF04101 Glycosyltransferase family 28 C-terminal domain JW646_02420 PF03466 LysR substrate binding domain JW646_02420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JW646_02430 PF04539 Sigma-70 region 3 JW646_02430 PF04545 Sigma-70, region 4 JW646_02430 PF04542 Sigma-70 region 2 JW646_02430 PF00140 Sigma-70 factor, region 1.2 JW646_02430 PF03979 Sigma-70 factor, region 1.1 JW646_02440 PF06207 Protein of unknown function (DUF1002) JW646_02445 PF03807 NADP oxidoreductase coenzyme F420-dependent JW646_02445 PF14748 Pyrroline-5-carboxylate reductase dimerisation JW646_02450 PF02245 Methylpurine-DNA glycosylase (MPG) JW646_02460 PF03180 NLPA lipoprotein JW646_02465 PF00528 Binding-protein-dependent transport system inner membrane component JW646_02470 PF09383 NIL domain JW646_02470 PF00005 ABC transporter JW646_02480 PF04055 Radical SAM superfamily JW646_02480 PF06968 Biotin and Thiamin Synthesis associated domain JW646_02485 PF02867 Ribonucleotide reductase, barrel domain JW646_02485 PF03477 ATP cone domain JW646_02485 PF00317 Ribonucleotide reductase, all-alpha domain JW646_02490 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JW646_02495 PF00571 CBS domain JW646_02495 PF00005 ABC transporter JW646_02500 PF04551 GcpE protein JW646_02505 PF02163 Peptidase family M50 JW646_02505 PF17820 PDZ domain JW646_02510 PF13288 DXP reductoisomerase C-terminal domain JW646_02510 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JW646_02510 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JW646_02520 PF01255 Putative undecaprenyl diphosphate synthase JW646_02530 PF01765 Ribosome recycling factor JW646_02535 PF00696 Amino acid kinase family JW646_02540 PF00889 Elongation factor TS JW646_02545 PF00318 Ribosomal protein S2 JW646_02550 PF07943 Penicillin-binding protein 5, C-terminal domain JW646_02550 PF00768 D-alanyl-D-alanine carboxypeptidase JW646_02580 PF01235 Sodium:alanine symporter family JW646_02590 PF01594 AI-2E family transporter JW646_02600 PF04294 VanW like protein JW646_02625 PF01476 LysM domain JW646_02625 PF06725 3D domain JW646_02630 PF01476 LysM domain JW646_02630 PF06725 3D domain JW646_02640 PF01641 SelR domain JW646_02640 PF01625 Peptide methionine sulfoxide reductase JW646_02645 PF00795 Carbon-nitrogen hydrolase JW646_02660 PF01411 tRNA synthetases class II (A) JW646_02660 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JW646_02660 PF02272 DHHA1 domain JW646_02665 PF04073 Aminoacyl-tRNA editing domain JW646_02670 PF01967 MoaC family JW646_02705 PF01734 Patatin-like phospholipase JW646_02710 PF00082 Subtilase family JW646_02710 PF13860 FlgD Ig-like domain JW646_02710 PF05922 Peptidase inhibitor I9 JW646_02710 PF02225 PA domain JW646_02710 PF00082 Subtilase family JW646_02710 PF13860 FlgD Ig-like domain JW646_02710 PF05922 Peptidase inhibitor I9 JW646_02710 PF02225 PA domain JW646_02715 PF13860 FlgD Ig-like domain JW646_02715 PF00082 Subtilase family JW646_02715 PF05922 Peptidase inhibitor I9 JW646_02715 PF02225 PA domain JW646_02720 PF02225 PA domain JW646_02720 PF06280 Fn3-like domain JW646_02720 PF00082 Subtilase family JW646_02725 PF13860 FlgD Ig-like domain JW646_02725 PF05922 Peptidase inhibitor I9 JW646_02725 PF02225 PA domain JW646_02725 PF00082 Subtilase family JW646_02730 PF01336 OB-fold nucleic acid binding domain JW646_02730 PF00152 tRNA synthetases class II (D, K and N) JW646_02740 PF00082 Subtilase family JW646_02740 PF02225 PA domain JW646_02740 PF05922 Peptidase inhibitor I9 JW646_02740 PF13860 FlgD Ig-like domain JW646_02745 PF06280 Fn3-like domain JW646_02745 PF00082 Subtilase family JW646_02745 PF02225 PA domain JW646_02770 PF07883 Cupin domain JW646_02780 PF01266 FAD dependent oxidoreductase JW646_02780 PF00355 Rieske [2Fe-2S] domain JW646_02785 PF00392 Bacterial regulatory proteins, gntR family JW646_02785 PF07702 UTRA domain JW646_02790 PF01979 Amidohydrolase family JW646_02795 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JW646_02800 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JW646_02805 PF04794 YdjC-like protein JW646_02810 PF02056 Family 4 glycosyl hydrolase JW646_02810 PF11975 Family 4 glycosyl hydrolase C-terminal domain JW646_02815 PF02378 Phosphotransferase system, EIIC JW646_02820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JW646_02825 PF07702 UTRA domain JW646_02825 PF00392 Bacterial regulatory proteins, gntR family JW646_02830 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JW646_02830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JW646_02835 PF00294 pfkB family carbohydrate kinase JW646_02840 PF05043 Mga helix-turn-helix domain JW646_02840 PF08279 HTH domain JW646_02840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JW646_02840 PF00874 PRD domain JW646_02845 PF01751 Toprim domain JW646_02845 PF01131 DNA topoisomerase JW646_02865 PF00248 Aldo/keto reductase family JW646_02870 PF03099 Biotin/lipoate A/B protein ligase family JW646_02870 PF10437 Bacterial lipoate protein ligase C-terminus JW646_02875 PF04055 Radical SAM superfamily JW646_02885 PF00881 Nitroreductase family JW646_02890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JW646_02890 PF03466 LysR substrate binding domain JW646_02895 PF02535 ZIP Zinc transporter JW646_02900 PF01975 Survival protein SurE JW646_02910 PF08281 Sigma-70, region 4 JW646_02910 PF04542 Sigma-70 region 2 JW646_02915 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JW646_02915 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JW646_02925 PF00565 Staphylococcal nuclease homologue JW646_02935 PF04607 Region found in RelA / SpoT proteins JW646_02950 PF00005 ABC transporter JW646_02950 PF08402 TOBE domain JW646_02955 PF00528 Binding-protein-dependent transport system inner membrane component JW646_02960 PF00528 Binding-protein-dependent transport system inner membrane component JW646_02965 PF13416 Bacterial extracellular solute-binding protein JW646_02975 PF09335 SNARE associated Golgi protein JW646_02985 PF00005 ABC transporter JW646_02990 PF12704 MacB-like periplasmic core domain JW646_02990 PF02687 FtsX-like permease family JW646_03005 PF09335 SNARE associated Golgi protein JW646_03020 PF00535 Glycosyl transferase family 2 JW646_03025 PF00581 Rhodanese-like domain JW646_03035 PF09861 Lactate racemase N-terminal domain JW646_03050 PF00155 Aminotransferase class I and II JW646_03090 PF00905 Penicillin binding protein transpeptidase domain JW646_03090 PF00912 Transglycosylase JW646_03100 PF03793 PASTA domain JW646_03100 PF00069 Protein kinase domain JW646_03110 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JW646_03110 PF02811 PHP domain JW646_03110 PF00929 Exonuclease JW646_03110 PF14579 Helix-hairpin-helix motif JW646_03110 PF07733 Bacterial DNA polymerase III alpha NTPase domain JW646_03115 PF01551 Peptidase family M23 JW646_03120 PF18075 FtsX extracellular domain JW646_03120 PF02687 FtsX-like permease family JW646_03125 PF00005 ABC transporter JW646_03130 PF00082 Subtilase family JW646_03140 PF14480 DNA polymerase III polC-type N-terminus I JW646_03140 PF11490 DNA polymerase III polC-type N-terminus II JW646_03140 PF07733 Bacterial DNA polymerase III alpha NTPase domain JW646_03140 PF14579 Helix-hairpin-helix motif JW646_03140 PF02811 PHP domain JW646_03140 PF00929 Exonuclease JW646_03140 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JW646_03145 PF01171 PP-loop family JW646_03160 PF05067 Manganese containing catalase JW646_03175 PF01520 N-acetylmuramoyl-L-alanine amidase JW646_03175 PF11741 AMIN domain JW646_03180 PF12671 Putative amidase domain JW646_03190 PF00877 NlpC/P60 family JW646_03195 PF00535 Glycosyl transferase family 2 JW646_03200 PF02397 Bacterial sugar transferase JW646_03205 PF03734 L,D-transpeptidase catalytic domain JW646_03225 PF01773 Na+ dependent nucleoside transporter N-terminus JW646_03225 PF07670 Nucleoside recognition JW646_03225 PF07662 Na+ dependent nucleoside transporter C-terminus JW646_03230 PF05525 Branched-chain amino acid transport protein JW646_03235 PF01476 LysM domain JW646_03235 PF06725 3D domain JW646_03240 PF02583 Metal-sensitive transcriptional repressor JW646_03245 PF01554 MatE JW646_03250 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JW646_03255 PF02152 Dihydroneopterin aldolase JW646_03260 PF00809 Pterin binding enzyme JW646_03265 PF01227 GTP cyclohydrolase I JW646_03285 PF01048 Phosphorylase superfamily JW646_03290 PF07662 Na+ dependent nucleoside transporter C-terminus JW646_03290 PF07670 Nucleoside recognition JW646_03290 PF01773 Na+ dependent nucleoside transporter N-terminus JW646_03295 PF01676 Metalloenzyme superfamily JW646_03300 PF01791 DeoC/LacD family aldolase JW646_03305 PF02885 Glycosyl transferase family, helical bundle domain JW646_03305 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JW646_03305 PF00591 Glycosyl transferase family, a/b domain JW646_03310 PF02608 ABC transporter substrate-binding protein PnrA-like JW646_03315 PF12833 Helix-turn-helix domain JW646_03315 PF00072 Response regulator receiver domain JW646_03320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_03320 PF06580 Histidine kinase JW646_03320 PF00672 HAMP domain JW646_03320 PF02743 Cache domain JW646_03330 PF18267 Rubredoxin NAD+ reductase C-terminal domain JW646_03330 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_03340 PF03063 Prismane/CO dehydrogenase family JW646_03350 PF09278 MerR, DNA binding JW646_03350 PF00376 MerR family regulatory protein JW646_03355 PF01554 MatE JW646_03360 PF00916 Sulfate permease family JW646_03360 PF01740 STAS domain JW646_03365 PF11490 DNA polymerase III polC-type N-terminus II JW646_03365 PF01336 OB-fold nucleic acid binding domain JW646_03365 PF00929 Exonuclease JW646_03365 PF02811 PHP domain JW646_03365 PF14579 Helix-hairpin-helix motif JW646_03365 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JW646_03365 PF07733 Bacterial DNA polymerase III alpha NTPase domain JW646_03380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JW646_03385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JW646_03385 PF00005 ABC transporter JW646_03390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JW646_03390 PF00005 ABC transporter JW646_03395 PF12911 N-terminal TM domain of oligopeptide transport permease C JW646_03395 PF00528 Binding-protein-dependent transport system inner membrane component JW646_03400 PF00528 Binding-protein-dependent transport system inner membrane component JW646_03405 PF01554 MatE JW646_03410 PF00005 ABC transporter JW646_03415 PF01032 FecCD transport family JW646_03420 PF01032 FecCD transport family JW646_03425 PF01497 Periplasmic binding protein JW646_03430 PF00989 PAS fold JW646_03430 PF00512 His Kinase A (phospho-acceptor) domain JW646_03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_03440 PF00501 AMP-binding enzyme JW646_03440 PF14535 AMP-binding enzyme C-terminal domain JW646_03445 PF06463 Molybdenum Cofactor Synthesis C JW646_03445 PF04055 Radical SAM superfamily JW646_03455 PF00266 Aminotransferase class-V JW646_03460 PF12804 MobA-like NTP transferase domain JW646_03465 PF02625 XdhC and CoxI family JW646_03465 PF13478 XdhC Rossmann domain JW646_03490 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JW646_03490 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JW646_03490 PF00111 2Fe-2S iron-sulfur cluster binding domain JW646_03490 PF01799 [2Fe-2S] binding domain JW646_03500 PF08245 Mur ligase middle domain JW646_03500 PF02875 Mur ligase family, glutamate ligase domain JW646_03500 PF01225 Mur ligase family, catalytic domain JW646_03505 PF01177 Asp/Glu/Hydantoin racemase JW646_03515 PF00072 Response regulator receiver domain JW646_03520 PF01739 CheR methyltransferase, SAM binding domain JW646_03520 PF03705 CheR methyltransferase, all-alpha domain JW646_03525 PF01584 CheW-like domain JW646_03530 PF03975 CheD chemotactic sensory transduction JW646_03535 PF04509 CheC-like family JW646_03540 PF01339 CheB methylesterase JW646_03540 PF00072 Response regulator receiver domain JW646_03545 PF07194 P2 response regulator binding domain JW646_03545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_03545 PF01584 CheW-like domain JW646_03545 PF02895 Signal transducing histidine kinase, homodimeric domain JW646_03545 PF01627 Hpt domain JW646_03550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JW646_03550 PF02203 Tar ligand binding domain homologue JW646_03550 PF00672 HAMP domain JW646_03565 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JW646_03565 PF04509 CheC-like family JW646_03570 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JW646_03570 PF02154 Flagellar motor switch protein FliM JW646_03575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JW646_03575 PF00460 Flagella basal body rod protein JW646_03580 PF00460 Flagella basal body rod protein JW646_03580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JW646_03585 PF04542 Sigma-70 region 2 JW646_03585 PF04539 Sigma-70 region 3 JW646_03585 PF04545 Sigma-70, region 4 JW646_03590 PF00771 FHIPEP family JW646_03595 PF01312 FlhB HrpN YscU SpaS Family JW646_03600 PF01313 Bacterial export proteins, family 3 JW646_03605 PF00813 FliP family JW646_03615 PF13677 Membrane MotB of proton-channel complex MotA/MotB JW646_03615 PF00691 OmpA family JW646_03620 PF01618 MotA/TolQ/ExbB proton channel family JW646_03625 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JW646_03625 PF00460 Flagella basal body rod protein JW646_03645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JW646_03645 PF02874 ATP synthase alpha/beta family, beta-barrel domain JW646_03645 PF18269 T3SS EscN ATPase C-terminal domain JW646_03655 PF01706 FliG C-terminal domain JW646_03655 PF14841 FliG middle domain JW646_03655 PF14842 FliG N-terminal domain JW646_03660 PF01514 Secretory protein of YscJ/FliF family JW646_03660 PF08345 Flagellar M-ring protein C-terminal JW646_03665 PF02049 Flagellar hook-basal body complex protein FliE JW646_03670 PF00460 Flagella basal body rod protein JW646_03670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JW646_03675 PF07559 Flagellar basal body protein FlaE JW646_03675 PF00460 Flagella basal body rod protein JW646_03675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JW646_03685 PF16363 GDP-mannose 4,6 dehydratase JW646_03690 PF00483 Nucleotidyl transferase JW646_03705 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JW646_03730 PF00535 Glycosyl transferase family 2 JW646_03740 PF01467 Cytidylyltransferase-like JW646_03745 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JW646_03750 PF00535 Glycosyl transferase family 2 JW646_03750 PF13181 Tetratricopeptide repeat JW646_03755 PF00669 Bacterial flagellin N-terminal helical region JW646_03755 PF00700 Bacterial flagellin C-terminal helical region JW646_03765 PF07195 Flagellar hook-associated protein 2 C-terminus JW646_03765 PF07196 Flagellin hook IN motif JW646_03765 PF02465 Flagellar hook-associated protein 2 N-terminus JW646_03775 PF02599 Global regulator protein family JW646_03780 PF02623 FliW protein JW646_03790 PF00460 Flagella basal body rod protein JW646_03790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JW646_03805 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JW646_03815 PF01464 Transglycosylase SLT domain JW646_03820 PF06874 Firmicute fructose-1,6-bisphosphatase JW646_03830 PF07664 Ferrous iron transport protein B C terminus JW646_03830 PF17910 FeoB cytosolic helical domain JW646_03830 PF02421 Ferrous iron transport protein B JW646_03830 PF07670 Nucleoside recognition JW646_03835 PF04023 FeoA domain JW646_03855 PF01047 MarR family JW646_03865 PF02463 RecF/RecN/SMC N terminal domain JW646_03875 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JW646_03875 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JW646_03875 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JW646_03875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JW646_03875 PF10371 Domain of unknown function JW646_03880 PF01791 DeoC/LacD family aldolase JW646_03885 PF06130 Phosphate propanoyltransferase JW646_03890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JW646_03895 PF01761 3-dehydroquinate synthase JW646_03900 PF01264 Chorismate synthase JW646_03905 PF03553 Na+/H+ antiporter family JW646_03910 PF01546 Peptidase family M20/M25/M40 JW646_03915 PF01235 Sodium:alanine symporter family JW646_03920 PF01168 Alanine racemase, N-terminal domain JW646_03925 PF13941 MutL protein JW646_03930 PF02310 B12 binding domain JW646_03930 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit JW646_03930 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase JW646_03935 PF16552 D-ornithine 4,5-aminomutase alpha-subunit JW646_03940 PF00291 Pyridoxal-phosphate dependent enzyme JW646_03955 PF02954 Bacterial regulatory protein, Fis family JW646_03955 PF13426 PAS domain JW646_03955 PF00158 Sigma-54 interaction domain JW646_03990 PF02659 Putative manganese efflux pump JW646_03995 PF00269 Small, acid-soluble spore proteins, alpha/beta type JW646_04005 PF01569 PAP2 superfamily JW646_04010 PF00156 Phosphoribosyl transferase domain JW646_04015 PF00155 Aminotransferase class I and II JW646_04020 PF01693 Caulimovirus viroplasmin JW646_04025 PF01661 Macro domain JW646_04040 PF03006 Haemolysin-III related JW646_04045 PF02645 Uncharacterised protein, DegV family COG1307 JW646_04060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JW646_04060 PF00205 Thiamine pyrophosphate enzyme, central domain JW646_04060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JW646_04065 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JW646_04065 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JW646_04085 PF02001 Protein of unknown function DUF134 JW646_04105 PF10609 NUBPL iron-transfer P-loop NTPase JW646_04115 PF10609 NUBPL iron-transfer P-loop NTPase JW646_04120 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_04120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JW646_04125 PF00990 Diguanylate cyclase, GGDEF domain JW646_04130 PF02645 Uncharacterised protein, DegV family COG1307 JW646_04135 PF00877 NlpC/P60 family JW646_04140 PF00574 Clp protease JW646_04155 PF03734 L,D-transpeptidase catalytic domain JW646_04180 PF13520 Amino acid permease JW646_04185 PF00990 Diguanylate cyclase, GGDEF domain JW646_04185 PF08447 PAS fold JW646_04185 PF08448 PAS fold JW646_04185 PF00563 EAL domain JW646_04205 PF03816 Cell envelope-related transcriptional attenuator domain JW646_04215 PF07155 ECF-type riboflavin transporter, S component JW646_04220 PF00005 ABC transporter JW646_04220 PF12558 ATP-binding cassette cobalt transporter JW646_04250 PF16363 GDP-mannose 4,6 dehydratase JW646_04255 PF00483 Nucleotidyl transferase JW646_04295 PF13333 Integrase core domain JW646_04295 PF00665 Integrase core domain JW646_04295 PF13276 HTH-like domain JW646_04305 PF03275 UDP-galactopyranose mutase JW646_04335 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JW646_04340 PF04991 LicD family JW646_04355 PF02397 Bacterial sugar transferase JW646_04360 PF13614 AAA domain JW646_04370 PF00149 Calcineurin-like phosphoesterase JW646_04380 PF02463 RecF/RecN/SMC N terminal domain JW646_04415 PF00291 Pyridoxal-phosphate dependent enzyme JW646_04430 PF00158 Sigma-54 interaction domain JW646_04430 PF00072 Response regulator receiver domain JW646_04430 PF02954 Bacterial regulatory protein, Fis family JW646_04435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_04435 PF00512 His Kinase A (phospho-acceptor) domain JW646_04435 PF00989 PAS fold JW646_04435 PF13188 PAS domain JW646_04435 PF13426 PAS domain JW646_04440 PF00196 Bacterial regulatory proteins, luxR family JW646_04440 PF00072 Response regulator receiver domain JW646_04495 