RPIT_02550 c792a15fa8ef8e0094c4fe08f71f5353 397 SUPERFAMILY SSF55060 256 372 5.76E-16 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily RPIT_02550 c792a15fa8ef8e0094c4fe08f71f5353 397 Gene3D G3DSA:3.30.70.890 203 391 1.1E-16 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily RPIT_02550 c792a15fa8ef8e0094c4fe08f71f5353 397 PIRSF PIRSF000530 1 393 3.7E-39 T 13-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RPIT_02550 c792a15fa8ef8e0094c4fe08f71f5353 397 Pfam PF08544 GHMP kinases C terminal 290 369 2.9E-9 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain RPIT_02550 c792a15fa8ef8e0094c4fe08f71f5353 397 SUPERFAMILY SSF54211 2 132 5.01E-22 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RPIT_02550 c792a15fa8ef8e0094c4fe08f71f5353 397 Gene3D G3DSA:3.30.230.10 1 202 1.2E-34 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIT_02550 c792a15fa8ef8e0094c4fe08f71f5353 397 Pfam PF00288 GHMP kinases N terminal domain 92 128 7.4E-8 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 RPIT_02550 c792a15fa8ef8e0094c4fe08f71f5353 397 PRINTS PR00959 Mevalonate kinase family signature 96 118 1.0E-18 T 13-10-2018 RPIT_02550 c792a15fa8ef8e0094c4fe08f71f5353 397 PRINTS PR00959 Mevalonate kinase family signature 5 29 1.0E-18 T 13-10-2018 RPIT_02550 c792a15fa8ef8e0094c4fe08f71f5353 397 PRINTS PR00959 Mevalonate kinase family signature 338 355 1.0E-18 T 13-10-2018 RPIT_02550 c792a15fa8ef8e0094c4fe08f71f5353 397 PRINTS PR00473 Galactokinase signature 89 107 8.3E-8 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RPIT_02550 c792a15fa8ef8e0094c4fe08f71f5353 397 PRINTS PR00473 Galactokinase signature 7 25 8.3E-8 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RPIT_02550 c792a15fa8ef8e0094c4fe08f71f5353 397 PRINTS PR00473 Galactokinase signature 69 80 8.3E-8 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RPIT_02550 c792a15fa8ef8e0094c4fe08f71f5353 397 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 98 109 - T 13-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 RPIT_02550 c792a15fa8ef8e0094c4fe08f71f5353 397 Pfam PF10509 Galactokinase galactose-binding signature 3 34 2.4E-8 T 13-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RPIT_09190 d0769cabba57bedae80b3998da836c22 296 SUPERFAMILY SSF51569 2 291 6.49E-86 T 13-10-2018 RPIT_09190 d0769cabba57bedae80b3998da836c22 296 Gene3D G3DSA:3.20.20.70 1 292 8.2E-112 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_09190 d0769cabba57bedae80b3998da836c22 296 Pfam PF00274 Fructose-bisphosphate aldolase class-I 16 213 1.0E-8 T 13-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_01455 96261e2cf3ab574d874705400505af19 884 SUPERFAMILY SSF56712 4 589 5.89E-174 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain RPIT_01455 96261e2cf3ab574d874705400505af19 884 SMART SM00437 277 547 2.7E-112 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 RPIT_01455 96261e2cf3ab574d874705400505af19 884 Pfam PF01131 DNA topoisomerase 142 584 7.5E-118 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RPIT_01455 96261e2cf3ab574d874705400505af19 884 Hamap MF_00952 DNA topoisomerase 1 [topA]. 4 760 53.075 T 13-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 RPIT_01455 96261e2cf3ab574d874705400505af19 884 SMART SM00436 118 206 9.8E-47 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 RPIT_01455 96261e2cf3ab574d874705400505af19 884 Gene3D G3DSA:2.70.20.10 198 494 3.8E-164 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RPIT_01455 96261e2cf3ab574d874705400505af19 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 319 328 1.8E-33 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RPIT_01455 96261e2cf3ab574d874705400505af19 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 1.8E-33 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RPIT_01455 96261e2cf3ab574d874705400505af19 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 510 524 1.8E-33 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RPIT_01455 96261e2cf3ab574d874705400505af19 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 92 105 1.8E-33 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RPIT_01455 96261e2cf3ab574d874705400505af19 884 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 176 194 1.8E-33 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RPIT_01455 96261e2cf3ab574d874705400505af19 884 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 314 328 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 RPIT_01455 96261e2cf3ab574d874705400505af19 884 Pfam PF01751 Toprim domain 6 127 4.5E-27 T 13-10-2018 IPR006171 TOPRIM domain RPIT_01455 96261e2cf3ab574d874705400505af19 884 Pfam PF13368 Topoisomerase C-terminal repeat 805 857 7.2E-22 T 13-10-2018 IPR025589 Topoisomerase C-terminal repeat RPIT_01455 96261e2cf3ab574d874705400505af19 884 Pfam PF13368 Topoisomerase C-terminal repeat 678 736 1.3E-9 T 13-10-2018 IPR025589 Topoisomerase C-terminal repeat RPIT_01455 96261e2cf3ab574d874705400505af19 884 Pfam PF13368 Topoisomerase C-terminal repeat 623 667 3.8E-7 T 13-10-2018 IPR025589 Topoisomerase C-terminal repeat RPIT_01455 96261e2cf3ab574d874705400505af19 884 Pfam PF13368 Topoisomerase C-terminal repeat 742 793 9.5E-16 T 13-10-2018 IPR025589 Topoisomerase C-terminal repeat RPIT_01455 96261e2cf3ab574d874705400505af19 884 Gene3D G3DSA:1.10.290.10 285 411 3.8E-164 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 RPIT_01455 96261e2cf3ab574d874705400505af19 884 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 6 649 3.7E-233 T 13-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 RPIT_01455 96261e2cf3ab574d874705400505af19 884 Gene3D G3DSA:1.10.460.10 149 587 3.8E-164 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RPIT_01455 96261e2cf3ab574d874705400505af19 884 SMART SM00493 4 118 5.0E-36 T 13-10-2018 IPR006171 TOPRIM domain RPIT_01455 96261e2cf3ab574d874705400505af19 884 Gene3D G3DSA:3.40.50.140 3 148 4.0E-58 T 13-10-2018 RPIT_08985 8db24f7057c0e061d574ca4bee220b63 288 SUPERFAMILY SSF54637 2 127 2.77E-29 T 13-10-2018 IPR029069 HotDog domain superfamily RPIT_08985 8db24f7057c0e061d574ca4bee220b63 288 Gene3D G3DSA:3.10.129.10 1 132 5.5E-34 T 13-10-2018 RPIT_08985 8db24f7057c0e061d574ca4bee220b63 288 SUPERFAMILY SSF54637 149 281 3.42E-23 T 13-10-2018 IPR029069 HotDog domain superfamily RPIT_08985 8db24f7057c0e061d574ca4bee220b63 288 Pfam PF13279 Thioesterase-like superfamily 153 274 9.5E-10 T 13-10-2018 RPIT_08985 8db24f7057c0e061d574ca4bee220b63 288 Pfam PF13279 Thioesterase-like superfamily 9 119 1.0E-12 T 13-10-2018 RPIT_08985 8db24f7057c0e061d574ca4bee220b63 288 Gene3D G3DSA:3.10.129.10 139 279 1.1E-27 T 13-10-2018 RPIT_11400 9a59efe350ddc6c1c4dba0df7eb3d9d1 296 Gene3D G3DSA:1.10.3720.10 22 287 4.3E-61 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_11400 9a59efe350ddc6c1c4dba0df7eb3d9d1 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 286 4.3E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_11400 9a59efe350ddc6c1c4dba0df7eb3d9d1 296 SUPERFAMILY SSF161098 28 291 5.7E-67 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_12965 68aa7bb94818974475fe2151b6c2c8bf 450 Gene3D G3DSA:3.40.50.300 174 450 3.5E-99 T 13-10-2018 RPIT_12965 68aa7bb94818974475fe2151b6c2c8bf 450 Pfam PF00772 DnaB-like helicase N terminal domain 16 117 3.3E-32 T 13-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RPIT_12965 68aa7bb94818974475fe2151b6c2c8bf 450 SUPERFAMILY SSF52540 190 438 2.74E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_12965 68aa7bb94818974475fe2151b6c2c8bf 450 SUPERFAMILY SSF48024 14 125 9.81E-36 T 13-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 RPIT_12965 68aa7bb94818974475fe2151b6c2c8bf 450 Gene3D G3DSA:1.10.860.10 8 172 3.4E-57 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RPIT_12965 68aa7bb94818974475fe2151b6c2c8bf 450 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 16 448 1.1E-155 T 13-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 RPIT_12965 68aa7bb94818974475fe2151b6c2c8bf 450 SMART SM00382 208 405 8.6E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_12965 68aa7bb94818974475fe2151b6c2c8bf 450 Pfam PF03796 DnaB-like helicase C terminal domain 191 447 1.1E-98 T 13-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 RPIT_06260 d0ecb3d8e254831445b33b442c6c3204 597 SUPERFAMILY SSF55681 116 586 3.98E-102 T 13-10-2018 RPIT_06260 d0ecb3d8e254831445b33b442c6c3204 597 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 587 32.437 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 RPIT_06260 d0ecb3d8e254831445b33b442c6c3204 597 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 583 3.9E-208 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 RPIT_06260 d0ecb3d8e254831445b33b442c6c3204 597 Pfam PF02938 GAD domain 313 391 4.3E-13 T 13-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 RPIT_06260 d0ecb3d8e254831445b33b442c6c3204 597 SUPERFAMILY SSF55261 290 412 5.07E-34 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 RPIT_06260 d0ecb3d8e254831445b33b442c6c3204 597 Gene3D G3DSA:3.30.930.10 118 583 3.1E-181 T 13-10-2018 RPIT_06260 d0ecb3d8e254831445b33b442c6c3204 597 Gene3D G3DSA:3.30.1360.30 273 412 3.1E-181 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 RPIT_06260 d0ecb3d8e254831445b33b442c6c3204 597 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 9.0E-27 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_06260 d0ecb3d8e254831445b33b442c6c3204 597 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 9.0E-27 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_06260 d0ecb3d8e254831445b33b442c6c3204 597 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 9.0E-27 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_06260 d0ecb3d8e254831445b33b442c6c3204 597 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 9.0E-27 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_06260 d0ecb3d8e254831445b33b442c6c3204 597 Pfam PF01336 OB-fold nucleic acid binding domain 19 102 1.1E-15 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RPIT_06260 d0ecb3d8e254831445b33b442c6c3204 597 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 560 1.1E-102 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_06260 d0ecb3d8e254831445b33b442c6c3204 597 SUPERFAMILY SSF50249 3 105 9.79E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_06260 d0ecb3d8e254831445b33b442c6c3204 597 Gene3D G3DSA:2.40.50.140 1 105 2.4E-33 T 13-10-2018 RPIT_09505 d6e5537fceff50df8945dec86d8fc67d 279 Gene3D G3DSA:3.40.50.1860 99 210 5.5E-92 T 13-10-2018 RPIT_09505 d6e5537fceff50df8945dec86d8fc67d 279 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 13-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RPIT_09505 d6e5537fceff50df8945dec86d8fc67d 279 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 183 193 - T 13-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RPIT_09505 d6e5537fceff50df8945dec86d8fc67d 279 SUPERFAMILY SSF53681 113 258 1.28E-35 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RPIT_09505 d6e5537fceff50df8945dec86d8fc67d 279 Gene3D G3DSA:3.40.50.1860 9 257 5.5E-92 T 13-10-2018 RPIT_09505 d6e5537fceff50df8945dec86d8fc67d 279 Pfam PF01177 Asp/Glu/Hydantoin racemase 10 218 6.5E-35 T 13-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RPIT_09505 d6e5537fceff50df8945dec86d8fc67d 279 TIGRFAM TIGR00067 glut_race: glutamate racemase 10 250 5.5E-68 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RPIT_09505 d6e5537fceff50df8945dec86d8fc67d 279 SUPERFAMILY SSF53681 9 111 1.44E-33 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RPIT_09505 d6e5537fceff50df8945dec86d8fc67d 279 Hamap MF_00258 Glutamate racemase [murI]. 8 259 36.01 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RPIT_11750 c585bcaecce766a95bdc704bc2c3192f 300 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 43 291 9.3E-56 T 13-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 RPIT_11750 c585bcaecce766a95bdc704bc2c3192f 300 SUPERFAMILY SSF53850 40 297 2.92E-66 T 13-10-2018 RPIT_11750 c585bcaecce766a95bdc704bc2c3192f 300 Gene3D G3DSA:3.40.190.10 46 297 8.5E-81 T 13-10-2018 RPIT_11750 c585bcaecce766a95bdc704bc2c3192f 300 Gene3D G3DSA:3.40.190.100 126 234 8.5E-81 T 13-10-2018 RPIT_10080 4d43943d3508d8da0bf5251c7650c731 116 Gene3D G3DSA:3.90.470.20 1 116 2.3E-30 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 RPIT_10080 4d43943d3508d8da0bf5251c7650c731 116 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 115 3.0E-6 T 13-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 RPIT_10080 4d43943d3508d8da0bf5251c7650c731 116 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 116 1.7E-19 T 13-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 RPIT_10080 4d43943d3508d8da0bf5251c7650c731 116 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 116 20.308 T 13-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 RPIT_10080 4d43943d3508d8da0bf5251c7650c731 116 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 115 6.7E-22 T 13-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 RPIT_10080 4d43943d3508d8da0bf5251c7650c731 116 SUPERFAMILY SSF56214 1 115 6.28E-24 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 RPIT_10080 4d43943d3508d8da0bf5251c7650c731 116 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 105 3.8E-11 T 13-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 RPIT_10535 f5c112739dcd5812ed61165f4a2ff226 266 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 34 265 1.6E-62 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RPIT_10535 f5c112739dcd5812ed61165f4a2ff226 266 Gene3D G3DSA:3.40.1180.10 19 266 7.4E-82 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 RPIT_10535 f5c112739dcd5812ed61165f4a2ff226 266 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 211 228 - T 13-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 RPIT_10535 f5c112739dcd5812ed61165f4a2ff226 266 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 34 266 35.971 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RPIT_10535 f5c112739dcd5812ed61165f4a2ff226 266 SUPERFAMILY SSF64005 29 260 3.14E-67 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 RPIT_10535 f5c112739dcd5812ed61165f4a2ff226 266 Pfam PF01255 Putative undecaprenyl diphosphate synthase 42 265 2.1E-67 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RPIT_06190 9e211534f91cfec2fca7ff3301c47bb3 141 Pfam PF01029 NusB family 12 133 6.3E-28 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RPIT_06190 9e211534f91cfec2fca7ff3301c47bb3 141 Gene3D G3DSA:1.10.940.10 4 133 5.7E-33 T 13-10-2018 IPR035926 NusB-like superfamily RPIT_06190 9e211534f91cfec2fca7ff3301c47bb3 141 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 138 18.481 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 RPIT_06190 9e211534f91cfec2fca7ff3301c47bb3 141 SUPERFAMILY SSF48013 8 134 1.24E-29 T 13-10-2018 IPR035926 NusB-like superfamily RPIT_06190 9e211534f91cfec2fca7ff3301c47bb3 141 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 133 1.2E-31 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 RPIT_05480 3b2d49406561938deecb911a5aec6b30 564 Pfam PF02652 L-lactate permease 18 551 1.9E-119 T 13-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RPIT_05480 3b2d49406561938deecb911a5aec6b30 564 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 16 552 1.6E-119 T 13-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RPIT_10225 9eba7a2f6fb4bbad1ece16739f05eb93 646 Pfam PF00005 ABC transporter 424 574 7.0E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_10225 9eba7a2f6fb4bbad1ece16739f05eb93 646 SMART SM00382 433 620 9.6E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_10225 9eba7a2f6fb4bbad1ece16739f05eb93 646 Gene3D G3DSA:1.20.1560.10 66 397 5.0E-54 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_10225 9eba7a2f6fb4bbad1ece16739f05eb93 646 Gene3D G3DSA:3.40.50.300 404 644 1.9E-69 T 13-10-2018 RPIT_10225 9eba7a2f6fb4bbad1ece16739f05eb93 646 SUPERFAMILY SSF90123 83 398 2.35E-57 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_10225 9eba7a2f6fb4bbad1ece16739f05eb93 646 SUPERFAMILY SSF52540 407 643 4.05E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10225 9eba7a2f6fb4bbad1ece16739f05eb93 646 Pfam PF00664 ABC transporter transmembrane region 97 366 1.6E-31 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 RPIT_10255 668fcf9b170fe4a6157d997b9bfcf83e 366 TIGRFAM TIGR03539 DapC_actino: succinyldiaminopimelate transaminase 7 361 2.0E-172 T 13-10-2018 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ RPIT_10255 668fcf9b170fe4a6157d997b9bfcf83e 366 SUPERFAMILY SSF53383 7 364 1.77E-74 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_10255 668fcf9b170fe4a6157d997b9bfcf83e 366 Gene3D G3DSA:3.40.640.10 41 268 4.5E-80 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_10255 668fcf9b170fe4a6157d997b9bfcf83e 366 Gene3D G3DSA:3.90.1150.10 14 354 4.5E-80 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_10255 668fcf9b170fe4a6157d997b9bfcf83e 366 Pfam PF00155 Aminotransferase class I and II 29 361 1.1E-42 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIT_10255 668fcf9b170fe4a6157d997b9bfcf83e 366 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 219 232 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 RPIT_14335 da3e97fc6e14bdda9343ad3eab6f4f2f 187 SUPERFAMILY SSF88946 9 108 2.88E-20 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_14335 da3e97fc6e14bdda9343ad3eab6f4f2f 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 50 82 - T 13-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIT_14335 da3e97fc6e14bdda9343ad3eab6f4f2f 187 Pfam PF08281 Sigma-70, region 4 126 176 2.1E-12 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIT_14335 da3e97fc6e14bdda9343ad3eab6f4f2f 187 Pfam PF04542 Sigma-70 region 2 29 96 1.1E-14 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_14335 da3e97fc6e14bdda9343ad3eab6f4f2f 187 Gene3D G3DSA:1.10.10.10 93 182 1.6E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_14335 da3e97fc6e14bdda9343ad3eab6f4f2f 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 178 5.5E-22 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 RPIT_14335 da3e97fc6e14bdda9343ad3eab6f4f2f 187 SUPERFAMILY SSF88659 120 181 6.35E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like RPIT_14335 da3e97fc6e14bdda9343ad3eab6f4f2f 187 Gene3D G3DSA:1.10.1740.10 11 92 3.8E-20 T 13-10-2018 RPIT_00025 55ca1b46cf570bdd4932edc96bf5e7e2 226 Pfam PF01903 CbiX 12 84 4.3E-11 T 13-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 RPIT_00025 55ca1b46cf570bdd4932edc96bf5e7e2 226 Pfam PF01903 CbiX 123 213 5.2E-7 T 13-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 RPIT_00025 55ca1b46cf570bdd4932edc96bf5e7e2 226 Gene3D G3DSA:3.40.50.1400 114 222 1.3E-14 T 13-10-2018 RPIT_00025 55ca1b46cf570bdd4932edc96bf5e7e2 226 Gene3D G3DSA:3.40.50.1400 5 111 5.5E-16 T 13-10-2018 RPIT_00025 55ca1b46cf570bdd4932edc96bf5e7e2 226 SUPERFAMILY SSF53800 7 219 3.79E-22 T 13-10-2018 RPIT_05695 d6e4863e90b442c7ad180e3f7bf693fd 178 Pfam PF01230 HIT domain 52 144 5.8E-15 T 13-10-2018 IPR001310 Histidine triad (HIT) protein RPIT_05695 d6e4863e90b442c7ad180e3f7bf693fd 178 Gene3D G3DSA:3.30.428.10 7 177 9.7E-56 T 13-10-2018 IPR036265 HIT-like superfamily RPIT_05695 d6e4863e90b442c7ad180e3f7bf693fd 178 SUPERFAMILY SSF54197 18 175 2.69E-42 T 13-10-2018 IPR036265 HIT-like superfamily RPIT_08970 6c541ea5ee9960163e1f8bfe8cdaddb8 322 Pfam PF13377 Periplasmic binding protein-like domain 167 318 3.3E-25 T 13-10-2018 RPIT_08970 6c541ea5ee9960163e1f8bfe8cdaddb8 322 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 45 2.9E-18 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_08970 6c541ea5ee9960163e1f8bfe8cdaddb8 322 ProSitePatterns PS00356 LacI-type HTH domain signature. 1 19 - T 13-10-2018 RPIT_08970 6c541ea5ee9960163e1f8bfe8cdaddb8 322 SUPERFAMILY SSF53822 56 307 7.85E-52 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_08970 6c541ea5ee9960163e1f8bfe8cdaddb8 322 Gene3D G3DSA:3.40.50.2300 158 280 1.7E-63 T 13-10-2018 RPIT_08970 6c541ea5ee9960163e1f8bfe8cdaddb8 322 SUPERFAMILY SSF47413 1 56 7.74E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_08970 6c541ea5ee9960163e1f8bfe8cdaddb8 322 Gene3D G3DSA:1.10.260.40 1 55 1.9E-21 T 13-10-2018 RPIT_08970 6c541ea5ee9960163e1f8bfe8cdaddb8 322 SMART SM00354 1 68 2.4E-23 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_08970 6c541ea5ee9960163e1f8bfe8cdaddb8 322 Gene3D G3DSA:3.40.50.2300 74 310 1.7E-63 T 13-10-2018 RPIT_01575 1e4144981ae5a6800c9c788ca17bda9c 261 Gene3D G3DSA:3.20.20.20 1 260 1.3E-105 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_01575 1e4144981ae5a6800c9c788ca17bda9c 261 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 34 47 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_01575 1e4144981ae5a6800c9c788ca17bda9c 261 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 1 254 1.5E-93 T 13-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 RPIT_01575 1e4144981ae5a6800c9c788ca17bda9c 261 Pfam PF00809 Pterin binding enzyme 1 241 5.8E-88 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_01575 1e4144981ae5a6800c9c788ca17bda9c 261 SUPERFAMILY SSF51717 1 256 3.27E-91 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_08010 b6865eaff87ecf090fd1aa02756ecaa2 312 Pfam PF13280 WYL domain 144 301 1.1E-23 T 13-10-2018 IPR026881 WYL domain RPIT_08010 b6865eaff87ecf090fd1aa02756ecaa2 312 PIRSF PIRSF016838 1 309 1.6E-78 T 13-10-2018 IPR028349 Protein PafC RPIT_04165 19faacdd91e1fff07e89e90dfb260ebf 938 SMART SM00382 631 920 0.0023 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_04165 19faacdd91e1fff07e89e90dfb260ebf 938 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 938 22.241 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 RPIT_04165 19faacdd91e1fff07e89e90dfb260ebf 938 Pfam PF00005 ABC transporter 622 858 1.4E-11 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_04165 19faacdd91e1fff07e89e90dfb260ebf 938 Gene3D G3DSA:3.40.50.300 1 595 4.0E-247 T 13-10-2018 RPIT_04165 19faacdd91e1fff07e89e90dfb260ebf 938 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 1 923 0.0 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 RPIT_04165 19faacdd91e1fff07e89e90dfb260ebf 938 Gene3D G3DSA:1.20.1580.10 690 828 2.6E-144 T 13-10-2018 RPIT_04165 19faacdd91e1fff07e89e90dfb260ebf 938 SUPERFAMILY SSF52540 615 912 7.69E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04165 19faacdd91e1fff07e89e90dfb260ebf 938 Gene3D G3DSA:1.20.1580.10 85 492 4.0E-247 T 13-10-2018 RPIT_04165 19faacdd91e1fff07e89e90dfb260ebf 938 Gene3D G3DSA:3.40.50.300 615 934 2.6E-144 T 13-10-2018 RPIT_04165 19faacdd91e1fff07e89e90dfb260ebf 938 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_04165 19faacdd91e1fff07e89e90dfb260ebf 938 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_04165 19faacdd91e1fff07e89e90dfb260ebf 938 Gene3D G3DSA:1.10.8.280 286 403 4.0E-247 T 13-10-2018 RPIT_04165 19faacdd91e1fff07e89e90dfb260ebf 938 SUPERFAMILY SSF52540 3 569 3.5E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04165 19faacdd91e1fff07e89e90dfb260ebf 938 Gene3D G3DSA:3.30.190.20 125 242 4.0E-247 T 13-10-2018 RPIT_12210 7976eabeda29bc9f5c0c90acccae01d3 386 Gene3D G3DSA:1.10.10.10 89 166 7.7E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_12210 7976eabeda29bc9f5c0c90acccae01d3 386 SUPERFAMILY SSF53335 187 374 1.02E-26 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_12210 7976eabeda29bc9f5c0c90acccae01d3 386 SUPERFAMILY SSF46785 2 81 2.31E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_12210 7976eabeda29bc9f5c0c90acccae01d3 386 Pfam PF13649 Methyltransferase domain 230 320 1.3E-12 T 13-10-2018 RPIT_12210 7976eabeda29bc9f5c0c90acccae01d3 386 Gene3D G3DSA:1.10.10.10 1 87 4.1E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_12210 7976eabeda29bc9f5c0c90acccae01d3 386 SUPERFAMILY SSF46785 85 162 1.31E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_12210 7976eabeda29bc9f5c0c90acccae01d3 386 Pfam PF04337 Protein of unknown function, DUF480 2 151 5.6E-56 T 13-10-2018 IPR007432 Protein of unknown function DUF480 RPIT_12210 7976eabeda29bc9f5c0c90acccae01d3 386 Gene3D G3DSA:3.40.50.150 186 378 6.3E-34 T 13-10-2018 RPIT_12210 7976eabeda29bc9f5c0c90acccae01d3 386 Hamap MF_01584 UPF0502 protein YceH [yceH]. 2 285 27.778 T 13-10-2018 IPR007432 Protein of unknown function DUF480 RPIT_12220 7d1ea027c34a17bf5c69b4c108e512eb 461 Gene3D G3DSA:3.40.190.10 174 423 4.8E-34 T 13-10-2018 RPIT_12220 7d1ea027c34a17bf5c69b4c108e512eb 461 Gene3D G3DSA:3.40.190.10 89 407 4.8E-34 T 13-10-2018 RPIT_12220 7d1ea027c34a17bf5c69b4c108e512eb 461 SUPERFAMILY SSF53850 62 446 1.51E-27 T 13-10-2018 RPIT_12220 7d1ea027c34a17bf5c69b4c108e512eb 461 Pfam PF01547 Bacterial extracellular solute-binding protein 96 366 1.9E-13 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein RPIT_12220 7d1ea027c34a17bf5c69b4c108e512eb 461 TIGRFAM TIGR03851 chitin_NgcE: carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein 17 457 5.1E-130 T 13-10-2018 IPR022386 Carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein RPIT_06045 613f2e12b8d43b18c98d218ed6756f2f 161 SUPERFAMILY SSF88697 37 159 2.49E-26 T 13-10-2018 IPR015947 PUA-like superfamily RPIT_06045 613f2e12b8d43b18c98d218ed6756f2f 161 Gene3D G3DSA:3.10.400.10 22 160 1.3E-32 T 13-10-2018 RPIT_06045 613f2e12b8d43b18c98d218ed6756f2f 161 Pfam PF04266 ASCH domain 44 157 1.3E-12 T 13-10-2018 IPR007374 ASCH domain RPIT_06045 613f2e12b8d43b18c98d218ed6756f2f 161 SMART SM01022 39 157 2.9E-15 T 13-10-2018 IPR007374 ASCH domain RPIT_09695 cfbee74db6c83016d06f853e3c7ccf8b 559 Gene3D G3DSA:3.40.50.12780 20 434 6.4E-101 T 13-10-2018 RPIT_09695 cfbee74db6c83016d06f853e3c7ccf8b 559 Pfam PF13193 AMP-binding enzyme C-terminal domain 450 527 2.0E-18 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain RPIT_09695 cfbee74db6c83016d06f853e3c7ccf8b 559 Gene3D G3DSA:3.30.300.310 437 542 6.1E-22 T 13-10-2018 RPIT_09695 cfbee74db6c83016d06f853e3c7ccf8b 559 SUPERFAMILY SSF56801 34 540 6.93E-119 T 13-10-2018 RPIT_09695 cfbee74db6c83016d06f853e3c7ccf8b 559 Pfam PF00501 AMP-binding enzyme 60 441 2.5E-68 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 RPIT_13240 68291edcfdf1a53757787db718289492 523 Gene3D G3DSA:3.30.70.1450 256 333 1.7E-7 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 RPIT_13240 68291edcfdf1a53757787db718289492 523 Pfam PF06826 Predicted Permease Membrane Region 352 520 6.7E-28 T 13-10-2018 IPR006512 YidE/YbjL duplication RPIT_13240 68291edcfdf1a53757787db718289492 523 Pfam PF06826 Predicted Permease Membrane Region 13 167 3.5E-27 T 13-10-2018 IPR006512 YidE/YbjL duplication RPIT_13240 68291edcfdf1a53757787db718289492 523 Pfam PF02080 TrkA-C domain 270 332 1.3E-9 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RPIT_13240 68291edcfdf1a53757787db718289492 523 SUPERFAMILY SSF116726 266 338 6.15E-9 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 RPIT_13240 68291edcfdf1a53757787db718289492 523 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 356 505 1.0E-30 T 13-10-2018 IPR006512 YidE/YbjL duplication RPIT_11240 6956db837b120fff01c74595f1d4bafd 385 PIRSF PIRSF001434 1 385 3.7E-127 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RPIT_11240 6956db837b120fff01c74595f1d4bafd 385 SUPERFAMILY SSF53383 13 383 9.99E-110 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_11240 6956db837b120fff01c74595f1d4bafd 385 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 9 382 5.3E-160 T 13-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 RPIT_11240 6956db837b120fff01c74595f1d4bafd 385 Gene3D G3DSA:3.90.1150.10 251 385 4.9E-48 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_11240 6956db837b120fff01c74595f1d4bafd 385 Gene3D G3DSA:3.40.640.10 7 248 1.2E-76 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_11240 6956db837b120fff01c74595f1d4bafd 385 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RPIT_11240 6956db837b120fff01c74595f1d4bafd 385 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 11 381 1.5E-123 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RPIT_11195 343353d45912a77a06983f6f753f5f7c 326 Gene3D G3DSA:3.40.50.620 15 206 1.7E-70 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_11195 343353d45912a77a06983f6f753f5f7c 326 SUPERFAMILY SSF52402 15 219 1.05E-53 T 13-10-2018 RPIT_11195 343353d45912a77a06983f6f753f5f7c 326 SUPERFAMILY SSF54810 206 326 7.06E-42 T 13-10-2018 RPIT_11195 343353d45912a77a06983f6f753f5f7c 326 Pfam PF00733 Asparagine synthase 19 63 1.4E-4 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 RPIT_11195 343353d45912a77a06983f6f753f5f7c 326 Pfam PF00958 GMP synthase C terminal domain 234 325 7.5E-35 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RPIT_11195 343353d45912a77a06983f6f753f5f7c 326 Gene3D G3DSA:3.30.300.10 207 326 1.0E-43 T 13-10-2018 RPIT_11195 343353d45912a77a06983f6f753f5f7c 326 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 19 326 7.3E-139 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RPIT_03555 1a22b5919fd05a26f0cfd418e0f061c7 585 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_03555 1a22b5919fd05a26f0cfd418e0f061c7 585 Gene3D G3DSA:3.40.50.300 2 235 4.2E-55 T 13-10-2018 RPIT_03555 1a22b5919fd05a26f0cfd418e0f061c7 585 Gene3D G3DSA:3.40.50.300 262 508 4.2E-54 T 13-10-2018 RPIT_03555 1a22b5919fd05a26f0cfd418e0f061c7 585 Pfam PF00005 ABC transporter 20 151 5.0E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_03555 1a22b5919fd05a26f0cfd418e0f061c7 585 SUPERFAMILY SSF52540 5 203 8.34E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_03555 1a22b5919fd05a26f0cfd418e0f061c7 585 Pfam PF12848 ABC transporter 193 260 1.7E-5 T 13-10-2018 IPR032781 ABC-transporter extension domain RPIT_03555 1a22b5919fd05a26f0cfd418e0f061c7 585 ProSitePatterns PS00211 ABC transporters family signature. 408 422 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_03555 1a22b5919fd05a26f0cfd418e0f061c7 585 Pfam PF00005 ABC transporter 301 436 2.4E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_03555 1a22b5919fd05a26f0cfd418e0f061c7 585 SUPERFAMILY SSF52540 276 496 5.02E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_03555 1a22b5919fd05a26f0cfd418e0f061c7 585 SMART SM00382 310 480 7.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_03555 1a22b5919fd05a26f0cfd418e0f061c7 585 SMART SM00382 29 206 1.3E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_06855 407d02e8e106d8414021eda0256ba7ad 500 PIRSF PIRSF002741 2 496 2.1E-85 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RPIT_06855 407d02e8e106d8414021eda0256ba7ad 500 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 407 3.6E-79 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain RPIT_06855 407d02e8e106d8414021eda0256ba7ad 500 Gene3D G3DSA:3.10.105.10 273 467 2.6E-49 T 13-10-2018 RPIT_06855 407d02e8e106d8414021eda0256ba7ad 500 Gene3D G3DSA:3.40.190.10 17 272 2.2E-55 T 13-10-2018 RPIT_06855 407d02e8e106d8414021eda0256ba7ad 500 SUPERFAMILY SSF53850 36 492 3.72E-114 T 13-10-2018 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 322 3.2E-49 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 SUPERFAMILY SSF55424 341 457 1.41E-30 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 2.9E-52 T 13-10-2018 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 420 2.9E-52 T 13-10-2018 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.9E-52 T 13-10-2018 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 2.9E-52 T 13-10-2018 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 340 361 2.9E-52 T 13-10-2018 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 36 51 2.9E-52 T 13-10-2018 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 171 196 2.9E-52 T 13-10-2018 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 133 142 2.9E-52 T 13-10-2018 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 Gene3D G3DSA:3.30.390.30 343 464 1.1E-32 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 130 148 3.0E-28 T 13-10-2018 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 3.0E-28 T 13-10-2018 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 3.0E-28 T 13-10-2018 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 3.0E-28 T 13-10-2018 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.0E-28 T 13-10-2018 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 37 47 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 SUPERFAMILY SSF51905 1 369 1.39E-47 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 PIRSF PIRSF000350 1 443 1.3E-68 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 Gene3D G3DSA:3.50.50.60 142 266 7.0E-90 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 453 3.1E-24 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIT_01740 77d2efc5af7617626736aa9f83a14538 468 Gene3D G3DSA:3.50.50.60 4 328 7.0E-90 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_07075 b5f2c58b8baaf3d292e664301dbf9eea 535 SUPERFAMILY SSF54791 223 313 1.48E-14 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 RPIT_07075 b5f2c58b8baaf3d292e664301dbf9eea 535 SMART SM00322 223 290 6.4E-6 T 13-10-2018 IPR004087 K Homology domain GO:0003676 RPIT_07075 b5f2c58b8baaf3d292e664301dbf9eea 535 Pfam PF01966 HD domain 352 442 5.7E-16 T 13-10-2018 IPR006674 HD domain RPIT_07075 b5f2c58b8baaf3d292e664301dbf9eea 535 Pfam PF00013 KH domain 228 267 1.1E-6 T 13-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 RPIT_07075 b5f2c58b8baaf3d292e664301dbf9eea 535 SUPERFAMILY SSF109604 342 463 1.26E-25 T 13-10-2018 RPIT_07075 b5f2c58b8baaf3d292e664301dbf9eea 535 Hamap MF_00335 Ribonuclease Y [rny]. 7 535 23.049 T 13-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 RPIT_07075 b5f2c58b8baaf3d292e664301dbf9eea 535 SMART SM00471 347 453 1.4E-8 T 13-10-2018 IPR003607 HD/PDEase domain RPIT_07075 b5f2c58b8baaf3d292e664301dbf9eea 535 Pfam PF12072 Domain of unknown function (DUF3552) 49 219 8.3E-17 T 13-10-2018 IPR022711 Ribonuclease Y, N-terminal RPIT_07075 b5f2c58b8baaf3d292e664301dbf9eea 535 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 45 534 1.2E-183 T 13-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 RPIT_07075 b5f2c58b8baaf3d292e664301dbf9eea 535 Gene3D G3DSA:3.30.1370.10 207 318 8.9E-7 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 RPIT_07075 b5f2c58b8baaf3d292e664301dbf9eea 535 Gene3D G3DSA:1.10.3210.10 336 488 1.2E-15 T 13-10-2018 RPIT_07075 b5f2c58b8baaf3d292e664301dbf9eea 535 TIGRFAM TIGR00277 HDIG: HDIG domain 347 424 1.1E-19 T 13-10-2018 IPR006675 HDIG domain RPIT_07140 885cc3fb25a7ef31197c2337352b2b05 306 PIRSF PIRSF028754 10 306 4.5E-83 T 13-10-2018 IPR008492 Protein of unknown function DUF774 RPIT_07140 885cc3fb25a7ef31197c2337352b2b05 306 Gene3D G3DSA:1.10.287.100 225 263 8.9E-80 T 13-10-2018 RPIT_07140 885cc3fb25a7ef31197c2337352b2b05 306 SUPERFAMILY SSF159659 7 267 9.15E-78 T 13-10-2018 RPIT_07140 885cc3fb25a7ef31197c2337352b2b05 306 Pfam PF09754 PAC2 family 29 240 3.0E-38 T 13-10-2018 IPR019151 Proteasome assembly chaperone 2 RPIT_07140 885cc3fb25a7ef31197c2337352b2b05 306 Gene3D G3DSA:3.40.50.10900 21 224 8.9E-80 T 13-10-2018 IPR038389 Proteasome assembly chaperone 2 superfamily RPIT_05185 981bf6da1990426b745225800c12e91f 606 SUPERFAMILY SSF69304 70 326 5.62E-10 T 13-10-2018 RPIT_05185 981bf6da1990426b745225800c12e91f 606 Gene3D G3DSA:3.40.50.1820 340 600 5.9E-73 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_05185 981bf6da1990426b745225800c12e91f 606 SUPERFAMILY SSF53474 354 589 9.28E-60 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_05185 981bf6da1990426b745225800c12e91f 606 Pfam PF00326 Prolyl oligopeptidase family 386 590 2.9E-42 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RPIT_03005 6cae51eee8328c73a2efaf07df4a23c4 318 SUPERFAMILY SSF52833 37 105 6.49E-5 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_03005 6cae51eee8328c73a2efaf07df4a23c4 318 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 148 1.0E-10 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIT_03005 6cae51eee8328c73a2efaf07df4a23c4 318 Gene3D G3DSA:3.40.30.130 2 171 8.9E-53 T 13-10-2018 RPIT_03005 6cae51eee8328c73a2efaf07df4a23c4 318 PIRSF PIRSF015753 5 317 1.6E-107 T 13-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 RPIT_03005 6cae51eee8328c73a2efaf07df4a23c4 318 Gene3D G3DSA:1.20.1050.10 172 318 1.8E-68 T 13-10-2018 RPIT_03005 6cae51eee8328c73a2efaf07df4a23c4 318 SUPERFAMILY SSF47616 174 313 1.11E-31 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily RPIT_03005 6cae51eee8328c73a2efaf07df4a23c4 318 Pfam PF13410 Glutathione S-transferase, C-terminal domain 197 266 2.3E-12 T 13-10-2018 RPIT_13495 2432a6a6bc03e8aa1ffe9ba96a705056 495 Pfam PF07732 Multicopper oxidase 73 176 4.6E-26 T 13-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 RPIT_13495 2432a6a6bc03e8aa1ffe9ba96a705056 495 ProSitePatterns PS00079 Multicopper oxidases signature 1. 472 492 - T 13-10-2018 IPR033138 Multicopper oxidases, conserved site RPIT_13495 2432a6a6bc03e8aa1ffe9ba96a705056 495 Gene3D G3DSA:2.60.40.420 180 373 9.7E-33 T 13-10-2018 IPR008972 Cupredoxin RPIT_13495 2432a6a6bc03e8aa1ffe9ba96a705056 495 SUPERFAMILY SSF49503 374 492 8.86E-32 T 13-10-2018 IPR008972 Cupredoxin RPIT_13495 2432a6a6bc03e8aa1ffe9ba96a705056 495 SUPERFAMILY SSF49503 178 357 2.54E-33 T 13-10-2018 IPR008972 Cupredoxin RPIT_13495 2432a6a6bc03e8aa1ffe9ba96a705056 495 ProSitePatterns PS00080 Multicopper oxidases signature 2. 477 488 - T 13-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 RPIT_13495 2432a6a6bc03e8aa1ffe9ba96a705056 495 Pfam PF00394 Multicopper oxidase 243 344 8.5E-23 T 13-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 RPIT_13495 2432a6a6bc03e8aa1ffe9ba96a705056 495 Pfam PF07731 Multicopper oxidase 391 493 3.5E-23 T 13-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 RPIT_13495 2432a6a6bc03e8aa1ffe9ba96a705056 495 Gene3D G3DSA:2.60.40.420 47 175 4.0E-31 T 13-10-2018 IPR008972 Cupredoxin RPIT_13495 2432a6a6bc03e8aa1ffe9ba96a705056 495 SUPERFAMILY SSF49503 58 193 1.09E-30 T 13-10-2018 IPR008972 Cupredoxin RPIT_13495 2432a6a6bc03e8aa1ffe9ba96a705056 495 Gene3D G3DSA:2.60.40.420 374 495 2.3E-30 T 13-10-2018 IPR008972 Cupredoxin RPIT_10325 59679c2a3525942419a471f0ff845360 142 SUPERFAMILY SSF54631 1 140 7.33E-29 T 13-10-2018 RPIT_10325 59679c2a3525942419a471f0ff845360 142 Gene3D G3DSA:3.10.580.10 1 142 1.1E-40 T 13-10-2018 RPIT_10325 59679c2a3525942419a471f0ff845360 142 SMART SM00116 79 126 7.0E-5 T 13-10-2018 IPR000644 CBS domain RPIT_10325 59679c2a3525942419a471f0ff845360 142 SMART SM00116 13 61 7.6E-4 T 13-10-2018 IPR000644 CBS domain RPIT_10325 59679c2a3525942419a471f0ff845360 142 Pfam PF00571 CBS domain 72 123 7.2E-10 T 13-10-2018 IPR000644 CBS domain RPIT_10325 59679c2a3525942419a471f0ff845360 142 Pfam PF00571 CBS domain 14 60 6.9E-7 T 13-10-2018 IPR000644 CBS domain RPIT_04185 1527cbc16f0b5c20da4660eb69307b49 231 SUPERFAMILY SSF52540 21 217 1.52E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04185 1527cbc16f0b5c20da4660eb69307b49 231 Gene3D G3DSA:3.40.50.300 1 230 4.5E-56 T 13-10-2018 RPIT_04185 1527cbc16f0b5c20da4660eb69307b49 231 SMART SM00382 32 212 1.5E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_04185 1527cbc16f0b5c20da4660eb69307b49 231 Pfam PF00005 ABC transporter 25 167 5.6E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 165 2.6E-32 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 Gene3D G3DSA:3.30.70.240 591 661 2.1E-88 T 13-10-2018 RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 Pfam PF14492 Elongation Factor G, domain II 390 464 4.5E-35 T 13-10-2018 RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 Gene3D G3DSA:3.30.230.10 470 674 2.1E-88 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 678 0.0 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 SMART SM00838 587 674 1.3E-51 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 Pfam PF00679 Elongation factor G C-terminus 588 673 2.0E-29 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 SUPERFAMILY SSF50447 250 390 2.24E-37 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 Pfam PF00009 Elongation factor Tu GTP binding domain 1 266 8.2E-63 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 PRINTS PR00315 GTP-binding elongation factor signature 43 51 7.5E-9 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 PRINTS PR00315 GTP-binding elongation factor signature 79 90 7.5E-9 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 PRINTS PR00315 GTP-binding elongation factor signature 63 73 7.5E-9 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 PRINTS PR00315 GTP-binding elongation factor signature 115 124 7.5E-9 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 Hamap MF_00054_B Elongation factor G [fusA]. 1 678 110.774 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 Pfam PF03764 Elongation factor G, domain IV 465 584 8.1E-50 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 Pfam PF03144 Elongation factor Tu domain 2 310 377 1.5E-16 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 SUPERFAMILY SSF54211 465 586 1.11E-43 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 SUPERFAMILY SSF54980 590 677 1.15E-29 T 13-10-2018 IPR035647 EF-G domain III/V-like RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 SUPERFAMILY SSF52540 1 266 7.88E-101 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 Gene3D G3DSA:3.30.70.870 391 469 8.5E-33 T 13-10-2018 RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 Gene3D G3DSA:3.40.50.300 1 272 3.2E-106 T 13-10-2018 RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 SMART SM00889 466 585 9.3E-75 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 36 51 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 SUPERFAMILY SSF54980 390 467 2.7E-25 T 13-10-2018 IPR035647 EF-G domain III/V-like RPIT_02960 a89d8179cfa1fcf9f18476e56be849c0 682 Gene3D G3DSA:2.40.30.10 273 386 1.1E-45 T 13-10-2018 RPIT_14470 3cbc4d56830fcae9152bed62b2e269cf 980 Pfam PF00361 Proton-conducting membrane transporter 124 394 1.5E-63 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_14470 3cbc4d56830fcae9152bed62b2e269cf 980 Pfam PF13244 Domain of unknown function (DUF4040) 605 670 7.4E-20 T 13-10-2018 IPR025383 Domain of unknown function DUF4040 RPIT_14470 3cbc4d56830fcae9152bed62b2e269cf 980 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 211 232 1.4E-29 T 13-10-2018 RPIT_14470 3cbc4d56830fcae9152bed62b2e269cf 980 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 74 99 1.4E-29 T 13-10-2018 RPIT_14470 3cbc4d56830fcae9152bed62b2e269cf 980 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 301 313 1.4E-29 T 13-10-2018 RPIT_14470 3cbc4d56830fcae9152bed62b2e269cf 980 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 101 121 1.4E-29 T 13-10-2018 RPIT_14470 3cbc4d56830fcae9152bed62b2e269cf 980 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 233 259 1.4E-29 T 13-10-2018 RPIT_14470 3cbc4d56830fcae9152bed62b2e269cf 980 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 416 435 1.4E-29 T 13-10-2018 RPIT_14470 3cbc4d56830fcae9152bed62b2e269cf 980 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 806 941 4.3E-28 T 13-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein RPIT_03395 962f68de7ff68a3d06e1ef0836c9e557 263 SUPERFAMILY SSF52540 1 230 5.11E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_03395 962f68de7ff68a3d06e1ef0836c9e557 263 SMART SM00382 31 233 7.4E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_03395 962f68de7ff68a3d06e1ef0836c9e557 263 Pfam PF00005 ABC transporter 22 177 2.8E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_03395 962f68de7ff68a3d06e1ef0836c9e557 263 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_03395 962f68de7ff68a3d06e1ef0836c9e557 263 Gene3D G3DSA:3.40.50.300 1 259 2.5E-59 T 13-10-2018 RPIT_00100 2e00ac26d22370c46b55a91d537b6dbd 148 SUPERFAMILY SSF75620 10 107 2.2E-12 T 13-10-2018 RPIT_00100 2e00ac26d22370c46b55a91d537b6dbd 148 Pfam PF00472 RF-1 domain 17 141 4.4E-21 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RPIT_00100 2e00ac26d22370c46b55a91d537b6dbd 148 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 29 45 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RPIT_00100 2e00ac26d22370c46b55a91d537b6dbd 148 Gene3D G3DSA:3.30.160.20 12 146 3.8E-33 T 13-10-2018 RPIT_06290 04f979b4e9a44e9101f8059741b2f067 757 Gene3D G3DSA:3.30.70.260 678 756 2.5E-18 T 13-10-2018 RPIT_06290 04f979b4e9a44e9101f8059741b2f067 757 Pfam PF13328 HD domain 62 209 2.8E-47 T 13-10-2018 IPR003607 HD/PDEase domain RPIT_06290 04f979b4e9a44e9101f8059741b2f067 757 SUPERFAMILY SSF81271 409 481 1.55E-19 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RPIT_06290 04f979b4e9a44e9101f8059741b2f067 757 Gene3D G3DSA:3.10.20.30 416 487 7.0E-30 T 13-10-2018 IPR012675 Beta-grasp domain superfamily RPIT_06290 04f979b4e9a44e9101f8059741b2f067 757 SMART SM00954 269 379 1.2E-64 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 RPIT_06290 04f979b4e9a44e9101f8059741b2f067 757 Pfam PF13291 ACT domain 678 754 4.4E-20 T 13-10-2018 IPR002912 ACT domain RPIT_06290 04f979b4e9a44e9101f8059741b2f067 757 Gene3D G3DSA:1.10.3210.10 36 224 9.4E-78 T 13-10-2018 RPIT_06290 04f979b4e9a44e9101f8059741b2f067 757 Pfam PF02824 TGS domain 422 481 1.4E-19 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 RPIT_06290 04f979b4e9a44e9101f8059741b2f067 757 Pfam PF04607 Region found in RelA / SpoT proteins 269 378 6.2E-36 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 RPIT_06290 04f979b4e9a44e9101f8059741b2f067 757 SUPERFAMILY SSF109604 39 223 2.34E-72 T 13-10-2018 RPIT_06290 04f979b4e9a44e9101f8059741b2f067 757 SMART SM00471 77 187 2.3E-11 T 13-10-2018 IPR003607 HD/PDEase domain RPIT_06290 04f979b4e9a44e9101f8059741b2f067 757 SUPERFAMILY SSF81301 226 385 1.96E-59 T 13-10-2018 RPIT_06290 04f979b4e9a44e9101f8059741b2f067 757 SUPERFAMILY SSF55021 680 755 1.6E-13 T 13-10-2018 RPIT_06290 04f979b4e9a44e9101f8059741b2f067 757 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 62 753 4.1E-243 T 13-10-2018 IPR004811 RelA/SpoT family GO:0015969 RPIT_06290 04f979b4e9a44e9101f8059741b2f067 757 Gene3D G3DSA:3.30.460.10 227 359 1.5E-47 T 13-10-2018 RPIT_11105 53324095d9d3f1ec406a0c9986225b8a 118 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 RPIT_11105 53324095d9d3f1ec406a0c9986225b8a 118 PIRSF PIRSF000077 1 117 6.3E-26 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIT_11105 53324095d9d3f1ec406a0c9986225b8a 118 SUPERFAMILY SSF52833 5 105 3.21E-33 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_11105 53324095d9d3f1ec406a0c9986225b8a 118 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 102 4.9E-31 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIT_11105 53324095d9d3f1ec406a0c9986225b8a 118 PRINTS PR00421 Thioredoxin family signature 21 29 1.2E-6 T 13-10-2018 RPIT_11105 53324095d9d3f1ec406a0c9986225b8a 118 PRINTS PR00421 Thioredoxin family signature 68 79 1.2E-6 T 13-10-2018 RPIT_11105 53324095d9d3f1ec406a0c9986225b8a 118 PRINTS PR00421 Thioredoxin family signature 29 38 1.2E-6 T 13-10-2018 RPIT_11105 53324095d9d3f1ec406a0c9986225b8a 118 Pfam PF00085 Thioredoxin 5 101 1.8E-24 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 RPIT_11105 53324095d9d3f1ec406a0c9986225b8a 118 Gene3D G3DSA:3.40.30.10 2 114 4.0E-30 T 13-10-2018 RPIT_07845 8793e93da88fee94d92d4130edf93ded 149 SUPERFAMILY SSF47413 25 59 9.78E-5 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_11925 59817c8d008cb479ef5b501357f3f686 174 PRINTS PR00773 GrpE protein signature 49 65 8.0E-24 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RPIT_11925 59817c8d008cb479ef5b501357f3f686 174 PRINTS PR00773 GrpE protein signature 77 92 8.0E-24 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RPIT_11925 59817c8d008cb479ef5b501357f3f686 174 PRINTS PR00773 GrpE protein signature 124 139 8.0E-24 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RPIT_11925 59817c8d008cb479ef5b501357f3f686 174 PRINTS PR00773 GrpE protein signature 152 171 8.0E-24 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RPIT_11925 59817c8d008cb479ef5b501357f3f686 174 Gene3D G3DSA:2.30.22.10 116 174 8.1E-19 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 RPIT_11925 59817c8d008cb479ef5b501357f3f686 174 SUPERFAMILY SSF58014 31 116 4.97E-16 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 RPIT_11925 59817c8d008cb479ef5b501357f3f686 174 Pfam PF01025 GrpE 23 172 2.4E-37 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RPIT_11925 59817c8d008cb479ef5b501357f3f686 174 ProSitePatterns PS01071 grpE protein signature. 127 171 - T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RPIT_11925 59817c8d008cb479ef5b501357f3f686 174 Gene3D G3DSA:3.90.20.20 7 113 5.5E-15 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 RPIT_11925 59817c8d008cb479ef5b501357f3f686 174 Hamap MF_01151 Protein GrpE [grpE]. 2 173 16.804 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RPIT_11925 59817c8d008cb479ef5b501357f3f686 174 SUPERFAMILY SSF51064 119 173 4.71E-15 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 RPIT_00115 6d9599c4c5a7cea3037ee423c00da644 389 SUPERFAMILY SSF53756 1 389 5.93E-60 T 13-10-2018 RPIT_00115 6d9599c4c5a7cea3037ee423c00da644 389 Gene3D G3DSA:3.40.50.2000 9 386 4.5E-74 T 13-10-2018 RPIT_00115 6d9599c4c5a7cea3037ee423c00da644 389 Gene3D G3DSA:3.40.50.2000 211 374 4.5E-74 T 13-10-2018 RPIT_00115 6d9599c4c5a7cea3037ee423c00da644 389 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 9 387 5.4E-57 T 13-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 RPIT_00115 6d9599c4c5a7cea3037ee423c00da644 389 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 275 363 1.8E-8 T 13-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 RPIT_05420 a1f161ac88542844a37c567cfa0a7fe4 265 SMART SM00332 13 261 1.5E-15 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 RPIT_05420 a1f161ac88542844a37c567cfa0a7fe4 265 SUPERFAMILY SSF81606 23 264 9.81E-42 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 RPIT_05420 a1f161ac88542844a37c567cfa0a7fe4 265 Pfam PF13672 Protein phosphatase 2C 34 244 6.9E-20 T 13-10-2018 RPIT_05420 a1f161ac88542844a37c567cfa0a7fe4 265 SMART SM00331 37 263 3.3E-4 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 RPIT_05420 a1f161ac88542844a37c567cfa0a7fe4 265 Gene3D G3DSA:3.60.40.10 21 264 2.7E-51 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 RPIT_04400 4658214ab0b061416ffa7be60c775973 475 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 138 1.2E-31 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_04400 4658214ab0b061416ffa7be60c775973 475 Gene3D G3DSA:3.30.310.50 387 473 2.4E-15 T 13-10-2018 RPIT_04400 4658214ab0b061416ffa7be60c775973 475 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 168 268 3.0E-23 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_04400 4658214ab0b061416ffa7be60c775973 475 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 425 466 2.9E-9 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_04400 4658214ab0b061416ffa7be60c775973 475 Gene3D G3DSA:3.40.120.10 177 371 1.9E-60 T 13-10-2018 RPIT_04400 4658214ab0b061416ffa7be60c775973 475 Gene3D G3DSA:3.40.120.10 269 376 1.9E-60 T 13-10-2018 RPIT_04400 4658214ab0b061416ffa7be60c775973 475 SUPERFAMILY SSF53738 256 388 1.62E-32 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_04400 4658214ab0b061416ffa7be60c775973 475 SUPERFAMILY SSF53738 3 193 2.02E-37 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_04400 4658214ab0b061416ffa7be60c775973 475 SUPERFAMILY SSF55957 384 473 1.44E-17 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_04400 4658214ab0b061416ffa7be60c775973 475 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 248 263 6.1E-11 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_04400 4658214ab0b061416ffa7be60c775973 475 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 186 205 6.1E-11 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_04400 4658214ab0b061416ffa7be60c775973 475 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 220 233 6.1E-11 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_04400 4658214ab0b061416ffa7be60c775973 475 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 6.1E-11 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_04400 4658214ab0b061416ffa7be60c775973 475 Gene3D G3DSA:3.40.120.10 1 176 2.9E-45 T 13-10-2018 RPIT_04400 4658214ab0b061416ffa7be60c775973 475 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 273 381 2.0E-27 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_04400 4658214ab0b061416ffa7be60c775973 475 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_02695 3968a54a8e42f9adad9244e8ae6cb9b7 530 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 16 519 17.667 T 13-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 RPIT_02695 3968a54a8e42f9adad9244e8ae6cb9b7 530 Pfam PF00361 Proton-conducting membrane transporter 161 465 8.1E-71 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02695 3968a54a8e42f9adad9244e8ae6cb9b7 530 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 138 515 3.4E-113 T 13-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 RPIT_10090 7c00c3172f264c1f34328b81c7fbafc9 321 Gene3D G3DSA:3.40.50.300 8 321 8.5E-85 T 13-10-2018 RPIT_10090 7c00c3172f264c1f34328b81c7fbafc9 321 Hamap MF_00215 Pantothenate kinase [coaA]. 1 321 148.877 T 13-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 RPIT_10090 7c00c3172f264c1f34328b81c7fbafc9 321 PIRSF PIRSF000545 7 321 1.5E-125 T 13-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 RPIT_10090 7c00c3172f264c1f34328b81c7fbafc9 321 SUPERFAMILY SSF52540 15 320 3.48E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10090 7c00c3172f264c1f34328b81c7fbafc9 321 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 94 250 1.0E-11 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 RPIT_10090 7c00c3172f264c1f34328b81c7fbafc9 321 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 15 320 2.3E-114 T 13-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 RPIT_04655 54cfa45b2fb5b055b3c326f0450297fe 178 Gene3D G3DSA:3.40.630.30 6 173 2.7E-25 T 13-10-2018 RPIT_04655 54cfa45b2fb5b055b3c326f0450297fe 178 Pfam PF00583 Acetyltransferase (GNAT) family 56 145 2.6E-10 T 13-10-2018 IPR000182 GNAT domain RPIT_04655 54cfa45b2fb5b055b3c326f0450297fe 178 SUPERFAMILY SSF55729 7 153 4.01E-19 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_09005 a6ea68c538c3b5635a8bf668bf235922 163 Gene3D G3DSA:1.10.10.10 94 159 9.0E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_09005 a6ea68c538c3b5635a8bf668bf235922 163 SUPERFAMILY SSF88659 97 155 3.36E-14 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like RPIT_09005 a6ea68c538c3b5635a8bf668bf235922 163 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 152 1.1E-20 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 RPIT_09005 a6ea68c538c3b5635a8bf668bf235922 163 SUPERFAMILY SSF88946 2 95 3.92E-19 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_09005 a6ea68c538c3b5635a8bf668bf235922 163 Pfam PF04542 Sigma-70 region 2 17 75 2.0E-13 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_09005 a6ea68c538c3b5635a8bf668bf235922 163 Gene3D G3DSA:1.10.1740.10 2 77 3.4E-13 T 13-10-2018 RPIT_09005 a6ea68c538c3b5635a8bf668bf235922 163 Pfam PF08281 Sigma-70, region 4 97 150 2.6E-14 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIT_01490 d32e2c284fe98cfd55fc3467f4796690 537 SUPERFAMILY SSF53474 125 524 7.14E-27 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_01490 d32e2c284fe98cfd55fc3467f4796690 537 Pfam PF00561 alpha/beta hydrolase fold 141 508 7.7E-27 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 SMART SM01038 710 991 1.9E-58 T 13-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 Pfam PF02929 Beta galactosidase small chain 734 990 4.2E-48 T 13-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 SUPERFAMILY SSF49785 22 204 1.39E-50 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 Gene3D G3DSA:2.60.120.260 9 204 1.7E-60 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 SUPERFAMILY SSF49303 208 294 2.49E-15 T 13-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 295 592 5.9E-93 T 13-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 345 370 - T 13-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 PRINTS PR00132 Glycosyl hydrolase family 2 signature 304 318 1.5E-28 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 PRINTS PR00132 Glycosyl hydrolase family 2 signature 132 147 1.5E-28 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 PRINTS PR00132 Glycosyl hydrolase family 2 signature 495 510 1.5E-28 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 PRINTS PR00132 Glycosyl hydrolase family 2 signature 335 353 1.5E-28 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 PRINTS PR00132 Glycosyl hydrolase family 2 signature 410 425 1.5E-28 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 Gene3D G3DSA:3.20.20.80 294 588 4.8E-108 T 13-10-2018 RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 SUPERFAMILY SSF51445 295 588 1.11E-86 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 Gene3D G3DSA:2.60.40.10 589 695 8.4E-22 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 SUPERFAMILY SSF49303 585 692 2.95E-21 T 13-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 35 204 2.1E-36 T 13-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 Pfam PF16353 Domain of unknown function(DUF4981) 601 688 6.9E-16 T 13-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 Gene3D G3DSA:2.70.98.10 697 994 3.6E-81 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 Gene3D G3DSA:2.60.40.10 205 293 3.3E-19 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_01075 939ea597b7fe899e48bfed439c1c9124 994 SUPERFAMILY SSF74650 719 991 1.24E-61 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 RPIT_00620 a60f90a4f7f2ef0d127c59defed3f91e 557 SUPERFAMILY SSF53697 7 555 2.61E-201 T 13-10-2018 RPIT_00620 a60f90a4f7f2ef0d127c59defed3f91e 557 Gene3D G3DSA:3.40.50.10490 25 513 6.1E-217 T 13-10-2018 RPIT_00620 a60f90a4f7f2ef0d127c59defed3f91e 557 Pfam PF00342 Phosphoglucose isomerase 51 549 1.0E-207 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_00620 a60f90a4f7f2ef0d127c59defed3f91e 557 PRINTS PR00662 Glucose-6-phosphate isomerase signature 149 168 7.8E-56 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_00620 a60f90a4f7f2ef0d127c59defed3f91e 557 PRINTS PR00662 Glucose-6-phosphate isomerase signature 272 290 7.8E-56 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_00620 a60f90a4f7f2ef0d127c59defed3f91e 557 PRINTS PR00662 Glucose-6-phosphate isomerase signature 349 370 7.8E-56 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_00620 a60f90a4f7f2ef0d127c59defed3f91e 557 PRINTS PR00662 Glucose-6-phosphate isomerase signature 504 517 7.8E-56 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_00620 a60f90a4f7f2ef0d127c59defed3f91e 557 PRINTS PR00662 Glucose-6-phosphate isomerase signature 472 490 7.8E-56 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_00620 a60f90a4f7f2ef0d127c59defed3f91e 557 PRINTS PR00662 Glucose-6-phosphate isomerase signature 490 504 7.8E-56 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_00620 a60f90a4f7f2ef0d127c59defed3f91e 557 Gene3D G3DSA:3.40.50.10490 97 302 6.1E-217 T 13-10-2018 RPIT_00620 a60f90a4f7f2ef0d127c59defed3f91e 557 Gene3D G3DSA:1.10.1390.10 514 556 1.2E-14 T 13-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_00620 a60f90a4f7f2ef0d127c59defed3f91e 557 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 504 521 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_00620 a60f90a4f7f2ef0d127c59defed3f91e 557 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 45 531 40.471 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_00620 a60f90a4f7f2ef0d127c59defed3f91e 557 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 276 289 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_05595 c9ee334826e5ede69bf9eeaf4cd67b1a 220 Pfam PF02254 TrkA-N domain 3 116 3.7E-22 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RPIT_05595 c9ee334826e5ede69bf9eeaf4cd67b1a 220 Pfam PF02080 TrkA-C domain 152 213 4.6E-8 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RPIT_05595 c9ee334826e5ede69bf9eeaf4cd67b1a 220 Gene3D G3DSA:3.40.50.720 1 131 7.4E-30 T 13-10-2018 RPIT_05595 c9ee334826e5ede69bf9eeaf4cd67b1a 220 SUPERFAMILY SSF51735 2 133 1.74E-26 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_05595 c9ee334826e5ede69bf9eeaf4cd67b1a 220 SUPERFAMILY SSF116726 146 213 6.28E-8 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 RPIT_05595 c9ee334826e5ede69bf9eeaf4cd67b1a 220 Gene3D G3DSA:3.30.70.1450 142 216 1.3E-9 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 RPIT_09755 d52bdf66d7a7476ad14c351c11de5397 353 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 9 344 8.5E-74 T 13-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 RPIT_09755 d52bdf66d7a7476ad14c351c11de5397 353 SUPERFAMILY SSF51556 5 339 3.32E-72 T 13-10-2018 IPR032466 Metal-dependent hydrolase RPIT_09755 d52bdf66d7a7476ad14c351c11de5397 353 Pfam PF00962 Adenosine/AMP deaminase 9 343 6.5E-76 T 13-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 RPIT_09755 d52bdf66d7a7476ad14c351c11de5397 353 Gene3D G3DSA:3.20.20.140 2 351 3.9E-101 T 13-10-2018 RPIT_05465 17ae8a80037517d0f8255050b7df417e 219 Gene3D G3DSA:3.40.50.10420 37 216 1.8E-56 T 13-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily RPIT_05465 17ae8a80037517d0f8255050b7df417e 219 SUPERFAMILY SSF100950 38 215 3.18E-35 T 13-10-2018 IPR037171 NagB/RpiA transferase-like RPIT_05465 17ae8a80037517d0f8255050b7df417e 219 Pfam PF02589 LUD domain 111 215 3.0E-21 T 13-10-2018 IPR003741 LUD domain RPIT_04180 4bf3af9ba224bc57d331d39c00204c48 194 Gene3D G3DSA:1.10.1760.20 5 190 2.9E-45 T 13-10-2018 RPIT_04180 4bf3af9ba224bc57d331d39c00204c48 194 PIRSF PIRSF016661 2 194 5.8E-38 T 13-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 RPIT_04180 4bf3af9ba224bc57d331d39c00204c48 194 Pfam PF02632 BioY family 40 185 2.6E-31 T 13-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 RPIT_01985 60f725ae9c6acbb766779abfe15afd7e 191 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 7 185 4.5E-56 T 13-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RPIT_01985 60f725ae9c6acbb766779abfe15afd7e 191 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 10 188 4.1E-43 T 13-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RPIT_01985 60f725ae9c6acbb766779abfe15afd7e 191 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 4 188 26.878 T 13-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RPIT_01985 60f725ae9c6acbb766779abfe15afd7e 191 SUPERFAMILY SSF50486 10 190 3.77E-50 T 13-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 RPIT_01985 60f725ae9c6acbb766779abfe15afd7e 191 Gene3D G3DSA:3.10.300.10 4 191 5.2E-56 T 13-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RPIT_10755 0d59a002970bd7c582aaa28b7406f634 217 SMART SM00862 145 215 2.4E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_10755 0d59a002970bd7c582aaa28b7406f634 217 Gene3D G3DSA:1.10.10.10 123 216 4.5E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_10755 0d59a002970bd7c582aaa28b7406f634 217 Gene3D G3DSA:3.40.50.2300 1 121 2.3E-35 T 13-10-2018 RPIT_10755 0d59a002970bd7c582aaa28b7406f634 217 Pfam PF00072 Response regulator receiver domain 3 112 2.0E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_10755 0d59a002970bd7c582aaa28b7406f634 217 SUPERFAMILY SSF52172 2 173 7.4E-40 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_10755 0d59a002970bd7c582aaa28b7406f634 217 SMART SM00448 1 112 1.2E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_10755 0d59a002970bd7c582aaa28b7406f634 217 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 214 7.3E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_09140 16081d01eb76703eed529bdc4174a058 383 Pfam PF06114 IrrE N-terminal-like domain 170 291 8.9E-17 T 13-10-2018 IPR010359 IrrE N-terminal-like domain RPIT_09140 16081d01eb76703eed529bdc4174a058 383 Gene3D G3DSA:1.10.260.40 13 78 5.6E-13 T 13-10-2018 RPIT_09140 16081d01eb76703eed529bdc4174a058 383 SMART SM00530 20 75 6.1E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_09140 16081d01eb76703eed529bdc4174a058 383 SUPERFAMILY SSF47413 15 77 1.72E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_09140 16081d01eb76703eed529bdc4174a058 383 Pfam PF13560 Helix-turn-helix domain 20 72 5.9E-11 T 13-10-2018 RPIT_04030 3ae5684288e06cb390560ad0db182208 365 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 359 30.757 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RPIT_04030 3ae5684288e06cb390560ad0db182208 365 SUPERFAMILY SSF53756 3 359 7.12E-95 T 13-10-2018 RPIT_04030 3ae5684288e06cb390560ad0db182208 365 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 187 349 3.6E-36 T 13-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 RPIT_04030 3ae5684288e06cb390560ad0db182208 365 Gene3D G3DSA:3.40.50.2000 5 349 2.2E-96 T 13-10-2018 RPIT_04030 3ae5684288e06cb390560ad0db182208 365 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 354 1.2E-81 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RPIT_04030 3ae5684288e06cb390560ad0db182208 365 Gene3D G3DSA:3.40.50.2000 161 343 2.2E-96 T 13-10-2018 RPIT_04030 3ae5684288e06cb390560ad0db182208 365 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 140 2.7E-33 T 13-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RPIT_12215 15cb6d5a6217a428ada1b78e18860739 424 Pfam PF01842 ACT domain 271 333 1.4E-9 T 13-10-2018 IPR002912 ACT domain RPIT_12215 15cb6d5a6217a428ada1b78e18860739 424 SUPERFAMILY SSF53633 3 242 5.24E-73 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily RPIT_12215 15cb6d5a6217a428ada1b78e18860739 424 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 62 409 3.8E-114 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 RPIT_12215 15cb6d5a6217a428ada1b78e18860739 424 Pfam PF00696 Amino acid kinase family 3 231 2.0E-56 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 RPIT_12215 15cb6d5a6217a428ada1b78e18860739 424 PRINTS PR00474 Glutamate 5-kinase family signature 153 180 3.6E-5 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 RPIT_12215 15cb6d5a6217a428ada1b78e18860739 424 PRINTS PR00474 Glutamate 5-kinase family signature 205 225 3.6E-5 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 RPIT_12215 15cb6d5a6217a428ada1b78e18860739 424 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 3.6E-5 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 RPIT_12215 15cb6d5a6217a428ada1b78e18860739 424 Gene3D G3DSA:3.40.1160.10 1 251 2.5E-91 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily RPIT_12215 15cb6d5a6217a428ada1b78e18860739 424 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 RPIT_12215 15cb6d5a6217a428ada1b78e18860739 424 PIRSF PIRSF000726 1 62 6.6E-18 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 RPIT_12215 15cb6d5a6217a428ada1b78e18860739 424 PIRSF PIRSF000726 54 417 4.9E-125 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 RPIT_12215 15cb6d5a6217a428ada1b78e18860739 424 SUPERFAMILY SSF55021 335 411 1.07E-22 T 13-10-2018 RPIT_12215 15cb6d5a6217a428ada1b78e18860739 424 Pfam PF13840 ACT domain 344 403 9.4E-13 T 13-10-2018 IPR027795 CASTOR, ACT domain RPIT_12215 15cb6d5a6217a428ada1b78e18860739 424 Gene3D G3DSA:3.30.2130.10 252 424 1.2E-65 T 13-10-2018 RPIT_12215 15cb6d5a6217a428ada1b78e18860739 424 SUPERFAMILY SSF55021 253 332 6.41E-19 T 13-10-2018 RPIT_07365 1fda6911759c9bb2eecce3a9f822e95b 267 Pfam PF04471 Restriction endonuclease 147 241 1.6E-14 T 13-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 RPIT_07365 1fda6911759c9bb2eecce3a9f822e95b 267 SUPERFAMILY SSF52980 150 244 2.36E-10 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RPIT_04270 af32d2717f442e9fd7278de7d19a6802 513 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 203 209 - T 13-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RPIT_04270 af32d2717f442e9fd7278de7d19a6802 513 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 215 511 7.0E-111 T 13-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RPIT_04270 af32d2717f442e9fd7278de7d19a6802 513 Gene3D G3DSA:3.30.360.10 202 512 3.0E-120 T 13-10-2018 RPIT_04270 af32d2717f442e9fd7278de7d19a6802 513 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 26 512 87.489 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RPIT_04270 af32d2717f442e9fd7278de7d19a6802 513 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 30 213 1.0E-61 T 13-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RPIT_04270 af32d2717f442e9fd7278de7d19a6802 513 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 263 279 1.1E-48 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RPIT_04270 af32d2717f442e9fd7278de7d19a6802 513 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 169 182 1.1E-48 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RPIT_04270 af32d2717f442e9fd7278de7d19a6802 513 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 193 221 1.1E-48 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RPIT_04270 af32d2717f442e9fd7278de7d19a6802 513 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 352 378 1.1E-48 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RPIT_04270 af32d2717f442e9fd7278de7d19a6802 513 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 245 262 1.1E-48 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RPIT_04270 af32d2717f442e9fd7278de7d19a6802 513 SUPERFAMILY SSF55347 203 511 2.13E-113 T 13-10-2018 RPIT_04270 af32d2717f442e9fd7278de7d19a6802 513 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 26 512 5.9E-199 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RPIT_04270 af32d2717f442e9fd7278de7d19a6802 513 Gene3D G3DSA:3.40.50.720 24 201 9.6E-54 T 13-10-2018 RPIT_04270 af32d2717f442e9fd7278de7d19a6802 513 PIRSF PIRSF000110 9 513 2.2E-179 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RPIT_04270 af32d2717f442e9fd7278de7d19a6802 513 SUPERFAMILY SSF51735 13 216 9.05E-62 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_04870 516c46c351c7d80c75211d1309603634 827 Pfam PF00271 Helicase conserved C-terminal domain 226 344 5.7E-10 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_04870 516c46c351c7d80c75211d1309603634 827 Gene3D G3DSA:1.20.120.1080 396 466 3.6E-7 T 13-10-2018 RPIT_04870 516c46c351c7d80c75211d1309603634 827 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 14 827 4.6E-189 T 13-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 RPIT_04870 516c46c351c7d80c75211d1309603634 827 Gene3D G3DSA:3.40.50.300 207 361 1.3E-35 T 13-10-2018 RPIT_04870 516c46c351c7d80c75211d1309603634 827 SUPERFAMILY SSF52540 27 355 7.4E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04870 516c46c351c7d80c75211d1309603634 827 PIRSF PIRSF005496 10 827 1.4E-240 T 13-10-2018 RPIT_04870 516c46c351c7d80c75211d1309603634 827 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 126 135 - T 13-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site RPIT_04870 516c46c351c7d80c75211d1309603634 827 Gene3D G3DSA:3.40.50.300 2 188 8.9E-53 T 13-10-2018 RPIT_04870 516c46c351c7d80c75211d1309603634 827 SMART SM00487 11 196 8.1E-17 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIT_04870 516c46c351c7d80c75211d1309603634 827 SMART SM00847 404 497 2.1E-5 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 RPIT_04870 516c46c351c7d80c75211d1309603634 827 Pfam PF04408 Helicase associated domain (HA2) 408 460 5.8E-8 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 RPIT_04870 516c46c351c7d80c75211d1309603634 827 Pfam PF08482 ATP-dependent helicase C-terminal 679 814 2.4E-48 T 13-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal RPIT_04870 516c46c351c7d80c75211d1309603634 827 SMART SM00490 245 344 1.7E-10 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_01170 a1d35db27269bf550a87ae1b95220ed1 291 SUPERFAMILY SSF141523 180 290 2.22E-18 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like RPIT_01170 a1d35db27269bf550a87ae1b95220ed1 291 Pfam PF03734 L,D-transpeptidase catalytic domain 181 289 1.5E-11 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 RPIT_01170 a1d35db27269bf550a87ae1b95220ed1 291 Gene3D G3DSA:2.40.440.10 172 290 8.6E-19 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like RPIT_06000 b44704babff5e5bec8d59192d5805e07 196 Gene3D G3DSA:3.40.50.150 4 169 1.2E-25 T 13-10-2018 RPIT_06000 b44704babff5e5bec8d59192d5805e07 196 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 2 193 5.1E-66 T 13-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 RPIT_06000 b44704babff5e5bec8d59192d5805e07 196 Pfam PF07021 Methionine biosynthesis protein MetW 2 192 2.6E-60 T 13-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 RPIT_06000 b44704babff5e5bec8d59192d5805e07 196 SUPERFAMILY SSF53335 3 167 6.6E-28 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_00350 3dc084616ee357b9f13a171ee2c7a5ac 358 SUPERFAMILY SSF52518 19 350 2.03E-89 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_00350 3dc084616ee357b9f13a171ee2c7a5ac 358 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 1 347 1.1E-124 T 13-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RPIT_00350 3dc084616ee357b9f13a171ee2c7a5ac 358 Pfam PF00676 Dehydrogenase E1 component 33 308 1.4E-70 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 RPIT_00350 3dc084616ee357b9f13a171ee2c7a5ac 358 Gene3D G3DSA:3.40.50.970 1 347 1.2E-103 T 13-10-2018 RPIT_08920 ff94bd47250815d39e8bde8f9dcd4854 409 Pfam PF13530 Sterol carrier protein domain 194 402 6.4E-30 T 13-10-2018 IPR025559 Enhanced intracellular survival protein domain RPIT_08920 ff94bd47250815d39e8bde8f9dcd4854 409 Gene3D G3DSA:3.40.630.30 145 297 1.1E-18 T 13-10-2018 RPIT_08920 ff94bd47250815d39e8bde8f9dcd4854 409 Gene3D G3DSA:3.30.1050.10 304 399 1.7E-20 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily RPIT_08920 ff94bd47250815d39e8bde8f9dcd4854 409 SUPERFAMILY SSF55729 34 305 8.62E-39 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_08920 ff94bd47250815d39e8bde8f9dcd4854 409 SUPERFAMILY SSF55718 306 404 1.53E-14 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily RPIT_08920 ff94bd47250815d39e8bde8f9dcd4854 409 Pfam PF13527 Acetyltransferase (GNAT) domain 25 142 7.2E-18 T 13-10-2018 RPIT_08920 ff94bd47250815d39e8bde8f9dcd4854 409 Gene3D G3DSA:3.40.630.30 9 144 3.1E-25 T 13-10-2018 RPIT_11140 2e38319640be6240d055288bbacecf56 1134 Gene3D G3DSA:3.10.600.10 463 1046 3.2E-225 T 13-10-2018 RPIT_11140 2e38319640be6240d055288bbacecf56 1134 Gene3D G3DSA:3.20.20.70 480 995 3.2E-225 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_11140 2e38319640be6240d055288bbacecf56 1134 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 117 327 6.7E-69 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIT_11140 2e38319640be6240d055288bbacecf56 1134 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1088 1105 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RPIT_11140 2e38319640be6240d055288bbacecf56 1134 PIRSF PIRSF001594 1 1133 0.0 T 13-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 RPIT_11140 2e38319640be6240d055288bbacecf56 1134 SUPERFAMILY SSF56059 84 355 1.61E-66 T 13-10-2018 RPIT_11140 2e38319640be6240d055288bbacecf56 1134 SUPERFAMILY SSF52440 1 112 8.63E-41 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily RPIT_11140 2e38319640be6240d055288bbacecf56 1134 SUPERFAMILY SSF51230 1056 1131 5.63E-14 T 13-10-2018 IPR011053 Single hybrid motif RPIT_11140 2e38319640be6240d055288bbacecf56 1134 SUPERFAMILY SSF51246 338 454 3.61E-36 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 RPIT_11140 2e38319640be6240d055288bbacecf56 1134 Pfam PF00364 Biotin-requiring enzyme 1074 1131 1.1E-11 T 13-10-2018 IPR000089 Biotin/lipoyl attachment RPIT_11140 2e38319640be6240d055288bbacecf56 1134 SUPERFAMILY SSF89000 829 996 1.8E-39 T 13-10-2018 RPIT_11140 2e38319640be6240d055288bbacecf56 1134 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 111 1.2E-39 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RPIT_11140 2e38319640be6240d055288bbacecf56 1134 Gene3D G3DSA:2.40.50.100 1056 1132 3.5E-15 T 13-10-2018 RPIT_11140 2e38319640be6240d055288bbacecf56 1134 SMART SM00878 343 450 2.0E-51 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RPIT_11140 2e38319640be6240d055288bbacecf56 1134 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIT_11140 2e38319640be6240d055288bbacecf56 1134 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 4 1131 0.0 T 13-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 RPIT_11140 2e38319640be6240d055288bbacecf56 1134 Pfam PF02436 Conserved carboxylase domain 824 1014 1.1E-51 T 13-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 RPIT_11140 2e38319640be6240d055288bbacecf56 1134 SUPERFAMILY SSF51569 528 832 1.21E-75 T 13-10-2018 RPIT_11140 2e38319640be6240d055288bbacecf56 1134 Pfam PF02785 Biotin carboxylase C-terminal domain 343 451 6.2E-33 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RPIT_11140 2e38319640be6240d055288bbacecf56 1134 Pfam PF00682 HMGL-like 531 796 2.4E-27 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 RPIT_11140 2e38319640be6240d055288bbacecf56 1134 Gene3D G3DSA:3.30.470.130 1 458 2.0E-181 T 13-10-2018 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 Pfam PF00013 KH domain 585 641 2.8E-11 T 13-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 SUPERFAMILY SSF46915 265 345 1.31E-18 T 13-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 Gene3D G3DSA:3.30.230.70 260 578 5.4E-105 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 SUPERFAMILY SSF55666 475 574 1.78E-22 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 PIRSF PIRSF005499 8 733 1.9E-279 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 SMART SM00322 580 645 1.3E-13 T 13-10-2018 IPR004087 K Homology domain GO:0003676 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 10 727 26.44 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 Pfam PF00575 S1 RNA binding domain 649 719 1.1E-10 T 13-10-2018 IPR003029 S1 domain GO:0003676 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 SUPERFAMILY SSF54211 319 516 2.58E-43 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 Gene3D G3DSA:3.30.230.70 5 251 4.6E-86 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 Gene3D G3DSA:2.40.50.140 579 706 7.0E-48 T 13-10-2018 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 268 344 1.6E-18 T 13-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 TIGRFAM TIGR02696 pppGpp_PNP: guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase 5 723 0.0 T 13-10-2018 IPR014069 Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase GO:0004654|GO:0005737|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 18 721 3.5E-254 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 SMART SM00316 650 724 1.5E-16 T 13-10-2018 IPR022967 RNA-binding domain, S1 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 SUPERFAMILY SSF54791 577 688 1.31E-18 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 Pfam PF01138 3' exoribonuclease family, domain 1 23 152 3.6E-15 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 Pfam PF01138 3' exoribonuclease family, domain 1 349 481 2.2E-14 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 SUPERFAMILY SSF55666 153 261 3.39E-28 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RPIT_04640 884f0e48a8fba1f5afd9d5fa2116b431 733 SUPERFAMILY SSF54211 9 152 3.85E-46 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RPIT_11895 17b1ea1ba32faafc96933a04e0bd768f 510 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 427 509 6.8E-35 T 13-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 RPIT_11895 17b1ea1ba32faafc96933a04e0bd768f 510 SUPERFAMILY SSF51735 136 301 3.0E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_11895 17b1ea1ba32faafc96933a04e0bd768f 510 SUPERFAMILY SSF52283 1 166 1.11E-48 T 13-10-2018 RPIT_11895 17b1ea1ba32faafc96933a04e0bd768f 510 Gene3D G3DSA:3.40.50.720 3 362 3.3E-141 T 13-10-2018 RPIT_11895 17b1ea1ba32faafc96933a04e0bd768f 510 SMART SM01002 144 309 1.2E-70 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RPIT_11895 17b1ea1ba32faafc96933a04e0bd768f 510 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 3 509 7.8E-212 T 13-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 RPIT_11895 17b1ea1ba32faafc96933a04e0bd768f 510 SMART SM01003 4 135 2.9E-58 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RPIT_11895 17b1ea1ba32faafc96933a04e0bd768f 510 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 134 1.6E-41 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RPIT_11895 17b1ea1ba32faafc96933a04e0bd768f 510 PIRSF PIRSF000203 1 509 8.9E-240 T 13-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 RPIT_11895 17b1ea1ba32faafc96933a04e0bd768f 510 Gene3D G3DSA:3.40.50.720 135 316 3.3E-141 T 13-10-2018 RPIT_11895 17b1ea1ba32faafc96933a04e0bd768f 510 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 139 366 2.1E-66 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RPIT_12385 3c889ebbd43eed30736b0aeed79cc3c2 364 Gene3D G3DSA:2.120.10.10 7 338 7.7E-82 T 13-10-2018 RPIT_12385 3c889ebbd43eed30736b0aeed79cc3c2 364 SUPERFAMILY SSF50939 18 335 9.81E-69 T 13-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RPIT_12385 3c889ebbd43eed30736b0aeed79cc3c2 364 Pfam PF13088 BNR repeat-like domain 107 314 7.6E-18 T 13-10-2018 IPR011040 Sialidase KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 RPIT_00920 636d4068128080b28f045c9d6df740f6 629 Pfam PF00534 Glycosyl transferases group 1 518 587 2.3E-14 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 RPIT_00920 636d4068128080b28f045c9d6df740f6 629 Gene3D G3DSA:3.40.50.2000 158 390 3.7E-23 T 13-10-2018 RPIT_00920 636d4068128080b28f045c9d6df740f6 629 Pfam PF13646 HEAT repeats 44 120 5.3E-8 T 13-10-2018 RPIT_00920 636d4068128080b28f045c9d6df740f6 629 Pfam PF13439 Glycosyltransferase Family 4 181 376 8.2E-14 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RPIT_00920 636d4068128080b28f045c9d6df740f6 629 Gene3D G3DSA:3.40.50.2000 402 605 1.2E-32 T 13-10-2018 RPIT_00920 636d4068128080b28f045c9d6df740f6 629 SUPERFAMILY SSF53756 177 620 7.63E-48 T 13-10-2018 RPIT_00920 636d4068128080b28f045c9d6df740f6 629 SUPERFAMILY SSF48371 39 117 5.83E-8 T 13-10-2018 IPR016024 Armadillo-type fold RPIT_00920 636d4068128080b28f045c9d6df740f6 629 Gene3D G3DSA:1.25.10.10 5 149 1.3E-6 T 13-10-2018 IPR011989 Armadillo-like helical RPIT_03065 f84d80c0d03d00d20117ee5b927176f3 133 Pfam PF00237 Ribosomal protein L22p/L17e 23 125 6.1E-33 T 13-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RPIT_03065 f84d80c0d03d00d20117ee5b927176f3 133 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 19 128 27.014 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03065 f84d80c0d03d00d20117ee5b927176f3 133 SUPERFAMILY SSF54843 20 129 5.1E-38 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 RPIT_03065 f84d80c0d03d00d20117ee5b927176f3 133 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 23 125 3.8E-40 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03065 f84d80c0d03d00d20117ee5b927176f3 133 Gene3D G3DSA:3.90.470.10 20 132 1.5E-43 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 RPIT_03065 f84d80c0d03d00d20117ee5b927176f3 133 ProSitePatterns PS00464 Ribosomal protein L22 signature. 