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JW646_04495 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JW646_04495 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JW646_04505 PF07690 Major Facilitator Superfamily JW646_04510 PF00155 Aminotransferase class I and II JW646_04515 PF01515 Phosphate acetyl/butaryl transferase JW646_04520 PF00871 Acetokinase family JW646_04525 PF03553 Na+/H+ antiporter family JW646_04530 PF09339 IclR helix-turn-helix domain JW646_04530 PF01614 Bacterial transcriptional regulator JW646_04540 PF03816 Cell envelope-related transcriptional attenuator domain JW646_04550 PF01081 KDPG and KHG aldolase JW646_04555 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JW646_04555 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JW646_04565 PF03480 Bacterial extracellular solute-binding protein, family 7 JW646_04570 PF00107 Zinc-binding dehydrogenase JW646_04570 PF08240 Alcohol dehydrogenase GroES-like domain JW646_04575 PF07729 FCD domain JW646_04575 PF00392 Bacterial regulatory proteins, gntR family JW646_04580 PF01232 Mannitol dehydrogenase Rossmann domain JW646_04580 PF08125 Mannitol dehydrogenase C-terminal domain JW646_04585 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JW646_04585 PF08666 SAF domain JW646_04590 PF01483 Proprotein convertase P-domain JW646_04590 PF04389 Peptidase family M28 JW646_04625 PF00664 ABC transporter transmembrane region JW646_04625 PF00005 ABC transporter JW646_04630 PF13186 Iron-sulfur cluster-binding domain JW646_04630 PF04055 Radical SAM superfamily JW646_04650 PF03023 Lipid II flippase MurJ JW646_04670 PF00226 DnaJ domain JW646_04670 PF01556 DnaJ C terminal domain JW646_04670 PF00684 DnaJ central domain JW646_04680 PF00149 Calcineurin-like phosphoesterase JW646_04715 PF01473 Putative cell wall binding repeat JW646_04715 PF11713 Peptidase C80 family JW646_04715 PF12919 TcdA/TcdB catalytic glycosyltransferase domain JW646_04715 PF12920 TcdA/TcdB pore forming domain JW646_04715 PF12918 TcdB toxin N-terminal helical domain JW646_04725 PF00535 Glycosyl transferase family 2 JW646_04730 PF00534 Glycosyl transferases group 1 JW646_04730 PF13439 Glycosyltransferase Family 4 JW646_04735 PF13477 Glycosyl transferase 4-like JW646_04735 PF00534 Glycosyl transferases group 1 JW646_04740 PF02397 Bacterial sugar transferase JW646_04745 PF02719 Polysaccharide biosynthesis protein JW646_04750 PF13614 AAA domain JW646_04765 PF02028 BCCT, betaine/carnitine/choline family transporter JW646_04770 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JW646_04770 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JW646_04775 PF02811 PHP domain JW646_04780 PF07687 Peptidase dimerisation domain JW646_04780 PF01546 Peptidase family M20/M25/M40 JW646_04785 PF03606 C4-dicarboxylate anaerobic carrier JW646_04820 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JW646_04820 PF02906 Iron only hydrogenase large subunit, C-terminal domain JW646_04820 PF02256 Iron hydrogenase small subunit JW646_04820 PF00037 4Fe-4S binding domain JW646_04825 PF01116 Fructose-bisphosphate aldolase class-II JW646_04830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JW646_04830 PF02378 Phosphotransferase system, EIIC JW646_04830 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JW646_04835 PF00294 pfkB family carbohydrate kinase JW646_04850 PF13416 Bacterial extracellular solute-binding protein JW646_04855 PF00528 Binding-protein-dependent transport system inner membrane component JW646_04860 PF00528 Binding-protein-dependent transport system inner membrane component JW646_04865 PF00005 ABC transporter JW646_04865 PF08402 TOBE domain JW646_04870 PF01381 Helix-turn-helix JW646_04885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_04885 PF00512 His Kinase A (phospho-acceptor) domain JW646_04890 PF00486 Transcriptional regulatory protein, C terminal JW646_04890 PF00072 Response regulator receiver domain JW646_04900 PF00005 ABC transporter JW646_04920 PF00485 Phosphoribulokinase / Uridine kinase family JW646_04935 PF13509 S1 domain JW646_04935 PF17783 CvfB-like winged helix domain JW646_04940 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain JW646_04940 PF02558 Ketopantoate reductase PanE/ApbA JW646_04955 PF02581 Thiamine monophosphate synthase JW646_04965 PF05690 Thiazole biosynthesis protein ThiG JW646_04970 PF00899 ThiF family JW646_04980 PF03949 Malic enzyme, NAD binding domain JW646_04980 PF00390 Malic enzyme, N-terminal domain JW646_04985 PF05683 Fumarase C-terminus JW646_04985 PF05681 Fumarate hydratase (Fumerase) JW646_04990 PF05681 Fumarate hydratase (Fumerase) JW646_05000 PF04055 Radical SAM superfamily JW646_05015 PF03062 MBOAT, membrane-bound O-acyltransferase family JW646_05020 PF00005 ABC transporter JW646_05025 PF02687 FtsX-like permease family JW646_05030 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JW646_05030 PF17203 Single cache domain 3 JW646_05030 PF00989 PAS fold JW646_05030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_05035 PF00072 Response regulator receiver domain JW646_05035 PF04397 LytTr DNA-binding domain JW646_05040 PF04073 Aminoacyl-tRNA editing domain JW646_05090 PF17934 Tetracyclin repressor-like, C-terminal domain JW646_05090 PF00440 Bacterial regulatory proteins, tetR family JW646_05100 PF00005 ABC transporter JW646_05110 PF00163 Ribosomal protein S4/S9 N-terminal domain JW646_05110 PF01479 S4 domain JW646_05125 PF01513 ATP-NAD kinase JW646_05135 PF07690 Major Facilitator Superfamily JW646_05140 PF00082 Subtilase family JW646_05155 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JW646_05155 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_05160 PF01266 FAD dependent oxidoreductase JW646_05195 PF05816 Toxic anion resistance protein (TelA) JW646_05205 PF00690 Cation transporter/ATPase, N-terminus JW646_05205 PF00689 Cation transporting ATPase, C-terminus JW646_05210 PF02342 TerD domain JW646_05215 PF02342 TerD domain JW646_05220 PF02342 TerD domain JW646_05235 PF03611 PTS system sugar-specific permease component JW646_05240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JW646_05245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JW646_05250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JW646_05250 PF00874 PRD domain JW646_05250 PF05043 Mga helix-turn-helix domain JW646_05250 PF08279 HTH domain JW646_05260 PF00557 Metallopeptidase family M24 JW646_05260 PF01321 Creatinase/Prolidase N-terminal domain JW646_05270 PF00005 ABC transporter JW646_05275 PF00528 Binding-protein-dependent transport system inner membrane component JW646_05285 PF12838 4Fe-4S dicluster domain JW646_05305 PF00005 ABC transporter JW646_05315 PF02608 ABC transporter substrate-binding protein PnrA-like JW646_05320 PF00990 Diguanylate cyclase, GGDEF domain JW646_05325 PF01027 Inhibitor of apoptosis-promoting Bax1 JW646_05330 PF03616 Sodium/glutamate symporter JW646_05335 PF11842 Domain of unknown function (DUF3362) JW646_05335 PF04055 Radical SAM superfamily JW646_05335 PF08497 Radical SAM N-terminal JW646_05340 PF01235 Sodium:alanine symporter family JW646_05350 PF00892 EamA-like transporter family JW646_05365 PF03551 Transcriptional regulator PadR-like family JW646_05375 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit JW646_05380 PF02436 Conserved carboxylase domain JW646_05380 PF00364 Biotin-requiring enzyme JW646_05380 PF00682 HMGL-like JW646_05390 PF00364 Biotin-requiring enzyme JW646_05390 PF00682 HMGL-like JW646_05390 PF02436 Conserved carboxylase domain JW646_05395 PF07729 FCD domain JW646_05395 PF00392 Bacterial regulatory proteins, gntR family JW646_05400 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JW646_05400 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase JW646_05405 PF08218 Citrate lyase ligase C-terminal domain JW646_05415 PF03390 2-hydroxycarboxylate transporter family JW646_05420 PF04223 Citrate lyase, alpha subunit (CitF) JW646_05425 PF03328 HpcH/HpaI aldolase/citrate lyase family JW646_05430 PF06857 Malonate decarboxylase delta subunit (MdcD) JW646_05440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JW646_05440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JW646_05440 PF01842 ACT domain JW646_05445 PF00266 Aminotransferase class-V JW646_05450 PF01594 AI-2E family transporter JW646_05455 PF00004 ATPase family associated with various cellular activities (AAA) JW646_05455 PF17862 AAA+ lid domain JW646_05455 PF06480 FtsH Extracellular JW646_05455 PF01434 Peptidase family M41 JW646_05470 PF00575 S1 RNA binding domain JW646_05475 PF03749 Sugar fermentation stimulation protein RE domain JW646_05475 PF17746 SfsA N-terminal OB domain JW646_05485 PF02417 Chromate transporter JW646_05490 PF00309 Sigma-54 factor, Activator interacting domain (AID) JW646_05490 PF04963 Sigma-54 factor, core binding domain JW646_05490 PF04552 Sigma-54, DNA binding domain JW646_05495 PF00005 ABC transporter JW646_05495 PF00664 ABC transporter transmembrane region JW646_05510 PF05544 Proline racemase JW646_05520 PF01226 Formate/nitrite transporter JW646_05525 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JW646_05535 PF00085 Thioredoxin JW646_05540 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_05550 PF09338 Glycine/sarcosine/betaine reductase component B subunits JW646_05570 PF09338 Glycine/sarcosine/betaine reductase component B subunits JW646_05575 PF00480 ROK family JW646_05580 PF00356 Bacterial regulatory proteins, lacI family JW646_05590 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JW646_05590 PF01871 AMMECR1 JW646_05600 PF01497 Periplasmic binding protein JW646_05605 PF00005 ABC transporter JW646_05610 PF01032 FecCD transport family JW646_05615 PF01032 FecCD transport family JW646_05620 PF12850 Calcineurin-like phosphoesterase superfamily domain JW646_05625 PF06445 GyrI-like small molecule binding domain JW646_05625 PF13411 MerR HTH family regulatory protein JW646_05630 PF03880 DbpA RNA binding domain JW646_05630 PF00271 Helicase conserved C-terminal domain JW646_05630 PF00270 DEAD/DEAH box helicase JW646_05640 PF01047 MarR family JW646_05645 PF00266 Aminotransferase class-V JW646_05655 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JW646_05655 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JW646_05660 PF02811 PHP domain JW646_05665 PF00923 Transaldolase/Fructose-6-phosphate aldolase JW646_05675 PF07663 Sorbitol phosphotransferase enzyme II C-terminus JW646_05675 PF03612 Sorbitol phosphotransferase enzyme II N-terminus JW646_05680 PF03608 PTS system enzyme II sorbitol-specific factor JW646_05690 PF00874 PRD domain JW646_05690 PF08279 HTH domain JW646_05690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JW646_05690 PF05043 Mga helix-turn-helix domain JW646_05695 PF00106 short chain dehydrogenase JW646_05700 PF01380 SIS domain JW646_05715 PF02673 Bacitracin resistance protein BacA JW646_05730 PF01476 LysM domain JW646_05730 PF00877 NlpC/P60 family JW646_05730 PF08239 Bacterial SH3 domain JW646_05735 PF00085 Thioredoxin JW646_05740 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_05740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JW646_05750 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JW646_05755 PF01895 PhoU domain JW646_05760 PF00005 ABC transporter JW646_05765 PF00528 Binding-protein-dependent transport system inner membrane component JW646_05770 PF00528 Binding-protein-dependent transport system inner membrane component JW646_05775 PF12849 PBP superfamily domain JW646_05800 PF04055 Radical SAM superfamily JW646_05810 PF01915 Glycosyl hydrolase family 3 C-terminal domain JW646_05810 PF00933 Glycosyl hydrolase family 3 N terminal domain JW646_05810 PF14310 Fibronectin type III-like domain JW646_05820 PF00005 ABC transporter JW646_05825 PF00392 Bacterial regulatory proteins, gntR family JW646_05825 PF00155 Aminotransferase class I and II JW646_05855 PF05525 Branched-chain amino acid transport protein JW646_05870 PF06968 Biotin and Thiamin Synthesis associated domain JW646_05870 PF04055 Radical SAM superfamily JW646_05885 PF08534 Redoxin JW646_05890 PF14824 Sirohaem biosynthesis protein central JW646_05890 PF10414 Sirohaem synthase dimerisation region JW646_05890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JW646_05900 PF00490 Delta-aminolevulinic acid dehydratase JW646_05905 PF02602 Uroporphyrinogen-III synthase HemD JW646_05905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JW646_05910 PF03900 Porphobilinogen deaminase, C-terminal domain JW646_05910 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JW646_05920 PF02571 Precorrin-6x reductase CbiJ/CobK JW646_05925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JW646_05930 PF01890 Cobalamin synthesis G C-terminus JW646_05930 PF11760 Cobalamin synthesis G N-terminal JW646_05930 PF11761 Cobalamin biosynthesis central region JW646_05935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JW646_05940 PF05175 Methyltransferase small domain JW646_05945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JW646_05950 PF01888 CbiD JW646_05955 PF02570 Precorrin-8X methylmutase JW646_05960 PF00288 GHMP kinases N terminal domain JW646_05965 PF00155 Aminotransferase class I and II JW646_05970 PF03186 CobD/Cbib protein JW646_05975 PF07685 CobB/CobQ-like glutamine amidotransferase domain JW646_05975 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JW646_05980 PF07685 CobB/CobQ-like glutamine amidotransferase domain JW646_05985 PF00005 ABC transporter JW646_05990 PF02361 Cobalt transport protein JW646_05995 PF02553 Cobalt transport protein component CbiN JW646_06000 PF01891 Cobalt uptake substrate-specific transmembrane region JW646_06015 PF00072 Response regulator receiver domain JW646_06015 PF00486 Transcriptional regulatory protein, C terminal JW646_06020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_06020 PF00512 His Kinase A (phospho-acceptor) domain JW646_06040 PF03551 Transcriptional regulator PadR-like family JW646_06055 PF13411 MerR HTH family regulatory protein JW646_06055 PF06445 GyrI-like small molecule binding domain JW646_06060 PF02554 Carbon starvation protein CstA JW646_06065 PF00072 Response regulator receiver domain JW646_06065 PF04397 LytTr DNA-binding domain JW646_06070 PF07694 5TMR of 5TMR-LYT JW646_06070 PF06580 Histidine kinase JW646_06070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_06075 PF08279 HTH domain JW646_06075 PF02829 3H domain JW646_06080 PF02445 Quinolinate synthetase A protein JW646_06085 PF00890 FAD binding domain JW646_06090 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JW646_06090 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JW646_06095 PF01381 Helix-turn-helix JW646_06110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_06110 PF00512 His Kinase A (phospho-acceptor) domain JW646_06120 PF00005 ABC transporter JW646_06125 PF00072 Response regulator receiver domain JW646_06125 PF00486 Transcriptional regulatory protein, C terminal JW646_06130 PF01699 Sodium/calcium exchanger protein JW646_06135 PF02347 Glycine cleavage system P-protein JW646_06140 PF02347 Glycine cleavage system P-protein JW646_06145 PF12822 ECF transporter, substrate-specific component JW646_06155 PF02687 FtsX-like permease family JW646_06160 PF00005 ABC transporter JW646_06165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_06170 PF00072 Response regulator receiver domain JW646_06170 PF00486 Transcriptional regulatory protein, C terminal JW646_06180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JW646_06180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JW646_06185 PF01116 Fructose-bisphosphate aldolase class-II JW646_06190 PF00294 pfkB family carbohydrate kinase JW646_06200 PF12833 Helix-turn-helix domain JW646_06215 PF00005 ABC transporter JW646_06220 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit JW646_06225 PF02785 Biotin carboxylase C-terminal domain JW646_06225 PF00289 Biotin carboxylase, N-terminal domain JW646_06225 PF00364 Biotin-requiring enzyme JW646_06225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JW646_06235 PF01039 Carboxyl transferase domain JW646_06250 PF01642 Methylmalonyl-CoA mutase JW646_06250 PF02310 B12 binding domain JW646_06255 PF02310 B12 binding domain JW646_06255 PF01642 Methylmalonyl-CoA mutase JW646_06260 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JW646_06260 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JW646_06265 PF06826 Predicted Permease Membrane Region JW646_06265 PF02080 TrkA-C domain JW646_06270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JW646_06270 PF03466 LysR substrate binding domain JW646_06280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JW646_06280 PF03466 LysR substrate binding domain JW646_06310 PF03170 Bacterial cellulose synthase subunit JW646_06350 PF00578 AhpC/TSA family JW646_06355 PF02350 UDP-N-acetylglucosamine 2-epimerase JW646_06360 PF10609 NUBPL iron-transfer P-loop NTPase JW646_06365 PF01923 Cobalamin adenosyltransferase JW646_06370 PF07739 TipAS antibiotic-recognition domain JW646_06370 PF13411 MerR HTH family regulatory protein JW646_06375 PF05188 MutS domain II JW646_06375 PF01624 MutS domain I JW646_06375 PF00488 MutS domain V JW646_06375 PF05190 MutS family domain IV JW646_06375 PF05192 MutS domain III JW646_06390 PF01066 CDP-alcohol phosphatidyltransferase JW646_06400 PF00155 Aminotransferase class I and II JW646_06415 PF03006 Haemolysin-III related JW646_06420 PF01554 MatE JW646_06430 PF04397 LytTr DNA-binding domain JW646_06435 PF02915 Rubrerythrin JW646_06440 PF02082 Transcriptional regulator JW646_06445 PF00005 ABC transporter JW646_06445 PF00571 CBS domain JW646_06455 PF00528 Binding-protein-dependent transport system inner membrane component JW646_06470 PF10431 C-terminal, D2-small domain, of ClpB protein JW646_06470 PF00004 ATPase family associated with various cellular activities (AAA) JW646_06470 PF17871 AAA lid domain JW646_06470 PF07724 AAA domain (Cdc48 subfamily) JW646_06470 PF02861 Clp amino terminal domain, pathogenicity island component JW646_06490 PF00464 Serine hydroxymethyltransferase JW646_06495 PF02028 BCCT, betaine/carnitine/choline family transporter JW646_06505 PF04015 Domain of unknown function (DUF362) JW646_06525 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JW646_06530 PF01039 Carboxyl transferase domain JW646_06530 PF17848 Acetyl-coA carboxylase zinc finger domain JW646_06535 PF00289 Biotin carboxylase, N-terminal domain JW646_06535 PF02785 Biotin carboxylase C-terminal domain JW646_06535 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JW646_06540 PF07977 FabA-like domain JW646_06545 PF00364 Biotin-requiring enzyme JW646_06550 PF00109 Beta-ketoacyl synthase, N-terminal domain JW646_06550 PF02801 Beta-ketoacyl synthase, C-terminal domain JW646_06560 PF00698 Acyl transferase domain JW646_06565 PF03060 Nitronate monooxygenase JW646_06570 PF00550 Phosphopantetheine attachment site JW646_06575 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JW646_06575 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JW646_06580 PF01648 4'-phosphopantetheinyl transferase superfamily JW646_06585 PF00171 Aldehyde dehydrogenase family JW646_06585 PF00465 Iron-containing alcohol dehydrogenase JW646_06590 PF00005 ABC transporter JW646_06595 PF01032 FecCD transport family JW646_06645 PF00528 Binding-protein-dependent transport system inner membrane component JW646_06650 PF00005 ABC transporter JW646_06650 PF09383 NIL domain JW646_06655 PF03180 NLPA lipoprotein JW646_06660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_06660 PF00512 His Kinase A (phospho-acceptor) domain JW646_06665 PF00072 Response regulator receiver domain JW646_06665 PF00486 Transcriptional regulatory protein, C terminal JW646_06670 PF00085 Thioredoxin JW646_06675 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_06680 PF00255 Glutathione peroxidase JW646_06685 PF01047 MarR family JW646_06695 PF00512 His Kinase A (phospho-acceptor) domain JW646_06695 PF00989 PAS fold JW646_06695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_06695 PF16736 Single Cache-like JW646_06710 PF01614 Bacterial transcriptional regulator JW646_06710 PF09339 IclR helix-turn-helix domain JW646_06715 PF00056 lactate/malate dehydrogenase, NAD binding domain JW646_06715 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JW646_06720 PF07670 Nucleoside recognition JW646_06780 PF00528 Binding-protein-dependent transport system inner membrane component JW646_06785 PF00005 ABC transporter JW646_06785 PF09383 NIL domain JW646_06790 PF00294 pfkB family carbohydrate kinase JW646_06795 PF01116 Fructose-bisphosphate aldolase class-II JW646_06805 PF01979 Amidohydrolase family JW646_06810 PF01380 SIS domain JW646_06815 PF03610 PTS system fructose IIA component JW646_06830 PF03830 PTS system sorbose subfamily IIB component JW646_06835 PF03609 PTS system sorbose-specific iic component JW646_06840 PF03613 PTS system mannose/fructose/sorbose family IID component JW646_06845 PF00005 ABC transporter JW646_06850 PF12704 MacB-like periplasmic core domain JW646_06850 PF02687 FtsX-like permease family JW646_06855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_06855 PF00072 Response regulator receiver domain JW646_06855 PF00512 His Kinase A (phospho-acceptor) domain JW646_06855 PF09308 LuxQ, periplasmic JW646_06860 PF00486 Transcriptional regulatory protein, C terminal JW646_06860 PF00072 Response regulator receiver domain JW646_06870 PF12833 Helix-turn-helix domain JW646_06870 PF06445 GyrI-like small molecule binding domain JW646_06880 PF00860 Permease family JW646_06990 PF04002 RadC-like JAB domain JW646_07025 PF14659 Phage integrase, N-terminal SAM-like domain JW646_07025 PF00589 Phage integrase family JW646_07055 PF01668 SmpB protein JW646_07070 PF02659 Putative manganese efflux pump JW646_07080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JW646_07085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JW646_07085 PF00005 ABC transporter JW646_07090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JW646_07090 PF00005 ABC transporter JW646_07095 PF00528 Binding-protein-dependent transport system inner membrane component JW646_07095 PF12911 N-terminal TM domain of oligopeptide transport permease C JW646_07100 PF00528 Binding-protein-dependent transport system inner membrane component JW646_07105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_07110 PF00486 Transcriptional regulatory protein, C terminal JW646_07110 PF00072 Response regulator receiver domain JW646_07115 PF02687 FtsX-like permease family JW646_07120 PF00005 ABC transporter JW646_07125 PF08239 Bacterial SH3 domain JW646_07125 PF01183 Glycosyl hydrolases family 25 JW646_07130 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JW646_07135 PF13426 PAS domain JW646_07135 PF00672 HAMP domain JW646_07135 PF00512 His Kinase A (phospho-acceptor) domain JW646_07135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_07140 PF00486 Transcriptional regulatory protein, C terminal JW646_07140 PF00072 Response regulator receiver domain JW646_07145 PF02557 D-alanyl-D-alanine carboxypeptidase JW646_07150 PF03063 Prismane/CO dehydrogenase family JW646_07160 PF00575 S1 RNA binding domain JW646_07160 PF00773 RNB domain JW646_07160 PF17876 Cold shock domain JW646_07160 PF08206 Ribonuclease B OB domain JW646_07170 PF08000 Bacterial PH domain JW646_07180 PF01641 SelR domain JW646_07180 PF01625 Peptide methionine sulfoxide reductase JW646_07185 PF03061 Thioesterase superfamily JW646_07190 PF00766 Electron transfer flavoprotein FAD-binding domain JW646_07190 PF01012 Electron transfer flavoprotein domain JW646_07195 PF01012 Electron transfer flavoprotein domain JW646_07200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JW646_07200 PF02770 Acyl-CoA dehydrogenase, middle domain JW646_07200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JW646_07205 PF00356 Bacterial regulatory proteins, lacI family JW646_07210 PF00224 Pyruvate kinase, barrel domain JW646_07210 PF00391 PEP-utilising enzyme, mobile domain JW646_07210 PF02887 Pyruvate kinase, alpha/beta domain JW646_07215 PF03952 Enolase, N-terminal domain JW646_07215 PF00113 Enolase, C-terminal TIM barrel domain JW646_07220 PF01676 Metalloenzyme superfamily JW646_07220 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JW646_07225 PF00121 Triosephosphate isomerase JW646_07230 PF00162 Phosphoglycerate kinase JW646_07235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JW646_07235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JW646_07240 PF04198 Putative sugar-binding domain JW646_07250 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_07250 PF04324 BFD-like [2Fe-2S] binding domain JW646_07255 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_07255 PF04324 BFD-like [2Fe-2S] binding domain JW646_07260 PF04309 Glycerol-3-phosphate responsive antiterminator JW646_07265 PF03009 Glycerophosphoryl diester phosphodiesterase family JW646_07270 PF01235 Sodium:alanine symporter family JW646_07275 PF00005 ABC transporter JW646_07280 PF00528 Binding-protein-dependent transport system inner membrane component JW646_07285 PF00497 Bacterial extracellular solute-binding proteins, family 3 JW646_07290 PF00155 Aminotransferase class I and II JW646_07370 PF00005 ABC transporter JW646_07375 PF00392 Bacterial regulatory proteins, gntR family JW646_07380 PF01430 Hsp33 protein JW646_07385 PF13649 Methyltransferase domain JW646_07395 PF07687 Peptidase dimerisation domain JW646_07395 PF01546 Peptidase family M20/M25/M40 JW646_07405 PF00512 His Kinase A (phospho-acceptor) domain JW646_07405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_07405 PF00672 HAMP domain JW646_07405 PF13426 PAS domain JW646_07410 PF00486 Transcriptional regulatory protein, C terminal JW646_07410 PF00072 Response regulator receiver domain JW646_07420 PF02687 FtsX-like permease family JW646_07420 PF00005 ABC transporter JW646_07420 PF12704 MacB-like periplasmic core domain JW646_07430 PF03313 Serine dehydratase alpha chain JW646_07430 PF03315 Serine dehydratase beta chain JW646_07435 PF02774 Semialdehyde dehydrogenase, dimerisation domain JW646_07435 PF01118 Semialdehyde dehydrogenase, NAD binding domain JW646_07440 PF00701 Dihydrodipicolinate synthetase family JW646_07445 PF05173 Dihydrodipicolinate reductase, C-terminus JW646_07445 PF01113 Dihydrodipicolinate reductase, N-terminus JW646_07450 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JW646_07450 PF14602 Hexapeptide repeat of succinyl-transferase JW646_07450 PF00132 Bacterial transferase hexapeptide (six repeats) JW646_07460 PF04172 LrgB-like family JW646_07465 PF03788 LrgA family JW646_07470 PF00579 tRNA synthetases class I (W and Y) JW646_07480 PF00156 Phosphoribosyl transferase domain JW646_07485 PF03313 Serine dehydratase alpha chain JW646_07490 PF00158 Sigma-54 interaction domain JW646_07490 PF02954 Bacterial regulatory protein, Fis family JW646_07490 PF13188 PAS domain JW646_07505 PF01522 Polysaccharide deacetylase JW646_07510 PF00269 Small, acid-soluble spore proteins, alpha/beta type JW646_07530 PF08245 Mur ligase middle domain JW646_07530 PF02875 Mur ligase family, glutamate ligase domain JW646_07535 PF00133 tRNA synthetases class I (I, L, M and V) JW646_07535 PF08264 Anticodon-binding domain of tRNA JW646_07535 PF10458 Valyl tRNA synthetase tRNA binding arm JW646_07540 PF01522 Polysaccharide deacetylase JW646_07555 PF01895 PhoU domain JW646_07560 PF00005 ABC transporter JW646_07565 PF00528 Binding-protein-dependent transport system inner membrane component JW646_07570 PF00528 Binding-protein-dependent transport system inner membrane component JW646_07575 PF00156 Phosphoribosyl transferase domain JW646_07580 PF00860 Permease family JW646_07585 PF12849 PBP superfamily domain JW646_07595 PF01432 Peptidase family M3 JW646_07595 PF08439 Oligopeptidase F JW646_07600 PF02308 MgtC family JW646_07605 PF00924 Mechanosensitive ion channel JW646_07625 PF02421 Ferrous iron transport protein B JW646_07625 PF07670 Nucleoside recognition JW646_07625 PF17910 FeoB cytosolic helical domain JW646_07625 PF07664 Ferrous iron transport protein B C terminus JW646_07640 PF13180 PDZ domain JW646_07645 PF00342 Phosphoglucose isomerase JW646_07650 PF02690 Na+/Pi-cotransporter JW646_07685 PF07963 Prokaryotic N-terminal methylation motif JW646_07685 PF00114 Pilin (bacterial filament) JW646_07690 PF00482 Type II secretion system (T2SS), protein F JW646_07695 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JW646_07695 PF00437 Type II/IV secretion system protein JW646_07705 PF01584 CheW-like domain JW646_07705 PF00072 Response regulator receiver domain JW646_07710 PF01926 50S ribosome-binding GTPase JW646_07715 PF00004 ATPase family associated with various cellular activities (AAA) JW646_07715 PF05362 Lon protease (S16) C-terminal proteolytic domain JW646_07715 PF02190 ATP-dependent protease La (LON) substrate-binding domain JW646_07720 PF10431 C-terminal, D2-small domain, of ClpB protein JW646_07720 PF07724 AAA domain (Cdc48 subfamily) JW646_07720 PF06689 ClpX C4-type zinc finger JW646_07725 PF00574 Clp protease JW646_07730 PF05697 Bacterial trigger factor protein (TF) JW646_07730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JW646_07730 PF05698 Bacterial trigger factor protein (TF) C-terminus JW646_07740 PF03725 3' exoribonuclease family, domain 2 JW646_07740 PF01138 3' exoribonuclease family, domain 1 JW646_07745 PF00533 BRCA1 C Terminus (BRCT) domain JW646_07745 PF01653 NAD-dependent DNA ligase adenylation domain JW646_07745 PF03120 NAD-dependent DNA ligase OB-fold domain JW646_07745 PF12826 Helix-hairpin-helix motif JW646_07745 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JW646_07780 PF03063 Prismane/CO dehydrogenase family JW646_07795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JW646_07810 PF13847 Methyltransferase domain JW646_07815 PF13419 Haloacid dehalogenase-like hydrolase JW646_07820 PF00258 Flavodoxin JW646_07820 PF00753 Metallo-beta-lactamase superfamily JW646_07830 PF02423 Ornithine cyclodeaminase/mu-crystallin family JW646_07835 PF01938 TRAM domain JW646_07835 PF05958 tRNA (Uracil-5-)-methyltransferase JW646_07845 PF00209 Sodium:neurotransmitter symporter family JW646_07850 PF02887 Pyruvate kinase, alpha/beta domain JW646_07850 PF00224 Pyruvate kinase, barrel domain JW646_07850 PF00391 PEP-utilising enzyme, mobile domain JW646_07855 PF00365 Phosphofructokinase JW646_07860 PF07733 Bacterial DNA polymerase III alpha NTPase domain JW646_07860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JW646_07860 PF14579 Helix-hairpin-helix motif JW646_07860 PF02811 PHP domain JW646_07860 PF01336 OB-fold nucleic acid binding domain JW646_07865 PF10298 WhiA N-terminal LAGLIDADG-like domain JW646_07865 PF02650 WhiA C-terminal HTH domain JW646_07865 PF14527 WhiA LAGLIDADG-like domain JW646_07870 PF00293 NUDIX domain JW646_07875 PF01933 Uncharacterised protein family UPF0052 JW646_07880 PF03668 P-loop ATPase protein family JW646_07890 PF01565 FAD binding domain JW646_07890 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JW646_07900 PF13247 4Fe-4S dicluster domain JW646_07900 PF12800 4Fe-4S binding domain JW646_07905 PF02906 Iron only hydrogenase large subunit, C-terminal domain JW646_07905 PF02256 Iron hydrogenase small subunit JW646_07905 PF00037 4Fe-4S binding domain JW646_07905 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JW646_07910 PF13247 4Fe-4S dicluster domain JW646_07910 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_07910 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JW646_07915 PF01226 Formate/nitrite transporter JW646_07920 PF02634 FdhD/NarQ family JW646_07925 PF00994 Probable molybdopterin binding domain JW646_07935 PF06463 Molybdenum Cofactor Synthesis C JW646_07935 PF04055 Radical SAM superfamily JW646_07940 PF02223 Thymidylate kinase JW646_07945 PF03453 MoeA N-terminal region (domain I and II) JW646_07945 PF03454 MoeA C-terminal region (domain IV) JW646_07945 PF00994 Probable molybdopterin binding domain JW646_07950 PF12804 MobA-like NTP transferase domain JW646_07975 PF04607 Region found in RelA / SpoT proteins JW646_08000 PF02833 DHHA2 domain JW646_08000 PF01368 DHH family JW646_08005 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JW646_08010 PF02127 Aminopeptidase I zinc metalloprotease (M18) JW646_08015 PF00580 UvrD/REP helicase N-terminal domain JW646_08015 PF13361 UvrD-like helicase C-terminal domain JW646_08020 PF00092 von Willebrand factor type A domain JW646_08030 PF00465 Iron-containing alcohol dehydrogenase JW646_08035 PF00300 Histidine phosphatase superfamily (branch 1) JW646_08040 PF02654 Cobalamin-5-phosphate synthase JW646_08045 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JW646_08050 PF02277 Phosphoribosyltransferase JW646_08060 PF01471 Putative peptidoglycan binding domain JW646_08060 PF17820 PDZ domain JW646_08060 PF03572 Peptidase family S41 JW646_08065 PF01812 5-formyltetrahydrofolate cyclo-ligase family JW646_08070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JW646_08070 PF00672 HAMP domain JW646_08070 PF02743 Cache domain JW646_08080 PF02780 Transketolase, C-terminal domain JW646_08080 PF02779 Transketolase, pyrimidine binding domain JW646_08085 PF00456 Transketolase, thiamine diphosphate binding domain JW646_08090 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JW646_08105 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JW646_08105 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JW646_08110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JW646_08110 PF02874 ATP synthase alpha/beta family, beta-barrel domain JW646_08115 PF00231 ATP synthase JW646_08120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JW646_08120 PF02874 ATP synthase alpha/beta family, beta-barrel domain JW646_08120 PF00306 ATP synthase alpha/beta chain, C terminal domain JW646_08125 PF00213 ATP synthase delta (OSCP) subunit JW646_08130 PF00430 ATP synthase B/B' CF(0) JW646_08135 PF00137 ATP synthase subunit C JW646_08140 PF00119 ATP synthase A chain JW646_08160 PF02502 Ribose/Galactose Isomerase JW646_08165 PF03481 Putative GTP-binding controlling metal-binding JW646_08165 PF01300 Telomere recombination JW646_08175 PF03462 PCRF domain JW646_08175 PF00472 RF-1 domain JW646_08180 PF05175 Methyltransferase small domain JW646_08180 PF17827 PrmC N-terminal domain JW646_08185 PF07136 Protein of unknown function (DUF1385) JW646_08190 PF00265 Thymidine kinase JW646_08195 PF01197 Ribosomal protein L31 JW646_08200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JW646_08200 PF07498 Rho termination factor, N-terminal domain JW646_08200 PF07497 Rho termination factor, RNA-binding domain JW646_08205 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JW646_08210 PF00483 Nucleotidyl transferase JW646_08215 PF01432 Peptidase family M3 JW646_08215 PF08439 Oligopeptidase F JW646_08220 PF07228 Stage II sporulation protein E (SpoIIE) JW646_08225 PF01761 3-dehydroquinate synthase JW646_08225 PF02541 Ppx/GppA phosphatase family JW646_08240 PF07873 YabP family JW646_08245 PF01479 S4 domain JW646_08250 PF00216 Bacterial DNA-binding protein JW646_08255 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JW646_08255 PF03819 MazG nucleotide pyrophosphohydrolase domain JW646_08260 PF01943 Polysaccharide biosynthesis protein JW646_08260 PF14667 Polysaccharide biosynthesis C-terminal domain JW646_08265 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JW646_08265 PF15714 Stage V sporulation protein T C-terminal, transcription factor JW646_08270 PF05698 Bacterial trigger factor protein (TF) C-terminus JW646_08275 PF03461 TRCF domain JW646_08275 PF17757 UvrB interaction domain JW646_08275 PF02559 CarD-like/TRCF domain JW646_08275 PF00271 Helicase conserved C-terminal domain JW646_08275 PF00270 DEAD/DEAH box helicase JW646_08280 PF01195 Peptidyl-tRNA hydrolase JW646_08290 PF00437 Type II/IV secretion system protein JW646_08295 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JW646_08295 PF14572 Phosphoribosyl synthetase-associated domain JW646_08300 PF00483 Nucleotidyl transferase JW646_08300 PF14602 Hexapeptide repeat of succinyl-transferase JW646_08300 PF00132 Bacterial transferase hexapeptide (six repeats) JW646_08305 PF00579 tRNA synthetases class I (W and Y) JW646_08310 PF04026 SpoVG JW646_08315 PF09182 Bacterial purine repressor, N-terminal JW646_08315 PF00156 Phosphoribosyl transferase domain JW646_08320 PF08245 Mur ligase middle domain JW646_08320 PF01225 Mur ligase family, catalytic domain JW646_08320 PF02875 Mur ligase family, glutamate ligase domain JW646_08345 PF00398 Ribosomal RNA adenine dimethylase JW646_08350 PF13331 Domain of unknown function (DUF4093) JW646_08350 PF01751 Toprim domain JW646_08385 PF02096 60Kd inner membrane protein JW646_08385 PF14849 YidC periplasmic domain JW646_08410 PF04542 Sigma-70 region 2 JW646_08410 PF08281 Sigma-70, region 4 JW646_08430 PF00005 ABC transporter JW646_08435 PF00392 Bacterial regulatory proteins, gntR family JW646_08445 PF01026 TatD related DNase JW646_08450 PF01588 Putative tRNA binding domain JW646_08450 PF09334 tRNA synthetases class I (M) JW646_08450 PF08264 Anticodon-binding domain of tRNA JW646_08455 PF07670 Nucleoside recognition JW646_08465 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JW646_08465 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JW646_08465 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JW646_08470 PF01037 Lrp/AsnC ligand binding domain JW646_08480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JW646_08485 PF05175 Methyltransferase small domain JW646_08490 PF04468 PSP1 C-terminal conserved region JW646_08495 PF12169 DNA polymerase III subunits gamma and tau domain III JW646_08500 PF00625 Guanylate kinase JW646_08505 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JW646_08505 PF01276 Orn/Lys/Arg decarboxylase, major domain JW646_08570 PF01520 N-acetylmuramoyl-L-alanine amidase JW646_08570 PF00395 S-layer homology domain JW646_08575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_08575 PF00512 His Kinase A (phospho-acceptor) domain JW646_08575 PF00989 PAS fold JW646_08575 PF16736 Single Cache-like JW646_08585 PF00072 Response regulator receiver domain JW646_08585 PF00486 Transcriptional regulatory protein, C terminal JW646_08595 PF00885 6,7-dimethyl-8-ribityllumazine synthase JW646_08600 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JW646_08600 PF00925 GTP cyclohydrolase II JW646_08605 PF00677 Lumazine binding domain JW646_08610 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JW646_08610 PF01872 RibD C-terminal domain JW646_08615 PF02915 Rubrerythrin JW646_08620 PF00380 Ribosomal protein S9/S16 JW646_08625 PF00572 Ribosomal protein L13 JW646_08630 PF01416 tRNA pseudouridine synthase JW646_08635 PF02361 Cobalt transport protein JW646_08640 PF00005 ABC transporter JW646_08645 PF00005 ABC transporter JW646_08650 PF01196 Ribosomal protein L17 JW646_08655 PF01000 RNA polymerase Rpb3/RpoA insert domain JW646_08655 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JW646_08655 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JW646_08660 PF01479 S4 domain JW646_08660 PF00163 Ribosomal protein S4/S9 N-terminal domain JW646_08665 PF00411 Ribosomal protein S11 JW646_08670 PF00416 Ribosomal protein S13/S18 JW646_08675 PF00444 Ribosomal protein