101 125 - T 13-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_10035 48c58ecee6971259a265544c54b6f180 353 Gene3D G3DSA:3.30.420.40 12 331 4.0E-114 T 13-10-2018 RPIT_10035 48c58ecee6971259a265544c54b6f180 353 Pfam PF00814 Glycoprotease family 32 322 1.6E-94 T 13-10-2018 IPR000905 Gcp-like domain RPIT_10035 48c58ecee6971259a265544c54b6f180 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 13 26 1.6E-50 T 13-10-2018 IPR017861 Kae1/TsaD family RPIT_10035 48c58ecee6971259a265544c54b6f180 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 139 151 1.6E-50 T 13-10-2018 IPR017861 Kae1/TsaD family RPIT_10035 48c58ecee6971259a265544c54b6f180 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 163 184 1.6E-50 T 13-10-2018 IPR017861 Kae1/TsaD family RPIT_10035 48c58ecee6971259a265544c54b6f180 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 279 288 1.6E-50 T 13-10-2018 IPR017861 Kae1/TsaD family RPIT_10035 48c58ecee6971259a265544c54b6f180 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 84 104 1.6E-50 T 13-10-2018 IPR017861 Kae1/TsaD family RPIT_10035 48c58ecee6971259a265544c54b6f180 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 105 124 1.6E-50 T 13-10-2018 IPR017861 Kae1/TsaD family RPIT_10035 48c58ecee6971259a265544c54b6f180 353 ProSitePatterns PS01016 Glycoprotease family signature. 104 124 - T 13-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 RPIT_10035 48c58ecee6971259a265544c54b6f180 353 SUPERFAMILY SSF53067 11 323 8.13E-37 T 13-10-2018 RPIT_10035 48c58ecee6971259a265544c54b6f180 353 Gene3D G3DSA:3.30.420.40 137 309 4.0E-114 T 13-10-2018 RPIT_10035 48c58ecee6971259a265544c54b6f180 353 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 10 348 60.044 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 RPIT_10035 48c58ecee6971259a265544c54b6f180 353 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 13 322 7.2E-97 T 13-10-2018 IPR017861 Kae1/TsaD family RPIT_10035 48c58ecee6971259a265544c54b6f180 353 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 12 328 1.4E-124 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 RPIT_03715 ec8903e6b075c54f6cf291ffadd7945f 269 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 147 220 9.4E-13 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03715 ec8903e6b075c54f6cf291ffadd7945f 269 Pfam PF00034 Cytochrome c 48 123 2.1E-8 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03715 ec8903e6b075c54f6cf291ffadd7945f 269 Gene3D G3DSA:1.10.760.10 9 125 5.3E-15 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 RPIT_03715 ec8903e6b075c54f6cf291ffadd7945f 269 SUPERFAMILY SSF46626 16 126 2.7E-17 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 RPIT_03715 ec8903e6b075c54f6cf291ffadd7945f 269 SUPERFAMILY SSF46626 145 221 4.8E-17 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 RPIT_03715 ec8903e6b075c54f6cf291ffadd7945f 269 Gene3D G3DSA:1.10.760.10 131 229 1.9E-14 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 RPIT_03715 ec8903e6b075c54f6cf291ffadd7945f 269 PIRSF PIRSF000007 2 267 5.5E-86 T 13-10-2018 IPR009152 Cytochrome bc1 complex, cytochrome c subunit GO:0005506|GO:0009055|GO:0016021|GO:0020037 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 RPIT_01865 575d25154196e0c03cfef88d0723655b 206 SUPERFAMILY SSF101473 2 203 2.35E-54 T 13-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RPIT_01865 575d25154196e0c03cfef88d0723655b 206 Gene3D G3DSA:1.25.40.340 1 205 7.4E-62 T 13-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RPIT_01865 575d25154196e0c03cfef88d0723655b 206 SMART SM01120 30 202 1.9E-65 T 13-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RPIT_01865 575d25154196e0c03cfef88d0723655b 206 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 8 201 8.0E-70 T 13-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 RPIT_01865 575d25154196e0c03cfef88d0723655b 206 Pfam PF02734 DAK2 domain 30 201 1.2E-49 T 13-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RPIT_04615 38aa5eebc45bdd3247a84d8bdedabbc5 306 SUPERFAMILY SSF52374 16 169 2.95E-25 T 13-10-2018 RPIT_04615 38aa5eebc45bdd3247a84d8bdedabbc5 306 PIRSF PIRSF004491 4 306 1.5E-83 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 RPIT_04615 38aa5eebc45bdd3247a84d8bdedabbc5 306 Gene3D G3DSA:3.40.50.620 5 179 9.2E-52 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_04615 38aa5eebc45bdd3247a84d8bdedabbc5 306 SMART SM00904 177 306 1.1E-46 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 RPIT_04615 38aa5eebc45bdd3247a84d8bdedabbc5 306 Pfam PF06574 FAD synthetase 11 154 3.6E-38 T 13-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 RPIT_04615 38aa5eebc45bdd3247a84d8bdedabbc5 306 Gene3D G3DSA:2.40.30.30 180 306 6.7E-38 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 RPIT_04615 38aa5eebc45bdd3247a84d8bdedabbc5 306 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 305 6.3E-63 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 RPIT_04615 38aa5eebc45bdd3247a84d8bdedabbc5 306 SUPERFAMILY SSF82114 169 306 1.18E-36 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 RPIT_04615 38aa5eebc45bdd3247a84d8bdedabbc5 306 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 17 80 1.0E-8 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIT_04615 38aa5eebc45bdd3247a84d8bdedabbc5 306 Pfam PF01687 Riboflavin kinase 178 305 2.7E-31 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 RPIT_05510 51e2b69602f7a10966ccc6f9375ef0a0 371 Gene3D G3DSA:3.40.720.10 30 370 4.1E-37 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 RPIT_05510 51e2b69602f7a10966ccc6f9375ef0a0 371 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 40 354 4.9E-27 T 13-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 RPIT_05510 51e2b69602f7a10966ccc6f9375ef0a0 371 SUPERFAMILY SSF53649 35 368 2.09E-46 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 Pfam PF00381 PTS HPr component phosphorylation site 175 252 6.6E-22 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 Gene3D G3DSA:3.30.1340.10 172 258 2.1E-24 T 13-10-2018 IPR035895 HPr-like superfamily RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 PRINTS PR00107 Phosphocarrier protein signature 208 223 4.5E-10 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 PRINTS PR00107 Phosphocarrier protein signature 183 199 4.5E-10 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 PRINTS PR00107 Phosphocarrier protein signature 223 240 4.5E-10 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 SUPERFAMILY SSF51621 535 831 8.57E-93 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 Pfam PF05524 PEP-utilising enzyme, N-terminal 291 410 9.1E-21 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 291 847 4.5E-151 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 173 251 2.2E-21 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 Gene3D G3DSA:2.70.70.10 3 152 1.6E-46 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 8 131 1.2E-42 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 Gene3D G3DSA:3.20.20.60 518 850 3.1E-109 T 13-10-2018 RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 576 595 5.7E-20 T 13-10-2018 RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 782 794 5.7E-20 T 13-10-2018 RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 746 761 5.7E-20 T 13-10-2018 RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 729 744 5.7E-20 T 13-10-2018 RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 Pfam PF00391 PEP-utilising enzyme, mobile domain 435 508 1.5E-21 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 9 129 2.9E-38 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 Gene3D G3DSA:1.10.274.10 309 430 2.1E-66 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 183 190 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 534 821 6.2E-95 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 SUPERFAMILY SSF47831 318 427 5.23E-25 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 71 83 - T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 SUPERFAMILY SSF55594 174 258 1.57E-22 T 13-10-2018 IPR035895 HPr-like superfamily RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 SUPERFAMILY SSF52009 410 528 1.01E-30 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 SUPERFAMILY SSF51261 6 150 2.09E-45 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_05575 afab26d1fb496d61cf9f6168eddd2e92 852 Gene3D G3DSA:3.50.30.10 292 516 2.1E-66 T 13-10-2018 RPIT_00385 920781175896b4ae61d58f2253b62af2 287 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 86 5.6E-13 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RPIT_00385 920781175896b4ae61d58f2253b62af2 287 Pfam PF06827 Zinc finger found in FPG and IleRS 244 271 2.0E-5 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 RPIT_00385 920781175896b4ae61d58f2253b62af2 287 SMART SM00898 2 122 5.1E-18 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RPIT_00385 920781175896b4ae61d58f2253b62af2 287 Gene3D G3DSA:1.10.8.50 136 272 8.3E-34 T 13-10-2018 RPIT_00385 920781175896b4ae61d58f2253b62af2 287 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 136 219 2.0E-18 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RPIT_00385 920781175896b4ae61d58f2253b62af2 287 SUPERFAMILY SSF57716 229 272 1.62E-9 T 13-10-2018 RPIT_00385 920781175896b4ae61d58f2253b62af2 287 SMART SM01232 136 229 3.7E-26 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RPIT_00385 920781175896b4ae61d58f2253b62af2 287 SUPERFAMILY SSF46946 136 218 6.28E-22 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RPIT_00385 920781175896b4ae61d58f2253b62af2 287 Gene3D G3DSA:3.20.190.10 1 120 2.0E-11 T 13-10-2018 IPR035937 MutM-like, N-terminal RPIT_00385 920781175896b4ae61d58f2253b62af2 287 SUPERFAMILY SSF81624 2 141 2.49E-20 T 13-10-2018 IPR035937 MutM-like, N-terminal RPIT_09095 c517acc9f5cae4563fbd76ffef0bb40f 452 Gene3D G3DSA:3.40.640.10 128 235 8.4E-21 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_09095 c517acc9f5cae4563fbd76ffef0bb40f 452 Gene3D G3DSA:3.90.1150.10 94 127 8.4E-21 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_09095 c517acc9f5cae4563fbd76ffef0bb40f 452 Gene3D G3DSA:3.90.1150.10 365 443 4.8E-21 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_09095 c517acc9f5cae4563fbd76ffef0bb40f 452 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 277 314 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIT_09095 c517acc9f5cae4563fbd76ffef0bb40f 452 SUPERFAMILY SSF53383 91 446 6.33E-44 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_09095 c517acc9f5cae4563fbd76ffef0bb40f 452 Pfam PF00202 Aminotransferase class-III 93 223 6.3E-13 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIT_09095 c517acc9f5cae4563fbd76ffef0bb40f 452 Pfam PF00202 Aminotransferase class-III 272 445 2.7E-13 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIT_09095 c517acc9f5cae4563fbd76ffef0bb40f 452 Gene3D G3DSA:3.40.640.10 271 364 4.8E-21 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_06595 beaf4e16428ee3ff5cdbcbe5db194426 541 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 206 310 2.3E-9 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_06595 beaf4e16428ee3ff5cdbcbe5db194426 541 SUPERFAMILY SSF53738 301 443 2.08E-32 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_06595 beaf4e16428ee3ff5cdbcbe5db194426 541 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 465 533 2.4E-7 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_06595 beaf4e16428ee3ff5cdbcbe5db194426 541 SUPERFAMILY SSF55957 429 540 9.42E-19 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_06595 beaf4e16428ee3ff5cdbcbe5db194426 541 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 2 539 2.5E-254 T 13-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 RPIT_06595 beaf4e16428ee3ff5cdbcbe5db194426 541 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_06595 beaf4e16428ee3ff5cdbcbe5db194426 541 Gene3D G3DSA:3.40.120.10 217 313 1.2E-38 T 13-10-2018 RPIT_06595 beaf4e16428ee3ff5cdbcbe5db194426 541 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 316 433 4.8E-28 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_06595 beaf4e16428ee3ff5cdbcbe5db194426 541 Gene3D G3DSA:3.40.120.10 16 216 1.3E-65 T 13-10-2018 RPIT_06595 beaf4e16428ee3ff5cdbcbe5db194426 541 SUPERFAMILY SSF53738 206 312 5.47E-8 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_06595 beaf4e16428ee3ff5cdbcbe5db194426 541 Gene3D G3DSA:3.40.120.10 314 438 3.4E-35 T 13-10-2018 RPIT_06595 beaf4e16428ee3ff5cdbcbe5db194426 541 Gene3D G3DSA:3.30.310.50 439 540 3.1E-32 T 13-10-2018 RPIT_06595 beaf4e16428ee3ff5cdbcbe5db194426 541 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 178 7.9E-33 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_06595 beaf4e16428ee3ff5cdbcbe5db194426 541 SUPERFAMILY SSF53738 24 231 3.53E-44 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_14720 be7773557c72d290e4fbfffcaf48dd59 359 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 252 338 1.7E-23 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIT_14720 be7773557c72d290e4fbfffcaf48dd59 359 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_14720 be7773557c72d290e4fbfffcaf48dd59 359 Gene3D G3DSA:3.40.50.300 20 347 4.3E-96 T 13-10-2018 RPIT_14720 be7773557c72d290e4fbfffcaf48dd59 359 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 253 317 8.0E-20 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIT_14720 be7773557c72d290e4fbfffcaf48dd59 359 SUPERFAMILY SSF52540 22 272 4.49E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_14720 be7773557c72d290e4fbfffcaf48dd59 359 SMART SM00382 51 251 8.8E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_14720 be7773557c72d290e4fbfffcaf48dd59 359 Pfam PF00005 ABC transporter 43 201 7.4E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_10750 910d01a484a163082f6acc2e7167e06c 447 SUPERFAMILY SSF158472 185 232 4.84E-5 T 13-10-2018 RPIT_10750 910d01a484a163082f6acc2e7167e06c 447 SUPERFAMILY SSF47384 220 301 5.69E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 RPIT_10750 910d01a484a163082f6acc2e7167e06c 447 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 301 2.9E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIT_10750 910d01a484a163082f6acc2e7167e06c 447 Gene3D G3DSA:3.30.565.10 309 442 6.4E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_10750 910d01a484a163082f6acc2e7167e06c 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 435 1.1E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_10750 910d01a484a163082f6acc2e7167e06c 447 Pfam PF00672 HAMP domain 184 232 3.0E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 RPIT_10750 910d01a484a163082f6acc2e7167e06c 447 SMART SM00387 338 444 1.7E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_10750 910d01a484a163082f6acc2e7167e06c 447 SMART SM00304 183 236 4.0E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 RPIT_10750 910d01a484a163082f6acc2e7167e06c 447 Gene3D G3DSA:1.10.287.130 187 301 1.8E-26 T 13-10-2018 RPIT_10750 910d01a484a163082f6acc2e7167e06c 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 5.3E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_10750 910d01a484a163082f6acc2e7167e06c 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 5.3E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_10750 910d01a484a163082f6acc2e7167e06c 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 422 5.3E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_10750 910d01a484a163082f6acc2e7167e06c 447 SUPERFAMILY SSF55874 291 440 1.57E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_10750 910d01a484a163082f6acc2e7167e06c 447 SMART SM00388 237 302 2.1E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIT_08605 fcc74e74645eacb7012c543e6e683461 114 Gene3D G3DSA:3.30.2010.20 1 113 1.4E-34 T 13-10-2018 IPR038555 Zincin-like metallopeptidase superfamily RPIT_08605 fcc74e74645eacb7012c543e6e683461 114 Pfam PF06262 Zincin-like metallopeptidase 27 113 1.7E-25 T 13-10-2018 IPR010428 Zincin-like metallopeptidase RPIT_08605 fcc74e74645eacb7012c543e6e683461 114 SUPERFAMILY SSF55486 2 113 1.17E-32 T 13-10-2018 RPIT_14595 f3f2033379655e4114c783a06fdbed4d 222 Pfam PF00239 Resolvase, N terminal domain 3 143 1.5E-43 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIT_14595 f3f2033379655e4114c783a06fdbed4d 222 SUPERFAMILY SSF53041 1 142 3.79E-41 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 RPIT_14595 f3f2033379655e4114c783a06fdbed4d 222 ProSitePatterns PS00398 Site-specific recombinases signature 2. 59 71 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RPIT_14595 f3f2033379655e4114c783a06fdbed4d 222 SMART SM00857 2 143 4.0E-54 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIT_14595 f3f2033379655e4114c783a06fdbed4d 222 Gene3D G3DSA:3.40.50.1390 1 132 5.6E-43 T 13-10-2018 RPIT_14595 f3f2033379655e4114c783a06fdbed4d 222 SUPERFAMILY SSF46689 145 187 6.13E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_13590 b5cda8a7fd97d37253a2420984d1d9a5 94 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 6 71 6.6E-25 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor RPIT_13590 b5cda8a7fd97d37253a2420984d1d9a5 94 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 69 5.0E-18 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor RPIT_13590 b5cda8a7fd97d37253a2420984d1d9a5 94 Pfam PF01809 Haemolytic domain 4 69 6.6E-26 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor RPIT_13590 b5cda8a7fd97d37253a2420984d1d9a5 94 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 2 70 21.862 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor RPIT_13590 b5cda8a7fd97d37253a2420984d1d9a5 94 SMART SM01234 2 69 3.1E-35 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor RPIT_03570 5785b10502662a60d829898307ebddca 219 Hamap MF_00013 Octanoyltransferase [lipB]. 4 211 31.299 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 RPIT_03570 5785b10502662a60d829898307ebddca 219 PIRSF PIRSF016262 1 216 1.9E-55 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 RPIT_03570 5785b10502662a60d829898307ebddca 219 Pfam PF03099 Biotin/lipoate A/B protein ligase family 54 160 5.5E-5 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 RPIT_03570 5785b10502662a60d829898307ebddca 219 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 30 187 5.6E-39 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 RPIT_03570 5785b10502662a60d829898307ebddca 219 SUPERFAMILY SSF55681 8 210 4.72E-62 T 13-10-2018 RPIT_03570 5785b10502662a60d829898307ebddca 219 Gene3D G3DSA:3.30.930.10 4 209 4.9E-69 T 13-10-2018 RPIT_03570 5785b10502662a60d829898307ebddca 219 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 126 2.0E-14 T 13-10-2018 RPIT_03570 5785b10502662a60d829898307ebddca 219 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 13-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 RPIT_06865 e72a7384b1fa07661f05e1b47a168ee1 230 SUPERFAMILY SSF52799 3 201 1.7E-23 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like RPIT_06865 e72a7384b1fa07661f05e1b47a168ee1 230 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 126 136 - T 13-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 RPIT_06865 e72a7384b1fa07661f05e1b47a168ee1 230 Pfam PF13350 Tyrosine phosphatase family 17 204 8.5E-22 T 13-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type RPIT_06865 e72a7384b1fa07661f05e1b47a168ee1 230 Gene3D G3DSA:3.90.190.10 5 225 3.6E-26 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like RPIT_07435 c750ca2c4e11b346922d8ffe99006540 751 SUPERFAMILY SSF52540 259 732 6.15E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_07435 c750ca2c4e11b346922d8ffe99006540 751 Pfam PF13361 UvrD-like helicase C-terminal domain 665 729 4.5E-12 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIT_07435 c750ca2c4e11b346922d8ffe99006540 751 Pfam PF13245 AAA domain 275 528 1.8E-13 T 13-10-2018 RPIT_07435 c750ca2c4e11b346922d8ffe99006540 751 Gene3D G3DSA:3.40.50.300 549 743 5.5E-24 T 13-10-2018 RPIT_07435 c750ca2c4e11b346922d8ffe99006540 751 Gene3D G3DSA:3.40.50.300 256 416 3.0E-13 T 13-10-2018 RPIT_07435 c750ca2c4e11b346922d8ffe99006540 751 Gene3D G3DSA:3.40.50.300 423 536 4.5E-9 T 13-10-2018 RPIT_10290 677956181aead9328af781b2baa60387 169 Gene3D G3DSA:3.40.630.30 1 166 1.8E-49 T 13-10-2018 RPIT_10290 677956181aead9328af781b2baa60387 169 Pfam PF13420 Acetyltransferase (GNAT) domain 4 156 2.1E-22 T 13-10-2018 RPIT_10290 677956181aead9328af781b2baa60387 169 SUPERFAMILY SSF55729 3 166 2.53E-35 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_05330 dbe0cbe0d0a6f012e023d6c6bb7d21cb 233 Gene3D G3DSA:3.40.50.2300 2 127 3.7E-38 T 13-10-2018 RPIT_05330 dbe0cbe0d0a6f012e023d6c6bb7d21cb 233 SMART SM00862 152 228 3.6E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_05330 dbe0cbe0d0a6f012e023d6c6bb7d21cb 233 SUPERFAMILY SSF46894 128 227 1.93E-28 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIT_05330 dbe0cbe0d0a6f012e023d6c6bb7d21cb 233 SUPERFAMILY SSF52172 7 125 1.99E-40 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_05330 dbe0cbe0d0a6f012e023d6c6bb7d21cb 233 Gene3D G3DSA:1.10.10.10 130 233 9.9E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_05330 dbe0cbe0d0a6f012e023d6c6bb7d21cb 233 Pfam PF00072 Response regulator receiver domain 10 119 3.4E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_05330 dbe0cbe0d0a6f012e023d6c6bb7d21cb 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 227 1.2E-25 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_05330 dbe0cbe0d0a6f012e023d6c6bb7d21cb 233 SMART SM00448 8 118 1.1E-43 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_04010 2abdcd292465f943b120de7b564c7d82 477 SUPERFAMILY SSF53623 108 323 2.22E-48 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 RPIT_04010 2abdcd292465f943b120de7b564c7d82 477 SUPERFAMILY SSF63418 11 97 2.22E-17 T 13-10-2018 IPR035911 MurE/MurF, N-terminal RPIT_04010 2abdcd292465f943b120de7b564c7d82 477 Gene3D G3DSA:3.40.1390.10 5 84 1.6E-17 T 13-10-2018 RPIT_04010 2abdcd292465f943b120de7b564c7d82 477 Pfam PF02875 Mur ligase family, glutamate ligase domain 331 418 1.2E-16 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 RPIT_04010 2abdcd292465f943b120de7b564c7d82 477 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 33 468 1.9E-103 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_04010 2abdcd292465f943b120de7b564c7d82 477 Pfam PF08245 Mur ligase middle domain 112 307 1.0E-37 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 RPIT_04010 2abdcd292465f943b120de7b564c7d82 477 Gene3D G3DSA:3.40.1190.10 85 323 3.5E-61 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 RPIT_04010 2abdcd292465f943b120de7b564c7d82 477 SUPERFAMILY SSF53244 330 469 1.47E-28 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RPIT_04010 2abdcd292465f943b120de7b564c7d82 477 Gene3D G3DSA:3.90.190.20 327 475 1.7E-35 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RPIT_04010 2abdcd292465f943b120de7b564c7d82 477 Pfam PF01225 Mur ligase family, catalytic domain 31 75 9.3E-7 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 RPIT_04010 2abdcd292465f943b120de7b564c7d82 477 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 10 470 28.165 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_12025 c8e02bc0d173d66fe810688fb5ed7c84 305 PIRSF PIRSF035042 17 302 1.4E-46 T 13-10-2018 IPR010350 Thioredoxin-like ferredoxin, bacteria RPIT_12025 c8e02bc0d173d66fe810688fb5ed7c84 305 Gene3D G3DSA:3.40.30.10 139 221 1.2E-6 T 13-10-2018 RPIT_12025 c8e02bc0d173d66fe810688fb5ed7c84 305 Pfam PF06999 Sucrase/ferredoxin-like 137 223 1.2E-16 T 13-10-2018 IPR009737 Thioredoxin-like ferredoxin RPIT_12025 c8e02bc0d173d66fe810688fb5ed7c84 305 SUPERFAMILY SSF52833 138 216 9.62E-10 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_11580 bacd3f4a7799506871a4fade1dd9cf63 203 SUPERFAMILY SSF55136 114 201 1.44E-7 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily RPIT_11580 bacd3f4a7799506871a4fade1dd9cf63 203 Gene3D G3DSA:3.20.80.10 1 201 1.6E-67 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily RPIT_11580 bacd3f4a7799506871a4fade1dd9cf63 203 PIRSF PIRSF031644 1 203 5.0E-56 T 13-10-2018 IPR008319 Uncharacterised conserved protein UCP031644 RPIT_11580 bacd3f4a7799506871a4fade1dd9cf63 203 Pfam PF06445 GyrI-like small molecule binding domain 24 197 6.5E-23 T 13-10-2018 IPR029442 GyrI-like small molecule binding domain RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 SMART SM00089 447 526 0.48 T 13-10-2018 IPR022409 PKD/Chitinase domain RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 SMART SM00089 896 979 2.0E-5 T 13-10-2018 IPR022409 PKD/Chitinase domain RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 SMART SM00089 1067 1146 2.4E-11 T 13-10-2018 IPR022409 PKD/Chitinase domain RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 SMART SM00089 980 1062 0.13 T 13-10-2018 IPR022409 PKD/Chitinase domain RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 SMART SM00089 809 891 2.5E-8 T 13-10-2018 IPR022409 PKD/Chitinase domain RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 SUPERFAMILY SSF49299 438 512 3.66E-9 T 13-10-2018 IPR035986 PKD domain superfamily RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 Pfam PF17517 IgGFc binding protein 1258 1529 2.6E-51 T 13-10-2018 IPR035234 IgGFc-binding protein, N-terminal RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 SUPERFAMILY SSF49299 1029 1136 7.85E-15 T 13-10-2018 IPR035986 PKD domain superfamily RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 Pfam PF00801 PKD domain 826 880 4.9E-7 T 13-10-2018 IPR000601 PKD domain RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 Pfam PF00801 PKD domain 1071 1133 9.6E-10 T 13-10-2018 IPR000601 PKD domain RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 Pfam PF00801 PKD domain 901 966 1.5E-5 T 13-10-2018 IPR000601 PKD domain RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 Gene3D G3DSA:2.60.40.10 1060 1143 9.6E-15 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 Gene3D G3DSA:2.60.40.10 440 527 6.4E-7 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 Gene3D G3DSA:2.60.40.10 810 889 6.2E-14 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 Gene3D G3DSA:2.60.40.10 1551 1638 7.3E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 Gene3D G3DSA:2.60.40.10 1736 1830 2.0E-7 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 Gene3D G3DSA:2.60.40.10 981 1059 4.6E-8 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 Gene3D G3DSA:2.60.40.10 890 978 3.1E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 SUPERFAMILY SSF49299 861 970 1.57E-12 T 13-10-2018 IPR035986 PKD domain superfamily RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 SUPERFAMILY SSF49373 1742 1829 3.4E-8 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 SUPERFAMILY SSF49299 810 890 1.23E-13 T 13-10-2018 IPR035986 PKD domain superfamily RPIT_12815 48e49d47326bb9332690eaab94f025db 2166 SUPERFAMILY SSF49373 1563 1638 1.15E-6 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments RPIT_11595 82debdf28b6b164369341febc1bb59d5 179 Gene3D G3DSA:3.40.50.2020 1 179 2.1E-50 T 13-10-2018 RPIT_11595 82debdf28b6b164369341febc1bb59d5 179 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 15 169 8.3E-39 T 13-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RPIT_11595 82debdf28b6b164369341febc1bb59d5 179 SUPERFAMILY SSF53271 7 176 4.59E-36 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like RPIT_11595 82debdf28b6b164369341febc1bb59d5 179 Pfam PF00156 Phosphoribosyl transferase domain 48 160 2.7E-12 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIT_11595 82debdf28b6b164369341febc1bb59d5 179 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 179 25.298 T 13-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RPIT_12695 728dd8806c9e238d9299107f8bbb5693 495 SUPERFAMILY SSF81606 4 234 9.29E-55 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 RPIT_12695 728dd8806c9e238d9299107f8bbb5693 495 SMART SM00331 11 237 2.2E-30 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 RPIT_12695 728dd8806c9e238d9299107f8bbb5693 495 Pfam PF13672 Protein phosphatase 2C 28 223 2.8E-10 T 13-10-2018 RPIT_12695 728dd8806c9e238d9299107f8bbb5693 495 Gene3D G3DSA:3.60.40.10 2 238 1.3E-56 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 RPIT_12695 728dd8806c9e238d9299107f8bbb5693 495 SMART SM00332 2 235 1.6E-14 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 RPIT_13695 32e1bcc3dac1c557a8abfcf3c3fe2bb4 217 Gene3D G3DSA:1.20.144.10 136 208 1.4E-6 T 13-10-2018 RPIT_13695 32e1bcc3dac1c557a8abfcf3c3fe2bb4 217 Pfam PF14378 PAP2 superfamily 88 199 1.3E-7 T 13-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 RPIT_13695 32e1bcc3dac1c557a8abfcf3c3fe2bb4 217 SUPERFAMILY SSF48317 70 201 4.32E-6 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily RPIT_06090 d8e17c58c47fe6c59a5cdd6126535601 454 Hamap MF_00195 GTPase Der [der]. 18 449 35.72 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 RPIT_06090 d8e17c58c47fe6c59a5cdd6126535601 454 Gene3D G3DSA:3.40.50.300 190 362 1.2E-46 T 13-10-2018 RPIT_06090 d8e17c58c47fe6c59a5cdd6126535601 454 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 19 446 1.3E-161 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 RPIT_06090 d8e17c58c47fe6c59a5cdd6126535601 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 21 140 1.5E-23 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RPIT_06090 d8e17c58c47fe6c59a5cdd6126535601 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 193 359 9.6E-26 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RPIT_06090 d8e17c58c47fe6c59a5cdd6126535601 454 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 368 446 2.8E-22 T 13-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like RPIT_06090 d8e17c58c47fe6c59a5cdd6126535601 454 Pfam PF01926 50S ribosome-binding GTPase 194 312 3.5E-23 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_06090 d8e17c58c47fe6c59a5cdd6126535601 454 Pfam PF01926 50S ribosome-binding GTPase 21 135 5.0E-26 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_06090 d8e17c58c47fe6c59a5cdd6126535601 454 SUPERFAMILY SSF52540 153 452 2.99E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06090 d8e17c58c47fe6c59a5cdd6126535601 454 Gene3D G3DSA:3.30.300.20 368 449 3.3E-23 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta RPIT_06090 d8e17c58c47fe6c59a5cdd6126535601 454 SMART SM00382 191 334 0.092 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_06090 d8e17c58c47fe6c59a5cdd6126535601 454 SMART SM00382 17 155 0.061 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_06090 d8e17c58c47fe6c59a5cdd6126535601 454 PIRSF PIRSF006485 17 454 8.0E-163 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 RPIT_06090 d8e17c58c47fe6c59a5cdd6126535601 454 SUPERFAMILY SSF52540 21 185 8.46E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06090 d8e17c58c47fe6c59a5cdd6126535601 454 Gene3D G3DSA:3.40.50.300 16 177 4.8E-45 T 13-10-2018 RPIT_06090 d8e17c58c47fe6c59a5cdd6126535601 454 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 217 235 2.0E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_06090 d8e17c58c47fe6c59a5cdd6126535601 454 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 195 215 2.0E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_06090 d8e17c58c47fe6c59a5cdd6126535601 454 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 244 259 2.0E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_09485 033b1748d2cc6becf7151fb5aa660bcd 290 Pfam PF08044 Domain of unknown function (DUF1707) 4 56 7.3E-12 T 13-10-2018 IPR012551 Protein of unknown function DUF1707 RPIT_11845 ea19d367f16165c7974645c0e37dcade 280 Gene3D G3DSA:3.40.1190.20 1 279 3.5E-89 T 13-10-2018 IPR029056 Ribokinase-like RPIT_11845 ea19d367f16165c7974645c0e37dcade 280 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 7 273 1.1E-81 T 13-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RPIT_11845 ea19d367f16165c7974645c0e37dcade 280 SUPERFAMILY SSF53613 2 259 1.87E-64 T 13-10-2018 IPR029056 Ribokinase-like RPIT_11845 ea19d367f16165c7974645c0e37dcade 280 Pfam PF08543 Phosphomethylpyrimidine kinase 13 271 2.2E-80 T 13-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 RPIT_11385 15313d54ad193f2903de33599927b4b6 768 Gene3D G3DSA:3.20.20.300 11 370 3.9E-101 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 RPIT_11385 15313d54ad193f2903de33599927b4b6 768 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 53 350 2.3E-72 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RPIT_11385 15313d54ad193f2903de33599927b4b6 768 PRINTS PR00133 Glycosyl hydrolase family 3 signature 272 290 4.7E-21 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RPIT_11385 15313d54ad193f2903de33599927b4b6 768 PRINTS PR00133 Glycosyl hydrolase family 3 signature 101 117 4.7E-21 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RPIT_11385 15313d54ad193f2903de33599927b4b6 768 PRINTS PR00133 Glycosyl hydrolase family 3 signature 170 186 4.7E-21 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RPIT_11385 15313d54ad193f2903de33599927b4b6 768 PRINTS PR00133 Glycosyl hydrolase family 3 signature 124 143 4.7E-21 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RPIT_11385 15313d54ad193f2903de33599927b4b6 768 PRINTS PR00133 Glycosyl hydrolase family 3 signature 201 217 4.7E-21 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RPIT_11385 15313d54ad193f2903de33599927b4b6 768 Pfam PF14310 Fibronectin type III-like domain 665 734 6.4E-18 T 13-10-2018 IPR026891 Fibronectin type III-like domain RPIT_11385 15313d54ad193f2903de33599927b4b6 768 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 391 628 1.7E-45 T 13-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 RPIT_11385 15313d54ad193f2903de33599927b4b6 768 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 272 289 - T 13-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 RPIT_11385 15313d54ad193f2903de33599927b4b6 768 SUPERFAMILY SSF52279 391 631 8.24E-44 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 RPIT_11385 15313d54ad193f2903de33599927b4b6 768 SMART SM01217 665 734 2.1E-25 T 13-10-2018 IPR026891 Fibronectin type III-like domain RPIT_11385 15313d54ad193f2903de33599927b4b6 768 Gene3D G3DSA:3.40.50.1700 376 629 4.7E-58 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 RPIT_11385 15313d54ad193f2903de33599927b4b6 768 SUPERFAMILY SSF51445 3 390 2.42E-96 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_11385 15313d54ad193f2903de33599927b4b6 768 Gene3D G3DSA:2.60.40.10 633 751 8.7E-33 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_12260 39c1d2bc7a2bf3f92ed433f130b4ba2d 157 Gene3D G3DSA:3.40.140.10 3 156 3.2E-53 T 13-10-2018 RPIT_12260 39c1d2bc7a2bf3f92ed433f130b4ba2d 157 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 92 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RPIT_12260 39c1d2bc7a2bf3f92ed433f130b4ba2d 157 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 9 151 46.917 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 RPIT_12260 39c1d2bc7a2bf3f92ed433f130b4ba2d 157 SUPERFAMILY SSF53927 6 151 9.37E-50 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 RPIT_12260 39c1d2bc7a2bf3f92ed433f130b4ba2d 157 Pfam PF14437 MafB19-like deaminase 5 151 1.3E-33 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 RPIT_13875 43d80f9b06944dee3d0fd550be783b04 281 Gene3D G3DSA:3.40.50.970 3 279 1.7E-89 T 13-10-2018 RPIT_13875 43d80f9b06944dee3d0fd550be783b04 281 SUPERFAMILY SSF52518 5 265 2.82E-76 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_13875 43d80f9b06944dee3d0fd550be783b04 281 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 10 238 1.4E-42 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RPIT_08995 8da8683647b6835bd46e55f6595544ce 151 Gene3D G3DSA:1.10.10.10 7 150 9.2E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_08995 8da8683647b6835bd46e55f6595544ce 151 SUPERFAMILY SSF46785 7 148 6.15E-29 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_08995 8da8683647b6835bd46e55f6595544ce 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 3.2E-5 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_08995 8da8683647b6835bd46e55f6595544ce 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 3.2E-5 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_08995 8da8683647b6835bd46e55f6595544ce 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 3.2E-5 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_08995 8da8683647b6835bd46e55f6595544ce 151 SMART SM00347 33 135 1.7E-15 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_08995 8da8683647b6835bd46e55f6595544ce 151 Pfam PF12802 MarR family 38 99 1.9E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_05160 4960cc06bd7c9eb22243f10115dd4a31 354 PIRSF PIRSF002849 2 333 2.0E-129 T 13-10-2018 RPIT_05160 4960cc06bd7c9eb22243f10115dd4a31 354 SUPERFAMILY SSF52540 11 303 1.27E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_05160 4960cc06bd7c9eb22243f10115dd4a31 354 Gene3D G3DSA:1.10.8.300 213 328 2.5E-34 T 13-10-2018 RPIT_05160 4960cc06bd7c9eb22243f10115dd4a31 354 Gene3D G3DSA:3.40.50.300 16 212 2.1E-46 T 13-10-2018 RPIT_05160 4960cc06bd7c9eb22243f10115dd4a31 354 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 52 182 5.3E-60 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 RPIT_14740 a06c1faf9414c0a120cf579201c0aeb0 464 PIRSF PIRSF000538 1 431 3.6E-78 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RPIT_14740 a06c1faf9414c0a120cf579201c0aeb0 464 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 240 422 1.3E-26 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RPIT_14740 a06c1faf9414c0a120cf579201c0aeb0 464 SUPERFAMILY SSF53067 236 456 2.39E-42 T 13-10-2018 RPIT_14740 a06c1faf9414c0a120cf579201c0aeb0 464 TIGRFAM TIGR01312 XylB: xylulokinase 6 454 1.1E-115 T 13-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 RPIT_14740 a06c1faf9414c0a120cf579201c0aeb0 464 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 207 8.6E-40 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RPIT_14740 a06c1faf9414c0a120cf579201c0aeb0 464 Gene3D G3DSA:3.30.420.40 233 458 1.1E-66 T 13-10-2018 RPIT_14740 a06c1faf9414c0a120cf579201c0aeb0 464 Gene3D G3DSA:3.30.420.40 1 232 5.9E-86 T 13-10-2018 RPIT_14740 a06c1faf9414c0a120cf579201c0aeb0 464 SUPERFAMILY SSF53067 4 233 1.88E-43 T 13-10-2018 RPIT_14715 3cda93209618b792cbe859cbcd9b467d 336 SUPERFAMILY SSF52540 7 256 2.66E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_14715 3cda93209618b792cbe859cbcd9b467d 336 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_14715 3cda93209618b792cbe859cbcd9b467d 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 326 7.8E-25 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIT_14715 3cda93209618b792cbe859cbcd9b467d 336 SMART SM00382 42 234 6.3E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_14715 3cda93209618b792cbe859cbcd9b467d 336 Pfam PF00005 ABC transporter 34 184 4.9E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_14715 3cda93209618b792cbe859cbcd9b467d 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 303 4.3E-16 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIT_14715 3cda93209618b792cbe859cbcd9b467d 336 Gene3D G3DSA:3.40.50.300 4 335 1.2E-97 T 13-10-2018 RPIT_12520 4b6626a3be5ab62d3b13f10baa17fe27 199 SMART SM00855 2 153 2.1E-20 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_12520 4b6626a3be5ab62d3b13f10baa17fe27 199 PIRSF PIRSF000709 2 154 4.9E-7 T 13-10-2018 RPIT_12520 4b6626a3be5ab62d3b13f10baa17fe27 199 SUPERFAMILY SSF53254 1 193 9.42E-38 T 13-10-2018 IPR029033 Histidine phosphatase superfamily RPIT_12520 4b6626a3be5ab62d3b13f10baa17fe27 199 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 13-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 RPIT_12520 4b6626a3be5ab62d3b13f10baa17fe27 199 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 192 1.6E-39 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_12520 4b6626a3be5ab62d3b13f10baa17fe27 199 Gene3D G3DSA:3.40.50.1240 1 190 1.0E-36 T 13-10-2018 IPR029033 Histidine phosphatase superfamily RPIT_04005 068062dda8d87bd52633234728eb7b1c 492 Gene3D G3DSA:3.40.1190.10 89 325 1.3E-68 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 RPIT_04005 068062dda8d87bd52633234728eb7b1c 492 Pfam PF01225 Mur ligase family, catalytic domain 10 83 3.1E-11 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 RPIT_04005 068062dda8d87bd52633234728eb7b1c 492 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 476 28.264 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 RPIT_04005 068062dda8d87bd52633234728eb7b1c 492 SUPERFAMILY SSF63418 5 87 4.32E-20 T 13-10-2018 IPR035911 MurE/MurF, N-terminal RPIT_04005 068062dda8d87bd52633234728eb7b1c 492 Pfam PF02875 Mur ligase family, glutamate ligase domain 324 407 2.5E-15 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 RPIT_04005 068062dda8d87bd52633234728eb7b1c 492 Gene3D G3DSA:3.40.1390.10 1 88 6.0E-28 T 13-10-2018 RPIT_04005 068062dda8d87bd52633234728eb7b1c 492 Pfam PF08245 Mur ligase middle domain 98 304 6.6E-40 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 RPIT_04005 068062dda8d87bd52633234728eb7b1c 492 SUPERFAMILY SSF53244 324 477 7.59E-36 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RPIT_04005 068062dda8d87bd52633234728eb7b1c 492 Gene3D G3DSA:3.90.190.20 326 482 3.4E-45 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RPIT_04005 068062dda8d87bd52633234728eb7b1c 492 SUPERFAMILY SSF53623 89 320 3.4E-58 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 RPIT_04005 068062dda8d87bd52633234728eb7b1c 492 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 8 475 5.2E-129 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 RPIT_03415 dfd4f8ba44b01ed16a718edf0d4e8e1c 204 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 90 192 6.8E-35 T 13-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 RPIT_03415 dfd4f8ba44b01ed16a718edf0d4e8e1c 204 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 7.4E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 RPIT_03415 dfd4f8ba44b01ed16a718edf0d4e8e1c 204 PRINTS PR01703 Manganese superoxide dismutase signature 119 127 7.4E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 RPIT_03415 dfd4f8ba44b01ed16a718edf0d4e8e1c 204 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 7.4E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 RPIT_03415 dfd4f8ba44b01ed16a718edf0d4e8e1c 204 PRINTS PR01703 Manganese superoxide dismutase signature 66 79 7.4E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 RPIT_03415 dfd4f8ba44b01ed16a718edf0d4e8e1c 204 PRINTS PR01703 Manganese superoxide dismutase signature 157 169 7.4E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 RPIT_03415 dfd4f8ba44b01ed16a718edf0d4e8e1c 204 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 159 166 - T 13-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 RPIT_03415 dfd4f8ba44b01ed16a718edf0d4e8e1c 204 Gene3D G3DSA:1.10.287.990 20 83 4.7E-27 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 RPIT_03415 dfd4f8ba44b01ed16a718edf0d4e8e1c 204 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 83 9.3E-31 T 13-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 RPIT_03415 dfd4f8ba44b01ed16a718edf0d4e8e1c 204 PIRSF PIRSF000349 1 202 2.1E-76 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 RPIT_03415 dfd4f8ba44b01ed16a718edf0d4e8e1c 204 SUPERFAMILY SSF46609 1 88 5.76E-32 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 RPIT_03415 dfd4f8ba44b01ed16a718edf0d4e8e1c 204 SUPERFAMILY SSF54719 82 196 7.46E-43 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 RPIT_03415 dfd4f8ba44b01ed16a718edf0d4e8e1c 204 Gene3D G3DSA:2.40.500.20 84 204 1.0E-44 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 RPIT_00720 846c7305ad66dbdd84fb76aed86e2a0a 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 224 9.3E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_00720 846c7305ad66dbdd84fb76aed86e2a0a 226 Gene3D G3DSA:1.10.3720.10 11 226 1.7E-47 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_00720 846c7305ad66dbdd84fb76aed86e2a0a 226 SUPERFAMILY SSF161098 16 210 5.36E-42 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_04625 9a1cac03d9b05429d76f4b22a4f3f1cd 159 SUPERFAMILY SSF55729 1 130 1.2E-23 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_04625 9a1cac03d9b05429d76f4b22a4f3f1cd 159 Pfam PF00583 Acetyltransferase (GNAT) family 29 118 1.9E-14 T 13-10-2018 IPR000182 GNAT domain RPIT_04625 9a1cac03d9b05429d76f4b22a4f3f1cd 159 Gene3D G3DSA:3.40.630.30 3 156 2.7E-23 T 13-10-2018 RPIT_08660 5a97c1f1c19a62cda156c372c138c943 207 SUPERFAMILY SSF52540 1 200 4.22E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_08660 5a97c1f1c19a62cda156c372c138c943 207 ProSitePatterns PS00211 ABC transporters family signature. 106 120 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_08660 5a97c1f1c19a62cda156c372c138c943 207 Gene3D G3DSA:3.40.50.300 1 205 5.9E-69 T 13-10-2018 RPIT_08660 5a97c1f1c19a62cda156c372c138c943 207 Pfam PF00005 ABC transporter 1 134 3.2E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_08660 5a97c1f1c19a62cda156c372c138c943 207 SMART SM00382 1 178 4.9E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_08710 5522e5000170cf5a2faba0638f224628 749 Gene3D G3DSA:2.40.50.140 54 160 5.5E-7 T 13-10-2018 RPIT_08710 5522e5000170cf5a2faba0638f224628 749 SMART SM00490 554 639 1.9E-19 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_08710 5522e5000170cf5a2faba0638f224628 749 SUPERFAMILY SSF52540 318 696 7.45E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_08710 5522e5000170cf5a2faba0638f224628 749 SUPERFAMILY SSF50249 18 208 2.23E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_08710 5522e5000170cf5a2faba0638f224628 749 Gene3D G3DSA:3.40.50.300 494 680 4.7E-49 T 13-10-2018 RPIT_08710 5522e5000170cf5a2faba0638f224628 749 SMART SM00487 293 494 1.0E-28 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIT_08710 5522e5000170cf5a2faba0638f224628 749 Pfam PF17191 RecG wedge domain 19 102 9.9E-6 T 13-10-2018 IPR033454 RecG, wedge domain RPIT_08710 5522e5000170cf5a2faba0638f224628 749 Pfam PF00270 DEAD/DEAH box helicase 321 470 4.7E-14 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIT_08710 5522e5000170cf5a2faba0638f224628 749 SUPERFAMILY SSF52540 213 488 1.34E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_08710 5522e5000170cf5a2faba0638f224628 749 Pfam PF00271 Helicase conserved C-terminal domain 520 639 1.6E-16 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_08710 5522e5000170cf5a2faba0638f224628 749 Gene3D G3DSA:3.40.50.300 243 485 2.1E-76 T 13-10-2018 RPIT_03980 65dc054c045686fd7a1e53a9fa2ef3fc 335 Gene3D G3DSA:1.10.8.300 224 329 1.7E-30 T 13-10-2018 RPIT_03980 65dc054c045686fd7a1e53a9fa2ef3fc 335 SUPERFAMILY SSF52540 37 304 3.73E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_03980 65dc054c045686fd7a1e53a9fa2ef3fc 335 PIRSF PIRSF002849 2 334 1.9E-128 T 13-10-2018 RPIT_03980 65dc054c045686fd7a1e53a9fa2ef3fc 335 Gene3D G3DSA:3.40.50.300 21 223 2.9E-42 T 13-10-2018 RPIT_03980 65dc054c045686fd7a1e53a9fa2ef3fc 335 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 60 189 5.3E-62 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 RPIT_10945 c37b30608e2baefa98e54bb811214218 299 Gene3D G3DSA:3.30.230.10 1 165 7.6E-56 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIT_10945 c37b30608e2baefa98e54bb811214218 299 Pfam PF00288 GHMP kinases N terminal domain 93 150 1.6E-7 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 RPIT_10945 c37b30608e2baefa98e54bb811214218 299 SUPERFAMILY SSF54211 4 162 9.87E-39 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RPIT_10945 c37b30608e2baefa98e54bb811214218 299 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 262 3.8E-55 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 RPIT_10945 c37b30608e2baefa98e54bb811214218 299 Pfam PF08544 GHMP kinases C terminal 207 277 7.1E-7 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain RPIT_10945 c37b30608e2baefa98e54bb811214218 299 PIRSF PIRSF010376 3 296 8.5E-72 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 RPIT_10945 c37b30608e2baefa98e54bb811214218 299 SUPERFAMILY SSF55060 170 277 1.3E-18 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily RPIT_10945 c37b30608e2baefa98e54bb811214218 299 Gene3D G3DSA:3.30.70.890 167 299 2.5E-33 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily RPIT_10945 c37b30608e2baefa98e54bb811214218 299 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 5 288 29.514 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 RPIT_03580 a954631833a2de88de75ec5cc5597a35 599 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 RPIT_03580 a954631833a2de88de75ec5cc5597a35 599 Gene3D G3DSA:4.10.320.10 285 329 5.7E-17 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 RPIT_03580 a954631833a2de88de75ec5cc5597a35 599 SUPERFAMILY SSF47005 284 327 5.36E-13 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 RPIT_03580 a954631833a2de88de75ec5cc5597a35 599 Gene3D G3DSA:2.40.50.100 1 102 1.3E-26 T 13-10-2018 RPIT_03580 a954631833a2de88de75ec5cc5597a35 599 Gene3D G3DSA:2.40.50.100 131 234 1.7E-26 T 13-10-2018 RPIT_03580 a954631833a2de88de75ec5cc5597a35 599 SUPERFAMILY SSF52777 352 590 6.67E-79 T 13-10-2018 RPIT_03580 a954631833a2de88de75ec5cc5597a35 599 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 363 590 1.6E-76 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 RPIT_03580 a954631833a2de88de75ec5cc5597a35 599 Gene3D G3DSA:3.30.559.10 342 593 7.4E-85 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 RPIT_03580 a954631833a2de88de75ec5cc5597a35 599 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 162 191 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 RPIT_03580 a954631833a2de88de75ec5cc5597a35 599 SUPERFAMILY SSF51230 138 230 3.14E-26 T 13-10-2018 IPR011053 Single hybrid motif RPIT_03580 a954631833a2de88de75ec5cc5597a35 599 SUPERFAMILY SSF51230 1 92 5.5E-27 T 13-10-2018 IPR011053 Single hybrid motif RPIT_03580 a954631833a2de88de75ec5cc5597a35 599 TIGRFAM TIGR02927 SucB_Actino: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 1 599 1.5E-241 T 13-10-2018 IPR014276 2-oxoglutarate dehydrogenase, E2 component KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 RPIT_03580 a954631833a2de88de75ec5cc5597a35 599 Pfam PF02817 e3 binding domain 291 324 4.9E-16 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 RPIT_03580 a954631833a2de88de75ec5cc5597a35 599 Pfam PF00364 Biotin-requiring enzyme 139 211 1.3E-20 T 13-10-2018 IPR000089 Biotin/lipoyl attachment RPIT_03580 a954631833a2de88de75ec5cc5597a35 599 Pfam PF00364 Biotin-requiring enzyme 4 76 2.3E-21 T 13-10-2018 IPR000089 Biotin/lipoyl attachment RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 SUPERFAMILY SSF81653 230 325 1.96E-24 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 190 717 3.5E-159 T 13-10-2018 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 SUPERFAMILY SSF81665 195 694 2.48E-11 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 Pfam PF00702 haloacid dehalogenase-like hydrolase 421 628 5.9E-45 T 13-10-2018 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 37 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 Pfam PF00403 Heavy-metal-associated domain 7 64 1.2E-11 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 Gene3D G3DSA:3.40.1110.10 436 546 1.7E-81 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 SUPERFAMILY SSF56784 423 714 1.56E-57 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 645 670 1.5E-9 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 586 602 1.5E-9 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 614 630 1.5E-9 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 Gene3D G3DSA:2.70.150.20 213 329 6.1E-36 T 13-10-2018 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 198 698 9.1E-91 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 Gene3D G3DSA:3.40.50.1000 419 664 1.7E-81 T 13-10-2018 IPR023214 HAD superfamily RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 Pfam PF00122 E1-E2 ATPase 228 403 2.1E-53 T 13-10-2018 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 144 716 1.8E-179 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 193 716 2.6E-120 T 13-10-2018 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 Gene3D G3DSA:3.30.70.100 5 69 9.6E-19 T 13-10-2018 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 614 633 2.5E-22 T 13-10-2018 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 275 289 2.5E-22 T 13-10-2018 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 561 571 2.5E-22 T 13-10-2018 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 425 439 2.5E-22 T 13-10-2018 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 637 649 2.5E-22 T 13-10-2018 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 SUPERFAMILY SSF55008 4 71 1.1E-18 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 RPIT_12950 b9b96f634f1effeb1fd7f2e40fbbef0b 729 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 427 433 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 Gene3D G3DSA:3.30.390.30 344 464 1.8E-29 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 319 6.2E-58 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 1.0E-61 T 13-10-2018 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 1.0E-61 T 13-10-2018 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 448 1.0E-61 T 13-10-2018 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 256 270 1.0E-61 T 13-10-2018 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.0E-61 T 13-10-2018 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.0E-61 T 13-10-2018 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 1.0E-61 T 13-10-2018 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 1.0E-61 T 13-10-2018 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 1.0E-61 T 13-10-2018 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 453 9.2E-22 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 7.0E-31 T 13-10-2018 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 7.0E-31 T 13-10-2018 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 271 7.0E-31 T 13-10-2018 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 7.0E-31 T 13-10-2018 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 7.0E-31 T 13-10-2018 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 PIRSF PIRSF000350 1 458 8.1E-65 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 SUPERFAMILY SSF51905 2 329 1.62E-50 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 Gene3D G3DSA:3.50.50.60 5 324 4.9E-95 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 Gene3D G3DSA:3.50.50.60 149 265 4.9E-95 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_03585 419b5e9c707a317ed538b70331743ab3 466 SUPERFAMILY SSF55424 345 464 2.23E-25 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 RPIT_01570 81776560309d0e2832fcbc23306dbbb9 188 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 11 185 1.8E-68 T 13-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 RPIT_01570 81776560309d0e2832fcbc23306dbbb9 188 Pfam PF01227 GTP cyclohydrolase I 10 185 4.8E-72 T 13-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 RPIT_01570 81776560309d0e2832fcbc23306dbbb9 188 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 4 186 39.072 T 13-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 RPIT_01570 81776560309d0e2832fcbc23306dbbb9 188 Gene3D G3DSA:3.30.1130.10 54 186 6.6E-57 T 13-10-2018 RPIT_01570 81776560309d0e2832fcbc23306dbbb9 188 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 64 80 - T 13-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 RPIT_01570 81776560309d0e2832fcbc23306dbbb9 188 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 114 124 - T 13-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 RPIT_01570 81776560309d0e2832fcbc23306dbbb9 188 Gene3D G3DSA:1.10.286.10 1 52 1.5E-17 T 13-10-2018 RPIT_01570 81776560309d0e2832fcbc23306dbbb9 188 SUPERFAMILY SSF55620 4 185 2.3E-70 T 13-10-2018 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 217 258 1.0E-6 T 13-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 3 203 1.4E-64 T 13-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 2 292 32.672 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 Gene3D G3DSA:3.40.50.10090 424 539 9.0E-18 T 13-10-2018 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 Pfam PF02602 Uroporphyrinogen-III synthase HemD 325 534 3.3E-39 T 13-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 222 238 - T 13-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 SUPERFAMILY SSF53850 1 209 5.43E-64 T 13-10-2018 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 PRINTS PR00151 Porphobilinogen deaminase signature 221 238 7.7E-28 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 PRINTS PR00151 Porphobilinogen deaminase signature 39 59 7.7E-28 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 PRINTS PR00151 Porphobilinogen deaminase signature 118 135 7.7E-28 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 PRINTS PR00151 Porphobilinogen deaminase signature 70 89 7.7E-28 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 PRINTS PR00151 Porphobilinogen deaminase signature 137 154 7.7E-28 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 Gene3D G3DSA:3.40.50.10090 305 423 7.0E-17 T 13-10-2018 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 Gene3D G3DSA:3.40.190.10 3 205 3.9E-70 T 13-10-2018 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 3 242 4.8E-82 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 SUPERFAMILY SSF69618 317 539 2.22E-41 T 13-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 SUPERFAMILY SSF54782 211 287 1.57E-10 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 Gene3D G3DSA:3.40.190.10 94 190 3.9E-70 T 13-10-2018 RPIT_04730 b60e6ba06587156ed57eb9e79fa01224 544 Gene3D G3DSA:3.30.160.40 212 289 5.2E-9 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_05625 6cd742dfb8a89e9c1093cd1a73b671b5 429 Gene3D G3DSA:1.10.150.80 344 429 4.6E-11 T 13-10-2018 RPIT_05625 6cd742dfb8a89e9c1093cd1a73b671b5 429 Gene3D G3DSA:1.10.150.80 236 336 4.2E-20 T 13-10-2018 RPIT_05625 6cd742dfb8a89e9c1093cd1a73b671b5 429 Gene3D G3DSA:3.30.420.10 24 233 4.1E-65 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 RPIT_05625 6cd742dfb8a89e9c1093cd1a73b671b5 429 SMART SM00474 39 210 3.6E-35 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RPIT_05625 6cd742dfb8a89e9c1093cd1a73b671b5 429 Pfam PF01612 3'-5' exonuclease 42 209 1.4E-29 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RPIT_05625 6cd742dfb8a89e9c1093cd1a73b671b5 429 SUPERFAMILY SSF53098 41 246 3.66E-48 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily RPIT_05625 6cd742dfb8a89e9c1093cd1a73b671b5 429 Pfam PF00570 HRDC domain 256 323 3.3E-9 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 RPIT_05625 6cd742dfb8a89e9c1093cd1a73b671b5 429 SUPERFAMILY SSF47819 238 341 7.85E-16 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 RPIT_11810 562891c3736de5a60902b31d986e5b66 140 Gene3D G3DSA:3.30.428.10 2 140 4.4E-35 T 13-10-2018 IPR036265 HIT-like superfamily RPIT_11810 562891c3736de5a60902b31d986e5b66 140 Pfam PF01230 HIT domain 17 107 3.0E-21 T 13-10-2018 IPR001310 Histidine triad (HIT) protein RPIT_11810 562891c3736de5a60902b31d986e5b66 140 SUPERFAMILY SSF54197 12 139 1.44E-35 T 13-10-2018 IPR036265 HIT-like superfamily RPIT_11810 562891c3736de5a60902b31d986e5b66 140 PRINTS PR00332 Histidine triad family signature 29 47 7.5E-8 T 13-10-2018 IPR001310 Histidine triad (HIT) protein RPIT_11810 562891c3736de5a60902b31d986e5b66 140 PRINTS PR00332 Histidine triad family signature 8 24 7.5E-8 T 13-10-2018 IPR001310 Histidine triad (HIT) protein RPIT_11810 562891c3736de5a60902b31d986e5b66 140 PRINTS PR00332 Histidine triad family signature 94 104 7.5E-8 T 13-10-2018 IPR001310 Histidine triad (HIT) protein RPIT_13340 7c46d2a31045fef951b325203e648461 255 SUPERFAMILY SSF56112 7 242 5.95E-28 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily RPIT_13340 7c46d2a31045fef951b325203e648461 255 Gene3D G3DSA:1.20.1270.240 78 242 1.1E-52 T 13-10-2018 RPIT_13340 7c46d2a31045fef951b325203e648461 255 Pfam PF03881 Fructosamine kinase 13 250 1.1E-27 T 13-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 RPIT_13340 7c46d2a31045fef951b325203e648461 255 PIRSF PIRSF006221 1 255 2.4E-41 T 13-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 RPIT_13340 7c46d2a31045fef951b325203e648461 255 Gene3D G3DSA:1.10.510.10 57 218 1.1E-52 T 13-10-2018 RPIT_07945 21e2fc6c2828f8aaf980a6278323de2b 350 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 331 4.1E-84 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RPIT_07945 21e2fc6c2828f8aaf980a6278323de2b 350 SUPERFAMILY SSF53659 3 349 2.11E-103 T 13-10-2018 RPIT_07945 21e2fc6c2828f8aaf980a6278323de2b 350 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 RPIT_07945 21e2fc6c2828f8aaf980a6278323de2b 350 Gene3D G3DSA:3.40.718.10 4 349 3.4E-122 T 13-10-2018 RPIT_07945 21e2fc6c2828f8aaf980a6278323de2b 350 SMART SM01329 5 345 6.2E-144 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RPIT_13105 8759d23fad1a5ca771b072764b19bad0 293 SUPERFAMILY SSF50182 123 180 3.6E-12 T 13-10-2018 IPR010920 LSM domain superfamily RPIT_13105 8759d23fad1a5ca771b072764b19bad0 293 SUPERFAMILY SSF82861 67 121 3.53E-12 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RPIT_13105 8759d23fad1a5ca771b072764b19bad0 293 Pfam PF00924 Mechanosensitive ion channel 80 278 1.4E-36 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RPIT_13105 8759d23fad1a5ca771b072764b19bad0 293 Gene3D G3DSA:3.30.70.100 189 278 7.4E-18 T 13-10-2018 RPIT_13105 8759d23fad1a5ca771b072764b19bad0 293 Gene3D G3DSA:2.30.30.60 138 187 5.3E-18 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily RPIT_13105 8759d23fad1a5ca771b072764b19bad0 293 SUPERFAMILY SSF82689 187 281 1.83E-8 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RPIT_06410 24a44e97bfb8f0fcae7145a116247361 101 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 73 5.5E-12 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain RPIT_06410 24a44e97bfb8f0fcae7145a116247361 101 SUPERFAMILY SSF54909 1 84 1.11E-19 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel RPIT_06410 24a44e97bfb8f0fcae7145a116247361 101 Gene3D G3DSA:3.30.70.100 1 90 1.4E-20 T 13-10-2018 RPIT_00430 59babed04f2aa3b7fa3b64493aaa1328 422 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 414 1.0E-129 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RPIT_00430 59babed04f2aa3b7fa3b64493aaa1328 422 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 4.3E-28 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RPIT_00430 59babed04f2aa3b7fa3b64493aaa1328 422 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 4.3E-28 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RPIT_00430 59babed04f2aa3b7fa3b64493aaa1328 422 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 4.3E-28 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RPIT_00430 59babed04f2aa3b7fa3b64493aaa1328 422 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 4.3E-28 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RPIT_00430 59babed04f2aa3b7fa3b64493aaa1328 422 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 4.3E-28 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RPIT_00430 59babed04f2aa3b7fa3b64493aaa1328 422 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 397 7.9E-22 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_00430 59babed04f2aa3b7fa3b64493aaa1328 422 PIRSF PIRSF001529 1 422 4.3E-137 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RPIT_00430 59babed04f2aa3b7fa3b64493aaa1328 422 Gene3D G3DSA:1.10.287.40 1 102 3.2E-20 T 13-10-2018 RPIT_00430 59babed04f2aa3b7fa3b64493aaa1328 422 Gene3D G3DSA:3.30.930.10 104 422 1.1E-114 T 13-10-2018 RPIT_00430 59babed04f2aa3b7fa3b64493aaa1328 422 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 419 37.37 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RPIT_00430 59babed04f2aa3b7fa3b64493aaa1328 422 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 106 1.4E-23 T 13-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 RPIT_00430 59babed04f2aa3b7fa3b64493aaa1328 422 SUPERFAMILY SSF55681 116 415 4.04E-79 T 13-10-2018 RPIT_00430 59babed04f2aa3b7fa3b64493aaa1328 422 SUPERFAMILY SSF46589 1 111 1.41E-23 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 RPIT_00030 2f5164e47d9932c490de8e2305c7a7c0 616 SUPERFAMILY SSF53323 11 212 2.62E-19 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 RPIT_00030 2f5164e47d9932c490de8e2305c7a7c0 616 Gene3D G3DSA:3.40.50.920 507 611 3.6E-20 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 RPIT_00030 2f5164e47d9932c490de8e2305c7a7c0 616 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 17 206 4.9E-25 T 13-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RPIT_00030 2f5164e47d9932c490de8e2305c7a7c0 616 Gene3D G3DSA:3.40.920.10 7 218 6.2E-16 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 RPIT_00030 2f5164e47d9932c490de8e2305c7a7c0 616 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 9 603 6.7E-195 T 13-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 RPIT_00030 2f5164e47d9932c490de8e2305c7a7c0 616 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 250 423 5.5E-50 T 13-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 RPIT_00030 2f5164e47d9932c490de8e2305c7a7c0 616 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 511 595 4.0E-8 T 13-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II RPIT_00030 2f5164e47d9932c490de8e2305c7a7c0 616 Gene3D G3DSA:3.40.50.970 219 422 7.4E-64 T 13-10-2018 RPIT_00030 2f5164e47d9932c490de8e2305c7a7c0 616 SUPERFAMILY SSF52922 510 612 4.0E-16 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 RPIT_00030 2f5164e47d9932c490de8e2305c7a7c0 616 SUPERFAMILY SSF52518 229 491 9.42E-60 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_11275 83009c8bbedbaacf77f04b965382b8ea 489 SUPERFAMILY SSF53383 16 448 1.25E-140 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_11275 83009c8bbedbaacf77f04b965382b8ea 489 Gene3D G3DSA:3.90.1150.10 338 484 1.2E-44 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_11275 83009c8bbedbaacf77f04b965382b8ea 489 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 28 485 43.403 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 RPIT_11275 83009c8bbedbaacf77f04b965382b8ea 489 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 277 293 - T 13-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 RPIT_11275 83009c8bbedbaacf77f04b965382b8ea 489 Pfam PF00464 Serine hydroxymethyltransferase 166 438 1.4E-93 T 13-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 RPIT_11275 83009c8bbedbaacf77f04b965382b8ea 489 Pfam PF00464 Serine hydroxymethyltransferase 29 133 2.0E-27 T 13-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 RPIT_11275 83009c8bbedbaacf77f04b965382b8ea 489 PIRSF PIRSF000412 10 486 3.1E-159 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 RPIT_08110 76599b5be9197772191267eecc18263f 329 Gene3D G3DSA:3.40.50.1000 9 237 2.8E-69 T 13-10-2018 IPR023214 HAD superfamily RPIT_08110 76599b5be9197772191267eecc18263f 329 SUPERFAMILY SSF56784 7 260 3.5E-50 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_08110 76599b5be9197772191267eecc18263f 329 Gene3D G3DSA:3.40.50.1000 76 187 2.8E-69 T 13-10-2018 IPR023214 HAD superfamily RPIT_08110 76599b5be9197772191267eecc18263f 329 Pfam PF13344 Haloacid dehalogenase-like hydrolase 12 112 9.0E-21 T 13-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA RPIT_08110 76599b5be9197772191267eecc18263f 329 Pfam PF13242 HAD-hyrolase-like 187 254 3.8E-13 T 13-10-2018 RPIT_08110 76599b5be9197772191267eecc18263f 329 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 12 234 1.1E-30 T 13-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA RPIT_08110 76599b5be9197772191267eecc18263f 329 PIRSF PIRSF000915 1 266 1.9E-52 T 13-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA RPIT_02070 1562eeb9ee24c9ffae255890b64a0d67 538 Gene3D G3DSA:3.20.20.80 5 471 1.1E-149 T 13-10-2018 RPIT_02070 1562eeb9ee24c9ffae255890b64a0d67 538 SUPERFAMILY SSF51445 4 472 3.69E-125 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_02070 1562eeb9ee24c9ffae255890b64a0d67 538 Pfam PF00128 Alpha amylase, catalytic domain 28 387 2.7E-80 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_02070 1562eeb9ee24c9ffae255890b64a0d67 538 SMART SM00642 13 416 8.7E-117 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_02070 1562eeb9ee24c9ffae255890b64a0d67 538 Gene3D G3DSA:3.90.400.10 105 182 1.1E-149 T 13-10-2018 RPIT_04500 23905c8a7ae54d32c69a573373cd8c0f 268 SUPERFAMILY SSF46934 1 54 9.08E-16 T 13-10-2018 IPR009060 UBA-like superfamily GO:0005515 RPIT_04500 23905c8a7ae54d32c69a573373cd8c0f 268 Gene3D G3DSA:1.10.8.10 1 54 1.4E-21 T 13-10-2018 RPIT_04500 23905c8a7ae54d32c69a573373cd8c0f 268 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 268 3.9E-72 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RPIT_04500 23905c8a7ae54d32c69a573373cd8c0f 268 Hamap MF_00050 Elongation factor Ts [tsf]. 1 268 61.217 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RPIT_04500 23905c8a7ae54d32c69a573373cd8c0f 268 Gene3D G3DSA:3.30.479.20 158 268 1.6E-36 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 RPIT_04500 23905c8a7ae54d32c69a573373cd8c0f 268 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 13-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RPIT_04500 23905c8a7ae54d32c69a573373cd8c0f 268 Pfam PF00889 Elongation factor TS 66 268 1.0E-57 T 13-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 RPIT_04500 23905c8a7ae54d32c69a573373cd8c0f 268 Gene3D G3DSA:1.10.286.20 188 234 1.6E-36 T 13-10-2018 RPIT_04500 23905c8a7ae54d32c69a573373cd8c0f 268 Gene3D G3DSA:3.30.479.20 56 143 3.9E-15 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 RPIT_04500 23905c8a7ae54d32c69a573373cd8c0f 268 SUPERFAMILY SSF54713 59 268 1.6E-37 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 RPIT_01950 6129ef59be6d2b2a8153e3dd4e2d3519 551 Gene3D G3DSA:3.40.50.12780 16 452 7.0E-117 T 13-10-2018 RPIT_01950 6129ef59be6d2b2a8153e3dd4e2d3519 551 Pfam PF13193 AMP-binding enzyme C-terminal domain 466 539 2.3E-15 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain RPIT_01950 6129ef59be6d2b2a8153e3dd4e2d3519 551 SUPERFAMILY SSF56801 18 551 5.23E-151 T 13-10-2018 RPIT_01950 6129ef59be6d2b2a8153e3dd4e2d3519 551 Pfam PF00501 AMP-binding enzyme 31 457 2.8E-105 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 RPIT_01950 6129ef59be6d2b2a8153e3dd4e2d3519 551 ProSitePatterns PS00455 Putative AMP-binding domain signature. 209 220 - T 13-10-2018 IPR020845 AMP-binding, conserved site RPIT_01950 6129ef59be6d2b2a8153e3dd4e2d3519 551 Gene3D G3DSA:3.30.300.30 453 551 8.6E-29 T 13-10-2018 RPIT_00725 788704778c57b25bdca23c3539e34df1 337 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_00725 788704778c57b25bdca23c3539e34df1 337 SMART SM00930 253 327 1.6E-4 T 13-10-2018 IPR018449 NIL domain RPIT_00725 788704778c57b25bdca23c3539e34df1 337 Pfam PF09383 NIL domain 255 326 4.4E-9 T 13-10-2018 IPR018449 NIL domain RPIT_00725 788704778c57b25bdca23c3539e34df1 337 Gene3D G3DSA:3.40.50.300 1 252 3.6E-80 T 13-10-2018 RPIT_00725 788704778c57b25bdca23c3539e34df1 337 SMART SM00382 30 217 1.1E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_00725 788704778c57b25bdca23c3539e34df1 337 Pfam PF00005 ABC transporter 21 169 2.4E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_00725 788704778c57b25bdca23c3539e34df1 337 SUPERFAMILY SSF55021 253 326 5.61E-6 T 13-10-2018 RPIT_00725 788704778c57b25bdca23c3539e34df1 337 SUPERFAMILY SSF52540 1 231 1.42E-77 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 Pfam PF00288 GHMP kinases N terminal domain 109 174 1.1E-16 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 Gene3D G3DSA:3.30.70.890 196 351 8.5E-125 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 PRINTS PR00473 Galactokinase signature 86 97 3.5E-25 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 PRINTS PR00473 Galactokinase signature 106 124 3.5E-25 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 PRINTS PR00473 Galactokinase signature 24 42 3.5E-25 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 PRINTS PR00473 Galactokinase signature 259 273 3.5E-25 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 Pfam PF10509 Galactokinase galactose-binding signature 7 54 4.3E-21 T 13-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 ProSitePatterns PS00106 Galactokinase signature. 24 35 - T 13-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 115 126 - T 13-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 PIRSF PIRSF000530 1 377 2.3E-114 T 13-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 Gene3D G3DSA:3.30.230.10 19 195 8.5E-125 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 SUPERFAMILY SSF54211 3 197 3.11E-58 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 PRINTS PR00959 Mevalonate kinase family signature 22 46 3.0E-41 T 13-10-2018 RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 PRINTS PR00959 Mevalonate kinase family signature 322 339 3.0E-41 T 13-10-2018 RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 PRINTS PR00959 Mevalonate kinase family signature 156 175 3.0E-41 T 13-10-2018 RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 PRINTS PR00959 Mevalonate kinase family signature 113 135 3.0E-41 T 13-10-2018 RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 TIGRFAM TIGR00131 gal_kin: galactokinase 5 375 2.7E-93 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 SUPERFAMILY SSF55060 203 374 9.44E-50 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 Hamap MF_00246 Galactokinase [galK]. 22 375 39.793 T 13-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 RPIT_06775 7deeccae06d0ae68f541b2e3e8d3ab8f 377 Pfam PF08544 GHMP kinases C terminal 275 355 4.3E-14 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain RPIT_08560 ff01c3e56864f3fdd723b425bcfb63a4 233 SUPERFAMILY SSF51306 19 204 6.41E-43 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily RPIT_08560 ff01c3e56864f3fdd723b425bcfb63a4 233 ProSitePatterns PS00760 Signal peptidases I lysine active site. 96 108 - T 13-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 RPIT_08560 ff01c3e56864f3fdd723b425bcfb63a4 233 ProSitePatterns PS00761 Signal peptidases I signature 3. 152 165 - T 13-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 RPIT_08560 ff01c3e56864f3fdd723b425bcfb63a4 233 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 147 166 2.9E-19 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIT_08560 ff01c3e56864f3fdd723b425bcfb63a4 233 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 94 106 2.9E-19 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIT_08560 ff01c3e56864f3fdd723b425bcfb63a4 233 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 21 37 2.9E-19 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIT_08560 ff01c3e56864f3fdd723b425bcfb63a4 233 Pfam PF00717 Peptidase S24-like 28 118 3.5E-16 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C RPIT_08560 ff01c3e56864f3fdd723b425bcfb63a4 233 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 6 198 7.5E-35 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIT_01680 2dd3df46611624d03427d19f705055dd 339 SUPERFAMILY SSF55347 126 325 9.32E-54 T 13-10-2018 RPIT_01680 2dd3df46611624d03427d19f705055dd 339 PIRSF PIRSF000148 1 339 7.3E-107 T 13-10-2018 RPIT_01680 2dd3df46611624d03427d19f705055dd 339 SUPERFAMILY SSF51735 1 153 2.51E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_01680 2dd3df46611624d03427d19f705055dd 339 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 136 324 5.9E-45 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RPIT_01680 2dd3df46611624d03427d19f705055dd 339 SMART SM00859 2 117 1.4E-39 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RPIT_01680 2dd3df46611624d03427d19f705055dd 339 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 2 338 1.1E-125 T 13-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 RPIT_01680 2dd3df46611624d03427d19f705055dd 339 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 239 253 - T 13-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 RPIT_01680 2dd3df46611624d03427d19f705055dd 339 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 117 3.2E-31 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RPIT_01680 2dd3df46611624d03427d19f705055dd 339 Gene3D G3DSA:3.40.50.720 3 336 2.4E-127 T 13-10-2018 RPIT_01680 2dd3df46611624d03427d19f705055dd 339 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 338 33.799 T 13-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 RPIT_01680 2dd3df46611624d03427d19f705055dd 339 Gene3D G3DSA:3.30.360.10 125 325 2.4E-127 T 13-10-2018 RPIT_12715 8eaef9e1731e08c08c4fe285220faeb1 213 PRINTS PR00096 Glutamine amidotransferase superfamily signature 167 180 1.8E-12 T 13-10-2018 RPIT_12715 8eaef9e1731e08c08c4fe285220faeb1 213 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 1.8E-12 T 13-10-2018 RPIT_12715 8eaef9e1731e08c08c4fe285220faeb1 213 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 1.8E-12 T 13-10-2018 RPIT_12715 8eaef9e1731e08c08c4fe285220faeb1 213 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 3.7E-61 T 13-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RPIT_12715 8eaef9e1731e08c08c4fe285220faeb1 213 Gene3D G3DSA:3.40.50.880 2 191 6.5E-60 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_12715 8eaef9e1731e08c08c4fe285220faeb1 213 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 4.3E-9 T 13-10-2018 RPIT_12715 8eaef9e1731e08c08c4fe285220faeb1 213 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 47 61 4.3E-9 T 13-10-2018 RPIT_12715 8eaef9e1731e08c08c4fe285220faeb1 213 PRINTS PR00097 Anthranilate synthase component II signature 77 88 4.1E-33 T 13-10-2018 RPIT_12715 8eaef9e1731e08c08c4fe285220faeb1 213 PRINTS PR00097 Anthranilate synthase component II signature 4 18 4.1E-33 T 13-10-2018 RPIT_12715 8eaef9e1731e08c08c4fe285220faeb1 213 PRINTS PR00097 Anthranilate synthase component II signature 102 110 4.1E-33 T 13-10-2018 RPIT_12715 8eaef9e1731e08c08c4fe285220faeb1 213 PRINTS PR00097 Anthranilate synthase component II signature 122 134 4.1E-33 T 13-10-2018 RPIT_12715 8eaef9e1731e08c08c4fe285220faeb1 213 PRINTS PR00097 Anthranilate synthase component II signature 50 59 4.1E-33 T 13-10-2018 RPIT_12715 8eaef9e1731e08c08c4fe285220faeb1 213 PRINTS PR00097 Anthranilate synthase component II signature 167 180 4.1E-33 T 13-10-2018 RPIT_12715 8eaef9e1731e08c08c4fe285220faeb1 213 Pfam PF00117 Glutamine amidotransferase class-I 5 189 4.4E-50 T 13-10-2018 IPR017926 Glutamine amidotransferase RPIT_12715 8eaef9e1731e08c08c4fe285220faeb1 213 SUPERFAMILY SSF52317 3 191 3.91E-52 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_05100 fa8484a30d0776d7b8b1fe9846a1ab8e 368 Pfam PF01966 HD domain 111 215 6.2E-14 T 13-10-2018 IPR006674 HD domain RPIT_05100 fa8484a30d0776d7b8b1fe9846a1ab8e 368 Gene3D G3DSA:1.10.3210.10 38 354 3.8E-70 T 13-10-2018 RPIT_05100 fa8484a30d0776d7b8b1fe9846a1ab8e 368 Pfam PF13286 Phosphohydrolase-associated domain 269 349 8.9E-12 T 13-10-2018 IPR026875 Phosphohydrolase-associated domain RPIT_05100 fa8484a30d0776d7b8b1fe9846a1ab8e 368 SMART SM00471 107 226 9.6E-8 T 13-10-2018 IPR003607 HD/PDEase domain RPIT_05100 fa8484a30d0776d7b8b1fe9846a1ab8e 368 SUPERFAMILY SSF109604 65 353 7.14E-59 T 13-10-2018 RPIT_05485 63a1ec0a05f48f034992222966244839 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 8.3E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_05485 63a1ec0a05f48f034992222966244839 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 8.3E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_05485 63a1ec0a05f48f034992222966244839 234 Gene3D G3DSA:1.10.10.10 6 73 2.9E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_05485 63a1ec0a05f48f034992222966244839 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 70 6.0E-16 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_05485 63a1ec0a05f48f034992222966244839 234 Pfam PF07729 FCD domain 95 219 1.7E-16 T 13-10-2018 IPR011711 GntR, C-terminal RPIT_05485 63a1ec0a05f48f034992222966244839 234 SUPERFAMILY SSF48008 93 227 5.23E-20 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIT_05485 63a1ec0a05f48f034992222966244839 234 SMART SM00895 95 220 4.8E-16 T 13-10-2018 IPR011711 GntR, C-terminal RPIT_05485 63a1ec0a05f48f034992222966244839 234 Gene3D G3DSA:1.20.120.530 75 227 2.8E-26 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIT_05485 63a1ec0a05f48f034992222966244839 234 SUPERFAMILY SSF46785 7 74 4.79E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_05485 63a1ec0a05f48f034992222966244839 234 SMART SM00345 9 70 8.8E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_00615 f9a6bfbc8c1fd74d6b6275cf46a61afb 321 Gene3D G3DSA:3.40.50.720 120 258 6.4E-97 T 13-10-2018 RPIT_00615 f9a6bfbc8c1fd74d6b6275cf46a61afb 321 SUPERFAMILY SSF51735 111 283 5.29E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_00615 f9a6bfbc8c1fd74d6b6275cf46a61afb 321 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 320 8.9E-117 T 13-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 RPIT_00615 f9a6bfbc8c1fd74d6b6275cf46a61afb 321 Gene3D G3DSA:3.90.180.10 14 319 6.4E-97 T 13-10-2018 RPIT_00615 f9a6bfbc8c1fd74d6b6275cf46a61afb 321 Pfam PF00107 Zinc-binding dehydrogenase 150 261 1.9E-27 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIT_00615 f9a6bfbc8c1fd74d6b6275cf46a61afb 321 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 87 3.9E-10 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIT_00615 f9a6bfbc8c1fd74d6b6275cf46a61afb 321 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 139 160 - T 13-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 RPIT_00615 f9a6bfbc8c1fd74d6b6275cf46a61afb 321 SUPERFAMILY SSF50129 1 148 2.13E-37 T 13-10-2018 IPR011032 GroES-like superfamily RPIT_00615 f9a6bfbc8c1fd74d6b6275cf46a61afb 321 SMART SM00829 10 319 1.5E-35 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIT_10100 1b688136518c04b22a0d143eced0ca02 479 Gene3D G3DSA:3.40.350.10 42 204 9.5E-17 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RPIT_10100 1b688136518c04b22a0d143eced0ca02 479 Pfam PF00557 Metallopeptidase family M24 214 453 1.7E-48 T 13-10-2018 IPR000994 Peptidase M24 RPIT_10100 1b688136518c04b22a0d143eced0ca02 479 Pfam PF05195 Aminopeptidase P, N-terminal domain 46 163 5.6E-22 T 13-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 RPIT_10100 1b688136518c04b22a0d143eced0ca02 479 SUPERFAMILY SSF53092 46 207 8.89E-24 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RPIT_10100 1b688136518c04b22a0d143eced0ca02 479 SUPERFAMILY SSF55920 208 475 1.44E-60 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like RPIT_10100 1b688136518c04b22a0d143eced0ca02 479 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 387 399 - T 13-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RPIT_10100 1b688136518c04b22a0d143eced0ca02 479 SMART SM01011 38 179 6.9E-36 T 13-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 RPIT_10100 1b688136518c04b22a0d143eced0ca02 479 Gene3D G3DSA:3.90.230.10 206 479 6.2E-75 T 13-10-2018 RPIT_09900 e5fb880a918d525065a727c11332c26b 221 SMART SM00421 158 215 2.1E-23 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_09900 e5fb880a918d525065a727c11332c26b 221 SMART SM00448 12 123 3.9E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_09900 e5fb880a918d525065a727c11332c26b 221 ProSitePatterns PS00622 LuxR-type HTH domain signature. 175 202 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_09900 e5fb880a918d525065a727c11332c26b 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 203 2.4E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_09900 e5fb880a918d525065a727c11332c26b 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 175 2.4E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_09900 e5fb880a918d525065a727c11332c26b 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 191 2.4E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_09900 e5fb880a918d525065a727c11332c26b 221 SUPERFAMILY SSF46894 154 221 3.33E-22 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIT_09900 e5fb880a918d525065a727c11332c26b 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 160 215 1.6E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_09900 e5fb880a918d525065a727c11332c26b 221 Pfam PF00072 Response regulator receiver domain 14 121 6.6E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_09900 e5fb880a918d525065a727c11332c26b 221 Gene3D G3DSA:3.40.50.12740 12 221 2.7E-56 T 13-10-2018 RPIT_09900 e5fb880a918d525065a727c11332c26b 221 SUPERFAMILY SSF52172 11 141 1.18E-27 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_13850 9f2b9119e0e05c38c72f8b8cbb61ff19 361 Pfam PF14897 EpsG family 41 342 1.6E-41 T 13-10-2018 RPIT_06735 bb5fcbd695592370e446ad864f641e6a 563 SMART SM00382 308 493 4.4E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_06735 bb5fcbd695592370e446ad864f641e6a 563 TIGRFAM TIGR00767 rho: transcription termination factor Rho 9 554 4.0E-189 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RPIT_06735 bb5fcbd695592370e446ad864f641e6a 563 SMART SM00959 10 49 3.3E-9 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 RPIT_06735 bb5fcbd695592370e446ad864f641e6a 563 Pfam PF07498 Rho termination factor, N-terminal domain 10 44 4.8E-10 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 RPIT_06735 bb5fcbd695592370e446ad864f641e6a 563 Gene3D G3DSA:2.40.50.140 143 270 1.3E-27 T 13-10-2018 RPIT_06735 bb5fcbd695592370e446ad864f641e6a 563 Pfam PF07497 Rho termination factor, RNA-binding domain 193 266 3.5E-25 T 13-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 RPIT_06735 bb5fcbd695592370e446ad864f641e6a 563 SUPERFAMILY SSF52540 230 509 1.81E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06735 bb5fcbd695592370e446ad864f641e6a 563 SUPERFAMILY SSF50249 193 266 1.71E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_06735 bb5fcbd695592370e446ad864f641e6a 563 SMART SM00357 193 259 6.7E-5 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 RPIT_06735 bb5fcbd695592370e446ad864f641e6a 563 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 298 501 5.5E-18 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 RPIT_06735 bb5fcbd695592370e446ad864f641e6a 563 Hamap MF_01884 Transcription termination factor Rho [rho]. 184 557 190.993 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RPIT_06735 bb5fcbd695592370e446ad864f641e6a 563 Gene3D G3DSA:3.40.50.300 272 555 3.1E-121 T 13-10-2018 RPIT_09685 db1f2074a2520e1594def52156ab1e97 586 SUPERFAMILY SSF51246 329 445 5.23E-35 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 RPIT_09685 db1f2074a2520e1594def52156ab1e97 586 SMART SM00878 333 443 4.1E-53 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RPIT_09685 db1f2074a2520e1594def52156ab1e97 586 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 540 557 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RPIT_09685 db1f2074a2520e1594def52156ab1e97 586 Gene3D G3DSA:3.30.470.130 1 447 7.7E-172 T 13-10-2018 RPIT_09685 db1f2074a2520e1594def52156ab1e97 586 Pfam PF02785 Biotin carboxylase C-terminal domain 333 443 2.0E-35 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RPIT_09685 db1f2074a2520e1594def52156ab1e97 586 Gene3D G3DSA:2.40.50.100 512 585 7.5E-22 T 13-10-2018 RPIT_09685 db1f2074a2520e1594def52156ab1e97 586 SUPERFAMILY SSF51230 511 583 3.66E-20 T 13-10-2018 IPR011053 Single hybrid motif RPIT_09685 db1f2074a2520e1594def52156ab1e97 586 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 320 1.4E-75 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIT_09685 db1f2074a2520e1594def52156ab1e97 586 Pfam PF00364 Biotin-requiring enzyme 518 583 5.1E-18 T 13-10-2018 IPR000089 Biotin/lipoyl attachment RPIT_09685 db1f2074a2520e1594def52156ab1e97 586 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 6.1E-42 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RPIT_09685 db1f2074a2520e1594def52156ab1e97 586 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIT_09685 db1f2074a2520e1594def52156ab1e97 586 SUPERFAMILY SSF56059 114 322 1.52E-58 T 13-10-2018 RPIT_09685 db1f2074a2520e1594def52156ab1e97 586 SUPERFAMILY SSF52440 1 112 2.52E-45 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily RPIT_03765 3b661c6c5b65a84bd3ed9ffb699bdc73 602 Pfam PF01541 GIY-YIG catalytic domain 231 305 3.5E-6 T 13-10-2018 IPR000305 GIY-YIG endonuclease RPIT_03765 3b661c6c5b65a84bd3ed9ffb699bdc73 602 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 18 180 1.6E-27 T 13-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_03765 3b661c6c5b65a84bd3ed9ffb699bdc73 602 SMART SM00479 21 188 5.6E-42 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIT_03765 3b661c6c5b65a84bd3ed9ffb699bdc73 602 SUPERFAMILY SSF53098 16 201 1.09E-48 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily RPIT_03765 3b661c6c5b65a84bd3ed9ffb699bdc73 602 SUPERFAMILY SSF82771 240 308 1.83E-12 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 RPIT_03765 3b661c6c5b65a84bd3ed9ffb699bdc73 602 Gene3D G3DSA:3.40.1440.10 209 314 4.8E-21 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 RPIT_03765 3b661c6c5b65a84bd3ed9ffb699bdc73 602 Gene3D G3DSA:3.30.420.10 16 188 2.1E-47 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 RPIT_03765 3b661c6c5b65a84bd3ed9ffb699bdc73 602 Pfam PF00929 Exonuclease 23 179 3.4E-29 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIT_03765 3b661c6c5b65a84bd3ed9ffb699bdc73 602 SMART SM00465 221 310 5.3E-12 T 13-10-2018 IPR000305 GIY-YIG endonuclease RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 Hamap MF_01588 DNA ligase [ligA]. 14 679 49.673 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 SUPERFAMILY SSF56091 15 321 4.48E-107 T 13-10-2018 RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 334 349 - T 13-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 SUPERFAMILY SSF50249 321 403 1.4E-23 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 410 437 1.5E-7 T 13-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 SMART SM00292 605 682 1.1E-10 T 13-10-2018 IPR001357 BRCT domain RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 SUPERFAMILY SSF47781 406 596 2.95E-48 T 13-10-2018 IPR010994 RuvA domain 2-like RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 SUPERFAMILY SSF52113 607 681 1.16E-15 T 13-10-2018 IPR036420 BRCT domain superfamily RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 SMART SM00532 15 452 9.3E-238 T 13-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 23 674 4.4E-222 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 325 401 2.4E-28 T 13-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 Gene3D G3DSA:2.20.70.80 394 433 2.2E-5 T 13-10-2018 RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 Gene3D G3DSA:1.10.150.20 436 517 3.1E-7 T 13-10-2018 RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 Gene3D G3DSA:1.10.287.610 4 79 4.4E-22 T 13-10-2018 RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 Gene3D G3DSA:1.10.150.20 518 598 4.1E-28 T 13-10-2018 RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 Gene3D G3DSA:2.40.50.140 321 392 3.7E-25 T 13-10-2018 RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 Pfam PF12826 Helix-hairpin-helix motif 523 586 1.6E-22 T 13-10-2018 RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 608 678 3.5E-9 T 13-10-2018 IPR001357 BRCT domain RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 PIRSF PIRSF001604 8 683 7.2E-224 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 16 321 1.6E-110 T 13-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 Gene3D G3DSA:3.30.470.90 80 320 6.4E-94 T 13-10-2018 RPIT_08925 65485d1997b234984d81cb999e6e5f3c 694 Gene3D G3DSA:3.40.50.10190 603 686 2.2E-23 T 13-10-2018 IPR036420 BRCT domain superfamily RPIT_01555 54c35d9d21610125ca637157499c9a65 321 SUPERFAMILY SSF52402 22 228 4.71E-40 T 13-10-2018 RPIT_01555 54c35d9d21610125ca637157499c9a65 321 SUPERFAMILY SSF82829 209 302 6.28E-10 T 13-10-2018 RPIT_01555 54c35d9d21610125ca637157499c9a65 321 Pfam PF01171 PP-loop family 27 196 2.6E-31 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 RPIT_01555 54c35d9d21610125ca637157499c9a65 321 Pfam PF09179 TilS substrate binding domain 241 304 4.1E-6 T 13-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RPIT_01555 54c35d9d21610125ca637157499c9a65 321 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 26 196 1.5E-35 T 13-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RPIT_01555 54c35d9d21610125ca637157499c9a65 321 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 13 299 17.678 T 13-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RPIT_01555 54c35d9d21610125ca637157499c9a65 321 Gene3D G3DSA:3.40.50.620 20 230 4.0E-55 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_13605 35c918fc407a0bc6c36a60196f19fb6f 446 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 20 443 3.1E-155 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RPIT_13605 35c918fc407a0bc6c36a60196f19fb6f 446 SUPERFAMILY SSF48295 340 445 1.2E-33 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 RPIT_13605 35c918fc407a0bc6c36a60196f19fb6f 446 Gene3D G3DSA:1.10.1750.10 349 446 1.2E-34 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 RPIT_13605 35c918fc407a0bc6c36a60196f19fb6f 446 SMART SM00760 353 422 2.8E-33 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RPIT_13605 35c918fc407a0bc6c36a60196f19fb6f 446 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 5 444 30.739 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RPIT_13605 35c918fc407a0bc6c36a60196f19fb6f 446 Pfam PF00308 Bacterial dnaA protein 110 327 6.9E-95 T 13-10-2018 IPR013317 Chromosomal replication initiator protein DnaA RPIT_13605 35c918fc407a0bc6c36a60196f19fb6f 446 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 355 422 1.6E-29 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RPIT_13605 35c918fc407a0bc6c36a60196f19fb6f 446 SUPERFAMILY SSF52540 109 322 8.12E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_13605 35c918fc407a0bc6c36a60196f19fb6f 446 ProSitePatterns PS01008 DnaA protein signature. 403 422 - T 13-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RPIT_13605 35c918fc407a0bc6c36a60196f19fb6f 446 Gene3D G3DSA:3.40.50.300 96 274 1.7E-53 T 13-10-2018 RPIT_13605 35c918fc407a0bc6c36a60196f19fb6f 446 Gene3D G3DSA:1.10.8.60 276 346 1.5E-22 T 13-10-2018 RPIT_13605 35c918fc407a0bc6c36a60196f19fb6f 446 SMART SM00382 142 270 2.9E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_13605 35c918fc407a0bc6c36a60196f19fb6f 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 241 268 3.6E-50 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like RPIT_13605 35c918fc407a0bc6c36a60196f19fb6f 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 175 189 3.6E-50 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like RPIT_13605 35c918fc407a0bc6c36a60196f19fb6f 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 207 221 3.6E-50 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like RPIT_13605 35c918fc407a0bc6c36a60196f19fb6f 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 143 163 3.6E-50 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like RPIT_13605 35c918fc407a0bc6c36a60196f19fb6f 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 403 422 3.6E-50 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like RPIT_02160 78f9ea18512a47957e7e43b794b63c34 137 Pfam PF02391 MoaE protein 6 116 3.2E-29 T 13-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 RPIT_02160 78f9ea18512a47957e7e43b794b63c34 137 Gene3D G3DSA:3.90.1170.40 1 135 6.6E-41 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 RPIT_02160 78f9ea18512a47957e7e43b794b63c34 137 SUPERFAMILY SSF54690 4 134 5.1E-35 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 RPIT_14320 db4b831831f51cbdb6f25c37a8782186 786 SUPERFAMILY SSF51445 183 661 2.37E-83 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_14320 db4b831831f51cbdb6f25c37a8782186 786 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 18 125 3.1E-6 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RPIT_14320 db4b831831f51cbdb6f25c37a8782186 786 Gene3D G3DSA:2.60.40.10 13 175 6.7E-40 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_14320 db4b831831f51cbdb6f25c37a8782186 786 SMART SM00642 212 612 4.9E-8 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_14320 db4b831831f51cbdb6f25c37a8782186 786 Pfam PF00128 Alpha amylase, catalytic domain 232 588 2.4E-16 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_14320 db4b831831f51cbdb6f25c37a8782186 786 Gene3D G3DSA:2.60.40.1180 671 771 6.9E-12 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta RPIT_14320 db4b831831f51cbdb6f25c37a8782186 786 SUPERFAMILY SSF51011 681 769 3.78E-12 T 13-10-2018 RPIT_14320 db4b831831f51cbdb6f25c37a8782186 786 Gene3D G3DSA:3.20.20.80 177 623 1.0E-127 T 13-10-2018 RPIT_14320 db4b831831f51cbdb6f25c37a8782186 786 SUPERFAMILY SSF81296 16 141 4.76E-29 T 13-10-2018 IPR014756 Immunoglobulin E-set RPIT_11790 8ce1d020afed9d6ad4e0d3ea26105540 211 SUPERFAMILY SSF50475 23 211 7.11E-59 T 13-10-2018 RPIT_11790 8ce1d020afed9d6ad4e0d3ea26105540 211 PIRSF PIRSF000190 2 211 6.9E-70 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RPIT_11790 8ce1d020afed9d6ad4e0d3ea26105540 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 3.6E-69 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RPIT_11790 8ce1d020afed9d6ad4e0d3ea26105540 211 Gene3D G3DSA:2.30.110.10 2 211 2.3E-73 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 RPIT_11790 8ce1d020afed9d6ad4e0d3ea26105540 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 8.2E-17 T 13-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RPIT_11790 8ce1d020afed9d6ad4e0d3ea26105540 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 13-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RPIT_11790 8ce1d020afed9d6ad4e0d3ea26105540 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 117 8.5E-18 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RPIT_11790 8ce1d020afed9d6ad4e0d3ea26105540 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 34.647 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RPIT_02880 927c1ffef43ffd4d1cbccb20d273d2d8 251 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 16 225 1.5E-38 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_02880 927c1ffef43ffd4d1cbccb20d273d2d8 251 SMART SM00855 15 186 1.3E-13 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_02880 927c1ffef43ffd4d1cbccb20d273d2d8 251 Gene3D G3DSA:3.40.50.1240 13 248 3.9E-48 T 13-10-2018 IPR029033 Histidine phosphatase superfamily RPIT_02880 927c1ffef43ffd4d1cbccb20d273d2d8 251 PIRSF PIRSF000709 10 191 2.9E-20 T 13-10-2018 RPIT_02880 927c1ffef43ffd4d1cbccb20d273d2d8 251 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 18 27 - T 13-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 RPIT_02880 927c1ffef43ffd4d1cbccb20d273d2d8 251 SUPERFAMILY SSF53254 15 232 1.19E-43 T 13-10-2018 IPR029033 Histidine phosphatase superfamily RPIT_06770 bc83642e05cb1ce795f7c76319a0712d 1240 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 10 43 1.4E-11 T 13-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RPIT_06770 bc83642e05cb1ce795f7c76319a0712d 1240 Gene3D G3DSA:3.40.50.970 475 836 1.1E-142 T 13-10-2018 RPIT_06770 bc83642e05cb1ce795f7c76319a0712d 1240 Gene3D G3DSA:3.40.50.11610 1030 1237 3.0E-144 T 13-10-2018 RPIT_06770 bc83642e05cb1ce795f7c76319a0712d 1240 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 1092 1239 2.3E-36 T 13-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RPIT_06770 bc83642e05cb1ce795f7c76319a0712d 1240 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 134 359 3.6E-48 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 RPIT_06770 bc83642e05cb1ce795f7c76319a0712d 1240 SMART SM00861 894 1087 1.3E-45 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RPIT_06770 bc83642e05cb1ce795f7c76319a0712d 1240 PIRSF PIRSF000157 2 1240 0.0 T 13-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RPIT_06770 bc83642e05cb1ce795f7c76319a0712d 1240 Pfam PF00676 Dehydrogenase E1 component 521 831 1.4E-55 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 RPIT_06770 bc83642e05cb1ce795f7c76319a0712d 1240 SUPERFAMILY SSF52518 462 841 9.57E-81 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_06770 bc83642e05cb1ce795f7c76319a0712d 1240 Gene3D G3DSA:3.30.559.10 108 366 7.0E-50 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 RPIT_06770 bc83642e05cb1ce795f7c76319a0712d 1240 SUPERFAMILY SSF52518 889 1093 4.02E-43 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_06770 bc83642e05cb1ce795f7c76319a0712d 1240 SUPERFAMILY SSF52777 117 359 7.12E-51 T 13-10-2018 RPIT_06770 bc83642e05cb1ce795f7c76319a0712d 1240 Gene3D G3DSA:3.40.50.12470 853 1109 3.0E-144 T 13-10-2018 RPIT_06770 bc83642e05cb1ce795f7c76319a0712d 1240 Gene3D G3DSA:1.10.287.1150 390 474 5.4E-24 T 13-10-2018 RPIT_06770 bc83642e05cb1ce795f7c76319a0712d 1240 Pfam PF02779 Transketolase, pyrimidine binding domain 893 1087 1.5E-53 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RPIT_06770 bc83642e05cb1ce795f7c76319a0712d 1240 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 393 1238 7.5E-293 T 13-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RPIT_11615 6f4930f7f0d8de833664717ca5b5ccfb 218 Pfam PF03466 LysR substrate binding domain 36 110 1.2E-12 T 13-10-2018 IPR005119 LysR, substrate-binding RPIT_11615 6f4930f7f0d8de833664717ca5b5ccfb 218 Gene3D G3DSA:3.40.190.290 12 117 1.8E-13 T 13-10-2018 RPIT_11615 6f4930f7f0d8de833664717ca5b5ccfb 218 SUPERFAMILY SSF53850 11 176 1.55E-16 T 13-10-2018 RPIT_07160 fb0fef2984d4e6690c625d6c740ceb25 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 156 184 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIT_07160 fb0fef2984d4e6690c625d6c740ceb25 259 Gene3D G3DSA:3.40.50.720 3 258 3.2E-52 T 13-10-2018 RPIT_07160 fb0fef2984d4e6690c625d6c740ceb25 259 SUPERFAMILY SSF51735 9 257 1.22E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_07160 fb0fef2984d4e6690c625d6c740ceb25 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 256 1.4E-33 T 13-10-2018 RPIT_07160 fb0fef2984d4e6690c625d6c740ceb25 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 8.0E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_07160 fb0fef2984d4e6690c625d6c740ceb25 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 163 8.0E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_07160 fb0fef2984d4e6690c625d6c740ceb25 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 8.0E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_07160 fb0fef2984d4e6690c625d6c740ceb25 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 8.0E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_07160 fb0fef2984d4e6690c625d6c740ceb25 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 8.0E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_08810 c9009f97aedf61e2af68a0812a6bca0a 198 PRINTS PR00127 Clp protease catalytic subunit P signature 85 102 1.4E-46 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIT_08810 c9009f97aedf61e2af68a0812a6bca0a 198 PRINTS PR00127 Clp protease catalytic subunit P signature 163 182 1.4E-46 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIT_08810 c9009f97aedf61e2af68a0812a6bca0a 198 PRINTS PR00127 Clp protease catalytic subunit P signature 106 125 1.4E-46 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIT_08810 c9009f97aedf61e2af68a0812a6bca0a 198 PRINTS PR00127 Clp protease catalytic subunit P signature 14 29 1.4E-46 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIT_08810 c9009f97aedf61e2af68a0812a6bca0a 198 PRINTS PR00127 Clp protease catalytic subunit P signature 54 74 1.4E-46 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIT_08810 c9009f97aedf61e2af68a0812a6bca0a 198 Gene3D G3DSA:3.90.226.10 9 192 1.9E-74 T 13-10-2018 RPIT_08810 c9009f97aedf61e2af68a0812a6bca0a 198 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 2 188 39.131 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIT_08810 c9009f97aedf61e2af68a0812a6bca0a 198 Pfam PF00574 Clp protease 13 187 8.9E-78 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RPIT_08810 c9009f97aedf61e2af68a0812a6bca0a 198 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 107 120 - T 13-10-2018 IPR033135 ClpP, histidine active site RPIT_08810 c9009f97aedf61e2af68a0812a6bca0a 198 SUPERFAMILY SSF52096 14 188 1.71E-66 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily RPIT_09425 5b27c658edd9ed412bdd21c5a7d23c47 165 Pfam PF08281 Sigma-70, region 4 101 152 6.3E-13 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIT_09425 5b27c658edd9ed412bdd21c5a7d23c47 165 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 7 156 9.6E-49 T 13-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 RPIT_09425 5b27c658edd9ed412bdd21c5a7d23c47 165 SUPERFAMILY SSF88946 8 81 1.33E-11 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_09425 5b27c658edd9ed412bdd21c5a7d23c47 165 Pfam PF04542 Sigma-70 region 2 12 78 2.5E-7 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_09425 5b27c658edd9ed412bdd21c5a7d23c47 165 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 153 3.7E-17 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 RPIT_09425 5b27c658edd9ed412bdd21c5a7d23c47 165 SUPERFAMILY SSF88659 99 154 2.43E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like RPIT_09425 5b27c658edd9ed412bdd21c5a7d23c47 165 Gene3D G3DSA:1.10.10.10 78 157 1.4E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_09425 5b27c658edd9ed412bdd21c5a7d23c47 165 Gene3D G3DSA:1.10.1740.10 2 77 2.9E-10 T 13-10-2018 RPIT_10205 6d680ea720fbfd6c36dbc0dfb6277515 523 PIRSF PIRSF005522 1 479 9.9E-194 T 13-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 RPIT_10205 6d680ea720fbfd6c36dbc0dfb6277515 523 Gene3D G3DSA:3.40.50.11290 213 311 5.1E-40 T 13-10-2018 RPIT_10205 6d680ea720fbfd6c36dbc0dfb6277515 523 Gene3D G3DSA:3.30.1490.270 348 408 7.8E-23 T 13-10-2018 RPIT_10205 6d680ea720fbfd6c36dbc0dfb6277515 523 Pfam PF14403 Circularly permuted ATP-grasp type 2 76 452 3.3E-154 T 13-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 RPIT_10205 6d680ea720fbfd6c36dbc0dfb6277515 523 SUPERFAMILY SSF56059 27 466 1.88E-49 T 13-10-2018 RPIT_02580 3265fe3e52b7b40435a869a8f4ad9eae 315 Pfam PF13378 Enolase C-terminal domain-like 82 279 1.4E-34 T 13-10-2018 IPR029065 Enolase C-terminal domain-like RPIT_02580 3265fe3e52b7b40435a869a8f4ad9eae 315 Gene3D G3DSA:3.30.390.10 7 302 9.3E-112 T 13-10-2018 IPR029017 Enolase-like, N-terminal RPIT_02580 3265fe3e52b7b40435a869a8f4ad9eae 315 Gene3D G3DSA:3.20.20.120 59 283 9.3E-112 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily RPIT_02580 3265fe3e52b7b40435a869a8f4ad9eae 315 SMART SM00922 79 175 5.2E-19 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RPIT_02580 3265fe3e52b7b40435a869a8f4ad9eae 315 SUPERFAMILY SSF51604 64 287 3.01E-50 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily RPIT_02580 3265fe3e52b7b40435a869a8f4ad9eae 315 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 1 300 21.936 T 13-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 RPIT_13200 b51df02d23145f8b94d4028f9c80646f 548 Pfam PF00348 Polyprenyl synthetase 243 492 5.6E-39 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 RPIT_13200 b51df02d23145f8b94d4028f9c80646f 548 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 15 175 1.4E-43 T 13-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 RPIT_13200 b51df02d23145f8b94d4028f9c80646f 548 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 289 303 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site RPIT_13200 b51df02d23145f8b94d4028f9c80646f 548 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 13 188 35.375 T 13-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 RPIT_13200 b51df02d23145f8b94d4028f9c80646f 548 Gene3D G3DSA:3.90.79.10 11 179 9.6E-52 T 13-10-2018 RPIT_13200 b51df02d23145f8b94d4028f9c80646f 548 Gene3D G3DSA:1.10.600.10 188 547 8.1E-80 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily RPIT_13200 b51df02d23145f8b94d4028f9c80646f 548 SUPERFAMILY SSF55811 14 177 5.69E-48 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 RPIT_13200 b51df02d23145f8b94d4028f9c80646f 548 SUPERFAMILY SSF48576 234 545 6.72E-55 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily RPIT_13200 b51df02d23145f8b94d4028f9c80646f 548 Pfam PF00293 NUDIX domain 40 161 3.4E-23 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 RPIT_08945 3db8537a03a76f29d50e71d02ae10825 309 SUPERFAMILY SSF53671 2 305 1.01E-87 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 RPIT_08945 3db8537a03a76f29d50e71d02ae10825 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 7.9E-14 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIT_08945 3db8537a03a76f29d50e71d02ae10825 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 48 67 7.9E-14 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIT_08945 3db8537a03a76f29d50e71d02ae10825 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 7.9E-14 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIT_08945 3db8537a03a76f29d50e71d02ae10825 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 7.9E-14 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIT_08945 3db8537a03a76f29d50e71d02ae10825 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 48 55 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIT_08945 3db8537a03a76f29d50e71d02ae10825 309 Gene3D G3DSA:3.40.50.1370 5 299 2.0E-86 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 RPIT_08945 3db8537a03a76f29d50e71d02ae10825 309 Gene3D G3DSA:3.40.50.1370 132 283 2.0E-86 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 RPIT_08945 3db8537a03a76f29d50e71d02ae10825 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 143 6.3E-41 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RPIT_08945 3db8537a03a76f29d50e71d02ae10825 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 76 85 5.2E-27 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RPIT_08945 3db8537a03a76f29d50e71d02ae10825 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 220 229 5.2E-27 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RPIT_08945 3db8537a03a76f29d50e71d02ae10825 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 131 148 5.2E-27 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RPIT_08945 3db8537a03a76f29d50e71d02ae10825 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 285 299 5.2E-27 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RPIT_08945 3db8537a03a76f29d50e71d02ae10825 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 261 266 5.2E-27 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RPIT_08945 3db8537a03a76f29d50e71d02ae10825 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 38 60 5.2E-27 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RPIT_08945 3db8537a03a76f29d50e71d02ae10825 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 306 38.596 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RPIT_08945 3db8537a03a76f29d50e71d02ae10825 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 304 4.8E-85 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RPIT_08945 3db8537a03a76f29d50e71d02ae10825 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 302 3.0E-15 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RPIT_03105 5771f56cf603110f604f08dad41f72bf 448 SUPERFAMILY SSF52821 217 348 2.88E-17 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_03105 5771f56cf603110f604f08dad41f72bf 448 SMART SM00450 249 347 5.2 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_03105 5771f56cf603110f604f08dad41f72bf 448 SMART SM00450 352 445 3.0E-17 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_03105 5771f56cf603110f604f08dad41f72bf 448 Gene3D G3DSA:3.40.250.10 351 448 1.8E-18 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_03105 5771f56cf603110f604f08dad41f72bf 448 Gene3D G3DSA:3.40.250.10 244 336 2.1E-14 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_03105 5771f56cf603110f604f08dad41f72bf 448 Pfam PF00753 Metallo-beta-lactamase superfamily 16 144 3.3E-7 T 13-10-2018 IPR001279 Metallo-beta-lactamase RPIT_03105 5771f56cf603110f604f08dad41f72bf 448 Pfam PF00581 Rhodanese-like domain 356 438 9.8E-10 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_03105 5771f56cf603110f604f08dad41f72bf 448 SUPERFAMILY SSF52821 351 438 1.31E-20 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_03105 5771f56cf603110f604f08dad41f72bf 448 SMART SM00849 13 178 2.0E-18 T 13-10-2018 IPR001279 Metallo-beta-lactamase RPIT_03105 5771f56cf603110f604f08dad41f72bf 448 SUPERFAMILY SSF56281 13 238 4.34E-40 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RPIT_03105 5771f56cf603110f604f08dad41f72bf 448 Gene3D G3DSA:3.60.15.10 2 240 5.9E-56 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RPIT_04385 2a7bd6aab2f86dcdc53e45648017a2b6 209 SUPERFAMILY SSF52172 2 128 1.1E-30 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_04385 2a7bd6aab2f86dcdc53e45648017a2b6 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 8.7E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_04385 2a7bd6aab2f86dcdc53e45648017a2b6 209 SMART SM00421 144 201 1.9E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_04385 2a7bd6aab2f86dcdc53e45648017a2b6 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 1.7E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_04385 2a7bd6aab2f86dcdc53e45648017a2b6 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 1.7E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_04385 2a7bd6aab2f86dcdc53e45648017a2b6 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 1.7E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_04385 2a7bd6aab2f86dcdc53e45648017a2b6 209 SMART SM00448 2 115 5.5E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_04385 2a7bd6aab2f86dcdc53e45648017a2b6 209 Gene3D G3DSA:3.40.50.12740 2 207 3.2E-54 T 13-10-2018 RPIT_04385 2a7bd6aab2f86dcdc53e45648017a2b6 209 Pfam PF00072 Response regulator receiver domain 4 108 1.7E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_04385 2a7bd6aab2f86dcdc53e45648017a2b6 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_04385 2a7bd6aab2f86dcdc53e45648017a2b6 209 SUPERFAMILY SSF46894 132 207 1.19E-15 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 PIRSF PIRSF000350 1 461 1.9E-76 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 SUPERFAMILY SSF55424 343 458 8.42E-29 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 50 9.8E-50 T 13-10-2018 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 9.8E-50 T 13-10-2018 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 9.8E-50 T 13-10-2018 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 9.8E-50 T 13-10-2018 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 9.8E-50 T 13-10-2018 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 448 9.8E-50 T 13-10-2018 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 9.8E-50 T 13-10-2018 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 9.8E-50 T 13-10-2018 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 9.8E-50 T 13-10-2018 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 453 1.8E-24 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 325 5.4E-60 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 SUPERFAMILY SSF51905 3 331 4.0E-49 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.3E-32 T 13-10-2018 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 2.3E-32 T 13-10-2018 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 2.3E-32 T 13-10-2018 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 2.3E-32 T 13-10-2018 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 2.3E-32 T 13-10-2018 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 Gene3D G3DSA:3.50.50.60 4 328 2.3E-98 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 Gene3D G3DSA:3.30.390.30 338 458 2.2E-34 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 RPIT_09700 7ed98eeb961ac19c1447228ecfbbf09e 467 Gene3D G3DSA:3.50.50.60 152 270 2.3E-98 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_01290 68146e9c87d606136eb5ac3079afd4d5 425 SUPERFAMILY SSF52418 71 318 1.44E-79 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 RPIT_01290 68146e9c87d606136eb5ac3079afd4d5 425 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 112 127 - T 13-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RPIT_01290 68146e9c87d606136eb5ac3079afd4d5 425 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 336 407 3.9E-22 T 13-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RPIT_01290 68146e9c87d606136eb5ac3079afd4d5 425 Gene3D G3DSA:3.40.1030.10 80 321 1.6E-129 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 RPIT_01290 68146e9c87d606136eb5ac3079afd4d5 425 SUPERFAMILY SSF54680 322 424 3.79E-27 T 13-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RPIT_01290 68146e9c87d606136eb5ac3079afd4d5 425 Gene3D G3DSA:1.20.970.10 3 69 8.7E-23 T 13-10-2018 RPIT_01290 68146e9c87d606136eb5ac3079afd4d5 425 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 68 1.1E-18 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 RPIT_01290 68146e9c87d606136eb5ac3079afd4d5 425 Gene3D G3DSA:3.90.1170.30 322 412 1.6E-129 T 13-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RPIT_01290 68146e9c87d606136eb5ac3079afd4d5 425 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 6 404 8.2E-165 T 13-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 RPIT_01290 68146e9c87d606136eb5ac3079afd4d5 425 SMART SM00941 336 410 3.9E-31 T 13-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RPIT_01290 68146e9c87d606136eb5ac3079afd4d5 425 SUPERFAMILY SSF47648 3 71 1.31E-21 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 RPIT_01290 68146e9c87d606136eb5ac3079afd4d5 425 Pfam PF00591 Glycosyl transferase family, a/b domain 80 288 2.4E-32 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RPIT_01290 68146e9c87d606136eb5ac3079afd4d5 425 PIRSF PIRSF000478 2 424 9.4E-151 T 13-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RPIT_08815 bc08cf68f7f479c9f733da379ce88e91 382 Pfam PF01594 AI-2E family transporter 36 347 5.9E-36 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like RPIT_06185 0f2c7658f19a0a62e17ee683d447e5b5 375 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 180 194 5.1E-30 T 13-10-2018 RPIT_06185 0f2c7658f19a0a62e17ee683d447e5b5 375 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 292 303 5.1E-30 T 13-10-2018 RPIT_06185 0f2c7658f19a0a62e17ee683d447e5b5 375 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 267 284 5.1E-30 T 13-10-2018 RPIT_06185 0f2c7658f19a0a62e17ee683d447e5b5 375 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 219 233 5.1E-30 T 13-10-2018 RPIT_06185 0f2c7658f19a0a62e17ee683d447e5b5 375 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 250 266 5.1E-30 T 13-10-2018 RPIT_06185 0f2c7658f19a0a62e17ee683d447e5b5 375 SMART SM01097 4 134 8.8E-87 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06185 0f2c7658f19a0a62e17ee683d447e5b5 375 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 4 373 44.513 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06185 0f2c7658f19a0a62e17ee683d447e5b5 375 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 6 369 4.4E-134 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06185 0f2c7658f19a0a62e17ee683d447e5b5 375 Pfam PF00117 Glutamine amidotransferase class-I 184 367 1.6E-35 T 13-10-2018 IPR017926 Glutamine amidotransferase RPIT_06185 0f2c7658f19a0a62e17ee683d447e5b5 375 SUPERFAMILY SSF52317 173 370 1.92E-45 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_06185 0f2c7658f19a0a62e17ee683d447e5b5 375 Gene3D G3DSA:3.40.50.880 152 371 1.3E-52 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_06185 0f2c7658f19a0a62e17ee683d447e5b5 375 PRINTS PR00096 Glutamine amidotransferase superfamily signature 222 231 5.4E-10 T 13-10-2018 RPIT_06185 0f2c7658f19a0a62e17ee683d447e5b5 375 PRINTS PR00096 Glutamine amidotransferase superfamily signature 250 261 5.4E-10 T 13-10-2018 RPIT_06185 0f2c7658f19a0a62e17ee683d447e5b5 375 PRINTS PR00096 Glutamine amidotransferase superfamily signature 344 357 5.4E-10 T 13-10-2018 RPIT_06185 0f2c7658f19a0a62e17ee683d447e5b5 375 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 6 132 3.1E-52 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06185 0f2c7658f19a0a62e17ee683d447e5b5 375 Gene3D G3DSA:3.50.30.20 4 150 9.0E-58 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06185 0f2c7658f19a0a62e17ee683d447e5b5 375 SUPERFAMILY SSF52021 5 148 7.85E-56 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_07040 89caef98a963d9e1da241d1b3415ab39 675 SMART SM00487 29 320 0.0014 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIT_07040 89caef98a963d9e1da241d1b3415ab39 675 Gene3D G3DSA:3.40.50.300 31 294 3.8E-39 T 13-10-2018 RPIT_07040 89caef98a963d9e1da241d1b3415ab39 675 Gene3D G3DSA:3.40.50.300 483 667 1.7E-31 T 13-10-2018 RPIT_07040 89caef98a963d9e1da241d1b3415ab39 675 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 257 266 - T 13-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site RPIT_07040 89caef98a963d9e1da241d1b3415ab39 675 Pfam PF13307 Helicase C-terminal domain 495 653 3.9E-29 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RPIT_07040 89caef98a963d9e1da241d1b3415ab39 675 SUPERFAMILY SSF52540 48 633 3.05E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_07040 89caef98a963d9e1da241d1b3415ab39 675 SMART SM00491 512 642 1.0E-38 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 ProSitePatterns PS01312 SecA family signature. 477 492 - T 13-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 SUPERFAMILY SSF52540 11 392 3.17E-79 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 Pfam PF07517 SecA DEAD-like domain 11 379 1.1E-127 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 SUPERFAMILY SSF52540 393 609 8.28E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 SMART SM00957 1 379 4.2E-268 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 23 804 0.0 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 Gene3D G3DSA:3.10.450.50 882 924 4.2E-8 T 13-10-2018 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 Gene3D G3DSA:3.40.50.300 394 611 1.2E-89 T 13-10-2018 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 Pfam PF07516 SecA Wing and Scaffold domain 609 817 1.4E-63 T 13-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 SMART SM00958 223 335 6.2E-60 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 Pfam PF02810 SEC-C motif 906 924 2.6E-8 T 13-10-2018 IPR004027 SEC-C motif RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 Hamap MF_01382 Protein translocase subunit SecA [secA]. 2 820 19.327 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 Gene3D G3DSA:3.40.50.300 17 392 9.1E-176 T 13-10-2018 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 Gene3D G3DSA:1.10.3060.10 614 821 4.0E-73 T 13-10-2018 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 PRINTS PR00906 SecA protein signature 316 338 1.8E-70 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 PRINTS PR00906 SecA protein signature 96 110 1.8E-70 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 PRINTS PR00906 SecA protein signature 390 403 1.8E-70 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 PRINTS PR00906 SecA protein signature 353 370 1.8E-70 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 PRINTS PR00906 SecA protein signature 112 122 1.8E-70 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 PRINTS PR00906 SecA protein signature 58 82 1.8E-70 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 PRINTS PR00906 SecA protein signature 165 185 1.8E-70 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 Gene3D G3DSA:3.90.1440.10 224 345 9.1E-176 T 13-10-2018 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 Pfam PF01043 SecA preprotein cross-linking domain 227 335 6.5E-33 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 SUPERFAMILY SSF81767 222 345 1.1E-41 T 13-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 RPIT_05355 9b5e66ea3b8a893e0749183b5eb2ab3d 929 SUPERFAMILY SSF81886 614 914 3.4E-74 T 13-10-2018 IPR036266 SecA, Wing/Scaffold superfamily RPIT_10345 22e4f87bb094dfafa0bf595c26aa375e 304 Pfam PF00005 ABC transporter 24 161 5.5E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_10345 22e4f87bb094dfafa0bf595c26aa375e 304 Gene3D G3DSA:3.40.50.300 2 247 1.4E-56 T 13-10-2018 RPIT_10345 22e4f87bb094dfafa0bf595c26aa375e 304 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_10345 22e4f87bb094dfafa0bf595c26aa375e 304 SUPERFAMILY SSF52540 17 220 3.47E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10345 22e4f87bb094dfafa0bf595c26aa375e 304 SMART SM00382 33 209 3.1E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_10155 778112176fb2192e12b7ac847e9e4d13 300 PIRSF PIRSF001365 6 299 2.0E-69 T 13-10-2018 IPR002220 DapA-like GO:0016829 RPIT_10155 778112176fb2192e12b7ac847e9e4d13 300 Gene3D G3DSA:3.20.20.70 1 297 3.1E-91 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_10155 778112176fb2192e12b7ac847e9e4d13 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 45 66 9.2E-28 T 13-10-2018 IPR002220 DapA-like GO:0016829 RPIT_10155 778112176fb2192e12b7ac847e9e4d13 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 81 99 9.2E-28 T 13-10-2018 IPR002220 DapA-like GO:0016829 RPIT_10155 778112176fb2192e12b7ac847e9e4d13 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 113 129 9.2E-28 T 13-10-2018 IPR002220 DapA-like GO:0016829 RPIT_10155 778112176fb2192e12b7ac847e9e4d13 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 138 155 9.2E-28 T 13-10-2018 IPR002220 DapA-like GO:0016829 RPIT_10155 778112176fb2192e12b7ac847e9e4d13 300 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 48 65 - T 13-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RPIT_10155 778112176fb2192e12b7ac847e9e4d13 300 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 143 173 - T 13-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 RPIT_10155 778112176fb2192e12b7ac847e9e4d13 300 SUPERFAMILY SSF51569 6 297 1.88E-79 T 13-10-2018 RPIT_10155 778112176fb2192e12b7ac847e9e4d13 300 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 9 295 46.781 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RPIT_10155 778112176fb2192e12b7ac847e9e4d13 300 SMART SM01130 9 297 6.8E-92 T 13-10-2018 IPR002220 DapA-like GO:0016829 RPIT_10155 778112176fb2192e12b7ac847e9e4d13 300 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 13 285 7.1E-68 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RPIT_10155 778112176fb2192e12b7ac847e9e4d13 300 Pfam PF00701 Dihydrodipicolinate synthetase family 10 293 4.6E-70 T 13-10-2018 IPR002220 DapA-like GO:0016829 RPIT_01520 eaa1a2c4775ae6d5e340d655d9dcf8f3 166 SUPERFAMILY SSF53254 1 145 1.05E-22 T 13-10-2018 IPR029033 Histidine phosphatase superfamily RPIT_01520 eaa1a2c4775ae6d5e340d655d9dcf8f3 166 SMART SM00855 3 109 7.6E-9 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_01520 eaa1a2c4775ae6d5e340d655d9dcf8f3 166 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 75 7.1E-11 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_01520 eaa1a2c4775ae6d5e340d655d9dcf8f3 166 Gene3D G3DSA:3.40.50.1240 1 160 1.4E-40 T 13-10-2018 IPR029033 Histidine phosphatase superfamily RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 Gene3D G3DSA:3.40.250.10 453 543 7.2E-24 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 SUPERFAMILY SSF51905 6 317 4.17E-48 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 SUPERFAMILY SSF52821 435 542 1.22E-27 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 Pfam PF00581 Rhodanese-like domain 458 541 3.2E-12 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 Gene3D G3DSA:3.50.50.60 9 340 2.5E-172 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 Gene3D G3DSA:3.50.50.60 121 440 2.5E-172 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 SUPERFAMILY SSF55424 323 445 4.3E-31 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 SMART SM00450 452 546 1.7E-22 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 332 430 9.4E-15 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 286 7.6E-61 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 7.5E-16 T 13-10-2018 RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 7.5E-16 T 13-10-2018 RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 7.5E-16 T 13-10-2018 RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 7.5E-16 T 13-10-2018 RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 5.6E-23 T 13-10-2018 RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 112 130 5.6E-23 T 13-10-2018 RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 5.6E-23 T 13-10-2018 RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 5.6E-23 T 13-10-2018 RPIT_13620 fbf47413b1b9eb94c3e3e82f486138ca 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 5.6E-23 T 13-10-2018 RPIT_04080 51c03ce575a95edd0c1347108b7966f8 474 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 466 4.7E-24 T 13-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RPIT_04080 51c03ce575a95edd0c1347108b7966f8 474 Pfam PF00224 Pyruvate kinase, barrel domain 2 336 1.1E-130 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RPIT_04080 51c03ce575a95edd0c1347108b7966f8 474 ProSitePatterns PS00110 Pyruvate kinase active site signature. 213 225 - T 13-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RPIT_04080 51c03ce575a95edd0c1347108b7966f8 474 Gene3D G3DSA:2.40.33.10 70 167 3.0E-172 T 13-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RPIT_04080 51c03ce575a95edd0c1347108b7966f8 474 SUPERFAMILY SSF52935 321 468 1.96E-32 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RPIT_04080 51c03ce575a95edd0c1347108b7966f8 474 Gene3D G3DSA:3.20.20.60 2 333 3.0E-172 T 13-10-2018 RPIT_04080 51c03ce575a95edd0c1347108b7966f8 474 Gene3D G3DSA:3.40.1380.20 334 464 3.0E-172 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RPIT_04080 51c03ce575a95edd0c1347108b7966f8 474 SUPERFAMILY SSF51621 2 337 1.8E-97 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 RPIT_04080 51c03ce575a95edd0c1347108b7966f8 474 PRINTS PR01050 Pyruvate kinase family signature 267 291 1.6E-66 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RPIT_04080 51c03ce575a95edd0c1347108b7966f8 474 PRINTS PR01050 Pyruvate kinase family signature 292 310 1.6E-66 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RPIT_04080 51c03ce575a95edd0c1347108b7966f8 474 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.6E-66 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RPIT_04080 51c03ce575a95edd0c1347108b7966f8 474 PRINTS PR01050 Pyruvate kinase family signature 242 266 1.6E-66 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RPIT_04080 51c03ce575a95edd0c1347108b7966f8 474 PRINTS PR01050 Pyruvate kinase family signature 215 241 1.6E-66 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RPIT_04080 51c03ce575a95edd0c1347108b7966f8 474 PRINTS PR01050 Pyruvate kinase family signature 311 327 1.6E-66 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RPIT_04080 51c03ce575a95edd0c1347108b7966f8 474 PRINTS PR01050 Pyruvate kinase family signature 185 199 1.6E-66 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RPIT_04080 51c03ce575a95edd0c1347108b7966f8 474 SUPERFAMILY SSF50800 70 165 1.74E-29 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily RPIT_04080 51c03ce575a95edd0c1347108b7966f8 474 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 468 5.7E-164 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 RPIT_05705 41e383cadd421c9fa1b755e8b217f582 342 Pfam PF13439 Glycosyltransferase Family 4 18 171 1.2E-21 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RPIT_05705 41e383cadd421c9fa1b755e8b217f582 342 SUPERFAMILY SSF53756 8 338 9.87E-48 T 13-10-2018 RPIT_05705 41e383cadd421c9fa1b755e8b217f582 342 Pfam PF13692 Glycosyl transferases group 1 181 309 4.8E-18 T 13-10-2018 RPIT_05705 41e383cadd421c9fa1b755e8b217f582 342 Gene3D G3DSA:3.40.50.2000 16 336 1.9E-58 T 13-10-2018 RPIT_05705 41e383cadd421c9fa1b755e8b217f582 342 Gene3D G3DSA:3.40.50.2000 161 323 1.9E-58 T 13-10-2018 RPIT_06100 db20f9a8b35e72f796e11bbbf899e136 362 Gene3D G3DSA:1.10.3660.10 177 279 4.6E-25 T 13-10-2018 RPIT_06100 db20f9a8b35e72f796e11bbbf899e136 362 SUPERFAMILY SSF48179 173 267 5.89E-24 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 RPIT_06100 db20f9a8b35e72f796e11bbbf899e136 362 Gene3D G3DSA:3.40.50.720 7 176 2.4E-47 T 13-10-2018 RPIT_06100 db20f9a8b35e72f796e11bbbf899e136 362 SUPERFAMILY SSF55021 287 350 9.99E-6 T 13-10-2018 RPIT_06100 db20f9a8b35e72f796e11bbbf899e136 362 SUPERFAMILY SSF51735 9 169 3.05E-32 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_06100 db20f9a8b35e72f796e11bbbf899e136 362 Pfam PF02153 Prephenate dehydrogenase 23 258 1.8E-55 T 13-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 RPIT_04520 4b47a4b22cda9fc03b3003b5d5d40422 374 SUPERFAMILY SSF102114 119 346 3.66E-14 T 13-10-2018 RPIT_04520 4b47a4b22cda9fc03b3003b5d5d40422 374 PIRSF PIRSF006004 17 374 1.8E-118 T 13-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 RPIT_04520 4b47a4b22cda9fc03b3003b5d5d40422 374 Gene3D G3DSA:1.10.150.530 21 78 3.0E-8 T 13-10-2018 RPIT_04520 4b47a4b22cda9fc03b3003b5d5d40422 374 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 19 373 66.773 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 RPIT_04520 4b47a4b22cda9fc03b3003b5d5d40422 374 Gene3D G3DSA:3.20.20.70 83 358 1.4E-94 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_04520 4b47a4b22cda9fc03b3003b5d5d40422 374 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 22 369 1.1E-93 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 RPIT_04520 4b47a4b22cda9fc03b3003b5d5d40422 374 Pfam PF04055 Radical SAM superfamily 124 293 9.1E-12 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIT_01990 02d4c53178583b9c119e7cfd90098f12 79 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 4 76 2.1E-24 T 13-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RPIT_01990 02d4c53178583b9c119e7cfd90098f12 79 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 11 72 2.0E-18 T 13-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RPIT_01990 02d4c53178583b9c119e7cfd90098f12 79 SUPERFAMILY SSF82697 2 76 1.62E-22 T 13-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RPIT_01990 02d4c53178583b9c119e7cfd90098f12 79 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 78 18.574 T 13-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RPIT_01990 02d4c53178583b9c119e7cfd90098f12 79 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 4 77 1.2E-14 T 13-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RPIT_01990 02d4c53178583b9c119e7cfd90098f12 79 Gene3D G3DSA:3.30.1280.10 1 79 2.5E-23 T 13-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RPIT_01750 343605f70f0b18339573fdf7e048f3f0 287 Gene3D G3DSA:3.40.50.720 2 285 8.8E-85 T 13-10-2018 RPIT_01750 343605f70f0b18339573fdf7e048f3f0 287 SUPERFAMILY SSF51735 44 284 5.34E-76 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_01750 343605f70f0b18339573fdf7e048f3f0 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 231 3.1E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01750 343605f70f0b18339573fdf7e048f3f0 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 132 3.1E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01750 343605f70f0b18339573fdf7e048f3f0 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 46 63 3.1E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01750 343605f70f0b18339573fdf7e048f3f0 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 183 3.1E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01750 343605f70f0b18339573fdf7e048f3f0 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 212 3.1E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01750 343605f70f0b18339573fdf7e048f3f0 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 248 268 3.1E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01750 343605f70f0b18339573fdf7e048f3f0 287 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 180 208 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIT_01750 343605f70f0b18339573fdf7e048f3f0 287 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 51 283 2.4E-56 T 13-10-2018 RPIT_01230 2b9898b738d03ac70ed8cd96736f2b02 193 ProSitePatterns PS01236 PdxT/SNO family family signature. 41 51 - T 13-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RPIT_01230 2b9898b738d03ac70ed8cd96736f2b02 193 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 4 189 32.555 T 13-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RPIT_01230 2b9898b738d03ac70ed8cd96736f2b02 193 Gene3D G3DSA:3.40.50.880 1 192 8.3E-65 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_01230 2b9898b738d03ac70ed8cd96736f2b02 193 SUPERFAMILY SSF52317 2 188 7.08E-49 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_01230 2b9898b738d03ac70ed8cd96736f2b02 193 PIRSF PIRSF005639 1 192 2.0E-63 T 13-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RPIT_01230 2b9898b738d03ac70ed8cd96736f2b02 193 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 4 187 7.3E-57 T 13-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RPIT_01230 2b9898b738d03ac70ed8cd96736f2b02 193 Pfam PF01174 SNO glutamine amidotransferase family 6 188 1.4E-48 T 13-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RPIT_13465 e11aa025bb50538f0879f89b3fdeb1ed 89 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 1 79 3.7E-7 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RPIT_13465 e11aa025bb50538f0879f89b3fdeb1ed 89 Gene3D G3DSA:3.30.2310.20 1 83 5.9E-13 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily RPIT_10930 4830840d34cb2b27cfe2d8fd89467bd8 228 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 2.6E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_10930 4830840d34cb2b27cfe2d8fd89467bd8 228 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 2.6E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_10930 4830840d34cb2b27cfe2d8fd89467bd8 228 SUPERFAMILY SSF46689 14 92 1.25E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_10930 4830840d34cb2b27cfe2d8fd89467bd8 228 Gene3D G3DSA:1.10.357.10 12 227 9.0E-50 T 13-10-2018 RPIT_10930 4830840d34cb2b27cfe2d8fd89467bd8 228 SUPERFAMILY SSF48498 98 207 5.11E-7 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RPIT_10930 4830840d34cb2b27cfe2d8fd89467bd8 228 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 69 1.2E-16 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_03455 4b68d6d8782f7e2aed52131e72be726f 450 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 391 444 3.3E-13 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_03455 4b68d6d8782f7e2aed52131e72be726f 450 SUPERFAMILY SSF53738 4 183 7.85E-44 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_03455 4b68d6d8782f7e2aed52131e72be726f 450 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 1.7E-18 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_03455 4b68d6d8782f7e2aed52131e72be726f 450 SUPERFAMILY SSF53738 260 367 2.94E-30 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_03455 4b68d6d8782f7e2aed52131e72be726f 450 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 447 42.596 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_03455 4b68d6d8782f7e2aed52131e72be726f 450 Gene3D G3DSA:3.40.120.10 176 365 3.7E-64 T 13-10-2018 RPIT_03455 4b68d6d8782f7e2aed52131e72be726f 450 SUPERFAMILY SSF53738 158 258 3.02E-27 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_03455 4b68d6d8782f7e2aed52131e72be726f 450 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 445 4.7E-166 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_03455 4b68d6d8782f7e2aed52131e72be726f 450 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 368 2.6E-31 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_03455 4b68d6d8782f7e2aed52131e72be726f 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 2.6E-12 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_03455 4b68d6d8782f7e2aed52131e72be726f 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 2.6E-12 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_03455 4b68d6d8782f7e2aed52131e72be726f 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 2.6E-12 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_03455 4b68d6d8782f7e2aed52131e72be726f 450 Gene3D G3DSA:3.40.120.10 259 342 3.7E-64 T 13-10-2018 RPIT_03455 4b68d6d8782f7e2aed52131e72be726f 450 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 6.6E-39 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_03455 4b68d6d8782f7e2aed52131e72be726f 450 Gene3D G3DSA:3.40.120.10 1 150 1.3E-45 T 13-10-2018 RPIT_03455 4b68d6d8782f7e2aed52131e72be726f 450 SUPERFAMILY SSF55957 360 445 4.97E-22 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_03455 4b68d6d8782f7e2aed52131e72be726f 450 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_03455 4b68d6d8782f7e2aed52131e72be726f 450 Gene3D G3DSA:3.30.310.50 373 449 9.5E-23 T 13-10-2018 RPIT_01025 5809e448f147d801deae8b8d764b6217 117 Gene3D G3DSA:3.30.40.60 4 110 9.8E-20 T 13-10-2018 RPIT_01025 5809e448f147d801deae8b8d764b6217 117 Pfam PF14279 HNH endonuclease 41 81 2.2E-8 T 13-10-2018 IPR029471 HNH endonuclease 5 RPIT_02610 ce8f52d8569d8f6b28c7b839dabc6d29 211 SMART SM00382 32 208 4.5E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_02610 ce8f52d8569d8f6b28c7b839dabc6d29 211 Pfam PF00005 ABC transporter 25 163 5.9E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_02610 ce8f52d8569d8f6b28c7b839dabc6d29 211 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_02610 ce8f52d8569d8f6b28c7b839dabc6d29 211 SUPERFAMILY SSF52540 6 209 1.74E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_02610 ce8f52d8569d8f6b28c7b839dabc6d29 211 Gene3D G3DSA:3.40.50.300 2 210 1.2E-52 T 13-10-2018 RPIT_08685 ef26a6cea1e2664c9a0b4f2a0598047a 222 Hamap MF_00104 Ribonuclease 3 [rnc]. 1 213 27.277 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 RPIT_08685 ef26a6cea1e2664c9a0b4f2a0598047a 222 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 4 215 3.2E-67 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 RPIT_08685 ef26a6cea1e2664c9a0b4f2a0598047a 222 Pfam PF00035 Double-stranded RNA binding motif 152 216 9.8E-18 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain RPIT_08685 ef26a6cea1e2664c9a0b4f2a0598047a 222 SUPERFAMILY SSF54768 105 216 1.73E-26 T 13-10-2018 RPIT_08685 ef26a6cea1e2664c9a0b4f2a0598047a 222 SUPERFAMILY SSF69065 8 148 5.23E-46 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 RPIT_08685 ef26a6cea1e2664c9a0b4f2a0598047a 222 ProSitePatterns PS00517 Ribonuclease III family signature. 33 41 - T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 RPIT_08685 ef26a6cea1e2664c9a0b4f2a0598047a 222 Gene3D G3DSA:3.30.160.20 150 218 7.8E-24 T 13-10-2018 RPIT_08685 ef26a6cea1e2664c9a0b4f2a0598047a 222 Gene3D G3DSA:1.10.1520.10 1 143 1.6E-43 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 RPIT_08685 ef26a6cea1e2664c9a0b4f2a0598047a 222 SMART SM00358 151 217 5.1E-22 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain RPIT_08685 ef26a6cea1e2664c9a0b4f2a0598047a 222 Pfam PF14622 Ribonuclease-III-like 10 133 3.2E-34 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 RPIT_08685 ef26a6cea1e2664c9a0b4f2a0598047a 222 SMART SM00535 11 144 3.5E-51 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 RPIT_02730 af8494130ba77f2b4e6899097b6e08c5 590 Gene3D G3DSA:3.40.50.300 352 549 3.0E-73 T 13-10-2018 RPIT_02730 af8494130ba77f2b4e6899097b6e08c5 590 Gene3D G3DSA:3.40.50.10810 133 346 8.9E-68 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily RPIT_02730 af8494130ba77f2b4e6899097b6e08c5 590 SMART SM00487 128 324 5.7E-27 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIT_02730 af8494130ba77f2b4e6899097b6e08c5 590 SUPERFAMILY SSF52540 113 345 3.13E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_02730 af8494130ba77f2b4e6899097b6e08c5 590 SUPERFAMILY SSF52540 346 589 4.03E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_02730 af8494130ba77f2b4e6899097b6e08c5 590 Pfam PF00176 SNF2 family N-terminal domain 147 413 1.8E-60 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 RPIT_02730 af8494130ba77f2b4e6899097b6e08c5 590 Gene3D G3DSA:1.20.120.850 367 584 3.0E-73 T 13-10-2018 RPIT_02730 af8494130ba77f2b4e6899097b6e08c5 590 Pfam PF00271 Helicase conserved C-terminal domain 426 535 3.1E-15 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_02730 af8494130ba77f2b4e6899097b6e08c5 590 SMART SM00490 455 535 1.1E-17 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_14745 8a2340a78dcc66919640e0870968ee0a 387 SUPERFAMILY SSF51658 4 384 4.06E-97 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily RPIT_14745 8a2340a78dcc66919640e0870968ee0a 387 Pfam PF01261 Xylose isomerase-like TIM barrel 36 260 1.0E-19 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain RPIT_14745 8a2340a78dcc66919640e0870968ee0a 387 Gene3D G3DSA:3.20.20.150 1 387 8.3E-117 T 13-10-2018 RPIT_14745 8a2340a78dcc66919640e0870968ee0a 387 TIGRFAM TIGR02631 xylA_Arthro: xylose isomerase 3 385 2.0E-163 T 13-10-2018 IPR013453 Xylose isomerase, actinobacteria GO:0009045|GO:0042732 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RPIT_14745 8a2340a78dcc66919640e0870968ee0a 387 PRINTS PR00688 Xylose isomerase signature 243 254 2.2E-50 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RPIT_14745 8a2340a78dcc66919640e0870968ee0a 387 PRINTS PR00688 Xylose isomerase signature 151 170 2.2E-50 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RPIT_14745 8a2340a78dcc66919640e0870968ee0a 387 PRINTS PR00688 Xylose isomerase signature 77 97 2.2E-50 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RPIT_14745 8a2340a78dcc66919640e0870968ee0a 387 PRINTS PR00688 Xylose isomerase signature 124 145 2.2E-50 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RPIT_14745 8a2340a78dcc66919640e0870968ee0a 387 PRINTS PR00688 Xylose isomerase signature 215 242 2.2E-50 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RPIT_14745 8a2340a78dcc66919640e0870968ee0a 387 PRINTS PR00688 Xylose isomerase signature 40 62 2.2E-50 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RPIT_14745 8a2340a78dcc66919640e0870968ee0a 387 PRINTS PR00688 Xylose isomerase signature 100 119 2.2E-50 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RPIT_14745 8a2340a78dcc66919640e0870968ee0a 387 PRINTS PR00688 Xylose isomerase signature 173 197 2.2E-50 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RPIT_14745 8a2340a78dcc66919640e0870968ee0a 387 PRINTS PR00688 Xylose isomerase signature 284 295 2.2E-50 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 RPIT_04645 3b33cf3aaf616343f19fbc42dab83f48 243 SUPERFAMILY SSF51735 1 130 4.56E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_04645 3b33cf3aaf616343f19fbc42dab83f48 243 SUPERFAMILY SSF55347 104 213 4.14E-37 T 13-10-2018 RPIT_04645 3b33cf3aaf616343f19fbc42dab83f48 243 Gene3D G3DSA:3.30.360.10 104 211 9.6E-80 T 13-10-2018 RPIT_04645 3b33cf3aaf616343f19fbc42dab83f48 243 PIRSF PIRSF000161 1 243 6.7E-68 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RPIT_04645 3b33cf3aaf616343f19fbc42dab83f48 243 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 242 28.578 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RPIT_04645 3b33cf3aaf616343f19fbc42dab83f48 243 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 125 142 - T 13-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RPIT_04645 3b33cf3aaf616343f19fbc42dab83f48 243 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 106 241 2.7E-30 T 13-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RPIT_04645 3b33cf3aaf616343f19fbc42dab83f48 243 Gene3D G3DSA:3.40.50.720 3 232 9.6E-80 T 13-10-2018 RPIT_04645 3b33cf3aaf616343f19fbc42dab83f48 243 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 44 242 4.5E-56 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RPIT_04645 3b33cf3aaf616343f19fbc42dab83f48 243 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 103 9.6E-25 T 13-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 Gene3D G3DSA:2.70.150.10 21 239 0.0 T 13-10-2018 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 SUPERFAMILY SSF56784 339 770 1.28E-58 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 Pfam PF00689 Cation transporting ATPase, C-terminus 750 925 1.0E-47 T 13-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 617 737 1.7E-34 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 95 361 1.9E-38 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 Gene3D G3DSA:3.40.50.1000 338 698 0.0 T 13-10-2018 IPR023214 HAD superfamily RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 Gene3D G3DSA:3.40.1110.10 351 558 0.0 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 SMART SM00831 8 82 3.6E-19 T 13-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 SUPERFAMILY SSF81653 127 235 9.15E-27 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 343 349 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 Pfam PF00122 E1-E2 ATPase 124 321 8.7E-49 T 13-10-2018 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 Pfam PF00690 Cation transporter/ATPase, N-terminus 11 77 8.3E-19 T 13-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 SUPERFAMILY SSF81665 11 931 3.53E-118 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 Pfam PF00702 haloacid dehalogenase-like hydrolase 339 667 2.3E-22 T 13-10-2018 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 SUPERFAMILY SSF81660 348 555 4.58E-53 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 Gene3D G3DSA:1.20.1110.10 60 924 0.0 T 13-10-2018 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 551 562 2.9E-36 T 13-10-2018 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 341 355 2.9E-36 T 13-10-2018 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 653 672 2.9E-36 T 13-10-2018 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 174 188 2.9E-36 T 13-10-2018 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 677 689 2.9E-36 T 13-10-2018 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 573 583 2.9E-36 T 13-10-2018 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 685 710 8.7E-19 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 653 669 8.7E-19 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 501 519 8.7E-19 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_12680 8ce5c9b865897a0ea2d352bcac0aec61 944 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 625 641 8.7E-19 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_10380 0b974b79831b2b94113509b134f437cd 278 SUPERFAMILY SSF52141 60 273 1.37E-39 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RPIT_10380 0b974b79831b2b94113509b134f437cd 278 Pfam PF03167 Uracil DNA glycosylase superfamily 93 269 1.2E-26 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RPIT_10380 0b974b79831b2b94113509b134f437cd 278 SMART SM00986 93 269 3.1E-31 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RPIT_10380 0b974b79831b2b94113509b134f437cd 278 Gene3D G3DSA:3.40.470.10 50 275 5.4E-61 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RPIT_10380 0b974b79831b2b94113509b134f437cd 278 SMART SM00987 93 269 3.1E-31 T 13-10-2018 RPIT_14025 2199ef5e20e8a2d1f53513867d5261e1 521 SUPERFAMILY SSF90123 10 431 4.05E-19 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_14025 2199ef5e20e8a2d1f53513867d5261e1 521 Gene3D G3DSA:3.40.50.300 277 517 1.3E-82 T 13-10-2018 RPIT_14025 2199ef5e20e8a2d1f53513867d5261e1 521 SMART SM00382 307 501 7.3E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_14025 2199ef5e20e8a2d1f53513867d5261e1 521 Pfam PF00005 ABC transporter 298 447 5.3E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_14025 2199ef5e20e8a2d1f53513867d5261e1 521 ProSitePatterns PS00211 ABC transporters family signature. 419 433 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_14025 2199ef5e20e8a2d1f53513867d5261e1 521 Gene3D G3DSA:1.20.1560.10 2 266 7.7E-12 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_14025 2199ef5e20e8a2d1f53513867d5261e1 521 SUPERFAMILY SSF52540 276 513 4.39E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04430 967e48e7bd649eb653dfb48948885f36 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 235 2.2E-59 T 13-10-2018 RPIT_04430 967e48e7bd649eb653dfb48948885f36 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.2E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_04430 967e48e7bd649eb653dfb48948885f36 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.2E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_04430 967e48e7bd649eb653dfb48948885f36 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.2E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_04430 967e48e7bd649eb653dfb48948885f36 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.2E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_04430 967e48e7bd649eb653dfb48948885f36 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 1.2E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_04430 967e48e7bd649eb653dfb48948885f36 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.2E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_04430 967e48e7bd649eb653dfb48948885f36 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 181 2.0E-7 T 13-10-2018 RPIT_04430 967e48e7bd649eb653dfb48948885f36 239 SUPERFAMILY SSF51735 7 235 3.86E-80 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_04430 967e48e7bd649eb653dfb48948885f36 239 Gene3D G3DSA:3.40.50.720 3 239 2.2E-80 T 13-10-2018 RPIT_04430 967e48e7bd649eb653dfb48948885f36 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 3.2E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_04430 967e48e7bd649eb653dfb48948885f36 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 3.2E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_04430 967e48e7bd649eb653dfb48948885f36 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 3.2E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_08440 e4a2fb8c59a6214203365362b1a88dd3 370 Pfam PF00512 His Kinase A (phospho-acceptor) domain 145 209 2.1E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIT_08440 e4a2fb8c59a6214203365362b1a88dd3 370 Gene3D G3DSA:3.30.565.10 208 368 3.0E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_08440 e4a2fb8c59a6214203365362b1a88dd3 370 SMART SM00387 253 366 2.4E-39 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_08440 e4a2fb8c59a6214203365362b1a88dd3 370 SMART SM00388 145 209 2.3E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIT_08440 e4a2fb8c59a6214203365362b1a88dd3 370 SUPERFAMILY SSF47384 128 210 7.85E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 RPIT_08440 e4a2fb8c59a6214203365362b1a88dd3 370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 290 304 4.0E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_08440 e4a2fb8c59a6214203365362b1a88dd3 370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 343 4.0E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_08440 e4a2fb8c59a6214203365362b1a88dd3 370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 318 4.0E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_08440 e4a2fb8c59a6214203365362b1a88dd3 370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 363 4.0E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_08440 e4a2fb8c59a6214203365362b1a88dd3 370 Pfam PF00672 HAMP domain 92 140 1.5E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 RPIT_08440 e4a2fb8c59a6214203365362b1a88dd3 370 SUPERFAMILY SSF55874 199 364 4.58E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_08440 e4a2fb8c59a6214203365362b1a88dd3 370 SMART SM00304 92 144 3.8E-13 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 RPIT_08440 e4a2fb8c59a6214203365362b1a88dd3 370 Gene3D G3DSA:1.10.287.130 89 205 3.2E-21 T 13-10-2018 RPIT_08440 e4a2fb8c59a6214203365362b1a88dd3 370 SUPERFAMILY SSF158472 92 141 4.97E-8 T 13-10-2018 RPIT_08440 e4a2fb8c59a6214203365362b1a88dd3 370 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 254 365 3.3E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_00805 3bdd3ceea298e091a0ec78fd03c96086 756 SMART SM01060 82 470 3.5E-245 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 RPIT_00805 3bdd3ceea298e091a0ec78fd03c96086 756 Gene3D G3DSA:2.40.180.10 4 492 9.1E-191 T 13-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RPIT_00805 3bdd3ceea298e091a0ec78fd03c96086 756 Pfam PF00199 Catalase 82 467 2.3E-163 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 RPIT_00805 3bdd3ceea298e091a0ec78fd03c96086 756 SUPERFAMILY SSF52317 593 746 4.85E-8 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_00805 3bdd3ceea298e091a0ec78fd03c96086 756 PIRSF PIRSF038927 67 753 1.8E-284 T 13-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 RPIT_00805 3bdd3ceea298e091a0ec78fd03c96086 756 SUPERFAMILY SSF56634 75 571 2.36E-203 T 13-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 RPIT_00805 3bdd3ceea298e091a0ec78fd03c96086 756 ProSitePatterns PS00438 Catalase proximal active site signature. 118 134 - T 13-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 RPIT_00805 3bdd3ceea298e091a0ec78fd03c96086 756 Gene3D G3DSA:3.40.50.880 591 753 1.2E-27 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_00805 3bdd3ceea298e091a0ec78fd03c96086 756 Pfam PF06628 Catalase-related immune-responsive 497 561 1.6E-21 T 13-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 RPIT_00805 3bdd3ceea298e091a0ec78fd03c96086 756 Gene3D G3DSA:1.20.1370.20 493 586 5.1E-28 T 13-10-2018 RPIT_00805 3bdd3ceea298e091a0ec78fd03c96086 756 PRINTS PR00067 Catalase signature 367 394 3.3E-66 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 RPIT_00805 3bdd3ceea298e091a0ec78fd03c96086 756 PRINTS PR00067 Catalase signature 399 425 3.3E-66 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 RPIT_00805 3bdd3ceea298e091a0ec78fd03c96086 756 PRINTS PR00067 Catalase signature 157 175 3.3E-66 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 RPIT_00805 3bdd3ceea298e091a0ec78fd03c96086 756 PRINTS PR00067 Catalase signature 178 195 3.3E-66 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 RPIT_00805 3bdd3ceea298e091a0ec78fd03c96086 756 PRINTS PR00067 Catalase signature 95 118 3.3E-66 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 RPIT_00805 3bdd3ceea298e091a0ec78fd03c96086 756 PRINTS PR00067 Catalase signature 197 215 3.3E-66 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 RPIT_00805 3bdd3ceea298e091a0ec78fd03c96086 756 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 412 420 - T 13-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 RPIT_03140 b2795a382056d3a64ac953f611fc5445 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 13-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03140 b2795a382056d3a64ac953f611fc5445 122 SMART SM01374 1 122 1.9E-88 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RPIT_03140 b2795a382056d3a64ac953f611fc5445 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 4.9E-59 T 13-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 RPIT_03140 b2795a382056d3a64ac953f611fc5445 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.905 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RPIT_03140 b2795a382056d3a64ac953f611fc5445 122 Gene3D G3DSA:2.40.150.20 1 122 2.0E-54 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 RPIT_03140 b2795a382056d3a64ac953f611fc5445 122 SUPERFAMILY SSF50193 1 122 1.22E-51 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 RPIT_03140 b2795a382056d3a64ac953f611fc5445 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 6.4E-56 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RPIT_03450 e0c86506f4a1eefe99881505c69dfcc7 176 Pfam PF00380 Ribosomal protein S9/S16 55 176 1.6E-44 T 13-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 RPIT_03450 e0c86506f4a1eefe99881505c69dfcc7 176 SUPERFAMILY SSF54211 53 176 6.45E-44 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RPIT_03450 e0c86506f4a1eefe99881505c69dfcc7 176 Gene3D G3DSA:3.30.230.10 50 176 1.7E-48 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIT_03450 e0c86506f4a1eefe99881505c69dfcc7 176 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 46 176 32.613 T 13-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid RPIT_03450 e0c86506f4a1eefe99881505c69dfcc7 176 ProSitePatterns PS00360 Ribosomal protein S9 signature. 114 132 - T 13-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 RPIT_04670 c6ddb8a44b9b198ca30918fd01814546 83 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.5E-34 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_04670 c6ddb8a44b9b198ca30918fd01814546 83 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.5E-34 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_04670 c6ddb8a44b9b198ca30918fd01814546 83 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.5E-34 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_04670 c6ddb8a44b9b198ca30918fd01814546 83 SUPERFAMILY SSF110324 2 79 1.64E-30 T 13-10-2018 RPIT_04670 c6ddb8a44b9b198ca30918fd01814546 83 Pfam PF01016 Ribosomal L27 protein 2 80 8.1E-35 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_04670 c6ddb8a44b9b198ca30918fd01814546 83 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 13-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_04670 c6ddb8a44b9b198ca30918fd01814546 83 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 80 4.3E-34 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_04670 c6ddb8a44b9b198ca30918fd01814546 83 Gene3D G3DSA:2.40.50.100 21 83 2.6E-25 T 13-10-2018 RPIT_04670 c6ddb8a44b9b198ca30918fd01814546 83 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 83 26.905 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_04670 c6ddb8a44b9b198ca30918fd01814546 83 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 3.0E-14 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_11115 fdbdfa44de6d60c8113745f642110553 229 SUPERFAMILY SSF46785 2 62 1.56E-12 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_11115 fdbdfa44de6d60c8113745f642110553 229 Gene3D G3DSA:1.10.10.10 1 139 4.9E-49 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_11115 fdbdfa44de6d60c8113745f642110553 229 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 65 133 2.4E-27 T 13-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RPIT_11115 fdbdfa44de6d60c8113745f642110553 229 SMART SM00529 26 125 4.1E-42 T 13-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 RPIT_11115 fdbdfa44de6d60c8113745f642110553 229 SUPERFAMILY SSF47979 65 134 5.89E-24 T 13-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 RPIT_11115 fdbdfa44de6d60c8113745f642110553 229 SUPERFAMILY SSF50037 130 226 1.65E-14 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal RPIT_11115 fdbdfa44de6d60c8113745f642110553 229 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 3 60 2.9E-18 T 13-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 RPIT_09730 fd91c7d8dd5124e09bcf4b0394ecef3f 593 Gene3D G3DSA:3.40.50.620 7 394 4.3E-145 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_09730 fd91c7d8dd5124e09bcf4b0394ecef3f 593 SUPERFAMILY SSF52374 6 399 2.4E-93 T 13-10-2018 RPIT_09730 fd91c7d8dd5124e09bcf4b0394ecef3f 593 SUPERFAMILY SSF57770 139 173 2.62E-12 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RPIT_09730 fd91c7d8dd5124e09bcf4b0394ecef3f 593 Gene3D G3DSA:1.10.730.10 395 585 2.7E-38 T 13-10-2018 RPIT_09730 fd91c7d8dd5124e09bcf4b0394ecef3f 593 Pfam PF09334 tRNA synthetases class I (M) 5 411 7.8E-144 T 13-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_09730 fd91c7d8dd5124e09bcf4b0394ecef3f 593 Gene3D G3DSA:2.20.28.20 139 173 4.3E-145 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RPIT_09730 fd91c7d8dd5124e09bcf4b0394ecef3f 593 Hamap MF_00098 Methionine--tRNA ligase [metG]. 