L36 JW646_08680 PF01176 Translation initiation factor 1A / IF-1 JW646_08685 PF00557 Metallopeptidase family M24 JW646_08690 PF05191 Adenylate kinase, active site lid JW646_08695 PF00344 SecY translocase JW646_08700 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JW646_08705 PF00327 Ribosomal protein L30p/L7e JW646_08710 PF03719 Ribosomal protein S5, C-terminal domain JW646_08710 PF00333 Ribosomal protein S5, N-terminal domain JW646_08715 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JW646_08720 PF00347 Ribosomal protein L6 JW646_08725 PF00410 Ribosomal protein S8 JW646_08730 PF00253 Ribosomal protein S14p/S29e JW646_08735 PF00281 Ribosomal protein L5 JW646_08735 PF00673 ribosomal L5P family C-terminus JW646_08740 PF00467 KOW motif JW646_08740 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JW646_08745 PF00238 Ribosomal protein L14p/L23e JW646_08750 PF00366 Ribosomal protein S17 JW646_08755 PF00831 Ribosomal L29 protein JW646_08760 PF00252 Ribosomal protein L16p/L10e JW646_08765 PF00189 Ribosomal protein S3, C-terminal domain JW646_08765 PF07650 KH domain JW646_08770 PF00237 Ribosomal protein L22p/L17e JW646_08775 PF00203 Ribosomal protein S19 JW646_08780 PF00181 Ribosomal Proteins L2, RNA binding domain JW646_08780 PF03947 Ribosomal Proteins L2, C-terminal domain JW646_08785 PF00276 Ribosomal protein L23 JW646_08790 PF00573 Ribosomal protein L4/L1 family JW646_08795 PF00297 Ribosomal protein L3 JW646_08800 PF00338 Ribosomal protein S10p/S20e JW646_08805 PF00009 Elongation factor Tu GTP binding domain JW646_08805 PF03143 Elongation factor Tu C-terminal domain JW646_08805 PF03144 Elongation factor Tu domain 2 JW646_08810 PF00679 Elongation factor G C-terminus JW646_08810 PF14492 Elongation Factor G, domain II JW646_08810 PF03764 Elongation factor G, domain IV JW646_08810 PF00009 Elongation factor Tu GTP binding domain JW646_08810 PF03144 Elongation factor Tu domain 2 JW646_08815 PF00177 Ribosomal protein S7p/S5e JW646_08820 PF00164 Ribosomal protein S12/S23 JW646_08825 PF04998 RNA polymerase Rpb1, domain 5 JW646_08825 PF05000 RNA polymerase Rpb1, domain 4 JW646_08825 PF00623 RNA polymerase Rpb1, domain 2 JW646_08825 PF04983 RNA polymerase Rpb1, domain 3 JW646_08825 PF04997 RNA polymerase Rpb1, domain 1 JW646_08830 PF04563 RNA polymerase beta subunit JW646_08830 PF04561 RNA polymerase Rpb2, domain 2 JW646_08830 PF04565 RNA polymerase Rpb2, domain 3 JW646_08830 PF10385 RNA polymerase beta subunit external 1 domain JW646_08830 PF00562 RNA polymerase Rpb2, domain 6 JW646_08830 PF04560 RNA polymerase Rpb2, domain 7 JW646_08835 PF00542 Ribosomal protein L7/L12 C-terminal domain JW646_08835 PF16320 Ribosomal protein L7/L12 dimerisation domain JW646_08840 PF00466 Ribosomal protein L10 JW646_08845 PF00687 Ribosomal protein L1p/L10e family JW646_08850 PF03946 Ribosomal protein L11, N-terminal domain JW646_08850 PF00298 Ribosomal protein L11, RNA binding domain JW646_08855 PF02357 Transcription termination factor nusG JW646_08855 PF00467 KOW motif JW646_08865 PF00471 Ribosomal protein L33 JW646_08870 PF00009 Elongation factor Tu GTP binding domain JW646_08870 PF03144 Elongation factor Tu domain 2 JW646_08870 PF03143 Elongation factor Tu C-terminal domain JW646_08875 PF04542 Sigma-70 region 2 JW646_08875 PF08281 Sigma-70, region 4 JW646_08880 PF05991 YacP-like NYN domain JW646_08885 PF00588 SpoU rRNA Methylase family JW646_08885 PF08032 RNA 2'-O ribose methyltransferase substrate binding JW646_08890 PF02511 Thymidylate synthase complementing protein JW646_08895 PF00636 Ribonuclease III domain JW646_08900 PF01406 tRNA synthetases class I (C) catalytic domain JW646_08900 PF09190 DALR domain JW646_08905 PF00749 tRNA synthetases class I (E and Q), catalytic domain JW646_08910 PF03129 Anticodon binding domain JW646_08910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JW646_08910 PF04073 Aminoacyl-tRNA editing domain JW646_08915 PF02542 YgbB family JW646_08920 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JW646_08930 PF02457 DisA bacterial checkpoint controller nucleotide-binding JW646_08930 PF10635 DisA bacterial checkpoint controller linker region JW646_08935 PF18073 Rubredoxin metal binding domain JW646_08940 PF10431 C-terminal, D2-small domain, of ClpB protein JW646_08940 PF02861 Clp amino terminal domain, pathogenicity island component JW646_08940 PF07724 AAA domain (Cdc48 subfamily) JW646_08940 PF00004 ATPase family associated with various cellular activities (AAA) JW646_08940 PF17871 AAA lid domain JW646_08945 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain JW646_08955 PF17727 CtsR C-terminal dimerization domain JW646_08955 PF05848 CtsR N-terminal HTH domain JW646_08960 PF00679 Elongation factor G C-terminus JW646_08960 PF14492 Elongation Factor G, domain II JW646_08960 PF03764 Elongation factor G, domain IV JW646_08960 PF00009 Elongation factor Tu GTP binding domain JW646_08960 PF03144 Elongation factor Tu domain 2 JW646_08965 PF02436 Conserved carboxylase domain JW646_08965 PF00682 HMGL-like JW646_08965 PF02785 Biotin carboxylase C-terminal domain JW646_08965 PF00364 Biotin-requiring enzyme JW646_08965 PF00289 Biotin carboxylase, N-terminal domain JW646_08965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JW646_09205 PF03960 ArsC family JW646_09210 PF04101 Glycosyltransferase family 28 C-terminal domain JW646_09210 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JW646_09220 PF02132 RecR protein JW646_09220 PF13662 Toprim domain JW646_09225 PF02575 YbaB/EbfC DNA-binding family JW646_09230 PF12169 DNA polymerase III subunits gamma and tau domain III JW646_09245 PF14437 MafB19-like deaminase JW646_09270 PF00005 ABC transporter JW646_09270 PF17912 MalK OB fold domain JW646_09270 PF03459 TOBE domain JW646_09275 PF00356 Bacterial regulatory proteins, lacI family JW646_09280 PF02446 4-alpha-glucanotransferase JW646_09285 PF00528 Binding-protein-dependent transport system inner membrane component JW646_09290 PF00528 Binding-protein-dependent transport system inner membrane component JW646_09300 PF00343 Carbohydrate phosphorylase JW646_09335 PF04542 Sigma-70 region 2 JW646_09335 PF04545 Sigma-70, region 4 JW646_09335 PF04539 Sigma-70 region 3 JW646_09340 PF13581 Histidine kinase-like ATPase domain JW646_09345 PF01740 STAS domain JW646_09360 PF03989 DNA gyrase C-terminal domain, beta-propeller JW646_09360 PF00521 DNA gyrase/topoisomerase IV, subunit A JW646_09365 PF00204 DNA gyrase B JW646_09365 PF01751 Toprim domain JW646_09365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_09365 PF00986 DNA gyrase B subunit, carboxyl terminus JW646_09370 PF02463 RecF/RecN/SMC N terminal domain JW646_09380 PF02767 DNA polymerase III beta subunit, central domain JW646_09380 PF02768 DNA polymerase III beta subunit, C-terminal domain JW646_09380 PF00712 DNA polymerase III beta subunit, N-terminal domain JW646_09385 PF00308 Bacterial dnaA protein JW646_09385 PF08299 Bacterial dnaA protein helix-turn-helix JW646_09385 PF11638 DnaA N-terminal domain JW646_09390 PF00468 Ribosomal protein L34 JW646_09395 PF00825 Ribonuclease P JW646_09400 PF01809 Putative membrane protein insertion efficiency factor JW646_09405 PF02096 60Kd inner membrane protein JW646_09410 PF14804 Jag N-terminus JW646_09410 PF01424 R3H domain JW646_09415 PF10396 GTP-binding protein TrmE N-terminus JW646_09415 PF12631 MnmE helical domain JW646_09415 PF01926 50S ribosome-binding GTPase JW646_09420 PF13932 GidA associated domain JW646_09420 PF01134 Glucose inhibited division protein A JW646_09425 PF02527 rRNA small subunit methyltransferase G JW646_09430 PF17762 HTH domain found in ParB protein JW646_09430 PF02195 ParB-like nuclease domain JW646_09435 PF13614 AAA domain JW646_09440 PF17762 HTH domain found in ParB protein JW646_09440 PF02195 ParB-like nuclease domain JW646_09450 PF06107 Bacterial protein of unknown function (DUF951) JW646_09455 PF00155 Aminotransferase class I and II JW646_09460 PF01250 Ribosomal protein S6 JW646_09465 PF00436 Single-strand binding protein family JW646_09470 PF01084 Ribosomal protein S18 JW646_09485 PF02272 DHHA1 domain JW646_09485 PF01368 DHH family JW646_09490 PF03948 Ribosomal protein L9, C-terminal domain JW646_09490 PF01281 Ribosomal protein L9, N-terminal domain JW646_09495 PF03796 DnaB-like helicase C terminal domain JW646_09495 PF00772 DnaB-like helicase N terminal domain JW646_09505 PF00709 Adenylosuccinate synthetase JW646_09525 PF00753 Metallo-beta-lactamase superfamily JW646_09530 PF02590 Predicted SPOUT methyltransferase JW646_09550 PF01171 PP-loop family JW646_09555 PF00005 ABC transporter JW646_09560 PF03649 Uncharacterised protein family (UPF0014) JW646_09585 PF08279 HTH domain JW646_09585 PF05043 Mga helix-turn-helix domain JW646_09585 PF00874 PRD domain JW646_09585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JW646_09590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JW646_09600 PF03611 PTS system sugar-specific permease component JW646_09605 PF00456 Transketolase, thiamine diphosphate binding domain JW646_09610 PF02779 Transketolase, pyrimidine binding domain JW646_09610 PF02780 Transketolase, C-terminal domain JW646_09615 PF00923 Transaldolase/Fructose-6-phosphate aldolase JW646_09620 PF03831 PhnA domain JW646_09620 PF08274 PhnA Zinc-Ribbon JW646_09635 PF01266 FAD dependent oxidoreductase JW646_09650 PF02664 S-Ribosylhomocysteinase (LuxS) JW646_09660 PF02310 B12 binding domain JW646_09660 PF02607 B12 binding domain JW646_09660 PF02965 Vitamin B12 dependent methionine synthase, activation domain JW646_09660 PF00809 Pterin binding enzyme JW646_09660 PF02574 Homocysteine S-methyltransferase JW646_09665 PF02073 Thermophilic metalloprotease (M29) JW646_09675 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JW646_09680 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JW646_09680 PF00117 Glutamine amidotransferase class-I JW646_09685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JW646_09685 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JW646_09685 PF02142 MGS-like domain JW646_09695 PF10672 S-adenosylmethionine-dependent methyltransferase JW646_09695 PF02926 THUMP domain JW646_09695 PF01170 Putative RNA methylase family UPF0020 JW646_09700 PF00849 RNA pseudouridylate synthase JW646_09700 PF01479 S4 domain JW646_09710 PF07516 SecA Wing and Scaffold domain JW646_09710 PF01043 SecA preprotein cross-linking domain JW646_09710 PF02810 SEC-C motif JW646_09710 PF07517 SecA DEAD-like domain JW646_09725 PF05582 YabG peptidase U57 JW646_09730 PF06257 Biofilm formation stimulator VEG JW646_09740 PF08544 GHMP kinases C terminal JW646_09740 PF00288 GHMP kinases N terminal domain JW646_09745 PF07729 FCD domain JW646_09745 PF00392 Bacterial regulatory proteins, gntR family JW646_09750 PF09551 Stage II sporulation protein R (spore_II_R) JW646_09755 PF07486 Cell Wall Hydrolase JW646_09755 PF01471 Putative peptidoglycan binding domain JW646_09765 PF11734 TilS substrate C-terminal domain JW646_09765 PF01171 PP-loop family JW646_09770 PF00004 ATPase family associated with various cellular activities (AAA) JW646_09770 PF17862 AAA+ lid domain JW646_09770 PF01434 Peptidase family M41 JW646_09775 PF03099 Biotin/lipoate A/B protein ligase family JW646_09775 PF08279 HTH domain JW646_09775 PF02237 Biotin protein ligase C terminal domain JW646_09780 PF03576 Peptidase family S58 JW646_09790 PF03309 Type III pantothenate kinase JW646_09795 PF01207 Dihydrouridine synthase (Dus) JW646_09800 PF03449 Transcription elongation factor, N-terminal JW646_09800 PF01272 Transcription elongation factor, GreA/GreB, C-term JW646_09805 PF01336 OB-fold nucleic acid binding domain JW646_09805 PF00152 tRNA synthetases class II (D, K and N) JW646_09835 PF00155 Aminotransferase class I and II JW646_09840 PF03477 ATP cone domain JW646_09840 PF13597 Anaerobic ribonucleoside-triphosphate reductase JW646_10015 PF02457 DisA bacterial checkpoint controller nucleotide-binding JW646_10025 PF01515 Phosphate acetyl/butaryl transferase JW646_10030 PF00871 Acetokinase family JW646_10045 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JW646_10045 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JW646_10060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JW646_10060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JW646_10060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JW646_10060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JW646_10065 PF01380 SIS domain JW646_10075 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JW646_10080 PF08486 Stage II sporulation protein JW646_10090 PF12116 Stage III sporulation protein D JW646_10100 PF06866 Protein of unknown function (DUF1256) JW646_10105 PF02773 S-adenosylmethionine synthetase, C-terminal domain JW646_10105 PF02772 S-adenosylmethionine synthetase, central domain JW646_10105 PF00438 S-adenosylmethionine synthetase, N-terminal domain JW646_10110 PF13538 UvrD-like helicase C-terminal domain JW646_10110 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JW646_10110 PF14490 Helix-hairpin-helix containing domain JW646_10115 PF00156 Phosphoribosyl transferase domain JW646_10120 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JW646_10120 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JW646_10125 PF02646 RmuC family JW646_10130 PF07517 SecA DEAD-like domain JW646_10130 PF01043 SecA preprotein cross-linking domain JW646_10130 PF07516 SecA Wing and Scaffold domain JW646_10130 PF02810 SEC-C motif JW646_10140 PF17674 HHH domain JW646_10140 PF09371 Tex-like protein N-terminal domain JW646_10140 PF16921 Tex protein YqgF-like domain JW646_10140 PF00575 S1 RNA binding domain JW646_10145 PF01979 Amidohydrolase family JW646_10150 PF12822 ECF transporter, substrate-specific component JW646_10155 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JW646_10160 PF00814 Glycoprotease family JW646_10165 PF00583 Acetyltransferase (GNAT) family JW646_10170 PF00814 Glycoprotease family JW646_10180 PF16326 ABC transporter C-terminal domain JW646_10180 PF00005 ABC transporter JW646_10180 PF12848 ABC transporter JW646_10185 PF02629 CoA binding domain JW646_10185 PF06971 Putative DNA-binding protein N-terminus JW646_10190 PF12838 4Fe-4S dicluster domain JW646_10195 PF00037 4Fe-4S binding domain JW646_10200 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JW646_10200 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JW646_10205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JW646_10205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JW646_10210 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JW646_10215 PF01180 Dihydroorotate dehydrogenase JW646_10220 PF00156 Phosphoribosyl transferase domain JW646_10230 PF13091 PLD-like domain JW646_10230 PF13396 Phospholipase_D-nuclease N-terminal JW646_10240 PF01757 Acyltransferase family JW646_10245 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JW646_10250 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JW646_10255 PF16363 GDP-mannose 4,6 dehydratase JW646_10260 PF04991 LicD family JW646_10270 PF00005 ABC transporter JW646_10270 PF14524 Wzt C-terminal domain JW646_10275 PF00166 Chaperonin 10 Kd subunit JW646_10280 PF00118 TCP-1/cpn60 chaperonin family JW646_10285 PF00731 AIR carboxylase JW646_10290 PF00571 CBS domain JW646_10290 PF00478 IMP dehydrogenase / GMP reductase domain JW646_10295 PF00958 GMP synthase C terminal domain JW646_10295 PF00117 Glutamine amidotransferase class-I JW646_10295 PF02540 NAD synthase JW646_10300 PF02608 ABC transporter substrate-binding protein PnrA-like JW646_10305 PF00860 Permease family JW646_10315 PF00731 AIR carboxylase JW646_10320 PF01259 SAICAR synthetase JW646_10325 PF00156 Phosphoribosyl transferase domain JW646_10330 PF00586 AIR synthase related protein, N-terminal domain JW646_10330 PF02769 AIR synthase related protein, C-terminal domain JW646_10335 PF00551 Formyl transferase JW646_10340 PF01808 AICARFT/IMPCHase bienzyme JW646_10340 PF02142 MGS-like domain JW646_10345 PF02843 Phosphoribosylglycinamide synthetase, C domain JW646_10345 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JW646_10345 PF02844 Phosphoribosylglycinamide synthetase, N domain JW646_10350 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JW646_10350 PF02769 AIR synthase related protein, C-terminal domain JW646_10350 PF00586 AIR synthase related protein, N-terminal domain JW646_10365 PF08281 Sigma-70, region 4 JW646_10365 PF04542 Sigma-70 region 2 JW646_10375 PF00005 ABC transporter JW646_10375 PF13732 Domain of unknown function (DUF4162) JW646_10390 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JW646_10390 PF13375 RnfC Barrel sandwich hybrid domain JW646_10390 PF10531 SLBB domain JW646_10390 PF13237 4Fe-4S dicluster domain JW646_10395 PF09338 Glycine/sarcosine/betaine reductase component B subunits JW646_10405 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) JW646_10410 PF09338 Glycine/sarcosine/betaine reductase component B subunits JW646_10415 PF00011 Hsp20/alpha crystallin family JW646_10420 PF00183 Hsp90 protein JW646_10425 PF08359 YsiA-like protein, C-terminal region JW646_10425 PF00440 Bacterial regulatory proteins, tetR family JW646_10430 PF00873 AcrB/AcrD/AcrF family JW646_10490 PF01022 Bacterial regulatory protein, arsR family JW646_10495 PF00403 Heavy-metal-associated domain JW646_10550 PF17757 UvrB interaction domain JW646_10550 PF12344 Ultra-violet resistance protein B JW646_10550 PF02151 UvrB/uvrC motif JW646_10550 PF04851 Type III restriction enzyme, res subunit JW646_10550 PF00271 Helicase conserved C-terminal domain JW646_10555 PF17760 UvrA interaction domain JW646_10555 PF17755 UvrA DNA-binding domain JW646_10560 PF01541 GIY-YIG catalytic domain JW646_10560 PF08459 UvrC Helix-hairpin-helix N-terminal JW646_10560 PF02151 UvrB/uvrC motif JW646_10560 PF12826 Helix-hairpin-helix motif JW646_10565 PF02603 HPr Serine kinase N terminus JW646_10565 PF07475 HPr Serine kinase C-terminal domain JW646_10570 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JW646_10570 PF00037 4Fe-4S binding domain JW646_10570 PF02256 Iron hydrogenase small subunit JW646_10570 PF02906 Iron only hydrogenase large subunit, C-terminal domain JW646_10575 PF00037 4Fe-4S binding domain JW646_10575 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JW646_10575 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JW646_10585 PF01116 Fructose-bisphosphate aldolase class-II JW646_10590 PF01479 S4 domain JW646_10590 PF00849 RNA pseudouridylate synthase JW646_10595 PF05958 tRNA (Uracil-5-)-methyltransferase JW646_10600 PF00561 alpha/beta hydrolase fold JW646_10620 PF01022 Bacterial regulatory protein, arsR family JW646_10645 PF13367 PrsW family intramembrane metalloprotease JW646_10650 PF10502 Signal peptidase, peptidase S26 JW646_10655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JW646_10655 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JW646_10655 PF03129 Anticodon binding domain JW646_10655 PF02824 TGS domain JW646_10665 PF00248 Aldo/keto reductase family JW646_10670 PF04960 Glutaminase JW646_10680 PF08331 Domain of unknown function (DUF1730) JW646_10685 PF13654 AAA domain JW646_10685 PF05362 Lon protease (S16) C-terminal proteolytic domain JW646_10690 PF10576 Iron-sulfur binding domain of endonuclease III JW646_10690 PF00633 Helix-hairpin-helix motif JW646_10690 PF00730 HhH-GPD superfamily base excision DNA repair protein JW646_10695 PF04294 VanW like protein JW646_10700 PF00588 SpoU rRNA Methylase family JW646_10705 PF02645 Uncharacterised protein, DegV family COG1307 JW646_10710 PF02608 ABC transporter substrate-binding protein PnrA-like JW646_10715 PF00005 ABC transporter JW646_10720 PF02653 Branched-chain