2 589 37.993 T 13-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RPIT_09730 fd91c7d8dd5124e09bcf4b0394ecef3f 593 SUPERFAMILY SSF47323 400 578 2.99E-34 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_09730 fd91c7d8dd5124e09bcf4b0394ecef3f 593 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 526 1.8E-147 T 13-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RPIT_09730 fd91c7d8dd5124e09bcf4b0394ecef3f 593 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 2.5E-26 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RPIT_09730 fd91c7d8dd5124e09bcf4b0394ecef3f 593 PRINTS PR01041 Methionyl-tRNA synthetase signature 252 263 2.5E-26 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RPIT_09730 fd91c7d8dd5124e09bcf4b0394ecef3f 593 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 2.5E-26 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RPIT_09730 fd91c7d8dd5124e09bcf4b0394ecef3f 593 PRINTS PR01041 Methionyl-tRNA synthetase signature 399 410 2.5E-26 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RPIT_09730 fd91c7d8dd5124e09bcf4b0394ecef3f 593 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 2.5E-26 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RPIT_09730 fd91c7d8dd5124e09bcf4b0394ecef3f 593 PRINTS PR01041 Methionyl-tRNA synthetase signature 6 19 2.5E-26 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RPIT_12875 5b365b49b55231513b4d7363c7672890 137 Pfam PF01042 Endoribonuclease L-PSP 3 99 1.8E-10 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 RPIT_12875 5b365b49b55231513b4d7363c7672890 137 Gene3D G3DSA:3.30.1330.40 1 101 1.5E-16 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 RPIT_12875 5b365b49b55231513b4d7363c7672890 137 SUPERFAMILY SSF55298 2 99 6.91E-17 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 RPIT_13760 9ddf002e46ef92ade9c79a88c991a0d1 383 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 15 373 2.6E-95 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RPIT_13760 9ddf002e46ef92ade9c79a88c991a0d1 383 Gene3D G3DSA:3.40.640.10 2 249 5.0E-83 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_13760 9ddf002e46ef92ade9c79a88c991a0d1 383 Gene3D G3DSA:3.90.1150.10 250 382 8.3E-32 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_13760 9ddf002e46ef92ade9c79a88c991a0d1 383 SUPERFAMILY SSF53383 5 378 1.18E-97 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_13760 9ddf002e46ef92ade9c79a88c991a0d1 383 PIRSF PIRSF000390 2 381 8.9E-96 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RPIT_07965 2dc2c9b6fc8fdce784b19e7277b34b7c 167 Gene3D G3DSA:3.30.70.1150 84 163 1.9E-27 T 13-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal RPIT_07965 2dc2c9b6fc8fdce784b19e7277b34b7c 167 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 3 158 1.7E-54 T 13-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 RPIT_07965 2dc2c9b6fc8fdce784b19e7277b34b7c 167 Pfam PF13710 ACT domain 13 75 2.7E-16 T 13-10-2018 RPIT_07965 2dc2c9b6fc8fdce784b19e7277b34b7c 167 Pfam PF10369 Small subunit of acetolactate synthase 85 158 1.2E-25 T 13-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 RPIT_07965 2dc2c9b6fc8fdce784b19e7277b34b7c 167 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 4 78 6.0E-25 T 13-10-2018 RPIT_07965 2dc2c9b6fc8fdce784b19e7277b34b7c 167 SUPERFAMILY SSF55021 4 76 1.4E-20 T 13-10-2018 RPIT_07965 2dc2c9b6fc8fdce784b19e7277b34b7c 167 Gene3D G3DSA:3.30.70.260 1 79 1.6E-33 T 13-10-2018 RPIT_07965 2dc2c9b6fc8fdce784b19e7277b34b7c 167 SUPERFAMILY SSF55021 81 161 2.75E-23 T 13-10-2018 RPIT_09410 8b27bcf29d5020db50833adbd2148ae3 159 Gene3D G3DSA:3.40.30.10 5 158 1.0E-40 T 13-10-2018 RPIT_09410 8b27bcf29d5020db50833adbd2148ae3 159 PIRSF PIRSF000239 2 156 7.2E-23 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RPIT_09410 8b27bcf29d5020db50833adbd2148ae3 159 Pfam PF00578 AhpC/TSA family 8 130 1.3E-33 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RPIT_09410 8b27bcf29d5020db50833adbd2148ae3 159 SUPERFAMILY SSF52833 5 157 1.27E-42 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 Gene3D G3DSA:3.50.50.60 9 306 7.8E-119 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 297 9.5E-48 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 Gene3D G3DSA:3.50.50.60 125 247 7.8E-119 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 SUPERFAMILY SSF51905 1 307 2.42E-53 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 308 3.7E-122 T 13-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 236 257 1.5E-77 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.5E-77 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 131 143 1.5E-77 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 1.5E-77 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 42 57 1.5E-77 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 146 170 1.5E-77 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 271 289 1.5E-77 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 63 73 1.5E-77 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 1.5E-77 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 138 158 - T 13-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 3.1E-36 T 13-10-2018 RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 3.1E-36 T 13-10-2018 RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.1E-36 T 13-10-2018 RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 3.1E-36 T 13-10-2018 RPIT_13530 9b0f47d477370b553316c2c50556e0b7 313 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 3.1E-36 T 13-10-2018 RPIT_12005 3a7451c6a4bffd55ffbc719b6ddd1d55 945 Gene3D G3DSA:2.60.120.560 696 853 2.1E-38 T 13-10-2018 RPIT_12005 3a7451c6a4bffd55ffbc719b6ddd1d55 945 SUPERFAMILY SSF49899 687 850 4.19E-30 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RPIT_12005 3a7451c6a4bffd55ffbc719b6ddd1d55 945 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 26 39 - T 13-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 RPIT_12005 3a7451c6a4bffd55ffbc719b6ddd1d55 945 SMART SM00640 26 814 1.7E-139 T 13-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 RPIT_12005 3a7451c6a4bffd55ffbc719b6ddd1d55 945 SUPERFAMILY SSF75005 18 688 3.77E-95 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RPIT_12005 3a7451c6a4bffd55ffbc719b6ddd1d55 945 Gene3D G3DSA:2.115.10.20 16 301 1.0E-97 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RPIT_12005 3a7451c6a4bffd55ffbc719b6ddd1d55 945 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 616 684 1.4E-14 T 13-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal RPIT_12005 3a7451c6a4bffd55ffbc719b6ddd1d55 945 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 26 276 1.8E-69 T 13-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal RPIT_12005 3a7451c6a4bffd55ffbc719b6ddd1d55 945 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 693 846 9.9E-29 T 13-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal RPIT_12005 3a7451c6a4bffd55ffbc719b6ddd1d55 945 Gene3D G3DSA:2.115.10.20 558 695 8.9E-22 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 SUPERFAMILY SSF51445 98 551 3.56E-85 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 SMART SM00642 100 545 5.0E-84 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 SUPERFAMILY SSF49313 1844 1927 1.88E-12 T 13-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 Gene3D G3DSA:2.60.40.10 1840 1927 2.3E-19 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 1086 1170 4.8E-7 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 Gene3D G3DSA:3.20.20.80 1185 1761 3.9E-221 T 13-10-2018 RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 SUPERFAMILY SSF51011 559 634 7.58E-7 T 13-10-2018 RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 Gene3D G3DSA:2.60.40.10 1077 1184 2.8E-23 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 SUPERFAMILY SSF51011 1730 1833 5.76E-23 T 13-10-2018 RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 SUPERFAMILY SSF81296 951 1076 5.74E-20 T 13-10-2018 IPR014756 Immunoglobulin E-set RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 Gene3D G3DSA:2.60.40.1180 548 636 3.2E-14 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 Gene3D G3DSA:2.60.40.1130 959 1075 1.7E-21 T 13-10-2018 RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 Pfam PF00128 Alpha amylase, catalytic domain 138 493 3.9E-73 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 Gene3D G3DSA:3.20.20.80 90 517 2.9E-99 T 13-10-2018 RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 SUPERFAMILY SSF81296 1084 1187 1.6E-19 T 13-10-2018 IPR014756 Immunoglobulin E-set RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 Gene3D G3DSA:2.60.40.1180 1762 1833 5.1E-16 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 SUPERFAMILY SSF51445 1182 1729 1.53E-124 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 Pfam PF05345 Putative Ig domain 1875 1914 1.6E-8 T 13-10-2018 IPR008009 Putative Ig RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 960 1831 2.4E-303 T 13-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 Gene3D G3DSA:2.60.40.10 855 957 1.8E-26 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 Gene3D G3DSA:2.60.40.10 1 75 1.6E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 Gene3D G3DSA:2.60.40.10 756 854 3.2E-25 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_11940 41e135307f6dbfb78d284ff695af35d1 2074 Pfam PF11852 Domain of unknown function (DUF3372) 1670 1831 1.6E-48 T 13-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal RPIT_06675 82c7af9d0c051bffe557b06f59f90c81 545 SUPERFAMILY SSF52540 100 383 3.46E-92 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06675 82c7af9d0c051bffe557b06f59f90c81 545 Gene3D G3DSA:1.20.150.20 385 514 2.2E-43 T 13-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06675 82c7af9d0c051bffe557b06f59f90c81 545 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 6 512 6.1E-230 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06675 82c7af9d0c051bffe557b06f59f90c81 545 SUPERFAMILY SSF47917 386 512 1.46E-41 T 13-10-2018 RPIT_06675 82c7af9d0c051bffe557b06f59f90c81 545 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 384 508 2.8E-41 T 13-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06675 82c7af9d0c051bffe557b06f59f90c81 545 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 368 377 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 RPIT_06675 82c7af9d0c051bffe557b06f59f90c81 545 Gene3D G3DSA:2.40.30.20 4 97 1.9E-28 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 RPIT_06675 82c7af9d0c051bffe557b06f59f90c81 545 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 154 377 1.8E-66 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 RPIT_06675 82c7af9d0c051bffe557b06f59f90c81 545 Gene3D G3DSA:3.40.50.300 98 384 1.4E-113 T 13-10-2018 RPIT_06675 82c7af9d0c051bffe557b06f59f90c81 545 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 4 513 47.604 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06675 82c7af9d0c051bffe557b06f59f90c81 545 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 31 96 2.5E-13 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 RPIT_06675 82c7af9d0c051bffe557b06f59f90c81 545 SUPERFAMILY SSF50615 27 98 2.35E-22 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 RPIT_05820 9f7e12a49ad4917efb91786eb3d27313 506 Pfam PF01068 ATP dependent DNA ligase domain 185 371 3.3E-38 T 13-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 RPIT_05820 9f7e12a49ad4917efb91786eb3d27313 506 SUPERFAMILY SSF117018 4 194 1.57E-26 T 13-10-2018 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily GO:0003677|GO:0003910|GO:0006281|GO:0006310 RPIT_05820 9f7e12a49ad4917efb91786eb3d27313 506 Gene3D G3DSA:3.30.470.30 182 371 6.1E-46 T 13-10-2018 RPIT_05820 9f7e12a49ad4917efb91786eb3d27313 506 TIGRFAM TIGR00574 dnl1: DNA ligase I, ATP-dependent (dnl1) 51 504 5.4E-74 T 13-10-2018 IPR000977 DNA ligase, ATP-dependent GO:0003910|GO:0005524|GO:0006281|GO:0006310|GO:0071897 RPIT_05820 9f7e12a49ad4917efb91786eb3d27313 506 Pfam PF04679 ATP dependent DNA ligase C terminal region 390 485 8.6E-8 T 13-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 RPIT_05820 9f7e12a49ad4917efb91786eb3d27313 506 SUPERFAMILY SSF50249 375 505 7.2E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_05820 9f7e12a49ad4917efb91786eb3d27313 506 Pfam PF04675 DNA ligase N terminus 64 139 8.9E-7 T 13-10-2018 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 RPIT_05820 9f7e12a49ad4917efb91786eb3d27313 506 Gene3D G3DSA:1.10.3260.10 1 180 4.5E-36 T 13-10-2018 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily GO:0003677|GO:0003910|GO:0006281|GO:0006310 RPIT_05820 9f7e12a49ad4917efb91786eb3d27313 506 Gene3D G3DSA:2.40.50.140 373 506 1.2E-24 T 13-10-2018 RPIT_05820 9f7e12a49ad4917efb91786eb3d27313 506 SUPERFAMILY SSF56091 181 371 1.04E-39 T 13-10-2018 RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 Pfam PF00679 Elongation factor G C-terminus 410 492 1.5E-22 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 SUPERFAMILY SSF50447 196 315 1.06E-28 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 Gene3D G3DSA:3.30.70.240 403 495 3.7E-121 T 13-10-2018 RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 612 2.2E-270 T 13-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 PRINTS PR00315 GTP-binding elongation factor signature 53 61 2.7E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.7E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 PRINTS PR00315 GTP-binding elongation factor signature 130 139 2.7E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 PRINTS PR00315 GTP-binding elongation factor signature 9 22 2.7E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.7E-16 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 SUPERFAMILY SSF54980 317 401 2.06E-11 T 13-10-2018 IPR035647 EF-G domain III/V-like RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 Pfam PF00009 Elongation factor Tu GTP binding domain 6 209 2.7E-53 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 Gene3D G3DSA:3.40.50.300 4 212 1.2E-57 T 13-10-2018 RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 Pfam PF03144 Elongation factor Tu domain 2 233 302 1.4E-9 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 Gene3D G3DSA:3.30.70.870 321 603 3.7E-121 T 13-10-2018 RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 Gene3D G3DSA:2.40.50.250 496 612 3.7E-121 T 13-10-2018 RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 141 9.3E-25 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 Gene3D G3DSA:2.40.30.10 214 313 1.6E-28 T 13-10-2018 RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 SUPERFAMILY SSF52540 3 183 1.65E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01845 8071826a04e210e83e2b6b716076a0e1 620 SUPERFAMILY SSF54980 412 526 3.6E-29 T 13-10-2018 IPR035647 EF-G domain III/V-like RPIT_04435 dbbb7e1750cd81b8b81a9e3957a3a797 257 Gene3D G3DSA:3.40.50.720 1 255 2.2E-39 T 13-10-2018 RPIT_04435 dbbb7e1750cd81b8b81a9e3957a3a797 257 SUPERFAMILY SSF51735 5 253 1.27E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_04435 dbbb7e1750cd81b8b81a9e3957a3a797 257 PIRSF PIRSF000094 1 257 5.7E-71 T 13-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 RPIT_04435 dbbb7e1750cd81b8b81a9e3957a3a797 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 3.7E-58 T 13-10-2018 RPIT_04600 94e9b562c116636d46d7d21704011597 958 Pfam PF00009 Elongation factor Tu GTP binding domain 457 617 2.6E-33 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_04600 94e9b562c116636d46d7d21704011597 958 Gene3D G3DSA:2.40.30.10 629 748 5.5E-41 T 13-10-2018 RPIT_04600 94e9b562c116636d46d7d21704011597 958 SUPERFAMILY SSF52156 738 866 9.68E-33 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily RPIT_04600 94e9b562c116636d46d7d21704011597 958 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 373 417 2.7E-6 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal RPIT_04600 94e9b562c116636d46d7d21704011597 958 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 5 50 2.9E-7 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal RPIT_04600 94e9b562c116636d46d7d21704011597 958 SUPERFAMILY SSF50447 629 713 9.82E-25 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily RPIT_04600 94e9b562c116636d46d7d21704011597 958 SUPERFAMILY SSF52540 450 619 1.08E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04600 94e9b562c116636d46d7d21704011597 958 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 957 16.807 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 RPIT_04600 94e9b562c116636d46d7d21704011597 958 Gene3D G3DSA:3.40.50.300 449 628 2.2E-67 T 13-10-2018 RPIT_04600 94e9b562c116636d46d7d21704011597 958 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 455 613 7.8E-26 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RPIT_04600 94e9b562c116636d46d7d21704011597 958 Gene3D G3DSA:2.40.30.10 861 958 1.2E-31 T 13-10-2018 RPIT_04600 94e9b562c116636d46d7d21704011597 958 Gene3D G3DSA:3.40.50.10050 752 860 3.4E-33 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily RPIT_04600 94e9b562c116636d46d7d21704011597 958 Gene3D G3DSA:1.10.10.2480 1 63 2.5E-11 T 13-10-2018 RPIT_04600 94e9b562c116636d46d7d21704011597 958 SUPERFAMILY SSF50447 861 957 7.86E-31 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily RPIT_04600 94e9b562c116636d46d7d21704011597 958 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 365 957 7.7E-233 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 RPIT_04600 94e9b562c116636d46d7d21704011597 958 ProSitePatterns PS01176 Initiation factor 2 signature. 910 932 - T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 RPIT_04600 94e9b562c116636d46d7d21704011597 958 Pfam PF11987 Translation-initiation factor 2 744 849 5.4E-33 T 13-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 RPIT_04600 94e9b562c116636d46d7d21704011597 958 PRINTS PR00315 GTP-binding elongation factor signature 508 518 8.2E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_04600 94e9b562c116636d46d7d21704011597 958 PRINTS PR00315 GTP-binding elongation factor signature 524 535 8.2E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_04600 94e9b562c116636d46d7d21704011597 958 PRINTS PR00315 GTP-binding elongation factor signature 560 569 8.2E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_04600 94e9b562c116636d46d7d21704011597 958 PRINTS PR00315 GTP-binding elongation factor signature 456 469 8.2E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_02670 f23ac99c6a890fc491606f12b92cced9 185 Pfam PF12838 4Fe-4S dicluster domain 55 115 6.5E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIT_02670 f23ac99c6a890fc491606f12b92cced9 185 Gene3D G3DSA:3.30.70.3270 26 174 2.1E-44 T 13-10-2018 RPIT_02670 f23ac99c6a890fc491606f12b92cced9 185 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 2 149 26.32 T 13-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02670 f23ac99c6a890fc491606f12b92cced9 185 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIT_02670 f23ac99c6a890fc491606f12b92cced9 185 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 101 112 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIT_02670 f23ac99c6a890fc491606f12b92cced9 185 SUPERFAMILY SSF54862 37 144 7.53E-25 T 13-10-2018 RPIT_02670 f23ac99c6a890fc491606f12b92cced9 185 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 9 139 2.5E-39 T 13-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_08670 1bb6d8a34f01adfa899d41c621840cdd 1176 Gene3D G3DSA:3.40.50.300 1 281 9.1E-56 T 13-10-2018 RPIT_08670 1bb6d8a34f01adfa899d41c621840cdd 1176 SUPERFAMILY SSF52540 1 1166 2.0E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_08670 1bb6d8a34f01adfa899d41c621840cdd 1176 Gene3D G3DSA:3.40.50.300 1020 1176 1.9E-41 T 13-10-2018 RPIT_08670 1bb6d8a34f01adfa899d41c621840cdd 1176 SUPERFAMILY SSF75553 465 660 4.71E-18 T 13-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 RPIT_08670 1bb6d8a34f01adfa899d41c621840cdd 1176 Gene3D G3DSA:3.30.70.1620 568 643 7.2E-9 T 13-10-2018 RPIT_08670 1bb6d8a34f01adfa899d41c621840cdd 1176 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1175 21.917 T 13-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 RPIT_08670 1bb6d8a34f01adfa899d41c621840cdd 1176 Gene3D G3DSA:1.20.1060.20 510 649 7.2E-9 T 13-10-2018 RPIT_08670 1bb6d8a34f01adfa899d41c621840cdd 1176 Pfam PF06470 SMC proteins Flexible Hinge Domain 510 613 3.2E-13 T 13-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RPIT_08670 1bb6d8a34f01adfa899d41c621840cdd 1176 SMART SM00968 508 616 1.2E-10 T 13-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RPIT_08670 1bb6d8a34f01adfa899d41c621840cdd 1176 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1166 1.7E-67 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal RPIT_08670 1bb6d8a34f01adfa899d41c621840cdd 1176 PIRSF PIRSF005719 1 1176 2.0E-239 T 13-10-2018 IPR024704 Structural maintenance of chromosomes protein RPIT_08670 1bb6d8a34f01adfa899d41c621840cdd 1176 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1173 9.2E-269 T 13-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 RPIT_00845 803670870d3f5b21cd34a969bf8803ed 301 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 132 144 - T 13-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RPIT_00845 803670870d3f5b21cd34a969bf8803ed 301 Gene3D G3DSA:1.10.510.10 96 268 9.3E-48 T 13-10-2018 RPIT_00845 803670870d3f5b21cd34a969bf8803ed 301 SMART SM00220 14 265 1.0E-61 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RPIT_00845 803670870d3f5b21cd34a969bf8803ed 301 SUPERFAMILY SSF56112 11 262 1.43E-72 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily RPIT_00845 803670870d3f5b21cd34a969bf8803ed 301 Pfam PF00069 Protein kinase domain 16 260 1.4E-49 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RPIT_00845 803670870d3f5b21cd34a969bf8803ed 301 PIRSF PIRSF000654 36 265 1.7E-26 T 13-10-2018 RPIT_00845 803670870d3f5b21cd34a969bf8803ed 301 Gene3D G3DSA:3.30.200.20 1 95 2.5E-29 T 13-10-2018 RPIT_12970 f06c75cc0d679cd8edfac84445cb9fd3 123 Pfam PF12840 Helix-turn-helix domain 34 94 1.6E-14 T 13-10-2018 RPIT_12970 f06c75cc0d679cd8edfac84445cb9fd3 123 SMART SM00418 33 113 6.0E-23 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_12970 f06c75cc0d679cd8edfac84445cb9fd3 123 SUPERFAMILY SSF46785 26 112 2.06E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_12970 f06c75cc0d679cd8edfac84445cb9fd3 123 Gene3D G3DSA:1.10.10.10 19 114 1.0E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_12970 f06c75cc0d679cd8edfac84445cb9fd3 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 70 85 1.3E-16 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_12970 f06c75cc0d679cd8edfac84445cb9fd3 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 85 100 1.3E-16 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_12970 f06c75cc0d679cd8edfac84445cb9fd3 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 68 1.3E-16 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_12970 f06c75cc0d679cd8edfac84445cb9fd3 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 35 50 1.3E-16 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_14520 b2a9bbaa473c4fca9be98f9668b975f2 349 Gene3D G3DSA:3.20.20.140 5 347 8.7E-81 T 13-10-2018 RPIT_14520 b2a9bbaa473c4fca9be98f9668b975f2 349 SUPERFAMILY SSF51556 12 344 2.77E-61 T 13-10-2018 IPR032466 Metal-dependent hydrolase RPIT_14520 b2a9bbaa473c4fca9be98f9668b975f2 349 Pfam PF00962 Adenosine/AMP deaminase 14 336 5.1E-65 T 13-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 RPIT_14520 b2a9bbaa473c4fca9be98f9668b975f2 349 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 14 338 2.0E-83 T 13-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 RPIT_14520 b2a9bbaa473c4fca9be98f9668b975f2 349 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 283 289 - T 13-10-2018 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: R-HSA-74217 RPIT_11405 992b0a7edd5ced8d4108c0823d5ec253 334 SUPERFAMILY SSF53822 64 330 1.88E-61 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_11405 992b0a7edd5ced8d4108c0823d5ec253 334 Gene3D G3DSA:3.40.50.2300 160 289 1.1E-64 T 13-10-2018 RPIT_11405 992b0a7edd5ced8d4108c0823d5ec253 334 SUPERFAMILY SSF47413 2 61 1.13E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_11405 992b0a7edd5ced8d4108c0823d5ec253 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 13-10-2018 RPIT_11405 992b0a7edd5ced8d4108c0823d5ec253 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 1.4E-15 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_11405 992b0a7edd5ced8d4108c0823d5ec253 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 1.4E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_11405 992b0a7edd5ced8d4108c0823d5ec253 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 1.4E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_11405 992b0a7edd5ced8d4108c0823d5ec253 334 SMART SM00354 3 73 5.1E-23 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_11405 992b0a7edd5ced8d4108c0823d5ec253 334 Gene3D G3DSA:1.10.260.40 1 57 3.1E-21 T 13-10-2018 RPIT_11405 992b0a7edd5ced8d4108c0823d5ec253 334 Pfam PF13377 Periplasmic binding protein-like domain 168 329 2.9E-41 T 13-10-2018 RPIT_11405 992b0a7edd5ced8d4108c0823d5ec253 334 Gene3D G3DSA:3.40.50.2300 58 306 1.1E-64 T 13-10-2018 RPIT_14480 fdf214733db8a8cd8ee094015c66c4ca 595 PRINTS PR00154 AMP-binding signature 170 181 3.6E-5 T 13-10-2018 IPR020459 AMP-binding RPIT_14480 fdf214733db8a8cd8ee094015c66c4ca 595 PRINTS PR00154 AMP-binding signature 182 190 3.6E-5 T 13-10-2018 IPR020459 AMP-binding RPIT_14480 fdf214733db8a8cd8ee094015c66c4ca 595 Gene3D G3DSA:3.40.50.12780 2 290 1.2E-56 T 13-10-2018 RPIT_14480 fdf214733db8a8cd8ee094015c66c4ca 595 SUPERFAMILY SSF56801 9 586 2.09E-118 T 13-10-2018 RPIT_14480 fdf214733db8a8cd8ee094015c66c4ca 595 ProSitePatterns PS00455 Putative AMP-binding domain signature. 175 186 - T 13-10-2018 IPR020845 AMP-binding, conserved site RPIT_14480 fdf214733db8a8cd8ee094015c66c4ca 595 Gene3D G3DSA:3.40.50.12780 314 449 9.3E-41 T 13-10-2018 RPIT_14480 fdf214733db8a8cd8ee094015c66c4ca 595 Pfam PF00501 AMP-binding enzyme 10 455 6.1E-98 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 RPIT_01380 15b4089c062ac4f0b8eafb582516f586 223 SMART SM00525 184 204 0.0014 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 RPIT_01380 15b4089c062ac4f0b8eafb582516f586 223 Pfam PF00633 Helix-hairpin-helix motif 98 124 2.4E-9 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 RPIT_01380 15b4089c062ac4f0b8eafb582516f586 223 Gene3D G3DSA:1.10.1670.10 14 201 4.6E-74 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 RPIT_01380 15b4089c062ac4f0b8eafb582516f586 223 SMART SM00478 36 183 3.9E-60 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RPIT_01380 15b4089c062ac4f0b8eafb582516f586 223 SUPERFAMILY SSF48150 3 204 1.57E-69 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RPIT_01380 15b4089c062ac4f0b8eafb582516f586 223 PIRSF PIRSF001435 3 210 4.0E-48 T 13-10-2018 RPIT_01380 15b4089c062ac4f0b8eafb582516f586 223 Gene3D G3DSA:1.10.340.30 19 130 4.6E-74 T 13-10-2018 RPIT_01380 15b4089c062ac4f0b8eafb582516f586 223 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 185 201 - T 13-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RPIT_01380 15b4089c062ac4f0b8eafb582516f586 223 ProSitePatterns PS01155 Endonuclease III family signature. 100 129 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 RPIT_01380 15b4089c062ac4f0b8eafb582516f586 223 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 185 201 4.3E-6 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 RPIT_01380 15b4089c062ac4f0b8eafb582516f586 223 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 32 167 2.7E-20 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RPIT_01380 15b4089c062ac4f0b8eafb582516f586 223 Hamap MF_00942 Endonuclease III [nth]. 1 207 37.384 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 RPIT_01380 15b4089c062ac4f0b8eafb582516f586 223 TIGRFAM TIGR01083 nth: endonuclease III 4 192 1.1E-74 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 RPIT_04175 b8a2729574ff53c6f630f466537ac9e9 639 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 13 602 5.3E-152 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 RPIT_04175 b8a2729574ff53c6f630f466537ac9e9 639 Pfam PF02151 UvrB/uvrC motif 211 242 3.3E-9 T 13-10-2018 IPR001943 UVR domain GO:0005515 RPIT_04175 b8a2729574ff53c6f630f466537ac9e9 639 SMART SM00465 17 99 4.2E-19 T 13-10-2018 IPR000305 GIY-YIG endonuclease RPIT_04175 b8a2729574ff53c6f630f466537ac9e9 639 Gene3D G3DSA:3.30.420.340 381 562 4.6E-53 T 13-10-2018 IPR038476 UvrC homology region 2 superfamily RPIT_04175 b8a2729574ff53c6f630f466537ac9e9 639 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 389 555 6.0E-50 T 13-10-2018 IPR001162 UvrC family homology region RPIT_04175 b8a2729574ff53c6f630f466537ac9e9 639 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 620 28.822 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 RPIT_04175 b8a2729574ff53c6f630f466537ac9e9 639 SUPERFAMILY SSF46600 195 246 2.62E-11 T 13-10-2018 IPR036876 UVR domain superfamily RPIT_04175 b8a2729574ff53c6f630f466537ac9e9 639 SUPERFAMILY SSF47781 526 623 7.31E-24 T 13-10-2018 IPR010994 RuvA domain 2-like RPIT_04175 b8a2729574ff53c6f630f466537ac9e9 639 SUPERFAMILY SSF82771 18 101 8.11E-23 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 RPIT_04175 b8a2729574ff53c6f630f466537ac9e9 639 Pfam PF01541 GIY-YIG catalytic domain 19 92 3.4E-12 T 13-10-2018 IPR000305 GIY-YIG endonuclease RPIT_04175 b8a2729574ff53c6f630f466537ac9e9 639 Gene3D G3DSA:3.40.1440.10 5 103 3.1E-28 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 RPIT_04175 b8a2729574ff53c6f630f466537ac9e9 639 Gene3D G3DSA:1.10.150.20 563 621 2.9E-20 T 13-10-2018 RPIT_04175 b8a2729574ff53c6f630f466537ac9e9 639 Pfam PF12826 Helix-hairpin-helix motif 577 620 1.7E-7 T 13-10-2018 RPIT_10800 701b23462d713b327730e363cb142dae 158 SUPERFAMILY SSF54427 5 139 2.04E-33 T 13-10-2018 IPR032710 NTF2-like domain superfamily RPIT_10800 701b23462d713b327730e363cb142dae 158 Gene3D G3DSA:3.10.450.50 7 140 2.3E-41 T 13-10-2018 RPIT_10800 701b23462d713b327730e363cb142dae 158 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 13 128 9.5E-21 T 13-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 RPIT_10800 701b23462d713b327730e363cb142dae 158 Pfam PF14534 Domain of unknown function (DUF4440) 10 120 2.8E-15 T 13-10-2018 IPR027843 Domain of unknown function DUF4440 RPIT_05250 1015e9718f6afafb0bb2e041893bd617 929 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 159 320 5.9E-9 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RPIT_05250 1015e9718f6afafb0bb2e041893bd617 929 Gene3D G3DSA:3.40.50.970 502 736 5.4E-104 T 13-10-2018 RPIT_05250 1015e9718f6afafb0bb2e041893bd617 929 SUPERFAMILY SSF52922 735 916 1.74E-50 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 RPIT_05250 1015e9718f6afafb0bb2e041893bd617 929 Gene3D G3DSA:3.40.50.920 738 921 8.8E-61 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 RPIT_05250 1015e9718f6afafb0bb2e041893bd617 929 SUPERFAMILY SSF52518 502 731 2.0E-88 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_05250 1015e9718f6afafb0bb2e041893bd617 929 PIRSF PIRSF000156 19 923 0.0 T 13-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RPIT_05250 1015e9718f6afafb0bb2e041893bd617 929 SUPERFAMILY SSF52518 78 498 1.04E-126 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_05250 1015e9718f6afafb0bb2e041893bd617 929 Gene3D G3DSA:3.40.50.970 77 501 7.7E-127 T 13-10-2018 RPIT_05250 1015e9718f6afafb0bb2e041893bd617 929 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 28 919 0.0 T 13-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RPIT_04330 7dd9837e257ecd53ebc7122456d15442 233 SUPERFAMILY SSF52540 4 220 4.93E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04330 7dd9837e257ecd53ebc7122456d15442 233 Pfam PF00005 ABC transporter 20 157 1.1E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_04330 7dd9837e257ecd53ebc7122456d15442 233 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_04330 7dd9837e257ecd53ebc7122456d15442 233 Gene3D G3DSA:3.40.50.300 1 228 2.6E-54 T 13-10-2018 RPIT_04330 7dd9837e257ecd53ebc7122456d15442 233 SMART SM00382 29 205 1.9E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_10075 1f81ddae346b1fc8af0ac04bdbd595da 465 SUPERFAMILY SSF53613 210 457 1.69E-45 T 13-10-2018 IPR029056 Ribokinase-like RPIT_10075 1f81ddae346b1fc8af0ac04bdbd595da 465 PIRSF PIRSF017184 2 462 7.2E-94 T 13-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 RPIT_10075 1f81ddae346b1fc8af0ac04bdbd595da 465 SUPERFAMILY SSF64153 4 230 1.29E-43 T 13-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 RPIT_10075 1f81ddae346b1fc8af0ac04bdbd595da 465 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 5 199 18.397 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RPIT_10075 1f81ddae346b1fc8af0ac04bdbd595da 465 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 209 460 15.648 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 RPIT_10075 1f81ddae346b1fc8af0ac04bdbd595da 465 Gene3D G3DSA:3.40.1190.20 203 458 3.0E-63 T 13-10-2018 IPR029056 Ribokinase-like RPIT_10075 1f81ddae346b1fc8af0ac04bdbd595da 465 Pfam PF01256 Carbohydrate kinase 233 437 1.5E-35 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 RPIT_10075 1f81ddae346b1fc8af0ac04bdbd595da 465 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 4 198 1.8E-31 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RPIT_10075 1f81ddae346b1fc8af0ac04bdbd595da 465 Gene3D G3DSA:3.40.50.10260 3 202 1.0E-42 T 13-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 RPIT_10075 1f81ddae346b1fc8af0ac04bdbd595da 465 Pfam PF03853 YjeF-related protein N-terminus 24 178 3.1E-30 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RPIT_03155 c25c46821a931dc7120a983d841b9152 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 13-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03155 c25c46821a931dc7120a983d841b9152 61 Pfam PF00253 Ribosomal protein S14p/S29e 10 60 9.6E-25 T 13-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03155 c25c46821a931dc7120a983d841b9152 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.642 T 13-10-2018 IPR023053 Ribosomal protein S14, type Z RPIT_03155 c25c46821a931dc7120a983d841b9152 61 Gene3D G3DSA:4.10.830.10 1 61 3.3E-31 T 13-10-2018 RPIT_03155 c25c46821a931dc7120a983d841b9152 61 SUPERFAMILY SSF57716 3 61 2.0E-22 T 13-10-2018 RPIT_08280 268b184a581b6265b55d4a61fa992145 228 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 85 167 9.1E-33 T 13-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 RPIT_08280 268b184a581b6265b55d4a61fa992145 228 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 7 75 3.4E-28 T 13-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RPIT_08280 268b184a581b6265b55d4a61fa992145 228 Gene3D G3DSA:3.10.20.80 1 75 8.9E-30 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RPIT_08280 268b184a581b6265b55d4a61fa992145 228 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 170 28.427 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RPIT_08280 268b184a581b6265b55d4a61fa992145 228 SUPERFAMILY SSF54364 5 78 9.42E-27 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RPIT_08280 268b184a581b6265b55d4a61fa992145 228 ProSitePatterns PS00938 Initiation factor 3 signature. 58 71 - T 13-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 RPIT_08280 268b184a581b6265b55d4a61fa992145 228 Gene3D G3DSA:3.30.110.10 76 171 3.3E-33 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 RPIT_08280 268b184a581b6265b55d4a61fa992145 228 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 7 170 1.2E-57 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RPIT_08280 268b184a581b6265b55d4a61fa992145 228 SUPERFAMILY SSF55200 85 169 1.28E-30 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 RPIT_13720 df1c54e0f3039c0eb794b1a82a11f88f 247 Gene3D G3DSA:3.30.1600.10 27 168 1.2E-66 T 13-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily RPIT_13720 df1c54e0f3039c0eb794b1a82a11f88f 247 Pfam PF02146 Sir2 family 18 198 4.4E-40 T 13-10-2018 IPR003000 Sirtuin family GO:0070403 RPIT_13720 df1c54e0f3039c0eb794b1a82a11f88f 247 Gene3D G3DSA:3.40.50.1220 9 241 1.2E-66 T 13-10-2018 RPIT_13720 df1c54e0f3039c0eb794b1a82a11f88f 247 SUPERFAMILY SSF52467 7 244 2.37E-68 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily RPIT_08465 d3dd187c285a6afb6b3783c3e936e5fc 147 Pfam PF03713 Domain of unknown function (DUF305) 93 143 6.9E-11 T 13-10-2018 IPR005183 Domain of unknown function DUF305 RPIT_08465 d3dd187c285a6afb6b3783c3e936e5fc 147 Gene3D G3DSA:1.20.1260.10 84 147 3.0E-11 T 13-10-2018 IPR012347 Ferritin-like RPIT_03655 aeb6641039e009153eac7564c37bcb53 260 PIRSF PIRSF003073 11 256 1.3E-61 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein RPIT_03655 aeb6641039e009153eac7564c37bcb53 260 SUPERFAMILY SSF52540 100 250 1.62E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_03655 aeb6641039e009153eac7564c37bcb53 260 Pfam PF01695 IstB-like ATP binding protein 67 238 1.2E-51 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 RPIT_03655 aeb6641039e009153eac7564c37bcb53 260 SMART SM00382 107 239 2.7E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_03655 aeb6641039e009153eac7564c37bcb53 260 Gene3D G3DSA:3.40.50.300 74 253 1.1E-33 T 13-10-2018 RPIT_04505 7c93fad4e17d1ba6f2c00e740e285e38 249 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 12 243 7.1E-88 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 RPIT_04505 7c93fad4e17d1ba6f2c00e740e285e38 249 Gene3D G3DSA:3.40.1160.10 4 247 2.3E-70 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily RPIT_04505 7c93fad4e17d1ba6f2c00e740e285e38 249 Pfam PF00696 Amino acid kinase family 14 222 2.5E-21 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 RPIT_04505 7c93fad4e17d1ba6f2c00e740e285e38 249 SUPERFAMILY SSF53633 11 243 3.67E-63 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily RPIT_04505 7c93fad4e17d1ba6f2c00e740e285e38 249 PIRSF PIRSF005650 7 249 6.5E-85 T 13-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 RPIT_04505 7c93fad4e17d1ba6f2c00e740e285e38 249 Hamap MF_01220_B Uridylate kinase [pyrH]. 10 243 41.284 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 RPIT_00340 962962a250654b1371e368e0ba5781c2 330 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 5 330 79.372 T 13-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RPIT_00340 962962a250654b1371e368e0ba5781c2 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 294 317 7.1E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIT_00340 962962a250654b1371e368e0ba5781c2 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 133 144 7.1E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIT_00340 962962a250654b1371e368e0ba5781c2 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 274 7.1E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIT_00340 962962a250654b1371e368e0ba5781c2 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 51 70 7.1E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIT_00340 962962a250654b1371e368e0ba5781c2 330 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 6 329 2.1E-121 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 RPIT_00340 962962a250654b1371e368e0ba5781c2 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 227 237 9.2E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 RPIT_00340 962962a250654b1371e368e0ba5781c2 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 122 136 9.2E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 RPIT_00340 962962a250654b1371e368e0ba5781c2 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 82 95 9.2E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 RPIT_00340 962962a250654b1371e368e0ba5781c2 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 49 63 9.2E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 RPIT_00340 962962a250654b1371e368e0ba5781c2 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 308 319 9.2E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 RPIT_00340 962962a250654b1371e368e0ba5781c2 330 Gene3D G3DSA:3.40.50.1370 149 316 6.2E-130 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 RPIT_00340 962962a250654b1371e368e0ba5781c2 330 Gene3D G3DSA:3.40.50.1370 3 326 6.2E-130 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 RPIT_00340 962962a250654b1371e368e0ba5781c2 330 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 327 6.4E-54 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RPIT_00340 962962a250654b1371e368e0ba5781c2 330 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 6 146 1.7E-43 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RPIT_00340 962962a250654b1371e368e0ba5781c2 330 SUPERFAMILY SSF53671 2 329 4.98E-95 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 RPIT_00340 962962a250654b1371e368e0ba5781c2 330 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 51 58 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIT_09865 f12db110b7062ed1bf68e2c931e7f489 307 PIRSF PIRSF001553 1 293 2.7E-114 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RPIT_09865 f12db110b7062ed1bf68e2c931e7f489 307 PRINTS PR01798 Succinyl-CoA synthase signature 86 103 1.5E-33 T 13-10-2018 RPIT_09865 f12db110b7062ed1bf68e2c931e7f489 307 PRINTS PR01798 Succinyl-CoA synthase signature 242 259 1.5E-33 T 13-10-2018 RPIT_09865 f12db110b7062ed1bf68e2c931e7f489 307 PRINTS PR01798 Succinyl-CoA synthase signature 210 223 1.5E-33 T 13-10-2018 RPIT_09865 f12db110b7062ed1bf68e2c931e7f489 307 PRINTS PR01798 Succinyl-CoA synthase signature 179 197 1.5E-33 T 13-10-2018 RPIT_09865 f12db110b7062ed1bf68e2c931e7f489 307 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 238 251 - T 13-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RPIT_09865 f12db110b7062ed1bf68e2c931e7f489 307 SUPERFAMILY SSF51735 1 126 9.01E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_09865 f12db110b7062ed1bf68e2c931e7f489 307 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 290 38.345 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RPIT_09865 f12db110b7062ed1bf68e2c931e7f489 307 Pfam PF02629 CoA binding domain 8 103 5.6E-20 T 13-10-2018 IPR003781 CoA-binding GO:0048037 RPIT_09865 f12db110b7062ed1bf68e2c931e7f489 307 Gene3D G3DSA:3.40.50.720 1 127 1.1E-45 T 13-10-2018 RPIT_09865 f12db110b7062ed1bf68e2c931e7f489 307 SUPERFAMILY SSF52210 127 282 5.49E-46 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RPIT_09865 f12db110b7062ed1bf68e2c931e7f489 307 SMART SM00881 4 104 4.8E-26 T 13-10-2018 IPR003781 CoA-binding GO:0048037 RPIT_09865 f12db110b7062ed1bf68e2c931e7f489 307 Pfam PF00549 CoA-ligase 155 273 3.5E-14 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RPIT_09865 f12db110b7062ed1bf68e2c931e7f489 307 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 1.6E-123 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RPIT_09865 f12db110b7062ed1bf68e2c931e7f489 307 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 156 183 - T 13-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site RPIT_09865 f12db110b7062ed1bf68e2c931e7f489 307 Gene3D G3DSA:3.40.50.261 128 289 4.7E-60 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RPIT_10105 3eb9e82511f87c46eb90e3a0461acf59 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 205 219 1.4E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_10105 3eb9e82511f87c46eb90e3a0461acf59 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 1.4E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_10105 3eb9e82511f87c46eb90e3a0461acf59 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 1.4E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_10105 3eb9e82511f87c46eb90e3a0461acf59 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 42 57 1.4E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_10105 3eb9e82511f87c46eb90e3a0461acf59 273 SUPERFAMILY SSF53474 2 259 3.95E-39 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_10105 3eb9e82511f87c46eb90e3a0461acf59 273 Gene3D G3DSA:3.40.50.1820 1 260 2.0E-47 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_10105 3eb9e82511f87c46eb90e3a0461acf59 273 Pfam PF12146 Serine aminopeptidase, S33 43 243 5.7E-13 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 RPIT_02340 ddc4746ae22ba65fc212edcf2f05ef4c 154 Gene3D G3DSA:3.30.70.640 1 154 2.4E-54 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RPIT_02340 ddc4746ae22ba65fc212edcf2f05ef4c 154 SUPERFAMILY SSF55040 10 152 2.35E-47 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RPIT_02340 ddc4746ae22ba65fc212edcf2f05ef4c 154 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 3 149 3.4E-52 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RPIT_02340 ddc4746ae22ba65fc212edcf2f05ef4c 154 Pfam PF01967 MoaC family 14 147 1.8E-43 T 13-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RPIT_08425 b66b99cca72b386b8874c7120ecec761 494 Pfam PF00394 Multicopper oxidase 183 344 6.6E-21 T 13-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 RPIT_08425 b66b99cca72b386b8874c7120ecec761 494 Gene3D G3DSA:2.60.40.420 47 173 3.7E-29 T 13-10-2018 IPR008972 Cupredoxin RPIT_08425 b66b99cca72b386b8874c7120ecec761 494 ProSitePatterns PS00079 Multicopper oxidases signature 1. 471 491 - T 13-10-2018 IPR033138 Multicopper oxidases, conserved site RPIT_08425 b66b99cca72b386b8874c7120ecec761 494 Pfam PF07732 Multicopper oxidase 88 174 7.5E-24 T 13-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 RPIT_08425 b66b99cca72b386b8874c7120ecec761 494 SUPERFAMILY SSF49503 176 353 1.81E-31 T 13-10-2018 IPR008972 Cupredoxin RPIT_08425 b66b99cca72b386b8874c7120ecec761 494 SUPERFAMILY SSF49503 366 491 1.06E-31 T 13-10-2018 IPR008972 Cupredoxin RPIT_08425 b66b99cca72b386b8874c7120ecec761 494 ProSitePatterns PS00080 Multicopper oxidases signature 2. 476 487 - T 13-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 RPIT_08425 b66b99cca72b386b8874c7120ecec761 494 SUPERFAMILY SSF49503 62 201 5.43E-29 T 13-10-2018 IPR008972 Cupredoxin RPIT_08425 b66b99cca72b386b8874c7120ecec761 494 Gene3D G3DSA:2.60.40.420 372 493 9.8E-30 T 13-10-2018 IPR008972 Cupredoxin RPIT_08425 b66b99cca72b386b8874c7120ecec761 494 Pfam PF07731 Multicopper oxidase 390 491 2.7E-22 T 13-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 RPIT_08425 b66b99cca72b386b8874c7120ecec761 494 Gene3D G3DSA:2.60.40.420 178 362 1.7E-30 T 13-10-2018 IPR008972 Cupredoxin RPIT_03910 0bed4f47b30e5ba86ee52a4bce858b4f 603 Pfam PF00664 ABC transporter transmembrane region 38 311 2.5E-39 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 RPIT_03910 0bed4f47b30e5ba86ee52a4bce858b4f 603 ProSitePatterns PS00211 ABC transporters family signature. 494 508 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_03910 0bed4f47b30e5ba86ee52a4bce858b4f 603 Gene3D G3DSA:1.20.1560.10 18 339 1.5E-74 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_03910 0bed4f47b30e5ba86ee52a4bce858b4f 603 SUPERFAMILY SSF52540 349 590 3.18E-78 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_03910 0bed4f47b30e5ba86ee52a4bce858b4f 603 SMART SM00382 382 568 6.3E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_03910 0bed4f47b30e5ba86ee52a4bce858b4f 603 SUPERFAMILY SSF90123 23 341 1.26E-65 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_03910 0bed4f47b30e5ba86ee52a4bce858b4f 603 Gene3D G3DSA:3.40.50.300 353 600 5.0E-84 T 13-10-2018 RPIT_03910 0bed4f47b30e5ba86ee52a4bce858b4f 603 Pfam PF00005 ABC transporter 373 521 2.2E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_00585 fa4c1ace16dab4c43bd91db9ed67f7ce 362 Gene3D G3DSA:3.40.640.10 1 242 5.6E-94 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_00585 fa4c1ace16dab4c43bd91db9ed67f7ce 362 Gene3D G3DSA:3.90.1150.10 244 360 3.1E-26 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_00585 fa4c1ace16dab4c43bd91db9ed67f7ce 362 SUPERFAMILY SSF53383 6 357 6.19E-106 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_00585 fa4c1ace16dab4c43bd91db9ed67f7ce 362 PIRSF PIRSF000390 1 362 1.4E-104 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RPIT_00585 fa4c1ace16dab4c43bd91db9ed67f7ce 362 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 354 1.7E-120 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RPIT_11340 bfb43cfb1c5a607265c0271d3bde0075 582 Gene3D G3DSA:3.20.20.80 100 465 1.8E-105 T 13-10-2018 RPIT_11340 bfb43cfb1c5a607265c0271d3bde0075 582 SUPERFAMILY SSF51445 89 466 1.38E-96 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_11340 bfb43cfb1c5a607265c0271d3bde0075 582 SUPERFAMILY SSF81296 1 98 5.25E-24 T 13-10-2018 IPR014756 Immunoglobulin E-set RPIT_11340 bfb43cfb1c5a607265c0271d3bde0075 582 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 1 77 3.0E-19 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RPIT_11340 bfb43cfb1c5a607265c0271d3bde0075 582 PIRSF PIRSF000463 2 582 2.4E-94 T 13-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RPIT_11340 bfb43cfb1c5a607265c0271d3bde0075 582 SMART SM00642 114 464 2.5E-9 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_11340 bfb43cfb1c5a607265c0271d3bde0075 582 Gene3D G3DSA:2.60.40.1180 479 579 3.5E-14 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta RPIT_11340 bfb43cfb1c5a607265c0271d3bde0075 582 Gene3D G3DSA:2.60.40.10 1 89 5.3E-25 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_11340 bfb43cfb1c5a607265c0271d3bde0075 582 SUPERFAMILY SSF51011 481 579 5.25E-14 T 13-10-2018 RPIT_11340 bfb43cfb1c5a607265c0271d3bde0075 582 Pfam PF00128 Alpha amylase, catalytic domain 245 430 4.6E-10 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_11340 bfb43cfb1c5a607265c0271d3bde0075 582 Pfam PF00128 Alpha amylase, catalytic domain 134 228 4.2E-13 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_11340 bfb43cfb1c5a607265c0271d3bde0075 582 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 484 579 1.7E-9 T 13-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 RPIT_05445 492a52319d607a48f2e67adaca2630d5 179 Pfam PF08281 Sigma-70, region 4 107 157 2.0E-17 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIT_05445 492a52319d607a48f2e67adaca2630d5 179 Gene3D G3DSA:1.10.10.10 87 164 1.8E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_05445 492a52319d607a48f2e67adaca2630d5 179 SUPERFAMILY SSF88946 12 87 1.57E-12 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_05445 492a52319d607a48f2e67adaca2630d5 179 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 10 163 1.1E-44 T 13-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 RPIT_05445 492a52319d607a48f2e67adaca2630d5 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 160 1.4E-21 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 RPIT_05445 492a52319d607a48f2e67adaca2630d5 179 Gene3D G3DSA:1.10.1740.10 3 86 7.2E-10 T 13-10-2018 RPIT_05445 492a52319d607a48f2e67adaca2630d5 179 Pfam PF04542 Sigma-70 region 2 25 85 1.1E-7 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_05445 492a52319d607a48f2e67adaca2630d5 179 SUPERFAMILY SSF88659 95 160 2.24E-15 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like RPIT_13290 953c746440ec3ed7415d652f5cb1accd 287 Pfam PF07702 UTRA domain 108 233 9.0E-26 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RPIT_13290 953c746440ec3ed7415d652f5cb1accd 287 SUPERFAMILY SSF64288 74 249 1.57E-34 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RPIT_13290 953c746440ec3ed7415d652f5cb1accd 287 Gene3D G3DSA:1.10.10.10 19 83 1.0E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_13290 953c746440ec3ed7415d652f5cb1accd 287 SUPERFAMILY SSF46785 16 90 6.06E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_13290 953c746440ec3ed7415d652f5cb1accd 287 SMART SM00345 27 86 1.2E-19 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_13290 953c746440ec3ed7415d652f5cb1accd 287 SMART SM00866 107 246 1.1E-24 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RPIT_13290 953c746440ec3ed7415d652f5cb1accd 287 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 86 1.6E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_13290 953c746440ec3ed7415d652f5cb1accd 287 Gene3D G3DSA:3.40.1410.10 84 235 1.2E-32 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RPIT_13290 953c746440ec3ed7415d652f5cb1accd 287 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 4.8E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_13290 953c746440ec3ed7415d652f5cb1accd 287 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 4.8E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_01685 2adb234de341a4d554a382123d8fbb2e 262 SUPERFAMILY SSF51735 1 155 5.98E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_01685 2adb234de341a4d554a382123d8fbb2e 262 SUPERFAMILY SSF48179 156 261 5.1E-32 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 RPIT_01685 2adb234de341a4d554a382123d8fbb2e 262 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 260 26.885 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 RPIT_01685 2adb234de341a4d554a382123d8fbb2e 262 Gene3D G3DSA:3.40.50.720 1 158 8.3E-46 T 13-10-2018 RPIT_01685 2adb234de341a4d554a382123d8fbb2e 262 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 215 238 - T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 RPIT_01685 2adb234de341a4d554a382123d8fbb2e 262 Gene3D G3DSA:1.10.3730.10 159 262 2.4E-37 T 13-10-2018 RPIT_01685 2adb234de341a4d554a382123d8fbb2e 262 PIRSF PIRSF000193 1 262 1.3E-73 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 RPIT_01685 2adb234de341a4d554a382123d8fbb2e 262 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 260 3.1E-78 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 RPIT_01685 2adb234de341a4d554a382123d8fbb2e 262 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 94 2.4E-19 T 13-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RPIT_01685 2adb234de341a4d554a382123d8fbb2e 262 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 157 260 6.3E-37 T 13-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 RPIT_10135 3c1a5b40dcf26b71dff1d4c34bcb4caf 383 Hamap MF_02040 Iron-sulfur cluster carrier protein. 105 368 33.682 T 13-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein RPIT_10135 3c1a5b40dcf26b71dff1d4c34bcb4caf 383 SUPERFAMILY SSF52540 114 371 7.1E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10135 3c1a5b40dcf26b71dff1d4c34bcb4caf 383 Gene3D G3DSA:3.30.300.130 7 98 4.4E-20 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily RPIT_10135 3c1a5b40dcf26b71dff1d4c34bcb4caf 383 ProSitePatterns PS01215 Mrp family signature. 221 237 - T 13-10-2018 IPR000808 Mrp, conserved site GO:0005524 RPIT_10135 3c1a5b40dcf26b71dff1d4c34bcb4caf 383 Pfam PF01883 Iron-sulfur cluster assembly protein 10 80 1.2E-16 T 13-10-2018 IPR002744 MIP18 family-like RPIT_10135 3c1a5b40dcf26b71dff1d4c34bcb4caf 383 Gene3D G3DSA:3.40.50.300 108 365 4.7E-69 T 13-10-2018 RPIT_10135 3c1a5b40dcf26b71dff1d4c34bcb4caf 383 SUPERFAMILY SSF117916 10 96 1.47E-21 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily RPIT_10135 3c1a5b40dcf26b71dff1d4c34bcb4caf 383 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 113 367 3.0E-86 T 13-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 RPIT_09515 95f90fef8a64978e8a460146bb45acb5 95 Gene3D G3DSA:3.30.1390.10 6 95 2.3E-16 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RPIT_09515 95f90fef8a64978e8a460146bb45acb5 95 SUPERFAMILY SSF54736 18 93 2.72E-23 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RPIT_09515 95f90fef8a64978e8a460146bb45acb5 95 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 21 85 4.9E-20 T 13-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 RPIT_09515 95f90fef8a64978e8a460146bb45acb5 95 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 14 95 15.127 T 13-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS RPIT_13580 a1cad1c5e47c8939fb29928c7de5c5e7 156 Gene3D G3DSA:3.30.300.20 13 92 2.4E-14 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta RPIT_13580 a1cad1c5e47c8939fb29928c7de5c5e7 156 Gene3D G3DSA:3.30.1370.50 93 156 1.6E-17 T 13-10-2018 IPR036867 R3H domain superfamily GO:0003676 RPIT_13580 a1cad1c5e47c8939fb29928c7de5c5e7 156 SUPERFAMILY SSF82708 109 155 3.92E-10 T 13-10-2018 IPR036867 R3H domain superfamily GO:0003676 RPIT_13580 a1cad1c5e47c8939fb29928c7de5c5e7 156 SMART SM00393 78 156 1.8E-20 T 13-10-2018 IPR001374 R3H domain GO:0003676 RPIT_13580 a1cad1c5e47c8939fb29928c7de5c5e7 156 Pfam PF01424 R3H domain 98 155 2.8E-14 T 13-10-2018 IPR001374 R3H domain GO:0003676 RPIT_03790 a34f02727b5288cdf548bd5fd6313799 224 SUPERFAMILY SSF52172 6 123 1.14E-29 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_03790 a34f02727b5288cdf548bd5fd6313799 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 2.7E-21 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_03790 a34f02727b5288cdf548bd5fd6313799 224 SMART SM00421 156 213 7.0E-25 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_03790 a34f02727b5288cdf548bd5fd6313799 224 SUPERFAMILY SSF46894 146 220 1.26E-22 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIT_03790 a34f02727b5288cdf548bd5fd6313799 224 Pfam PF00072 Response regulator receiver domain 10 120 7.7E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_03790 a34f02727b5288cdf548bd5fd6313799 224 ProSitePatterns PS00622 LuxR-type HTH domain signature. 173 200 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_03790 a34f02727b5288cdf548bd5fd6313799 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 4.8E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_03790 a34f02727b5288cdf548bd5fd6313799 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 4.8E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_03790 a34f02727b5288cdf548bd5fd6313799 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 4.8E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_03790 a34f02727b5288cdf548bd5fd6313799 224 SMART SM00448 8 120 2.0E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_03790 a34f02727b5288cdf548bd5fd6313799 224 Gene3D G3DSA:3.40.50.12740 8 219 2.5E-59 T 13-10-2018 RPIT_13935 5e15732e7209641edb7def7632f7ac24 149 SUPERFAMILY SSF51621 4 126 3.07E-14 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 RPIT_13935 5e15732e7209641edb7def7632f7ac24 149 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 8 108 1.5E-7 T 13-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 RPIT_13935 5e15732e7209641edb7def7632f7ac24 149 Gene3D G3DSA:3.20.20.60 1 113 3.2E-18 T 13-10-2018 RPIT_03185 73e9cdac6db307111c385831388168db 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 143 1.7E-43 T 13-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03185 73e9cdac6db307111c385831388168db 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 13-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03185 73e9cdac6db307111c385831388168db 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 146 19.264 T 13-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 RPIT_03185 73e9cdac6db307111c385831388168db 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 1.2E-31 T 13-10-2018 IPR021131 Ribosomal protein L18e/L15P RPIT_03185 73e9cdac6db307111c385831388168db 146 SUPERFAMILY SSF52080 6 145 9.03E-39 T 13-10-2018 IPR036227 Ribosomal L18e/L15P superfamily RPIT_03185 73e9cdac6db307111c385831388168db 146 Gene3D G3DSA:3.100.10.10 67 146 6.9E-20 T 13-10-2018 RPIT_05685 cab1558a3239069b85e545c86a3b98b3 94 Gene3D G3DSA:3.40.630.30 5 93 1.9E-28 T 13-10-2018 RPIT_05685 cab1558a3239069b85e545c86a3b98b3 94 SUPERFAMILY SSF55729 7 93 1.74E-26 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_05685 cab1558a3239069b85e545c86a3b98b3 94 Pfam PF14542 GCN5-related N-acetyl-transferase 15 92 9.3E-26 T 13-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase RPIT_14780 08fda322f30b6bb31d0b6f3b92066142 532 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site RPIT_14780 08fda322f30b6bb31d0b6f3b92066142 532 Gene3D G3DSA:3.40.50.300 24 275 5.1E-89 T 13-10-2018 RPIT_14780 08fda322f30b6bb31d0b6f3b92066142 532 Pfam PF00009 Elongation factor Tu GTP binding domain 15 278 2.3E-48 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_14780 08fda322f30b6bb31d0b6f3b92066142 532 SUPERFAMILY SSF50447 262 393 4.8E-23 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily RPIT_14780 08fda322f30b6bb31d0b6f3b92066142 532 Gene3D G3DSA:3.40.50.300 17 379 5.1E-89 T 13-10-2018 RPIT_14780 08fda322f30b6bb31d0b6f3b92066142 532 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 511 1.2E-36 T 13-10-2018 IPR032090 Peptide chain release factor 3, C-terminal RPIT_14780 08fda322f30b6bb31d0b6f3b92066142 532 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 11 524 2.3E-152 T 13-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 RPIT_14780 08fda322f30b6bb31d0b6f3b92066142 532 SUPERFAMILY SSF54980 393 467 5.04E-12 T 13-10-2018 IPR035647 EF-G domain III/V-like RPIT_14780 08fda322f30b6bb31d0b6f3b92066142 532 PRINTS PR00315 GTP-binding elongation factor signature 18 31 7.8E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_14780 08fda322f30b6bb31d0b6f3b92066142 532 PRINTS PR00315 GTP-binding elongation factor signature 104 115 7.8E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_14780 08fda322f30b6bb31d0b6f3b92066142 532 PRINTS PR00315 GTP-binding elongation factor signature 140 149 7.8E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_14780 08fda322f30b6bb31d0b6f3b92066142 532 PRINTS PR00315 GTP-binding elongation factor signature 88 98 7.8E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_14780 08fda322f30b6bb31d0b6f3b92066142 532 PRINTS PR00315 GTP-binding elongation factor signature 68 76 7.8E-11 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_14780 08fda322f30b6bb31d0b6f3b92066142 532 SUPERFAMILY SSF52540 13 278 1.42E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_14780 08fda322f30b6bb31d0b6f3b92066142 532 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 7 526 46.077 T 13-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 RPIT_14780 08fda322f30b6bb31d0b6f3b92066142 532 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 20 151 1.4E-23 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RPIT_14780 08fda322f30b6bb31d0b6f3b92066142 532 Gene3D G3DSA:3.30.70.3280 390 527 1.5E-36 T 13-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily RPIT_10210 be9ad3c83f7f602ad60d38f98429e6d0 300 SMART SM00450 126 228 7.2E-13 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_10210 be9ad3c83f7f602ad60d38f98429e6d0 300 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 266 32.763 T 13-10-2018 IPR020936 Uncharacterised protein family UPF0176 RPIT_10210 be9ad3c83f7f602ad60d38f98429e6d0 300 Gene3D G3DSA:3.30.70.100 1 103 2.3E-17 T 13-10-2018 RPIT_10210 be9ad3c83f7f602ad60d38f98429e6d0 300 Pfam PF12368 Rhodanase C-terminal 233 290 4.7E-11 T 13-10-2018 IPR022111 Rhodanase, C-terminal RPIT_10210 be9ad3c83f7f602ad60d38f98429e6d0 300 Gene3D G3DSA:3.40.250.10 119 251 1.7E-31 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_10210 be9ad3c83f7f602ad60d38f98429e6d0 300 SUPERFAMILY SSF52821 122 225 7.2E-21 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_10210 be9ad3c83f7f602ad60d38f98429e6d0 300 Pfam PF00581 Rhodanese-like domain 127 223 9.2E-5 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_08215 5777589c62b9c4fbcccf2583c8782abc 387 Gene3D G3DSA:3.10.20.340 263 387 3.6E-39 T 13-10-2018 RPIT_08215 5777589c62b9c4fbcccf2583c8782abc 387 Pfam PF01960 ArgJ family 15 387 1.0E-128 T 13-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 RPIT_08215 5777589c62b9c4fbcccf2583c8782abc 387 Gene3D G3DSA:3.60.70.12 3 262 3.6E-89 T 13-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 RPIT_08215 5777589c62b9c4fbcccf2583c8782abc 387 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 6 387 9.5E-109 T 13-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 RPIT_08215 5777589c62b9c4fbcccf2583c8782abc 387 SUPERFAMILY SSF56266 10 384 1.23E-128 T 13-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 RPIT_08215 5777589c62b9c4fbcccf2583c8782abc 387 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 387 131.407 T 13-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 RPIT_08215 5777589c62b9c4fbcccf2583c8782abc 387 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 21 385 1.0E-127 T 13-10-2018 RPIT_08150 8c1cd88f8ff245d09a66de7acae15331 170 Pfam PF08281 Sigma-70, region 4 104 157 1.3E-17 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIT_08150 8c1cd88f8ff245d09a66de7acae15331 170 SUPERFAMILY SSF88946 12 93 7.59E-14 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_08150 8c1cd88f8ff245d09a66de7acae15331 170 SUPERFAMILY SSF88659 102 159 1.31E-16 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like RPIT_08150 8c1cd88f8ff245d09a66de7acae15331 170 Gene3D G3DSA:1.10.1740.10 1 81 4.5E-10 T 13-10-2018 RPIT_08150 8c1cd88f8ff245d09a66de7acae15331 170 Gene3D G3DSA:1.10.10.10 82 163 6.0E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_08150 8c1cd88f8ff245d09a66de7acae15331 170 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 11 161 1.2E-48 T 13-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 RPIT_08150 8c1cd88f8ff245d09a66de7acae15331 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 159 5.0E-26 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 RPIT_08150 8c1cd88f8ff245d09a66de7acae15331 170 Pfam PF04542 Sigma-70 region 2 16 82 6.6E-8 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_11520 8c1cd88f8ff245d09a66de7acae15331 170 Pfam PF08281 Sigma-70, region 4 104 157 1.3E-17 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIT_11520 8c1cd88f8ff245d09a66de7acae15331 170 SUPERFAMILY SSF88946 12 93 7.59E-14 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_11520 8c1cd88f8ff245d09a66de7acae15331 170 SUPERFAMILY SSF88659 102 159 1.31E-16 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like RPIT_11520 8c1cd88f8ff245d09a66de7acae15331 170 Gene3D G3DSA:1.10.1740.10 1 81 4.5E-10 T 13-10-2018 RPIT_11520 8c1cd88f8ff245d09a66de7acae15331 170 Gene3D G3DSA:1.10.10.10 82 163 6.0E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_11520 8c1cd88f8ff245d09a66de7acae15331 170 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 11 161 1.2E-48 T 13-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 RPIT_11520 8c1cd88f8ff245d09a66de7acae15331 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 159 5.0E-26 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 RPIT_11520 8c1cd88f8ff245d09a66de7acae15331 170 Pfam PF04542 Sigma-70 region 2 16 82 6.6E-8 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 Pfam PF04945 YHS domain 866 910 1.1E-11 T 13-10-2018 IPR007029 YHS domain RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 SUPERFAMILY SSF81665 253 784 1.57E-15 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 237 814 7.4E-191 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 219 815 1.2E-186 T 13-10-2018 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 Pfam PF00122 E1-E2 ATPase 305 486 3.0E-57 T 13-10-2018 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 SUPERFAMILY SSF49503 16 119 3.56E-10 T 13-10-2018 IPR008972 Cupredoxin RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 Gene3D G3DSA:3.40.1110.10 517 637 5.5E-91 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 736 761 2.5E-10 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 705 721 2.5E-10 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 677 693 2.5E-10 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 652 662 1.0E-25 T 13-10-2018 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 705 724 1.0E-25 T 13-10-2018 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 728 740 1.0E-25 T 13-10-2018 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 630 641 1.0E-25 T 13-10-2018 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 354 368 1.0E-25 T 13-10-2018 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 506 520 1.0E-25 T 13-10-2018 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 Gene3D G3DSA:2.60.40.420 24 122 5.8E-28 T 13-10-2018 IPR008972 Cupredoxin RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 SUPERFAMILY SSF56784 505 811 7.61E-57 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 SMART SM00746 868 906 9.0E-5 T 13-10-2018 IPR011017 TRASH domain RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 Pfam PF00702 haloacid dehalogenase-like hydrolase 503 719 2.7E-43 T 13-10-2018 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 Pfam PF13473 Cupredoxin-like domain 15 116 3.5E-10 T 13-10-2018 IPR028096 EfeO-type cupredoxin-like domain RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 Gene3D G3DSA:3.40.50.1000 487 757 5.5E-91 T 13-10-2018 IPR023214 HAD superfamily RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 276 783 9.0E-90 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 Gene3D G3DSA:2.70.150.20 297 409 1.4E-40 T 13-10-2018 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 508 514 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 SUPERFAMILY SSF81653 306 404 1.7E-29 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 RPIT_07305 9360baf08d456e13eb522fdeebfd8763 930 Gene3D G3DSA:1.10.620.20 844 926 1.5E-5 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 RPIT_11795 88089c28e9dbf50e602ebaefe69bfd75 201 Gene3D G3DSA:3.30.1390.10 160 199 8.2E-9 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RPIT_11795 88089c28e9dbf50e602ebaefe69bfd75 201 Pfam PF08044 Domain of unknown function (DUF1707) 9 60 3.4E-19 T 13-10-2018 IPR012551 Protein of unknown function DUF1707 RPIT_11795 88089c28e9dbf50e602ebaefe69bfd75 201 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 168 193 6.3E-7 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_11795 88089c28e9dbf50e602ebaefe69bfd75 201 SUPERFAMILY SSF54736 162 195 5.58E-5 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RPIT_01070 96e52a87f622fc29f5e84950ea8c996d 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 284 1.5E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_01070 96e52a87f622fc29f5e84950ea8c996d 295 Gene3D G3DSA:1.10.3720.10 8 282 1.4E-57 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_01070 96e52a87f622fc29f5e84950ea8c996d 295 SUPERFAMILY SSF161098 14 295 2.34E-63 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_08200 97682b19f6aeadca2f7b681a095e63b8 165 Gene3D G3DSA:1.10.10.10 2 75 3.1E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_08200 97682b19f6aeadca2f7b681a095e63b8 165 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 95 138 1.0E-9 T 13-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 RPIT_08200 97682b19f6aeadca2f7b681a095e63b8 165 Hamap MF_00173 Arginine repressor [argR]. 1 158 50.83 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 RPIT_08200 97682b19f6aeadca2f7b681a095e63b8 165 SUPERFAMILY SSF46785 6 72 9.52E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_08200 97682b19f6aeadca2f7b681a095e63b8 165 SUPERFAMILY SSF55252 86 153 1.31E-17 T 13-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 RPIT_08200 97682b19f6aeadca2f7b681a095e63b8 165 Pfam PF01316 Arginine repressor, DNA binding domain 7 71 8.4E-17 T 13-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 RPIT_08200 97682b19f6aeadca2f7b681a095e63b8 165 Gene3D G3DSA:3.30.1360.40 77 154 2.4E-23 T 13-10-2018 RPIT_08200 97682b19f6aeadca2f7b681a095e63b8 165 Pfam PF02863 Arginine repressor, C-terminal domain 87 151 7.6E-21 T 13-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 RPIT_08200 97682b19f6aeadca2f7b681a095e63b8 165 PRINTS PR01467 Bacterial arginine repressor signature 26 39 4.5E-20 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 RPIT_08200 97682b19f6aeadca2f7b681a095e63b8 165 PRINTS PR01467 Bacterial arginine repressor signature 42 57 4.5E-20 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 RPIT_08200 97682b19f6aeadca2f7b681a095e63b8 165 PRINTS PR01467 Bacterial arginine repressor signature 124 139 4.5E-20 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 RPIT_08200 97682b19f6aeadca2f7b681a095e63b8 165 PRINTS PR01467 Bacterial arginine repressor signature 94 107 4.5E-20 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 RPIT_04155 0a6f2552c9df90f96c3172e28ef99505 684 Gene3D G3DSA:3.40.50.300 6 252 6.4E-69 T 13-10-2018 RPIT_04155 0a6f2552c9df90f96c3172e28ef99505 684 Gene3D G3DSA:3.40.50.300 422 603 3.7E-48 T 13-10-2018 RPIT_04155 0a6f2552c9df90f96c3172e28ef99505 684 Pfam PF12344 Ultra-violet resistance protein B 559 600 1.8E-21 T 13-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain RPIT_04155 0a6f2552c9df90f96c3172e28ef99505 684 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 15 673 0.0 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 RPIT_04155 0a6f2552c9df90f96c3172e28ef99505 684 SUPERFAMILY SSF52540 13 422 2.95E-130 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04155 0a6f2552c9df90f96c3172e28ef99505 684 SMART SM00487 18 433 7.3E-25 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIT_04155 0a6f2552c9df90f96c3172e28ef99505 684 Gene3D G3DSA:3.40.50.300 285 421 4.3E-53 T 13-10-2018 RPIT_04155 0a6f2552c9df90f96c3172e28ef99505 684 Hamap MF_00204 UvrABC system protein B [uvrB]. 12 675 41.88 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 RPIT_04155 0a6f2552c9df90f96c3172e28ef99505 684 Pfam PF04851 Type III restriction enzyme, res subunit 20 147 1.6E-8 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RPIT_04155 0a6f2552c9df90f96c3172e28ef99505 684 Pfam PF00271 Helicase conserved C-terminal domain 449 551 3.3E-17 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_04155 0a6f2552c9df90f96c3172e28ef99505 684 SUPERFAMILY SSF52540 42 575 2.95E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04155 0a6f2552c9df90f96c3172e28ef99505 684 SMART SM00490 467 553 1.9E-18 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_04155 0a6f2552c9df90f96c3172e28ef99505 684 Pfam PF02151 UvrB/uvrC motif 641 675 4.4E-9 T 13-10-2018 IPR001943 UVR domain GO:0005515 RPIT_04155 0a6f2552c9df90f96c3172e28ef99505 684 SUPERFAMILY SSF46600 635 676 9.55E-11 T 13-10-2018 IPR036876 UVR domain superfamily RPIT_04155 0a6f2552c9df90f96c3172e28ef99505 684 Gene3D G3DSA:4.10.860.10 631 680 1.1E-6 T 13-10-2018 RPIT_13210 cfa1aafff8a8706c203d0856ff563de3 389 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 330 339 - T 13-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 RPIT_13210 cfa1aafff8a8706c203d0856ff563de3 389 PRINTS PR00385 P450 superfamily signature 328 337 7.0E-6 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 RPIT_13210 cfa1aafff8a8706c203d0856ff563de3 389 PRINTS PR00385 P450 superfamily signature 216 233 7.0E-6 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 RPIT_13210 cfa1aafff8a8706c203d0856ff563de3 389 PRINTS PR00385 P450 superfamily signature 337 348 7.0E-6 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 RPIT_13210 cfa1aafff8a8706c203d0856ff563de3 389 PRINTS PR00385 P450 superfamily signature 252 263 7.0E-6 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 RPIT_13210 cfa1aafff8a8706c203d0856ff563de3 389 Gene3D G3DSA:1.10.630.10 2 374 5.2E-45 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 RPIT_13210 cfa1aafff8a8706c203d0856ff563de3 389 Pfam PF00067 Cytochrome P450 252 355 5.4E-10 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 RPIT_13210 cfa1aafff8a8706c203d0856ff563de3 389 SUPERFAMILY SSF48264 15 365 1.03E-40 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 RPIT_13210 cfa1aafff8a8706c203d0856ff563de3 389 PRINTS PR00359 B-class P450 signature 175 197 6.6E-9 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RPIT_13210 cfa1aafff8a8706c203d0856ff563de3 389 PRINTS PR00359 B-class P450 signature 328 337 6.6E-9 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RPIT_13210 cfa1aafff8a8706c203d0856ff563de3 389 PRINTS PR00359 B-class P450 signature 337 348 6.6E-9 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RPIT_13210 cfa1aafff8a8706c203d0856ff563de3 389 PRINTS PR00359 B-class P450 signature 252 263 6.6E-9 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RPIT_13210 cfa1aafff8a8706c203d0856ff563de3 389 PRINTS PR00359 B-class P450 signature 59 70 6.6E-9 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RPIT_00425 ea88e808da521012dee86c7740be137c 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 266 282 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIT_00425 ea88e808da521012dee86c7740be137c 397 SUPERFAMILY SSF103473 11 393 8.76E-65 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_00425 ea88e808da521012dee86c7740be137c 397 PRINTS PR01035 Tetracycline resistance protein signature 135 157 2.8E-11 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RPIT_00425 ea88e808da521012dee86c7740be137c 397 PRINTS PR01035 Tetracycline resistance protein signature 248 268 2.8E-11 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RPIT_00425 ea88e808da521012dee86c7740be137c 397 PRINTS PR01035 Tetracycline resistance protein signature 163 183 2.8E-11 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RPIT_00425 ea88e808da521012dee86c7740be137c 397 PRINTS PR01035 Tetracycline resistance protein signature 20 36 2.8E-11 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RPIT_00425 ea88e808da521012dee86c7740be137c 397 PRINTS PR01035 Tetracycline resistance protein signature 77 101 2.8E-11 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RPIT_00425 ea88e808da521012dee86c7740be137c 397 Pfam PF07690 Major Facilitator Superfamily 15 232 3.5E-27 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIT_00425 ea88e808da521012dee86c7740be137c 397 Gene3D G3DSA:1.20.1720.10 231 397 4.7E-23 T 13-10-2018 RPIT_00425 ea88e808da521012dee86c7740be137c 397 Pfam PF05977 Transmembrane secretion effector 265 380 2.3E-6 T 13-10-2018 IPR010290 Transmembrane secretion effector RPIT_00425 ea88e808da521012dee86c7740be137c 397 Gene3D G3DSA:1.20.1250.20 7 230 6.6E-40 T 13-10-2018 RPIT_11935 1848c4979e317c7532e256e37b420fe4 299 SUPERFAMILY SSF50346 10 106 1.75E-18 T 13-10-2018 IPR011033 PRC-barrel-like superfamily RPIT_11935 1848c4979e317c7532e256e37b420fe4 299 Pfam PF05239 PRC-barrel domain 4 74 3.9E-10 T 13-10-2018 IPR027275 PRC-barrel domain RPIT_11935 1848c4979e317c7532e256e37b420fe4 299 Gene3D G3DSA:3.90.50.10 4 109 1.7E-8 T 13-10-2018 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal GO:0019684|GO:0030077|GO:0045156 RPIT_12525 b2ce832c388325e290cbd84791bed124 286 Gene3D G3DSA:3.20.20.150 1 284 4.7E-63 T 13-10-2018 RPIT_12525 b2ce832c388325e290cbd84791bed124 286 SUPERFAMILY SSF51658 22 285 5.11E-48 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily RPIT_12525 b2ce832c388325e290cbd84791bed124 286 Pfam PF01261 Xylose isomerase-like TIM barrel 28 235 1.4E-26 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain RPIT_00455 cecb9afb61645ffdb84ab7660db8fecb 177 Pfam PF02467 Transcription factor WhiB 37 77 8.9E-8 T 13-10-2018 IPR034768 WhiB-like iron-sulfur binding domain RPIT_00455 cecb9afb61645ffdb84ab7660db8fecb 177 Gene3D G3DSA:1.10.10.10 106 148 3.4E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_02075 f75bda2c60cdf03ee3ee1da46ac531b1 328 SUPERFAMILY SSF47413 4 50 5.63E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_02075 f75bda2c60cdf03ee3ee1da46ac531b1 328 SMART SM00354 4 70 1.1E-12 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_02075 f75bda2c60cdf03ee3ee1da46ac531b1 328 Gene3D G3DSA:3.40.50.2300 163 284 1.3E-55 T 13-10-2018 RPIT_02075 f75bda2c60cdf03ee3ee1da46ac531b1 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 13-10-2018 RPIT_02075 f75bda2c60cdf03ee3ee1da46ac531b1 328 SUPERFAMILY SSF53822 61 326 1.99E-55 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_02075 f75bda2c60cdf03ee3ee1da46ac531b1 328 Gene3D G3DSA:1.10.260.40 2 48 3.0E-15 T 13-10-2018 RPIT_02075 f75bda2c60cdf03ee3ee1da46ac531b1 328 Pfam PF13377 Periplasmic binding protein-like domain 171 324 1.6E-31 T 13-10-2018 RPIT_02075 f75bda2c60cdf03ee3ee1da46ac531b1 328 Gene3D G3DSA:3.40.50.2300 61 303 1.3E-55 T 13-10-2018 RPIT_02075 f75bda2c60cdf03ee3ee1da46ac531b1 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 49 1.1E-13 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_03720 60264d5b4ddb9c8901137b5c19591d3c 227 Pfam PF00510 Cytochrome c oxidase subunit III 30 225 1.3E-22 T 13-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03720 60264d5b4ddb9c8901137b5c19591d3c 227 Gene3D G3DSA:1.20.120.80 26 227 4.9E-50 T 13-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03720 60264d5b4ddb9c8901137b5c19591d3c 227 SUPERFAMILY SSF81452 29 226 7.59E-47 T 13-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_10010 001fbae3fdf4e7393373ebc7937cbf90 162 Pfam PF00293 NUDIX domain 13 132 1.1E-14 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 RPIT_10010 001fbae3fdf4e7393373ebc7937cbf90 162 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RPIT_10010 001fbae3fdf4e7393373ebc7937cbf90 162 SUPERFAMILY SSF55811 8 138 8.12E-25 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 RPIT_10010 001fbae3fdf4e7393373ebc7937cbf90 162 Gene3D G3DSA:3.90.79.10 8 155 1.9E-30 T 13-10-2018 RPIT_02950 b380af9480b8f9d64cbc272f432afbc6 123 Pfam PF00164 Ribosomal protein S12/S23 13 123 8.6E-43 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_02950 b380af9480b8f9d64cbc272f432afbc6 123 PIRSF PIRSF002133 1 123 9.3E-54 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_02950 b380af9480b8f9d64cbc272f432afbc6 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 2 123 1.8E-66 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_02950 b380af9480b8f9d64cbc272f432afbc6 123 SUPERFAMILY SSF50249 2 123 3.68E-52 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_02950 b380af9480b8f9d64cbc272f432afbc6 123 Gene3D G3DSA:2.40.50.140 1 123 3.4E-62 T 13-10-2018 RPIT_02950 b380af9480b8f9d64cbc272f432afbc6 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 4.4E-58 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_02950 b380af9480b8f9d64cbc272f432afbc6 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 4.4E-58 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_02950 b380af9480b8f9d64cbc272f432afbc6 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 4.4E-58 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_02950 b380af9480b8f9d64cbc272f432afbc6 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 4.4E-58 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_02950 b380af9480b8f9d64cbc272f432afbc6 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 4.4E-58 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_02950 b380af9480b8f9d64cbc272f432afbc6 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 4.4E-58 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_02950 b380af9480b8f9d64cbc272f432afbc6 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_02950 b380af9480b8f9d64cbc272f432afbc6 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.765 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_14345 be104188054810eafcce21750dfedfe6 884 SUPERFAMILY SSF52009 390 510 4.19E-35 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 RPIT_14345 be104188054810eafcce21750dfedfe6 884 Gene3D G3DSA:3.50.30.10 384 508 5.9E-73 T 13-10-2018 RPIT_14345 be104188054810eafcce21750dfedfe6 884 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 518 877 5.0E-91 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RPIT_14345 be104188054810eafcce21750dfedfe6 884 SUPERFAMILY SSF56059 4 380 1.11E-135 T 13-10-2018 RPIT_14345 be104188054810eafcce21750dfedfe6 884 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 301 355 3.1E-11 T 13-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 RPIT_14345 be104188054810eafcce21750dfedfe6 884 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 19 290 1.0E-39 T 13-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 RPIT_14345 be104188054810eafcce21750dfedfe6 884 Pfam PF00391 PEP-utilising enzyme, mobile domain 421 502 9.8E-26 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIT_14345 be104188054810eafcce21750dfedfe6 884 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 5 878 0.0 T 13-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RPIT_14345 be104188054810eafcce21750dfedfe6 884 Gene3D G3DSA:3.30.470.20 245 342 3.5E-42 T 13-10-2018 RPIT_14345 be104188054810eafcce21750dfedfe6 884 Gene3D G3DSA:1.20.80.30 112 199 3.5E-92 T 13-10-2018 RPIT_14345 be104188054810eafcce21750dfedfe6 884 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 449 460 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RPIT_14345 be104188054810eafcce21750dfedfe6 884 PIRSF PIRSF000853 3 884 0.0 T 13-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RPIT_14345 be104188054810eafcce21750dfedfe6 884 Gene3D G3DSA:1.10.189.10 346 528 5.9E-73 T 13-10-2018 RPIT_14345 be104188054810eafcce21750dfedfe6 884 Gene3D G3DSA:3.20.20.60 531 879 8.3E-143 T 13-10-2018 RPIT_14345 be104188054810eafcce21750dfedfe6 884 Gene3D G3DSA:3.30.1490.20 12 244 3.5E-92 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 RPIT_14345 be104188054810eafcce21750dfedfe6 884 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 768 786 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RPIT_14345 be104188054810eafcce21750dfedfe6 884 SUPERFAMILY SSF51621 511 877 1.51E-117 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 RPIT_09575 17b12d886a07194f05da9344baf2f3f7 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 370 446 3.4E-12 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09575 17b12d886a07194f05da9344baf2f3f7 449 Gene3D G3DSA:3.40.120.10 248 362 5.3E-34 T 13-10-2018 RPIT_09575 17b12d886a07194f05da9344baf2f3f7 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 362 5.2E-24 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09575 17b12d886a07194f05da9344baf2f3f7 449 Gene3D G3DSA:3.40.120.10 3 140 1.1E-32 T 13-10-2018 RPIT_09575 17b12d886a07194f05da9344baf2f3f7 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 202 215 8.1E-20 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09575 17b12d886a07194f05da9344baf2f3f7 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 231 246 8.1E-20 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09575 17b12d886a07194f05da9344baf2f3f7 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 8.1E-20 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09575 17b12d886a07194f05da9344baf2f3f7 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 8.1E-20 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09575 17b12d886a07194f05da9344baf2f3f7 449 SUPERFAMILY SSF55957 365 448 1.06E-17 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09575 17b12d886a07194f05da9344baf2f3f7 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09575 17b12d886a07194f05da9344baf2f3f7 449 SUPERFAMILY SSF53738 255 360 7.36E-30 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09575 17b12d886a07194f05da9344baf2f3f7 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 130 2.5E-25 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09575 17b12d886a07194f05da9344baf2f3f7 449 SUPERFAMILY SSF53738 3 133 1.45E-27 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09575 17b12d886a07194f05da9344baf2f3f7 449 Gene3D G3DSA:3.40.120.10 171 247 7.5E-30 T 13-10-2018 RPIT_09575 17b12d886a07194f05da9344baf2f3f7 449 SUPERFAMILY SSF53738 151 253 5.49E-25 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09575 17b12d886a07194f05da9344baf2f3f7 449 Gene3D G3DSA:3.30.310.50 367 448 5.3E-21 T 13-10-2018 RPIT_09575 17b12d886a07194f05da9344baf2f3f7 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 251 1.2E-22 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_02720 087d21692e32a074561c90909de2d2c4 628 SUPERFAMILY SSF52518 236 503 1.33E-61 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_02720 087d21692e32a074561c90909de2d2c4 628 SUPERFAMILY SSF52922 522 611 6.75E-11 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 RPIT_02720 087d21692e32a074561c90909de2d2c4 628 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 255 478 1.4E-54 T 13-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 RPIT_02720 087d21692e32a074561c90909de2d2c4 628 SUPERFAMILY SSF53323 17 232 6.67E-18 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 RPIT_02720 087d21692e32a074561c90909de2d2c4 628 Gene3D G3DSA:3.40.920.10 13 224 1.3E-13 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 RPIT_02720 087d21692e32a074561c90909de2d2c4 628 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 15 614 1.6E-194 T 13-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 RPIT_02720 087d21692e32a074561c90909de2d2c4 628 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 23 212 1.3E-24 T 13-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RPIT_02720 087d21692e32a074561c90909de2d2c4 628 Gene3D G3DSA:3.40.50.920 518 619 3.0E-15 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 RPIT_02720 087d21692e32a074561c90909de2d2c4 628 Gene3D G3DSA:3.40.50.970 225 429 3.9E-66 T 13-10-2018 RPIT_10710 81344f80d1145b6248f38ff9e8ef0ec1 210 SUPERFAMILY SSF101386 3 100 7.85E-23 T 13-10-2018 RPIT_10710 81344f80d1145b6248f38ff9e8ef0ec1 210 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 24 97 5.2E-27 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core RPIT_10710 81344f80d1145b6248f38ff9e8ef0ec1 210 Gene3D G3DSA:1.10.287.1080 1 119 1.9E-40 T 13-10-2018 RPIT_01805 714ef9fc9fd9239a289d30ff0782f42a 165 Pfam PF08768 Domain of unknown function (DUF1794) 13 164 2.0E-41 T 13-10-2018 IPR014878 Domain of unknown function DUF1794 RPIT_01805 714ef9fc9fd9239a289d30ff0782f42a 165 Hamap MF_01297 UPF0678 fatty acid-binding protein-like protein . 5 165 26.716 T 13-10-2018 IPR022939 Uncharacterised protein family UPF0678 RPIT_01805 714ef9fc9fd9239a289d30ff0782f42a 165 SUPERFAMILY SSF50814 8 165 3.25E-36 T 13-10-2018 IPR012674 Calycin RPIT_01805 714ef9fc9fd9239a289d30ff0782f42a 165 Gene3D G3DSA:2.40.128.20 2 165 1.0E-53 T 13-10-2018 IPR012674 Calycin RPIT_01545 8e12a527e4b1f2272f804a42947c9372 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 369 383 3.6E-19 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIT_01545 8e12a527e4b1f2272f804a42947c9372 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 297 319 3.6E-19 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIT_01545 8e12a527e4b1f2272f804a42947c9372 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 354 368 3.6E-19 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIT_01545 8e12a527e4b1f2272f804a42947c9372 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 136 155 3.6E-19 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIT_01545 8e12a527e4b1f2272f804a42947c9372 480 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 434 447 3.6E-19 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIT_01545 8e12a527e4b1f2272f804a42947c9372 480 SUPERFAMILY SSF56601 104 476 6.16E-61 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like RPIT_01545 8e12a527e4b1f2272f804a42947c9372 480 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 262 457 3.7E-37 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIT_01545 8e12a527e4b1f2272f804a42947c9372 480 Gene3D G3DSA:3.40.710.10 97 228 8.0E-8 T 13-10-2018 RPIT_01545 8e12a527e4b1f2272f804a42947c9372 480 Gene3D G3DSA:3.40.710.10 269 470 6.8E-52 T 13-10-2018 RPIT_01545 8e12a527e4b1f2272f804a42947c9372 480 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 111 254 1.1E-15 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIT_01545 8e12a527e4b1f2272f804a42947c9372 480 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 261 463 2.2E-47 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIT_04315 9345be453ccae150a1b1dabcb532b96a 663 Gene3D G3DSA:1.10.1370.40 33 651 1.1E-180 T 13-10-2018 RPIT_04315 9345be453ccae150a1b1dabcb532b96a 663 Pfam PF01432 Peptidase family M3 226 656 1.7E-85 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 RPIT_04315 9345be453ccae150a1b1dabcb532b96a 663 SUPERFAMILY SSF55486 4 656 8.42E-133 T 13-10-2018 RPIT_04315 9345be453ccae150a1b1dabcb532b96a 663 Gene3D G3DSA:1.10.1370.10 146 590 1.1E-180 T 13-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RPIT_14870 049c44a76b20d9789c925ab37fc19c0b 104 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 6 104 2.6E-21 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE RPIT_14870 049c44a76b20d9789c925ab37fc19c0b 104 Gene3D G3DSA:3.30.1420.10 1 37 4.5E-10 T 13-10-2018 RPIT_14870 049c44a76b20d9789c925ab37fc19c0b 104 PIRSF PIRSF006223 4 104 2.9E-25 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE RPIT_14870 049c44a76b20d9789c925ab37fc19c0b 104 SUPERFAMILY SSF69721 5 104 3.01E-29 T 13-10-2018 IPR025526 DsrC-like domain superfamily RPIT_14870 049c44a76b20d9789c925ab37fc19c0b 104 Pfam PF04358 DsrC like protein 6 104 1.8E-26 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE RPIT_14870 049c44a76b20d9789c925ab37fc19c0b 104 Gene3D G3DSA:1.10.10.370 41 104 9.1E-20 T 13-10-2018 RPIT_01510 6b977b382a63e7572e6580408ff8c794 112 Gene3D G3DSA:3.30.70.120 1 112 3.6E-38 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RPIT_01510 6b977b382a63e7572e6580408ff8c794 112 SMART SM00938 4 105 4.8E-46 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIT_01510 6b977b382a63e7572e6580408ff8c794 112 SUPERFAMILY SSF54913 1 112 7.94E-36 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta RPIT_01510 6b977b382a63e7572e6580408ff8c794 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 13-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 RPIT_01510 6b977b382a63e7572e6580408ff8c794 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 7.0E-34 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIT_01510 6b977b382a63e7572e6580408ff8c794 112 PRINTS PR00340 P-II protein signature 52 75 9.0E-30 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIT_01510 6b977b382a63e7572e6580408ff8c794 112 PRINTS PR00340 P-II protein signature 23 41 9.0E-30 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIT_01510 6b977b382a63e7572e6580408ff8c794 112 PRINTS PR00340 P-II protein signature 2 17 9.0E-30 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIT_01510 6b977b382a63e7572e6580408ff8c794 112 PRINTS PR00340 P-II protein signature 83 103 9.0E-30 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIT_09870 6a86601a47196188316a5a1b79326bec 391 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 250 274 - T 13-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RPIT_09870 6a86601a47196188316a5a1b79326bec 391 Gene3D G3DSA:3.40.50.261 234 389 4.0E-45 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RPIT_09870 6a86601a47196188316a5a1b79326bec 391 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 388 36.745 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RPIT_09870 6a86601a47196188316a5a1b79326bec 391 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 2 386 8.0E-122 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RPIT_09870 6a86601a47196188316a5a1b79326bec 391 Pfam PF08442 ATP-grasp domain 3 195 1.0E-63 T 13-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RPIT_09870 6a86601a47196188316a5a1b79326bec 391 SUPERFAMILY SSF56059 3 228 1.89E-66 T 13-10-2018 RPIT_09870 6a86601a47196188316a5a1b79326bec 391 PIRSF PIRSF001554 1 390 2.7E-131 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RPIT_09870 6a86601a47196188316a5a1b79326bec 391 SUPERFAMILY SSF52210 234 387 2.62E-39 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RPIT_09870 6a86601a47196188316a5a1b79326bec 391 Gene3D G3DSA:3.30.470.20 2 224 7.1E-78 T 13-10-2018 RPIT_09870 6a86601a47196188316a5a1b79326bec 391 Pfam PF00549 CoA-ligase 257 381 8.2E-16 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RPIT_09870 6a86601a47196188316a5a1b79326bec 391 Gene3D G3DSA:3.30.1490.20 21 97 7.1E-78 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 RPIT_07970 df93f8759adb8b403d0ac5a6d8cd422d 580 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 430 449 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 RPIT_07970 df93f8759adb8b403d0ac5a6d8cd422d 580 SUPERFAMILY SSF52518 6 188 2.73E-60 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_07970 df93f8759adb8b403d0ac5a6d8cd422d 580 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 172 6.3E-54 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RPIT_07970 df93f8759adb8b403d0ac5a6d8cd422d 580 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 333 2.2E-50 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RPIT_07970 df93f8759adb8b403d0ac5a6d8cd422d 580 Gene3D G3DSA:3.40.50.1220 192 359 1.7E-64 T 13-10-2018 RPIT_07970 df93f8759adb8b403d0ac5a6d8cd422d 580 Gene3D G3DSA:3.40.50.970 1 177 2.0E-68 T 13-10-2018 RPIT_07970 df93f8759adb8b403d0ac5a6d8cd422d 580 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 543 1.3E-47 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RPIT_07970 df93f8759adb8b403d0ac5a6d8cd422d 580 Gene3D G3DSA:3.40.50.970 362 578 6.4E-68 T 13-10-2018 RPIT_07970 df93f8759adb8b403d0ac5a6d8cd422d 580 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 9 567 2.4E-233 T 13-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 RPIT_07970 df93f8759adb8b403d0ac5a6d8cd422d 580 SUPERFAMILY SSF52518 370 576 4.47E-67 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_07970 df93f8759adb8b403d0ac5a6d8cd422d 580 SUPERFAMILY SSF52467 191 359 2.96E-61 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily RPIT_08090 75d5c826b0f8e6aefca982dc8b15c3f6 560 SUPERFAMILY SSF52540 1 215 2.0E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_08090 75d5c826b0f8e6aefca982dc8b15c3f6 560 SUPERFAMILY SSF52540 3 506 2.92E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_08090 75d5c826b0f8e6aefca982dc8b15c3f6 560 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 509 7.8E-12 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal RPIT_08090 75d5c826b0f8e6aefca982dc8b15c3f6 560 PIRSF PIRSF003128 1 557 6.8E-147 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RPIT_08090 75d5c826b0f8e6aefca982dc8b15c3f6 560 Gene3D G3DSA:3.40.50.300 1 268 6.1E-37 T 13-10-2018 RPIT_08090 75d5c826b0f8e6aefca982dc8b15c3f6 560 Gene3D G3DSA:3.40.50.300 269 553 5.8E-55 T 13-10-2018 RPIT_08090 75d5c826b0f8e6aefca982dc8b15c3f6 560 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 2.1E-149 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RPIT_13685 c5e175a3ad6f37cc0ef55dc304388982 402 Pfam PF02661 Fic/DOC family 137 240 1.2E-19 T 13-10-2018 IPR003812 Fido domain RPIT_13685 c5e175a3ad6f37cc0ef55dc304388982 402 Gene3D G3DSA:1.10.3290.10 78 289 6.7E-40 T 13-10-2018 IPR036597 Fido-like domain superfamily RPIT_13685 c5e175a3ad6f37cc0ef55dc304388982 402 SUPERFAMILY SSF46785 309 383 6.82E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_13685 c5e175a3ad6f37cc0ef55dc304388982 402 SUPERFAMILY SSF140931 126 305 3.14E-34 T 13-10-2018 IPR036597 Fido-like domain superfamily RPIT_00605 3c03ad18beba66551ea3d94fe37008f3 430 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 2 411 7.6E-96 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RPIT_00605 3c03ad18beba66551ea3d94fe37008f3 430 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 214 298 1.9E-18 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_00605 3c03ad18beba66551ea3d94fe37008f3 430 SUPERFAMILY SSF51735 2 192 1.6E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_00605 3c03ad18beba66551ea3d94fe37008f3 430 PIRSF PIRSF000124 1 430 9.0E-58 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RPIT_00605 3c03ad18beba66551ea3d94fe37008f3 430 SUPERFAMILY SSF52413 313 423 2.49E-16 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 RPIT_00605 3c03ad18beba66551ea3d94fe37008f3 430 Gene3D G3DSA:3.40.50.720 212 430 4.4E-49 T 13-10-2018 RPIT_00605 3c03ad18beba66551ea3d94fe37008f3 430 SUPERFAMILY SSF48179 213 304 2.21E-21 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 RPIT_00605 3c03ad18beba66551ea3d94fe37008f3 430 PIRSF PIRSF500136 1 428 6.8E-106 T 13-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 RPIT_00605 3c03ad18beba66551ea3d94fe37008f3 430 SMART SM00984 322 415 6.8E-13 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_00605 3c03ad18beba66551ea3d94fe37008f3 430 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 322 415 6.5E-11 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_00605 3c03ad18beba66551ea3d94fe37008f3 430 Gene3D G3DSA:3.40.50.720 1 199 4.2E-59 T 13-10-2018 RPIT_00605 3c03ad18beba66551ea3d94fe37008f3 430 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2 182 3.0E-33 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_05205 50775f8a566e760114be3571a293894b 329 SUPERFAMILY SSF53901 11 323 4.16E-64 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 RPIT_05205 50775f8a566e760114be3571a293894b 329 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 11 326 3.0E-107 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RPIT_05205 50775f8a566e760114be3571a293894b 329 Gene3D G3DSA:3.40.47.10 2 176 1.9E-64 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 RPIT_05205 50775f8a566e760114be3571a293894b 329 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 115 189 3.2E-25 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RPIT_05205 50775f8a566e760114be3571a293894b 329 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 10 328 58.237 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RPIT_05205 50775f8a566e760114be3571a293894b 329 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 238 326 2.0E-27 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RPIT_05205 50775f8a566e760114be3571a293894b 329 Gene3D G3DSA:3.40.47.10 177 329 1.4E-40 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 RPIT_02665 363a608c2b4f2de338469cb8b4b3ceea 447 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 8 359 23.805 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02665 363a608c2b4f2de338469cb8b4b3ceea 447 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 54 69 - T 13-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02665 363a608c2b4f2de338469cb8b4b3ceea 447 Pfam PF00146 NADH dehydrogenase 15 352 1.2E-118 T 13-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02665 363a608c2b4f2de338469cb8b4b3ceea 447 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 236 249 - T 13-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_11830 bb3e179d9ab9a765a95767672cdf75e4 235 Gene3D G3DSA:3.40.50.720 2 217 1.0E-42 T 13-10-2018 RPIT_11830 bb3e179d9ab9a765a95767672cdf75e4 235 SUPERFAMILY SSF51735 1 191 5.59E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_11830 bb3e179d9ab9a765a95767672cdf75e4 235 Pfam PF13460 NAD(P)H-binding 7 188 3.1E-40 T 13-10-2018 IPR016040 NAD(P)-binding domain RPIT_11960 d3a52282eb84dbc83d9c7532d51140ec 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 268 1.5E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_11960 d3a52282eb84dbc83d9c7532d51140ec 274 SUPERFAMILY SSF161098 3 273 6.82E-60 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_11960 d3a52282eb84dbc83d9c7532d51140ec 274 Gene3D G3DSA:1.10.3720.10 1 266 1.6E-57 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_11680 4062bbe58e44a242dbcb17e7918a0c02 444 Gene3D G3DSA:3.40.190.10 175 393 2.6E-61 T 13-10-2018 RPIT_11680 4062bbe58e44a242dbcb17e7918a0c02 444 Pfam PF13416 Bacterial extracellular solute-binding protein 80 385 1.9E-33 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein RPIT_11680 4062bbe58e44a242dbcb17e7918a0c02 444 Gene3D G3DSA:3.40.190.10 86 386 2.6E-61 T 13-10-2018 RPIT_11680 4062bbe58e44a242dbcb17e7918a0c02 444 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 170 187 - T 13-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 RPIT_11680 4062bbe58e44a242dbcb17e7918a0c02 444 SUPERFAMILY SSF53850 66 437 5.98E-50 T 13-10-2018 RPIT_00675 2f1bfd65a174085d0452da3984f64315 380 Pfam PF00365 Phosphofructokinase 11 325 5.9E-90 T 13-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_00675 2f1bfd65a174085d0452da3984f64315 380 PIRSF PIRSF000532 8 380 3.7E-107 T 13-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 RPIT_00675 2f1bfd65a174085d0452da3984f64315 380 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 10 379 39.659 T 13-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 RPIT_00675 2f1bfd65a174085d0452da3984f64315 380 SUPERFAMILY SSF53784 9 371 6.28E-104 T 13-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_00675 2f1bfd65a174085d0452da3984f64315 380 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 173 189 1.6E-49 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_00675 2f1bfd65a174085d0452da3984f64315 380 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 14 33 1.6E-49 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_00675 2f1bfd65a174085d0452da3984f64315 380 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 135 152 1.6E-49 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_00675 2f1bfd65a174085d0452da3984f64315 380 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 40 53 1.6E-49 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_00675 2f1bfd65a174085d0452da3984f64315 380 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 108 124 1.6E-49 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_00675 2f1bfd65a174085d0452da3984f64315 380 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 191 208 1.6E-49 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_00675 2f1bfd65a174085d0452da3984f64315 380 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 227 239 1.6E-49 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_00675 2f1bfd65a174085d0452da3984f64315 380 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 153 171 1.6E-49 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05295 3834aab582b7c34915c84f5ac3f70f07 228 SUPERFAMILY SSF52540 1 219 1.86E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_05295 3834aab582b7c34915c84f5ac3f70f07 228 Pfam PF00005 ABC transporter 19 166 8.3E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_05295 3834aab582b7c34915c84f5ac3f70f07 228 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 32 45 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RPIT_05295 3834aab582b7c34915c84f5ac3f70f07 228 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_05295 3834aab582b7c34915c84f5ac3f70f07 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 4.6E-83 T 13-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 RPIT_05295 3834aab582b7c34915c84f5ac3f70f07 228 SMART SM00382 28 215 6.4E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_05295 3834aab582b7c34915c84f5ac3f70f07 228 Gene3D G3DSA:3.40.50.300 1 224 3.4E-71 T 13-10-2018 RPIT_03110 0e3ed7172fdc91a0070e3ecbe9bf7700 103 ProSitePatterns PS00380 Rhodanese signature 1. 28 39 - T 13-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 RPIT_03110 0e3ed7172fdc91a0070e3ecbe9bf7700 103 SUPERFAMILY SSF52821 2 100 4.58E-28 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_03110 0e3ed7172fdc91a0070e3ecbe9bf7700 103 SMART SM00450 2 95 3.2E-12 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_03110 0e3ed7172fdc91a0070e3ecbe9bf7700 103 Gene3D G3DSA:3.40.250.10 2 100 3.6E-22 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_03110 0e3ed7172fdc91a0070e3ecbe9bf7700 103 Pfam PF00581 Rhodanese-like domain 10 90 1.4E-8 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_04975 5a00bfac9291e530ca80fe560d249965 242 SUPERFAMILY SSF75217 76 237 3.19E-41 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases RPIT_04975 5a00bfac9291e530ca80fe560d249965 242 PIRSF PIRSF015601 5 242 2.9E-42 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 RPIT_04975 5a00bfac9291e530ca80fe560d249965 242 Gene3D G3DSA:2.40.240.20 1 71 1.0E-15 T 13-10-2018 RPIT_04975 5a00bfac9291e530ca80fe560d249965 242 Pfam PF04452 RNA methyltransferase 21 236 1.5E-55 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 RPIT_04975 5a00bfac9291e530ca80fe560d249965 242 SUPERFAMILY SSF88697 13 72 6.96E-9 T 13-10-2018 IPR015947 PUA-like superfamily RPIT_04975 5a00bfac9291e530ca80fe560d249965 242 Gene3D G3DSA:3.40.1280.10 76 242 2.6E-47 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIT_04975 5a00bfac9291e530ca80fe560d249965 242 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 20 238 5.4E-33 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 RPIT_01000 802f7b620088dd1051061f5602de3a88 465 Gene3D G3DSA:3.40.50.300 202 369 1.0E-27 T 13-10-2018 RPIT_01000 802f7b620088dd1051061f5602de3a88 465 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 248 367 1.3E-15 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RPIT_01000 802f7b620088dd1051061f5602de3a88 465 SUPERFAMILY SSF52540 211 433 1.11E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01000 802f7b620088dd1051061f5602de3a88 465 Gene3D G3DSA:1.10.8.60 370 451 3.7E-5 T 13-10-2018 RPIT_01000 802f7b620088dd1051061f5602de3a88 465 SMART SM00382 244 370 1.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_08270 6cb49dbd4a3b5f6abccb8ad6110af0f3 122 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 7.0E-21 T 13-10-2018 RPIT_08270 6cb49dbd4a3b5f6abccb8ad6110af0f3 122 SUPERFAMILY SSF74731 3 115 1.7E-45 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08270 6cb49dbd4a3b5f6abccb8ad6110af0f3 122 Gene3D G3DSA:1.10.1900.20 57 117 3.0E-28 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08270 6cb49dbd4a3b5f6abccb8ad6110af0f3 122 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.95 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08270 6cb49dbd4a3b5f6abccb8ad6110af0f3 122 Pfam PF00453 Ribosomal protein L20 3 109 1.7E-44 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08270 6cb49dbd4a3b5f6abccb8ad6110af0f3 122 Gene3D G3DSA:1.10.720.90 2 56 4.8E-18 T 13-10-2018 RPIT_08270 6cb49dbd4a3b5f6abccb8ad6110af0f3 122 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08270 6cb49dbd4a3b5f6abccb8ad6110af0f3 122 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.0E-45 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08270 6cb49dbd4a3b5f6abccb8ad6110af0f3 122 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.5E-38 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08270 6cb49dbd4a3b5f6abccb8ad6110af0f3 122 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.5E-38 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08270 6cb49dbd4a3b5f6abccb8ad6110af0f3 122 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.5E-38 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_01450 343adc830bc0494f1ab2ccab2cc66cb2 234 SMART SM00382 34 205 3.6E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_01450 343adc830bc0494f1ab2ccab2cc66cb2 234 Pfam PF00005 ABC transporter 32 60 4.5E-6 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_01450 343adc830bc0494f1ab2ccab2cc66cb2 234 Gene3D G3DSA:3.40.50.300 131 220 1.1E-5 T 13-10-2018 RPIT_01450 343adc830bc0494f1ab2ccab2cc66cb2 234 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 145 189 1.3E-8 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RPIT_01450 343adc830bc0494f1ab2ccab2cc66cb2 234 Gene3D G3DSA:3.40.50.300 23 127 6.5E-6 T 13-10-2018 RPIT_01450 343adc830bc0494f1ab2ccab2cc66cb2 234 SUPERFAMILY SSF52540 37 216 2.36E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10965 7a750f8ed7a14b42f3dd58367ca80c95 490 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 76 262 2.0E-7 T 13-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 RPIT_10965 7a750f8ed7a14b42f3dd58367ca80c95 490 Pfam PF16192 C-terminal four TMM region of protein-O-mannosyltransferase 295 486 3.9E-12 T 13-10-2018 IPR032421 Protein O-mannosyl-transferase, C-terminal four TM domain KEGG: 00514+2.4.1.109|KEGG: 00515+2.4.1.109|MetaCyc: PWY-7921|MetaCyc: PWY-7922|MetaCyc: PWY-7979|Reactome: R-HSA-5173105 RPIT_11490 713651c67339b8f961a0ef9d42ffcf8a 589 Gene3D G3DSA:3.40.275.10 174 338 8.4E-72 T 13-10-2018 IPR038392 L-fucose isomerase, domain 2 superfamily KEGG: 00051+5.3.1.25 RPIT_11490 713651c67339b8f961a0ef9d42ffcf8a 589 TIGRFAM TIGR01089 fucI: L-fucose isomerase 3 588 3.0E-280 T 13-10-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 RPIT_11490 713651c67339b8f961a0ef9d42ffcf8a 589 Gene3D G3DSA:3.40.50.1070 1 173 2.8E-80 T 13-10-2018 IPR038391 L-fucose isomerase, domain 1 superfamily KEGG: 00051+5.3.1.25 RPIT_11490 713651c67339b8f961a0ef9d42ffcf8a 589 SUPERFAMILY SSF50443 354 589 8.63E-115 T 13-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal RPIT_11490 713651c67339b8f961a0ef9d42ffcf8a 589 Pfam PF07882 L-fucose isomerase, second N-terminal domain 173 352 1.4E-85 T 13-10-2018 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 RPIT_11490 713651c67339b8f961a0ef9d42ffcf8a 589 SUPERFAMILY SSF53743 2 353 7.98E-134 T 13-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 RPIT_11490 713651c67339b8f961a0ef9d42ffcf8a 589 Pfam PF07881 L-fucose isomerase, first N-terminal domain 4 172 1.7E-74 T 13-10-2018 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 RPIT_11490 713651c67339b8f961a0ef9d42ffcf8a 589 Gene3D G3DSA:3.20.14.10 339 589 3.2E-119 T 13-10-2018 IPR038393 L-fucose isomerase, domain 3 superfamily KEGG: 00051+5.3.1.25 RPIT_11490 713651c67339b8f961a0ef9d42ffcf8a 589 Pfam PF02952 L-fucose isomerase, C-terminal domain 388 552 2.6E-46 T 13-10-2018 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 RPIT_11490 713651c67339b8f961a0ef9d42ffcf8a 589 Hamap MF_01254 L-fucose isomerase [fucI]. 1 589 62.315 T 13-10-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 RPIT_03925 ba6fa4a10738973017bda6363c7743ad 400 SUPERFAMILY SSF53756 198 365 2.79E-14 T 13-10-2018 RPIT_03925 ba6fa4a10738973017bda6363c7743ad 400 Gene3D G3DSA:3.40.50.2000 214 375 2.2E-19 T 13-10-2018 RPIT_03925 ba6fa4a10738973017bda6363c7743ad 400 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 232 365 3.2E-7 T 13-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 RPIT_11905 e71b6525374965019bc57c21d12ccad8 316 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 11 308 1.1E-106 T 13-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 RPIT_11905 e71b6525374965019bc57c21d12ccad8 316 PIRSF PIRSF000102 3 315 3.7E-94 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RPIT_11905 e71b6525374965019bc57c21d12ccad8 316 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 149 309 6.3E-26 T 13-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 RPIT_11905 e71b6525374965019bc57c21d12ccad8 316 PRINTS PR00086 L-lactate dehydrogenase signature 144 162 1.0E-39 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RPIT_11905 e71b6525374965019bc57c21d12ccad8 316 PRINTS PR00086 L-lactate dehydrogenase signature 8 32 1.0E-39 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RPIT_11905 e71b6525374965019bc57c21d12ccad8 316 PRINTS PR00086 L-lactate dehydrogenase signature 120 140 1.0E-39 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RPIT_11905 e71b6525374965019bc57c21d12ccad8 316 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 1.0E-39 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RPIT_11905 e71b6525374965019bc57c21d12ccad8 316 PRINTS PR00086 L-lactate dehydrogenase signature 174 187 1.0E-39 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RPIT_11905 e71b6525374965019bc57c21d12ccad8 316 SUPERFAMILY SSF51735 5 146 6.48E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_11905 e71b6525374965019bc57c21d12ccad8 316 Gene3D G3DSA:3.90.110.10 149 316 7.0E-59 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RPIT_11905 e71b6525374965019bc57c21d12ccad8 316 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 146 9.9E-37 T 13-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 RPIT_11905 e71b6525374965019bc57c21d12ccad8 316 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 6 315 37.635 T 13-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 RPIT_11905 e71b6525374965019bc57c21d12ccad8 316 Gene3D G3DSA:3.40.50.720 1 148 2.5E-50 T 13-10-2018 RPIT_11905 e71b6525374965019bc57c21d12ccad8 316 SUPERFAMILY SSF56327 147 312 5.62E-52 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RPIT_01565 25cef16d259af4293679bc888b15dd87 679 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 113 603 3.2E-224 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 RPIT_01565 25cef16d259af4293679bc888b15dd87 679 Gene3D G3DSA:1.10.8.60 333 407 3.4E-28 T 13-10-2018 RPIT_01565 25cef16d259af4293679bc888b15dd87 679 SUPERFAMILY SSF140990 413 611 6.67E-69 T 13-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 RPIT_01565 25cef16d259af4293679bc888b15dd87 679 SUPERFAMILY SSF52540 155 403 2.79E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01565 25cef16d259af4293679bc888b15dd87 679 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 612 36.834 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 RPIT_01565 25cef16d259af4293679bc888b15dd87 679 ProSitePatterns PS00674 AAA-protein family signature. 302 320 - T 13-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 RPIT_01565 25cef16d259af4293679bc888b15dd87 679 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 199 331 3.8E-46 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RPIT_01565 25cef16d259af4293679bc888b15dd87 679 SMART SM00382 195 334 9.6E-25 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_01565 25cef16d259af4293679bc888b15dd87 679 Gene3D G3DSA:1.20.58.760 408 612 3.6E-69 T 13-10-2018 RPIT_01565 25cef16d259af4293679bc888b15dd87 679 Pfam PF01434 Peptidase family M41 395 602 3.5E-76 T 13-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 RPIT_01565 25cef16d259af4293679bc888b15dd87 679 Gene3D G3DSA:3.40.50.300 150 332 2.8E-68 T 13-10-2018 RPIT_07870 e116f5f9ec09e404a494c33079c4388a 319 Gene3D G3DSA:1.10.510.10 6 264 4.9E-50 T 13-10-2018 RPIT_07870 e116f5f9ec09e404a494c33079c4388a 319 Pfam PF00069 Protein kinase domain 11 208 2.6E-33 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RPIT_07870 e116f5f9ec09e404a494c33079c4388a 319 SMART SM00220 9 253 1.7E-35 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RPIT_07870 e116f5f9ec09e404a494c33079c4388a 319 SUPERFAMILY SSF56112 4 246 2.23E-56 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily RPIT_07870 e116f5f9ec09e404a494c33079c4388a 319 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 15 38 - T 13-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 RPIT_07870 e116f5f9ec09e404a494c33079c4388a 319 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 123 135 - T 13-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RPIT_04530 34b4a13530026fc87ac40cffa3906da0 238 PIRSF PIRSF000706 148 232 3.5E-27 T 13-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 RPIT_04530 34b4a13530026fc87ac40cffa3906da0 238 PIRSF PIRSF000706 17 143 2.6E-16 T 13-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 RPIT_04530 34b4a13530026fc87ac40cffa3906da0 238 Gene3D G3DSA:3.90.1200.10 143 232 2.9E-29 T 13-10-2018 RPIT_04530 34b4a13530026fc87ac40cffa3906da0 238 Gene3D G3DSA:3.30.200.20 20 98 1.6E-6 T 13-10-2018 RPIT_04530 34b4a13530026fc87ac40cffa3906da0 238 Pfam PF01636 Phosphotransferase enzyme family 155 227 1.3E-7 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase RPIT_04530 34b4a13530026fc87ac40cffa3906da0 238 SUPERFAMILY SSF56112 23 229 8.31E-29 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily RPIT_13785 88a0069fd0405e1755b8b8c08675da3f 497 Gene3D G3DSA:3.40.50.300 192 462 2.8E-60 T 13-10-2018 RPIT_13785 88a0069fd0405e1755b8b8c08675da3f 497 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 272 437 1.2E-9 T 13-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 RPIT_13785 88a0069fd0405e1755b8b8c08675da3f 497 SUPERFAMILY SSF52540 272 446 9.04E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_13470 75541214a887f64bd0b5d5b7e23ff0ee 300 Gene3D G3DSA:3.40.50.300 27 67 2.5E-30 T 13-10-2018 RPIT_13470 75541214a887f64bd0b5d5b7e23ff0ee 300 Pfam PF13604 AAA domain 29 102 2.2E-20 T 13-10-2018 RPIT_13470 75541214a887f64bd0b5d5b7e23ff0ee 300 SUPERFAMILY SSF52540 27 267 6.02E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_13470 75541214a887f64bd0b5d5b7e23ff0ee 300 Gene3D G3DSA:2.30.30.940 146 226 2.5E-30 T 13-10-2018 RPIT_13470 75541214a887f64bd0b5d5b7e23ff0ee 300 Gene3D G3DSA:3.40.50.300 68 265 2.5E-30 T 13-10-2018 RPIT_13470 75541214a887f64bd0b5d5b7e23ff0ee 300 Pfam PF13538 UvrD-like helicase C-terminal domain 226 264 9.2E-7 T 13-10-2018 IPR027785 UvrD-like helicase C-terminal domain RPIT_13560 001aa8e2b1f4c36f9afaa1ef8f1373dc 122 Pfam PF12823 Domain of unknown function (DUF3817) 24 110 9.2E-22 T 13-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane RPIT_13560 001aa8e2b1f4c36f9afaa1ef8f1373dc 122 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 26 108 4.6E-24 T 13-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane RPIT_04850 e6c932af3ea908f31c54b34e907ed637 140 SUPERFAMILY SSF55961 5 137 6.52E-30 T 13-10-2018 RPIT_04850 e6c932af3ea908f31c54b34e907ed637 140 Gene3D G3DSA:3.30.530.20 3 140 6.6E-38 T 13-10-2018 IPR023393 START-like domain superfamily RPIT_04850 e6c932af3ea908f31c54b34e907ed637 140 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 12 136 7.8E-22 T 13-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like RPIT_07505 33335738e85cfc1e533243c189303cd9 1178 Pfam PF00092 von Willebrand factor type A domain 628 788 1.2E-8 T 13-10-2018 IPR002035 von Willebrand factor, type A RPIT_07505 33335738e85cfc1e533243c189303cd9 1178 PRINTS PR00723 Subtilisin serine protease family (S8) signature 265 278 6.9E-15 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related RPIT_07505 33335738e85cfc1e533243c189303cd9 1178 PRINTS PR00723 Subtilisin serine protease family (S8) signature 219 238 6.9E-15 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related RPIT_07505 33335738e85cfc1e533243c189303cd9 1178 PRINTS PR00723 Subtilisin serine protease family (S8) signature 440 456 6.9E-15 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related RPIT_07505 33335738e85cfc1e533243c189303cd9 1178 Gene3D G3DSA:3.40.50.410 625 800 1.1E-23 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily RPIT_07505 33335738e85cfc1e533243c189303cd9 1178 SMART SM00327 625 810 1.5E-12 T 13-10-2018 IPR002035 von Willebrand factor, type A RPIT_07505 33335738e85cfc1e533243c189303cd9 1178 SUPERFAMILY SSF53300 622 792 2.83E-18 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily RPIT_07505 33335738e85cfc1e533243c189303cd9 1178 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 441 451 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site RPIT_07505 33335738e85cfc1e533243c189303cd9 1178 Gene3D G3DSA:3.40.50.200 175 510 8.9E-59 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 RPIT_07505 33335738e85cfc1e533243c189303cd9 1178 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 269 279 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site RPIT_07505 33335738e85cfc1e533243c189303cd9 1178 Pfam PF00082 Subtilase family 219 496 2.5E-22 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIT_07505 33335738e85cfc1e533243c189303cd9 1178 SUPERFAMILY SSF52743 205 507 3.53E-47 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 RPIT_11570 9fcb3be68d6f5aab6a3b41fc53ef3876 350 Pfam PF01595 Domain of unknown function DUF21 10 197 8.5E-36 T 13-10-2018 IPR002550 CNNM, transmembrane domain RPIT_11570 9fcb3be68d6f5aab6a3b41fc53ef3876 350 Gene3D G3DSA:3.90.1280.20 223 284 1.6E-17 T 13-10-2018 RPIT_11570 9fcb3be68d6f5aab6a3b41fc53ef3876 350 SMART SM00116 282 329 4.0 T 13-10-2018 IPR000644 CBS domain RPIT_11570 9fcb3be68d6f5aab6a3b41fc53ef3876 350 SMART SM00116 224 271 2.1 T 13-10-2018 IPR000644 CBS domain RPIT_11570 9fcb3be68d6f5aab6a3b41fc53ef3876 350 Pfam PF00571 CBS domain 280 325 0.0022 T 13-10-2018 IPR000644 CBS domain RPIT_11570 9fcb3be68d6f5aab6a3b41fc53ef3876 350 SUPERFAMILY SSF54631 210 330 1.05E-17 T 13-10-2018 RPIT_11570 9fcb3be68d6f5aab6a3b41fc53ef3876 350 Gene3D G3DSA:3.10.580.10 185 325 1.6E-17 T 13-10-2018 RPIT_06330 c330eb5963970b277453910682af8965 172 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 114 149 - T 13-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 RPIT_06330 c330eb5963970b277453910682af8965 172 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 4.0E-34 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIT_06330 c330eb5963970b277453910682af8965 172 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 152 1.7E-49 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIT_06330 c330eb5963970b277453910682af8965 172 SUPERFAMILY SSF53098 1 157 1.21E-41 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily RPIT_06330 c330eb5963970b277453910682af8965 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 84 100 5.9E-35 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIT_06330 c330eb5963970b277453910682af8965 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 108 127 5.9E-35 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIT_06330 c330eb5963970b277453910682af8965 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 62 78 5.9E-35 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIT_06330 c330eb5963970b277453910682af8965 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 140 152 5.9E-35 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIT_06330 c330eb5963970b277453910682af8965 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 5.9E-35 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIT_06330 c330eb5963970b277453910682af8965 172 Gene3D G3DSA:3.30.420.10 1 160 2.6E-43 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 RPIT_06330 c330eb5963970b277453910682af8965 172 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 155 41.787 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIT_04555 fc427713c42bcd71f910e47b33a88a15 591 Gene3D G3DSA:3.40.50.800 6 574 2.1E-209 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily RPIT_04555 fc427713c42bcd71f910e47b33a88a15 591 Gene3D G3DSA:3.30.930.10 13 487 2.1E-209 T 13-10-2018 RPIT_04555 fc427713c42bcd71f910e47b33a88a15 591 SUPERFAMILY SSF52954 485 587 6.34E-27 T 13-10-2018 RPIT_04555 fc427713c42bcd71f910e47b33a88a15 591 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 5 583 2.4E-174 T 13-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIT_04555 fc427713c42bcd71f910e47b33a88a15 591 PRINTS PR01046 Prolyl-tRNA synthetase signature 106 117 9.6E-17 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 RPIT_04555 fc427713c42bcd71f910e47b33a88a15 591 PRINTS PR01046 Prolyl-tRNA synthetase signature 146 157 9.6E-17 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 RPIT_04555 fc427713c42bcd71f910e47b33a88a15 591 PRINTS PR01046 Prolyl-tRNA synthetase signature 70 88 9.6E-17 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 RPIT_04555 fc427713c42bcd71f910e47b33a88a15 591 PRINTS PR01046 Prolyl-tRNA synthetase signature 136 144 9.6E-17 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 RPIT_04555 fc427713c42bcd71f910e47b33a88a15 591 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 96 479 4.8E-44 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_04555 fc427713c42bcd71f910e47b33a88a15 591 Gene3D G3DSA:3.90.960.10 241 411 2.1E-209 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 RPIT_04555 fc427713c42bcd71f910e47b33a88a15 591 Hamap MF_01569 Proline--tRNA ligase [proS]. 3 590 36.532 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIT_04555 fc427713c42bcd71f910e47b33a88a15 591 SUPERFAMILY SSF55681 12 499 5.74E-90 T 13-10-2018 RPIT_04555 fc427713c42bcd71f910e47b33a88a15 591 SUPERFAMILY SSF55826 245 409 2.09E-11 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 RPIT_04555 fc427713c42bcd71f910e47b33a88a15 591 Pfam PF04073 Aminoacyl-tRNA editing domain 258 400 3.2E-18 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIT_04555 fc427713c42bcd71f910e47b33a88a15 591 Pfam PF03129 Anticodon binding domain 498 586 6.7E-16 T 13-10-2018 IPR004154 Anticodon-binding RPIT_11995 bdd3777e3447a4e9c083d02b511d6ada 249 Gene3D G3DSA:3.40.50.300 1 236 9.7E-55 T 13-10-2018 RPIT_11995 bdd3777e3447a4e9c083d02b511d6ada 249 SMART SM00382 30 220 4.9E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_11995 bdd3777e3447a4e9c083d02b511d6ada 249 SUPERFAMILY SSF52540 3 230 1.81E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_11995 bdd3777e3447a4e9c083d02b511d6ada 249 Pfam PF00005 ABC transporter 23 172 5.0E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_11995 bdd3777e3447a4e9c083d02b511d6ada 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_05585 01a0bc31700f5cad1893a2ba483ad3c1 185 Pfam PF00665 Integrase core domain 31 135 5.7E-8 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 RPIT_05585 01a0bc31700f5cad1893a2ba483ad3c1 185 SUPERFAMILY SSF53098 31 176 1.33E-20 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily RPIT_00325 965dbbd787a1a29db68f591a3c472a6a 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 1.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_00325 965dbbd787a1a29db68f591a3c472a6a 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 1.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_00325 965dbbd787a1a29db68f591a3c472a6a 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 394 1.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_00325 965dbbd787a1a29db68f591a3c472a6a 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 436 1.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_00325 965dbbd787a1a29db68f591a3c472a6a 445 SMART SM00304 170 222 1.6E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 RPIT_00325 965dbbd787a1a29db68f591a3c472a6a 445 Gene3D G3DSA:1.10.287.130 174 293 3.5E-24 T 13-10-2018 RPIT_00325 965dbbd787a1a29db68f591a3c472a6a 445 SUPERFAMILY SSF47384 206 291 1.86E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 RPIT_00325 965dbbd787a1a29db68f591a3c472a6a 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 437 1.0E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_00325 965dbbd787a1a29db68f591a3c472a6a 445 SMART SM00388 223 293 1.7E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIT_00325 965dbbd787a1a29db68f591a3c472a6a 445 Pfam PF00672 HAMP domain 172 218 8.2E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 RPIT_00325 965dbbd787a1a29db68f591a3c472a6a 445 SUPERFAMILY SSF158472 172 219 2.09E-6 T 13-10-2018 RPIT_00325 965dbbd787a1a29db68f591a3c472a6a 445 SMART SM00387 333 439 8.3E-39 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_00325 965dbbd787a1a29db68f591a3c472a6a 445 Gene3D G3DSA:3.30.565.10 296 441 3.2E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_00325 965dbbd787a1a29db68f591a3c472a6a 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 292 1.2E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIT_00325 965dbbd787a1a29db68f591a3c472a6a 445 SUPERFAMILY SSF55874 293 438 7.99E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_08330 a9cdadc9f0ca4f4f07ea95d0a35f5e8b 274 Pfam PF02673 Bacitracin resistance protein BacA 6 261 2.3E-84 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RPIT_08330 a9cdadc9f0ca4f4f07ea95d0a35f5e8b 274 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 267 17.692 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RPIT_08330 a9cdadc9f0ca4f4f07ea95d0a35f5e8b 274 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 260 9.8E-84 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RPIT_04620 754e06a039722c78d688cf76ea06268c 175 SUPERFAMILY SSF46689 4 72 6.16E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_04620 754e06a039722c78d688cf76ea06268c 175 SUPERFAMILY SSF48498 85 173 8.24E-21 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RPIT_04620 754e06a039722c78d688cf76ea06268c 175 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 2.5E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_04620 754e06a039722c78d688cf76ea06268c 175 Gene3D G3DSA:1.10.357.10 1 175 8.5E-39 T 13-10-2018 RPIT_04620 754e06a039722c78d688cf76ea06268c 175 Pfam PF13305 WHG domain 88 170 6.9E-16 T 13-10-2018 IPR025996 WHG domain RPIT_10745 bd7e48021b104e5e5874bb856577622c 507 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 428 456 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RPIT_10745 bd7e48021b104e5e5874bb856577622c 507 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 28 478 4.7E-168 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 RPIT_10745 bd7e48021b104e5e5874bb856577622c 507 SUPERFAMILY SSF51161 274 484 1.7E-45 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily RPIT_10745 bd7e48021b104e5e5874bb856577622c 507 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 26 477 39.003 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 RPIT_10745 bd7e48021b104e5e5874bb856577622c 507 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 419 453 1.4E-5 T 13-10-2018 IPR001451 Hexapeptide repeat RPIT_10745 bd7e48021b104e5e5874bb856577622c 507 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 343 374 2.0E-5 T 13-10-2018 IPR001451 Hexapeptide repeat RPIT_10745 bd7e48021b104e5e5874bb856577622c 507 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 296 324 0.0011 T 13-10-2018 IPR001451 Hexapeptide repeat RPIT_10745 bd7e48021b104e5e5874bb856577622c 507 Gene3D G3DSA:3.90.550.10 27 253 1.8E-63 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_10745 bd7e48021b104e5e5874bb856577622c 507 Pfam PF12804 MobA-like NTP transferase domain 29 185 2.8E-24 T 13-10-2018 IPR025877 MobA-like NTP transferase RPIT_10745 bd7e48021b104e5e5874bb856577622c 507 Gene3D G3DSA:2.160.10.10 254 481 6.1E-57 T 13-10-2018 RPIT_10745 bd7e48021b104e5e5874bb856577622c 507 SUPERFAMILY SSF53448 28 278 4.12E-60 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_09955 e5ee12699731892fedc86e0a20973e09 501 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 14 487 2.9E-157 T 13-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 RPIT_09955 e5ee12699731892fedc86e0a20973e09 501 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 14 500 83.225 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 RPIT_09955 e5ee12699731892fedc86e0a20973e09 501 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 14 468 5.1E-180 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 RPIT_09955 e5ee12699731892fedc86e0a20973e09 501 SMART SM00116 102 150 1.1E-8 T 13-10-2018 IPR000644 CBS domain RPIT_09955 e5ee12699731892fedc86e0a20973e09 501 SMART SM00116 163 211 4.4E-9 T 13-10-2018 IPR000644 CBS domain RPIT_09955 e5ee12699731892fedc86e0a20973e09 501 Gene3D G3DSA:3.20.20.70 8 500 2.3E-210 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_09955 e5ee12699731892fedc86e0a20973e09 501 SUPERFAMILY SSF51412 10 491 3.27E-118 T 13-10-2018 RPIT_09955 e5ee12699731892fedc86e0a20973e09 501 Pfam PF00571 CBS domain 99 146 6.4E-8 T 13-10-2018 IPR000644 CBS domain RPIT_09955 e5ee12699731892fedc86e0a20973e09 501 Pfam PF00571 CBS domain 155 210 7.8E-11 T 13-10-2018 IPR000644 CBS domain RPIT_09955 e5ee12699731892fedc86e0a20973e09 501 PIRSF PIRSF000130 7 501 6.9E-202 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 RPIT_09955 e5ee12699731892fedc86e0a20973e09 501 SMART SM01240 13 487 0.0 T 13-10-2018 RPIT_09955 e5ee12699731892fedc86e0a20973e09 501 SUPERFAMILY SSF54631 90 209 6.47E-31 T 13-10-2018 RPIT_09955 e5ee12699731892fedc86e0a20973e09 501 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 302 314 - T 13-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 RPIT_12160 8be22bff1a9ecebe512b3f3345298fbd 67 SUPERFAMILY SSF64307 2 66 1.24E-18 T 13-10-2018 IPR036868 TusA-like domain superfamily RPIT_12160 8be22bff1a9ecebe512b3f3345298fbd 67 Pfam PF01206 Sulfurtransferase TusA 2 66 6.3E-15 T 13-10-2018 IPR001455 TusA-like domain RPIT_12160 8be22bff1a9ecebe512b3f3345298fbd 67 Gene3D G3DSA:3.30.110.40 1 66 9.0E-18 T 13-10-2018 IPR036868 TusA-like domain superfamily RPIT_03810 eb4840164a0215c1f53597b7f68d01d9 686 Gene3D G3DSA:3.30.10.20 490 557 3.2E-14 T 13-10-2018 RPIT_03810 eb4840164a0215c1f53597b7f68d01d9 686 Gene3D G3DSA:3.30.10.20 422 489 2.5E-14 T 13-10-2018 RPIT_03810 eb4840164a0215c1f53597b7f68d01d9 686 SMART SM00740 555 620 2.2E-4 T 13-10-2018 IPR005543 PASTA domain RPIT_03810 eb4840164a0215c1f53597b7f68d01d9 686 SMART SM00740 487 554 1.8E-5 T 13-10-2018 IPR005543 PASTA domain RPIT_03810 eb4840164a0215c1f53597b7f68d01d9 686 SMART SM00740 420 486 3.7E-10 T 13-10-2018 IPR005543 PASTA domain RPIT_03810 eb4840164a0215c1f53597b7f68d01d9 686 SMART SM00740 621 686 1.4E-4 T 13-10-2018 IPR005543 PASTA domain RPIT_03810 eb4840164a0215c1f53597b7f68d01d9 686 SUPERFAMILY SSF56112 14 336 1.32E-72 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily RPIT_03810 eb4840164a0215c1f53597b7f68d01d9 686 Gene3D G3DSA:3.30.10.20 559 621 3.1E-11 T 13-10-2018 RPIT_03810 eb4840164a0215c1f53597b7f68d01d9 686 SMART SM00220 17 289 4.0E-58 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RPIT_03810 eb4840164a0215c1f53597b7f68d01d9 686 Gene3D G3DSA:3.30.200.20 6 96 1.1E-31 T 13-10-2018 RPIT_03810 eb4840164a0215c1f53597b7f68d01d9 686 Pfam PF03793 PASTA domain 560 616 3.1E-7 T 13-10-2018 IPR005543 PASTA domain RPIT_03810 eb4840164a0215c1f53597b7f68d01d9 686 Pfam PF03793 PASTA domain 625 685 1.4E-8 T 13-10-2018 IPR005543 PASTA domain RPIT_03810 eb4840164a0215c1f53597b7f68d01d9 686 Pfam PF03793 PASTA domain 493 554 1.2E-7 T 13-10-2018 IPR005543 PASTA domain RPIT_03810 eb4840164a0215c1f53597b7f68d01d9 686 Pfam PF03793 PASTA domain 425 485 4.2E-11 T 13-10-2018 IPR005543 PASTA domain RPIT_03810 eb4840164a0215c1f53597b7f68d01d9 686 Gene3D G3DSA:1.10.510.10 98 290 1.1E-47 T 13-10-2018 RPIT_03810 eb4840164a0215c1f53597b7f68d01d9 686 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 136 148 - T 13-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RPIT_03810 eb4840164a0215c1f53597b7f68d01d9 686 Pfam PF00069 Protein kinase domain 17 231 4.7E-49 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RPIT_03810 eb4840164a0215c1f53597b7f68d01d9 686 Gene3D G3DSA:3.30.10.20 622 686 5.3E-11 T 13-10-2018 RPIT_10110 1ca4cda1d91193a3597c42caa5ffce46 217 Gene3D G3DSA:3.40.50.150 5 204 5.1E-40 T 13-10-2018 RPIT_10110 1ca4cda1d91193a3597c42caa5ffce46 217 Pfam PF13649 Methyltransferase domain 38 132 1.2E-9 T 13-10-2018 RPIT_10110 1ca4cda1d91193a3597c42caa5ffce46 217 SUPERFAMILY SSF53335 2 180 4.66E-30 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_09405 411c64951222f1beee7e31d21f53e2fe 109 Pfam PF12277 Protein of unknown function (DUF3618) 3 48 1.9E-7 T 13-10-2018 IPR022062 Protein of unknown function DUF3618 RPIT_11550 a0278f79bb9c3b6872f181bae5af500a 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 872 884 4.8E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_11550 a0278f79bb9c3b6872f181bae5af500a 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 856 872 4.8E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_11550 a0278f79bb9c3b6872f181bae5af500a 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 842 856 4.8E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_11550 a0278f79bb9c3b6872f181bae5af500a 901 SUPERFAMILY SSF46894 834 893 2.07E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIT_11550 a0278f79bb9c3b6872f181bae5af500a 901 SUPERFAMILY SSF52540 2 202 8.79E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_11550 a0278f79bb9c3b6872f181bae5af500a 901 SMART SM00421 839 896 1.9E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_11550 a0278f79bb9c3b6872f181bae5af500a 901 Gene3D G3DSA:1.10.10.10 790 900 5.3E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_11550 a0278f79bb9c3b6872f181bae5af500a 901 Pfam PF00196 Bacterial regulatory proteins, luxR family 841 892 4.5E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_06095 91ccdd1544590d097c3dd70340dd5b20 214 TIGRFAM TIGR00017 cmk: cytidylate kinase 1 211 1.1E-45 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 RPIT_06095 91ccdd1544590d097c3dd70340dd5b20 214 Gene3D G3DSA:3.40.50.300 1 214 2.2E-64 T 13-10-2018 RPIT_06095 91ccdd1544590d097c3dd70340dd5b20 214 Hamap MF_00238 Cytidylate kinase [cmk]. 1 213 24.696 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 RPIT_06095 91ccdd1544590d097c3dd70340dd5b20 214 Pfam PF02224 Cytidylate kinase 3 212 3.6E-51 T 13-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 RPIT_06095 91ccdd1544590d097c3dd70340dd5b20 214 SUPERFAMILY SSF52540 1 213 6.13E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_03700 6081310b074aa47cf471dd65039e7dad 486 PIRSF PIRSF000130 3 486 2.7E-140 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 RPIT_03700 6081310b074aa47cf471dd65039e7dad 486 Pfam PF00571 CBS domain 149 198 0.0013 T 13-10-2018 IPR000644 CBS domain RPIT_03700 6081310b074aa47cf471dd65039e7dad 486 Pfam PF00571 CBS domain 99 140 1.1E-5 T 13-10-2018 IPR000644 CBS domain RPIT_03700 6081310b074aa47cf471dd65039e7dad 486 SUPERFAMILY SSF51412 12 482 2.35E-85 T 13-10-2018 RPIT_03700 6081310b074aa47cf471dd65039e7dad 486 SMART SM01240 10 482 3.3E-164 T 13-10-2018 RPIT_03700 6081310b074aa47cf471dd65039e7dad 486 TIGRFAM TIGR01303 IMP_DH_rel_1: IMP dehydrogenase family protein 2 483 5.2E-219 T 13-10-2018 IPR005991 IMP dehydrogenase-related 1 RPIT_03700 6081310b074aa47cf471dd65039e7dad 486 Gene3D G3DSA:3.20.20.70 8 485 1.9E-130 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_03700 6081310b074aa47cf471dd65039e7dad 486 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 12 481 6.7E-96 T 13-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 RPIT_03700 6081310b074aa47cf471dd65039e7dad 486 SUPERFAMILY SSF54631 98 201 2.15E-17 T 13-10-2018 RPIT_00900 06b97905bb530abd468da44a5966f9bd 391 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 143 208 1.2E-5 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 RPIT_00900 06b97905bb530abd468da44a5966f9bd 391 SUPERFAMILY SSF55347 136 306 1.08E-25 T 13-10-2018 RPIT_00900 06b97905bb530abd468da44a5966f9bd 391 SUPERFAMILY SSF51735 3 161 2.29E-42 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_00900 06b97905bb530abd468da44a5966f9bd 391 Gene3D G3DSA:3.40.50.720 1 134 2.3E-31 T 13-10-2018 RPIT_00900 06b97905bb530abd468da44a5966f9bd 391 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 129 2.7E-24 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 RPIT_00900 06b97905bb530abd468da44a5966f9bd 391 Gene3D G3DSA:3.30.360.10 136 391 6.0E-50 T 13-10-2018 RPIT_06525 ad9f687def8fdfc5df251ad73b0e5f72 298 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 95 289 7.9E-9 T 13-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RPIT_06525 ad9f687def8fdfc5df251ad73b0e5f72 298 Gene3D G3DSA:3.20.20.210 22 295 6.5E-26 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 RPIT_06525 ad9f687def8fdfc5df251ad73b0e5f72 298 SUPERFAMILY SSF51726 42 289 2.88E-25 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 Gene3D G3DSA:3.40.50.620 40 584 8.4E-255 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 Pfam PF09334 tRNA synthetases class I (M) 45 186 1.3E-21 T 13-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 Gene3D G3DSA:3.90.740.10 234 423 8.4E-255 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 227 411 5.8E-63 T 13-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 13 584 1.5E-244 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 Pfam PF08264 Anticodon-binding domain of tRNA 663 784 5.5E-11 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 PRINTS PR00985 Leucyl-tRNA synthetase signature 537 559 6.9E-49 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 PRINTS PR00985 Leucyl-tRNA synthetase signature 570 580 6.9E-49 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 PRINTS PR00985 Leucyl-tRNA synthetase signature 221 240 6.9E-49 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 PRINTS PR00985 Leucyl-tRNA synthetase signature 498 516 6.9E-49 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 PRINTS PR00985 Leucyl-tRNA synthetase signature 190 203 6.9E-49 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 PRINTS PR00985 Leucyl-tRNA synthetase signature 158 174 6.9E-49 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 PRINTS PR00985 Leucyl-tRNA synthetase signature 132 149 6.9E-49 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 Gene3D G3DSA:1.10.730.10 609 758 1.4E-29 T 13-10-2018 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 426 627 1.4E-15 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 SUPERFAMILY SSF47323 637 812 2.99E-22 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 SUPERFAMILY SSF50677 232 422 2.72E-50 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 SUPERFAMILY SSF52374 10 627 3.52E-136 T 13-10-2018 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 58 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 9 822 21.425 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RPIT_04825 d310358b55d15b7a060646e4fe8296e0 823 Gene3D G3DSA:3.10.20.590 762 822 4.1E-14 T 13-10-2018 RPIT_09950 7253f2fb834191cb91a4637d14e83f1c 366 Gene3D G3DSA:3.20.20.70 13 365 7.4E-91 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_09950 7253f2fb834191cb91a4637d14e83f1c 366 SUPERFAMILY SSF51412 9 364 1.96E-69 T 13-10-2018 RPIT_09950 7253f2fb834191cb91a4637d14e83f1c 366 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 13 295 2.9E-40 T 13-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 RPIT_09950 7253f2fb834191cb91a4637d14e83f1c 366 SMART SM01240 12 366 3.8E-20 T 13-10-2018 RPIT_09950 7253f2fb834191cb91a4637d14e83f1c 366 TIGRFAM TIGR01304 IMP_DH_rel_2: IMP dehydrogenase family protein 3 364 6.1E-161 T 13-10-2018 IPR005992 IMP dehydrogenase-related 2 GO:0016491|GO:0055114 RPIT_12370 97bbf1f8139fccd33af75dc6757ea7ad 201 Gene3D G3DSA:3.40.630.30 62 199 2.2E-8 T 13-10-2018 RPIT_12370 97bbf1f8139fccd33af75dc6757ea7ad 201 Pfam PF10688 Bacterial inner membrane protein 2 67 2.1E-5 T 13-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV RPIT_12370 97bbf1f8139fccd33af75dc6757ea7ad 201 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 1 57 6.0E-9 T 13-10-2018 IPR020137 Uncharacterised protein family HI1736 RPIT_12370 97bbf1f8139fccd33af75dc6757ea7ad 201 SUPERFAMILY SSF55729 98 195 2.98E-10 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_06740 aabf2ef24776ce455d64cb860e6eff3f 296 Pfam PF00288 GHMP kinases N terminal domain 81 144 6.1E-10 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 RPIT_06740 aabf2ef24776ce455d64cb860e6eff3f 296 TIGRFAM TIGR00191 thrB: homoserine kinase 4 262 9.3E-56 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 RPIT_06740 aabf2ef24776ce455d64cb860e6eff3f 296 Hamap MF_00384 Homoserine kinase [thrB]. 6 293 26.433 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 RPIT_06740 aabf2ef24776ce455d64cb860e6eff3f 296 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 88 99 - T 13-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 RPIT_06740 aabf2ef24776ce455d64cb860e6eff3f 296 Gene3D G3DSA:3.30.70.890 163 263 1.8E-75 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily RPIT_06740 aabf2ef24776ce455d64cb860e6eff3f 296 PRINTS PR00958 Homoserine kinase signature 95 110 2.9E-34 T 13-10-2018 RPIT_06740 aabf2ef24776ce455d64cb860e6eff3f 296 PRINTS PR00958 Homoserine kinase signature 131 144 2.9E-34 T 13-10-2018 RPIT_06740 aabf2ef24776ce455d64cb860e6eff3f 296 PRINTS PR00958 Homoserine kinase signature 247 262 2.9E-34 T 13-10-2018 RPIT_06740 aabf2ef24776ce455d64cb860e6eff3f 296 PRINTS PR00958 Homoserine kinase signature 170 187 2.9E-34 T 13-10-2018 RPIT_06740 aabf2ef24776ce455d64cb860e6eff3f 296 PRINTS PR00958 Homoserine kinase signature 11 26 2.9E-34 T 13-10-2018 RPIT_06740 aabf2ef24776ce455d64cb860e6eff3f 296 PIRSF PIRSF000676 1 273 2.1E-68 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 RPIT_06740 aabf2ef24776ce455d64cb860e6eff3f 296 Gene3D G3DSA:3.30.230.10 6 162 1.8E-75 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIT_06740 aabf2ef24776ce455d64cb860e6eff3f 296 SUPERFAMILY SSF54211 4 158 4.33E-26 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RPIT_06740 aabf2ef24776ce455d64cb860e6eff3f 296 SUPERFAMILY SSF55060 166 262 7.91E-18 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily RPIT_10260 9429d8c38e910e40088804792aca68da 105 Pfam PF00037 4Fe-4S binding domain 34 56 1.2E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIT_10260 9429d8c38e910e40088804792aca68da 105 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIT_10260 9429d8c38e910e40088804792aca68da 105 Gene3D G3DSA:3.30.70.20 2 105 2.9E-44 T 13-10-2018 RPIT_10260 9429d8c38e910e40088804792aca68da 105 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.5E-17 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 RPIT_10260 9429d8c38e910e40088804792aca68da 105 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.5E-17 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 RPIT_10260 9429d8c38e910e40088804792aca68da 105 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.5E-17 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 RPIT_10260 9429d8c38e910e40088804792aca68da 105 SUPERFAMILY SSF54862 3 96 2.87E-21 T 13-10-2018 RPIT_01910 14a424640f195916942b37174dbe2722 363 Pfam PF02371 Transposase IS116/IS110/IS902 family 248 323 1.2E-13 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RPIT_01910 14a424640f195916942b37174dbe2722 363 Pfam PF01548 Transposase 20 164 1.0E-16 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RPIT_07220 14a424640f195916942b37174dbe2722 363 Pfam PF02371 Transposase IS116/IS110/IS902 family 248 323 1.2E-13 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RPIT_07220 14a424640f195916942b37174dbe2722 363 Pfam PF01548 Transposase 20 164 1.0E-16 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RPIT_02020 14a424640f195916942b37174dbe2722 363 Pfam PF02371 Transposase IS116/IS110/IS902 family 248 323 1.2E-13 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RPIT_02020 14a424640f195916942b37174dbe2722 363 Pfam PF01548 Transposase 20 164 1.0E-16 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RPIT_12560 e721fefacb04c9727c9de443def22ab8 368 SUPERFAMILY SSF110738 2 368 1.7E-88 T 13-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 RPIT_12560 e721fefacb04c9727c9de443def22ab8 368 Pfam PF02595 Glycerate kinase family 3 368 5.4E-106 T 13-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RPIT_12560 e721fefacb04c9727c9de443def22ab8 368 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 3 330 1.1E-87 T 13-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RPIT_12560 e721fefacb04c9727c9de443def22ab8 368 PIRSF PIRSF006078 1 368 3.2E-96 T 13-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RPIT_12560 e721fefacb04c9727c9de443def22ab8 368 Gene3D G3DSA:3.40.50.10350 1 328 1.6E-98 T 13-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold RPIT_12560 e721fefacb04c9727c9de443def22ab8 368 Gene3D G3DSA:3.90.1510.10 42 274 1.6E-98 T 13-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 RPIT_02650 71ffbbba646aa2955fc93d56c364443f 247 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 34 175 3.3E-47 T 13-10-2018 RPIT_02650 71ffbbba646aa2955fc93d56c364443f 247 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 34 175 4.4E-44 T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02650 71ffbbba646aa2955fc93d56c364443f 247 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 133 151 - T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02650 71ffbbba646aa2955fc93d56c364443f 247 SUPERFAMILY SSF52833 25 181 4.14E-48 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_02650 71ffbbba646aa2955fc93d56c364443f 247 Gene3D G3DSA:3.40.30.10 94 195 6.1E-25 T 13-10-2018 RPIT_02650 71ffbbba646aa2955fc93d56c364443f 247 PIRSF PIRSF000216 9 235 1.0E-69 T 13-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02650 71ffbbba646aa2955fc93d56c364443f 247 Gene3D G3DSA:1.10.10.1590 23 93 2.3E-21 T 13-10-2018 RPIT_11290 a2c6bd440c343045b9244832e18c3e17 160 Gene3D G3DSA:3.30.1330.50 1 158 5.4E-57 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 RPIT_11290 a2c6bd440c343045b9244832e18c3e17 160 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 154 31.897 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 RPIT_11290 a2c6bd440c343045b9244832e18c3e17 160 SUPERFAMILY SSF69765 1 153 8.11E-49 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 RPIT_11290 a2c6bd440c343045b9244832e18c3e17 160 Pfam PF02542 YgbB family 1 152 4.1E-48 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 RPIT_11290 a2c6bd440c343045b9244832e18c3e17 160 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 13-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 RPIT_11290 a2c6bd440c343045b9244832e18c3e17 160 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 153 4.1E-48 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 RPIT_11415 71ab2a6abbf1cfb0c1363138be85d471 356 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 288 3.2E-47 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RPIT_11415 71ab2a6abbf1cfb0c1363138be85d471 356 Gene3D G3DSA:3.40.50.720 97 293 3.2E-74 T 13-10-2018 RPIT_11415 71ab2a6abbf1cfb0c1363138be85d471 356 SUPERFAMILY SSF51735 98 289 2.49E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_11415 71ab2a6abbf1cfb0c1363138be85d471 356 Gene3D G3DSA:3.40.50.720 22 311 3.2E-74 T 13-10-2018 RPIT_11415 71ab2a6abbf1cfb0c1363138be85d471 356 SUPERFAMILY SSF52283 25 127 1.5E-8 T 13-10-2018 RPIT_00415 074f2e0d54a79780639a22016bdd2a69 300 PIRSF PIRSF001500 1 273 6.8E-59 T 13-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 RPIT_00415 074f2e0d54a79780639a22016bdd2a69 300 Gene3D G3DSA:3.40.190.10 1 85 2.0E-25 T 13-10-2018 RPIT_00415 074f2e0d54a79780639a22016bdd2a69 300 Pfam PF01842 ACT domain 194 256 7.6E-8 T 13-10-2018 IPR002912 ACT domain RPIT_00415 074f2e0d54a79780639a22016bdd2a69 300 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 154 176 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 RPIT_00415 074f2e0d54a79780639a22016bdd2a69 300 Gene3D G3DSA:3.40.190.10 86 168 3.6E-27 T 13-10-2018 RPIT_00415 074f2e0d54a79780639a22016bdd2a69 300 Gene3D G3DSA:3.30.70.260 181 278 1.9E-33 T 13-10-2018 RPIT_00415 074f2e0d54a79780639a22016bdd2a69 300 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 219 226 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 RPIT_00415 074f2e0d54a79780639a22016bdd2a69 300 SUPERFAMILY SSF55021 179 271 3.48E-25 T 13-10-2018 RPIT_00415 074f2e0d54a79780639a22016bdd2a69 300 Pfam PF00800 Prephenate dehydratase 3 176 4.9E-47 T 13-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 RPIT_00415 074f2e0d54a79780639a22016bdd2a69 300 SUPERFAMILY SSF53850 3 182 9.23E-43 T 13-10-2018 RPIT_00885 2c28126cd39f66dc85534d4621e2c418 308 Pfam PF01522 Polysaccharide deacetylase 108 240 5.4E-14 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIT_00885 2c28126cd39f66dc85534d4621e2c418 308 SUPERFAMILY SSF88713 111 307 3.95E-26 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIT_00885 2c28126cd39f66dc85534d4621e2c418 308 Gene3D G3DSA:3.20.20.370 104 308 4.0E-23 T 13-10-2018 RPIT_05970 efc258a057909c64dbb7ac2d924423d5 256 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 18 241 1.5E-40 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RPIT_05970 efc258a057909c64dbb7ac2d924423d5 256 Gene3D G3DSA:3.20.20.190 16 252 3.6E-69 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 RPIT_05970 efc258a057909c64dbb7ac2d924423d5 256 SUPERFAMILY SSF51695 13 247 4.19E-66 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 RPIT_02705 49b8bda92aa942e683397fd3d62d0439 649 Pfam PF01431 Peptidase family M13 443 646 5.2E-69 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 RPIT_02705 49b8bda92aa942e683397fd3d62d0439 649 SUPERFAMILY SSF55486 7 649 2.49E-209 T 13-10-2018 RPIT_02705 49b8bda92aa942e683397fd3d62d0439 649 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 547 558 5.3E-21 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 RPIT_02705 49b8bda92aa942e683397fd3d62d0439 649 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 435 447 5.3E-21 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 RPIT_02705 49b8bda92aa942e683397fd3d62d0439 649 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 453 465 5.3E-21 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 RPIT_02705 49b8bda92aa942e683397fd3d62d0439 649 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 474 490 5.3E-21 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 RPIT_02705 49b8bda92aa942e683397fd3d62d0439 649 Gene3D G3DSA:3.40.390.10 10 649 8.7E-237 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 RPIT_02705 49b8bda92aa942e683397fd3d62d0439 649 Pfam PF05649 Peptidase family M13 15 391 4.2E-100 T 13-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 RPIT_02705 49b8bda92aa942e683397fd3d62d0439 649 Gene3D G3DSA:1.10.1380.10 41 430 8.7E-237 T 13-10-2018 RPIT_02820 958c08b28a0d5624406b61cf4bd69a32 350 SUPERFAMILY SSF47090 221 284 2.35E-16 T 13-10-2018 IPR036365 PGBD-like superfamily RPIT_02820 958c08b28a0d5624406b61cf4bd69a32 350 Gene3D G3DSA:1.10.101.10 287 350 1.0E-16 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 RPIT_02820 958c08b28a0d5624406b61cf4bd69a32 350 SMART SM00047 22 191 4.6E-22 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RPIT_02820 958c08b28a0d5624406b61cf4bd69a32 350 Gene3D G3DSA:1.10.101.10 215 286 6.8E-18 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 RPIT_02820 958c08b28a0d5624406b61cf4bd69a32 350 Gene3D G3DSA:1.10.530.10 29 185 4.4E-38 T 13-10-2018 RPIT_02820 958c08b28a0d5624406b61cf4bd69a32 350 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 41 186 2.5E-16 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RPIT_02820 958c08b28a0d5624406b61cf4bd69a32 350 Pfam PF01471 Putative peptidoglycan binding domain 230 284 1.7E-12 T 13-10-2018 IPR002477 Peptidoglycan binding-like RPIT_02820 958c08b28a0d5624406b61cf4bd69a32 350 Pfam PF01471 Putative peptidoglycan binding domain 293 348 5.7E-12 T 13-10-2018 IPR002477 Peptidoglycan binding-like RPIT_02820 958c08b28a0d5624406b61cf4bd69a32 350 SUPERFAMILY SSF47090 286 348 2.04E-15 T 13-10-2018 IPR036365 PGBD-like superfamily RPIT_00495 dfcbbe6dd5b3ea0c31b133ad3baa2ffa 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 2.0E-8 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_00495 dfcbbe6dd5b3ea0c31b133ad3baa2ffa 388 SUPERFAMILY SSF51735 1 194 3.96E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_00495 dfcbbe6dd5b3ea0c31b133ad3baa2ffa 388 PIRSF PIRSF000124 1 388 1.7E-122 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RPIT_00495 dfcbbe6dd5b3ea0c31b133ad3baa2ffa 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 167 2.9E-30 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_00495 dfcbbe6dd5b3ea0c31b133ad3baa2ffa 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 376 2.0E-99 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RPIT_00495 dfcbbe6dd5b3ea0c31b133ad3baa2ffa 388 SUPERFAMILY SSF52413 283 387 6.54E-24 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 RPIT_00495 dfcbbe6dd5b3ea0c31b133ad3baa2ffa 388 SUPERFAMILY SSF48179 192 286 9.52E-30 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 RPIT_00495 dfcbbe6dd5b3ea0c31b133ad3baa2ffa 388 Gene3D G3DSA:1.20.5.100 194 220 8.8E-18 T 13-10-2018 RPIT_00495 dfcbbe6dd5b3ea0c31b133ad3baa2ffa 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 3.1E-26 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_00495 dfcbbe6dd5b3ea0c31b133ad3baa2ffa 388 Gene3D G3DSA:3.40.50.720 1 193 3.1E-55 T 13-10-2018 RPIT_00495 dfcbbe6dd5b3ea0c31b133ad3baa2ffa 388 PIRSF PIRSF500134 338 388 2.5 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 RPIT_00495 dfcbbe6dd5b3ea0c31b133ad3baa2ffa 388 PIRSF PIRSF500134 1 372 4.1E-106 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 RPIT_00495 dfcbbe6dd5b3ea0c31b133ad3baa2ffa 388 Gene3D G3DSA:3.40.50.720 222 388 7.3E-62 T 13-10-2018 RPIT_00495 dfcbbe6dd5b3ea0c31b133ad3baa2ffa 388 SMART SM00984 300 387 2.1E-10 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_10360 3900e5168fd63c567fb2c2229eb9e293 202 Gene3D G3DSA:2.40.30.100 6 83 4.7E-5 T 13-10-2018 IPR037079 AF2212/PG0164-like superfamily RPIT_10360 3900e5168fd63c567fb2c2229eb9e293 202 Pfam PF08922 Domain of unknown function (DUF1905) 14 81 1.0E-8 T 13-10-2018 IPR015018 Protein of unknown function DUF1905 RPIT_10360 3900e5168fd63c567fb2c2229eb9e293 202 SUPERFAMILY SSF141694 25 82 4.45E-6 T 13-10-2018 RPIT_11200 00bb22581a39db582f1af28f39e3480f 543 SUPERFAMILY SSF52029 185 374 2.39E-80 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily RPIT_11200 00bb22581a39db582f1af28f39e3480f 543 SUPERFAMILY SSF54849 137 202 6.87E-27 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily RPIT_11200 00bb22581a39db582f1af28f39e3480f 543 Hamap MF_00600 60 kDa chaperonin [groL]. 