amino acid transport system / permease component JW646_10725 PF02653 Branched-chain amino acid transport system / permease component JW646_10735 PF03129 Anticodon binding domain JW646_10735 PF02824 TGS domain JW646_10735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JW646_10735 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JW646_10740 PF00004 ATPase family associated with various cellular activities (AAA) JW646_10740 PF17862 AAA+ lid domain JW646_10740 PF01434 Peptidase family M41 JW646_10745 PF05198 Translation initiation factor IF-3, N-terminal domain JW646_10745 PF00707 Translation initiation factor IF-3, C-terminal domain JW646_10750 PF01632 Ribosomal protein L35 JW646_10755 PF00453 Ribosomal protein L20 JW646_10760 PF02386 Cation transport protein JW646_10765 PF02254 TrkA-N domain JW646_10765 PF02080 TrkA-C domain JW646_10770 PF00588 SpoU rRNA Methylase family JW646_10770 PF08032 RNA 2'-O ribose methyltransferase substrate binding JW646_10775 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JW646_10775 PF01409 tRNA synthetases class II core domain (F) JW646_10780 PF03484 tRNA synthetase B5 domain JW646_10780 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JW646_10780 PF01588 Putative tRNA binding domain JW646_10780 PF03147 Ferredoxin-fold anticodon binding domain JW646_10780 PF03483 B3/4 domain JW646_10790 PF16325 Peptidase family U32 C-terminal domain JW646_10790 PF01136 Peptidase family U32 JW646_10795 PF07687 Peptidase dimerisation domain JW646_10795 PF01546 Peptidase family M20/M25/M40 JW646_10800 PF01713 Smr domain JW646_10800 PF00488 MutS domain V JW646_10805 PF04463 Protein of unknown function (DUF523) JW646_10810 PF05746 DALR anticodon binding domain JW646_10810 PF00750 tRNA synthetases class I (R) JW646_10810 PF03485 Arginyl tRNA synthetase N terminal domain JW646_10825 PF01938 TRAM domain JW646_10825 PF00919 Uncharacterized protein family UPF0004 JW646_10825 PF04055 Radical SAM superfamily JW646_10835 PF03063 Prismane/CO dehydrogenase family JW646_10840 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JW646_10845 PF01268 Formate--tetrahydrofolate ligase JW646_10850 PF04961 Formiminotransferase-cyclodeaminase JW646_10855 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JW646_10855 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JW646_10865 PF02219 Methylenetetrahydrofolate reductase JW646_10865 PF02574 Homocysteine S-methyltransferase JW646_10870 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_10870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JW646_10880 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit JW646_10885 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit JW646_10885 PF04060 Putative Fe-S cluster JW646_10890 PF00809 Pterin binding enzyme JW646_10890 PF02574 Homocysteine S-methyltransferase JW646_10895 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit JW646_10895 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain JW646_10900 PF01597 Glycine cleavage H-protein JW646_10915 PF01032 FecCD transport family JW646_10920 PF00005 ABC transporter JW646_10945 PF00999 Sodium/hydrogen exchanger family JW646_10950 PF00654 Voltage gated chloride channel JW646_10965 PF00580 UvrD/REP helicase N-terminal domain JW646_10965 PF13361 UvrD-like helicase C-terminal domain JW646_10970 PF00497 Bacterial extracellular solute-binding proteins, family 3 JW646_10975 PF00528 Binding-protein-dependent transport system inner membrane component JW646_10980 PF00005 ABC transporter JW646_10985 PF17763 Glutaminase/Asparaginase C-terminal domain JW646_10985 PF00710 Asparaginase, N-terminal JW646_10990 PF00266 Aminotransferase class-V JW646_10995 PF02926 THUMP domain JW646_10995 PF02568 Thiamine biosynthesis protein (ThiI) JW646_11000 PF04055 Radical SAM superfamily JW646_11005 PF01228 Glycine radical JW646_11005 PF02901 Pyruvate formate lyase-like JW646_11010 PF01699 Sodium/calcium exchanger protein JW646_11015 PF00271 Helicase conserved C-terminal domain JW646_11015 PF00270 DEAD/DEAH box helicase JW646_11020 PF12822 ECF transporter, substrate-specific component JW646_11025 PF01740 STAS domain JW646_11030 PF13581 Histidine kinase-like ATPase domain JW646_11035 PF04542 Sigma-70 region 2 JW646_11035 PF04545 Sigma-70, region 4 JW646_11035 PF04539 Sigma-70 region 3 JW646_11040 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JW646_11045 PF07451 Stage V sporulation protein AD (SpoVAD) JW646_11055 PF00912 Transglycosylase JW646_11055 PF00905 Penicillin binding protein transpeptidase domain JW646_11060 PF05580 SpoIVB peptidase S55 JW646_11060 PF17820 PDZ domain JW646_11070 PF01520 N-acetylmuramoyl-L-alanine amidase JW646_11070 PF08239 Bacterial SH3 domain JW646_11080 PF00005 ABC transporter JW646_11080 PF12848 ABC transporter JW646_11100 PF16360 GTP-binding GTPase Middle Region JW646_11100 PF01926 50S ribosome-binding GTPase JW646_11100 PF13167 GTP-binding GTPase N-terminal JW646_11115 PF01205 Uncharacterized protein family UPF0029 JW646_11115 PF09186 Domain of unknown function (DUF1949) JW646_11125 PF01925 Sulfite exporter TauE/SafE JW646_11130 PF01925 Sulfite exporter TauE/SafE JW646_11135 PF02540 NAD synthase JW646_11140 PF01709 Transcriptional regulator JW646_11180 PF02075 Crossover junction endodeoxyribonuclease RuvC JW646_11185 PF07499 RuvA, C-terminal domain JW646_11185 PF01330 RuvA N terminal domain JW646_11190 PF05491 RuvB C-terminal winged helix domain JW646_11190 PF17864 RuvB AAA lid domain JW646_11190 PF05496 Holliday junction DNA helicase RuvB P-loop domain JW646_11195 PF02547 Queuosine biosynthesis protein JW646_11205 PF01702 Queuine tRNA-ribosyltransferase JW646_11210 PF02699 Preprotein translocase subunit JW646_11230 PF00132 Bacterial transferase hexapeptide (six repeats) JW646_11235 PF01368 DHH family JW646_11235 PF02272 DHHA1 domain JW646_11235 PF17768 RecJ OB domain JW646_11235 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JW646_11240 PF00156 Phosphoribosyl transferase domain JW646_11245 PF13291 ACT domain JW646_11245 PF04607 Region found in RelA / SpoT proteins JW646_11245 PF02824 TGS domain JW646_11250 PF02580 D-Tyr-tRNA(Tyr) deacylase JW646_11255 PF00753 Metallo-beta-lactamase superfamily JW646_11260 PF04055 Radical SAM superfamily JW646_11265 PF13393 Histidyl-tRNA synthetase JW646_11265 PF03129 Anticodon binding domain JW646_11270 PF02938 GAD domain JW646_11270 PF01336 OB-fold nucleic acid binding domain JW646_11270 PF00152 tRNA synthetases class II (D, K and N) JW646_11275 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JW646_11275 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JW646_11280 PF01261 Xylose isomerase-like TIM barrel JW646_11310 PF03477 ATP cone domain JW646_11310 PF13597 Anaerobic ribonucleoside-triphosphate reductase JW646_11315 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JW646_11315 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JW646_11320 PF02511 Thymidylate synthase complementing protein JW646_11345 PF13091 PLD-like domain JW646_11355 PF00269 Small, acid-soluble spore proteins, alpha/beta type JW646_11375 PF01966 HD domain JW646_11385 PF00367 phosphotransferase system, EIIB JW646_11385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JW646_11385 PF02378 Phosphotransferase system, EIIC JW646_11390 PF01268 Formate--tetrahydrofolate ligase JW646_11395 PF04012 PspA/IM30 family JW646_11405 PF13421 SPFH domain-Band 7 family JW646_11425 PF13291 ACT domain JW646_11425 PF00291 Pyridoxal-phosphate dependent enzyme JW646_11435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JW646_11435 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_11450 PF00005 ABC transporter JW646_11450 PF00664 ABC transporter transmembrane region JW646_11455 PF00664 ABC transporter transmembrane region JW646_11455 PF00005 ABC transporter JW646_11460 PF00248 Aldo/keto reductase family JW646_11465 PF04542 Sigma-70 region 2 JW646_11470 PF07691 PA14 domain JW646_11470 PF12791 Anti-sigma factor N-terminus JW646_11475 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JW646_11485 PF00270 DEAD/DEAH box helicase JW646_11485 PF00271 Helicase conserved C-terminal domain JW646_11505 PF00793 DAHP synthetase I family JW646_11505 PF18152 DAHP synthase ferredoxin-like domain JW646_11510 PF13419 Haloacid dehalogenase-like hydrolase JW646_11515 PF16656 Purple acid Phosphatase, N-terminal domain JW646_11515 PF00149 Calcineurin-like phosphoesterase JW646_11520 PF01106 NifU-like domain JW646_11525 PF01061 ABC-2 type transporter JW646_11530 PF01256 Carbohydrate kinase JW646_11530 PF03853 YjeF-related protein N-terminus JW646_11545 PF01145 SPFH domain / Band 7 family JW646_11550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JW646_11550 PF00128 Alpha amylase, catalytic domain JW646_11550 PF02806 Alpha amylase, C-terminal all-beta domain JW646_11555 PF00483 Nucleotidyl transferase JW646_11560 PF00483 Nucleotidyl transferase JW646_11565 PF08323 Starch synthase catalytic domain JW646_11565 PF00534 Glycosyl transferases group 1 JW646_11570 PF00343 Carbohydrate phosphorylase JW646_11575 PF00128 Alpha amylase, catalytic domain JW646_11575 PF02903 Alpha amylase, N-terminal ig-like domain JW646_11575 PF00395 S-layer homology domain JW646_11580 PF00436 Single-strand binding protein family JW646_11585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_11585 PF18698 Histidine kinase sensor domain JW646_11585 PF00512 His Kinase A (phospho-acceptor) domain JW646_11585 PF00989 PAS fold JW646_11585 PF00672 HAMP domain JW646_11595 PF10609 NUBPL iron-transfer P-loop NTPase JW646_11615 PF00871 Acetokinase family JW646_11620 PF13411 MerR HTH family regulatory protein JW646_11620 PF06445 GyrI-like small molecule binding domain JW646_11625 PF01515 Phosphate acetyl/butaryl transferase JW646_11635 PF01177 Asp/Glu/Hydantoin racemase JW646_11640 PF00672 HAMP domain JW646_11640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_11640 PF00512 His Kinase A (phospho-acceptor) domain JW646_11645 PF00072 Response regulator receiver domain JW646_11645 PF00486 Transcriptional regulatory protein, C terminal JW646_11655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_11655 PF00512 His Kinase A (phospho-acceptor) domain JW646_11655 PF00672 HAMP domain JW646_11660 PF00072 Response regulator receiver domain JW646_11660 PF00486 Transcriptional regulatory protein, C terminal JW646_11680 PF07687 Peptidase dimerisation domain JW646_11680 PF01546 Peptidase family M20/M25/M40 JW646_11695 PF00291 Pyridoxal-phosphate dependent enzyme JW646_11710 PF01554 MatE JW646_11720 PF07687 Peptidase dimerisation domain JW646_11720 PF01546 Peptidase family M20/M25/M40 JW646_11730 PF00753 Metallo-beta-lactamase superfamily JW646_11730 PF17770 Ribonuclease J C-terminal domain JW646_11730 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JW646_11740 PF08903 Domain of unknown function (DUF1846) JW646_11745 PF00817 impB/mucB/samB family JW646_11745 PF11799 impB/mucB/samB family C-terminal domain JW646_11745 PF11798 IMS family HHH motif JW646_11750 PF01545 Cation efflux family JW646_11790 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component JW646_11795 PF01869 BadF/BadG/BcrA/BcrD ATPase family JW646_11820 PF12683 Protein of unknown function (DUF3798) JW646_11825 PF00005 ABC transporter JW646_11840 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component JW646_11855 PF00580 UvrD/REP helicase N-terminal domain JW646_11855 PF13361 UvrD-like helicase C-terminal domain JW646_11865 PF12705 PD-(D/E)XK nuclease superfamily JW646_11870 PF13361 UvrD-like helicase C-terminal domain JW646_11870 PF00580 UvrD/REP helicase N-terminal domain JW646_11870 PF12705 PD-(D/E)XK nuclease superfamily JW646_11875 PF00149 Calcineurin-like phosphoesterase JW646_11875 PF12320 Type 5 capsule protein repressor C-terminal domain JW646_11880 PF13175 AAA ATPase domain JW646_11885 PF03471 Transporter associated domain JW646_11885 PF00571 CBS domain JW646_11885 PF01595 Cyclin M transmembrane N-terminal domain JW646_11890 PF01594 AI-2E family transporter JW646_11895 PF12850 Calcineurin-like phosphoesterase superfamily domain JW646_11900 PF01513 ATP-NAD kinase JW646_11905 PF04073 Aminoacyl-tRNA editing domain JW646_11910 PF00849 RNA pseudouridylate synthase JW646_11920 PF01497 Periplasmic binding protein JW646_11925 PF01032 FecCD transport family JW646_11930 PF00005 ABC transporter JW646_11935 PF01497 Periplasmic binding protein JW646_11940 PF01032 FecCD transport family JW646_11945 PF00005 ABC transporter JW646_11950 PF00550 Phosphopantetheine attachment site JW646_11975 PF03062 MBOAT, membrane-bound O-acyltransferase family JW646_12005 PF02719 Polysaccharide biosynthesis protein JW646_12010 PF12464 Maltose acetyltransferase JW646_12010 PF00132 Bacterial transferase hexapeptide (six repeats) JW646_12015 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JW646_12020 PF00551 Formyl transferase JW646_12020 PF02911 Formyl transferase, C-terminal domain JW646_12030 PF02348 Cytidylyltransferase JW646_12045 PF08666 SAF domain JW646_12045 PF03102 NeuB family JW646_12055 PF00535 Glycosyl transferase family 2 JW646_12080 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JW646_12080 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JW646_12080 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JW646_12110 PF01053 Cys/Met metabolism PLP-dependent enzyme JW646_12115 PF00005 ABC transporter JW646_12120 PF02687 FtsX-like permease family JW646_12120 PF12704 MacB-like periplasmic core domain JW646_12125 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JW646_12125 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_12130 PF06725 3D domain JW646_12130 PF01476 LysM domain JW646_12135 PF00072 Response regulator receiver domain JW646_12135 PF00486 Transcriptional regulatory protein, C terminal JW646_12140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_12145 PF00005 ABC transporter JW646_12155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JW646_12160 PF00528 Binding-protein-dependent transport system inner membrane component JW646_12165 PF12911 N-terminal TM domain of oligopeptide transport permease C JW646_12165 PF00528 Binding-protein-dependent transport system inner membrane component JW646_12170 PF00005 ABC transporter JW646_12170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JW646_12175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JW646_12175 PF00005 ABC transporter JW646_12185 PF00005 ABC transporter JW646_12190 PF09084 NMT1/THI5 like JW646_12195 PF00528 Binding-protein-dependent transport system inner membrane component JW646_12205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JW646_12205 PF03466 LysR substrate binding domain JW646_12215 PF02803 Thiolase, C-terminal domain JW646_12215 PF00108 Thiolase, N-terminal domain JW646_12220 PF01144 Coenzyme A transferase JW646_12225 PF07690 Major Facilitator Superfamily JW646_12230 PF01575 MaoC like domain JW646_12235 PF12241 Trans-2-enoyl-CoA reductase catalytic region JW646_12235 PF07055 Enoyl reductase FAD binding domain JW646_12235 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JW646_12245 PF01497 Periplasmic binding protein JW646_12250 PF01032 FecCD transport family JW646_12255 PF00005 ABC transporter JW646_12275 PF00356 Bacterial regulatory proteins, lacI family JW646_12280 PF07690 Major Facilitator Superfamily JW646_12285 PF00474 Sodium:solute symporter family JW646_12300 PF00484 Carbonic anhydrase JW646_12335 PF00266 Aminotransferase class-V JW646_12350 PF17854 FtsK alpha domain JW646_12350 PF09397 Ftsk gamma domain JW646_12350 PF01580 FtsK/SpoIIIE family JW646_12395 PF01047 MarR family JW646_12410 PF00293 NUDIX domain JW646_12420 PF00528 Binding-protein-dependent transport system inner membrane component JW646_12425 PF12857 TOBE-like domain JW646_12425 PF17850 CysA C-terminal regulatory domain JW646_12425 PF00005 ABC transporter JW646_12445 PF01230 HIT domain JW646_12450 PF04542 Sigma-70 region 2 JW646_12450 PF08281 Sigma-70, region 4 JW646_12460 PF01522 Polysaccharide deacetylase JW646_12480 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JW646_12480 PF00056 lactate/malate dehydrogenase, NAD binding domain JW646_12490 PF01263 Aldose 1-epimerase JW646_12495 PF13407 Periplasmic binding protein domain JW646_12500 PF00005 ABC transporter JW646_12505 PF02653 Branched-chain amino acid transport system / permease component JW646_12510 PF00480 ROK family JW646_12515 PF01261 Xylose isomerase-like TIM barrel JW646_12520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JW646_12520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JW646_12525 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JW646_12525 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JW646_12535 PF13411 MerR HTH family regulatory protein JW646_12545 PF01969 Protein of unknown function DUF111 JW646_12555 PF03551 Transcriptional regulator PadR-like family JW646_12570 PF00356 Bacterial regulatory proteins, lacI family JW646_12575 PF00221 Aromatic amino acid lyase JW646_12580 PF17392 Urocanase C-terminal domain JW646_12580 PF17391 Urocanase N-terminal domain JW646_12580 PF01175 Urocanase Rossmann-like domain JW646_12585 PF07837 Formiminotransferase domain, N-terminal subdomain JW646_12585 PF02971 Formiminotransferase domain JW646_12590 PF01979 Amidohydrolase family JW646_12605 PF02632 BioY family JW646_12640 PF14667 Polysaccharide biosynthesis C-terminal domain JW646_12640 PF01943 Polysaccharide biosynthesis protein JW646_12645 PF02811 PHP domain JW646_12650 PF00392 Bacterial regulatory proteins, gntR family JW646_12650 PF00155 Aminotransferase class I and II JW646_12655 PF05979 Bacterial protein of unknown function (DUF896) JW646_12660 PF02127 Aminopeptidase I zinc metalloprotease (M18) JW646_12675 PF12146 Serine aminopeptidase, S33 JW646_12680 PF01680 SOR/SNZ family JW646_12685 PF02743 Cache domain JW646_12685 PF00672 HAMP domain JW646_12685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JW646_12700 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JW646_12700 PF01367 5'-3' exonuclease, C-terminal SAM fold JW646_12700 PF00476 DNA polymerase family A JW646_12705 PF01121 Dephospho-CoA kinase JW646_12720 PF01063 Amino-transferase class IV JW646_12730 PF00072 Response regulator receiver domain JW646_12730 PF04397 LytTr DNA-binding domain JW646_12740 PF10086 YhfC intramembrane metalloprotease JW646_12760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JW646_12765 PF01476 LysM domain JW646_12765 PF00877 NlpC/P60 family JW646_12765 PF08239 Bacterial SH3 domain JW646_12775 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JW646_12775 PF13237 4Fe-4S dicluster domain JW646_12775 PF13375 RnfC Barrel sandwich hybrid domain JW646_12775 PF10531 SLBB domain JW646_12780 PF03116 NQR2, RnfD, RnfE family JW646_12785 PF04205 FMN-binding domain JW646_12790 PF02508 Rnf-Nqr subunit, membrane protein JW646_12795 PF02508 Rnf-Nqr subunit, membrane protein JW646_12800 PF04060 Putative Fe-S cluster JW646_12800 PF13187 4Fe-4S dicluster domain JW646_12800 PF00037 4Fe-4S binding domain JW646_12805 PF02545 Maf-like protein JW646_12810 PF04002 RadC-like JAB domain JW646_12830 PF00905 Penicillin binding protein transpeptidase domain JW646_12830 PF03717 Penicillin-binding Protein dimerisation domain JW646_12835 PF03775 Septum formation inhibitor MinC, C-terminal domain JW646_12840 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JW646_12845 PF03776 Septum formation topological specificity factor MinE JW646_12850 PF01098 Cell cycle protein JW646_12855 PF02142 MGS-like domain JW646_12860 PF00753 Metallo-beta-lactamase superfamily JW646_12860 PF00258 Flavodoxin JW646_12875 PF00575 S1 RNA binding domain JW646_12875 PF10150 Ribonuclease E/G family JW646_12880 PF00829 Ribosomal prokaryotic L21 protein JW646_12890 PF01016 Ribosomal L27 protein JW646_12895 PF09269 Domain of unknown function (DUF1967) JW646_12895 PF01926 50S ribosome-binding GTPase JW646_12895 PF01018 GTP1/OBG JW646_12905 PF13416 Bacterial extracellular solute-binding protein JW646_12915 PF13443 Cro/C1-type HTH DNA-binding domain JW646_12925 PF00753 Metallo-beta-lactamase superfamily JW646_12930 PF02631 RecX family JW646_12935 PF01467 Cytidylyltransferase-like JW646_12940 PF01966 HD domain JW646_12950 PF09334 tRNA synthetases class I (M) JW646_12950 PF13603 Leucyl-tRNA synthetase, Domain 2 JW646_12950 PF00133 tRNA synthetases class I (I, L, M and V) JW646_12950 PF08264 Anticodon-binding domain of tRNA JW646_12955 PF01042 Endoribonuclease L-PSP JW646_12960 PF03471 Transporter associated domain JW646_12960 PF00999 Sodium/hydrogen exchanger family JW646_12960 PF02080 TrkA-C domain JW646_12970 PF00206 Lyase JW646_12970 PF14698 Argininosuccinate lyase C-terminal JW646_12975 PF00768 D-alanyl-D-alanine carboxypeptidase JW646_12975 PF07943 Penicillin-binding protein 5, C-terminal domain JW646_12980 PF10531 SLBB domain JW646_12985 PF02424 ApbE family JW646_12995 PF03167 Uracil DNA glycosylase superfamily JW646_13010 PF01276 Orn/Lys/Arg decarboxylase, major domain JW646_13010 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JW646_13015 PF02675 S-adenosylmethionine decarboxylase JW646_13020 PF17284 Spermidine synthase tetramerisation domain JW646_13025 PF00491 Arginase family JW646_13030 PF00438 S-adenosylmethionine synthetase, N-terminal domain JW646_13030 PF02773 S-adenosylmethionine synthetase, C-terminal domain JW646_13030 PF02772 S-adenosylmethionine synthetase, central domain JW646_13035 PF00899 ThiF family JW646_13040 PF03772 Competence protein JW646_13040 PF00753 Metallo-beta-lactamase superfamily JW646_13040 PF13567 Domain of unknown function (DUF4131) JW646_13055 PF03772 Competence protein JW646_13055 PF13567 Domain of unknown function (DUF4131) JW646_13055 PF00753 Metallo-beta-lactamase superfamily JW646_13060 PF06144 DNA polymerase III, delta subunit JW646_13065 PF01649 Ribosomal protein S20 JW646_13070 PF03418 Germination protease JW646_13085 PF03144 Elongation factor Tu domain 2 JW646_13085 PF00009 Elongation factor Tu GTP binding domain JW646_13085 PF00679 Elongation factor G C-terminus JW646_13085 PF06421 GTP-binding protein LepA C-terminus JW646_13090 PF08245 Mur ligase middle domain JW646_13095 PF14102 Capsule biosynthesis CapC JW646_13100 PF09587 Bacterial capsule synthesis protein PGA_cap JW646_13110 PF06969 HemN C-terminal domain JW646_13110 PF04055 Radical SAM superfamily JW646_13115 PF01628 HrcA protein C terminal domain JW646_13120 PF01025 GrpE JW646_13125 PF00012 Hsp70 protein JW646_13130 PF00226 DnaJ domain JW646_13130 PF01556 DnaJ C terminal domain JW646_13130 PF00684 DnaJ central domain JW646_13140 PF04452 RNA methyltransferase JW646_13145 PF04055 Radical SAM superfamily JW646_13145 PF01938 TRAM domain JW646_13145 PF00919 Uncharacterized protein family UPF0004 JW646_13150 PF01230 HIT domain JW646_13155 PF01165 Ribosomal protein S21 JW646_13160 PF09424 Yqey-like protein JW646_13165 PF03073 TspO/MBR family JW646_13180 PF02562 PhoH-like protein JW646_13185 PF02130 Uncharacterized protein family UPF0054 JW646_13190 PF01219 Prokaryotic diacylglycerol kinase JW646_13195 PF07650 KH domain JW646_13195 PF01926 50S ribosome-binding GTPase JW646_13200 PF01769 Divalent cation transporter JW646_13200 PF03448 MgtE intracellular N domain JW646_13200 PF00571 CBS domain JW646_13205 PF02565 Recombination protein O C terminal JW646_13205 PF11967 Recombination protein O N terminal JW646_13215 PF02091 Glycyl-tRNA synthetase alpha subunit JW646_13220 PF05746 DALR anticodon binding domain JW646_13220 PF02092 Glycyl-tRNA synthetase beta subunit JW646_13225 PF08279 HTH domain JW646_13225 PF00571 CBS domain JW646_13230 PF03618 Kinase/pyrophosphorylase JW646_13235 PF02896 PEP-utilising enzyme, TIM barrel domain JW646_13235 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JW646_13235 PF00391 PEP-utilising enzyme, mobile domain JW646_13240 PF00072 Response regulator receiver domain JW646_13240 PF00486 Transcriptional regulatory protein, C terminal JW646_13245 PF13493 Domain of unknown function (DUF4118) JW646_13245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_13245 PF00512 His Kinase A (phospho-acceptor) domain JW646_13245 PF02702 Osmosensitive K+ channel His kinase sensor domain JW646_13250 PF02669 K+-transporting ATPase, c chain JW646_13260 PF03814 Potassium-transporting ATPase A subunit JW646_13265 PF01321 Creatinase/Prolidase N-terminal domain JW646_13265 PF00557 Metallopeptidase family M24 JW646_13270 PF01321 Creatinase/Prolidase N-terminal domain JW646_13270 PF00557 Metallopeptidase family M24 JW646_13275 PF00854 POT family JW646_13280 PF07687 Peptidase dimerisation domain JW646_13280 PF01546 Peptidase family M20/M25/M40 JW646_13285 PF01751 Toprim domain JW646_13285 PF01131 DNA topoisomerase JW646_13290 PF00692 dUTPase JW646_13295 PF01520 N-acetylmuramoyl-L-alanine amidase JW646_13295 PF08239 Bacterial SH3 domain JW646_13300 PF00877 NlpC/P60 family JW646_13305 PF07669 Eco57I restriction-modification methylase JW646_13305 PF12950 TaqI-like C-terminal specificity domain JW646_13320 PF00381 PTS HPr component phosphorylation site JW646_13325 PF05524 PEP-utilising enzyme, N-terminal JW646_13325 PF00391 PEP-utilising enzyme, mobile domain JW646_13325 PF02896 PEP-utilising enzyme, TIM barrel domain JW646_13340 PF04203 Sortase domain JW646_13355 PF13419 Haloacid dehalogenase-like hydrolase JW646_13365 PF13419 Haloacid dehalogenase-like hydrolase JW646_13375 PF02683 Cytochrome C biogenesis protein transmembrane region JW646_13380 PF00072 Response regulator receiver domain JW646_13380 PF00486 Transcriptional regulatory protein, C terminal JW646_13385 PF00672 HAMP domain JW646_13385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_13385 PF00512 His Kinase A (phospho-acceptor) domain JW646_13385 PF13426 PAS domain JW646_13390 PF00403 Heavy-metal-associated domain JW646_13420 PF02915 Rubrerythrin JW646_13430 PF12849 PBP superfamily domain JW646_13435 PF00528 Binding-protein-dependent transport system inner membrane component JW646_13440 PF00528 Binding-protein-dependent transport system inner membrane component JW646_13445 PF00005 ABC transporter JW646_13470 PF01891 Cobalt uptake substrate-specific transmembrane region JW646_13470 PF13190 PDGLE domain JW646_13480 PF00199 Catalase JW646_13485 PF00271 Helicase conserved C-terminal domain JW646_13485 PF00176 SNF2 family N-terminal domain JW646_13485 PF04434 SWIM zinc finger JW646_13495 PF02645 Uncharacterised protein, DegV family COG1307 JW646_13515 PF02645 Uncharacterised protein, DegV family COG1307 JW646_13525 PF03965 Penicillinase repressor JW646_13530 PF05569 BlaR1 peptidase M56 JW646_13530 PF00905 Penicillin binding protein transpeptidase domain JW646_13545 PF00005 ABC transporter JW646_13565 PF00294 pfkB family carbohydrate kinase JW646_13575 PF00892 EamA-like transporter family JW646_13585 PF01966 HD domain JW646_13595 PF03176 MMPL family JW646_13605 PF00210 Ferritin-like domain JW646_13630 PF00196 Bacterial regulatory proteins, luxR family JW646_13630 PF00072 Response regulator receiver domain JW646_13670 PF00005 ABC transporter JW646_13680 PF12728 Helix-turn-helix domain JW646_13680 PF12727 PBP superfamily domain JW646_13690 PF00528 Binding-protein-dependent transport system inner membrane component JW646_13695 PF12857 TOBE-like domain JW646_13695 PF17850 CysA C-terminal regulatory domain JW646_13695 PF00005 ABC transporter JW646_13700 PF01713 Smr domain JW646_13700 PF00488 MutS domain V JW646_13715 PF00999 Sodium/hydrogen exchanger family JW646_13715 PF03471 Transporter associated domain JW646_13715 PF02080 TrkA-C domain JW646_13725 PF13407 Periplasmic binding protein domain JW646_13730 PF02653 Branched-chain amino acid transport system / permease component JW646_13735 PF00005 ABC transporter JW646_13740 PF05025 RbsD / FucU transport protein family JW646_13745 PF00294 pfkB family carbohydrate kinase JW646_13765 PF00375 Sodium:dicarboxylate symporter family JW646_13775 PF00817 impB/mucB/samB family JW646_13775 PF11799 impB/mucB/samB family C-terminal domain JW646_13780 PF09335 SNARE associated Golgi protein JW646_13790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JW646_13800 PF01554 MatE JW646_13810 PF01979 Amidohydrolase family JW646_13810 PF13382 Adenine deaminase C-terminal domain JW646_13815 PF00497 Bacterial extracellular solute-binding proteins, family 3 JW646_13820 PF00528 Binding-protein-dependent transport system inner membrane component JW646_13825 PF00005 ABC transporter JW646_13830 PF03180 NLPA lipoprotein JW646_13835 PF08000 Bacterial PH domain JW646_13835 PF11724 YvbH-like oligomerisation region JW646_13840 PF01966 HD domain JW646_13840 PF00072 Response regulator receiver domain JW646_13850 PF00465 Iron-containing alcohol dehydrogenase JW646_13850 PF00171 Aldehyde dehydrogenase family JW646_13855 PF03471 Transporter associated domain JW646_13855 PF00999 Sodium/hydrogen exchanger family JW646_13860 PF01966 HD domain JW646_13860 PF01743 Poly A polymerase head domain JW646_13860 PF12627 Probable RNA and SrmB- binding site of polymerase A JW646_13865 PF00464 Serine hydroxymethyltransferase JW646_13875 PF00171 Aldehyde dehydrogenase family JW646_13875 PF00465 Iron-containing alcohol dehydrogenase JW646_13880 PF03590 Aspartate-ammonia ligase JW646_13885 PF00990 Diguanylate cyclase, GGDEF domain JW646_13885 PF05230 MASE2 domain JW646_13890 PF00664 ABC transporter transmembrane region JW646_13890 PF00005 ABC transporter JW646_13920 PF00375 Sodium:dicarboxylate symporter family JW646_13925 PF01964 Radical SAM ThiC family JW646_13930 PF01594 AI-2E family transporter JW646_13935 PF02682 Carboxyltransferase domain, subdomain C and D JW646_13940 PF02626 Carboxyltransferase domain, subdomain A and B JW646_13945 PF00364 Biotin-requiring enzyme JW646_13950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JW646_13950 PF00289 Biotin carboxylase, N-terminal domain JW646_13950 PF02785 Biotin carboxylase C-terminal domain JW646_13955 PF07286 Protein of unknown function (DUF1445) JW646_13960 PF03746 LamB/YcsF family JW646_13965 PF01566 Natural resistance-associated macrophage protein JW646_13970 PF04204 Homoserine O-succinyltransferase JW646_13980 PF00069 Protein kinase domain JW646_13980 PF03793 PASTA domain JW646_13995 PF01926 50S ribosome-binding GTPase JW646_13995 PF06071 Protein of unknown function (DUF933) JW646_14000 PF05193 Peptidase M16 inactive domain JW646_14005 PF00675 Insulinase (Peptidase family M16) JW646_14005 PF05193 Peptidase M16 inactive domain JW646_14015 PF01790 Prolipoprotein diacylglyceryl transferase JW646_14020 PF01795 MraW methylase family JW646_14025 PF01053 Cys/Met metabolism PLP-dependent enzyme JW646_14030 PF01554 MatE JW646_14045 PF00905 Penicillin binding protein transpeptidase domain JW646_14045 PF03793 PASTA domain JW646_14045 PF03717 Penicillin-binding Protein dimerisation domain JW646_14050 PF02875 Mur ligase family, glutamate ligase domain JW646_14050 PF01225 Mur ligase family, catalytic domain JW646_14050 PF08245 Mur ligase middle domain JW646_14055 PF00953 Glycosyl transferase family 4 JW646_14055 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JW646_14060 PF08245 Mur ligase middle domain JW646_14060 PF02875 Mur ligase family, glutamate ligase domain JW646_14065 PF01098 Cell cycle protein JW646_14070 PF04101 Glycosyltransferase family 28 C-terminal domain JW646_14070 PF03033 Glycosyltransferase family 28 N-terminal domain JW646_14075 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JW646_14080 PF03799 Cell division protein FtsQ JW646_14080 PF08478 POTRA domain, FtsQ-type JW646_14085 PF12327 FtsZ family, C-terminal domain JW646_14085 PF00091 Tubulin/FtsZ family, GTPase domain JW646_14090 PF03419 Sporulation factor SpoIIGA JW646_14095 PF04545 Sigma-70, region 4 JW646_14095 PF04542 Sigma-70 region 2 JW646_14100 PF04539 Sigma-70 region 3 JW646_14100 PF04542 Sigma-70 region 2 JW646_14100 PF04545 Sigma-70, region 4 JW646_14105 PF05239 PRC-barrel domain JW646_14110 PF03477 ATP cone domain JW646_14115 PF02578 Multi-copper polyphenol oxidoreductase laccase JW646_14120 PF00072 Response regulator receiver domain JW646_14120 PF00486 Transcriptional regulatory protein, C terminal JW646_14125 PF00512 His Kinase A (phospho-acceptor) domain JW646_14125 PF00989 PAS fold JW646_14125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_14125 PF16736 Single Cache-like JW646_14130 PF14045 YIEGIA protein JW646_14135 PF14045 YIEGIA protein JW646_14150 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JW646_14150 PF01926 50S ribosome-binding GTPase JW646_14155 PF02660 Glycerol-3-phosphate acyltransferase JW646_14160 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JW646_14160 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JW646_14165 PF09547 Stage IV sporulation protein A (spore_IV_A) JW646_14170 PF01235 Sodium:alanine symporter family JW646_14175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JW646_14175 PF02403 Seryl-tRNA synthetase N-terminal domain JW646_14190 PF01168 Alanine racemase, N-terminal domain JW646_14195 PF04472 Cell division protein SepF JW646_14210 PF05103 DivIVA protein JW646_14215 PF08264 Anticodon-binding domain of tRNA JW646_14215 PF00133 tRNA synthetases class I (I, L, M and V) JW646_14220 PF08360 QacR-like protein, C-terminal region JW646_14220 PF00440 Bacterial regulatory proteins, tetR family JW646_14225 PF02645 Uncharacterised protein, DegV family COG1307 JW646_14230 PF01048 Phosphorylase superfamily JW646_14240 PF01258 Prokaryotic dksA/traR C4-type zinc finger JW646_14245 PF01522 Polysaccharide deacetylase JW646_14250 PF01252 Signal peptidase (SPase) II JW646_14255 PF00849 RNA pseudouridylate synthase JW646_14255 PF01479 S4 domain JW646_14260 PF00156 Phosphoribosyl transferase domain JW646_14265 PF00860 Permease family JW646_14275 PF05670 NFACT protein RNA binding domain JW646_14285 PF01678 Diaminopimelate epimerase JW646_14290 PF08340 Domain of unknown function (DUF1732) JW646_14290 PF03755 YicC-like family, N-terminal region JW646_14295 PF00625 Guanylate kinase JW646_14300 PF01192 RNA polymerase Rpb6 JW646_14305 PF04127 DNA / pantothenate metabolism flavoprotein JW646_14305 PF02441 Flavoprotein JW646_14310 PF04851 Type III restriction enzyme, res subunit JW646_14310 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JW646_14310 PF00271 Helicase conserved C-terminal domain JW646_14310 PF17764 3′ DNA-binding domain (3′BD) JW646_14310 PF18074 Primosomal protein N C-terminal domain JW646_14315 PF01327 Polypeptide deformylase JW646_14320 PF02911 Formyl transferase, C-terminal domain JW646_14320 PF00551 Formyl transferase JW646_14330 PF04298 Putative neutral zinc metallopeptidase JW646_14335 PF01189 16S rRNA methyltransferase RsmB/F JW646_14335 PF01029 NusB family JW646_14340 PF04055 Radical SAM superfamily JW646_14350 PF03793 PASTA domain JW646_14350 PF00069 Protein kinase domain JW646_14355 PF03193 RsgA GTPase JW646_14355 PF16745 RsgA N-terminal domain JW646_14360 PF00834 Ribulose-phosphate 3 epimerase family JW646_14370 PF00830 Ribosomal L28 family JW646_14380 PF02734 DAK2 domain JW646_14380 PF13684 Dihydroxyacetone kinase family JW646_14385 PF00270 DEAD/DEAH box helicase JW646_14385 PF00271 Helicase conserved C-terminal domain JW646_14385 PF17191 RecG wedge domain JW646_14395 PF01467 Cytidylyltransferase-like JW646_14405 PF07670 Nucleoside recognition JW646_14410 PF05636 HIGH Nucleotidyl Transferase JW646_14415 PF00871 Acetokinase family JW646_14425 PF01783 Ribosomal L32p protein family JW646_14430 PF02504 Fatty acid synthesis protein JW646_14435 PF03883 Peroxide stress protein YaaA JW646_14485 PF03780 Asp23 family, cell envelope-related function JW646_14490 PF01029 NusB family JW646_14495 PF00814 Glycoprotease family JW646_14500 PF02601 Exonuclease VII, large subunit JW646_14500 PF13742 OB-fold nucleic acid binding domain JW646_14505 PF02609 Exonuclease VII small subunit JW646_14510 PF00348 Polyprenyl synthetase JW646_14515 PF02681 Divergent PAP2 family JW646_14520 PF02780 Transketolase, C-terminal domain JW646_14520 PF02779 Transketolase, pyrimidine binding domain JW646_14520 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JW646_14525 PF01728 FtsJ-like methyltransferase JW646_14525 PF01479 S4 domain JW646_14530 PF13476 AAA domain JW646_14540 PF00072 Response regulator receiver domain JW646_14540 PF08769 Sporulation initiation factor Spo0A C terminal JW646_14545 PF01743 Poly A polymerase head domain JW646_14545 PF12627 Probable RNA and SrmB- binding site of polymerase A JW646_14545 PF13735 tRNA nucleotidyltransferase domain 2 putative JW646_14560 PF00535 Glycosyl transferase family 2 JW646_14575 PF00293 NUDIX domain JW646_14585 PF02899 Phage integrase, N-terminal SAM-like domain JW646_14585 PF00589 Phage integrase family JW646_14590 PF01676 Metalloenzyme superfamily JW646_14595 PF02885 Glycosyl transferase family, helical bundle domain JW646_14595 PF00591 Glycosyl transferase family, a/b domain JW646_14595 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JW646_14600 PF02618 YceG-like family JW646_14605 PF01596 O-methyltransferase JW646_14610 PF01136 Peptidase family U32 JW646_14610 PF16325 Peptidase family U32 C-terminal domain JW646_14615 PF01047 MarR family JW646_14620 PF00905 Penicillin binding protein transpeptidase domain JW646_14620 PF03717 Penicillin-binding Protein dimerisation domain JW646_14625 PF04542 Sigma-70 region 2 JW646_14625 PF04545 Sigma-70, region 4 JW646_14630 PF00512 His Kinase A (phospho-acceptor) domain JW646_14630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_14635 PF00512 His Kinase A (phospho-acceptor) domain JW646_14635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_14635 PF00989 PAS fold JW646_14635 PF16736 Single Cache-like JW646_14640 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JW646_14640 PF01488 Shikimate / quinate 5-dehydrogenase JW646_14640 PF08501 Shikimate dehydrogenase substrate binding domain JW646_14665 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JW646_14665 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_14670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JW646_14670 PF03466 LysR substrate binding domain JW646_14675 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JW646_14675 PF08501 Shikimate dehydrogenase substrate binding domain JW646_14680 PF01487 Type I 3-dehydroquinase JW646_14685 PF00375 Sodium:dicarboxylate symporter family JW646_14690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JW646_14690 PF03466 LysR substrate binding domain JW646_14700 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_14700 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JW646_14705 PF08501 Shikimate dehydrogenase substrate binding domain JW646_14705 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JW646_14710 PF07690 Major Facilitator Superfamily JW646_14720 PF01202 Shikimate kinase JW646_14725 PF01132 Elongation factor P (EF-P) OB domain JW646_14725 PF08207 Elongation factor P (EF-P) KOW-like domain JW646_14725 PF09285 Elongation factor P, C-terminal JW646_14735 PF00035 Double-stranded RNA binding motif JW646_14735 PF14622 Ribonuclease-III-like JW646_14740 PF16199 Radical_SAM C-terminal domain JW646_14740 PF04055 Radical SAM superfamily JW646_14740 PF00583 Acetyltransferase (GNAT) family JW646_14745 PF06470 SMC proteins Flexible Hinge Domain JW646_14745 PF02463 RecF/RecN/SMC