1 543 41.383 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RPIT_11200 00bb22581a39db582f1af28f39e3480f 543 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 5.7E-94 T 13-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 RPIT_11200 00bb22581a39db582f1af28f39e3480f 543 SUPERFAMILY SSF48592 6 518 1.42E-73 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily RPIT_11200 00bb22581a39db582f1af28f39e3480f 543 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 13-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RPIT_11200 00bb22581a39db582f1af28f39e3480f 543 Gene3D G3DSA:3.50.7.10 190 370 3.4E-222 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily RPIT_11200 00bb22581a39db582f1af28f39e3480f 543 Gene3D G3DSA:3.30.260.10 135 408 3.4E-222 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily RPIT_11200 00bb22581a39db582f1af28f39e3480f 543 Gene3D G3DSA:1.10.560.10 7 518 3.4E-222 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily RPIT_11200 00bb22581a39db582f1af28f39e3480f 543 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 524 7.8E-249 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RPIT_11200 00bb22581a39db582f1af28f39e3480f 543 PRINTS PR00298 60kDa chaperonin signature 26 52 3.4E-70 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RPIT_11200 00bb22581a39db582f1af28f39e3480f 543 PRINTS PR00298 60kDa chaperonin signature 266 289 3.4E-70 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RPIT_11200 00bb22581a39db582f1af28f39e3480f 543 PRINTS PR00298 60kDa chaperonin signature 82 109 3.4E-70 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RPIT_11200 00bb22581a39db582f1af28f39e3480f 543 PRINTS PR00298 60kDa chaperonin signature 396 417 3.4E-70 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RPIT_11200 00bb22581a39db582f1af28f39e3480f 543 PRINTS PR00298 60kDa chaperonin signature 348 373 3.4E-70 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RPIT_02560 71e564404828b1d606843b8543d5b0d2 206 Gene3D G3DSA:1.25.40.340 4 205 7.3E-60 T 13-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RPIT_02560 71e564404828b1d606843b8543d5b0d2 206 SMART SM01120 32 203 8.2E-55 T 13-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RPIT_02560 71e564404828b1d606843b8543d5b0d2 206 SUPERFAMILY SSF101473 7 203 1.06E-49 T 13-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RPIT_02560 71e564404828b1d606843b8543d5b0d2 206 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 201 1.8E-58 T 13-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 RPIT_02560 71e564404828b1d606843b8543d5b0d2 206 Pfam PF02734 DAK2 domain 33 202 3.7E-45 T 13-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RPIT_09800 aede0aac7628820891294d3ffd8a81db 439 SMART SM01091 343 429 1.5E-11 T 13-10-2018 IPR005170 Transporter-associated domain RPIT_09800 aede0aac7628820891294d3ffd8a81db 439 Gene3D G3DSA:3.30.465.10 341 426 1.1E-13 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 RPIT_09800 aede0aac7628820891294d3ffd8a81db 439 SUPERFAMILY SSF54631 207 340 9.6E-27 T 13-10-2018 RPIT_09800 aede0aac7628820891294d3ffd8a81db 439 Pfam PF01595 Domain of unknown function DUF21 7 190 7.2E-38 T 13-10-2018 IPR002550 CNNM, transmembrane domain RPIT_09800 aede0aac7628820891294d3ffd8a81db 439 Pfam PF00571 CBS domain 216 265 4.1E-4 T 13-10-2018 IPR000644 CBS domain RPIT_09800 aede0aac7628820891294d3ffd8a81db 439 Pfam PF00571 CBS domain 279 328 5.3E-5 T 13-10-2018 IPR000644 CBS domain RPIT_09800 aede0aac7628820891294d3ffd8a81db 439 Pfam PF03471 Transporter associated domain 347 427 4.0E-15 T 13-10-2018 IPR005170 Transporter-associated domain RPIT_09800 aede0aac7628820891294d3ffd8a81db 439 Gene3D G3DSA:3.10.580.10 190 339 6.1E-46 T 13-10-2018 RPIT_09800 aede0aac7628820891294d3ffd8a81db 439 SUPERFAMILY SSF56176 347 436 1.39E-13 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 RPIT_06550 87d3895a11b21d7f99b0dc413c693775 668 Gene3D G3DSA:1.20.58.280 111 191 7.8E-52 T 13-10-2018 RPIT_06550 87d3895a11b21d7f99b0dc413c693775 668 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 19 667 43.541 T 13-10-2018 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 RPIT_06550 87d3895a11b21d7f99b0dc413c693775 668 Pfam PF11896 Domain of unknown function (DUF3416) 21 210 1.1E-51 T 13-10-2018 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 RPIT_06550 87d3895a11b21d7f99b0dc413c693775 668 SUPERFAMILY SSF51445 216 575 2.29E-77 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_06550 87d3895a11b21d7f99b0dc413c693775 668 SMART SM00642 216 568 0.0043 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_06550 87d3895a11b21d7f99b0dc413c693775 668 Gene3D G3DSA:2.60.40.10 22 210 7.8E-52 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_06550 87d3895a11b21d7f99b0dc413c693775 668 Gene3D G3DSA:3.20.20.80 211 579 4.9E-157 T 13-10-2018 RPIT_06550 87d3895a11b21d7f99b0dc413c693775 668 Gene3D G3DSA:2.60.40.1180 580 668 1.1E-27 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta RPIT_12990 5b91ac47fe06c7358ff30e56594d3a8d 280 Gene3D G3DSA:3.40.50.2300 142 272 4.1E-35 T 13-10-2018 RPIT_12990 5b91ac47fe06c7358ff30e56594d3a8d 280 Gene3D G3DSA:3.40.50.2300 3 133 6.9E-46 T 13-10-2018 RPIT_12990 5b91ac47fe06c7358ff30e56594d3a8d 280 SUPERFAMILY SSF52788 4 127 9.16E-32 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily RPIT_12990 5b91ac47fe06c7358ff30e56594d3a8d 280 SMART SM00226 4 129 3.0E-36 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I RPIT_12990 5b91ac47fe06c7358ff30e56594d3a8d 280 SMART SM00226 142 272 7.6E-15 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I RPIT_12990 5b91ac47fe06c7358ff30e56594d3a8d 280 SUPERFAMILY SSF52788 144 271 1.07E-23 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily RPIT_12990 5b91ac47fe06c7358ff30e56594d3a8d 280 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 145 270 2.6E-12 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I RPIT_12990 5b91ac47fe06c7358ff30e56594d3a8d 280 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 126 2.0E-17 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I RPIT_05895 aac82d7202cb2656e9682d120d55970a 79 SUPERFAMILY SSF47413 22 77 1.89E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_05895 aac82d7202cb2656e9682d120d55970a 79 SMART SM00530 18 74 4.0E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_05895 aac82d7202cb2656e9682d120d55970a 79 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 21 78 2.8E-18 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_05895 aac82d7202cb2656e9682d120d55970a 79 Gene3D G3DSA:1.10.260.40 16 78 2.7E-11 T 13-10-2018 RPIT_04210 06d45564435ef298943e6933775c98fd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 267 282 2.3E-35 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04210 06d45564435ef298943e6933775c98fd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 2.3E-35 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04210 06d45564435ef298943e6933775c98fd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 2.3E-35 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04210 06d45564435ef298943e6933775c98fd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 2.3E-35 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04210 06d45564435ef298943e6933775c98fd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 2.3E-35 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04210 06d45564435ef298943e6933775c98fd 331 SUPERFAMILY SSF51735 1 152 1.24E-65 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_04210 06d45564435ef298943e6933775c98fd 331 PIRSF PIRSF000149 1 330 3.0E-134 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04210 06d45564435ef298943e6933775c98fd 331 Gene3D G3DSA:3.40.50.720 4 323 3.2E-152 T 13-10-2018 RPIT_04210 06d45564435ef298943e6933775c98fd 331 Gene3D G3DSA:3.30.360.10 152 312 3.2E-152 T 13-10-2018 RPIT_04210 06d45564435ef298943e6933775c98fd 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 310 1.2E-63 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04210 06d45564435ef298943e6933775c98fd 331 SMART SM00846 3 153 2.6E-97 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04210 06d45564435ef298943e6933775c98fd 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04210 06d45564435ef298943e6933775c98fd 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 103 2.0E-39 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04210 06d45564435ef298943e6933775c98fd 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 322 5.4E-135 T 13-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04210 06d45564435ef298943e6933775c98fd 331 SUPERFAMILY SSF55347 153 311 3.27E-66 T 13-10-2018 RPIT_06370 c61cbd5c609e8bcd3965756e4777807a 202 SUPERFAMILY SSF54211 88 187 7.13E-26 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RPIT_06370 c61cbd5c609e8bcd3965756e4777807a 202 SUPERFAMILY SSF54211 3 86 1.26E-32 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RPIT_06370 c61cbd5c609e8bcd3965756e4777807a 202 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 RPIT_06370 c61cbd5c609e8bcd3965756e4777807a 202 Gene3D G3DSA:3.30.230.40 1 90 4.3E-37 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 RPIT_06370 c61cbd5c609e8bcd3965756e4777807a 202 Gene3D G3DSA:3.30.230.40 91 202 1.6E-36 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 RPIT_06370 c61cbd5c609e8bcd3965756e4777807a 202 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 202 40.513 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 RPIT_06370 c61cbd5c609e8bcd3965756e4777807a 202 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 182 1.2E-56 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 RPIT_06370 c61cbd5c609e8bcd3965756e4777807a 202 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 164 176 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 RPIT_00190 7bccf4e2cbe17652f0bb93c9cef59bd7 199 SUPERFAMILY SSF53335 33 198 8.67E-28 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_00190 7bccf4e2cbe17652f0bb93c9cef59bd7 199 Pfam PF13578 Methyltransferase domain 55 154 7.8E-8 T 13-10-2018 RPIT_00190 7bccf4e2cbe17652f0bb93c9cef59bd7 199 Gene3D G3DSA:3.40.50.150 9 199 2.1E-31 T 13-10-2018 RPIT_13450 ee7f36ccc4f487c4ac3a86c02c153d6c 155 SUPERFAMILY SSF55961 4 153 5.79E-14 T 13-10-2018 RPIT_13450 ee7f36ccc4f487c4ac3a86c02c153d6c 155 Gene3D G3DSA:3.30.530.20 2 154 2.5E-6 T 13-10-2018 IPR023393 START-like domain superfamily RPIT_02035 7513b82aa09096b7423b3fef6bf87e9e 441 Gene3D G3DSA:3.30.70.360 198 358 1.2E-122 T 13-10-2018 RPIT_02035 7513b82aa09096b7423b3fef6bf87e9e 441 Pfam PF01546 Peptidase family M20/M25/M40 81 429 1.4E-31 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 RPIT_02035 7513b82aa09096b7423b3fef6bf87e9e 441 SUPERFAMILY SSF53187 2 440 4.1E-58 T 13-10-2018 RPIT_02035 7513b82aa09096b7423b3fef6bf87e9e 441 Gene3D G3DSA:3.40.630.10 16 428 1.2E-122 T 13-10-2018 RPIT_02035 7513b82aa09096b7423b3fef6bf87e9e 441 Pfam PF07687 Peptidase dimerisation domain 190 339 3.1E-18 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain RPIT_13250 f14f9f915ad004e5c00641f4911ce84a 68 Gene3D G3DSA:1.10.260.40 5 66 3.4E-10 T 13-10-2018 RPIT_13250 f14f9f915ad004e5c00641f4911ce84a 68 SUPERFAMILY SSF47413 1 68 5.33E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_13250 f14f9f915ad004e5c00641f4911ce84a 68 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 68 6.2E-23 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_13250 f14f9f915ad004e5c00641f4911ce84a 68 SMART SM00530 6 62 7.9E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_04140 ff91a4065b1b8ce22904111663b8ebf3 367 Gene3D G3DSA:3.30.1360.120 3 230 1.6E-70 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RPIT_04140 ff91a4065b1b8ce22904111663b8ebf3 367 SUPERFAMILY SSF103025 2 282 1.57E-75 T 13-10-2018 RPIT_04140 ff91a4065b1b8ce22904111663b8ebf3 367 Pfam PF01571 Aminomethyltransferase folate-binding domain 6 253 3.5E-76 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain RPIT_04140 ff91a4065b1b8ce22904111663b8ebf3 367 SUPERFAMILY SSF101790 275 367 1.01E-21 T 13-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal RPIT_04140 ff91a4065b1b8ce22904111663b8ebf3 367 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 362 5.6E-88 T 13-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 RPIT_04140 ff91a4065b1b8ce22904111663b8ebf3 367 PIRSF PIRSF006487 1 367 1.7E-63 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 RPIT_04140 ff91a4065b1b8ce22904111663b8ebf3 367 Gene3D G3DSA:4.10.1250.10 231 279 6.6E-17 T 13-10-2018 RPIT_04140 ff91a4065b1b8ce22904111663b8ebf3 367 Gene3D G3DSA:2.40.30.110 281 357 1.6E-19 T 13-10-2018 RPIT_04140 ff91a4065b1b8ce22904111663b8ebf3 367 Gene3D G3DSA:3.30.70.1400 51 138 1.6E-70 T 13-10-2018 RPIT_04140 ff91a4065b1b8ce22904111663b8ebf3 367 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 266 357 7.6E-16 T 13-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RPIT_03840 7e566cb42aa723671e926a790fe0720a 731 Pfam PF13538 UvrD-like helicase C-terminal domain 673 718 5.5E-8 T 13-10-2018 IPR027785 UvrD-like helicase C-terminal domain RPIT_03840 7e566cb42aa723671e926a790fe0720a 731 SUPERFAMILY SSF52540 183 723 3.32E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_03840 7e566cb42aa723671e926a790fe0720a 731 Pfam PF13245 AAA domain 195 550 5.8E-15 T 13-10-2018 RPIT_03840 7e566cb42aa723671e926a790fe0720a 731 Gene3D G3DSA:3.40.50.300 575 727 2.0E-12 T 13-10-2018 RPIT_03770 4ccfc0584e44aef774f005aebb1fc2d2 380 Pfam PF00877 NlpC/P60 family 278 372 1.1E-24 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain RPIT_03770 4ccfc0584e44aef774f005aebb1fc2d2 380 SUPERFAMILY SSF54001 262 379 2.49E-38 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily RPIT_03770 4ccfc0584e44aef774f005aebb1fc2d2 380 Gene3D G3DSA:3.90.1720.10 180 379 1.2E-52 T 13-10-2018 RPIT_05680 2d24eaf4bce2fa8d66f2ad47d2c3b653 161 SUPERFAMILY SSF55826 8 158 3.66E-43 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 RPIT_05680 2d24eaf4bce2fa8d66f2ad47d2c3b653 161 Pfam PF04073 Aminoacyl-tRNA editing domain 38 149 3.5E-26 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIT_05680 2d24eaf4bce2fa8d66f2ad47d2c3b653 161 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 8 159 1.5E-51 T 13-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RPIT_05680 2d24eaf4bce2fa8d66f2ad47d2c3b653 161 PIRSF PIRSF006181 3 161 4.3E-51 T 13-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RPIT_05680 2d24eaf4bce2fa8d66f2ad47d2c3b653 161 Gene3D G3DSA:3.90.960.10 2 160 9.7E-60 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 RPIT_10960 620424e6a7f942a3bee3b6cecad436f1 279 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 207 2.2E-27 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 RPIT_10960 620424e6a7f942a3bee3b6cecad436f1 279 Gene3D G3DSA:3.30.950.10 115 229 2.6E-39 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 RPIT_10960 620424e6a7f942a3bee3b6cecad436f1 279 SUPERFAMILY SSF53790 4 223 1.96E-70 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 RPIT_10960 620424e6a7f942a3bee3b6cecad436f1 279 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 5 225 31.892 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 RPIT_10960 620424e6a7f942a3bee3b6cecad436f1 279 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 274 7.1E-61 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 RPIT_10960 620424e6a7f942a3bee3b6cecad436f1 279 Gene3D G3DSA:3.40.1010.10 1 114 5.3E-31 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 RPIT_10960 620424e6a7f942a3bee3b6cecad436f1 279 PIRSF PIRSF005917 1 278 2.8E-86 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 RPIT_12195 2eb5334362fd6afb9d3ca8d0e80081e4 1044 SUPERFAMILY SSF52374 10 645 5.12E-122 T 13-10-2018 RPIT_12195 2eb5334362fd6afb9d3ca8d0e80081e4 1044 SUPERFAMILY SSF50677 205 395 4.5E-46 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RPIT_12195 2eb5334362fd6afb9d3ca8d0e80081e4 1044 SUPERFAMILY SSF47323 656 890 7.29E-51 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_12195 2eb5334362fd6afb9d3ca8d0e80081e4 1044 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 10 839 1.1E-268 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RPIT_12195 2eb5334362fd6afb9d3ca8d0e80081e4 1044 Gene3D G3DSA:3.40.50.620 20 627 4.4E-229 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_12195 2eb5334362fd6afb9d3ca8d0e80081e4 1044 Pfam PF08264 Anticodon-binding domain of tRNA 688 833 4.7E-29 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 RPIT_12195 2eb5334362fd6afb9d3ca8d0e80081e4 1044 Gene3D G3DSA:3.90.740.10 202 399 4.4E-229 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RPIT_12195 2eb5334362fd6afb9d3ca8d0e80081e4 1044 Gene3D G3DSA:1.10.730.10 642 826 2.2E-49 T 13-10-2018 RPIT_12195 2eb5334362fd6afb9d3ca8d0e80081e4 1044 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 46 57 1.6E-26 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RPIT_12195 2eb5334362fd6afb9d3ca8d0e80081e4 1044 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 229 252 1.6E-26 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RPIT_12195 2eb5334362fd6afb9d3ca8d0e80081e4 1044 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 560 569 1.6E-26 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RPIT_12195 2eb5334362fd6afb9d3ca8d0e80081e4 1044 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 518 531 1.6E-26 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RPIT_12195 2eb5334362fd6afb9d3ca8d0e80081e4 1044 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 393 408 1.6E-26 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RPIT_12195 2eb5334362fd6afb9d3ca8d0e80081e4 1044 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 23 631 1.9E-168 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_12195 2eb5334362fd6afb9d3ca8d0e80081e4 1044 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 8 1032 13.615 T 13-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RPIT_02410 c0f0940c232f52190e222b8adaa13fab 737 Pfam PF03971 Monomeric isocitrate dehydrogenase 3 734 0.0 T 13-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 RPIT_02410 c0f0940c232f52190e222b8adaa13fab 737 PIRSF PIRSF009407 1 737 0.0 T 13-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 RPIT_02410 c0f0940c232f52190e222b8adaa13fab 737 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 2 736 0.0 T 13-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 RPIT_02410 c0f0940c232f52190e222b8adaa13fab 737 SUPERFAMILY SSF53659 3 736 0.0 T 13-10-2018 RPIT_02410 c0f0940c232f52190e222b8adaa13fab 737 Gene3D G3DSA:3.40.718.10 399 668 4.3E-8 T 13-10-2018 RPIT_06195 5fc8e4aa18733e22edca10dd583be661 186 SUPERFAMILY SSF50104 1 63 3.01E-19 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily RPIT_06195 5fc8e4aa18733e22edca10dd583be661 186 PIRSF PIRSF005901 1 186 2.1E-66 T 13-10-2018 IPR020599 Translation elongation factor P/YeiP RPIT_06195 5fc8e4aa18733e22edca10dd583be661 186 SMART SM00841 129 184 1.2E-31 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 RPIT_06195 5fc8e4aa18733e22edca10dd583be661 186 Gene3D G3DSA:2.30.30.30 1 62 1.4E-25 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 RPIT_06195 5fc8e4aa18733e22edca10dd583be661 186 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 121 2.3E-22 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 RPIT_06195 5fc8e4aa18733e22edca10dd583be661 186 Pfam PF09285 Elongation factor P, C-terminal 129 184 1.5E-25 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 RPIT_06195 5fc8e4aa18733e22edca10dd583be661 186 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 2.2E-24 T 13-10-2018 IPR013185 Translation elongation factor, KOW-like RPIT_06195 5fc8e4aa18733e22edca10dd583be661 186 Gene3D G3DSA:2.40.50.140 64 127 4.6E-25 T 13-10-2018 RPIT_06195 5fc8e4aa18733e22edca10dd583be661 186 TIGRFAM TIGR00038 efp: translation elongation factor P 3 185 4.0E-75 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 RPIT_06195 5fc8e4aa18733e22edca10dd583be661 186 SUPERFAMILY SSF50249 65 129 3.26E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_06195 5fc8e4aa18733e22edca10dd583be661 186 SUPERFAMILY SSF50249 129 185 8.05E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_06195 5fc8e4aa18733e22edca10dd583be661 186 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 13-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site RPIT_06195 5fc8e4aa18733e22edca10dd583be661 186 Hamap MF_00141 Elongation factor P [efp]. 1 185 48.514 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 RPIT_06195 5fc8e4aa18733e22edca10dd583be661 186 SMART SM01185 67 121 4.3E-29 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 RPIT_06195 5fc8e4aa18733e22edca10dd583be661 186 Gene3D G3DSA:2.40.50.140 128 186 3.2E-25 T 13-10-2018 RPIT_08515 78338b763726aa46cac054333c4e858c 520 SUPERFAMILY SSF52540 2 217 1.25E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_08515 78338b763726aa46cac054333c4e858c 520 Gene3D G3DSA:3.40.50.300 1 234 7.9E-63 T 13-10-2018 RPIT_08515 78338b763726aa46cac054333c4e858c 520 Pfam PF00005 ABC transporter 302 430 7.8E-18 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_08515 78338b763726aa46cac054333c4e858c 520 SUPERFAMILY SSF52540 273 500 2.06E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_08515 78338b763726aa46cac054333c4e858c 520 Pfam PF00005 ABC transporter 19 170 1.5E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_08515 78338b763726aa46cac054333c4e858c 520 Gene3D G3DSA:3.40.50.300 275 505 3.2E-45 T 13-10-2018 RPIT_08515 78338b763726aa46cac054333c4e858c 520 SMART SM00382 28 212 1.4E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_08515 78338b763726aa46cac054333c4e858c 520 SMART SM00382 309 479 2.6E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_08515 78338b763726aa46cac054333c4e858c 520 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_00045 8b15603dabc744d0ba82f06d6384c40a 160 Gene3D G3DSA:3.40.50.720 14 139 1.5E-30 T 13-10-2018 RPIT_00045 8b15603dabc744d0ba82f06d6384c40a 160 Pfam PF13241 Putative NAD(P)-binding 20 120 1.4E-21 T 13-10-2018 RPIT_00045 8b15603dabc744d0ba82f06d6384c40a 160 SUPERFAMILY SSF51735 20 117 8.59E-19 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_00045 8b15603dabc744d0ba82f06d6384c40a 160 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 20 153 1.2E-20 T 13-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 RPIT_11575 ee3b86df50e20b1dcbc4342ecd287408 451 SMART SM00116 229 276 4.4 T 13-10-2018 IPR000644 CBS domain RPIT_11575 ee3b86df50e20b1dcbc4342ecd287408 451 SMART SM00116 288 336 0.22 T 13-10-2018 IPR000644 CBS domain RPIT_11575 ee3b86df50e20b1dcbc4342ecd287408 451 Gene3D G3DSA:3.30.465.10 351 446 8.0E-23 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 RPIT_11575 ee3b86df50e20b1dcbc4342ecd287408 451 Gene3D G3DSA:3.10.580.10 201 347 4.5E-34 T 13-10-2018 RPIT_11575 ee3b86df50e20b1dcbc4342ecd287408 451 SMART SM01091 352 447 2.4E-18 T 13-10-2018 IPR005170 Transporter-associated domain RPIT_11575 ee3b86df50e20b1dcbc4342ecd287408 451 Pfam PF00571 CBS domain 282 336 2.3E-5 T 13-10-2018 IPR000644 CBS domain RPIT_11575 ee3b86df50e20b1dcbc4342ecd287408 451 Pfam PF00571 CBS domain 232 273 5.6E-4 T 13-10-2018 IPR000644 CBS domain RPIT_11575 ee3b86df50e20b1dcbc4342ecd287408 451 SUPERFAMILY SSF56176 353 448 4.36E-16 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 RPIT_11575 ee3b86df50e20b1dcbc4342ecd287408 451 Pfam PF01595 Domain of unknown function DUF21 13 204 7.8E-35 T 13-10-2018 IPR002550 CNNM, transmembrane domain RPIT_11575 ee3b86df50e20b1dcbc4342ecd287408 451 Pfam PF03471 Transporter associated domain 354 445 1.2E-18 T 13-10-2018 IPR005170 Transporter-associated domain RPIT_11575 ee3b86df50e20b1dcbc4342ecd287408 451 SUPERFAMILY SSF54631 210 346 2.27E-26 T 13-10-2018 RPIT_11170 c84aaa1401318fdeffceab07ccc37d91 262 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 12 224 1.2E-16 T 13-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 RPIT_11170 c84aaa1401318fdeffceab07ccc37d91 262 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 120 138 - T 13-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 RPIT_11170 c84aaa1401318fdeffceab07ccc37d91 262 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 241 38.382 T 13-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 RPIT_11170 c84aaa1401318fdeffceab07ccc37d91 262 Gene3D G3DSA:3.40.50.1360 1 259 4.6E-90 T 13-10-2018 RPIT_11170 c84aaa1401318fdeffceab07ccc37d91 262 SUPERFAMILY SSF100950 1 249 7.44E-84 T 13-10-2018 IPR037171 NagB/RpiA transferase-like RPIT_11170 c84aaa1401318fdeffceab07ccc37d91 262 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 249 3.4E-76 T 13-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 RPIT_12300 79cd0fefb0c12c01a9bb3088cda9bb8b 162 SUPERFAMILY SSF53155 1 79 5.69E-19 T 13-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 RPIT_12300 79cd0fefb0c12c01a9bb3088cda9bb8b 162 Gene3D G3DSA:3.30.160.70 1 70 9.7E-19 T 13-10-2018 RPIT_12300 79cd0fefb0c12c01a9bb3088cda9bb8b 162 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 5 154 43.657 T 13-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 RPIT_12300 79cd0fefb0c12c01a9bb3088cda9bb8b 162 Gene3D G3DSA:1.10.10.10 73 157 1.4E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_12300 79cd0fefb0c12c01a9bb3088cda9bb8b 162 SUPERFAMILY SSF46767 73 153 3.53E-33 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 RPIT_12300 79cd0fefb0c12c01a9bb3088cda9bb8b 162 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 124 130 - T 13-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 RPIT_12300 79cd0fefb0c12c01a9bb3088cda9bb8b 162 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 74 153 2.9E-37 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RPIT_12300 79cd0fefb0c12c01a9bb3088cda9bb8b 162 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 75 154 1.3E-34 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RPIT_12300 79cd0fefb0c12c01a9bb3088cda9bb8b 162 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 70 5.4E-8 T 13-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 RPIT_12170 24b365596009298b410300d980ddbd5e 229 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 8 209 1.3E-67 T 13-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 RPIT_12170 24b365596009298b410300d980ddbd5e 229 SMART SM01133 7 215 3.8E-81 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 RPIT_12170 24b365596009298b410300d980ddbd5e 229 SUPERFAMILY SSF51569 4 215 8.06E-70 T 13-10-2018 RPIT_12170 24b365596009298b410300d980ddbd5e 229 Gene3D G3DSA:3.20.20.70 1 218 1.2E-80 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_12170 24b365596009298b410300d980ddbd5e 229 Pfam PF01791 DeoC/LacD family aldolase 9 207 2.0E-15 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 RPIT_12170 24b365596009298b410300d980ddbd5e 229 PIRSF PIRSF001357 1 223 3.7E-68 T 13-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 RPIT_12170 24b365596009298b410300d980ddbd5e 229 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 6 217 32.7 T 13-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 Pfam PF00271 Helicase conserved C-terminal domain 849 948 2.4E-13 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 Pfam PF00270 DEAD/DEAH box helicase 646 804 9.8E-16 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 SMART SM00490 865 949 1.5E-15 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 Gene3D G3DSA:3.30.2060.10 159 246 9.3E-62 T 13-10-2018 RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 176 1115 0.0 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 Gene3D G3DSA:3.90.1150.50 1038 1173 4.0E-27 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 SUPERFAMILY SSF141259 508 582 4.97E-19 T 13-10-2018 IPR036101 CarD-like/TRCF domain superfamily RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 SUPERFAMILY SSF52540 564 822 1.03E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 SUPERFAMILY SSF143517 1029 1173 4.71E-33 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 SMART SM01058 514 615 1.2E-50 T 13-10-2018 IPR003711 CarD-like/TRCF domain RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 Gene3D G3DSA:3.40.50.300 514 1027 7.4E-229 T 13-10-2018 RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 Gene3D G3DSA:3.40.50.11180 68 331 9.3E-62 T 13-10-2018 RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 Pfam PF03461 TRCF domain 1043 1124 5.1E-25 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 SUPERFAMILY SSF52540 821 1028 4.58E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 58 1139 27.705 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 Gene3D G3DSA:3.40.50.300 581 820 7.4E-229 T 13-10-2018 RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 SMART SM00487 639 829 7.7E-31 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 SMART SM00982 1042 1137 7.5E-36 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 SUPERFAMILY SSF52540 403 501 7.61E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 Pfam PF02559 CarD-like/TRCF domain 515 614 6.8E-31 T 13-10-2018 IPR003711 CarD-like/TRCF domain RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 SUPERFAMILY SSF52540 51 376 2.12E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10720 3484aca90591619cba0e7f41d889d4b8 1175 Gene3D G3DSA:2.30.30.840 518 580 7.4E-229 T 13-10-2018 RPIT_02910 312406e3461e0c1ad6da40307a1edb80 132 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 132 21.983 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_02910 312406e3461e0c1ad6da40307a1edb80 132 Gene3D G3DSA:3.30.1390.10 62 132 3.3E-26 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RPIT_02910 312406e3461e0c1ad6da40307a1edb80 132 SUPERFAMILY SSF54736 66 132 1.92E-20 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RPIT_02910 312406e3461e0c1ad6da40307a1edb80 132 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 132 5.0E-42 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_02910 312406e3461e0c1ad6da40307a1edb80 132 Gene3D G3DSA:1.20.5.710 4 61 6.1E-20 T 13-10-2018 RPIT_02910 312406e3461e0c1ad6da40307a1edb80 132 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 67 114 2.0E-14 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_02910 312406e3461e0c1ad6da40307a1edb80 132 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 7.7E-20 T 13-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_02910 312406e3461e0c1ad6da40307a1edb80 132 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 66 132 2.4E-26 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_02910 312406e3461e0c1ad6da40307a1edb80 132 SUPERFAMILY SSF48300 4 50 1.83E-14 T 13-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_05715 08d6905e39d2636d03fe9b1b81c818d1 246 Pfam PF05949 Bacterial protein of unknown function (DUF881) 100 242 1.2E-36 T 13-10-2018 IPR010273 Protein of unknown function DUF881 RPIT_05715 08d6905e39d2636d03fe9b1b81c818d1 246 Gene3D G3DSA:3.30.70.1880 99 243 3.6E-32 T 13-10-2018 RPIT_12335 e4d7221f5b4500c99281a346762e5f94 640 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 566 638 2.5E-8 T 13-10-2018 IPR039561 Peptidase M15C GO:0008233 RPIT_12335 e4d7221f5b4500c99281a346762e5f94 640 Gene3D G3DSA:3.30.1380.10 511 638 7.9E-7 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 RPIT_12335 e4d7221f5b4500c99281a346762e5f94 640 SUPERFAMILY SSF55166 490 638 3.88E-18 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 RPIT_02585 90d2a7ceaab70b034e242ff1b8f734b7 509 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 8 399 3.1E-94 T 13-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 RPIT_02585 90d2a7ceaab70b034e242ff1b8f734b7 509 Gene3D G3DSA:3.40.50.970 2 197 5.2E-57 T 13-10-2018 RPIT_02585 90d2a7ceaab70b034e242ff1b8f734b7 509 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 1 509 26.585 T 13-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 RPIT_02585 90d2a7ceaab70b034e242ff1b8f734b7 509 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 172 9.7E-28 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RPIT_02585 90d2a7ceaab70b034e242ff1b8f734b7 509 Gene3D G3DSA:3.40.50.970 337 508 9.5E-49 T 13-10-2018 RPIT_02585 90d2a7ceaab70b034e242ff1b8f734b7 509 SUPERFAMILY SSF52518 6 173 1.42E-28 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_02585 90d2a7ceaab70b034e242ff1b8f734b7 509 PIRSF PIRSF004983 1 506 4.5E-110 T 13-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 RPIT_02585 90d2a7ceaab70b034e242ff1b8f734b7 509 Gene3D G3DSA:3.40.50.1220 201 335 6.6E-25 T 13-10-2018 RPIT_02585 90d2a7ceaab70b034e242ff1b8f734b7 509 SUPERFAMILY SSF52518 337 496 4.16E-16 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_05105 efa2bc3fbb423b01625a6b8c6a926110 610 Pfam PF10410 DnaB-helicase binding domain of primase 373 427 5.7E-12 T 13-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 RPIT_05105 efa2bc3fbb423b01625a6b8c6a926110 610 Gene3D G3DSA:3.40.1360.10 240 370 1.4E-34 T 13-10-2018 RPIT_05105 efa2bc3fbb423b01625a6b8c6a926110 610 SUPERFAMILY SSF57783 4 99 1.87E-32 T 13-10-2018 RPIT_05105 efa2bc3fbb423b01625a6b8c6a926110 610 SUPERFAMILY SSF56731 116 426 2.56E-85 T 13-10-2018 RPIT_05105 efa2bc3fbb423b01625a6b8c6a926110 610 Gene3D G3DSA:3.90.580.10 1 102 4.3E-34 T 13-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 RPIT_05105 efa2bc3fbb423b01625a6b8c6a926110 610 SMART SM00400 37 91 1.7E-32 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RPIT_05105 efa2bc3fbb423b01625a6b8c6a926110 610 SMART SM00493 258 336 7.2E-13 T 13-10-2018 IPR006171 TOPRIM domain RPIT_05105 efa2bc3fbb423b01625a6b8c6a926110 610 Hamap MF_00974 DNA primase [dnaG]. 4 596 24.908 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RPIT_05105 efa2bc3fbb423b01625a6b8c6a926110 610 TIGRFAM TIGR01391 dnaG: DNA primase 5 419 6.8E-106 T 13-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 RPIT_05105 efa2bc3fbb423b01625a6b8c6a926110 610 PIRSF PIRSF002811 2 605 1.6E-142 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RPIT_05105 efa2bc3fbb423b01625a6b8c6a926110 610 Pfam PF08278 DNA primase DnaG DnaB-binding 472 582 1.8E-9 T 13-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 RPIT_05105 efa2bc3fbb423b01625a6b8c6a926110 610 Pfam PF01807 CHC2 zinc finger 6 101 1.9E-32 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RPIT_05105 efa2bc3fbb423b01625a6b8c6a926110 610 Gene3D G3DSA:3.90.980.10 111 239 1.1E-29 T 13-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily RPIT_05105 efa2bc3fbb423b01625a6b8c6a926110 610 SMART SM00766 470 591 7.2E-7 T 13-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 RPIT_05105 efa2bc3fbb423b01625a6b8c6a926110 610 Pfam PF13662 Toprim domain 258 329 4.9E-16 T 13-10-2018 IPR006171 TOPRIM domain RPIT_05105 efa2bc3fbb423b01625a6b8c6a926110 610 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 250 4.2E-31 T 13-10-2018 IPR013264 DNA primase, catalytic core, N-terminal RPIT_12575 0daa5601f40896868e86562d4707f29f 296 Gene3D G3DSA:3.40.50.300 1 232 6.2E-57 T 13-10-2018 RPIT_12575 0daa5601f40896868e86562d4707f29f 296 SUPERFAMILY SSF52540 4 218 1.68E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_12575 0daa5601f40896868e86562d4707f29f 296 Pfam PF00005 ABC transporter 20 159 2.2E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_12575 0daa5601f40896868e86562d4707f29f 296 SMART SM00382 29 224 1.6E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_12575 0daa5601f40896868e86562d4707f29f 296 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_11710 c30ae68799798b623ea3ed444ced2ba8 275 SUPERFAMILY SSF50182 97 159 7.52E-15 T 13-10-2018 IPR010920 LSM domain superfamily RPIT_11710 c30ae68799798b623ea3ed444ced2ba8 275 SUPERFAMILY SSF82689 166 252 2.75E-10 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RPIT_11710 c30ae68799798b623ea3ed444ced2ba8 275 Gene3D G3DSA:2.30.30.60 113 159 1.2E-12 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily RPIT_11710 c30ae68799798b623ea3ed444ced2ba8 275 Pfam PF00924 Mechanosensitive ion channel 57 252 2.3E-33 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RPIT_11710 c30ae68799798b623ea3ed444ced2ba8 275 Gene3D G3DSA:3.30.70.100 163 253 1.0E-8 T 13-10-2018 RPIT_05010 7612aee0b1f50f0317624405f76adde1 438 SMART SM01091 341 421 8.6E-16 T 13-10-2018 IPR005170 Transporter-associated domain RPIT_05010 7612aee0b1f50f0317624405f76adde1 438 Pfam PF01595 Domain of unknown function DUF21 11 187 3.1E-26 T 13-10-2018 IPR002550 CNNM, transmembrane domain RPIT_05010 7612aee0b1f50f0317624405f76adde1 438 Gene3D G3DSA:3.30.465.10 334 421 4.7E-19 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 RPIT_05010 7612aee0b1f50f0317624405f76adde1 438 SMART SM00116 278 326 27.0 T 13-10-2018 IPR000644 CBS domain RPIT_05010 7612aee0b1f50f0317624405f76adde1 438 SMART SM00116 212 261 0.0016 T 13-10-2018 IPR000644 CBS domain RPIT_05010 7612aee0b1f50f0317624405f76adde1 438 SUPERFAMILY SSF56176 338 418 3.27E-13 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 RPIT_05010 7612aee0b1f50f0317624405f76adde1 438 Gene3D G3DSA:3.10.580.10 183 333 4.4E-52 T 13-10-2018 RPIT_05010 7612aee0b1f50f0317624405f76adde1 438 Pfam PF03471 Transporter associated domain 342 419 2.7E-13 T 13-10-2018 IPR005170 Transporter-associated domain RPIT_05010 7612aee0b1f50f0317624405f76adde1 438 Pfam PF00571 CBS domain 272 326 7.2E-6 T 13-10-2018 IPR000644 CBS domain RPIT_05010 7612aee0b1f50f0317624405f76adde1 438 Pfam PF00571 CBS domain 203 260 5.5E-7 T 13-10-2018 IPR000644 CBS domain RPIT_05010 7612aee0b1f50f0317624405f76adde1 438 SUPERFAMILY SSF54631 198 345 8.97E-33 T 13-10-2018 RPIT_06515 febece99c376ae34835f946db8931d22 97 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 94 6.6E-21 T 13-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RPIT_06515 febece99c376ae34835f946db8931d22 97 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 1.6E-12 T 13-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RPIT_06515 febece99c376ae34835f946db8931d22 97 Gene3D G3DSA:1.10.20.60 1 93 3.1E-19 T 13-10-2018 RPIT_06515 febece99c376ae34835f946db8931d22 97 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 20.439 T 13-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RPIT_06515 febece99c376ae34835f946db8931d22 97 SUPERFAMILY SSF141000 3 93 7.98E-23 T 13-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 RPIT_04325 2214e9953f7b51fd342d0f59af6aa4c2 252 Pfam PF01061 ABC-2 type transporter 29 219 1.4E-10 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 RPIT_05795 c82ece927519525886a7067f05befbe7 476 Gene3D G3DSA:2.30.40.10 41 55 4.5E-86 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 RPIT_05795 c82ece927519525886a7067f05befbe7 476 Gene3D G3DSA:3.10.310.70 74 173 4.5E-86 T 13-10-2018 RPIT_05795 c82ece927519525886a7067f05befbe7 476 SUPERFAMILY SSF51338 17 473 1.49E-11 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 RPIT_05795 c82ece927519525886a7067f05befbe7 476 Gene3D G3DSA:3.20.20.140 56 428 4.5E-86 T 13-10-2018 RPIT_05795 c82ece927519525886a7067f05befbe7 476 SUPERFAMILY SSF51556 55 429 9.26E-29 T 13-10-2018 IPR032466 Metal-dependent hydrolase RPIT_05795 c82ece927519525886a7067f05befbe7 476 Pfam PF07969 Amidohydrolase family 44 474 6.8E-48 T 13-10-2018 IPR013108 Amidohydrolase 3 RPIT_14545 b86889f95f1ce304208d88a99002861e 220 Gene3D G3DSA:3.30.70.20 146 208 1.6E-7 T 13-10-2018 RPIT_14545 b86889f95f1ce304208d88a99002861e 220 SMART SM00091 15 81 2.2E-5 T 13-10-2018 IPR000014 PAS domain RPIT_14545 b86889f95f1ce304208d88a99002861e 220 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 133 7.2E-15 T 13-10-2018 IPR000014 PAS domain RPIT_14545 b86889f95f1ce304208d88a99002861e 220 Gene3D G3DSA:3.30.450.20 22 135 5.0E-20 T 13-10-2018 RPIT_14545 b86889f95f1ce304208d88a99002861e 220 Pfam PF06902 Divergent 4Fe-4S mono-cluster 143 208 3.0E-20 T 13-10-2018 IPR010693 Divergent 4Fe-4S mono-cluster RPIT_14545 b86889f95f1ce304208d88a99002861e 220 Pfam PF08448 PAS fold 21 133 2.8E-12 T 13-10-2018 IPR013656 PAS fold-4 RPIT_14545 b86889f95f1ce304208d88a99002861e 220 SUPERFAMILY SSF55785 20 126 5.93E-20 T 13-10-2018 IPR035965 PAS domain superfamily RPIT_10780 59d001a37a4b5a2306d83e457fa77c05 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 158 5.1E-22 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 RPIT_10780 59d001a37a4b5a2306d83e457fa77c05 169 Pfam PF04542 Sigma-70 region 2 20 83 6.3E-9 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_10780 59d001a37a4b5a2306d83e457fa77c05 169 SUPERFAMILY SSF88659 102 159 2.8E-15 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like RPIT_10780 59d001a37a4b5a2306d83e457fa77c05 169 SUPERFAMILY SSF88946 12 97 1.8E-13 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_10780 59d001a37a4b5a2306d83e457fa77c05 169 Gene3D G3DSA:1.10.1740.10 7 82 3.6E-11 T 13-10-2018 RPIT_10780 59d001a37a4b5a2306d83e457fa77c05 169 Gene3D G3DSA:1.10.10.10 83 163 5.8E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_10780 59d001a37a4b5a2306d83e457fa77c05 169 Pfam PF08281 Sigma-70, region 4 107 157 2.5E-16 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIT_10780 59d001a37a4b5a2306d83e457fa77c05 169 TIGRFAM TIGR02983 SigE-fam_strep: RNA polymerase sigma-70 factor, sigma-E family 8 162 8.2E-49 T 13-10-2018 IPR014325 RNA polymerase sigma-E factor, actinobacteria GO:0016987 RPIT_12895 f016d01806c421cc0c0fcb9c2b6d5a56 662 SMART SM00382 445 637 2.4E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_12895 f016d01806c421cc0c0fcb9c2b6d5a56 662 Pfam PF00005 ABC transporter 437 585 4.0E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_12895 f016d01806c421cc0c0fcb9c2b6d5a56 662 SUPERFAMILY SSF52540 413 656 2.83E-90 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_12895 f016d01806c421cc0c0fcb9c2b6d5a56 662 Pfam PF00664 ABC transporter transmembrane region 66 376 1.3E-62 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 RPIT_12895 f016d01806c421cc0c0fcb9c2b6d5a56 662 SUPERFAMILY SSF90123 51 407 5.62E-86 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_12895 f016d01806c421cc0c0fcb9c2b6d5a56 662 ProSitePatterns PS00211 ABC transporters family signature. 557 571 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_12895 f016d01806c421cc0c0fcb9c2b6d5a56 662 Gene3D G3DSA:3.40.50.300 416 661 1.7E-89 T 13-10-2018 RPIT_03695 deeeab1a17563cfd93e71c33d0388df0 333 PIRSF PIRSF006232 18 304 5.8E-73 T 13-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 RPIT_03695 deeeab1a17563cfd93e71c33d0388df0 333 SUPERFAMILY SSF51182 35 303 6.51E-64 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily RPIT_03695 deeeab1a17563cfd93e71c33d0388df0 333 Pfam PF02678 Pirin 41 141 1.5E-28 T 13-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 RPIT_03695 deeeab1a17563cfd93e71c33d0388df0 333 Gene3D G3DSA:2.60.120.10 30 267 1.5E-56 T 13-10-2018 IPR014710 RmlC-like jelly roll fold RPIT_03695 deeeab1a17563cfd93e71c33d0388df0 333 Pfam PF05726 Pirin C-terminal cupin domain 193 291 4.3E-14 T 13-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 RPIT_01220 1c3ac640d6892ec3e403dc18cd03415b 470 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 3.9E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_01220 1c3ac640d6892ec3e403dc18cd03415b 470 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 3.9E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_01220 1c3ac640d6892ec3e403dc18cd03415b 470 SUPERFAMILY SSF46785 14 83 8.85E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_01220 1c3ac640d6892ec3e403dc18cd03415b 470 SMART SM00345 22 81 3.0E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_01220 1c3ac640d6892ec3e403dc18cd03415b 470 Gene3D G3DSA:1.10.10.10 7 87 9.1E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_01220 1c3ac640d6892ec3e403dc18cd03415b 470 SUPERFAMILY SSF53383 106 465 1.59E-53 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_01220 1c3ac640d6892ec3e403dc18cd03415b 470 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 81 5.1E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_01220 1c3ac640d6892ec3e403dc18cd03415b 470 Gene3D G3DSA:3.40.640.10 104 460 2.3E-74 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_03255 acc6c1609038299d1c30a64cd1916d09 303 Gene3D G3DSA:1.10.3720.10 58 300 1.1E-62 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_03255 acc6c1609038299d1c30a64cd1916d09 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 294 8.9E-14 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_03255 acc6c1609038299d1c30a64cd1916d09 303 SUPERFAMILY SSF161098 62 288 6.8E-53 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_04735 6e95ba849096e46886ad91fc8ceedc5a 321 Pfam PF00490 Delta-aminolevulinic acid dehydratase 4 319 4.6E-133 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RPIT_04735 6e95ba849096e46886ad91fc8ceedc5a 321 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 239 251 - T 13-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RPIT_04735 6e95ba849096e46886ad91fc8ceedc5a 321 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 294 313 1.3E-55 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RPIT_04735 6e95ba849096e46886ad91fc8ceedc5a 321 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 188 207 1.3E-55 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RPIT_04735 6e95ba849096e46886ad91fc8ceedc5a 321 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 150 169 1.3E-55 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RPIT_04735 6e95ba849096e46886ad91fc8ceedc5a 321 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 264 279 1.3E-55 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RPIT_04735 6e95ba849096e46886ad91fc8ceedc5a 321 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 119 133 1.3E-55 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RPIT_04735 6e95ba849096e46886ad91fc8ceedc5a 321 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 239 255 1.3E-55 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RPIT_04735 6e95ba849096e46886ad91fc8ceedc5a 321 PIRSF PIRSF001415 1 321 8.7E-139 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RPIT_04735 6e95ba849096e46886ad91fc8ceedc5a 321 Gene3D G3DSA:3.20.20.70 1 321 2.2E-134 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_04735 6e95ba849096e46886ad91fc8ceedc5a 321 SMART SM01004 1 320 4.5E-202 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RPIT_04735 6e95ba849096e46886ad91fc8ceedc5a 321 SUPERFAMILY SSF51569 3 320 1.08E-124 T 13-10-2018 RPIT_01440 a104f73e53dcfdeb60aad1ec46347dca 349 Gene3D G3DSA:3.20.20.100 15 347 2.5E-113 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily RPIT_01440 a104f73e53dcfdeb60aad1ec46347dca 349 SUPERFAMILY SSF51430 13 331 4.85E-91 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily RPIT_01440 a104f73e53dcfdeb60aad1ec46347dca 349 Pfam PF00248 Aldo/keto reductase family 28 332 3.5E-67 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain RPIT_02345 1763e8d7353b168a86d5bc4e0c0964dc 176 SUPERFAMILY SSF53218 6 162 7.98E-38 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily RPIT_02345 1763e8d7353b168a86d5bc4e0c0964dc 176 Gene3D G3DSA:3.40.980.10 2 164 6.6E-49 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily RPIT_02345 1763e8d7353b168a86d5bc4e0c0964dc 176 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 6 150 8.2E-28 T 13-10-2018 IPR001453 MoaB/Mog domain RPIT_02345 1763e8d7353b168a86d5bc4e0c0964dc 176 SMART SM00852 9 157 6.1E-24 T 13-10-2018 IPR001453 MoaB/Mog domain RPIT_02345 1763e8d7353b168a86d5bc4e0c0964dc 176 Pfam PF00994 Probable molybdopterin binding domain 9 156 4.8E-32 T 13-10-2018 IPR001453 MoaB/Mog domain RPIT_11980 b863199adca5d511c1762723e67d2f5f 439 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 378 7.8E-40 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 RPIT_06365 4117560c86eba3f6b635f528bbaad914 202 PIRSF PIRSF000495 2 202 2.1E-60 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 RPIT_06365 4117560c86eba3f6b635f528bbaad914 202 Pfam PF00117 Glutamine amidotransferase class-I 6 192 1.8E-16 T 13-10-2018 IPR017926 Glutamine amidotransferase RPIT_06365 4117560c86eba3f6b635f528bbaad914 202 SUPERFAMILY SSF52317 3 200 3.15E-49 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_06365 4117560c86eba3f6b635f528bbaad914 202 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 201 31.92 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 RPIT_06365 4117560c86eba3f6b635f528bbaad914 202 Gene3D G3DSA:3.40.50.880 1 202 1.2E-62 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_06365 4117560c86eba3f6b635f528bbaad914 202 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 200 4.5E-56 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 RPIT_04965 6805fe1d1ee451c6c222a72551126c40 334 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 329 5.4E-85 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RPIT_04965 6805fe1d1ee451c6c222a72551126c40 334 Pfam PF01628 HrcA protein C terminal domain 103 317 3.0E-52 T 13-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 RPIT_04965 6805fe1d1ee451c6c222a72551126c40 334 Gene3D G3DSA:3.30.450.40 104 329 9.0E-33 T 13-10-2018 IPR029016 GAF-like domain superfamily RPIT_04965 6805fe1d1ee451c6c222a72551126c40 334 PIRSF PIRSF005485 1 333 5.9E-98 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RPIT_04965 6805fe1d1ee451c6c222a72551126c40 334 Pfam PF08220 DeoR-like helix-turn-helix domain 16 62 9.3E-5 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIT_04965 6805fe1d1ee451c6c222a72551126c40 334 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 324 26.28 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RPIT_04965 6805fe1d1ee451c6c222a72551126c40 334 SUPERFAMILY SSF55781 71 332 1.29E-46 T 13-10-2018 RPIT_04965 6805fe1d1ee451c6c222a72551126c40 334 Gene3D G3DSA:3.30.390.60 127 227 9.0E-33 T 13-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily RPIT_04965 6805fe1d1ee451c6c222a72551126c40 334 Gene3D G3DSA:1.10.10.10 1 84 6.9E-34 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_04965 6805fe1d1ee451c6c222a72551126c40 334 SUPERFAMILY SSF46785 1 82 4.65E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_08230 862ce33d52f1690ea9dc966547aa9646 443 Pfam PF07690 Major Facilitator Superfamily 250 418 1.1E-10 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIT_08230 862ce33d52f1690ea9dc966547aa9646 443 Pfam PF07690 Major Facilitator Superfamily 20 211 6.2E-15 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIT_08230 862ce33d52f1690ea9dc966547aa9646 443 Gene3D G3DSA:1.20.1250.20 15 206 9.5E-12 T 13-10-2018 RPIT_08230 862ce33d52f1690ea9dc966547aa9646 443 SUPERFAMILY SSF103473 18 416 4.62E-32 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_08230 862ce33d52f1690ea9dc966547aa9646 443 Gene3D G3DSA:1.20.1250.20 222 421 3.2E-15 T 13-10-2018 RPIT_09780 367794f7ff661c7da081ad272935c9ac 516 Pfam PF00005 ABC transporter 28 175 2.0E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_09780 367794f7ff661c7da081ad272935c9ac 516 SUPERFAMILY SSF52540 262 489 6.85E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_09780 367794f7ff661c7da081ad272935c9ac 516 SMART SM00382 287 489 0.5 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_09780 367794f7ff661c7da081ad272935c9ac 516 SMART SM00382 35 223 8.4E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_09780 367794f7ff661c7da081ad272935c9ac 516 SUPERFAMILY SSF52540 6 231 1.04E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_09780 367794f7ff661c7da081ad272935c9ac 516 Pfam PF00005 ABC transporter 279 432 7.7E-16 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_09780 367794f7ff661c7da081ad272935c9ac 516 Gene3D G3DSA:3.40.50.300 246 498 2.0E-43 T 13-10-2018 RPIT_09780 367794f7ff661c7da081ad272935c9ac 516 Gene3D G3DSA:3.40.50.300 1 245 1.6E-52 T 13-10-2018 RPIT_09780 367794f7ff661c7da081ad272935c9ac 516 ProSitePatterns PS00211 ABC transporters family signature. 405 419 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_14115 dc0e039dbc639227fb21101310b20057 1840 SUPERFAMILY SSF56059 91 337 1.94E-61 T 13-10-2018 RPIT_14115 dc0e039dbc639227fb21101310b20057 1840 SUPERFAMILY SSF51246 338 441 7.32E-31 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 RPIT_14115 dc0e039dbc639227fb21101310b20057 1840 SUPERFAMILY SSF52440 2 121 2.49E-33 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily RPIT_14115 dc0e039dbc639227fb21101310b20057 1840 Gene3D G3DSA:3.90.226.10 1268 1517 2.2E-37 T 13-10-2018 RPIT_14115 dc0e039dbc639227fb21101310b20057 1840 SUPERFAMILY SSF51230 595 671 1.57E-15 T 13-10-2018 IPR011053 Single hybrid motif RPIT_14115 dc0e039dbc639227fb21101310b20057 1840 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 161 175 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIT_14115 dc0e039dbc639227fb21101310b20057 1840 Pfam PF00364 Biotin-requiring enzyme 605 670 1.1E-11 T 13-10-2018 IPR000089 Biotin/lipoyl attachment RPIT_14115 dc0e039dbc639227fb21101310b20057 1840 SUPERFAMILY SSF52096 1303 1504 1.31E-22 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily RPIT_14115 dc0e039dbc639227fb21101310b20057 1840 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 123 332 1.2E-61 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIT_14115 dc0e039dbc639227fb21101310b20057 1840 Pfam PF02785 Biotin carboxylase C-terminal domain 342 440 1.7E-31 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RPIT_14115 dc0e039dbc639227fb21101310b20057 1840 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 118 2.7E-33 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RPIT_14115 dc0e039dbc639227fb21101310b20057 1840 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 295 302 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIT_14115 dc0e039dbc639227fb21101310b20057 1840 Pfam PF08326 Acetyl-CoA carboxylase, central region 1064 1216 1.8E-6 T 13-10-2018 IPR013537 Acetyl-CoA carboxylase, central domain GO:0003989|GO:0005524|GO:0006633 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-163765|Reactome: R-HSA-196780|Reactome: R-HSA-200425|Reactome: R-HSA-2426168 RPIT_14115 dc0e039dbc639227fb21101310b20057 1840 Gene3D G3DSA:3.30.470.130 1 449 1.5E-167 T 13-10-2018 RPIT_14115 dc0e039dbc639227fb21101310b20057 1840 SMART SM00878 342 444 5.2E-42 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RPIT_14115 dc0e039dbc639227fb21101310b20057 1840 Gene3D G3DSA:2.40.50.100 604 672 4.6E-16 T 13-10-2018 RPIT_14115 dc0e039dbc639227fb21101310b20057 1840 Pfam PF01039 Carboxyl transferase domain 1346 1833 4.6E-36 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 RPIT_14115 dc0e039dbc639227fb21101310b20057 1840 SUPERFAMILY SSF52096 1530 1836 1.63E-36 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily RPIT_09560 9da1dd82ddb4c1b94936d6f917674383 142 PIRSF PIRSF001399 1 142 4.4E-53 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RPIT_09560 9da1dd82ddb4c1b94936d6f917674383 142 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 142 55.055 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RPIT_09560 9da1dd82ddb4c1b94936d6f917674383 142 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 13-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RPIT_09560 9da1dd82ddb4c1b94936d6f917674383 142 SUPERFAMILY SSF52304 2 139 2.49E-48 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RPIT_09560 9da1dd82ddb4c1b94936d6f917674383 142 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 136 2.0E-34 T 13-10-2018 RPIT_09560 9da1dd82ddb4c1b94936d6f917674383 142 Gene3D G3DSA:3.40.50.9100 1 142 1.1E-52 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RPIT_09560 9da1dd82ddb4c1b94936d6f917674383 142 Pfam PF01220 Dehydroquinase class II 3 138 1.3E-49 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RPIT_14145 920977cdafa55724ccd4a85691056ebc 667 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 5 410 1.6E-74 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 RPIT_14145 920977cdafa55724ccd4a85691056ebc 667 Gene3D G3DSA:1.20.1720.10 6 189 2.1E-45 T 13-10-2018 RPIT_14145 920977cdafa55724ccd4a85691056ebc 667 ProSitePatterns PS00216 Sugar transport proteins signature 1. 57 73 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIT_14145 920977cdafa55724ccd4a85691056ebc 667 SUPERFAMILY SSF103473 3 497 9.02E-70 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_14145 920977cdafa55724ccd4a85691056ebc 667 Pfam PF07690 Major Facilitator Superfamily 8 399 1.4E-51 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIT_13730 8688ba4b0aac54d0059746c0db75cd11 642 SUPERFAMILY SSF52540 16 175 2.18E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_13730 8688ba4b0aac54d0059746c0db75cd11 642 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 40 58 3.6E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_13730 8688ba4b0aac54d0059746c0db75cd11 642 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 111 129 3.6E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_13730 8688ba4b0aac54d0059746c0db75cd11 642 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 19 39 3.6E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_13730 8688ba4b0aac54d0059746c0db75cd11 642 Pfam PF07670 Nucleoside recognition 290 383 2.0E-13 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 RPIT_13730 8688ba4b0aac54d0059746c0db75cd11 642 Pfam PF07670 Nucleoside recognition 460 613 4.5E-22 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 RPIT_13730 8688ba4b0aac54d0059746c0db75cd11 642 Pfam PF02421 Ferrous iron transport protein B 18 171 1.8E-43 T 13-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 RPIT_13730 8688ba4b0aac54d0059746c0db75cd11 642 Pfam PF07664 Ferrous iron transport protein B C terminus 402 454 1.0E-16 T 13-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 RPIT_13730 8688ba4b0aac54d0059746c0db75cd11 642 Gene3D G3DSA:3.40.50.300 15 178 1.7E-37 T 13-10-2018 RPIT_12945 c0802a1456cc0c99b36ed44f5147119a 462 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 462 86.863 T 13-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RPIT_12945 c0802a1456cc0c99b36ed44f5147119a 462 Pfam PF10415 Fumarase C C-terminus 409 461 4.0E-21 T 13-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RPIT_12945 c0802a1456cc0c99b36ed44f5147119a 462 PRINTS PR00145 Argininosuccinate lyase family signature 318 334 9.4E-10 T 13-10-2018 RPIT_12945 c0802a1456cc0c99b36ed44f5147119a 462 PRINTS PR00145 Argininosuccinate lyase family signature 176 196 9.4E-10 T 13-10-2018 RPIT_12945 c0802a1456cc0c99b36ed44f5147119a 462 PRINTS PR00145 Argininosuccinate lyase family signature 134 156 9.4E-10 T 13-10-2018 RPIT_12945 c0802a1456cc0c99b36ed44f5147119a 462 Gene3D G3DSA:1.20.200.10 140 405 3.5E-111 T 13-10-2018 RPIT_12945 c0802a1456cc0c99b36ed44f5147119a 462 Pfam PF00206 Lyase 11 343 3.8E-107 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal RPIT_12945 c0802a1456cc0c99b36ed44f5147119a 462 SUPERFAMILY SSF48557 2 460 1.73E-153 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 RPIT_12945 c0802a1456cc0c99b36ed44f5147119a 462 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 460 3.9E-213 T 13-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RPIT_12945 c0802a1456cc0c99b36ed44f5147119a 462 PRINTS PR00149 Fumarate lyase superfamily signature 318 334 4.1E-35 T 13-10-2018 IPR000362 Fumarate lyase family RPIT_12945 c0802a1456cc0c99b36ed44f5147119a 462 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 4.1E-35 T 13-10-2018 IPR000362 Fumarate lyase family RPIT_12945 c0802a1456cc0c99b36ed44f5147119a 462 PRINTS PR00149 Fumarate lyase superfamily signature 181 199 4.1E-35 T 13-10-2018 IPR000362 Fumarate lyase family RPIT_12945 c0802a1456cc0c99b36ed44f5147119a 462 PRINTS PR00149 Fumarate lyase superfamily signature 272 299 4.1E-35 T 13-10-2018 IPR000362 Fumarate lyase family RPIT_12945 c0802a1456cc0c99b36ed44f5147119a 462 Gene3D G3DSA:1.10.40.30 409 462 1.2E-24 T 13-10-2018 RPIT_12945 c0802a1456cc0c99b36ed44f5147119a 462 ProSitePatterns PS00163 Fumarate lyases signature. 318 327 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 RPIT_12945 c0802a1456cc0c99b36ed44f5147119a 462 Gene3D G3DSA:1.10.275.10 1 139 3.3E-56 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal RPIT_05525 cd9ccac40ae2ae73486b06667a5b2256 219 Gene3D G3DSA:2.60.40.10 7 67 7.8E-15 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_05525 cd9ccac40ae2ae73486b06667a5b2256 219 Pfam PF05345 Putative Ig domain 15 50 1.6E-7 T 13-10-2018 IPR008009 Putative Ig RPIT_05525 cd9ccac40ae2ae73486b06667a5b2256 219 SUPERFAMILY SSF49313 14 63 1.29E-8 T 13-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 RPIT_06325 d313659c78539d9b5a61b920c7baad90 203 Gene3D G3DSA:1.10.150.20 66 132 2.4E-19 T 13-10-2018 RPIT_06325 d313659c78539d9b5a61b920c7baad90 203 Pfam PF07499 RuvA, C-terminal domain 152 200 8.8E-7 T 13-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RPIT_06325 d313659c78539d9b5a61b920c7baad90 203 SUPERFAMILY SSF46929 151 202 6.28E-6 T 13-10-2018 IPR036267 RuvA, C-terminal domain superfamily RPIT_06325 d313659c78539d9b5a61b920c7baad90 203 SMART SM00278 107 126 22.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RPIT_06325 d313659c78539d9b5a61b920c7baad90 203 SMART SM00278 72 91 100.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RPIT_06325 d313659c78539d9b5a61b920c7baad90 203 Pfam PF14520 Helix-hairpin-helix domain 71 129 1.2E-13 T 13-10-2018 RPIT_06325 d313659c78539d9b5a61b920c7baad90 203 Gene3D G3DSA:1.10.8.10 142 203 3.7E-13 T 13-10-2018 RPIT_06325 d313659c78539d9b5a61b920c7baad90 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 201 24.797 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RPIT_06325 d313659c78539d9b5a61b920c7baad90 203 SUPERFAMILY SSF47781 65 132 1.33E-16 T 13-10-2018 IPR010994 RuvA domain 2-like RPIT_06325 d313659c78539d9b5a61b920c7baad90 203 SUPERFAMILY SSF50249 1 62 9.14E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_06325 d313659c78539d9b5a61b920c7baad90 203 Pfam PF01330 RuvA N terminal domain 1 61 8.3E-20 T 13-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 RPIT_06325 d313659c78539d9b5a61b920c7baad90 203 Gene3D G3DSA:2.40.50.140 1 65 1.0E-25 T 13-10-2018 RPIT_05055 5eedf563d2c0c7c86ebde50fe5517487 240 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 189 6.3E-33 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RPIT_05055 5eedf563d2c0c7c86ebde50fe5517487 240 SUPERFAMILY SSF50249 3 78 2.4E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_05055 5eedf563d2c0c7c86ebde50fe5517487 240 Gene3D G3DSA:1.20.1440.120 88 215 8.7E-16 T 13-10-2018 RPIT_05055 5eedf563d2c0c7c86ebde50fe5517487 240 Gene3D G3DSA:2.40.50.140 2 83 4.7E-28 T 13-10-2018 RPIT_05055 5eedf563d2c0c7c86ebde50fe5517487 240 Pfam PF11967 Recombination protein O N terminal 4 78 4.3E-26 T 13-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal RPIT_05055 5eedf563d2c0c7c86ebde50fe5517487 240 SUPERFAMILY SSF57863 82 230 1.41E-29 T 13-10-2018 IPR037278 ARFGAP/RecO-like zinc finger RPIT_05055 5eedf563d2c0c7c86ebde50fe5517487 240 Pfam PF02565 Recombination protein O C terminal 85 236 7.7E-21 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RPIT_05055 5eedf563d2c0c7c86ebde50fe5517487 240 Hamap MF_00201 DNA repair protein RecO [recO]. 2 238 23.582 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RPIT_05055 5eedf563d2c0c7c86ebde50fe5517487 240 Gene3D G3DSA:3.30.60.100 149 185 8.7E-16 T 13-10-2018 RPIT_06925 d36c984ca0c73632eb45ebbc2fa1c4b5 1004 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 2 1001 14.837 T 13-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 RPIT_06925 d36c984ca0c73632eb45ebbc2fa1c4b5 1004 SUPERFAMILY SSF52540 12 637 1.14E-82 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06925 d36c984ca0c73632eb45ebbc2fa1c4b5 1004 Gene3D G3DSA:3.90.320.10 688 1004 5.7E-74 T 13-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal RPIT_06925 d36c984ca0c73632eb45ebbc2fa1c4b5 1004 Gene3D G3DSA:3.40.50.300 9 156 7.0E-20 T 13-10-2018 RPIT_06925 d36c984ca0c73632eb45ebbc2fa1c4b5 1004 Pfam PF12705 PD-(D/E)XK nuclease superfamily 744 943 3.9E-6 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type RPIT_06925 d36c984ca0c73632eb45ebbc2fa1c4b5 1004 Pfam PF13361 UvrD-like helicase C-terminal domain 544 634 2.1E-11 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIT_06925 d36c984ca0c73632eb45ebbc2fa1c4b5 1004 Gene3D G3DSA:3.40.50.300 170 289 8.6E-23 T 13-10-2018 RPIT_06925 d36c984ca0c73632eb45ebbc2fa1c4b5 1004 Gene3D G3DSA:3.40.50.300 291 640 3.1E-52 T 13-10-2018 RPIT_06925 d36c984ca0c73632eb45ebbc2fa1c4b5 1004 SUPERFAMILY SSF52980 694 1001 1.45E-54 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RPIT_06925 d36c984ca0c73632eb45ebbc2fa1c4b5 1004 Pfam PF00580 UvrD/REP helicase N-terminal domain 171 282 2.5E-26 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 RPIT_06925 d36c984ca0c73632eb45ebbc2fa1c4b5 1004 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 108 3.1E-21 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 RPIT_06925 d36c984ca0c73632eb45ebbc2fa1c4b5 1004 Gene3D G3DSA:1.10.486.10 406 542 3.1E-52 T 13-10-2018 RPIT_10385 d380a8fc3572b2fdc24e1160009b7c2b 187 PIRSF PIRSF000190 137 184 5.1E-7 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RPIT_10385 d380a8fc3572b2fdc24e1160009b7c2b 187 PIRSF PIRSF000190 18 139 6.9E-33 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RPIT_10385 d380a8fc3572b2fdc24e1160009b7c2b 187 Gene3D G3DSA:2.30.110.10 138 183 2.2E-5 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 RPIT_10385 d380a8fc3572b2fdc24e1160009b7c2b 187 SUPERFAMILY SSF50475 20 180 6.55E-38 T 13-10-2018 RPIT_10385 d380a8fc3572b2fdc24e1160009b7c2b 187 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 144 178 1.8E-5 T 13-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RPIT_10385 d380a8fc3572b2fdc24e1160009b7c2b 187 Gene3D G3DSA:2.30.110.10 18 137 2.0E-33 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 RPIT_10385 d380a8fc3572b2fdc24e1160009b7c2b 187 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 40 125 4.2E-17 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 PRINTS PR00046 Major sigma-70 factor signature 385 397 3.7E-29 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 PRINTS PR00046 Major sigma-70 factor signature 237 250 3.7E-29 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 PRINTS PR00046 Major sigma-70 factor signature 261 269 3.7E-29 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 PRINTS PR00046 Major sigma-70 factor signature 421 432 3.7E-29 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 PRINTS PR00046 Major sigma-70 factor signature 406 421 3.7E-29 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 209 445 2.4E-112 T 13-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 237 250 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 Gene3D G3DSA:1.10.10.10 286 361 2.5E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 209 434 2.7E-36 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 Gene3D G3DSA:1.10.10.10 374 446 5.9E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 SUPERFAMILY SSF88659 344 445 2.83E-27 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 SUPERFAMILY SSF88946 144 283 1.23E-52 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 SUPERFAMILY SSF88659 286 359 2.99E-20 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 Pfam PF04545 Sigma-70, region 4 381 434 2.7E-18 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 Pfam PF00140 Sigma-70 factor, region 1.2 147 180 5.4E-14 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 Gene3D G3DSA:1.10.601.10 145 185 3.8E-8 T 13-10-2018 RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 Gene3D G3DSA:1.10.601.10 186 285 7.0E-51 T 13-10-2018 RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 48 446 30.974 T 13-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 Pfam PF04539 Sigma-70 region 3 292 368 2.6E-28 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 406 432 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 RPIT_06955 a905becd64ffe1cf583cf9ed5f3e1a6a 446 Pfam PF04542 Sigma-70 region 2 213 282 6.1E-22 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_08790 f0454450230d27dd1b81ef83d130c14c 1067 Pfam PF03572 Peptidase family S41 868 1024 1.7E-22 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 RPIT_08790 f0454450230d27dd1b81ef83d130c14c 1067 SMART SM00245 821 1025 1.8E-20 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 RPIT_08790 f0454450230d27dd1b81ef83d130c14c 1067 Pfam PF14685 Tricorn protease PDZ domain 754 839 2.2E-18 T 13-10-2018 IPR029414 Tricorn protease, PDZ domain RPIT_08790 f0454450230d27dd1b81ef83d130c14c 1067 Pfam PF14684 Tricorn protease C1 domain 673 740 1.2E-28 T 13-10-2018 IPR028204 Tricorn protease C1 domain RPIT_08790 f0454450230d27dd1b81ef83d130c14c 1067 Gene3D G3DSA:2.120.10.60 1 271 1.2E-70 T 13-10-2018 RPIT_08790 f0454450230d27dd1b81ef83d130c14c 1067 SUPERFAMILY SSF69304 6 258 8.76E-24 T 13-10-2018 RPIT_08790 f0454450230d27dd1b81ef83d130c14c 1067 Pfam PF07676 WD40-like Beta Propeller Repeat 45 67 1.2E-4 T 13-10-2018 IPR011659 WD40-like Beta Propeller RPIT_08790 f0454450230d27dd1b81ef83d130c14c 1067 Pfam PF07676 WD40-like Beta Propeller Repeat 457 489 1.6E-4 T 13-10-2018 IPR011659 WD40-like Beta Propeller RPIT_08790 f0454450230d27dd1b81ef83d130c14c 1067 SUPERFAMILY SSF52096 671 1050 7.62E-62 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily RPIT_08790 f0454450230d27dd1b81ef83d130c14c 1067 SUPERFAMILY SSF69322 290 637 4.18E-19 T 13-10-2018 RPIT_08790 f0454450230d27dd1b81ef83d130c14c 1067 SUPERFAMILY SSF50156 753 841 1.73E-13 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 RPIT_08790 f0454450230d27dd1b81ef83d130c14c 1067 PIRSF PIRSF036421 1 1058 5.0E-282 T 13-10-2018 IPR012393 Tricorn protease GO:0008236 RPIT_08790 f0454450230d27dd1b81ef83d130c14c 1067 Gene3D G3DSA:2.130.10.10 290 661 1.8E-84 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 RPIT_08790 f0454450230d27dd1b81ef83d130c14c 1067 Gene3D G3DSA:2.30.42.10 777 849 2.9E-7 T 13-10-2018 RPIT_08790 f0454450230d27dd1b81ef83d130c14c 1067 Gene3D G3DSA:3.90.226.10 850 1061 7.0E-60 T 13-10-2018 RPIT_08790 f0454450230d27dd1b81ef83d130c14c 1067 Gene3D G3DSA:3.30.750.44 672 740 2.3E-27 T 13-10-2018 RPIT_12620 3178067054238ac5467a9998641f423b 389 Pfam PF12832 MFS_1 like family 16 364 1.1E-18 T 13-10-2018 IPR024989 Major facilitator superfamily associated domain RPIT_12620 3178067054238ac5467a9998641f423b 389 Gene3D G3DSA:1.20.1250.20 4 186 2.9E-5 T 13-10-2018 RPIT_12620 3178067054238ac5467a9998641f423b 389 Gene3D G3DSA:1.20.1250.20 202 388 3.2E-24 T 13-10-2018 RPIT_12620 3178067054238ac5467a9998641f423b 389 SUPERFAMILY SSF103473 126 384 5.14E-25 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_12620 3178067054238ac5467a9998641f423b 389 SUPERFAMILY SSF103473 7 183 5.75E-6 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_12140 a598367327661aebbd396b4e2b0049b1 238 Pfam PF00072 Response regulator receiver domain 14 123 2.3E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_12140 a598367327661aebbd396b4e2b0049b1 238 Gene3D G3DSA:3.40.50.2300 2 138 3.1E-38 T 13-10-2018 RPIT_12140 a598367327661aebbd396b4e2b0049b1 238 SMART SM00862 159 233 8.7E-27 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_12140 a598367327661aebbd396b4e2b0049b1 238 SMART SM00448 12 123 1.2E-41 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_12140 a598367327661aebbd396b4e2b0049b1 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 233 6.8E-26 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_12140 a598367327661aebbd396b4e2b0049b1 238 SUPERFAMILY SSF52172 10 189 2.2E-42 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_12140 a598367327661aebbd396b4e2b0049b1 238 Gene3D G3DSA:1.10.10.10 139 238 2.1E-34 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_01370 d8ebb89f799d80dddfe90081a3c0434c 202 SUPERFAMILY SSF55811 23 174 8.12E-21 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 RPIT_01370 d8ebb89f799d80dddfe90081a3c0434c 202 Gene3D G3DSA:3.90.79.10 11 178 1.7E-33 T 13-10-2018 RPIT_01370 d8ebb89f799d80dddfe90081a3c0434c 202 Pfam PF00293 NUDIX domain 25 139 1.3E-9 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 RPIT_10310 c627facd2c110d9c21b11bc4ef6ac777 136 Pfam PF00293 NUDIX domain 7 117 9.6E-14 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 RPIT_10310 c627facd2c110d9c21b11bc4ef6ac777 136 Gene3D G3DSA:3.90.79.10 1 133 1.3E-22 T 13-10-2018 RPIT_10310 c627facd2c110d9c21b11bc4ef6ac777 136 SUPERFAMILY SSF55811 3 128 4.74E-22 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 SUPERFAMILY SSF51905 156 313 8.13E-28 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 771 2.0E-18 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 561 622 5.8E-11 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 Gene3D G3DSA:3.30.413.10 639 763 1.1E-30 T 13-10-2018 RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 291 3.5E-52 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 SUPERFAMILY SSF55124 505 642 3.93E-26 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 PIRSF PIRSF037149 1 837 0.0 T 13-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 Gene3D G3DSA:3.50.50.60 109 251 2.9E-84 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 SUPERFAMILY SSF51905 5 195 1.39E-40 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 Gene3D G3DSA:3.90.480.10 566 638 3.7E-6 T 13-10-2018 RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 Gene3D G3DSA:1.10.10.1100 423 478 7.6E-10 T 13-10-2018 RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 Gene3D G3DSA:3.50.50.60 6 288 2.9E-84 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 6.4E-17 T 13-10-2018 RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 6.4E-17 T 13-10-2018 RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 255 6.4E-17 T 13-10-2018 RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 6.4E-17 T 13-10-2018 RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 802 0.0 T 13-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 2.5E-6 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 2.5E-6 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 SUPERFAMILY SSF56014 634 808 1.23E-49 T 13-10-2018 RPIT_10890 cba526ab9f19eb4caa596f257d45f47b 866 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 471 6.0E-11 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain RPIT_07150 51b6f8623065f81325e759c016ed7631 176 Gene3D G3DSA:3.40.430.10 3 173 3.7E-30 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 RPIT_07150 51b6f8623065f81325e759c016ed7631 176 SUPERFAMILY SSF53597 3 175 1.7E-23 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 RPIT_07150 51b6f8623065f81325e759c016ed7631 176 Pfam PF01872 RibD C-terminal domain 3 168 7.3E-14 T 13-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 RPIT_11215 4a2d20ff9c7ad961d975fc16577908e1 393 SUPERFAMILY SSF51182 1 385 2.45E-85 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily RPIT_11215 4a2d20ff9c7ad961d975fc16577908e1 393 Gene3D G3DSA:2.60.120.10 304 384 7.6E-114 T 13-10-2018 IPR014710 RmlC-like jelly roll fold RPIT_11215 4a2d20ff9c7ad961d975fc16577908e1 393 Gene3D G3DSA:1.10.441.10 145 303 7.6E-114 T 13-10-2018 RPIT_11215 4a2d20ff9c7ad961d975fc16577908e1 393 PRINTS PR00714 Phosphomannose isomerase type I signature 31 46 1.0E-55 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11215 4a2d20ff9c7ad961d975fc16577908e1 393 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 1.0E-55 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11215 4a2d20ff9c7ad961d975fc16577908e1 393 PRINTS PR00714 Phosphomannose isomerase type I signature 239 258 1.0E-55 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11215 4a2d20ff9c7ad961d975fc16577908e1 393 PRINTS PR00714 Phosphomannose isomerase type I signature 76 97 1.0E-55 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11215 4a2d20ff9c7ad961d975fc16577908e1 393 PRINTS PR00714 Phosphomannose isomerase type I signature 277 296 1.0E-55 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11215 4a2d20ff9c7ad961d975fc16577908e1 393 PRINTS PR00714 Phosphomannose isomerase type I signature 223 238 1.0E-55 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11215 4a2d20ff9c7ad961d975fc16577908e1 393 PRINTS PR00714 Phosphomannose isomerase type I signature 121 144 1.0E-55 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11215 4a2d20ff9c7ad961d975fc16577908e1 393 PRINTS PR00714 Phosphomannose isomerase type I signature 258 277 1.0E-55 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11215 4a2d20ff9c7ad961d975fc16577908e1 393 Gene3D G3DSA:2.60.120.10 7 278 7.6E-114 T 13-10-2018 IPR014710 RmlC-like jelly roll fold RPIT_11215 4a2d20ff9c7ad961d975fc16577908e1 393 Pfam PF01238 Phosphomannose isomerase type I 2 355 2.4E-52 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11215 4a2d20ff9c7ad961d975fc16577908e1 393 PIRSF PIRSF001480 1 393 1.6E-89 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11215 4a2d20ff9c7ad961d975fc16577908e1 393 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 7 389 3.8E-60 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_10145 debfa39d6c5550f4807c9be3fe770ed6 475 Pfam PF13490 Putative zinc-finger 6 40 1.7E-7 T 13-10-2018 IPR027383 Putative zinc-finger RPIT_10145 debfa39d6c5550f4807c9be3fe770ed6 475 Gene3D G3DSA:2.50.20.10 191 341 1.9E-8 T 13-10-2018 RPIT_10145 debfa39d6c5550f4807c9be3fe770ed6 475 Gene3D G3DSA:1.10.10.1320 7 67 4.1E-6 T 13-10-2018 RPIT_11835 3b081c6cc2d67ce51579c3ae64dea969 266 PIRSF PIRSF000513 1 266 1.4E-78 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RPIT_11835 3b081c6cc2d67ce51579c3ae64dea969 266 Pfam PF02110 Hydroxyethylthiazole kinase family 7 254 2.0E-71 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RPIT_11835 3b081c6cc2d67ce51579c3ae64dea969 266 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 159 176 1.6E-31 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RPIT_11835 3b081c6cc2d67ce51579c3ae64dea969 266 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 85 102 1.6E-31 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RPIT_11835 3b081c6cc2d67ce51579c3ae64dea969 266 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 28 49 1.6E-31 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RPIT_11835 3b081c6cc2d67ce51579c3ae64dea969 266 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 15 22 1.6E-31 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RPIT_11835 3b081c6cc2d67ce51579c3ae64dea969 266 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 115 129 1.6E-31 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RPIT_11835 3b081c6cc2d67ce51579c3ae64dea969 266 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 59 67 1.6E-31 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RPIT_11835 3b081c6cc2d67ce51579c3ae64dea969 266 Gene3D G3DSA:3.40.1190.20 1 264 5.7E-83 T 13-10-2018 IPR029056 Ribokinase-like RPIT_11835 3b081c6cc2d67ce51579c3ae64dea969 266 SUPERFAMILY SSF53613 6 260 4.7E-56 T 13-10-2018 IPR029056 Ribokinase-like RPIT_11835 3b081c6cc2d67ce51579c3ae64dea969 266 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 9 258 29.531 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RPIT_12380 256d7ec9428b31044da6769cd929c9be 425 Pfam PF02371 Transposase IS116/IS110/IS902 family 264 342 5.6E-20 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RPIT_12380 256d7ec9428b31044da6769cd929c9be 425 Pfam PF01548 Transposase 9 157 6.6E-24 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RPIT_01255 256d7ec9428b31044da6769cd929c9be 425 Pfam PF02371 Transposase IS116/IS110/IS902 family 264 342 5.6E-20 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RPIT_01255 256d7ec9428b31044da6769cd929c9be 425 Pfam PF01548 Transposase 9 157 6.6E-24 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RPIT_05590 4a0542741b73b632a7f39b59f5fc6188 226 Pfam PF02080 TrkA-C domain 149 216 1.8E-10 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RPIT_05590 4a0542741b73b632a7f39b59f5fc6188 226 PRINTS PR00335 TrkA potassium uptake protein signature 59 69 1.1E-7 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RPIT_05590 4a0542741b73b632a7f39b59f5fc6188 226 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.1E-7 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RPIT_05590 4a0542741b73b632a7f39b59f5fc6188 226 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.1E-7 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RPIT_05590 4a0542741b73b632a7f39b59f5fc6188 226 PRINTS PR00335 TrkA potassium uptake protein signature 72 86 1.1E-7 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RPIT_05590 4a0542741b73b632a7f39b59f5fc6188 226 SUPERFAMILY SSF51735 1 143 1.76E-29 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_05590 4a0542741b73b632a7f39b59f5fc6188 226 SUPERFAMILY SSF116726 134 215 1.44E-12 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 RPIT_05590 4a0542741b73b632a7f39b59f5fc6188 226 Gene3D G3DSA:3.40.50.720 2 132 5.2E-30 T 13-10-2018 RPIT_05590 4a0542741b73b632a7f39b59f5fc6188 226 Pfam PF02254 TrkA-N domain 3 118 2.9E-24 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RPIT_05590 4a0542741b73b632a7f39b59f5fc6188 226 Gene3D G3DSA:3.30.70.1450 137 216 4.3E-12 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 RPIT_06035 5877b62a4bd8293b17b0a73baf7c5b66 555 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 328 339 - T 13-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 RPIT_06035 5877b62a4bd8293b17b0a73baf7c5b66 555 Pfam PF01268 Formate--tetrahydrofolate ligase 2 555 5.1E-255 T 13-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 RPIT_06035 5877b62a4bd8293b17b0a73baf7c5b66 555 SUPERFAMILY SSF52540 4 548 3.94E-236 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06035 5877b62a4bd8293b17b0a73baf7c5b66 555 Gene3D G3DSA:3.30.1510.10 129 247 1.4E-198 T 13-10-2018 RPIT_06035 5877b62a4bd8293b17b0a73baf7c5b66 555 Gene3D G3DSA:3.10.410.10 443 532 2.9E-31 T 13-10-2018 RPIT_06035 5877b62a4bd8293b17b0a73baf7c5b66 555 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 13-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 RPIT_06035 5877b62a4bd8293b17b0a73baf7c5b66 555 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 555 47.342 T 13-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 RPIT_06035 5877b62a4bd8293b17b0a73baf7c5b66 555 Gene3D G3DSA:3.40.50.300 4 426 1.4E-198 T 13-10-2018 RPIT_05075 8afc86465179ecad5f9a27b678bf0048 324 Gene3D G3DSA:3.40.50.1980 42 209 2.6E-31 T 13-10-2018 RPIT_05075 8afc86465179ecad5f9a27b678bf0048 324 Pfam PF01297 Zinc-uptake complex component A periplasmic 43 319 1.6E-52 T 13-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 RPIT_05075 8afc86465179ecad5f9a27b678bf0048 324 SUPERFAMILY SSF53807 42 320 2.11E-58 T 13-10-2018 RPIT_05075 8afc86465179ecad5f9a27b678bf0048 324 Gene3D G3DSA:3.40.50.1980 212 323 6.6E-33 T 13-10-2018 RPIT_13805 620b865796197e9aebb840db279f3136 386 Gene3D G3DSA:3.40.50.2000 77 370 3.6E-61 T 13-10-2018 RPIT_13805 620b865796197e9aebb840db279f3136 386 Pfam PF00534 Glycosyl transferases group 1 187 352 1.4E-33 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 RPIT_13805 620b865796197e9aebb840db279f3136 386 Gene3D G3DSA:3.40.50.2000 174 357 3.6E-61 T 13-10-2018 RPIT_13805 620b865796197e9aebb840db279f3136 386 SUPERFAMILY SSF53756 13 373 1.83E-67 T 13-10-2018 RPIT_13805 620b865796197e9aebb840db279f3136 386 Pfam PF13439 Glycosyltransferase Family 4 24 155 4.0E-8 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RPIT_06915 8c19fc00f9c7b1fd3edd30368e52af69 672 SMART SM00341 596 672 2.7E-12 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 RPIT_06915 8c19fc00f9c7b1fd3edd30368e52af69 672 Gene3D G3DSA:1.10.486.10 402 464 5.2E-27 T 13-10-2018 RPIT_06915 8c19fc00f9c7b1fd3edd30368e52af69 672 Gene3D G3DSA:1.10.10.160 105 187 2.4E-63 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily RPIT_06915 8c19fc00f9c7b1fd3edd30368e52af69 672 Gene3D G3DSA:3.40.50.300 7 269 2.4E-63 T 13-10-2018 RPIT_06915 8c19fc00f9c7b1fd3edd30368e52af69 672 Pfam PF13361 UvrD-like helicase C-terminal domain 276 388 5.4E-14 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIT_06915 8c19fc00f9c7b1fd3edd30368e52af69 672 Pfam PF00570 HRDC domain 600 666 1.9E-20 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 RPIT_06915 8c19fc00f9c7b1fd3edd30368e52af69 672 SUPERFAMILY SSF52540 4 539 2.0E-109 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06915 8c19fc00f9c7b1fd3edd30368e52af69 672 Pfam PF13245 AAA domain 11 254 2.9E-34 T 13-10-2018 RPIT_06915 8c19fc00f9c7b1fd3edd30368e52af69 672 SUPERFAMILY SSF47819 593 669 1.35E-21 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 RPIT_06915 8c19fc00f9c7b1fd3edd30368e52af69 672 Gene3D G3DSA:3.40.50.300 465 550 5.2E-27 T 13-10-2018 RPIT_06915 8c19fc00f9c7b1fd3edd30368e52af69 672 Gene3D G3DSA:1.10.486.10 379 389 6.3E-25 T 13-10-2018 RPIT_06915 8c19fc00f9c7b1fd3edd30368e52af69 672 Gene3D G3DSA:3.40.50.300 280 378 6.3E-25 T 13-10-2018 RPIT_06915 8c19fc00f9c7b1fd3edd30368e52af69 672 Gene3D G3DSA:1.10.150.80 589 671 6.9E-24 T 13-10-2018 RPIT_06915 8c19fc00f9c7b1fd3edd30368e52af69 672 Pfam PF13361 UvrD-like helicase C-terminal domain 431 536 1.2E-19 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIT_11395 5ec00cd7a87db0289d8217110e405010 318 Gene3D G3DSA:1.10.3720.10 61 306 2.1E-64 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_11395 5ec00cd7a87db0289d8217110e405010 318 SUPERFAMILY SSF161098 65 293 3.66E-57 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_11395 5ec00cd7a87db0289d8217110e405010 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 296 1.4E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_12955 5629c1d3795fbc1f90675aeea5c0e3cc 69 Pfam PF00403 Heavy-metal-associated domain 5 62 1.4E-15 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIT_12955 5629c1d3795fbc1f90675aeea5c0e3cc 69 PRINTS PR00944 Copper ion binding protein signature 2 14 5.0E-5 T 13-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 RPIT_12955 5629c1d3795fbc1f90675aeea5c0e3cc 69 PRINTS PR00944 Copper ion binding protein signature 27 40 5.0E-5 T 13-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 RPIT_12955 5629c1d3795fbc1f90675aeea5c0e3cc 69 PRINTS PR00944 Copper ion binding protein signature 14 27 5.0E-5 T 13-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 RPIT_12955 5629c1d3795fbc1f90675aeea5c0e3cc 69 PRINTS PR00944 Copper ion binding protein signature 52 65 5.0E-5 T 13-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 RPIT_12955 5629c1d3795fbc1f90675aeea5c0e3cc 69 SUPERFAMILY SSF55008 2 62 3.53E-16 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 RPIT_12955 5629c1d3795fbc1f90675aeea5c0e3cc 69 Gene3D G3DSA:3.30.70.100 3 68 1.7E-18 T 13-10-2018 RPIT_12955 5629c1d3795fbc1f90675aeea5c0e3cc 69 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RPIT_02205 1ffa9e35abe624263720ea47e69ee6e0 487 SUPERFAMILY SSF51261 349 479 1.99E-43 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_02205 1ffa9e35abe624263720ea47e69ee6e0 487 Pfam PF01551 Peptidase family M23 382 476 6.0E-29 T 13-10-2018 IPR016047 Peptidase M23 RPIT_02205 1ffa9e35abe624263720ea47e69ee6e0 487 Gene3D G3DSA:2.70.70.10 338 481 3.8E-39 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_13920 1e4b31ffecc3bdd5bb2a1b5c18b64a54 259 Gene3D G3DSA:3.40.50.720 51 209 2.4E-60 T 13-10-2018 RPIT_13920 1e4b31ffecc3bdd5bb2a1b5c18b64a54 259 Gene3D G3DSA:3.40.50.720 12 50 2.4E-60 T 13-10-2018 RPIT_13920 1e4b31ffecc3bdd5bb2a1b5c18b64a54 259 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 59 211 9.1E-45 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RPIT_13920 1e4b31ffecc3bdd5bb2a1b5c18b64a54 259 SUPERFAMILY SSF51735 51 210 1.18E-42 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_12975 d4948ce64d607f3da1f00001f37a4385 144 Gene3D G3DSA:3.40.30.10 1 105 1.2E-37 T 13-10-2018 RPIT_12975 d4948ce64d607f3da1f00001f37a4385 144 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 118 1.0E-37 T 13-10-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 RPIT_00265 0e9db428e25fbfd3d9efd6c46405be54 278 Gene3D G3DSA:3.90.70.10 116 272 2.3E-7 T 13-10-2018 RPIT_00265 0e9db428e25fbfd3d9efd6c46405be54 278 Pfam PF13529 Peptidase_C39 like family 113 247 1.1E-13 T 13-10-2018 IPR039564 Peptidase C39-like RPIT_13570 a808616ae68def63b10c8c2018f3d871 320 SUPERFAMILY SSF52540 64 317 1.03E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_13570 a808616ae68def63b10c8c2018f3d871 320 Gene3D G3DSA:3.40.50.300 60 319 4.5E-77 T 13-10-2018 RPIT_13570 a808616ae68def63b10c8c2018f3d871 320 Pfam PF13614 AAA domain 65 242 7.2E-53 T 13-10-2018 IPR025669 AAA domain RPIT_07430 3794a495cedc5999f10de024701b82a0 85 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 1 57 1.1E-14 T 13-10-2018 RPIT_04220 6b55fc3d5fa43b18c0c43aa5d7e8b1e0 259 Gene3D G3DSA:3.20.20.70 1 258 1.3E-102 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_04220 6b55fc3d5fa43b18c0c43aa5d7e8b1e0 259 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 256 58.542 T 13-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04220 6b55fc3d5fa43b18c0c43aa5d7e8b1e0 259 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 248 3.8E-56 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04220 6b55fc3d5fa43b18c0c43aa5d7e8b1e0 259 ProSitePatterns PS00171 Triosephosphate isomerase active site. 172 182 - T 13-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04220 6b55fc3d5fa43b18c0c43aa5d7e8b1e0 259 Pfam PF00121 Triosephosphate isomerase 6 254 4.1E-89 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04220 6b55fc3d5fa43b18c0c43aa5d7e8b1e0 259 SUPERFAMILY SSF51351 1 257 1.83E-90 T 13-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_05000 0a72f869366921bdeefa3ead4655ead4 153 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 152 20.599 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RPIT_05000 0a72f869366921bdeefa3ead4655ead4 153 Gene3D G3DSA:3.40.390.30 3 152 2.1E-34 T 13-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 RPIT_05000 0a72f869366921bdeefa3ead4655ead4 153 SUPERFAMILY SSF55486 10 147 6.35E-34 T 13-10-2018 RPIT_05000 0a72f869366921bdeefa3ead4655ead4 153 Pfam PF02130 Uncharacterized protein family UPF0054 21 143 1.0E-33 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RPIT_05000 0a72f869366921bdeefa3ead4655ead4 153 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 35 145 1.7E-28 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RPIT_05000 0a72f869366921bdeefa3ead4655ead4 153 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 115 125 - T 13-10-2018 IPR020549 Endoribonuclease YbeY, conserved site RPIT_10740 dc27a41979e6913639d97f1fd2123838 324 SUPERFAMILY SSF53271 76 311 4.18E-61 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like RPIT_10740 dc27a41979e6913639d97f1fd2123838 324 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 12 320 7.4E-117 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 RPIT_10740 dc27a41979e6913639d97f1fd2123838 324 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 135 150 - T 13-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 RPIT_10740 dc27a41979e6913639d97f1fd2123838 324 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 11 321 44.934 T 13-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 RPIT_10740 dc27a41979e6913639d97f1fd2123838 324 Pfam PF14572 Phosphoribosyl synthetase-associated domain 214 320 1.8E-24 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 RPIT_10740 dc27a41979e6913639d97f1fd2123838 324 Gene3D G3DSA:3.40.50.2020 14 308 2.0E-111 T 13-10-2018 RPIT_10740 dc27a41979e6913639d97f1fd2123838 324 SMART SM01400 11 127 3.8E-67 T 13-10-2018 RPIT_10740 dc27a41979e6913639d97f1fd2123838 324 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 11 127 6.6E-41 T 13-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 RPIT_10740 dc27a41979e6913639d97f1fd2123838 324 Gene3D G3DSA:3.40.50.2020 154 297 2.0E-111 T 13-10-2018 RPIT_07095 29ba89735c800a36f04dd82d34b26a8a 253 SUPERFAMILY SSF46785 4 55 1.88E-10 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_07095 29ba89735c800a36f04dd82d34b26a8a 253 SMART SM01134 66 228 4.9E-59 T 13-10-2018 RPIT_07095 29ba89735c800a36f04dd82d34b26a8a 253 SMART SM00420 3 52 2.1E-10 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIT_07095 29ba89735c800a36f04dd82d34b26a8a 253 Pfam PF08220 DeoR-like helix-turn-helix domain 4 51 1.2E-13 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIT_07095 29ba89735c800a36f04dd82d34b26a8a 253 Gene3D G3DSA:1.10.10.10 1 65 2.9E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_07095 29ba89735c800a36f04dd82d34b26a8a 253 Pfam PF00455 DeoR C terminal sensor domain 68 227 1.5E-46 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain RPIT_07095 29ba89735c800a36f04dd82d34b26a8a 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 32 50 4.8E-8 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIT_07095 29ba89735c800a36f04dd82d34b26a8a 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 18 32 4.8E-8 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIT_07095 29ba89735c800a36f04dd82d34b26a8a 253 SUPERFAMILY SSF100950 68 227 2.05E-27 T 13-10-2018 IPR037171 NagB/RpiA transferase-like RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 384 398 4.3E-29 T 13-10-2018 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 512 523 4.3E-29 T 13-10-2018 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 610 622 4.3E-29 T 13-10-2018 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 235 249 4.3E-29 T 13-10-2018 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 544 4.3E-29 T 13-10-2018 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 587 606 4.3E-29 T 13-10-2018 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 Pfam PF00122 E1-E2 ATPase 185 364 4.0E-48 T 13-10-2018 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 Gene3D G3DSA:2.70.150.20 179 290 3.8E-34 T 13-10-2018 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 PRINTS PR00943 Copper-transporting ATPase signature 107 126 1.4E-9 T 13-10-2018 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 PRINTS PR00943 Copper-transporting ATPase signature 621 635 1.4E-9 T 13-10-2018 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 PRINTS PR00943 Copper-transporting ATPase signature 564 581 1.4E-9 T 13-10-2018 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 PRINTS PR00943 Copper-transporting ATPase signature 178 196 1.4E-9 T 13-10-2018 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 PRINTS PR00943 Copper-transporting ATPase signature 660 674 1.4E-9 T 13-10-2018 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 PRINTS PR00943 Copper-transporting ATPase signature 367 382 1.4E-9 T 13-10-2018 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 SUPERFAMILY SSF81665 130 376 3.66E-12 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 SUPERFAMILY SSF56784 382 692 7.73E-55 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 Gene3D G3DSA:3.40.1110.10 395 519 2.3E-87 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 386 392 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 158 666 3.4E-84 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 Gene3D G3DSA:3.40.50.1000 365 638 2.3E-87 T 13-10-2018 IPR023214 HAD superfamily RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 SUPERFAMILY SSF81653 188 285 1.44E-25 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 122 694 1.3E-172 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 Pfam PF00702 haloacid dehalogenase-like hydrolase 380 600 5.8E-43 T 13-10-2018 RPIT_08445 4a9249649abfdfa104180abb97b88c42 711 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 104 696 4.2E-172 T 13-10-2018 RPIT_07010 b0f779da2b71d49e4815a40bc57472ef 265 Gene3D G3DSA:3.40.250.10 146 263 2.3E-32 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_07010 b0f779da2b71d49e4815a40bc57472ef 265 SUPERFAMILY SSF52821 3 142 5.89E-32 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_07010 b0f779da2b71d49e4815a40bc57472ef 265 SUPERFAMILY SSF52821 154 264 4.71E-30 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_07010 b0f779da2b71d49e4815a40bc57472ef 265 SMART SM00450 143 260 6.1E-12 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_07010 b0f779da2b71d49e4815a40bc57472ef 265 SMART SM00450 3 127 2.1E-18 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_07010 b0f779da2b71d49e4815a40bc57472ef 265 Pfam PF00581 Rhodanese-like domain 156 255 2.7E-9 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_07010 b0f779da2b71d49e4815a40bc57472ef 265 Pfam PF00581 Rhodanese-like domain 13 121 4.2E-14 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_07010 b0f779da2b71d49e4815a40bc57472ef 265 ProSitePatterns PS00380 Rhodanese signature 1. 35 46 - T 13-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 RPIT_07010 b0f779da2b71d49e4815a40bc57472ef 265 Gene3D G3DSA:3.40.250.10 2 144 5.7E-37 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_05015 f456ec551bc9c51060f65ec9b0b7971d 307 SUPERFAMILY SSF54814 188 307 7.19E-34 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 RPIT_05015 f456ec551bc9c51060f65ec9b0b7971d 307 Pfam PF07650 KH domain 214 296 1.1E-16 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_05015 f456ec551bc9c51060f65ec9b0b7971d 307 Gene3D G3DSA:3.40.50.300 3 190 6.3E-40 T 13-10-2018 RPIT_05015 f456ec551bc9c51060f65ec9b0b7971d 307 Hamap MF_00367 GTPase Era [era]. 5 307 33.152 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_05015 f456ec551bc9c51060f65ec9b0b7971d 307 TIGRFAM TIGR00436 era: GTP-binding protein Era 8 290 9.4E-68 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_05015 f456ec551bc9c51060f65ec9b0b7971d 307 Pfam PF01926 50S ribosome-binding GTPase 10 122 3.1E-18 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_05015 f456ec551bc9c51060f65ec9b0b7971d 307 SUPERFAMILY SSF52540 11 221 2.08E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_05015 f456ec551bc9c51060f65ec9b0b7971d 307 Gene3D G3DSA:3.30.300.20 191 307 1.4E-38 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta RPIT_05015 f456ec551bc9c51060f65ec9b0b7971d 307 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 173 2.6E-17 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RPIT_13905 6ae3f9108803f7d4b991f2a18695d74e 314 Gene3D G3DSA:1.20.1250.20 1 109 8.0E-8 T 13-10-2018 RPIT_13905 6ae3f9108803f7d4b991f2a18695d74e 314 Gene3D G3DSA:1.20.1250.20 113 303 4.5E-18 T 13-10-2018 RPIT_13905 6ae3f9108803f7d4b991f2a18695d74e 314 Pfam PF07690 Major Facilitator Superfamily 147 297 8.9E-11 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIT_13905 6ae3f9108803f7d4b991f2a18695d74e 314 SUPERFAMILY SSF103473 5 298 8.63E-28 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_12565 fb259d45910413fa122484061d7b325e 1290 Pfam PF07676 WD40-like Beta Propeller Repeat 117 132 0.13 T 13-10-2018 IPR011659 WD40-like Beta Propeller RPIT_12565 fb259d45910413fa122484061d7b325e 1290 SUPERFAMILY SSF55486 833 902 4.65E-7 T 13-10-2018 RPIT_12565 fb259d45910413fa122484061d7b325e 1290 Gene3D G3DSA:2.120.10.30 7 293 2.2E-17 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like RPIT_12565 fb259d45910413fa122484061d7b325e 1290 Gene3D G3DSA:3.40.390.10 801 912 2.1E-5 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 RPIT_12565 fb259d45910413fa122484061d7b325e 1290 SUPERFAMILY SSF82171 118 402 7.26E-19 T 13-10-2018 RPIT_03370 801fd728e5f4ac59db3d42b8398906f5 340 SUPERFAMILY SSF56553 48 169 3.66E-41 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_03370 801fd728e5f4ac59db3d42b8398906f5 340 Gene3D G3DSA:2.170.120.12 48 168 8.4E-80 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_03370 801fd728e5f4ac59db3d42b8398906f5 340 Gene3D G3DSA:3.30.1360.10 14 217 8.4E-80 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_03370 801fd728e5f4ac59db3d42b8398906f5 340 SMART SM00662 18 225 5.7E-84 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_03370 801fd728e5f4ac59db3d42b8398906f5 340 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 59 148 2.4E-23 T 13-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_03370 801fd728e5f4ac59db3d42b8398906f5 340 Gene3D G3DSA:1.10.150.20 220 330 3.6E-30 T 13-10-2018 RPIT_03370 801fd728e5f4ac59db3d42b8398906f5 340 SUPERFAMILY SSF47789 245 317 1.19E-24 T 13-10-2018 RPIT_03370 801fd728e5f4ac59db3d42b8398906f5 340 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 19 310 1.8E-111 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_03370 801fd728e5f4ac59db3d42b8398906f5 340 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 250 317 3.0E-27 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_03370 801fd728e5f4ac59db3d42b8398906f5 340 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 24 218 7.4E-18 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_03370 801fd728e5f4ac59db3d42b8398906f5 340 SUPERFAMILY SSF55257 15 220 5.49E-24 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_03370 801fd728e5f4ac59db3d42b8398906f5 340 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 242 301 1.7E-27 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_03370 801fd728e5f4ac59db3d42b8398906f5 340 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 311 34.158 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_14150 8de22f3160f414dffbd242fc7b2304ec 600 Pfam PF00664 ABC transporter transmembrane region 21 293 4.5E-36 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 RPIT_14150 8de22f3160f414dffbd242fc7b2304ec 600 Gene3D G3DSA:1.20.1560.10 1 327 3.3E-50 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_14150 8de22f3160f414dffbd242fc7b2304ec 600 SUPERFAMILY SSF90123 8 312 1.57E-53 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_14150 8de22f3160f414dffbd242fc7b2304ec 600 SMART SM00382 372 558 3.0E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_14150 8de22f3160f414dffbd242fc7b2304ec 600 Gene3D G3DSA:3.40.50.300 339 593 3.5E-86 T 13-10-2018 RPIT_14150 8de22f3160f414dffbd242fc7b2304ec 600 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_14150 8de22f3160f414dffbd242fc7b2304ec 600 SUPERFAMILY SSF52540 338 582 1.36E-83 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_14150 8de22f3160f414dffbd242fc7b2304ec 600 Pfam PF00005 ABC transporter 363 512 1.4E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_03100 4a394dd9ba754b51a49976ca67f08ee6 252 Pfam PF01925 Sulfite exporter TauE/SafE 7 243 1.1E-47 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIT_13260 95b14b7db50ffe5985ccfc617c88d76d 335 SUPERFAMILY SSF53822 72 333 3.08E-49 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_13260 95b14b7db50ffe5985ccfc617c88d76d 335 SMART SM00354 11 82 1.3E-26 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_13260 95b14b7db50ffe5985ccfc617c88d76d 335 SUPERFAMILY SSF47413 12 70 5.63E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_13260 95b14b7db50ffe5985ccfc617c88d76d 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 15 59 1.2E-14 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_13260 95b14b7db50ffe5985ccfc617c88d76d 335 Gene3D G3DSA:3.40.50.2300 168 298 3.8E-58 T 13-10-2018 RPIT_13260 95b14b7db50ffe5985ccfc617c88d76d 335 Pfam PF13377 Periplasmic binding protein-like domain 177 314 1.2E-24 T 13-10-2018 RPIT_13260 95b14b7db50ffe5985ccfc617c88d76d 335 Gene3D G3DSA:3.40.50.2300 67 313 3.8E-58 T 13-10-2018 RPIT_13260 95b14b7db50ffe5985ccfc617c88d76d 335 Gene3D G3DSA:1.10.260.40 11 66 2.6E-22 T 13-10-2018 RPIT_00865 3028289178f07d903a20c8e0b6e30a83 282 Gene3D G3DSA:3.30.40.60 23 140 4.5E-5 T 13-10-2018 RPIT_06720 10504317356edb23161fe18246e2c37c 279 SUPERFAMILY SSF53335 17 272 8.15E-45 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_06720 10504317356edb23161fe18246e2c37c 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RPIT_06720 10504317356edb23161fe18246e2c37c 279 Pfam PF05175 Methyltransferase small domain 110 187 6.4E-9 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 RPIT_06720 10504317356edb23161fe18246e2c37c 279 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 275 35.39 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RPIT_06720 10504317356edb23161fe18246e2c37c 279 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 21 274 7.6E-43 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 RPIT_06720 10504317356edb23161fe18246e2c37c 279 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 271 1.1E-65 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RPIT_06720 10504317356edb23161fe18246e2c37c 279 Gene3D G3DSA:3.40.50.150 82 278 4.3E-49 T 13-10-2018 RPIT_06720 10504317356edb23161fe18246e2c37c 279 Gene3D G3DSA:1.10.8.10 1 81 3.5E-13 T 13-10-2018 RPIT_08435 a991a5042eb0f6afcaf69db767dd9a02 234 Gene3D G3DSA:1.10.10.10 133 234 3.9E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_08435 a991a5042eb0f6afcaf69db767dd9a02 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 231 2.2E-24 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_08435 a991a5042eb0f6afcaf69db767dd9a02 234 Gene3D G3DSA:3.40.50.2300 2 132 2.3E-37 T 13-10-2018 RPIT_08435 a991a5042eb0f6afcaf69db767dd9a02 234 SMART SM00448 7 117 7.9E-44 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_08435 a991a5042eb0f6afcaf69db767dd9a02 234 SMART SM00862 155 231 9.3E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_08435 a991a5042eb0f6afcaf69db767dd9a02 234 SUPERFAMILY SSF52172 6 187 1.71E-41 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_08435 a991a5042eb0f6afcaf69db767dd9a02 234 Pfam PF00072 Response regulator receiver domain 9 118 2.4E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_06860 46d719d91795d0a6d78663732cb132cc 329 Gene3D G3DSA:1.10.260.40 1 61 4.8E-18 T 13-10-2018 RPIT_06860 46d719d91795d0a6d78663732cb132cc 329 SUPERFAMILY SSF47413 1 60 1.9E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_06860 46d719d91795d0a6d78663732cb132cc 329 Gene3D G3DSA:3.40.50.2300 167 325 8.9E-52 T 13-10-2018 RPIT_06860 46d719d91795d0a6d78663732cb132cc 329 Gene3D G3DSA:3.40.50.2300 91 320 8.9E-52 T 13-10-2018 RPIT_06860 46d719d91795d0a6d78663732cb132cc 329 Pfam PF13377 Periplasmic binding protein-like domain 177 326 1.9E-19 T 13-10-2018 RPIT_06860 46d719d91795d0a6d78663732cb132cc 329 SMART SM00354 3 73 1.6E-13 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_06860 46d719d91795d0a6d78663732cb132cc 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 50 1.1E-9 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_06860 46d719d91795d0a6d78663732cb132cc 329 SUPERFAMILY SSF53822 74 314 4.07E-42 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_03630 cf1de3bd5066fe47e713a23b0deb9799 119 Gene3D G3DSA:2.60.300.12 14 119 3.9E-30 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 RPIT_03630 cf1de3bd5066fe47e713a23b0deb9799 119 SUPERFAMILY SSF89360 15 109 1.71E-27 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 RPIT_03630 cf1de3bd5066fe47e713a23b0deb9799 119 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 15 119 9.3E-36 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 RPIT_03630 cf1de3bd5066fe47e713a23b0deb9799 119 Pfam PF01521 Iron-sulphur cluster biosynthesis 17 116 5.6E-19 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 RPIT_03630 cf1de3bd5066fe47e713a23b0deb9799 119 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 101 118 - T 13-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 RPIT_07960 6a84d7f6bd991b925445fe55d5034997 342 SUPERFAMILY SSF51735 3 183 1.03E-71 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_07960 6a84d7f6bd991b925445fe55d5034997 342 SUPERFAMILY SSF48179 184 333 7.65E-69 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 RPIT_07960 6a84d7f6bd991b925445fe55d5034997 342 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 178 1.1E-76 T 13-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RPIT_07960 6a84d7f6bd991b925445fe55d5034997 342 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 1.0E-64 T 13-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RPIT_07960 6a84d7f6bd991b925445fe55d5034997 342 PIRSF PIRSF000116 1 210 3.3E-40 T 13-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RPIT_07960 6a84d7f6bd991b925445fe55d5034997 342 PIRSF PIRSF000116 203 332 5.9E-14 T 13-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RPIT_07960 6a84d7f6bd991b925445fe55d5034997 342 Gene3D G3DSA:3.40.50.720 1 182 1.0E-78 T 13-10-2018 RPIT_07960 6a84d7f6bd991b925445fe55d5034997 342 Gene3D G3DSA:1.10.3730.40 183 336 3.2E-70 T 13-10-2018 RPIT_07960 6a84d7f6bd991b925445fe55d5034997 342 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 329 1.2E-130 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RPIT_07960 6a84d7f6bd991b925445fe55d5034997 342 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 329 45.494 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 Gene3D G3DSA:3.30.70.370 625 886 1.3E-101 T 13-10-2018 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 Gene3D G3DSA:1.10.150.20 178 250 1.1E-89 T 13-10-2018 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 PRINTS PR00868 DNA-polymerase family A (pol I) signature 662 685 2.1E-71 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 PRINTS PR00868 DNA-polymerase family A (pol I) signature 716 741 2.1E-71 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 PRINTS PR00868 DNA-polymerase family A (pol I) signature 807 823 2.1E-71 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 PRINTS PR00868 DNA-polymerase family A (pol I) signature 775 786 2.1E-71 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 PRINTS PR00868 DNA-polymerase family A (pol I) signature 692 705 2.1E-71 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 PRINTS PR00868 DNA-polymerase family A (pol I) signature 753 764 2.1E-71 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 PRINTS PR00868 DNA-polymerase family A (pol I) signature 837 850 2.1E-71 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 PRINTS PR00868 DNA-polymerase family A (pol I) signature 616 638 2.1E-71 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 PRINTS PR00868 DNA-polymerase family A (pol I) signature 639 654 2.1E-71 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 173 2.4E-53 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 175 269 1.0E-22 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 SMART SM00474 309 480 2.1E-7 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 SUPERFAMILY SSF53098 311 481 2.28E-32 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 SMART SM00482 647 854 6.3E-109 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 Gene3D G3DSA:1.10.150.20 671 814 1.3E-101 T 13-10-2018 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 Gene3D G3DSA:3.40.50.1010 7 281 1.1E-89 T 13-10-2018 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 Gene3D G3DSA:3.30.420.10 314 503 9.1E-34 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 Pfam PF00476 DNA polymerase family A 514 887 2.3E-138 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 SUPERFAMILY SSF47807 175 287 1.79E-26 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 Gene3D G3DSA:1.20.1060.10 505 619 8.9E-29 T 13-10-2018 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 SUPERFAMILY SSF56672 485 888 3.22E-135 T 13-10-2018 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 TIGRFAM TIGR00593 pola: DNA polymerase I 7 889 3.3E-289 T 13-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 SMART SM00279 177 212 6.0E-11 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 SUPERFAMILY SSF88723 4 173 5.89E-51 T 13-10-2018 IPR029060 PIN-like domain superfamily RPIT_04100 9b6f269648ff221340f6bcf70434ed56 891 SMART SM00475 5 265 1.6E-125 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 RPIT_05035 054a21578a3ffb6e9003dbb12296304d 583 Gene3D G3DSA:3.30.160.270 467 578 1.8E-32 T 13-10-2018 RPIT_05035 054a21578a3ffb6e9003dbb12296304d 583 SUPERFAMILY SSF110921 480 577 2.22E-32 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RPIT_05035 054a21578a3ffb6e9003dbb12296304d 583 Gene3D G3DSA:1.10.1220.20 409 462 4.4E-23 T 13-10-2018 RPIT_05035 054a21578a3ffb6e9003dbb12296304d 583 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 53 69 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RPIT_05035 054a21578a3ffb6e9003dbb12296304d 583 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 20 577 8.9E-252 T 13-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RPIT_05035 054a21578a3ffb6e9003dbb12296304d 583 Pfam PF08502 LeuA allosteric (dimerisation) domain 446 577 4.6E-28 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RPIT_05035 054a21578a3ffb6e9003dbb12296304d 583 SUPERFAMILY SSF51569 35 344 4.21E-96 T 13-10-2018 RPIT_05035 054a21578a3ffb6e9003dbb12296304d 583 SMART SM00917 446 578 2.9E-35 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RPIT_05035 054a21578a3ffb6e9003dbb12296304d 583 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 21 579 53.08 T 13-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RPIT_05035 054a21578a3ffb6e9003dbb12296304d 583 SUPERFAMILY SSF89000 412 461 5.1E-15 T 13-10-2018 RPIT_05035 054a21578a3ffb6e9003dbb12296304d 583 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 257 270 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RPIT_05035 054a21578a3ffb6e9003dbb12296304d 583 Pfam PF00682 HMGL-like 46 327 4.3E-72 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 RPIT_05035 054a21578a3ffb6e9003dbb12296304d 583 Gene3D G3DSA:3.20.20.70 25 400 1.6E-154 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_09130 4661804231b9d8669280aa3bb319ceec 772 Pfam PF13476 AAA domain 47 75 4.4E-6 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain RPIT_09130 4661804231b9d8669280aa3bb319ceec 772 Gene3D G3DSA:3.40.50.300 37 416 1.7E-22 T 13-10-2018 RPIT_09130 4661804231b9d8669280aa3bb319ceec 772 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 282 394 6.7E-7 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RPIT_09130 4661804231b9d8669280aa3bb319ceec 772 SUPERFAMILY SSF52540 42 407 4.66E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10915 546a189987af40bd44454788f7a24159 113 SUPERFAMILY SSF51182 13 109 7.47E-20 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily RPIT_10915 546a189987af40bd44454788f7a24159 113 Gene3D G3DSA:2.60.120.10 10 111 1.9E-25 T 13-10-2018 IPR014710 RmlC-like jelly roll fold RPIT_10915 546a189987af40bd44454788f7a24159 113 Pfam PF07883 Cupin domain 43 107 8.0E-10 T 13-10-2018 IPR013096 Cupin 2, conserved barrel RPIT_03080 31c7522e4462f54bd227c07d2c30e8b3 77 SUPERFAMILY SSF46561 6 67 3.66E-22 T 13-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03080 31c7522e4462f54bd227c07d2c30e8b3 77 TIGRFAM TIGR00012 L29: ribosomal protein uL29 9 64 1.3E-22 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03080 31c7522e4462f54bd227c07d2c30e8b3 77 Pfam PF00831 Ribosomal L29 protein 9 64 1.6E-25 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03080 31c7522e4462f54bd227c07d2c30e8b3 77 ProSitePatterns PS00579 Ribosomal protein L29 signature. 43 57 - T 13-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03080 31c7522e4462f54bd227c07d2c30e8b3 77 Gene3D G3DSA:1.10.287.310 5 69 3.2E-26 T 13-10-2018 RPIT_03080 31c7522e4462f54bd227c07d2c30e8b3 77 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 5 64 17.157 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_00670 e6b1b721df018136008d8fc33e75d56a 211 Pfam PF08044 Domain of unknown function (DUF1707) 11 62 1.4E-18 T 13-10-2018 IPR012551 Protein of unknown function DUF1707 RPIT_14000 11e2fee862afd0ff8d505214e238ca17 316 Pfam PF13276 HTH-like domain 51 96 4.1E-8 T 13-10-2018 IPR025948 HTH-like domain RPIT_14000 11e2fee862afd0ff8d505214e238ca17 316 Gene3D G3DSA:3.30.420.10 116 288 4.2E-9 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 RPIT_14000 11e2fee862afd0ff8d505214e238ca17 316 Pfam PF00665 Integrase core domain 120 254 2.0E-13 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 RPIT_14000 11e2fee862afd0ff8d505214e238ca17 316 SUPERFAMILY SSF53098 117 297 3.64E-21 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily RPIT_12745 6f593959879a20044811a5d6e7a3a425 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 296 1.9E-8 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_12745 6f593959879a20044811a5d6e7a3a425 310 SUPERFAMILY SSF161098 61 289 1.44E-55 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_12745 6f593959879a20044811a5d6e7a3a425 310 Gene3D G3DSA:1.10.3720.10 58 304 9.1E-62 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_03070 259ebcfab8a8a695ef80f06d4411477b 267 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 1.9E-36 T 13-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03070 259ebcfab8a8a695ef80f06d4411477b 267 SMART SM00322 59 124 7.6E-6 T 13-10-2018 IPR004087 K Homology domain GO:0003676 RPIT_03070 259ebcfab8a8a695ef80f06d4411477b 267 SUPERFAMILY SSF54814 2 105 4.49E-36 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 RPIT_03070 259ebcfab8a8a695ef80f06d4411477b 267 Gene3D G3DSA:3.30.1140.32 107 207 3.1E-39 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03070 259ebcfab8a8a695ef80f06d4411477b 267 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 13-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03070 259ebcfab8a8a695ef80f06d4411477b 267 Gene3D G3DSA:3.30.300.20 18 106 8.6E-29 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta RPIT_03070 259ebcfab8a8a695ef80f06d4411477b 267 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 37.605 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RPIT_03070 259ebcfab8a8a695ef80f06d4411477b 267 Pfam PF07650 KH domain 37 109 6.5E-21 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03070 259ebcfab8a8a695ef80f06d4411477b 267 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 1.4E-91 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RPIT_03070 259ebcfab8a8a695ef80f06d4411477b 267 SUPERFAMILY SSF54821 106 205 1.44E-36 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_02990 8440713d24960b8faa462ea01c695b52 558 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 27 335 3.1E-98 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 RPIT_02990 8440713d24960b8faa462ea01c695b52 558 SUPERFAMILY SSF52374 27 344 2.73E-85 T 13-10-2018 RPIT_02990 8440713d24960b8faa462ea01c695b52 558 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 27 552 3.3E-191 T 13-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RPIT_02990 8440713d24960b8faa462ea01c695b52 558 Gene3D G3DSA:2.40.240.10 346 469 8.9E-60 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RPIT_02990 8440713d24960b8faa462ea01c695b52 558 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 33 44 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_02990 8440713d24960b8faa462ea01c695b52 558 Gene3D G3DSA:2.40.240.10 340 548 8.9E-60 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RPIT_02990 8440713d24960b8faa462ea01c695b52 558 SUPERFAMILY SSF50715 338 549 6.8E-60 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RPIT_02990 8440713d24960b8faa462ea01c695b52 558 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 338 534 6.0E-49 T 13-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RPIT_02990 8440713d24960b8faa462ea01c695b52 558 Gene3D G3DSA:3.40.50.620 8 339 2.9E-129 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_02990 8440713d24960b8faa462ea01c695b52 558 PRINTS PR00987 Glutamyl-tRNA synthetase signature 59 72 1.1E-7 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 RPIT_02990 8440713d24960b8faa462ea01c695b52 558 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 218 1.1E-7 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 RPIT_02990 8440713d24960b8faa462ea01c695b52 558 PRINTS PR00987 Glutamyl-tRNA synthetase signature 30 42 1.1E-7 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 RPIT_01810 22ef30b02c0a422181373def98c3e288 309 Gene3D G3DSA:3.30.1360.120 141 293 2.7E-28 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RPIT_01810 22ef30b02c0a422181373def98c3e288 309 Gene3D G3DSA:3.30.1360.120 15 137 1.3E-16 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RPIT_01810 22ef30b02c0a422181373def98c3e288 309 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 170 232 2.1E-18 T 13-10-2018 IPR017703 YgfZ/GcvT conserved site RPIT_01810 22ef30b02c0a422181373def98c3e288 309 SUPERFAMILY SSF103025 13 221 1.44E-45 T 13-10-2018 RPIT_01810 22ef30b02c0a422181373def98c3e288 309 PIRSF PIRSF006487 10 131 4.4E-6 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 RPIT_01810 22ef30b02c0a422181373def98c3e288 309 PIRSF PIRSF006487 153 301 2.7E-4 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 RPIT_01810 22ef30b02c0a422181373def98c3e288 309 SUPERFAMILY SSF101790 225 286 3.27E-5 T 13-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal RPIT_01810 22ef30b02c0a422181373def98c3e288 309 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 206 276 2.0E-9 T 13-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RPIT_01810 22ef30b02c0a422181373def98c3e288 309 Pfam PF01571 Aminomethyltransferase folate-binding domain 14 126 1.2E-11 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain RPIT_04665 99f970bf36f8b46b283436f1c1d78584 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 13-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_04665 99f970bf36f8b46b283436f1c1d78584 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 8.6E-24 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_04665 99f970bf36f8b46b283436f1c1d78584 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 21.623 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_04665 99f970bf36f8b46b283436f1c1d78584 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 2 100 4.4E-31 T 13-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_04665 99f970bf36f8b46b283436f1c1d78584 102 SUPERFAMILY SSF141091 1 100 6.15E-30 T 13-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_00610 cfd37448423b5033014a6cde7a442a6c 490 Pfam PF13579 Glycosyl transferase 4-like domain 21 256 7.2E-8 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RPIT_00610 cfd37448423b5033014a6cde7a442a6c 490 Pfam PF13692 Glycosyl transferases group 1 293 435 2.6E-16 T 13-10-2018 RPIT_00610 cfd37448423b5033014a6cde7a442a6c 490 Gene3D G3DSA:3.40.50.2000 278 453 1.8E-28 T 13-10-2018 RPIT_00610 cfd37448423b5033014a6cde7a442a6c 490 SUPERFAMILY SSF53756 22 469 2.16E-43 T 13-10-2018 RPIT_04860 a6479b8be2078b544cfa688dc3ad0d77 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 86 3.0E-15 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_04860 a6479b8be2078b544cfa688dc3ad0d77 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 15.777 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_04860 a6479b8be2078b544cfa688dc3ad0d77 86 Pfam PF01649 Ribosomal protein S20 2 83 3.7E-23 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_04860 a6479b8be2078b544cfa688dc3ad0d77 86 SUPERFAMILY SSF46992 3 86 2.09E-25 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_04860 a6479b8be2078b544cfa688dc3ad0d77 86 Gene3D G3DSA:1.20.58.110 1 86 2.3E-24 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_04860 a6479b8be2078b544cfa688dc3ad0d77 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 83 7.5E-21 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_02870 85d5570c156cd4994ee5be84152c689d 209 PIRSF PIRSF015592 1 202 1.5E-43 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 RPIT_02870 85d5570c156cd4994ee5be84152c689d 209 Pfam PF01470 Pyroglutamyl peptidase 1 165 2.2E-34 T 13-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 RPIT_02870 85d5570c156cd4994ee5be84152c689d 209 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 61 73 5.6E-26 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 RPIT_02870 85d5570c156cd4994ee5be84152c689d 209 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 3 26 5.6E-26 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 RPIT_02870 85d5570c156cd4994ee5be84152c689d 209 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 130 146 5.6E-26 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 RPIT_02870 85d5570c156cd4994ee5be84152c689d 209 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 79 99 5.6E-26 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 RPIT_02870 85d5570c156cd4994ee5be84152c689d 209 SUPERFAMILY SSF53182 1 168 7.85E-45 T 13-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 RPIT_02870 85d5570c156cd4994ee5be84152c689d 209 Gene3D G3DSA:3.40.630.20 1 202 4.0E-52 T 13-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 RPIT_08805 043de66de1956ce0ec38c6853453fc04 199 Gene3D G3DSA:3.90.226.10 1 196 2.9E-75 T 13-10-2018 RPIT_08805 043de66de1956ce0ec38c6853453fc04 199 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 113 126 - T 13-10-2018 IPR033135 ClpP, histidine active site RPIT_08805 043de66de1956ce0ec38c6853453fc04 199 SUPERFAMILY SSF52096 12 197 1.76E-63 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily RPIT_08805 043de66de1956ce0ec38c6853453fc04 199 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 91 102 - T 13-10-2018 IPR018215 ClpP, Ser active site RPIT_08805 043de66de1956ce0ec38c6853453fc04 199 PRINTS PR00127 Clp protease catalytic subunit P signature 60 80 2.5E-42 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIT_08805 043de66de1956ce0ec38c6853453fc04 199 PRINTS PR00127 Clp protease catalytic subunit P signature 20 35 2.5E-42 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIT_08805 043de66de1956ce0ec38c6853453fc04 199 PRINTS PR00127 Clp protease catalytic subunit P signature 112 131 2.5E-42 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIT_08805 043de66de1956ce0ec38c6853453fc04 199 PRINTS PR00127 Clp protease catalytic subunit P signature 170 189 2.5E-42 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIT_08805 043de66de1956ce0ec38c6853453fc04 199 PRINTS PR00127 Clp protease catalytic subunit P signature 91 108 2.5E-42 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIT_08805 043de66de1956ce0ec38c6853453fc04 199 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 4 195 40.363 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIT_08805 043de66de1956ce0ec38c6853453fc04 199 Pfam PF00574 Clp protease 15 192 4.9E-75 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RPIT_11765 fbe67f6530d733f85b08883dafecee64 369 Gene3D G3DSA:3.10.20.30 284 369 1.8E-12 T 13-10-2018 IPR012675 Beta-grasp domain superfamily RPIT_11765 fbe67f6530d733f85b08883dafecee64 369 SUPERFAMILY SSF52343 151 274 2.75E-17 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RPIT_11765 fbe67f6530d733f85b08883dafecee64 369 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 292 357 1.7E-6 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIT_11765 fbe67f6530d733f85b08883dafecee64 369 Gene3D G3DSA:3.40.50.80 158 280 1.6E-14 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RPIT_11765 fbe67f6530d733f85b08883dafecee64 369 Pfam PF00970 Oxidoreductase FAD-binding domain 86 151 4.5E-7 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 RPIT_11765 fbe67f6530d733f85b08883dafecee64 369 Gene3D G3DSA:2.40.30.10 54 148 3.6E-17 T 13-10-2018 RPIT_11765 fbe67f6530d733f85b08883dafecee64 369 SUPERFAMILY SSF54292 267 369 1.44E-19 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 RPIT_11765 fbe67f6530d733f85b08883dafecee64 369 SUPERFAMILY SSF63380 58 153 8.6E-21 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 203 517 8.8E-144 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 Pfam PF03054 tRNA methyl transferase 219 250 1.1E-4 T 13-10-2018 RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 8 22 1.8E-5 T 13-10-2018 RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.8E-5 T 13-10-2018 RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.8E-5 T 13-10-2018 RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 Gene3D G3DSA:3.40.50.880 5 199 4.4E-55 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 Gene3D G3DSA:3.40.50.620 200 396 8.5E-74 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 5 517 53.107 T 13-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 Pfam PF00958 GMP synthase C terminal domain 425 516 5.2E-37 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 8 193 9.0E-72 T 13-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 SUPERFAMILY SSF52402 183 437 6.62E-57 T 13-10-2018 RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 SUPERFAMILY SSF52317 4 227 1.13E-52 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 Gene3D G3DSA:3.30.300.10 397 517 6.6E-52 T 13-10-2018 RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 Pfam PF00117 Glutamine amidotransferase class-I 10 190 8.3E-37 T 13-10-2018 IPR017926 Glutamine amidotransferase RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 9.5E-7 T 13-10-2018 RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 9.5E-7 T 13-10-2018 RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 167 180 9.5E-7 T 13-10-2018 RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 SUPERFAMILY SSF54810 396 517 8.11E-47 T 13-10-2018 RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 PRINTS PR00097 Anthranilate synthase component II signature 79 90 7.3E-6 T 13-10-2018 RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 PRINTS PR00097 Anthranilate synthase component II signature 52 61 7.3E-6 T 13-10-2018 RPIT_09925 e2b292b3cafaec7e9574950f3adab82b 517 PRINTS PR00097 Anthranilate synthase component II signature 167 180 7.3E-6 T 13-10-2018 RPIT_09880 d02598b441ab63fccd94eac6fb3c6c16 805 Gene3D G3DSA:1.10.486.10 432 618 5.6E-119 T 13-10-2018 RPIT_09880 d02598b441ab63fccd94eac6fb3c6c16 805 Gene3D G3DSA:1.10.10.160 149 223 1.2E-95 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily RPIT_09880 d02598b441ab63fccd94eac6fb3c6c16 805 SUPERFAMILY SSF52540 39 713 1.43E-170 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_09880 d02598b441ab63fccd94eac6fb3c6c16 805 Gene3D G3DSA:3.40.50.300 45 323 1.2E-95 T 13-10-2018 RPIT_09880 d02598b441ab63fccd94eac6fb3c6c16 805 Pfam PF13361 UvrD-like helicase C-terminal domain 326 686 4.6E-66 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIT_09880 d02598b441ab63fccd94eac6fb3c6c16 805 Pfam PF00580 UvrD/REP helicase N-terminal domain 45 320 3.7E-75 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 RPIT_09880 d02598b441ab63fccd94eac6fb3c6c16 805 Gene3D G3DSA:3.40.50.300 330 704 5.6E-119 T 13-10-2018 RPIT_09880 d02598b441ab63fccd94eac6fb3c6c16 805 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 41 803 7.7E-289 T 13-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 RPIT_02920 301bbb7ca8b2d91dd46b38582d810c02 1312 Gene3D G3DSA:1.10.1790.20 1025 1213 1.2E-65 T 13-10-2018 RPIT_02920 301bbb7ca8b2d91dd46b38582d810c02 1312 SUPERFAMILY SSF64484 5 1266 0.0 T 13-10-2018 RPIT_02920 301bbb7ca8b2d91dd46b38582d810c02 1312 Gene3D G3DSA:1.10.274.100 565 636 1.7E-21 T 13-10-2018 RPIT_02920 301bbb7ca8b2d91dd46b38582d810c02 1312 Gene3D G3DSA:1.10.274.100 637 712 3.0E-15 T 13-10-2018 RPIT_02920 301bbb7ca8b2d91dd46b38582d810c02 1312 Gene3D G3DSA:1.10.40.90 449 491 4.9E-22 T 13-10-2018 RPIT_02920 301bbb7ca8b2d91dd46b38582d810c02 1312 Pfam PF04998 RNA polymerase Rpb1, domain 5 823 1214 7.9E-63 T 13-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02920 301bbb7ca8b2d91dd46b38582d810c02 1312 Gene3D G3DSA:1.10.150.390 1215 1278 2.9E-29 T 13-10-2018 RPIT_02920 301bbb7ca8b2d91dd46b38582d810c02 1312 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1276 17.677 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02920 301bbb7ca8b2d91dd46b38582d810c02 1312 Gene3D G3DSA:1.10.132.30 713 847 4.0E-55 T 13-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02920 301bbb7ca8b2d91dd46b38582d810c02 1312 Pfam PF05000 RNA polymerase Rpb1, domain 4 746 813 6.1E-15 T 13-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02920 301bbb7ca8b2d91dd46b38582d810c02 1312 Pfam PF00623 RNA polymerase Rpb1, domain 2 466 560 3.8E-28 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02920 301bbb7ca8b2d91dd46b38582d810c02 1312 Pfam PF00623 RNA polymerase Rpb1, domain 2 419 459 1.1E-7 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02920 301bbb7ca8b2d91dd46b38582d810c02 1312 Pfam PF04983 RNA polymerase Rpb1, domain 3 564 716 5.9E-23 T 13-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02920 301bbb7ca8b2d91dd46b38582d810c02 1312 SMART SM00663 310 589 9.6E-173 T 13-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02920 301bbb7ca8b2d91dd46b38582d810c02 1312 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1266 0.0 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02920 301bbb7ca8b2d91dd46b38582d810c02 1312 Gene3D G3DSA:2.40.50.100 1041 1114 1.2E-65 T 13-10-2018 RPIT_02920 301bbb7ca8b2d91dd46b38582d810c02 1312 Pfam PF04997 RNA polymerase Rpb1, domain 1 8 417 6.7E-83 T 13-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_06620 fde1a741ffe6101b74ea4f58a24b68fb 230 Gene3D G3DSA:2.70.180.20 1 100 7.9E-19 T 13-10-2018 RPIT_06620 fde1a741ffe6101b74ea4f58a24b68fb 230 Hamap MF_00722 Endonuclease NucS [nucS]. 1 222 31.189 T 13-10-2018 IPR002793 Endonuclease NucS GO:0004519 RPIT_06620 fde1a741ffe6101b74ea4f58a24b68fb 230 Gene3D G3DSA:3.40.1350.10 105 216 4.4E-24 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 RPIT_06620 fde1a741ffe6101b74ea4f58a24b68fb 230 Pfam PF01939 Endonuclease NucS 1 229 3.7E-76 T 13-10-2018 IPR002793 Endonuclease NucS GO:0004519 RPIT_08655 f93a3810546569e46d2844c50459ed87 526 ProSitePatterns PS00622 LuxR-type HTH domain signature. 478 505 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_08655 f93a3810546569e46d2844c50459ed87 526 Gene3D G3DSA:1.10.10.10 431 526 2.8E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_08655 f93a3810546569e46d2844c50459ed87 526 SUPERFAMILY SSF46894 458 523 1.39E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIT_08655 f93a3810546569e46d2844c50459ed87 526 Pfam PF00196 Bacterial regulatory proteins, luxR family 464 517 3.7E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_08655 f93a3810546569e46d2844c50459ed87 526 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 464 478 8.5E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_08655 f93a3810546569e46d2844c50459ed87 526 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 478 494 8.5E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_08655 f93a3810546569e46d2844c50459ed87 526 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 494 506 8.5E-11 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_08655 f93a3810546569e46d2844c50459ed87 526 SMART SM00421 461 518 1.3E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_01870 0b9f3478ecf6168624ee834a8c91f0c1 331 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 326 1.3E-146 T 13-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 RPIT_01870 0b9f3478ecf6168624ee834a8c91f0c1 331 Gene3D G3DSA:3.40.50.10440 11 183 8.6E-65 T 13-10-2018 RPIT_01870 0b9f3478ecf6168624ee834a8c91f0c1 331 Gene3D G3DSA:3.30.1180.20 184 331 7.0E-51 T 13-10-2018 RPIT_01870 0b9f3478ecf6168624ee834a8c91f0c1 331 SUPERFAMILY SSF82549 11 330 1.31E-121 T 13-10-2018 RPIT_01870 0b9f3478ecf6168624ee834a8c91f0c1 331 Pfam PF02733 Dak1 domain 18 325 2.2E-132 T 13-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RPIT_04245 7c2f56acc548f23f1ed7cfa39e9ddcb4 247 SUPERFAMILY SSF52540 7 241 4.82E-80 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04245 7c2f56acc548f23f1ed7cfa39e9ddcb4 247 SMART SM00382 32 219 2.8E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_04245 7c2f56acc548f23f1ed7cfa39e9ddcb4 247 Gene3D G3DSA:3.40.50.300 4 247 4.5E-80 T 13-10-2018 RPIT_04245 7c2f56acc548f23f1ed7cfa39e9ddcb4 247 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_04245 7c2f56acc548f23f1ed7cfa39e9ddcb4 247 Pfam PF00005 ABC transporter 23 171 1.1E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_04245 7c2f56acc548f23f1ed7cfa39e9ddcb4 247 PIRSF PIRSF039085 4 247 1.7E-109 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RPIT_07905 098a2cb49efaef51a9b9672a23ad0851 468 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 RPIT_07905 098a2cb49efaef51a9b9672a23ad0851 468 Gene3D G3DSA:3.30.499.10 324 467 5.1E-49 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 RPIT_07905 098a2cb49efaef51a9b9672a23ad0851 468 Gene3D G3DSA:3.30.499.20 4 286 3.0E-100 T 13-10-2018 RPIT_07905 098a2cb49efaef51a9b9672a23ad0851 468 PRINTS PR00415 Aconitase family signature 286 300 1.8E-47 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_07905 098a2cb49efaef51a9b9672a23ad0851 468 PRINTS PR00415 Aconitase family signature 209 222 1.8E-47 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_07905 098a2cb49efaef51a9b9672a23ad0851 468 PRINTS PR00415 Aconitase family signature 399 412 1.8E-47 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_07905 098a2cb49efaef51a9b9672a23ad0851 468 PRINTS PR00415 Aconitase family signature 82 95 1.8E-47 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_07905 098a2cb49efaef51a9b9672a23ad0851 468 PRINTS PR00415 Aconitase family signature 133 148 1.8E-47 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_07905 098a2cb49efaef51a9b9672a23ad0851 468 PRINTS PR00415 Aconitase family signature 343 354 1.8E-47 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_07905 098a2cb49efaef51a9b9672a23ad0851 468 PRINTS PR00415 Aconitase family signature 108 116 1.8E-47 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_07905 098a2cb49efaef51a9b9672a23ad0851 468 PRINTS PR00415 Aconitase family signature 119 132 1.8E-47 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_07905 098a2cb49efaef51a9b9672a23ad0851 468 PRINTS PR00415 Aconitase family signature 195 208 1.8E-47 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_07905 098a2cb49efaef51a9b9672a23ad0851 468 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 RPIT_07905 098a2cb49efaef51a9b9672a23ad0851 468 SUPERFAMILY SSF53732 1 464 2.75E-163 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 RPIT_07905 098a2cb49efaef51a9b9672a23ad0851 468 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 2.1E-158 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_07905 098a2cb49efaef51a9b9672a23ad0851 468 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 460 4.2E-226 T 13-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 RPIT_07905 098a2cb49efaef51a9b9672a23ad0851 468 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 59.516 T 13-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 RPIT_02065 164904ccd8674f70a63a6763a61b01e0 552 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 481 493 3.0E-17 T 13-10-2018 RPIT_02065 164904ccd8674f70a63a6763a61b01e0 552 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 428 443 3.0E-17 T 13-10-2018 RPIT_02065 164904ccd8674f70a63a6763a61b01e0 552 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 445 460 3.0E-17 T 13-10-2018 RPIT_02065 164904ccd8674f70a63a6763a61b01e0 552 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 286 305 3.0E-17 T 13-10-2018 RPIT_02065 164904ccd8674f70a63a6763a61b01e0 552 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 428 446 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RPIT_02065 164904ccd8674f70a63a6763a61b01e0 552 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 182 193 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RPIT_02065 164904ccd8674f70a63a6763a61b01e0 552 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 4.8E-18 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIT_02065 164904ccd8674f70a63a6763a61b01e0 552 SUPERFAMILY SSF52009 123 231 2.09E-26 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 RPIT_02065 164904ccd8674f70a63a6763a61b01e0 552 SUPERFAMILY SSF51621 245 522 1.46E-84 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 RPIT_02065 164904ccd8674f70a63a6763a61b01e0 552 Gene3D G3DSA:1.10.274.10 24 144 1.8E-42 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 RPIT_02065 164904ccd8674f70a63a6763a61b01e0 552 Gene3D G3DSA:3.20.20.60 230 552 5.5E-95 T 13-10-2018 RPIT_02065 164904ccd8674f70a63a6763a61b01e0 552 PIRSF PIRSF000732 1 552 4.6E-139 T 13-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 RPIT_02065 164904ccd8674f70a63a6763a61b01e0 552 Pfam PF05524 PEP-utilising enzyme, N-terminal 7 124 9.2E-15 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RPIT_02065 164904ccd8674f70a63a6763a61b01e0 552 Gene3D G3DSA:3.50.30.10 7 225 1.8E-42 T 13-10-2018 RPIT_02065 164904ccd8674f70a63a6763a61b01e0 552 SUPERFAMILY SSF47831 35 141 1.7E-16 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 RPIT_02065 164904ccd8674f70a63a6763a61b01e0 552 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 253 521 1.0E-74 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RPIT_03285 99a161930723b160b5c11840c3ad11db 498 Gene3D G3DSA:3.40.309.10 250 451 2.2E-144 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 RPIT_03285 99a161930723b160b5c11840c3ad11db 498 Pfam PF00171 Aldehyde dehydrogenase family 20 478 3.7E-136 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 RPIT_03285 99a161930723b160b5c11840c3ad11db 498 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 482 3.4E-195 T 13-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 RPIT_03285 99a161930723b160b5c11840c3ad11db 498 Gene3D G3DSA:3.40.605.10 25 459 2.2E-144 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 RPIT_03285 99a161930723b160b5c11840c3ad11db 498 SUPERFAMILY SSF53720 2 484 8.12E-144 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 RPIT_13890 9e4a50fb3e904b13ccd863ad80c419a5 124 Gene3D G3DSA:3.40.140.10 1 91 4.8E-18 T 13-10-2018 RPIT_13890 9e4a50fb3e904b13ccd863ad80c419a5 124 SUPERFAMILY SSF53927 8 90 3.85E-17 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 RPIT_13890 9e4a50fb3e904b13ccd863ad80c419a5 124 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 90 1.8E-11 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain RPIT_08525 b53f145113b7ed72f230fa847148a10d 641 SMART SM00369 286 307 290.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype RPIT_08525 b53f145113b7ed72f230fa847148a10d 641 SMART SM00369 308 331 52.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype RPIT_08525 b53f145113b7ed72f230fa847148a10d 641 SMART SM00369 194 218 17.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype RPIT_08525 b53f145113b7ed72f230fa847148a10d 641 SMART SM00369 242 265 6.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype RPIT_08525 b53f145113b7ed72f230fa847148a10d 641 SMART SM00369 172 193 65.0 T 13-10-2018 IPR003591 Leucine-rich repeat, typical subtype RPIT_08525 b53f145113b7ed72f230fa847148a10d 641 SUPERFAMILY SSF52058 129 392 4.19E-45 T 13-10-2018 RPIT_08525 b53f145113b7ed72f230fa847148a10d 641 Gene3D G3DSA:3.80.10.10 92 405 1.8E-64 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily RPIT_13880 cab32b13074ed066a33e20c31b8e9bee 317 Pfam PF00248 Aldo/keto reductase family 16 308 1.3E-59 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain RPIT_13880 cab32b13074ed066a33e20c31b8e9bee 317 SUPERFAMILY SSF51430 1 311 4.98E-82 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily RPIT_13880 cab32b13074ed066a33e20c31b8e9bee 317 Gene3D G3DSA:3.20.20.100 1 316 1.8E-93 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily RPIT_13880 cab32b13074ed066a33e20c31b8e9bee 317 PRINTS PR00069 Aldo-keto reductase signature 138 155 4.5E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIT_13880 cab32b13074ed066a33e20c31b8e9bee 317 PRINTS PR00069 Aldo-keto reductase signature 107 125 4.5E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIT_10055 56c9b0b16d74c7b4b380db58a82c2794 679 Gene3D G3DSA:3.40.50.300 220 458 4.1E-65 T 13-10-2018 RPIT_10055 56c9b0b16d74c7b4b380db58a82c2794 679 Pfam PF00271 Helicase conserved C-terminal domain 487 585 1.1E-22 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_10055 56c9b0b16d74c7b4b380db58a82c2794 679 SMART SM00487 271 470 3.8E-50 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIT_10055 56c9b0b16d74c7b4b380db58a82c2794 679 Pfam PF00270 DEAD/DEAH box helicase 276 441 1.6E-42 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIT_10055 56c9b0b16d74c7b4b380db58a82c2794 679 SUPERFAMILY SSF52540 322 603 1.71E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10055 56c9b0b16d74c7b4b380db58a82c2794 679 SMART SM00490 504 585 2.1E-30 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_10055 56c9b0b16d74c7b4b380db58a82c2794 679 Gene3D G3DSA:3.40.50.300 466 656 4.3E-41 T 13-10-2018 RPIT_05385 64a140053439213eaf94c83313907f0d 269 PIRSF PIRSF006493 1 269 3.5E-90 T 13-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type RPIT_05385 64a140053439213eaf94c83313907f0d 269 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 2 254 32.842 T 13-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type RPIT_05385 64a140053439213eaf94c83313907f0d 269 SMART SM00559 53 181 3.5E-28 T 13-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 RPIT_05385 64a140053439213eaf94c83313907f0d 269 Pfam PF02735 Ku70/Ku80 beta-barrel domain 12 190 5.0E-34 T 13-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 RPIT_05385 64a140053439213eaf94c83313907f0d 269 Gene3D G3DSA:2.40.290.10 4 179 4.0E-18 T 13-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily RPIT_05385 64a140053439213eaf94c83313907f0d 269 TIGRFAM TIGR02772 Ku_bact: Ku protein 3 257 3.6E-91 T 13-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type RPIT_05385 64a140053439213eaf94c83313907f0d 269 SUPERFAMILY SSF100939 1 259 2.35E-53 T 13-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily RPIT_13550 a8f4b49a40dd867e4229f155724186d0 310 SUPERFAMILY SSF52440 1 94 7.0E-22 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily RPIT_13550 a8f4b49a40dd867e4229f155724186d0 310 Gene3D G3DSA:3.30.1490.20 109 182 1.5E-55 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 RPIT_13550 a8f4b49a40dd867e4229f155724186d0 310 PIRSF PIRSF039102 42 310 2.9E-65 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_13550 a8f4b49a40dd867e4229f155724186d0 310 PIRSF PIRSF039102 1 53 5.2E-7 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_13550 a8f4b49a40dd867e4229f155724186d0 310 SUPERFAMILY SSF56059 94 305 7.07E-46 T 13-10-2018 RPIT_13550 a8f4b49a40dd867e4229f155724186d0 310 Gene3D G3DSA:3.40.50.20 1 82 1.8E-21 T 13-10-2018 RPIT_13550 a8f4b49a40dd867e4229f155724186d0 310 Pfam PF07478 D-ala D-ala ligase C-terminus 105 306 3.2E-43 T 13-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_13550 a8f4b49a40dd867e4229f155724186d0 310 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 309 29.651 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_13550 a8f4b49a40dd867e4229f155724186d0 310 Gene3D G3DSA:3.30.470.20 87 304 1.5E-55 T 13-10-2018 RPIT_13550 a8f4b49a40dd867e4229f155724186d0 310 Pfam PF01820 D-ala D-ala ligase N-terminus 3 83 1.5E-13 T 13-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_08730 419c61c33958e1cd832e62f96ffbc39c 899 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 47 93 2.3E-8 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal RPIT_08730 419c61c33958e1cd832e62f96ffbc39c 899 SMART SM00316 495 574 1.9E-7 T 13-10-2018 IPR022967 RNA-binding domain, S1 RPIT_08730 419c61c33958e1cd832e62f96ffbc39c 899 Gene3D G3DSA:1.10.10.2480 46 109 7.3E-11 T 13-10-2018 RPIT_08730 419c61c33958e1cd832e62f96ffbc39c 899 Gene3D G3DSA:2.40.50.140 489 580 9.4E-29 T 13-10-2018 RPIT_08730 419c61c33958e1cd832e62f96ffbc39c 899 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 472 880 2.0E-137 T 13-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 RPIT_08730 419c61c33958e1cd832e62f96ffbc39c 899 SUPERFAMILY SSF50249 497 580 2.24E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_08730 419c61c33958e1cd832e62f96ffbc39c 899 Pfam PF10150 Ribonuclease E/G family 576 851 8.7E-96 T 13-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 RPIT_02300 eb29a91a8e4a512da0c61d1b4ee04830 417 SUPERFAMILY SSF53098 113 276 5.44E-14 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily RPIT_02300 eb29a91a8e4a512da0c61d1b4ee04830 417 Gene3D G3DSA:3.30.420.10 115 283 2.1E-5 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 RPIT_02300 eb29a91a8e4a512da0c61d1b4ee04830 417 Pfam PF00665 Integrase core domain 113 237 8.7E-16 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 RPIT_02300 eb29a91a8e4a512da0c61d1b4ee04830 417 Pfam PF02796 Helix-turn-helix domain of resolvase 5 35 2.4E-5 T 13-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 RPIT_07990 616979aac8f4f58076c2f9b39e49b40d 911 Pfam PF00271 Helicase conserved C-terminal domain 368 432 2.5E-4 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_07990 616979aac8f4f58076c2f9b39e49b40d 911 SUPERFAMILY SSF52540 23 445 2.7E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_07990 616979aac8f4f58076c2f9b39e49b40d 911 SMART SM01142 738 909 2.8E-54 T 13-10-2018 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal RPIT_07990 616979aac8f4f58076c2f9b39e49b40d 911 SMART SM00487 8 193 5.2E-31 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIT_07990 616979aac8f4f58076c2f9b39e49b40d 911 Pfam PF08148 DSHCT (NUC185) domain 741 905 1.5E-33 T 13-10-2018 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal RPIT_07990 616979aac8f4f58076c2f9b39e49b40d 911 Gene3D G3DSA:1.10.3380.30 691 904 2.1E-21 T 13-10-2018 RPIT_07990 616979aac8f4f58076c2f9b39e49b40d 911 Gene3D G3DSA:3.40.50.300 186 463 1.8E-51 T 13-10-2018 RPIT_07990 616979aac8f4f58076c2f9b39e49b40d 911 Gene3D G3DSA:3.40.50.300 2 185 1.2E-60 T 13-10-2018 RPIT_07990 616979aac8f4f58076c2f9b39e49b40d 911 Pfam PF00270 DEAD/DEAH box helicase 15 164 1.6E-19 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIT_07990 616979aac8f4f58076c2f9b39e49b40d 911 Pfam PF13234 rRNA-processing arch domain 488 589 5.1E-4 T 13-10-2018 IPR025696 rRNA-processing arch domain RPIT_07990 616979aac8f4f58076c2f9b39e49b40d 911 SMART SM00490 346 432 5.4E-13 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_00710 5200f078da2af771d8c54d72d2fa597c 362 Gene3D G3DSA:3.20.20.370 163 350 2.7E-29 T 13-10-2018 RPIT_00710 5200f078da2af771d8c54d72d2fa597c 362 Pfam PF01522 Polysaccharide deacetylase 171 286 4.6E-8 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIT_00710 5200f078da2af771d8c54d72d2fa597c 362 SUPERFAMILY SSF88713 134 348 1.78E-31 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIT_04035 01188249d9b8fb81e42772f463030a4a 482 SUPERFAMILY SSF51984 16 102 4.58E-21 T 13-10-2018 RPIT_04035 01188249d9b8fb81e42772f463030a4a 482 Gene3D G3DSA:3.40.1190.10 103 316 2.4E-63 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 RPIT_04035 01188249d9b8fb81e42772f463030a4a 482 SUPERFAMILY SSF53623 100 317 7.85E-53 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 RPIT_04035 01188249d9b8fb81e42772f463030a4a 482 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 17 466 6.1E-127 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_04035 01188249d9b8fb81e42772f463030a4a 482 Pfam PF01225 Mur ligase family, catalytic domain 17 114 1.2E-21 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 RPIT_04035 01188249d9b8fb81e42772f463030a4a 482 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 412 6.8E-19 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 RPIT_04035 01188249d9b8fb81e42772f463030a4a 482 Gene3D G3DSA:3.40.50.720 16 102 2.0E-24 T 13-10-2018 RPIT_04035 01188249d9b8fb81e42772f463030a4a 482 SUPERFAMILY SSF53244 318 472 1.81E-38 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RPIT_04035 01188249d9b8fb81e42772f463030a4a 482 Pfam PF08245 Mur ligase middle domain 119 298 6.0E-25 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 RPIT_04035 01188249d9b8fb81e42772f463030a4a 482 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 14 475 34.245 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_04035 01188249d9b8fb81e42772f463030a4a 482 Gene3D G3DSA:3.90.190.20 317 480 4.0E-47 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RPIT_05400 9d710b4d4779a91139a53384b0d4aedb 283 SMART SM00481 3 68 3.7E-18 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal RPIT_05400 9d710b4d4779a91139a53384b0d4aedb 283 Gene3D G3DSA:1.10.150.650 96 168 5.1E-80 T 13-10-2018 RPIT_05400 9d710b4d4779a91139a53384b0d4aedb 283 Pfam PF02811 PHP domain 4 120 7.0E-12 T 13-10-2018 IPR004013 PHP domain GO:0003824 RPIT_05400 9d710b4d4779a91139a53384b0d4aedb 283 SUPERFAMILY SSF89550 1 274 2.35E-43 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 RPIT_05400 9d710b4d4779a91139a53384b0d4aedb 283 Gene3D G3DSA:3.20.20.140 3 250 5.1E-80 T 13-10-2018 RPIT_04215 65bb64c301b7f57c7160139657ba01c0 405 Gene3D G3DSA:3.40.50.1260 173 392 5.5E-143 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04215 65bb64c301b7f57c7160139657ba01c0 405 PIRSF PIRSF000724 1 405 3.0E-136 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04215 65bb64c301b7f57c7160139657ba01c0 405 PRINTS PR00477 Phosphoglycerate kinase family signature 171 193 4.9E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04215 65bb64c301b7f57c7160139657ba01c0 405 PRINTS PR00477 Phosphoglycerate kinase family signature 141 163 4.9E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04215 65bb64c301b7f57c7160139657ba01c0 405 PRINTS PR00477 Phosphoglycerate kinase family signature 321 346 4.9E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04215 65bb64c301b7f57c7160139657ba01c0 405 PRINTS PR00477 Phosphoglycerate kinase family signature 194 213 4.9E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04215 65bb64c301b7f57c7160139657ba01c0 405 PRINTS PR00477 Phosphoglycerate kinase family signature 354 365 4.9E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04215 65bb64c301b7f57c7160139657ba01c0 405 PRINTS PR00477 Phosphoglycerate kinase family signature 378 395 4.9E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04215 65bb64c301b7f57c7160139657ba01c0 405 PRINTS PR00477 Phosphoglycerate kinase family signature 9 25 4.9E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04215 65bb64c301b7f57c7160139657ba01c0 405 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 4.9E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04215 65bb64c301b7f57c7160139657ba01c0 405 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 4.9E-83 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04215 65bb64c301b7f57c7160139657ba01c0 405 SUPERFAMILY SSF53748 3 402 8.6E-140 T 13-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04215 65bb64c301b7f57c7160139657ba01c0 405 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 14 24 - T 13-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04215 65bb64c301b7f57c7160139657ba01c0 405 Gene3D G3DSA:3.40.50.1260 9 400 5.5E-143 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04215 65bb64c301b7f57c7160139657ba01c0 405 Pfam PF00162 Phosphoglycerate kinase 5 392 2.1E-147 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04215 65bb64c301b7f57c7160139657ba01c0 405 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 402 40.472 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_04415 56c0a18c2ab38a0f5129684f408f5a44 263 PIRSF PIRSF018249 1 261 1.3E-77 T 13-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 RPIT_04415 56c0a18c2ab38a0f5129684f408f5a44 263 Pfam PF08241 Methyltransferase domain 89 175 3.0E-7 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 RPIT_04415 56c0a18c2ab38a0f5129684f408f5a44 263 SUPERFAMILY SSF53335 11 240 2.41E-32 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_04415 56c0a18c2ab38a0f5129684f408f5a44 263 Gene3D G3DSA:3.40.50.150 8 261 1.4E-64 T 13-10-2018 RPIT_07015 788e184eff8aafceec17c808b3250873 220 SUPERFAMILY SSF52172 5 120 1.17E-8 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_07015 788e184eff8aafceec17c808b3250873 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 2.5E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_07015 788e184eff8aafceec17c808b3250873 220 SUPERFAMILY SSF46894 137 211 1.29E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIT_07015 788e184eff8aafceec17c808b3250873 220 Gene3D G3DSA:3.40.50.12740 6 211 2.6E-28 T 13-10-2018 RPIT_07015 788e184eff8aafceec17c808b3250873 220 SMART SM00421 148 205 7.2E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_07015 788e184eff8aafceec17c808b3250873 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 8.7E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_07015 788e184eff8aafceec17c808b3250873 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 8.7E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_07015 788e184eff8aafceec17c808b3250873 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 8.7E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_12555 5ae161442fad2a4d10ab80488574f583 332 Gene3D G3DSA:1.10.132.120 90 324 5.9E-69 T 13-10-2018 RPIT_12555 5ae161442fad2a4d10ab80488574f583 332 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 83 288 7.2E-29 T 13-10-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 RPIT_12555 5ae161442fad2a4d10ab80488574f583 332 SUPERFAMILY SSF55869 18 83 2.48E-22 T 13-10-2018 IPR035447 DNA topoisomerase I, N-terminal RPIT_12555 5ae161442fad2a4d10ab80488574f583 332 Gene3D G3DSA:3.30.66.10 5 89 2.1E-31 T 13-10-2018 IPR035447 DNA topoisomerase I, N-terminal RPIT_12555 5ae161442fad2a4d10ab80488574f583 332 Gene3D G3DSA:3.90.15.10 113 233 5.9E-69 T 13-10-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 RPIT_12555 5ae161442fad2a4d10ab80488574f583 332 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 166 182 2.2E-11 T 13-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 RPIT_12555 5ae161442fad2a4d10ab80488574f583 332 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 122 141 2.2E-11 T 13-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 RPIT_12555 5ae161442fad2a4d10ab80488574f583 332 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 232 246 2.2E-11 T 13-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 RPIT_12555 5ae161442fad2a4d10ab80488574f583 332 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 284 295 2.2E-11 T 13-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 RPIT_12555 5ae161442fad2a4d10ab80488574f583 332 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 145 159 2.2E-11 T 13-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 RPIT_12555 5ae161442fad2a4d10ab80488574f583 332 SUPERFAMILY SSF56349 78 308 1.82E-59 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIT_13545 c34ea6543d721fff77cc5d60b27e9e91 437 Pfam PF00155 Aminotransferase class I and II 63 401 8.5E-33 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIT_13545 c34ea6543d721fff77cc5d60b27e9e91 437 SUPERFAMILY SSF53383 20 408 2.23E-104 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_13545 c34ea6543d721fff77cc5d60b27e9e91 437 Gene3D G3DSA:3.90.1150.10 32 406 2.9E-127 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_13545 c34ea6543d721fff77cc5d60b27e9e91 437 Gene3D G3DSA:3.40.640.10 79 301 2.9E-127 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_12735 e38f5998c89bed36c827e50d7af87bad 506 SUPERFAMILY SSF50249 14 158 4.16E-32 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_12735 e38f5998c89bed36c827e50d7af87bad 506 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 504 33.67 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RPIT_12735 e38f5998c89bed36c827e50d7af87bad 506 Gene3D G3DSA:3.30.930.10 164 506 3.9E-104 T 13-10-2018 RPIT_12735 e38f5998c89bed36c827e50d7af87bad 506 Pfam PF00152 tRNA synthetases class II (D, K and N) 165 501 1.4E-64 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_12735 e38f5998c89bed36c827e50d7af87bad 506 SUPERFAMILY SSF55681 165 502 1.78E-97 T 13-10-2018 RPIT_12735 e38f5998c89bed36c827e50d7af87bad 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 265 282 7.1E-31 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RPIT_12735 e38f5998c89bed36c827e50d7af87bad 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 387 403 7.1E-31 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RPIT_12735 e38f5998c89bed36c827e50d7af87bad 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 202 212 7.1E-31 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RPIT_12735 e38f5998c89bed36c827e50d7af87bad 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 247 260 7.1E-31 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RPIT_12735 e38f5998c89bed36c827e50d7af87bad 506 PRINTS PR00982 Lysyl-tRNA synthetase signature 218 234 7.1E-31 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RPIT_12735 e38f5998c89bed36c827e50d7af87bad 506 Pfam PF01336 OB-fold nucleic acid binding domain 66 148 1.8E-9 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RPIT_12735 e38f5998c89bed36c827e50d7af87bad 506 Gene3D G3DSA:2.40.50.140 12 160 1.4E-37 T 13-10-2018 RPIT_12735 e38f5998c89bed36c827e50d7af87bad 506 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 16 503 4.8E-130 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RPIT_04720 906a6ff92649e589c21a416f213ab52d 335 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 1 335 40.063 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 RPIT_04720 906a6ff92649e589c21a416f213ab52d 335 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 17 26 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 RPIT_04720 906a6ff92649e589c21a416f213ab52d 335 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 135 151 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 RPIT_04720 906a6ff92649e589c21a416f213ab52d 335 Gene3D G3DSA:3.20.20.210 1 335 1.3E-128 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 RPIT_04720 906a6ff92649e589c21a416f213ab52d 335 SUPERFAMILY SSF51726 4 333 2.22E-90 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 RPIT_04720 906a6ff92649e589c21a416f213ab52d 335 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 4 333 3.2E-106 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 RPIT_04720 906a6ff92649e589c21a416f213ab52d 335 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 334 4.3E-114 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 RPIT_07925 0a1298477b78d7a8ba2114bb42420513 293 Gene3D G3DSA:3.40.960.10 183 283 4.1E-10 T 13-10-2018 RPIT_07925 0a1298477b78d7a8ba2114bb42420513 293 SUPERFAMILY SSF52980 180 265 9.65E-5 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RPIT_07925 0a1298477b78d7a8ba2114bb42420513 293 Pfam PF04480 Protein of unknown function (DUF559) 184 275 6.3E-6 T 13-10-2018 IPR007569 Protein of unknown function DUF559 RPIT_01895 85846ce8738e11b6fc7b601d83c2ab9c 394 Gene3D G3DSA:1.10.3720.10 146 393 7.7E-52 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_01895 85846ce8738e11b6fc7b601d83c2ab9c 394 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 179 386 1.3E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_01895 85846ce8738e11b6fc7b601d83c2ab9c 394 SUPERFAMILY SSF161098 147 379 3.01E-43 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_01895 85846ce8738e11b6fc7b601d83c2ab9c 394 SUPERFAMILY SSF160964 47 155 1.57E-6 T 13-10-2018 RPIT_00515 6ada002e3201017f7728539b33f7e694 850 SUPERFAMILY SSF53756 21 446 1.88E-28 T 13-10-2018 RPIT_00515 6ada002e3201017f7728539b33f7e694 850 SUPERFAMILY SSF53756 681 845 9.42E-11 T 13-10-2018 RPIT_00515 6ada002e3201017f7728539b33f7e694 850 Gene3D G3DSA:3.40.50.2000 699 832 2.4E-8 T 13-10-2018 RPIT_00515 6ada002e3201017f7728539b33f7e694 850 Gene3D G3DSA:3.40.50.2000 134 266 5.4E-20 T 13-10-2018 RPIT_00515 6ada002e3201017f7728539b33f7e694 850 Pfam PF00534 Glycosyl transferases group 1 287 439 2.2E-10 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 RPIT_00515 6ada002e3201017f7728539b33f7e694 850 Gene3D G3DSA:3.40.50.2000 267 441 5.4E-20 T 13-10-2018 RPIT_01585 b47e4e4b584335944e4ab5ea1b6b5e8b 187 Gene3D G3DSA:3.30.70.560 19 176 1.8E-47 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 RPIT_01585 b47e4e4b584335944e4ab5ea1b6b5e8b 187 SUPERFAMILY SSF55083 21 171 6.28E-44 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 RPIT_01585 b47e4e4b584335944e4ab5ea1b6b5e8b 187 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 22 151 1.4E-38 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 RPIT_01585 b47e4e4b584335944e4ab5ea1b6b5e8b 187 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 107 118 - T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 RPIT_01585 b47e4e4b584335944e4ab5ea1b6b5e8b 187 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 23 151 1.9E-34 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 RPIT_04800 2b5ca7f6b679e0df283a8437661b41f9 221 Gene3D G3DSA:2.40.440.10 102 220 2.6E-21 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like RPIT_04800 2b5ca7f6b679e0df283a8437661b41f9 221 SUPERFAMILY SSF141523 106 220 4.97E-20 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like RPIT_04800 2b5ca7f6b679e0df283a8437661b41f9 221 Pfam PF03734 L,D-transpeptidase catalytic domain 108 219 3.0E-14 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 RPIT_04800 2b5ca7f6b679e0df283a8437661b41f9 221 Gene3D G3DSA:1.10.101.10 7 84 2.9E-17 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 RPIT_04800 2b5ca7f6b679e0df283a8437661b41f9 221 Pfam PF01471 Putative peptidoglycan binding domain 17 73 4.4E-16 T 13-10-2018 IPR002477 Peptidoglycan binding-like RPIT_04800 2b5ca7f6b679e0df283a8437661b41f9 221 SUPERFAMILY SSF47090 7 77 3.79E-17 T 13-10-2018 IPR036365 PGBD-like superfamily RPIT_05875 94f288565e862030763b4281e896e952 220 Gene3D G3DSA:3.40.50.12740 4 219 2.0E-60 T 13-10-2018 RPIT_05875 94f288565e862030763b4281e896e952 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 1.4E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_05875 94f288565e862030763b4281e896e952 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 1.4E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_05875 94f288565e862030763b4281e896e952 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 1.4E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_05875 94f288565e862030763b4281e896e952 220 SMART SM00448 4 118 1.3E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_05875 94f288565e862030763b4281e896e952 220 SMART SM00421 156 213 3.8E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_05875 94f288565e862030763b4281e896e952 220 Pfam PF00072 Response regulator receiver domain 7 119 2.4E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_05875 94f288565e862030763b4281e896e952 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 212 1.4E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_05875 94f288565e862030763b4281e896e952 220 SUPERFAMILY SSF52172 3 187 3.95E-32 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_04545 a3fe5f49e75616e7f8f16e0a2097412d 380 Gene3D G3DSA:3.30.413.10 273 371 3.5E-36 T 13-10-2018 RPIT_04545 a3fe5f49e75616e7f8f16e0a2097412d 380 Pfam PF04551 GcpE protein 21 359 5.6E-132 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 RPIT_04545 a3fe5f49e75616e7f8f16e0a2097412d 380 Gene3D G3DSA:3.20.20.20 10 271 4.2E-103 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_04545 a3fe5f49e75616e7f8f16e0a2097412d 380 SUPERFAMILY SSF51717 45 219 5.34E-9 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_04545 a3fe5f49e75616e7f8f16e0a2097412d 380 PIRSF PIRSF004640 11 372 4.8E-145 T 13-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 RPIT_04545 a3fe5f49e75616e7f8f16e0a2097412d 380 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 18 358 2.0E-126 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 RPIT_04545 a3fe5f49e75616e7f8f16e0a2097412d 380 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 16 367 33.763 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 RPIT_04545 a3fe5f49e75616e7f8f16e0a2097412d 380 SUPERFAMILY SSF56014 275 358 1.44E-12 T 13-10-2018 RPIT_02835 8d95c2ac977577bff3ef8a4715c2459a 596 SMART SM00382 376 561 7.2E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_02835 8d95c2ac977577bff3ef8a4715c2459a 596 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_02835 8d95c2ac977577bff3ef8a4715c2459a 596 Pfam PF00005 ABC transporter 367 513 2.7E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_02835 8d95c2ac977577bff3ef8a4715c2459a 596 Pfam PF00664 ABC transporter transmembrane region 37 306 8.4E-47 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 RPIT_02835 8d95c2ac977577bff3ef8a4715c2459a 596 SUPERFAMILY SSF52540 342 583 1.96E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_02835 8d95c2ac977577bff3ef8a4715c2459a 596 Gene3D G3DSA:3.40.50.300 341 590 2.2E-75 T 13-10-2018 RPIT_02835 8d95c2ac977577bff3ef8a4715c2459a 596 Gene3D G3DSA:1.20.1560.10 15 334 4.2E-73 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_02835 8d95c2ac977577bff3ef8a4715c2459a 596 SUPERFAMILY SSF90123 23 333 6.8E-69 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_02855 6a80a0d3c08c50229c48037438279b1f 269 SUPERFAMILY SSF50104 213 268 2.21E-15 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily RPIT_02855 6a80a0d3c08c50229c48037438279b1f 269 Pfam PF02357 Transcription termination factor nusG 84 186 7.9E-25 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RPIT_02855 6a80a0d3c08c50229c48037438279b1f 269 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 82 268 23.053 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 RPIT_02855 6a80a0d3c08c50229c48037438279b1f 269 SMART SM00739 214 241 1.1E-4 T 13-10-2018 IPR005824 KOW RPIT_02855 6a80a0d3c08c50229c48037438279b1f 269 PRINTS PR00338 Transcription termination factor NUSG signature 226 241 1.0E-12 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 RPIT_02855 6a80a0d3c08c50229c48037438279b1f 269 PRINTS PR00338 Transcription termination factor NUSG signature 137 149 1.0E-12 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 RPIT_02855 6a80a0d3c08c50229c48037438279b1f 269 PRINTS PR00338 Transcription termination factor NUSG signature 244 260 1.0E-12 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 RPIT_02855 6a80a0d3c08c50229c48037438279b1f 269 SUPERFAMILY SSF82679 84 187 3.79E-36 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RPIT_02855 6a80a0d3c08c50229c48037438279b1f 269 Gene3D G3DSA:3.30.70.940 78 195 1.9E-40 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RPIT_02855 6a80a0d3c08c50229c48037438279b1f 269 Gene3D G3DSA:2.30.30.30 207 268 8.6E-22 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 RPIT_02855 6a80a0d3c08c50229c48037438279b1f 269 SMART SM00738 82 190 1.3E-38 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RPIT_02855 6a80a0d3c08c50229c48037438279b1f 269 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 85 268 9.8E-56 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 RPIT_07940 3938c69af5bf03f15459355d47e07881 525 Pfam PF00682 HMGL-like 12 265 3.3E-48 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 RPIT_07940 3938c69af5bf03f15459355d47e07881 525 Gene3D G3DSA:3.30.160.270 348 517 3.3E-8 T 13-10-2018 RPIT_07940 3938c69af5bf03f15459355d47e07881 525 SUPERFAMILY SSF110921 412 516 4.45E-23 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RPIT_07940 3938c69af5bf03f15459355d47e07881 525 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 18 34 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RPIT_07940 3938c69af5bf03f15459355d47e07881 525 SMART SM00917 379 520 1.4E-35 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RPIT_07940 3938c69af5bf03f15459355d47e07881 525 Gene3D G3DSA:3.20.20.70 11 331 1.2E-101 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_07940 3938c69af5bf03f15459355d47e07881 525 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 12 521 6.1E-191 T 13-10-2018 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101 RPIT_07940 3938c69af5bf03f15459355d47e07881 525 Pfam PF08502 LeuA allosteric (dimerisation) domain 381 518 7.0E-28 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RPIT_07940 3938c69af5bf03f15459355d47e07881 525 SUPERFAMILY SSF51569 8 298 1.01E-75 T 13-10-2018 RPIT_05435 832c67aa5467074ab568c56fb102ba44 1058 Pfam PF13361 UvrD-like helicase C-terminal domain 347 745 3.5E-25 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIT_05435 832c67aa5467074ab568c56fb102ba44 1058 Pfam PF00580 UvrD/REP helicase N-terminal domain 26 335 3.5E-48 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 RPIT_05435 832c67aa5467074ab568c56fb102ba44 1058 Gene3D G3DSA:1.10.10.160 134 246 1.0E-60 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily RPIT_05435 832c67aa5467074ab568c56fb102ba44 1058 Gene3D G3DSA:3.40.50.300 27 336 1.0E-60 T 13-10-2018 RPIT_05435 832c67aa5467074ab568c56fb102ba44 1058 SUPERFAMILY SSF52540 21 766 2.97E-101 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_05435 832c67aa5467074ab568c56fb102ba44 1058 Pfam PF12705 PD-(D/E)XK nuclease superfamily 876 1033 5.9E-10 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type RPIT_05435 832c67aa5467074ab568c56fb102ba44 1058 SUPERFAMILY SSF52980 896 1018 4.08E-5 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RPIT_06160 8a6fb97df9fa338db9171933c82db564 184 SMART SM00072 3 182 3.5E-46 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RPIT_06160 8a6fb97df9fa338db9171933c82db564 184 Hamap MF_00328 Guanylate kinase [gmk]. 