N terminal domain JW646_14750 PF00448 SRP54-type protein, GTPase domain JW646_14750 PF02881 SRP54-type protein, helical bundle domain JW646_14755 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JW646_14760 PF00448 SRP54-type protein, GTPase domain JW646_14760 PF02881 SRP54-type protein, helical bundle domain JW646_14760 PF02978 Signal peptide binding domain JW646_14765 PF00886 Ribosomal protein S16 JW646_14775 PF05239 PRC-barrel domain JW646_14775 PF01782 RimM N-terminal domain JW646_14780 PF01746 tRNA (Guanine-1)-methyltransferase JW646_14785 PF01245 Ribosomal protein L19 JW646_14790 PF01926 50S ribosome-binding GTPase JW646_14800 PF03553 Na+/H+ antiporter family JW646_14805 PF01351 Ribonuclease HII JW646_14810 PF01070 FMN-dependent dehydrogenase JW646_14810 PF01070 FMN-dependent dehydrogenase JW646_14820 PF03466 LysR substrate binding domain JW646_14820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JW646_14835 PF00270 DEAD/DEAH box helicase JW646_14835 PF00271 Helicase conserved C-terminal domain JW646_14840 PF09924 Uncharacterised conserved protein (DUF2156) JW646_14840 PF03706 Lysylphosphatidylglycerol synthase TM region JW646_14855 PF06969 HemN C-terminal domain JW646_14855 PF04055 Radical SAM superfamily JW646_14860 PF01554 MatE JW646_14870 PF01501 Glycosyl transferase family 8 JW646_14870 PF00535 Glycosyl transferase family 2 JW646_14880 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JW646_14885 PF00005 ABC transporter JW646_14895 PF13411 MerR HTH family regulatory protein JW646_14900 PF01966 HD domain JW646_14905 PF00905 Penicillin binding protein transpeptidase domain JW646_14905 PF05223 NTF2-like N-terminal transpeptidase domain JW646_14905 PF03717 Penicillin-binding Protein dimerisation domain JW646_14915 PF01769 Divalent cation transporter JW646_14915 PF03448 MgtE intracellular N domain JW646_14915 PF00571 CBS domain JW646_14920 PF00072 Response regulator receiver domain JW646_14920 PF00486 Transcriptional regulatory protein, C terminal JW646_14925 PF00672 HAMP domain JW646_14925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_14925 PF00512 His Kinase A (phospho-acceptor) domain JW646_14930 PF12704 MacB-like periplasmic core domain JW646_14930 PF00005 ABC transporter JW646_14930 PF02687 FtsX-like permease family JW646_14935 PF12704 MacB-like periplasmic core domain JW646_14935 PF00005 ABC transporter JW646_14935 PF02687 FtsX-like permease family JW646_14940 PF04892 VanZ like family JW646_14945 PF09587 Bacterial capsule synthesis protein PGA_cap JW646_14955 PF09587 Bacterial capsule synthesis protein PGA_cap JW646_14960 PF02021 Uncharacterised protein family UPF0102 JW646_14965 PF01078 Magnesium chelatase, subunit ChlI JW646_14965 PF13335 Magnesium chelatase, subunit ChlI C-terminal JW646_14970 PF17782 DprA winged helix domain JW646_14970 PF02481 DNA recombination-mediator protein A JW646_14975 PF01131 DNA topoisomerase JW646_14975 PF01396 Topoisomerase DNA binding C4 zinc finger JW646_14975 PF01751 Toprim domain JW646_14980 PF06018 CodY GAF-like domain JW646_14980 PF08222 CodY helix-turn-helix domain JW646_14985 PF16193 AAA C-terminal domain JW646_14985 PF12002 MgsA AAA+ ATPase C terminal JW646_14985 PF05496 Holliday junction DNA helicase RuvB P-loop domain JW646_15000 PF02082 Transcriptional regulator JW646_15005 PF00266 Aminotransferase class-V JW646_15010 PF01592 NifU-like N terminal domain JW646_15020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JW646_15020 PF02272 DHHA1 domain JW646_15020 PF01411 tRNA synthetases class II (A) JW646_15025 PF06135 IreB regulatory phosphoprotein JW646_15040 PF03652 Holliday junction resolvase JW646_15045 PF06949 Protein of unknown function (DUF1292) JW646_15050 PF03816 Cell envelope-related transcriptional attenuator domain JW646_15055 PF01475 Ferric uptake regulator family JW646_15060 PF00753 Metallo-beta-lactamase superfamily JW646_15060 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JW646_15060 PF17770 Ribonuclease J C-terminal domain JW646_15065 PF06133 Control of competence regulator ComK, YlbF/YmcA JW646_15070 PF04456 Protein of unknown function (DUF503) JW646_15075 PF07943 Penicillin-binding protein 5, C-terminal domain JW646_15075 PF00768 D-alanyl-D-alanine carboxypeptidase JW646_15080 PF02163 Peptidase family M50 JW646_15085 PF02616 Segregation and condensation protein ScpA JW646_15090 PF04079 Segregation and condensation complex subunit ScpB JW646_15105 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JW646_15115 PF02146 Sir2 family JW646_15125 PF07733 Bacterial DNA polymerase III alpha NTPase domain JW646_15125 PF14579 Helix-hairpin-helix motif JW646_15125 PF02811 PHP domain JW646_15125 PF00929 Exonuclease JW646_15125 PF01336 OB-fold nucleic acid binding domain JW646_15125 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JW646_15125 PF11490 DNA polymerase III polC-type N-terminus II JW646_15130 PF10688 Bacterial inner membrane protein JW646_15135 PF02576 RimP N-terminal domain JW646_15135 PF17384 RimP C-terminal SH3 domain JW646_15140 PF13184 NusA-like KH domain JW646_15140 PF08529 NusA N-terminal domain JW646_15140 PF00575 S1 RNA binding domain JW646_15145 PF04296 Protein of unknown function (DUF448) JW646_15150 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JW646_15155 PF04760 Translation initiation factor IF-2, N-terminal region JW646_15155 PF11987 Translation-initiation factor 2 JW646_15155 PF00009 Elongation factor Tu GTP binding domain JW646_15160 PF02033 Ribosome-binding factor A JW646_15165 PF02272 DHHA1 domain JW646_15165 PF01368 DHH family JW646_15170 PF16198 tRNA pseudouridylate synthase B C-terminal domain JW646_15170 PF01509 TruB family pseudouridylate synthase (N terminal domain) JW646_15175 PF01687 Riboflavin kinase JW646_15175 PF06574 FAD synthetase JW646_15180 PF00312 Ribosomal protein S15 JW646_15185 PF02645 Uncharacterised protein, DegV family COG1307 JW646_15190 PF00575 S1 RNA binding domain JW646_15190 PF03725 3' exoribonuclease family, domain 2 JW646_15190 PF01138 3' exoribonuclease family, domain 1 JW646_15190 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JW646_15190 PF00013 KH domain JW646_15195 PF01522 Polysaccharide deacetylase JW646_15200 PF00675 Insulinase (Peptidase family M16) JW646_15200 PF05193 Peptidase M16 inactive domain JW646_15205 PF05239 PRC-barrel domain JW646_15210 PF00696 Amino acid kinase family JW646_15210 PF13840 ACT domain JW646_15215 PF00574 Clp protease JW646_15220 PF01580 FtsK/SpoIIIE family JW646_15220 PF09397 Ftsk gamma domain JW646_15220 PF17854 FtsK alpha domain JW646_15220 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JW646_15230 PF18693 TRAM domain JW646_15230 PF00919 Uncharacterized protein family UPF0004 JW646_15230 PF04055 Radical SAM superfamily JW646_15235 PF01066 CDP-alcohol phosphatidyltransferase JW646_15240 PF00154 recA bacterial DNA recombination protein JW646_15245 PF12072 Domain of unknown function (DUF3552) JW646_15245 PF00013 KH domain JW646_15245 PF01966 HD domain JW646_15255 PF00589 Phage integrase family JW646_15255 PF02899 Phage integrase, N-terminal SAM-like domain JW646_15270 PF00155 Aminotransferase class I and II JW646_15280 PF03372 Endonuclease/Exonuclease/phosphatase family JW646_15295 PF01551 Peptidase family M23 JW646_15305 PF00534 Glycosyl transferases group 1 JW646_15305 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JW646_15315 PF03551 Transcriptional regulator PadR-like family JW646_15335 PF00690 Cation transporter/ATPase, N-terminus JW646_15335 PF00689 Cation transporting ATPase, C-terminus JW646_15340 PF00202 Aminotransferase class-III JW646_15350 PF08543 Phosphomethylpyrimidine kinase JW646_15360 PF00313 'Cold-shock' DNA-binding domain JW646_15375 PF00690 Cation transporter/ATPase, N-terminus JW646_15375 PF00689 Cation transporting ATPase, C-terminus JW646_15380 PF01037 Lrp/AsnC ligand binding domain JW646_15415 PF00188 Cysteine-rich secretory protein family JW646_15425 PF13627 Prokaryotic lipoprotein-attachment site JW646_15425 PF00080 Copper/zinc superoxide dismutase (SODC) JW646_15440 PF06961 Protein of unknown function (DUF1294) JW646_15445 PF00313 'Cold-shock' DNA-binding domain JW646_15450 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JW646_15450 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JW646_15455 PF03600 Citrate transporter JW646_15455 PF02080 TrkA-C domain JW646_15475 PF02016 LD-carboxypeptidase N-terminal domain JW646_15475 PF17676 LD-carboxypeptidase C-terminal domain JW646_15490 PF03009 Glycerophosphoryl diester phosphodiesterase family JW646_15495 PF00005 ABC transporter JW646_15495 PF16326 ABC transporter C-terminal domain JW646_15495 PF12848 ABC transporter JW646_15505 PF00155 Aminotransferase class I and II JW646_15510 PF00155 Aminotransferase class I and II JW646_15510 PF00392 Bacterial regulatory proteins, gntR family JW646_15515 PF07478 D-ala D-ala ligase C-terminus JW646_15515 PF01820 D-ala D-ala ligase N-terminus JW646_15520 PF00672 HAMP domain JW646_15520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JW646_15520 PF17202 Single cache domain 3 JW646_15535 PF00082 Subtilase family JW646_15535 PF06280 Fn3-like domain JW646_15535 PF02225 PA domain JW646_15540 PF02225 PA domain JW646_15540 PF00082 Subtilase family JW646_15540 PF06280 Fn3-like domain JW646_15550 PF01476 LysM domain JW646_15550 PF00246 Zinc carboxypeptidase JW646_15555 PF00583 Acetyltransferase (GNAT) family JW646_15565 PF03033 Glycosyltransferase family 28 N-terminal domain JW646_15575 PF07883 Cupin domain JW646_15585 PF01595 Cyclin M transmembrane N-terminal domain JW646_15585 PF03471 Transporter associated domain JW646_15585 PF00571 CBS domain JW646_15590 PF01595 Cyclin M transmembrane N-terminal domain JW646_15590 PF03471 Transporter associated domain JW646_15590 PF00571 CBS domain JW646_15600 PF01425 Amidase JW646_15605 PF01208 Uroporphyrinogen decarboxylase (URO-D) JW646_15615 PF12833 Helix-turn-helix domain JW646_15615 PF06445 GyrI-like small molecule binding domain JW646_15640 PF00069 Protein kinase domain JW646_15655 PF07995 Glucose / Sorbosone dehydrogenase JW646_15690 PF13349 Putative adhesin JW646_15765 PF13302 Acetyltransferase (GNAT) domain JW646_15770 PF14602 Hexapeptide repeat of succinyl-transferase JW646_15770 PF12464 Maltose acetyltransferase JW646_15780 PF10502 Signal peptidase, peptidase S26 JW646_15805 PF00005 ABC transporter JW646_15805 PF12848 ABC transporter JW646_15820 PF00269 Small, acid-soluble spore proteins, alpha/beta type JW646_15825 PF02780 Transketolase, C-terminal domain JW646_15825 PF02779 Transketolase, pyrimidine binding domain JW646_15825 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JW646_15830 PF02378 Phosphotransferase system, EIIC JW646_15830 PF00367 phosphotransferase system, EIIB JW646_15840 PF11975 Family 4 glycosyl hydrolase C-terminal domain JW646_15840 PF02056 Family 4 glycosyl hydrolase JW646_15845 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JW646_15845 PF02378 Phosphotransferase system, EIIC JW646_15845 PF00367 phosphotransferase system, EIIB JW646_15850 PF01418 Helix-turn-helix domain, rpiR family JW646_15850 PF01380 SIS domain JW646_15855 PF01380 SIS domain JW646_15855 PF01418 Helix-turn-helix domain, rpiR family JW646_15860 PF01183 Glycosyl hydrolases family 25 JW646_15865 PF08448 PAS fold JW646_15865 PF00990 Diguanylate cyclase, GGDEF domain JW646_15875 PF01712 Deoxynucleoside kinase JW646_15880 PF01712 Deoxynucleoside kinase JW646_15885 PF00266 Aminotransferase class-V JW646_15895 PF02915 Rubrerythrin JW646_15905 PF02915 Rubrerythrin JW646_15910 PF00793 DAHP synthetase I family JW646_15910 PF18152 DAHP synthase ferredoxin-like domain JW646_15915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JW646_15920 PF01264 Chorismate synthase JW646_15925 PF01817 Chorismate mutase type II JW646_15925 PF00800 Prephenate dehydratase JW646_15930 PF02153 Prephenate dehydrogenase JW646_15940 PF01979 Amidohydrolase family JW646_15955 PF05173 Dihydrodipicolinate reductase, C-terminus JW646_15955 PF01113 Dihydrodipicolinate reductase, N-terminus JW646_15965 PF00005 ABC transporter JW646_15975 PF02872 5'-nucleotidase, C-terminal domain JW646_15975 PF00149 Calcineurin-like phosphoesterase JW646_15980 PF02673 Bacitracin resistance protein BacA JW646_15985 PF00486 Transcriptional regulatory protein, C terminal JW646_15985 PF00072 Response regulator receiver domain JW646_15990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_15995 PF00005 ABC transporter JW646_16000 PF02687 FtsX-like permease family JW646_16005 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JW646_16005 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JW646_16030 PF02310 B12 binding domain JW646_16030 PF02607 B12 binding domain JW646_16035 PF01208 Uroporphyrinogen decarboxylase (URO-D) JW646_16045 PF01208 Uroporphyrinogen decarboxylase (URO-D) JW646_16070 PF05857 TraX protein JW646_16095 PF03606 C4-dicarboxylate anaerobic carrier JW646_16100 PF01546 Peptidase family M20/M25/M40 JW646_16100 PF07687 Peptidase dimerisation domain JW646_16105 PF00392 Bacterial regulatory proteins, gntR family JW646_16110 PF00005 ABC transporter JW646_16125 PF00486 Transcriptional regulatory protein, C terminal JW646_16125 PF00072 Response regulator receiver domain JW646_16130 PF18698 Histidine kinase sensor domain JW646_16130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_16130 PF00672 HAMP domain JW646_16130 PF00989 PAS fold JW646_16130 PF00512 His Kinase A (phospho-acceptor) domain JW646_16135 PF12704 MacB-like periplasmic core domain JW646_16135 PF02687 FtsX-like permease family JW646_16135 PF00005 ABC transporter JW646_16145 PF01966 HD domain JW646_16145 PF13286 Phosphohydrolase-associated domain JW646_16160 PF01327 Polypeptide deformylase JW646_16180 PF00689 Cation transporting ATPase, C-terminus JW646_16180 PF00690 Cation transporter/ATPase, N-terminus JW646_16205 PF02374 Anion-transporting ATPase JW646_16205 PF17886 HSP20-like domain found in ArsA JW646_16215 PF02374 Anion-transporting ATPase JW646_16215 PF17886 HSP20-like domain found in ArsA JW646_16220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_16220 PF00672 HAMP domain JW646_16220 PF00512 His Kinase A (phospho-acceptor) domain JW646_16225 PF00486 Transcriptional regulatory protein, C terminal JW646_16225 PF00072 Response regulator receiver domain JW646_16240 PF00005 ABC transporter JW646_16245 PF00854 POT family JW646_16250 PF00196 Bacterial regulatory proteins, luxR family JW646_16250 PF00072 Response regulator receiver domain JW646_16255 PF07730 Histidine kinase JW646_16255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_16260 PF00005 ABC transporter JW646_16275 PF00117 Glutamine amidotransferase class-I JW646_16280 PF04715 Anthranilate synthase component I, N terminal region JW646_16280 PF00425 chorismate binding enzyme JW646_16285 PF01063 Amino-transferase class IV JW646_16290 PF01817 Chorismate mutase type II JW646_16290 PF00793 DAHP synthetase I family JW646_16295 PF00313 'Cold-shock' DNA-binding domain JW646_16310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JW646_16310 PF00672 HAMP domain JW646_16310 PF02743 Cache domain JW646_16350 PF13087 AAA domain JW646_16350 PF13195 Protein of unknown function (DUF4011) JW646_16350 PF13195 Protein of unknown function (DUF4011) JW646_16350 PF13087 AAA domain JW646_16350 PF13086 AAA domain JW646_16350 PF13086 AAA domain JW646_16355 PF12848 ABC transporter JW646_16355 PF00005 ABC transporter JW646_16360 PF18665 Tetracyclin repressor-like, C-terminal domain JW646_16360 PF00440 Bacterial regulatory proteins, tetR family JW646_16370 PF00141 Peroxidase JW646_16380 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JW646_16380 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JW646_16395 PF00664 ABC transporter transmembrane region JW646_16395 PF00005 ABC transporter JW646_16400 PF00664 ABC transporter transmembrane region JW646_16400 PF00005 ABC transporter JW646_16410 PF00313 'Cold-shock' DNA-binding domain JW646_16415 PF05899 Protein of unknown function (DUF861) JW646_16415 PF07883 Cupin domain JW646_16420 PF06725 3D domain JW646_16420 PF01476 LysM domain JW646_16445 PF08239 Bacterial SH3 domain JW646_16445 PF01520 N-acetylmuramoyl-L-alanine amidase JW646_16450 PF00266 Aminotransferase class-V JW646_16485 PF01661 Macro domain JW646_16520 PF12161 HsdM N-terminal domain JW646_16520 PF02384 N-6 DNA Methylase JW646_16525 PF01420 Type I restriction modification DNA specificity domain JW646_16540 PF11867 Domain of unknown function (DUF3387) JW646_16540 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JW646_16540 PF18766 SWI2/SNF2 ATPase JW646_16590 PF01546 Peptidase family M20/M25/M40 JW646_16605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JW646_16605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JW646_16610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JW646_16610 PF03466 LysR substrate binding domain JW646_16615 PF08331 Domain of unknown function (DUF1730) JW646_16625 PF00581 Rhodanese-like domain JW646_16645 PF01695 IstB-like ATP binding protein JW646_16675 PF00266 Aminotransferase class-V JW646_16705 PF01381 Helix-turn-helix JW646_16725 PF12801 4Fe-4S binding domain JW646_16725 PF04205 FMN-binding domain JW646_16745 PF00999 Sodium/hydrogen exchanger family JW646_16750 PF00270 DEAD/DEAH box helicase JW646_16750 PF00271 Helicase conserved C-terminal domain JW646_16765 PF00171 Aldehyde dehydrogenase family JW646_16815 PF10990 Protein of unknown function (DUF2809) JW646_16830 PF13673 Acetyltransferase (GNAT) domain JW646_16845 PF01594 AI-2E family transporter JW646_16905 PF01321 Creatinase/Prolidase N-terminal domain JW646_16905 PF00557 Metallopeptidase family M24 JW646_16970 PF03023 Lipid II flippase MurJ JW646_17020 PF01168 Alanine racemase, N-terminal domain JW646_17025 PF07670 Nucleoside recognition JW646_17030 PF03793 PASTA domain JW646_17030 PF00069 Protein kinase domain JW646_17035 PF18719 ArlS sensor domain JW646_17035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_17035 PF00512 His Kinase A (phospho-acceptor) domain JW646_17040 PF00072 Response regulator receiver domain JW646_17040 PF00486 Transcriptional regulatory protein, C terminal JW646_17045 PF00664 ABC transporter transmembrane region JW646_17045 PF00005 ABC transporter JW646_17050 PF00005 ABC transporter JW646_17050 PF00664 ABC transporter transmembrane region JW646_17065 PF04294 VanW like protein JW646_17070 PF02915 Rubrerythrin JW646_17080 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JW646_17080 PF00970 Oxidoreductase FAD-binding domain JW646_17090 PF02796 Helix-turn-helix domain of resolvase JW646_17090 PF00239 Resolvase, N terminal domain JW646_17105 PF01381 Helix-turn-helix JW646_17135 PF01695 IstB-like ATP binding protein JW646_17150 PF00436 Single-strand binding protein family JW646_17195 PF00589 Phage integrase family JW646_17275 PF01476 LysM domain JW646_17280 PF01476 LysM domain JW646_17280 PF00877 NlpC/P60 family JW646_17280 PF08239 Bacterial SH3 domain JW646_17330 PF05105 Bacteriophage holin family JW646_17355 PF02525 Flavodoxin-like fold JW646_17360 PF13393 Histidyl-tRNA synthetase JW646_17365 PF01634 ATP phosphoribosyltransferase JW646_17370 PF00155 Aminotransferase class I and II JW646_17375 PF00475 Imidazoleglycerol-phosphate dehydratase JW646_17380 PF00117 Glutamine amidotransferase class-I JW646_17385 PF00977 Histidine biosynthesis protein JW646_17390 PF00977 Histidine biosynthesis protein JW646_17395 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JW646_17395 PF01502 Phosphoribosyl-AMP cyclohydrolase JW646_17405 PF01522 Polysaccharide deacetylase JW646_17410 PF05698 Bacterial trigger factor protein (TF) C-terminus JW646_17420 PF00892 EamA-like transporter family JW646_17425 PF00209 Sodium:neurotransmitter symporter family JW646_17430 PF01906 Putative heavy-metal-binding JW646_17440 PF06463 Molybdenum Cofactor Synthesis C JW646_17440 PF04055 Radical SAM superfamily JW646_17455 PF02690 Na+/Pi-cotransporter JW646_17475 PF03616 Sodium/glutamate symporter JW646_17480 PF12833 Helix-turn-helix domain JW646_17485 PF00009 Elongation factor Tu GTP binding domain JW646_17485 PF03764 Elongation factor G, domain IV JW646_17485 PF00679 Elongation factor G C-terminus JW646_17485 PF14492 Elongation Factor G, domain II JW646_17495 PF17853 GGDEF-like domain JW646_17495 PF12833 Helix-turn-helix domain JW646_17500 PF00465 Iron-containing alcohol dehydrogenase JW646_17505 PF02733 Dak1 domain JW646_17515 PF01925 Sulfite exporter TauE/SafE JW646_17520 PF00005 ABC transporter JW646_17550 PF12848 ABC transporter JW646_17550 PF00005 ABC transporter JW646_17550 PF16326 ABC transporter C-terminal domain JW646_17580 PF00664 ABC transporter transmembrane region JW646_17580 PF00005 ABC transporter JW646_17585 PF00005 ABC transporter JW646_17585 PF00664 ABC transporter transmembrane region JW646_17600 PF01406 tRNA synthetases class I (C) catalytic domain JW646_17600 PF09190 DALR domain JW646_17610 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JW646_17610 PF01297 Zinc-uptake complex component A periplasmic JW646_17615 PF00005 ABC transporter JW646_17620 PF00950 ABC 3 transport family JW646_17635 PF00072 Response regulator receiver domain JW646_17635 PF00486 Transcriptional regulatory protein, C terminal JW646_17640 PF18719 ArlS sensor domain JW646_17640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_17640 PF00512 His Kinase A (phospho-acceptor) domain JW646_17645 PF00085 Thioredoxin JW646_17650 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_17655 PF01022 Bacterial regulatory protein, arsR family JW646_17670 PF03600 Citrate transporter JW646_17675 PF00270 DEAD/DEAH box helicase JW646_17675 PF00271 Helicase conserved C-terminal domain JW646_17675 PF00570 HRDC domain JW646_17675 PF16124 RecQ zinc-binding JW646_17675 PF09382 RQC domain JW646_17685 PF12787 EcsC protein family JW646_17700 PF00005 ABC transporter JW646_17705 PF00293 NUDIX domain JW646_17720 PF01541 GIY-YIG catalytic domain JW646_17725 PF08543 Phosphomethylpyrimidine kinase JW646_17730 PF02110 Hydroxyethylthiazole kinase family JW646_17735 PF03070 TENA/THI-4/PQQC family JW646_17745 PF02581 Thiamine monophosphate synthase JW646_17750 PF17922 Tetracyclin repressor-like, C-terminal domain JW646_17750 PF00440 Bacterial regulatory proteins, tetR family JW646_17765 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JW646_17765 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JW646_17770 PF13567 Domain of unknown function (DUF4131) JW646_17770 PF03772 Competence protein JW646_17770 PF00753 Metallo-beta-lactamase superfamily JW646_17795 PF08544 GHMP kinases C terminal JW646_17795 PF00288 GHMP kinases N terminal domain JW646_17800 PF00291 Pyridoxal-phosphate dependent enzyme JW646_17800 PF14821 Threonine synthase N terminus JW646_17810 PF03144 Elongation factor Tu domain 2 JW646_17810 PF00679 Elongation factor G C-terminus JW646_17810 PF00009 Elongation factor Tu GTP binding domain JW646_17810 PF14492 Elongation Factor G, domain II JW646_17820 PF07687 Peptidase dimerisation domain JW646_17820 PF01546 Peptidase family M20/M25/M40 JW646_17825 PF00072 Response regulator receiver domain JW646_17825 PF00486 Transcriptional regulatory protein, C terminal JW646_17830 PF00512 His Kinase A (phospho-acceptor) domain JW646_17830 PF00672 HAMP domain JW646_17830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_17830 PF13426 PAS domain JW646_17850 PF00860 Permease family JW646_17855 PF01554 MatE JW646_17860 PF01136 Peptidase family U32 JW646_17860 PF16325 Peptidase family U32 C-terminal domain JW646_17865 PF00557 Metallopeptidase family M24 JW646_17865 PF02810 SEC-C motif JW646_17870 PF00056 lactate/malate dehydrogenase, NAD binding domain JW646_17870 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JW646_17880 PF06965 Na+/H+ antiporter 1 JW646_17885 PF06177 QueT transporter JW646_17895 PF00005 ABC transporter JW646_17895 PF12848 ABC transporter JW646_17905 PF02423 Ornithine cyclodeaminase/mu-crystallin family JW646_17915 PF00920 Dehydratase family JW646_17920 PF11495 Archaeal transcriptional regulator TrmB JW646_17920 PF01978 Sugar-specific transcriptional regulator TrmB JW646_17930 PF00313 'Cold-shock' DNA-binding domain JW646_17945 PF13378 Enolase C-terminal domain-like JW646_17945 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JW646_17955 PF02310 B12 binding domain JW646_17960 PF13941 MutL protein JW646_17965 PF06368 Methylaspartate mutase E chain (MutE) JW646_17970 PF07476 Methylaspartate ammonia-lyase C-terminus JW646_17970 PF05034 Methylaspartate ammonia-lyase N-terminus JW646_17990 PF05036 Sporulation related domain JW646_17990 PF01520 N-acetylmuramoyl-L-alanine amidase JW646_18005 PF00781 Diacylglycerol kinase catalytic domain JW646_18010 PF00749 tRNA synthetases class I (E and Q), catalytic domain JW646_18010 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JW646_18030 PF00696 Amino acid kinase family JW646_18030 PF01842 ACT domain JW646_18030 PF13840 ACT domain JW646_18035 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JW646_18035 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JW646_18045 PF01479 S4 domain JW646_18045 PF00849 RNA pseudouridylate synthase JW646_18050 PF06962 Putative rRNA methylase JW646_18055 PF01418 Helix-turn-helix domain, rpiR family JW646_18055 PF01380 SIS domain JW646_18060 PF00682 HMGL-like JW646_18065 PF00330 Aconitase family (aconitate hydratase) JW646_18070 PF00180 Isocitrate/isopropylmalate dehydrogenase JW646_18070 PF18324 Hypothetical protein TT1725 JW646_18075 PF00753 Metallo-beta-lactamase superfamily JW646_18075 PF17770 Ribonuclease J C-terminal domain JW646_18075 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JW646_18100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JW646_18100 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_18115 PF02683 Cytochrome C biogenesis protein transmembrane region JW646_18120 PF06965 Na+/H+ antiporter 1 JW646_18130 PF03851 UV-endonuclease UvdE JW646_18140 PF04239 Protein of unknown function (DUF421) JW646_18150 PF04055 Radical SAM superfamily JW646_18150 PF01938 TRAM domain JW646_18150 PF00919 Uncharacterized protein family UPF0004 JW646_18155 PF00293 NUDIX domain JW646_18165 PF05190 MutS family domain IV JW646_18165 PF00488 MutS domain V JW646_18165 PF01624 MutS domain I JW646_18165 PF05188 MutS domain II JW646_18165 PF05192 MutS domain III JW646_18170 PF01119 DNA mismatch repair protein, C-terminal domain JW646_18170 PF08676 MutL C terminal dimerisation domain JW646_18180 PF17209 Hfq protein JW646_18185 PF06838 Methionine gamma-lyase JW646_18215 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JW646_18215 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_18215 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JW646_18235 PF01381 Helix-turn-helix JW646_18255 PF03374 Phage antirepressor protein KilAC domain JW646_18255 PF09669 Phage regulatory protein Rha (Phage_pRha) JW646_18305 PF04542 Sigma-70 region 2 JW646_18305 PF04539 Sigma-70 region 3 JW646_18305 PF04545 Sigma-70, region 4 JW646_18330 PF13392 HNH endonuclease JW646_18385 PF12961 Domain of unknown function (DUF3850) JW646_18425 PF10668 Phage terminase small subunit JW646_18425 PF03592 Terminase small subunit JW646_18550 PF05105 Bacteriophage holin family JW646_18570 PF02899 Phage integrase, N-terminal SAM-like domain JW646_18570 PF00589 Phage integrase family JW646_18610 PF03816 Cell envelope-related transcriptional attenuator domain JW646_18615 PF03816 Cell envelope-related transcriptional attenuator domain JW646_18620 PF02608 ABC transporter substrate-binding protein PnrA-like JW646_18625 PF00005 ABC transporter JW646_18630 PF02653 Branched-chain amino acid transport system / permease component JW646_18635 PF02653 Branched-chain amino acid transport system / permease component JW646_18640 PF00528 Binding-protein-dependent transport system inner membrane component JW646_18645 PF00005 ABC transporter JW646_18665 PF12146 Serine aminopeptidase, S33 JW646_18670 PF00535 Glycosyl transferase family 2 JW646_18670 PF01501 Glycosyl transferase family 8 JW646_18680 PF01048 Phosphorylase superfamily JW646_18685 PF01726 LexA DNA binding domain JW646_18685 PF00717 Peptidase S24-like JW646_18690 PF00589 Phage integrase family JW646_18690 PF02899 Phage integrase, N-terminal SAM-like domain JW646_18695 PF04232 Stage V sporulation protein S (SpoVS) JW646_18720 PF02390 Putative methyltransferase JW646_18730 PF00589 Phage integrase family JW646_18730 PF14659 Phage integrase, N-terminal SAM-like domain JW646_18735 PF01544 CorA-like Mg2+ transporter protein JW646_18740 PF00854 POT family JW646_18760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JW646_18760 PF03466 LysR substrate binding domain JW646_18785 PF03576 Peptidase family S58 JW646_18795 PF02401 LytB protein JW646_18800 PF01553 Acyltransferase JW646_18805 PF02224 Cytidylate kinase JW646_18815 PF00300 Histidine phosphatase superfamily (branch 1) JW646_18820 PF13538 UvrD-like helicase C-terminal domain JW646_18845 PF00004 ATPase family associated with various cellular activities (AAA) JW646_18845 PF07724 AAA domain (Cdc48 subfamily) JW646_18845 PF17871 AAA lid domain JW646_18845 PF02861 Clp amino terminal domain, pathogenicity island component JW646_18845 PF10431 C-terminal, D2-small domain, of ClpB protein JW646_18860 PF00005 ABC transporter JW646_18865 PF01212 Beta-eliminating lyase JW646_18870 PF02608 ABC transporter substrate-binding protein PnrA-like JW646_18875 PF00999 Sodium/hydrogen exchanger family JW646_18880 PF00764 Arginosuccinate synthase JW646_18890 PF01416 tRNA pseudouridine synthase JW646_18895 PF00271 Helicase conserved C-terminal domain JW646_18895 PF00176 SNF2 family N-terminal domain JW646_18895 PF04434 SWIM zinc finger JW646_18905 PF01255 Putative undecaprenyl diphosphate synthase JW646_18910 PF01593 Flavin containing amine oxidoreductase JW646_18915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JW646_18915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JW646_18920 PF00581 Rhodanese-like domain JW646_18925 PF00269 Small, acid-soluble spore proteins, alpha/beta type JW646_18935 PF01554 MatE JW646_18945 PF00989 PAS fold JW646_18945 PF18698 Histidine kinase sensor domain JW646_18945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_18945 PF00672 HAMP domain JW646_18945 PF00512 His Kinase A (phospho-acceptor) domain JW646_18965 PF02481 DNA recombination-mediator protein A JW646_18965 PF17782 DprA winged helix domain JW646_18975 PF01734 Patatin-like phospholipase JW646_18995 PF02517 CPBP intramembrane metalloprotease JW646_19000 PF00291 Pyridoxal-phosphate dependent enzyme JW646_19000 PF13291 ACT domain JW646_19020 PF00268 Ribonucleotide reductase, small chain JW646_19025 PF08343 Ribonucleotide reductase N-terminal JW646_19025 PF00317 Ribonucleotide reductase, all-alpha domain JW646_19025 PF02867 Ribonucleotide reductase, barrel domain JW646_19030 PF00550 Phosphopantetheine attachment site JW646_19035 PF03062 MBOAT, membrane-bound O-acyltransferase family JW646_19040 PF13193 AMP-binding enzyme C-terminal domain JW646_19040 PF00501 AMP-binding enzyme JW646_19060 PF00005 ABC transporter JW646_19060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JW646_19065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JW646_19065 PF00005 ABC transporter JW646_19070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JW646_19075 PF12911 N-terminal TM domain of oligopeptide transport permease C JW646_19075 PF00528 Binding-protein-dependent transport system inner membrane component JW646_19080 PF00528 Binding-protein-dependent transport system inner membrane component JW646_19085 PF08241 Methyltransferase domain JW646_19090 PF12826 Helix-hairpin-helix motif JW646_19090 PF01541 GIY-YIG catalytic domain JW646_19090 PF08459 UvrC Helix-hairpin-helix N-terminal JW646_19090 PF02151 UvrB/uvrC motif JW646_19105 PF09370 Phosphoenolpyruvate hydrolase-like JW646_19115 PF09370 Phosphoenolpyruvate hydrolase-like JW646_19120 PF00672 HAMP domain JW646_19120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_19120 PF00512 His Kinase A (phospho-acceptor) domain JW646_19120 PF13426 PAS domain JW646_19125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_19125 PF13426 PAS domain JW646_19125 PF08448 PAS fold JW646_19125 PF00512 His Kinase A (phospho-acceptor) domain JW646_19125 PF00072 Response regulator receiver domain JW646_19145 PF00009 Elongation factor Tu GTP binding domain JW646_19145 PF03144 Elongation factor Tu domain 2 JW646_19145 PF16658 Class II release factor RF3, C-terminal domain JW646_19155 PF03063 Prismane/CO dehydrogenase family JW646_19160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JW646_19160 PF03466 LysR substrate binding domain JW646_19175 PF03965 Penicillinase repressor JW646_19305 PF01758 Sodium Bile acid symporter family JW646_19320 PF01022 Bacterial regulatory protein, arsR family JW646_19325 PF01022 Bacterial regulatory protein, arsR family JW646_19330 PF03773 Predicted permease JW646_19345 PF04961 Formiminotransferase-cyclodeaminase JW646_19380 PF00689 Cation transporting ATPase, C-terminus JW646_19380 PF00690 Cation transporter/ATPase, N-terminus JW646_19390 PF01047 MarR family JW646_19395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JW646_19400 PF05067 Manganese containing catalase JW646_19405 PF00440 Bacterial regulatory proteins, tetR family JW646_19410 PF03033 Glycosyltransferase family 28 N-terminal domain JW646_19410 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JW646_19420 PF13520 Amino acid permease JW646_19455 PF00375 Sodium:dicarboxylate symporter family JW646_19465 PF05922 Peptidase inhibitor I9 JW646_19465 PF00082 Subtilase family JW646_19465 PF04151 Bacterial pre-peptidase C-terminal domain JW646_19470 PF16916 Dimerisation domain of Zinc Transporter JW646_19470 PF01545 Cation efflux family JW646_19485 PF00012 Hsp70 protein JW646_19490 PF01025 GrpE JW646_19495 PF00684 DnaJ central domain JW646_19495 PF01556 DnaJ C terminal domain JW646_19495 PF00226 DnaJ domain JW646_19520 PF01520 N-acetylmuramoyl-L-alanine amidase JW646_19530 PF13302 Acetyltransferase (GNAT) domain JW646_19535 PF00155 Aminotransferase class I and II JW646_19535 PF00392 Bacterial regulatory proteins, gntR family JW646_19540 PF02567 Phenazine biosynthesis-like protein JW646_19545 PF00999 Sodium/hydrogen exchanger family JW646_19545 PF00582 Universal stress protein family JW646_19555 PF13732 Domain of unknown function (DUF4162) JW646_19555 PF00005 ABC transporter JW646_19560 PF00561 alpha/beta hydrolase fold JW646_19585 PF00005 ABC transporter JW646_19590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_19595 PF00486 Transcriptional regulatory protein, C terminal JW646_19595 PF00072 Response regulator receiver domain JW646_19610 PF00005 ABC transporter JW646_19615 PF00392 Bacterial regulatory proteins, gntR family JW646_19630 PF08241 Methyltransferase domain JW646_19635 PF00004 ATPase family associated with various cellular activities (AAA) JW646_19635 PF17866 AAA lid domain JW646_19645 PF05738 Cna protein B-type domain JW646_19645 PF05737 Collagen binding domain JW646_19645 PF17802 Prealbumin-like fold domain JW646_19650 PF03471 Transporter associated domain JW646_19650 PF01595 Cyclin M transmembrane N-terminal domain JW646_19650 PF00571 CBS domain JW646_19655 PF02127 Aminopeptidase I zinc metalloprotease (M18) JW646_19660 PF01235 Sodium:alanine symporter family JW646_19680 PF00920 Dehydratase family JW646_19685 PF00392 Bacterial regulatory proteins, gntR family JW646_19685 PF07729 FCD domain JW646_19705 PF07503 HypF finger JW646_19705 PF01300 Telomere recombination JW646_19705 PF17788 HypF Kae1-like domain JW646_19705 PF00708 Acylphosphatase JW646_19710 PF00294 pfkB family carbohydrate kinase JW646_19715 PF04227 Indigoidine synthase A like protein JW646_19720 PF07683 Cobalamin synthesis protein cobW C-terminal domain JW646_19720 PF02492 CobW/HypB/UreG, nucleotide-binding domain JW646_19730 PF01872 RibD C-terminal domain JW646_19745 PF04055 Radical SAM superfamily JW646_19745 PF06968 Biotin and Thiamin Synthesis associated domain JW646_19750 PF02632 BioY family JW646_19755 PF04070 Domain of unknown function (DUF378) JW646_19760 PF02469 Fasciclin domain JW646_19765 PF00403 Heavy-metal-associated domain JW646_19770 PF02583 Metal-sensitive transcriptional repressor JW646_19780 PF00664 ABC transporter transmembrane region JW646_19780 PF00005 ABC transporter JW646_19785 PF00664 ABC transporter transmembrane region JW646_19785 PF00005 ABC transporter JW646_19795 PF01568 Molydopterin dinucleotide binding domain JW646_19795 PF00384 Molybdopterin oxidoreductase JW646_19795 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JW646_19805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JW646_19815 PF03551 Transcriptional regulator PadR-like family JW646_19825 PF04205 FMN-binding domain JW646_19825 PF01794 Ferric reductase like transmembrane component JW646_19830 PF00300 Histidine phosphatase superfamily (branch 1) JW646_19835 PF13545 Crp-like helix-turn-helix domain JW646_19840 PF09861 Lactate racemase N-terminal domain JW646_19845 PF00230 Major intrinsic protein JW646_19875 PF13419 Haloacid dehalogenase-like hydrolase JW646_19885 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW646_19885 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JW646_19890 PF01638 HxlR-like helix-turn-helix JW646_19900 PF07969 Amidohydrolase family JW646_19905 PF01523 Putative modulator of DNA gyrase JW646_19910 PF01523 Putative modulator of DNA gyrase JW646_19915 PF02525 Flavodoxin-like fold JW646_19935 PF01323 DSBA-like thioredoxin domain JW646_19940 PF00672 HAMP domain JW646_19940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW646_19940 PF00512 His Kinase A (phospho-acceptor) domain JW646_19940 PF13426 PAS domain JW646_19945 PF07943 Penicillin-binding protein 5, C-terminal domain JW646_19945 PF00768 D-alanyl-D-alanine carboxypeptidase JW646_19955 PF03880 DbpA RNA binding domain JW646_19955 PF00270 DEAD/DEAH box helicase JW646_19955 PF00271 Helicase conserved C-terminal domain JW646_19965 PF00962 Adenosine/AMP deaminase JW646_19980 PF00465 Iron-containing alcohol dehydrogenase JW646_20000 PF09338 Glycine/sarcosine/betaine reductase component B subunits JW646_20015 PF00266 Aminotransferase class-V JW646_20020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JW646_20020 PF03466 LysR substrate binding domain JW646_20025 PF00009 Elongation factor Tu GTP binding domain JW646_20025 PF03144 Elongation factor Tu domain 2 JW646_20025 PF09105 Elongation factor SelB, winged helix JW646_20025 PF09106 Elongation factor SelB, winged helix JW646_20025 PF09107 Elongation factor SelB, winged helix JW646_20030 PF12390 Selenocysteine synthase N terminal JW646_20030 PF03841 L-seryl-tRNA selenium transferase JW646_20050 PF18010 Cry35Ab1 HTH C-terminal domain JW646_20050 PF00239 Resolvase, N terminal domain JW646_20055 PF00313 'Cold-shock' DNA-binding domain JW646_20065 PF13662 Toprim domain JW646_20065 PF08278 DNA primase DnaG DnaB-binding JW646_20065 PF01807 CHC2 zinc finger JW646_20065 PF08275 DNA primase catalytic core, N-terminal domain JW646_20065 PF10410 DnaB-helicase binding domain of primase JW646_20080 PF09338 Glycine/sarcosine/betaine reductase component B subunits