2 184 30.74 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 RPIT_06160 8a6fb97df9fa338db9171933c82db564 184 Gene3D G3DSA:3.30.63.10 35 95 7.0E-57 T 13-10-2018 RPIT_06160 8a6fb97df9fa338db9171933c82db564 184 Pfam PF00625 Guanylate kinase 7 179 5.1E-37 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RPIT_06160 8a6fb97df9fa338db9171933c82db564 184 Gene3D G3DSA:3.40.50.300 8 178 7.0E-57 T 13-10-2018 RPIT_06160 8a6fb97df9fa338db9171933c82db564 184 SUPERFAMILY SSF52540 7 182 3.25E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06160 8a6fb97df9fa338db9171933c82db564 184 ProSitePatterns PS00856 Guanylate kinase-like signature. 38 55 - T 13-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RPIT_06160 8a6fb97df9fa338db9171933c82db564 184 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 179 1.7E-60 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 RPIT_08975 17c070eac663ef366f929f9413351c03 502 SUPERFAMILY SSF50443 330 497 2.88E-62 T 13-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal RPIT_08975 17c070eac663ef366f929f9413351c03 502 SUPERFAMILY SSF53743 4 328 1.83E-112 T 13-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 RPIT_08975 17c070eac663ef366f929f9413351c03 502 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 476 1.2E-47 T 13-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 RPIT_08975 17c070eac663ef366f929f9413351c03 502 Pfam PF02610 L-arabinose isomerase 7 359 1.2E-168 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 RPIT_08975 17c070eac663ef366f929f9413351c03 502 PIRSF PIRSF001478 2 500 7.2E-225 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 RPIT_08975 17c070eac663ef366f929f9413351c03 502 Gene3D G3DSA:3.40.50.10940 2 176 7.6E-75 T 13-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 RPIT_08975 17c070eac663ef366f929f9413351c03 502 Hamap MF_00519 L-arabinose isomerase [araA]. 2 477 61.903 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 RPIT_08975 17c070eac663ef366f929f9413351c03 502 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 9 305 2.0E-109 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 RPIT_02170 f3a115996fc8ee706105610171de9768 402 SUPERFAMILY SSF63867 328 399 1.57E-14 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RPIT_02170 f3a115996fc8ee706105610171de9768 402 Pfam PF00994 Probable molybdopterin binding domain 180 317 4.1E-23 T 13-10-2018 IPR001453 MoaB/Mog domain RPIT_02170 f3a115996fc8ee706105610171de9768 402 SUPERFAMILY SSF63882 1 176 5.36E-47 T 13-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RPIT_02170 f3a115996fc8ee706105610171de9768 402 SUPERFAMILY SSF53218 175 323 3.14E-37 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily RPIT_02170 f3a115996fc8ee706105610171de9768 402 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 167 1.5E-38 T 13-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RPIT_02170 f3a115996fc8ee706105610171de9768 402 Gene3D G3DSA:3.40.980.10 175 328 1.1E-118 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily RPIT_02170 f3a115996fc8ee706105610171de9768 402 Gene3D G3DSA:2.40.340.10 329 393 1.1E-118 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RPIT_02170 f3a115996fc8ee706105610171de9768 402 Gene3D G3DSA:2.170.190.11 44 141 1.1E-118 T 13-10-2018 RPIT_02170 f3a115996fc8ee706105610171de9768 402 Gene3D G3DSA:3.90.105.10 21 174 1.1E-118 T 13-10-2018 RPIT_02170 f3a115996fc8ee706105610171de9768 402 Pfam PF03454 MoeA C-terminal region (domain IV) 331 398 3.1E-13 T 13-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RPIT_02170 f3a115996fc8ee706105610171de9768 402 SMART SM00852 180 319 7.2E-38 T 13-10-2018 IPR001453 MoaB/Mog domain RPIT_00880 544bcd9509bacafddf39d98a4f1f19d7 266 Pfam PF14257 Domain of unknown function (DUF4349) 9 237 3.5E-56 T 13-10-2018 IPR025645 Domain of unknown function DUF4349 RPIT_01780 0baeb0bde347926fd51c501271ce07a6 695 PIRSF PIRSF015589 3 695 7.3E-258 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RPIT_01780 0baeb0bde347926fd51c501271ce07a6 695 SUPERFAMILY SSF56024 332 503 1.26E-53 T 13-10-2018 RPIT_01780 0baeb0bde347926fd51c501271ce07a6 695 Pfam PF13089 Polyphosphate kinase N-terminal domain 14 120 4.5E-34 T 13-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 RPIT_01780 0baeb0bde347926fd51c501271ce07a6 695 SUPERFAMILY SSF143724 118 315 1.61E-60 T 13-10-2018 RPIT_01780 0baeb0bde347926fd51c501271ce07a6 695 Hamap MF_00347 Polyphosphate kinase [ppk]. 11 690 27.729 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RPIT_01780 0baeb0bde347926fd51c501271ce07a6 695 Gene3D G3DSA:3.30.870.10 508 694 4.7E-54 T 13-10-2018 RPIT_01780 0baeb0bde347926fd51c501271ce07a6 695 SUPERFAMILY SSF56024 508 689 1.53E-59 T 13-10-2018 RPIT_01780 0baeb0bde347926fd51c501271ce07a6 695 Gene3D G3DSA:3.30.870.10 325 507 5.2E-72 T 13-10-2018 RPIT_01780 0baeb0bde347926fd51c501271ce07a6 695 Pfam PF13090 Polyphosphate kinase C-terminal domain 337 685 3.1E-141 T 13-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 RPIT_01780 0baeb0bde347926fd51c501271ce07a6 695 Gene3D G3DSA:3.30.1840.10 8 315 9.5E-106 T 13-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 RPIT_01780 0baeb0bde347926fd51c501271ce07a6 695 SUPERFAMILY SSF140356 12 116 5.36E-33 T 13-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 RPIT_01780 0baeb0bde347926fd51c501271ce07a6 695 Pfam PF02503 Polyphosphate kinase middle domain 130 324 1.2E-63 T 13-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 RPIT_01780 0baeb0bde347926fd51c501271ce07a6 695 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 13 685 4.8E-235 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RPIT_04470 fe885046cbc7c19794fef2435641402e 262 SUPERFAMILY SSF56784 1 261 8.59E-54 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_04470 fe885046cbc7c19794fef2435641402e 262 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 257 2.8E-41 T 13-10-2018 IPR000150 Cof family GO:0016787 RPIT_04470 fe885046cbc7c19794fef2435641402e 262 Gene3D G3DSA:3.40.50.1000 5 257 2.9E-56 T 13-10-2018 IPR023214 HAD superfamily RPIT_04470 fe885046cbc7c19794fef2435641402e 262 ProSitePatterns PS01229 Hypothetical cof family signature 2. 211 233 - T 13-10-2018 RPIT_04470 fe885046cbc7c19794fef2435641402e 262 Gene3D G3DSA:3.30.1240.10 83 187 2.9E-56 T 13-10-2018 RPIT_04470 fe885046cbc7c19794fef2435641402e 262 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 257 2.6E-40 T 13-10-2018 RPIT_07130 88b0245fb91ba279baa3088e77f4ab1f 370 SUPERFAMILY SSF52440 4 143 4.41E-32 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily RPIT_07130 88b0245fb91ba279baa3088e77f4ab1f 370 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 306 333 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_07130 88b0245fb91ba279baa3088e77f4ab1f 370 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 5 363 39.763 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_07130 88b0245fb91ba279baa3088e77f4ab1f 370 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 362 6.0E-103 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_07130 88b0245fb91ba279baa3088e77f4ab1f 370 Gene3D G3DSA:3.30.470.20 133 365 2.3E-71 T 13-10-2018 RPIT_07130 88b0245fb91ba279baa3088e77f4ab1f 370 Pfam PF07478 D-ala D-ala ligase C-terminus 152 360 1.5E-66 T 13-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_07130 88b0245fb91ba279baa3088e77f4ab1f 370 PIRSF PIRSF039102 2 367 1.4E-105 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_07130 88b0245fb91ba279baa3088e77f4ab1f 370 Gene3D G3DSA:3.40.50.20 1 132 2.1E-33 T 13-10-2018 RPIT_07130 88b0245fb91ba279baa3088e77f4ab1f 370 Gene3D G3DSA:3.30.1490.20 159 230 2.3E-71 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 RPIT_07130 88b0245fb91ba279baa3088e77f4ab1f 370 SUPERFAMILY SSF56059 144 365 1.94E-53 T 13-10-2018 RPIT_07130 88b0245fb91ba279baa3088e77f4ab1f 370 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 111 122 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_07130 88b0245fb91ba279baa3088e77f4ab1f 370 Pfam PF01820 D-ala D-ala ligase N-terminus 6 134 1.2E-28 T 13-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_11125 0bc9471daa9d305824fabd096af17630 366 Pfam PF00266 Aminotransferase class-V 135 323 6.6E-11 T 13-10-2018 IPR000192 Aminotransferase class V domain RPIT_11125 0bc9471daa9d305824fabd096af17630 366 Gene3D G3DSA:3.40.640.10 26 258 1.3E-46 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_11125 0bc9471daa9d305824fabd096af17630 366 SUPERFAMILY SSF53383 15 362 5.57E-67 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_11125 0bc9471daa9d305824fabd096af17630 366 Gene3D G3DSA:3.90.1150.10 260 364 3.8E-34 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_11125 0bc9471daa9d305824fabd096af17630 366 TIGRFAM TIGR01366 serC_3: putative phosphoserine aminotransferase 10 363 6.8E-148 T 13-10-2018 IPR006272 Phosphoserine aminotransferase, Mycobacterial-type GO:0004648|GO:0006564|GO:0009058 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52 RPIT_11125 0bc9471daa9d305824fabd096af17630 366 PIRSF PIRSF000525 5 364 2.0E-73 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 RPIT_07900 d1e638e88f345bf3bbb47578e5464301 201 Gene3D G3DSA:3.20.19.10 1 168 1.4E-65 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 RPIT_07900 d1e638e88f345bf3bbb47578e5464301 201 SUPERFAMILY SSF52016 1 188 2.75E-50 T 13-10-2018 RPIT_07900 d1e638e88f345bf3bbb47578e5464301 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 180 4.8E-58 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 RPIT_07900 d1e638e88f345bf3bbb47578e5464301 201 Pfam PF00694 Aconitase C-terminal domain 1 111 1.0E-22 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 RPIT_07900 d1e638e88f345bf3bbb47578e5464301 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 191 37.674 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 PRINTS PR00313 NodO calcium binding signature 8702 8713 1.6E-6 T 13-10-2018 RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 PRINTS PR00313 NodO calcium binding signature 8782 8790 1.6E-6 T 13-10-2018 RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 PRINTS PR00313 NodO calcium binding signature 9337 9345 1.6E-6 T 13-10-2018 RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 PRINTS PR00313 NodO calcium binding signature 9665 9674 1.6E-6 T 13-10-2018 RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 Gene3D G3DSA:2.150.10.10 8910 9017 2.6E-7 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 Gene3D G3DSA:2.60.120.560 11905 12077 7.7E-10 T 13-10-2018 RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 Gene3D G3DSA:2.60.120.560 12103 12255 8.3E-10 T 13-10-2018 RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 SUPERFAMILY SSF51120 8627 8801 8.89E-13 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 Gene3D G3DSA:2.150.10.10 11716 11777 1.7E-5 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 Gene3D G3DSA:2.150.10.10 11492 11593 3.0E-10 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 SUPERFAMILY SSF51120 11209 11449 3.84E-9 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 Gene3D G3DSA:2.160.20.160 8587 8807 2.0E-15 T 13-10-2018 RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 SUPERFAMILY SSF51120 11416 11558 3.27E-9 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 SUPERFAMILY SSF141072 10052 10134 3.14E-5 T 13-10-2018 IPR038081 CalX-like domain superfamily RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 11212 11230 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 11725 11743 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 11523 11541 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 SUPERFAMILY SSF51120 11621 11799 4.58E-10 T 13-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal RPIT_01055 be522f88dbd67d5c66a0ce38a75abc29 12360 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 11221 11239 - T 13-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site RPIT_14230 2f0e58f4f218052689f7a28912b722e2 485 Pfam PF00437 Type II/IV secretion system protein 138 407 9.9E-31 T 13-10-2018 IPR001482 Type II/IV secretion system protein RPIT_14230 2f0e58f4f218052689f7a28912b722e2 485 Gene3D G3DSA:3.40.50.300 233 479 2.4E-48 T 13-10-2018 RPIT_14230 2f0e58f4f218052689f7a28912b722e2 485 SUPERFAMILY SSF52540 116 438 1.01E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_13330 99fa09db4a0a3c324dfb79d48795e64c 407 Pfam PF00375 Sodium:dicarboxylate symporter family 13 387 1.2E-74 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RPIT_13330 99fa09db4a0a3c324dfb79d48795e64c 407 Gene3D G3DSA:1.10.3860.10 4 391 3.8E-54 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 RPIT_13330 99fa09db4a0a3c324dfb79d48795e64c 407 SUPERFAMILY SSF118215 13 387 8.63E-78 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 RPIT_12650 aae065ca8ef6a11713a64b60d0ffb324 459 SUPERFAMILY SSF51182 5 180 9.62E-49 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily RPIT_12650 aae065ca8ef6a11713a64b60d0ffb324 459 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 10 177 2.0E-66 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RPIT_12650 aae065ca8ef6a11713a64b60d0ffb324 459 Gene3D G3DSA:3.40.50.720 187 445 1.1E-76 T 13-10-2018 RPIT_12650 aae065ca8ef6a11713a64b60d0ffb324 459 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 10 176 9.2E-36 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RPIT_12650 aae065ca8ef6a11713a64b60d0ffb324 459 Gene3D G3DSA:2.60.120.10 2 184 3.3E-48 T 13-10-2018 IPR014710 RmlC-like jelly roll fold RPIT_12650 aae065ca8ef6a11713a64b60d0ffb324 459 Pfam PF04321 RmlD substrate binding domain 187 457 4.5E-65 T 13-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 RPIT_12650 aae065ca8ef6a11713a64b60d0ffb324 459 Gene3D G3DSA:3.90.25.10 335 446 1.1E-76 T 13-10-2018 RPIT_12650 aae065ca8ef6a11713a64b60d0ffb324 459 SUPERFAMILY SSF51735 187 455 1.02E-69 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_11330 6652401be0328c37a8ea091193ee363d 249 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 248 1.4E-113 T 13-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 RPIT_11330 6652401be0328c37a8ea091193ee363d 249 SMART SM00855 4 190 9.9E-23 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_11330 6652401be0328c37a8ea091193ee363d 249 SUPERFAMILY SSF53254 1 224 2.14E-73 T 13-10-2018 IPR029033 Histidine phosphatase superfamily RPIT_11330 6652401be0328c37a8ea091193ee363d 249 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 231 42.738 T 13-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 RPIT_11330 6652401be0328c37a8ea091193ee363d 249 Gene3D G3DSA:3.40.50.1240 2 249 2.8E-83 T 13-10-2018 IPR029033 Histidine phosphatase superfamily RPIT_11330 6652401be0328c37a8ea091193ee363d 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 127 208 1.8E-6 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_11330 6652401be0328c37a8ea091193ee363d 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 124 2.5E-26 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_11330 6652401be0328c37a8ea091193ee363d 249 PIRSF PIRSF000709 136 219 0.017 T 13-10-2018 RPIT_11330 6652401be0328c37a8ea091193ee363d 249 PIRSF PIRSF000709 2 111 0.006 T 13-10-2018 RPIT_11330 6652401be0328c37a8ea091193ee363d 249 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 13-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 RPIT_09610 2d733d2f83a8be5c7c076ae04760d1cd 359 SUPERFAMILY SSF159283 284 350 1.29E-12 T 13-10-2018 RPIT_09610 2d733d2f83a8be5c7c076ae04760d1cd 359 SUPERFAMILY SSF53448 1 280 1.22E-56 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_09610 2d733d2f83a8be5c7c076ae04760d1cd 359 Gene3D G3DSA:3.90.550.10 2 352 5.5E-99 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_09610 2d733d2f83a8be5c7c076ae04760d1cd 359 Pfam PF00483 Nucleotidyl transferase 5 282 1.2E-39 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 RPIT_03500 057f5ec169d4cfcdf072f0401b7a7ea3 441 Pfam PF00120 Glutamine synthetase, catalytic domain 105 436 2.7E-125 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIT_03500 057f5ec169d4cfcdf072f0401b7a7ea3 441 SMART SM01230 104 351 2.1E-125 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIT_03500 057f5ec169d4cfcdf072f0401b7a7ea3 441 SUPERFAMILY SSF55931 106 438 1.28E-116 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 RPIT_03500 057f5ec169d4cfcdf072f0401b7a7ea3 441 Gene3D G3DSA:3.30.590.10 107 440 7.3E-121 T 13-10-2018 RPIT_03500 057f5ec169d4cfcdf072f0401b7a7ea3 441 SUPERFAMILY SSF54368 8 103 2.22E-28 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIT_03500 057f5ec169d4cfcdf072f0401b7a7ea3 441 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 228 243 - T 13-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 RPIT_03500 057f5ec169d4cfcdf072f0401b7a7ea3 441 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 97 4.7E-26 T 13-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 RPIT_03500 057f5ec169d4cfcdf072f0401b7a7ea3 441 Gene3D G3DSA:3.10.20.70 2 106 9.8E-34 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIT_06455 c1f88daaf1b79189abf843db11dd916f 495 SUPERFAMILY SSF56322 19 486 8.24E-149 T 13-10-2018 IPR005801 ADC synthase GO:0009058 RPIT_06455 c1f88daaf1b79189abf843db11dd916f 495 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 28 486 2.4E-162 T 13-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RPIT_06455 c1f88daaf1b79189abf843db11dd916f 495 Pfam PF04715 Anthranilate synthase component I, N terminal region 29 168 4.0E-29 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RPIT_06455 c1f88daaf1b79189abf843db11dd916f 495 PRINTS PR00095 Anthranilate synthase component I signature 420 434 4.0E-24 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RPIT_06455 c1f88daaf1b79189abf843db11dd916f 495 PRINTS PR00095 Anthranilate synthase component I signature 326 339 4.0E-24 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RPIT_06455 c1f88daaf1b79189abf843db11dd916f 495 PRINTS PR00095 Anthranilate synthase component I signature 340 353 4.0E-24 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RPIT_06455 c1f88daaf1b79189abf843db11dd916f 495 PRINTS PR00095 Anthranilate synthase component I signature 435 449 4.0E-24 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RPIT_06455 c1f88daaf1b79189abf843db11dd916f 495 Gene3D G3DSA:3.60.120.10 1 494 8.3E-186 T 13-10-2018 IPR005801 ADC synthase GO:0009058 RPIT_06455 c1f88daaf1b79189abf843db11dd916f 495 Pfam PF00425 chorismate binding enzyme 225 478 1.1E-94 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal RPIT_08080 24f2615882396d28b4817c040637c774 547 Gene3D G3DSA:3.40.50.300 1 288 1.2E-127 T 13-10-2018 RPIT_08080 24f2615882396d28b4817c040637c774 547 Hamap MF_01227 CTP synthase [pyrG]. 6 541 49.997 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 RPIT_08080 24f2615882396d28b4817c040637c774 547 Pfam PF06418 CTP synthase N-terminus 7 269 5.3E-120 T 13-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 RPIT_08080 24f2615882396d28b4817c040637c774 547 SUPERFAMILY SSF52317 291 543 2.6E-71 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_08080 24f2615882396d28b4817c040637c774 547 SUPERFAMILY SSF52540 6 269 7.08E-117 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_08080 24f2615882396d28b4817c040637c774 547 Gene3D G3DSA:3.40.50.880 289 544 4.7E-96 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_08080 24f2615882396d28b4817c040637c774 547 Pfam PF00117 Glutamine amidotransferase class-I 304 534 1.1E-42 T 13-10-2018 IPR017926 Glutamine amidotransferase RPIT_08080 24f2615882396d28b4817c040637c774 547 TIGRFAM TIGR00337 PyrG: CTP synthase 5 536 8.4E-226 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 RPIT_03265 0fdc827a4ee464e6d90c7587adbced2e 256 SMART SM01134 77 237 3.2E-66 T 13-10-2018 RPIT_03265 0fdc827a4ee464e6d90c7587adbced2e 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.1E-6 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIT_03265 0fdc827a4ee464e6d90c7587adbced2e 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.1E-6 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIT_03265 0fdc827a4ee464e6d90c7587adbced2e 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RPIT_03265 0fdc827a4ee464e6d90c7587adbced2e 256 Gene3D G3DSA:3.40.1080.10 82 222 1.5E-5 T 13-10-2018 RPIT_03265 0fdc827a4ee464e6d90c7587adbced2e 256 SUPERFAMILY SSF100950 80 237 2.88E-34 T 13-10-2018 IPR037171 NagB/RpiA transferase-like RPIT_03265 0fdc827a4ee464e6d90c7587adbced2e 256 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 3.3E-16 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIT_03265 0fdc827a4ee464e6d90c7587adbced2e 256 Pfam PF00455 DeoR C terminal sensor domain 79 236 3.4E-50 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain RPIT_03265 0fdc827a4ee464e6d90c7587adbced2e 256 SUPERFAMILY SSF46785 5 60 1.75E-10 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_03265 0fdc827a4ee464e6d90c7587adbced2e 256 SMART SM00420 6 58 2.4E-16 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIT_01225 04ae5b735fcd273a0803dbd0768bb158 299 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 14 299 8.9E-144 T 13-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RPIT_01225 04ae5b735fcd273a0803dbd0768bb158 299 Gene3D G3DSA:3.20.20.70 5 299 9.0E-148 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_01225 04ae5b735fcd273a0803dbd0768bb158 299 ProSitePatterns PS01235 PdxS/SNZ family signature. 210 228 - T 13-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RPIT_01225 04ae5b735fcd273a0803dbd0768bb158 299 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 9 299 51.236 T 13-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RPIT_01225 04ae5b735fcd273a0803dbd0768bb158 299 SUPERFAMILY SSF51366 23 272 3.95E-61 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 RPIT_01225 04ae5b735fcd273a0803dbd0768bb158 299 PIRSF PIRSF029271 2 299 1.0E-147 T 13-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RPIT_01225 04ae5b735fcd273a0803dbd0768bb158 299 Pfam PF01680 SOR/SNZ family 13 217 3.0E-104 T 13-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RPIT_12145 2351fd14b03e5b1248fbd3f5c87edb5a 473 Gene3D G3DSA:3.30.565.10 323 471 6.3E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_12145 2351fd14b03e5b1248fbd3f5c87edb5a 473 SUPERFAMILY SSF47384 238 315 2.35E-17 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 RPIT_12145 2351fd14b03e5b1248fbd3f5c87edb5a 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 470 5.6E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_12145 2351fd14b03e5b1248fbd3f5c87edb5a 473 SUPERFAMILY SSF55874 306 469 4.32E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_12145 2351fd14b03e5b1248fbd3f5c87edb5a 473 SMART SM00388 251 316 2.3E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIT_12145 2351fd14b03e5b1248fbd3f5c87edb5a 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 1.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_12145 2351fd14b03e5b1248fbd3f5c87edb5a 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 1.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_12145 2351fd14b03e5b1248fbd3f5c87edb5a 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 1.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_12145 2351fd14b03e5b1248fbd3f5c87edb5a 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 1.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_12145 2351fd14b03e5b1248fbd3f5c87edb5a 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 252 315 1.7E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIT_12145 2351fd14b03e5b1248fbd3f5c87edb5a 473 SMART SM00387 359 471 3.6E-37 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_12145 2351fd14b03e5b1248fbd3f5c87edb5a 473 Gene3D G3DSA:1.10.287.130 186 317 1.1E-23 T 13-10-2018 RPIT_04485 d7a2e7c9935afe4848ee2353b93d5dd9 301 SUPERFAMILY SSF56349 10 294 8.54E-54 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIT_04485 d7a2e7c9935afe4848ee2353b93d5dd9 301 Gene3D G3DSA:1.10.443.10 121 295 2.3E-55 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 RPIT_04485 d7a2e7c9935afe4848ee2353b93d5dd9 301 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 11 90 4.8E-17 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RPIT_04485 d7a2e7c9935afe4848ee2353b93d5dd9 301 Gene3D G3DSA:1.10.150.130 9 98 9.5E-19 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal RPIT_04485 d7a2e7c9935afe4848ee2353b93d5dd9 301 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 9 301 52.243 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD RPIT_04485 d7a2e7c9935afe4848ee2353b93d5dd9 301 Pfam PF00589 Phage integrase family 132 286 4.8E-41 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIT_00450 f6f9949cd48d3e825f8f0c8d40937197 319 TIGRFAM TIGR03885 flavin_revert: probable non-F420 flavinoid oxidoreductase 4 316 1.0E-138 T 13-10-2018 IPR023907 Non-F420 flavinoid oxidoreductase RPIT_00450 f6f9949cd48d3e825f8f0c8d40937197 319 SUPERFAMILY SSF51679 2 316 1.44E-55 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 RPIT_00450 f6f9949cd48d3e825f8f0c8d40937197 319 TIGRFAM TIGR03557 F420_G6P_family: F420-dependent oxidoreductase, G6PDH family 4 316 3.4E-80 T 13-10-2018 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related RPIT_00450 f6f9949cd48d3e825f8f0c8d40937197 319 Pfam PF00296 Luciferase-like monooxygenase 3 291 1.7E-47 T 13-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIT_00450 f6f9949cd48d3e825f8f0c8d40937197 319 Gene3D G3DSA:3.20.20.30 1 317 2.8E-62 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 RPIT_08065 95f0fc23f725a903a11425dd6333f04d 150 Gene3D G3DSA:3.10.129.10 14 147 3.8E-26 T 13-10-2018 RPIT_08065 95f0fc23f725a903a11425dd6333f04d 150 SUPERFAMILY SSF54637 17 145 2.93E-23 T 13-10-2018 IPR029069 HotDog domain superfamily RPIT_07105 254da8290c9e24bff4d9025a69393b83 159 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 7 158 3.0E-37 T 13-10-2018 IPR008136 CinA, C-terminal RPIT_07105 254da8290c9e24bff4d9025a69393b83 159 Pfam PF02464 Competence-damaged protein 2 159 1.5E-46 T 13-10-2018 IPR008136 CinA, C-terminal RPIT_07105 254da8290c9e24bff4d9025a69393b83 159 SUPERFAMILY SSF142433 2 159 1.7E-45 T 13-10-2018 IPR036653 CinA-like, C-terminal RPIT_07105 254da8290c9e24bff4d9025a69393b83 159 Gene3D G3DSA:3.90.950.20 1 159 1.3E-51 T 13-10-2018 IPR036653 CinA-like, C-terminal RPIT_02540 2f6ecb4d01504009028bd5a1ded8bcea 1019 Gene3D G3DSA:1.20.58.180 211 291 1.4E-26 T 13-10-2018 RPIT_02540 2f6ecb4d01504009028bd5a1ded8bcea 1019 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 316 1014 19.769 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIT_02540 2f6ecb4d01504009028bd5a1ded8bcea 1019 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 320 884 1.7E-160 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIT_02540 2f6ecb4d01504009028bd5a1ded8bcea 1019 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 293 5.8E-119 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIT_02540 2f6ecb4d01504009028bd5a1ded8bcea 1019 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 286 5.1E-124 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIT_02540 2f6ecb4d01504009028bd5a1ded8bcea 1019 Gene3D G3DSA:3.30.930.10 1 210 1.0E-99 T 13-10-2018 RPIT_02540 2f6ecb4d01504009028bd5a1ded8bcea 1019 SUPERFAMILY SSF109604 676 830 3.06E-9 T 13-10-2018 RPIT_02540 2f6ecb4d01504009028bd5a1ded8bcea 1019 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 287 50.31 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIT_02540 2f6ecb4d01504009028bd5a1ded8bcea 1019 SUPERFAMILY SSF55681 3 286 2.73E-106 T 13-10-2018 RPIT_02540 2f6ecb4d01504009028bd5a1ded8bcea 1019 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 1.2E-56 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIT_02540 2f6ecb4d01504009028bd5a1ded8bcea 1019 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 247 263 1.2E-56 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIT_02540 2f6ecb4d01504009028bd5a1ded8bcea 1019 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 1.2E-56 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIT_02540 2f6ecb4d01504009028bd5a1ded8bcea 1019 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 1.2E-56 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIT_02540 2f6ecb4d01504009028bd5a1ded8bcea 1019 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 1.2E-56 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIT_02540 2f6ecb4d01504009028bd5a1ded8bcea 1019 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 1.2E-56 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIT_02540 2f6ecb4d01504009028bd5a1ded8bcea 1019 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 317 1002 3.2E-140 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIT_05995 e3bdd03832a2a66232d3955b126bd76d 301 Gene3D G3DSA:1.10.150.20 177 253 1.8E-61 T 13-10-2018 RPIT_05995 e3bdd03832a2a66232d3955b126bd76d 301 SUPERFAMILY SSF88723 2 156 2.7E-36 T 13-10-2018 IPR029060 PIN-like domain superfamily RPIT_05995 e3bdd03832a2a66232d3955b126bd76d 301 SMART SM00279 176 211 4.5E-10 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 RPIT_05995 e3bdd03832a2a66232d3955b126bd76d 301 SMART SM00475 1 267 1.9E-64 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 RPIT_05995 e3bdd03832a2a66232d3955b126bd76d 301 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 175 263 2.5E-17 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 RPIT_05995 e3bdd03832a2a66232d3955b126bd76d 301 Gene3D G3DSA:3.40.50.1010 3 278 1.8E-61 T 13-10-2018 RPIT_05995 e3bdd03832a2a66232d3955b126bd76d 301 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 3 172 1.6E-40 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 RPIT_05995 e3bdd03832a2a66232d3955b126bd76d 301 SUPERFAMILY SSF47807 175 287 1.64E-18 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily RPIT_05070 29970ac8b22b4fd0c89431704e284009 250 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_05070 29970ac8b22b4fd0c89431704e284009 250 Gene3D G3DSA:3.40.50.300 2 229 8.0E-57 T 13-10-2018 RPIT_05070 29970ac8b22b4fd0c89431704e284009 250 SMART SM00382 31 217 2.4E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_05070 29970ac8b22b4fd0c89431704e284009 250 SUPERFAMILY SSF52540 7 220 3.74E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_05070 29970ac8b22b4fd0c89431704e284009 250 Pfam PF00005 ABC transporter 22 169 1.0E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 SUPERFAMILY SSF55424 339 455 9.11E-27 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 SUPERFAMILY SSF51905 2 326 8.07E-62 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 341 451 2.9E-23 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 Gene3D G3DSA:3.30.390.30 339 457 1.1E-28 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 317 1.1E-66 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 Gene3D G3DSA:3.50.50.60 6 323 5.7E-105 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 3.2E-36 T 13-10-2018 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 3.2E-36 T 13-10-2018 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 3.2E-36 T 13-10-2018 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 3.2E-36 T 13-10-2018 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.2E-36 T 13-10-2018 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 8.5E-64 T 13-10-2018 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 8.5E-64 T 13-10-2018 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 8.5E-64 T 13-10-2018 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 337 358 8.5E-64 T 13-10-2018 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 8.5E-64 T 13-10-2018 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.5E-64 T 13-10-2018 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 404 419 8.5E-64 T 13-10-2018 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 8.5E-64 T 13-10-2018 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 426 446 8.5E-64 T 13-10-2018 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 Gene3D G3DSA:3.50.50.60 147 264 5.7E-105 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 PIRSF PIRSF000350 1 456 2.4E-70 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 RPIT_11435 b8a96a2be73fc42dafcabc7f3a7f7c10 457 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 455 1.6E-135 T 13-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 RPIT_10265 599ad8307be222f079aa25de4ef19019 566 Pfam PF12229 Putative peptidoglycan binding domain 100 184 3.9E-5 T 13-10-2018 IPR022029 Putative peptidoglycan binding domain RPIT_10265 599ad8307be222f079aa25de4ef19019 566 Pfam PF04294 VanW like protein 357 478 4.1E-44 T 13-10-2018 IPR007391 Vancomycin resistance VanW RPIT_04045 cd21240f33d650142aceda3d6d997693 387 PRINTS PR00423 Cell division protein FtsZ signature 124 145 1.2E-51 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RPIT_04045 cd21240f33d650142aceda3d6d997693 387 PRINTS PR00423 Cell division protein FtsZ signature 210 231 1.2E-51 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RPIT_04045 cd21240f33d650142aceda3d6d997693 387 PRINTS PR00423 Cell division protein FtsZ signature 187 209 1.2E-51 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RPIT_04045 cd21240f33d650142aceda3d6d997693 387 PRINTS PR00423 Cell division protein FtsZ signature 96 116 1.2E-51 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RPIT_04045 cd21240f33d650142aceda3d6d997693 387 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 12 171 2.3E-38 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RPIT_04045 cd21240f33d650142aceda3d6d997693 387 SMART SM00864 11 203 1.4E-109 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RPIT_04045 cd21240f33d650142aceda3d6d997693 387 ProSitePatterns PS01134 FtsZ protein signature 1. 42 76 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 RPIT_04045 cd21240f33d650142aceda3d6d997693 387 Gene3D G3DSA:3.40.50.1440 2 218 2.3E-80 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 RPIT_04045 cd21240f33d650142aceda3d6d997693 387 SUPERFAMILY SSF55307 202 317 8.7E-43 T 13-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 RPIT_04045 cd21240f33d650142aceda3d6d997693 387 SMART SM00865 205 322 1.0E-55 T 13-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 RPIT_04045 cd21240f33d650142aceda3d6d997693 387 Gene3D G3DSA:3.30.1330.20 219 326 1.1E-38 T 13-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 RPIT_04045 cd21240f33d650142aceda3d6d997693 387 ProSitePatterns PS01135 FtsZ protein signature 2. 95 116 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 RPIT_04045 cd21240f33d650142aceda3d6d997693 387 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 7 381 38.351 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 RPIT_04045 cd21240f33d650142aceda3d6d997693 387 SUPERFAMILY SSF52490 6 204 8.24E-68 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 RPIT_04045 cd21240f33d650142aceda3d6d997693 387 Pfam PF12327 FtsZ family, C-terminal domain 220 314 1.1E-34 T 13-10-2018 IPR024757 Cell division protein FtsZ, C-terminal RPIT_04045 cd21240f33d650142aceda3d6d997693 387 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 6 326 4.0E-130 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 RPIT_11350 b6a33bd180ae63b4a6ea95c1e8f2fdd5 379 Gene3D G3DSA:1.20.1090.10 180 379 3.0E-45 T 13-10-2018 RPIT_11350 b6a33bd180ae63b4a6ea95c1e8f2fdd5 379 Gene3D G3DSA:3.40.50.1970 1 179 1.2E-48 T 13-10-2018 RPIT_11350 b6a33bd180ae63b4a6ea95c1e8f2fdd5 379 SUPERFAMILY SSF56796 3 377 2.09E-95 T 13-10-2018 RPIT_11350 b6a33bd180ae63b4a6ea95c1e8f2fdd5 379 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 371 8.3E-94 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 RPIT_03235 7d92a4eb9aa14024b9f4971966c90990 630 Gene3D G3DSA:3.40.50.970 401 590 1.3E-45 T 13-10-2018 RPIT_03235 7d92a4eb9aa14024b9f4971966c90990 630 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 6 626 9.5E-267 T 13-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 RPIT_03235 7d92a4eb9aa14024b9f4971966c90990 630 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 424 583 1.2E-40 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RPIT_03235 7d92a4eb9aa14024b9f4971966c90990 630 Gene3D G3DSA:3.40.50.1220 218 390 2.1E-39 T 13-10-2018 RPIT_03235 7d92a4eb9aa14024b9f4971966c90990 630 SUPERFAMILY SSF52467 190 391 4.26E-43 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily RPIT_03235 7d92a4eb9aa14024b9f4971966c90990 630 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 8 204 3.2E-33 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RPIT_03235 7d92a4eb9aa14024b9f4971966c90990 630 SUPERFAMILY SSF52518 3 219 3.17E-29 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_03235 7d92a4eb9aa14024b9f4971966c90990 630 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 227 361 2.9E-34 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RPIT_03235 7d92a4eb9aa14024b9f4971966c90990 630 SUPERFAMILY SSF52518 404 619 1.57E-52 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_03235 7d92a4eb9aa14024b9f4971966c90990 630 Gene3D G3DSA:3.40.50.970 2 215 6.3E-28 T 13-10-2018 RPIT_03280 d731ec72422650ae89c3f28d77d31d0b 393 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RPIT_03280 d731ec72422650ae89c3f28d77d31d0b 393 SUPERFAMILY SSF50129 1 179 3.65E-58 T 13-10-2018 IPR011032 GroES-like superfamily RPIT_03280 d731ec72422650ae89c3f28d77d31d0b 393 SUPERFAMILY SSF51735 156 354 3.18E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_03280 d731ec72422650ae89c3f28d77d31d0b 393 Gene3D G3DSA:3.40.50.720 169 352 3.9E-123 T 13-10-2018 RPIT_03280 d731ec72422650ae89c3f28d77d31d0b 393 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 143 1.7E-25 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIT_03280 d731ec72422650ae89c3f28d77d31d0b 393 Gene3D G3DSA:3.90.180.10 4 380 3.9E-123 T 13-10-2018 RPIT_03280 d731ec72422650ae89c3f28d77d31d0b 393 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 22 1.8E-9 T 13-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated RPIT_03280 d731ec72422650ae89c3f28d77d31d0b 393 Pfam PF00107 Zinc-binding dehydrogenase 189 258 2.9E-12 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIT_01700 b5c3420996c5ae74c7861202ef5b29b0 525 SUPERFAMILY SSF69618 242 493 5.36E-52 T 13-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_01700 b5c3420996c5ae74c7861202ef5b29b0 525 Gene3D G3DSA:3.40.50.10090 377 495 5.5E-18 T 13-10-2018 RPIT_01700 b5c3420996c5ae74c7861202ef5b29b0 525 Gene3D G3DSA:3.40.50.10090 242 368 7.5E-18 T 13-10-2018 RPIT_01700 b5c3420996c5ae74c7861202ef5b29b0 525 Gene3D G3DSA:3.40.1010.10 8 121 2.5E-17 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 RPIT_01700 b5c3420996c5ae74c7861202ef5b29b0 525 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 16 152 1.2E-15 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 RPIT_01700 b5c3420996c5ae74c7861202ef5b29b0 525 SUPERFAMILY SSF53790 14 258 1.31E-21 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 RPIT_01700 b5c3420996c5ae74c7861202ef5b29b0 525 Pfam PF02602 Uroporphyrinogen-III synthase HemD 255 485 8.0E-52 T 13-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_13430 20fea8fa682aad9bd7330c15fb455caf 186 Pfam PF00583 Acetyltransferase (GNAT) family 36 156 1.4E-10 T 13-10-2018 IPR000182 GNAT domain RPIT_13430 20fea8fa682aad9bd7330c15fb455caf 186 SUPERFAMILY SSF55729 23 163 4.65E-19 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_13430 20fea8fa682aad9bd7330c15fb455caf 186 Gene3D G3DSA:3.40.630.30 5 168 1.5E-17 T 13-10-2018 RPIT_14570 5b0d6dbde31ca2bb318450decc8c0724 225 Pfam PF00106 short chain dehydrogenase 65 179 5.4E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_14570 5b0d6dbde31ca2bb318450decc8c0724 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 154 9.9E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_14570 5b0d6dbde31ca2bb318450decc8c0724 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 172 9.9E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_14570 5b0d6dbde31ca2bb318450decc8c0724 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 212 9.9E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_14570 5b0d6dbde31ca2bb318450decc8c0724 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 9.9E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_14570 5b0d6dbde31ca2bb318450decc8c0724 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 61 72 9.9E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_14570 5b0d6dbde31ca2bb318450decc8c0724 225 SUPERFAMILY SSF51735 2 217 4.64E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_14570 5b0d6dbde31ca2bb318450decc8c0724 225 Gene3D G3DSA:3.40.50.720 2 224 3.0E-42 T 13-10-2018 RPIT_07885 4cfe6c9896e902ac3c3ec3e4dbb15086 111 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 4 109 21.627 T 13-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 RPIT_07885 4cfe6c9896e902ac3c3ec3e4dbb15086 111 SUPERFAMILY SSF103481 9 108 3.4E-9 T 13-10-2018 RPIT_07885 4cfe6c9896e902ac3c3ec3e4dbb15086 111 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 3 110 2.6E-45 T 13-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 RPIT_10495 26c01b949b1f32fc4edb78dbdde9faea 421 SUPERFAMILY SSF53187 4 418 5.03E-91 T 13-10-2018 RPIT_10495 26c01b949b1f32fc4edb78dbdde9faea 421 SUPERFAMILY SSF101821 89 203 1.46E-27 T 13-10-2018 RPIT_10495 26c01b949b1f32fc4edb78dbdde9faea 421 Gene3D G3DSA:3.40.630.10 11 416 8.2E-140 T 13-10-2018 RPIT_10495 26c01b949b1f32fc4edb78dbdde9faea 421 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 77 93 2.4E-36 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 RPIT_10495 26c01b949b1f32fc4edb78dbdde9faea 421 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 385 400 2.4E-36 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 RPIT_10495 26c01b949b1f32fc4edb78dbdde9faea 421 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 110 130 2.4E-36 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 RPIT_10495 26c01b949b1f32fc4edb78dbdde9faea 421 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 296 312 2.4E-36 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 RPIT_10495 26c01b949b1f32fc4edb78dbdde9faea 421 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 253 271 2.4E-36 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 RPIT_10495 26c01b949b1f32fc4edb78dbdde9faea 421 Gene3D G3DSA:2.30.250.10 87 208 8.2E-140 T 13-10-2018 IPR023358 Peptidase M18, domain 2 GO:0004177 RPIT_10495 26c01b949b1f32fc4edb78dbdde9faea 421 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 15 410 6.7E-114 T 13-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 RPIT_12450 c0c883240e122aa4c093f6632ad8a955 368 SUPERFAMILY SSF47384 133 199 7.65E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 RPIT_12450 c0c883240e122aa4c093f6632ad8a955 368 SMART SM00388 137 201 3.9E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIT_12450 c0c883240e122aa4c093f6632ad8a955 368 SMART SM00387 246 360 3.0E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_12450 c0c883240e122aa4c093f6632ad8a955 368 Gene3D G3DSA:1.10.287.130 89 200 1.2E-19 T 13-10-2018 RPIT_12450 c0c883240e122aa4c093f6632ad8a955 368 Gene3D G3DSA:3.30.565.10 201 358 6.6E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_12450 c0c883240e122aa4c093f6632ad8a955 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 283 297 8.1E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_12450 c0c883240e122aa4c093f6632ad8a955 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 301 311 8.1E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_12450 c0c883240e122aa4c093f6632ad8a955 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 337 8.1E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_12450 c0c883240e122aa4c093f6632ad8a955 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 357 8.1E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_12450 c0c883240e122aa4c093f6632ad8a955 368 SMART SM00304 84 136 1.4E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 RPIT_12450 c0c883240e122aa4c093f6632ad8a955 368 Pfam PF00512 His Kinase A (phospho-acceptor) domain 138 200 8.6E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIT_12450 c0c883240e122aa4c093f6632ad8a955 368 SUPERFAMILY SSF55874 202 358 1.83E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_12450 c0c883240e122aa4c093f6632ad8a955 368 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 247 357 4.5E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_09965 9a1fc442164d5117e8bda5f235708220 526 SUPERFAMILY SSF52029 183 374 3.44E-78 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily RPIT_09965 9a1fc442164d5117e8bda5f235708220 526 Gene3D G3DSA:3.30.260.10 135 408 8.2E-222 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily RPIT_09965 9a1fc442164d5117e8bda5f235708220 526 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 523 1.7E-94 T 13-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 RPIT_09965 9a1fc442164d5117e8bda5f235708220 526 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 525 1.0E-242 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RPIT_09965 9a1fc442164d5117e8bda5f235708220 526 SUPERFAMILY SSF54849 136 201 1.05E-23 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily RPIT_09965 9a1fc442164d5117e8bda5f235708220 526 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 13-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RPIT_09965 9a1fc442164d5117e8bda5f235708220 526 SUPERFAMILY SSF48592 6 519 8.33E-72 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily RPIT_09965 9a1fc442164d5117e8bda5f235708220 526 PRINTS PR00298 60kDa chaperonin signature 348 373 7.3E-70 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RPIT_09965 9a1fc442164d5117e8bda5f235708220 526 PRINTS PR00298 60kDa chaperonin signature 82 109 7.3E-70 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RPIT_09965 9a1fc442164d5117e8bda5f235708220 526 PRINTS PR00298 60kDa chaperonin signature 396 417 7.3E-70 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RPIT_09965 9a1fc442164d5117e8bda5f235708220 526 PRINTS PR00298 60kDa chaperonin signature 266 289 7.3E-70 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RPIT_09965 9a1fc442164d5117e8bda5f235708220 526 PRINTS PR00298 60kDa chaperonin signature 26 52 7.3E-70 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RPIT_09965 9a1fc442164d5117e8bda5f235708220 526 Gene3D G3DSA:3.50.7.10 190 370 8.2E-222 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily RPIT_09965 9a1fc442164d5117e8bda5f235708220 526 Hamap MF_00600 60 kDa chaperonin [groL]. 1 526 39.713 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RPIT_09965 9a1fc442164d5117e8bda5f235708220 526 Gene3D G3DSA:1.10.560.10 7 519 8.2E-222 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily RPIT_03880 ffca16c06884f3a1d39192ec3d51b034 134 Pfam PF01610 Transposase 4 90 9.5E-17 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RPIT_01550 f782253480eee9078b3c8a9a18c565df 328 Pfam PF10103 Zincin-like metallopeptidase 11 322 3.0E-58 T 13-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 RPIT_01550 f782253480eee9078b3c8a9a18c565df 328 TIGRFAM TIGR03624 TIGR03624: putative hydrolase 11 325 8.2E-48 T 13-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 RPIT_01550 f782253480eee9078b3c8a9a18c565df 328 TIGRFAM TIGR03883 DUF2342_F420: uncharacterized protein, coenzyme F420 biosynthesis associated 11 324 2.1E-64 T 13-10-2018 IPR022454 Conserved hypothetical protein CHP03883, F420 biosynthesis associated RPIT_01550 f782253480eee9078b3c8a9a18c565df 328 SUPERFAMILY SSF55486 10 324 3.08E-51 T 13-10-2018 RPIT_01550 f782253480eee9078b3c8a9a18c565df 328 Gene3D G3DSA:1.20.150.30 11 131 1.7E-8 T 13-10-2018 RPIT_09000 a7748f2e6cd640db15f34a92e25d24c2 934 Gene3D G3DSA:3.30.70.2740 376 454 1.2E-7 T 13-10-2018 RPIT_09000 a7748f2e6cd640db15f34a92e25d24c2 934 Gene3D G3DSA:3.30.465.40 19 263 3.4E-51 T 13-10-2018 RPIT_09000 a7748f2e6cd640db15f34a92e25d24c2 934 Pfam PF01565 FAD binding domain 44 181 5.0E-40 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIT_09000 a7748f2e6cd640db15f34a92e25d24c2 934 Pfam PF02913 FAD linked oxidases, C-terminal domain 254 492 1.7E-47 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RPIT_09000 a7748f2e6cd640db15f34a92e25d24c2 934 Pfam PF02754 Cysteine-rich domain 724 788 0.087 T 13-10-2018 IPR004017 Cysteine-rich domain RPIT_09000 a7748f2e6cd640db15f34a92e25d24c2 934 SUPERFAMILY SSF55103 255 497 7.68E-54 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RPIT_09000 a7748f2e6cd640db15f34a92e25d24c2 934 SUPERFAMILY SSF56176 21 249 1.47E-54 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 RPIT_09000 a7748f2e6cd640db15f34a92e25d24c2 934 Pfam PF13183 4Fe-4S dicluster domain 525 605 1.4E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIT_09000 a7748f2e6cd640db15f34a92e25d24c2 934 SUPERFAMILY SSF46548 523 609 4.39E-7 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIT_09000 a7748f2e6cd640db15f34a92e25d24c2 934 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 591 602 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIT_00715 5748a0aaca714093c6456c6c8e817778 267 Pfam PF03180 NLPA lipoprotein 28 264 2.5E-63 T 13-10-2018 IPR004872 Lipoprotein NlpA family RPIT_00715 5748a0aaca714093c6456c6c8e817778 267 Gene3D G3DSA:3.40.190.10 30 261 6.8E-80 T 13-10-2018 RPIT_00715 5748a0aaca714093c6456c6c8e817778 267 PIRSF PIRSF002854 1 265 1.1E-75 T 13-10-2018 IPR004872 Lipoprotein NlpA family RPIT_00715 5748a0aaca714093c6456c6c8e817778 267 Gene3D G3DSA:3.40.190.10 110 214 6.8E-80 T 13-10-2018 RPIT_00715 5748a0aaca714093c6456c6c8e817778 267 SUPERFAMILY SSF53850 27 263 1.85E-56 T 13-10-2018 RPIT_11655 fe27bcfdb71b8ce16bffe5ce3605ff2d 495 Gene3D G3DSA:3.50.50.60 27 366 3.2E-46 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_11655 fe27bcfdb71b8ce16bffe5ce3605ff2d 495 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 26 48 8.6E-5 T 13-10-2018 RPIT_11655 fe27bcfdb71b8ce16bffe5ce3605ff2d 495 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 276 291 8.6E-5 T 13-10-2018 RPIT_11655 fe27bcfdb71b8ce16bffe5ce3605ff2d 495 Pfam PF01266 FAD dependent oxidoreductase 27 364 1.6E-36 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIT_11655 fe27bcfdb71b8ce16bffe5ce3605ff2d 495 SUPERFAMILY SSF51905 25 376 2.33E-32 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_11655 fe27bcfdb71b8ce16bffe5ce3605ff2d 495 Gene3D G3DSA:3.30.9.10 117 326 3.2E-46 T 13-10-2018 RPIT_11655 fe27bcfdb71b8ce16bffe5ce3605ff2d 495 SUPERFAMILY SSF50022 416 492 3.54E-17 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 RPIT_11655 fe27bcfdb71b8ce16bffe5ce3605ff2d 495 Gene3D G3DSA:2.102.10.10 405 495 1.6E-18 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 RPIT_11655 fe27bcfdb71b8ce16bffe5ce3605ff2d 495 Pfam PF00355 Rieske [2Fe-2S] domain 437 493 2.5E-6 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIT_14085 a17e92611bef64b8cba74dccfbeaa588 478 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RPIT_14085 a17e92611bef64b8cba74dccfbeaa588 478 PRINTS PR00175 Sodium/alanine symporter signature 351 373 5.4E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RPIT_14085 a17e92611bef64b8cba74dccfbeaa588 478 PRINTS PR00175 Sodium/alanine symporter signature 183 201 5.4E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RPIT_14085 a17e92611bef64b8cba74dccfbeaa588 478 PRINTS PR00175 Sodium/alanine symporter signature 92 114 5.4E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RPIT_14085 a17e92611bef64b8cba74dccfbeaa588 478 PRINTS PR00175 Sodium/alanine symporter signature 305 323 5.4E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RPIT_14085 a17e92611bef64b8cba74dccfbeaa588 478 PRINTS PR00175 Sodium/alanine symporter signature 211 230 5.4E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RPIT_14085 a17e92611bef64b8cba74dccfbeaa588 478 PRINTS PR00175 Sodium/alanine symporter signature 412 432 5.4E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RPIT_14085 a17e92611bef64b8cba74dccfbeaa588 478 Pfam PF01235 Sodium:alanine symporter family 56 446 1.5E-142 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RPIT_14085 a17e92611bef64b8cba74dccfbeaa588 478 TIGRFAM TIGR00835 agcS: amino acid carrier protein 20 443 4.3E-141 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RPIT_07225 56ef700c405bbd7c3deeec65b6a94e84 232 Pfam PF03682 Uncharacterised protein family (UPF0158) 135 227 2.5E-14 T 13-10-2018 IPR005361 Uncharacterised protein family UPF0158 RPIT_11365 b7461950303504da072192cee557f64c 518 Gene3D G3DSA:3.90.226.10 1 256 1.9E-92 T 13-10-2018 RPIT_11365 b7461950303504da072192cee557f64c 518 Gene3D G3DSA:3.90.226.10 262 518 1.4E-94 T 13-10-2018 RPIT_11365 b7461950303504da072192cee557f64c 518 Pfam PF01039 Carboxyl transferase domain 32 514 3.5E-186 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 RPIT_11365 b7461950303504da072192cee557f64c 518 SUPERFAMILY SSF52096 7 259 7.12E-74 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily RPIT_11365 b7461950303504da072192cee557f64c 518 SUPERFAMILY SSF52096 246 515 5.92E-91 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily RPIT_11365 b7461950303504da072192cee557f64c 518 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 197 208 2.2E-6 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 RPIT_11365 b7461950303504da072192cee557f64c 518 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 99 113 2.2E-6 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 RPIT_11365 b7461950303504da072192cee557f64c 518 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 133 151 2.2E-6 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 RPIT_11365 b7461950303504da072192cee557f64c 518 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 169 186 2.2E-6 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 RPIT_06320 12978442bce4fa5df704641b6a17e1b1 339 Gene3D G3DSA:1.10.10.10 258 336 4.6E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_06320 12978442bce4fa5df704641b6a17e1b1 339 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 4.8E-28 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RPIT_06320 12978442bce4fa5df704641b6a17e1b1 339 SUPERFAMILY SSF52540 21 252 2.31E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06320 12978442bce4fa5df704641b6a17e1b1 339 SUPERFAMILY SSF46785 258 331 5.9E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_06320 12978442bce4fa5df704641b6a17e1b1 339 Gene3D G3DSA:1.10.8.60 183 256 5.9E-27 T 13-10-2018 RPIT_06320 12978442bce4fa5df704641b6a17e1b1 339 SMART SM00382 52 183 4.5E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_06320 12978442bce4fa5df704641b6a17e1b1 339 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 327 2.0E-17 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RPIT_06320 12978442bce4fa5df704641b6a17e1b1 339 Gene3D G3DSA:3.40.50.300 21 182 1.4E-35 T 13-10-2018 RPIT_06320 12978442bce4fa5df704641b6a17e1b1 339 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 339 152.106 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RPIT_06320 12978442bce4fa5df704641b6a17e1b1 339 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 327 8.3E-131 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RPIT_06320 12978442bce4fa5df704641b6a17e1b1 339 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 6 236 3.5E-104 T 13-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 RPIT_02525 d7d019f9b89e70f2e0fc7ca855cedc12 409 Gene3D G3DSA:1.10.10.10 4 77 1.9E-5 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_02525 d7d019f9b89e70f2e0fc7ca855cedc12 409 Gene3D G3DSA:3.30.420.40 221 363 2.2E-14 T 13-10-2018 RPIT_02525 d7d019f9b89e70f2e0fc7ca855cedc12 409 Gene3D G3DSA:3.30.420.40 78 220 1.1E-22 T 13-10-2018 RPIT_02525 d7d019f9b89e70f2e0fc7ca855cedc12 409 SUPERFAMILY SSF53067 83 390 1.71E-29 T 13-10-2018 RPIT_02525 d7d019f9b89e70f2e0fc7ca855cedc12 409 Pfam PF00480 ROK family 86 248 6.8E-19 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RPIT_02525 d7d019f9b89e70f2e0fc7ca855cedc12 409 Pfam PF00480 ROK family 291 387 3.6E-5 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RPIT_10365 d7d9bef88c4a2292b4f6944083d72b7f 195 SUPERFAMILY SSF109854 39 174 2.01E-16 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes RPIT_10365 d7d9bef88c4a2292b4f6944083d72b7f 195 Pfam PF12867 DinB superfamily 39 171 1.0E-5 T 13-10-2018 IPR024775 DinB-like domain RPIT_10365 d7d9bef88c4a2292b4f6944083d72b7f 195 Gene3D G3DSA:1.20.120.450 34 175 1.7E-16 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes RPIT_08640 db392a51d7c65d6189e1c7bcff81fefb 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 207 1.1E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_08640 db392a51d7c65d6189e1c7bcff81fefb 225 SMART SM00448 3 116 1.4E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_08640 db392a51d7c65d6189e1c7bcff81fefb 225 SUPERFAMILY SSF52172 3 132 6.26E-33 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_08640 db392a51d7c65d6189e1c7bcff81fefb 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.2E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_08640 db392a51d7c65d6189e1c7bcff81fefb 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.2E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_08640 db392a51d7c65d6189e1c7bcff81fefb 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.2E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_08640 db392a51d7c65d6189e1c7bcff81fefb 225 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_08640 db392a51d7c65d6189e1c7bcff81fefb 225 Gene3D G3DSA:3.40.50.12740 4 214 6.6E-60 T 13-10-2018 RPIT_08640 db392a51d7c65d6189e1c7bcff81fefb 225 SUPERFAMILY SSF46894 144 215 1.73E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIT_08640 db392a51d7c65d6189e1c7bcff81fefb 225 Pfam PF00072 Response regulator receiver domain 5 116 3.4E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_08640 db392a51d7c65d6189e1c7bcff81fefb 225 SMART SM00421 151 208 2.7E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_12765 310ad657759b562e129eca69a0b52f04 458 Pfam PF00171 Aldehyde dehydrogenase family 3 455 4.1E-139 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 RPIT_12765 310ad657759b562e129eca69a0b52f04 458 Gene3D G3DSA:3.40.309.10 239 428 1.1E-151 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 RPIT_12765 310ad657759b562e129eca69a0b52f04 458 SUPERFAMILY SSF53720 3 458 4.06E-144 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 RPIT_12765 310ad657759b562e129eca69a0b52f04 458 Gene3D G3DSA:3.40.605.10 3 453 1.1E-151 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 RPIT_10315 f82911b71c73f3b3c08ba97b274a3651 194 SUPERFAMILY SSF52499 8 179 4.97E-43 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 RPIT_10315 f82911b71c73f3b3c08ba97b274a3651 194 Pfam PF00857 Isochorismatase family 10 186 2.7E-27 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 RPIT_10315 f82911b71c73f3b3c08ba97b274a3651 194 Gene3D G3DSA:3.40.50.850 8 194 2.6E-55 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 RPIT_03635 d828bdca1ff8ae65915347930af2f0a3 250 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 3 83 2.1E-5 T 13-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03635 d828bdca1ff8ae65915347930af2f0a3 250 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 101 209 1.9E-19 T 13-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03635 d828bdca1ff8ae65915347930af2f0a3 250 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 9 219 4.7E-55 T 13-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03635 d828bdca1ff8ae65915347930af2f0a3 250 PRINTS PR01166 Cytochrome c oxidase subunit II signature 154 174 9.8E-17 T 13-10-2018 RPIT_03635 d828bdca1ff8ae65915347930af2f0a3 250 PRINTS PR01166 Cytochrome c oxidase subunit II signature 174 191 9.8E-17 T 13-10-2018 RPIT_03635 d828bdca1ff8ae65915347930af2f0a3 250 PRINTS PR01166 Cytochrome c oxidase subunit II signature 192 209 9.8E-17 T 13-10-2018 RPIT_03635 d828bdca1ff8ae65915347930af2f0a3 250 PRINTS PR01166 Cytochrome c oxidase subunit II signature 95 114 9.8E-17 T 13-10-2018 RPIT_03635 d828bdca1ff8ae65915347930af2f0a3 250 PRINTS PR01166 Cytochrome c oxidase subunit II signature 130 151 9.8E-17 T 13-10-2018 RPIT_03635 d828bdca1ff8ae65915347930af2f0a3 250 PRINTS PR01166 Cytochrome c oxidase subunit II signature 60 72 9.8E-17 T 13-10-2018 RPIT_03635 d828bdca1ff8ae65915347930af2f0a3 250 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 155 203 - T 13-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03635 d828bdca1ff8ae65915347930af2f0a3 250 SUPERFAMILY SSF49503 96 228 6.92E-44 T 13-10-2018 IPR008972 Cupredoxin RPIT_03635 d828bdca1ff8ae65915347930af2f0a3 250 Gene3D G3DSA:2.60.40.420 89 247 2.1E-45 T 13-10-2018 IPR008972 Cupredoxin RPIT_03635 d828bdca1ff8ae65915347930af2f0a3 250 SUPERFAMILY SSF81464 3 87 1.8E-18 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03635 d828bdca1ff8ae65915347930af2f0a3 250 Gene3D G3DSA:1.10.287.90 3 88 1.0E-14 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_08025 93fa89238ac34bf7d07f955454774fd5 363 Gene3D G3DSA:3.10.50.40 109 226 1.9E-22 T 13-10-2018 RPIT_08025 93fa89238ac34bf7d07f955454774fd5 363 Gene3D G3DSA:3.10.50.40 249 359 6.9E-18 T 13-10-2018 RPIT_08025 93fa89238ac34bf7d07f955454774fd5 363 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 126 214 2.3E-13 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain RPIT_08025 93fa89238ac34bf7d07f955454774fd5 363 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 269 355 3.2E-7 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain RPIT_08025 93fa89238ac34bf7d07f955454774fd5 363 SUPERFAMILY SSF54534 251 357 5.11E-19 T 13-10-2018 RPIT_08025 93fa89238ac34bf7d07f955454774fd5 363 SUPERFAMILY SSF54534 109 216 1.37E-23 T 13-10-2018 RPIT_06150 ca7198a248d476cd7ba9d5e15521de50 395 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 4 392 6.1E-166 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RPIT_06150 ca7198a248d476cd7ba9d5e15521de50 395 Gene3D G3DSA:3.30.300.10 101 384 4.4E-167 T 13-10-2018 RPIT_06150 ca7198a248d476cd7ba9d5e15521de50 395 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 1 393 55.215 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RPIT_06150 ca7198a248d476cd7ba9d5e15521de50 395 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 269 277 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RPIT_06150 ca7198a248d476cd7ba9d5e15521de50 395 SUPERFAMILY SSF55973 2 108 5.49E-43 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RPIT_06150 ca7198a248d476cd7ba9d5e15521de50 395 Gene3D G3DSA:3.30.300.10 4 243 4.4E-167 T 13-10-2018 RPIT_06150 ca7198a248d476cd7ba9d5e15521de50 395 SUPERFAMILY SSF55973 243 391 9.03E-66 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RPIT_06150 ca7198a248d476cd7ba9d5e15521de50 395 SUPERFAMILY SSF55973 122 242 1.29E-46 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RPIT_06150 ca7198a248d476cd7ba9d5e15521de50 395 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 243 382 9.4E-65 T 13-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RPIT_06150 ca7198a248d476cd7ba9d5e15521de50 395 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 125 135 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RPIT_06150 ca7198a248d476cd7ba9d5e15521de50 395 PIRSF PIRSF000497 1 394 7.6E-162 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RPIT_06150 ca7198a248d476cd7ba9d5e15521de50 395 Gene3D G3DSA:3.30.300.10 10 280 4.4E-167 T 13-10-2018 RPIT_06150 ca7198a248d476cd7ba9d5e15521de50 395 Pfam PF02772 S-adenosylmethionine synthetase, central domain 124 241 7.3E-44 T 13-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RPIT_06150 ca7198a248d476cd7ba9d5e15521de50 395 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 100 8.3E-39 T 13-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RPIT_00250 cd1b7762557c1ac33c43b0c3b0092a8d 164 SUPERFAMILY SSF54593 51 162 3.24E-12 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_00250 cd1b7762557c1ac33c43b0c3b0092a8d 164 Gene3D G3DSA:3.10.180.10 49 163 1.3E-19 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_14180 765dd65d3560127decc4c6da26f92e65 404 SMART SM00729 29 233 3.6E-4 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 RPIT_14180 765dd65d3560127decc4c6da26f92e65 404 TIGRFAM TIGR04053 sam_11: radical SAM protein, BA_1875 family 23 388 4.4E-150 T 13-10-2018 IPR027634 Radical SAM protein, BA_1875 family RPIT_14180 765dd65d3560127decc4c6da26f92e65 404 SUPERFAMILY SSF102114 26 365 1.57E-56 T 13-10-2018 RPIT_14180 765dd65d3560127decc4c6da26f92e65 404 PIRSF PIRSF037420 13 396 1.7E-85 T 13-10-2018 IPR017200 Coenzyme PQQ synthesis protein E RPIT_14180 765dd65d3560127decc4c6da26f92e65 404 Gene3D G3DSA:3.20.20.70 17 263 5.0E-38 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_14180 765dd65d3560127decc4c6da26f92e65 404 Pfam PF04055 Radical SAM superfamily 34 178 2.0E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIT_09640 f5f5ff28386a4488ea0c1f7d2f8eb81d 386 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 6 371 3.0E-107 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RPIT_09640 f5f5ff28386a4488ea0c1f7d2f8eb81d 386 Gene3D G3DSA:3.40.50.20 1 105 1.9E-29 T 13-10-2018 RPIT_09640 f5f5ff28386a4488ea0c1f7d2f8eb81d 386 SUPERFAMILY SSF56059 102 307 1.41E-58 T 13-10-2018 RPIT_09640 f5f5ff28386a4488ea0c1f7d2f8eb81d 386 Pfam PF02222 ATP-grasp domain 111 287 2.4E-47 T 13-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RPIT_09640 f5f5ff28386a4488ea0c1f7d2f8eb81d 386 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 6 366 37.732 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RPIT_09640 f5f5ff28386a4488ea0c1f7d2f8eb81d 386 Gene3D G3DSA:3.30.1490.20 117 186 4.5E-84 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 RPIT_09640 f5f5ff28386a4488ea0c1f7d2f8eb81d 386 SUPERFAMILY SSF51246 313 381 1.49E-15 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 RPIT_09640 f5f5ff28386a4488ea0c1f7d2f8eb81d 386 SUPERFAMILY SSF52440 5 97 3.45E-22 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily RPIT_09640 f5f5ff28386a4488ea0c1f7d2f8eb81d 386 Gene3D G3DSA:3.30.470.20 106 363 4.5E-84 T 13-10-2018 RPIT_06250 7f5c468b72841c081fbe96d1571e93bb 472 Gene3D G3DSA:3.40.50.300 19 175 1.7E-37 T 13-10-2018 RPIT_06250 7f5c468b72841c081fbe96d1571e93bb 472 Gene3D G3DSA:1.20.272.10 254 358 6.1E-45 T 13-10-2018 RPIT_06250 7f5c468b72841c081fbe96d1571e93bb 472 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 66 168 2.0E-14 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RPIT_06250 7f5c468b72841c081fbe96d1571e93bb 472 SUPERFAMILY SSF52540 27 249 7.17E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06250 7f5c468b72841c081fbe96d1571e93bb 472 Gene3D G3DSA:1.10.3710.10 359 458 9.4E-29 T 13-10-2018 RPIT_06250 7f5c468b72841c081fbe96d1571e93bb 472 SUPERFAMILY SSF48019 266 449 8.93E-73 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 RPIT_06250 7f5c468b72841c081fbe96d1571e93bb 472 Pfam PF12002 MgsA AAA+ ATPase C terminal 281 444 6.5E-69 T 13-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal RPIT_06250 7f5c468b72841c081fbe96d1571e93bb 472 SMART SM00382 62 182 1.4E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_06250 7f5c468b72841c081fbe96d1571e93bb 472 Gene3D G3DSA:1.10.8.60 178 252 2.3E-9 T 13-10-2018 RPIT_06250 7f5c468b72841c081fbe96d1571e93bb 472 Pfam PF16193 AAA C-terminal domain 203 280 3.5E-26 T 13-10-2018 IPR032423 AAA C-terminal domain RPIT_09995 ee6f6322f9d5940dc3ef1425ec84bcbb 248 SUPERFAMILY SSF88713 1 246 4.45E-91 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIT_09995 ee6f6322f9d5940dc3ef1425ec84bcbb 248 Pfam PF03746 LamB/YcsF family 1 237 6.2E-93 T 13-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 RPIT_09995 ee6f6322f9d5940dc3ef1425ec84bcbb 248 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 241 41.427 T 13-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 RPIT_09995 ee6f6322f9d5940dc3ef1425ec84bcbb 248 Gene3D G3DSA:3.20.20.370 1 246 3.0E-93 T 13-10-2018 RPIT_01840 4b02a0d8d6ae3658f65ac76999d80edf 153 Gene3D G3DSA:3.30.530.20 1 153 3.3E-26 T 13-10-2018 IPR023393 START-like domain superfamily RPIT_01840 4b02a0d8d6ae3658f65ac76999d80edf 153 SUPERFAMILY SSF55961 1 130 7.27E-20 T 13-10-2018 RPIT_00640 947f1a27539e6ea72e4fdb3f91634ce4 257 SUPERFAMILY SSF46785 8 64 1.57E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_00640 947f1a27539e6ea72e4fdb3f91634ce4 257 SMART SM01134 75 235 1.7E-37 T 13-10-2018 RPIT_00640 947f1a27539e6ea72e4fdb3f91634ce4 257 Gene3D G3DSA:1.10.10.10 10 105 5.6E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_00640 947f1a27539e6ea72e4fdb3f91634ce4 257 SUPERFAMILY SSF100950 79 234 8.89E-23 T 13-10-2018 IPR037171 NagB/RpiA transferase-like RPIT_00640 947f1a27539e6ea72e4fdb3f91634ce4 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RPIT_00640 947f1a27539e6ea72e4fdb3f91634ce4 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 2.0E-7 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIT_00640 947f1a27539e6ea72e4fdb3f91634ce4 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 2.0E-7 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIT_00640 947f1a27539e6ea72e4fdb3f91634ce4 257 Pfam PF00455 DeoR C terminal sensor domain 79 233 1.5E-32 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain RPIT_00640 947f1a27539e6ea72e4fdb3f91634ce4 257 Pfam PF08220 DeoR-like helix-turn-helix domain 9 61 1.6E-13 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIT_00640 947f1a27539e6ea72e4fdb3f91634ce4 257 SMART SM00420 9 61 5.4E-13 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIT_00815 62db86ace66fbfe2ba40a53aeed76e7d 406 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 341 350 - T 13-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 RPIT_00815 62db86ace66fbfe2ba40a53aeed76e7d 406 Gene3D G3DSA:1.10.630.10 9 394 9.4E-53 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 RPIT_00815 62db86ace66fbfe2ba40a53aeed76e7d 406 Pfam PF00067 Cytochrome P450 263 366 7.3E-10 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 RPIT_00815 62db86ace66fbfe2ba40a53aeed76e7d 406 PRINTS PR00359 B-class P450 signature 69 80 1.8E-7 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RPIT_00815 62db86ace66fbfe2ba40a53aeed76e7d 406 PRINTS PR00359 B-class P450 signature 339 348 1.8E-7 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RPIT_00815 62db86ace66fbfe2ba40a53aeed76e7d 406 PRINTS PR00359 B-class P450 signature 263 274 1.8E-7 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RPIT_00815 62db86ace66fbfe2ba40a53aeed76e7d 406 PRINTS PR00359 B-class P450 signature 348 359 1.8E-7 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RPIT_00815 62db86ace66fbfe2ba40a53aeed76e7d 406 PRINTS PR00359 B-class P450 signature 186 208 1.8E-7 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RPIT_00815 62db86ace66fbfe2ba40a53aeed76e7d 406 PRINTS PR00385 P450 superfamily signature 263 274 4.9E-7 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 RPIT_00815 62db86ace66fbfe2ba40a53aeed76e7d 406 PRINTS PR00385 P450 superfamily signature 339 348 4.9E-7 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 RPIT_00815 62db86ace66fbfe2ba40a53aeed76e7d 406 PRINTS PR00385 P450 superfamily signature 227 244 4.9E-7 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 RPIT_00815 62db86ace66fbfe2ba40a53aeed76e7d 406 PRINTS PR00385 P450 superfamily signature 348 359 4.9E-7 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 RPIT_00815 62db86ace66fbfe2ba40a53aeed76e7d 406 SUPERFAMILY SSF48264 26 383 2.49E-47 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 RPIT_12900 55d7c3833722b3056550637563595910 402 SUPERFAMILY SSF46785 16 82 3.04E-9 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_12900 55d7c3833722b3056550637563595910 402 SUPERFAMILY SSF53067 90 210 9.46E-14 T 13-10-2018 RPIT_12900 55d7c3833722b3056550637563595910 402 SUPERFAMILY SSF53067 224 394 3.15E-38 T 13-10-2018 RPIT_12900 55d7c3833722b3056550637563595910 402 Gene3D G3DSA:1.10.10.10 6 83 5.2E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_12900 55d7c3833722b3056550637563595910 402 Gene3D G3DSA:3.30.420.40 221 375 1.2E-59 T 13-10-2018 RPIT_12900 55d7c3833722b3056550637563595910 402 Pfam PF00480 ROK family 93 386 4.8E-32 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RPIT_12900 55d7c3833722b3056550637563595910 402 Gene3D G3DSA:3.30.420.40 97 385 1.2E-59 T 13-10-2018 RPIT_03350 b21886262dc1a319b6aca9d429a4fc90 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.996 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03350 b21886262dc1a319b6aca9d429a4fc90 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 9.0E-10 T 13-10-2018 RPIT_03350 b21886262dc1a319b6aca9d429a4fc90 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.7E-23 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03350 b21886262dc1a319b6aca9d429a4fc90 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03350 b21886262dc1a319b6aca9d429a4fc90 37 Pfam PF00444 Ribosomal protein L36 1 37 1.1E-19 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03350 b21886262dc1a319b6aca9d429a4fc90 37 SUPERFAMILY SSF57840 1 37 1.57E-17 T 13-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_06020 4c755bc381c3d17730366ed346247a47 426 PIRSF PIRSF001434 2 426 2.5E-126 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RPIT_06020 4c755bc381c3d17730366ed346247a47 426 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RPIT_06020 4c755bc381c3d17730366ed346247a47 426 Gene3D G3DSA:3.90.1150.10 292 426 1.0E-53 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_06020 4c755bc381c3d17730366ed346247a47 426 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 423 8.1E-141 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RPIT_06020 4c755bc381c3d17730366ed346247a47 426 Gene3D G3DSA:3.40.640.10 1 288 3.7E-91 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_06020 4c755bc381c3d17730366ed346247a47 426 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 5 423 6.9E-192 T 13-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 RPIT_06020 4c755bc381c3d17730366ed346247a47 426 SUPERFAMILY SSF53383 4 424 9.18E-117 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_12605 a44db8ee63bcf7235d7ae17018d0ba61 308 SUPERFAMILY SSF52540 2 224 2.62E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_12605 a44db8ee63bcf7235d7ae17018d0ba61 308 Pfam PF00005 ABC transporter 18 156 2.0E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_12605 a44db8ee63bcf7235d7ae17018d0ba61 308 Gene3D G3DSA:3.40.50.300 1 227 2.6E-57 T 13-10-2018 RPIT_12605 a44db8ee63bcf7235d7ae17018d0ba61 308 SMART SM00382 26 212 3.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_12410 34bdd378ca85a918427314e957935fad 693 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 128 308 8.8E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_12410 34bdd378ca85a918427314e957935fad 693 SUPERFAMILY SSF52540 375 615 1.44E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_12410 34bdd378ca85a918427314e957935fad 693 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 596 652 1.1E-7 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIT_12410 34bdd378ca85a918427314e957935fad 693 SUPERFAMILY SSF161098 103 299 8.9E-18 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_12410 34bdd378ca85a918427314e957935fad 693 SMART SM00382 404 594 7.8E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_12410 34bdd378ca85a918427314e957935fad 693 Pfam PF00005 ABC transporter 396 544 1.0E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_12410 34bdd378ca85a918427314e957935fad 693 Gene3D G3DSA:1.10.3720.10 99 307 1.5E-15 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_12410 34bdd378ca85a918427314e957935fad 693 ProSitePatterns PS00211 ABC transporters family signature. 517 531 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_12410 34bdd378ca85a918427314e957935fad 693 Gene3D G3DSA:3.40.50.300 373 683 8.4E-86 T 13-10-2018 RPIT_11320 9bb244234f175dc8475500c56de99913 221 Gene3D G3DSA:1.20.58.220 1 214 6.7E-54 T 13-10-2018 IPR038078 PhoU-like domain superfamily RPIT_11320 9bb244234f175dc8475500c56de99913 221 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 4 211 3.7E-48 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RPIT_11320 9bb244234f175dc8475500c56de99913 221 Pfam PF01895 PhoU domain 122 204 9.5E-8 T 13-10-2018 IPR026022 PhoU domain RPIT_11320 9bb244234f175dc8475500c56de99913 221 Pfam PF01895 PhoU domain 17 103 7.2E-17 T 13-10-2018 IPR026022 PhoU domain RPIT_11320 9bb244234f175dc8475500c56de99913 221 PIRSF PIRSF003107 1 217 2.2E-50 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RPIT_11320 9bb244234f175dc8475500c56de99913 221 SUPERFAMILY SSF109755 2 214 1.15E-52 T 13-10-2018 RPIT_09120 90810c47f6687f3a39f2fb4ff9b58fcd 1202 SUPERFAMILY SSF55464 3 364 2.56E-67 T 13-10-2018 RPIT_09120 90810c47f6687f3a39f2fb4ff9b58fcd 1202 Gene3D G3DSA:3.40.50.300 528 682 6.3E-36 T 13-10-2018 RPIT_09120 90810c47f6687f3a39f2fb4ff9b58fcd 1202 Pfam PF13604 AAA domain 529 717 1.9E-57 T 13-10-2018 RPIT_09120 90810c47f6687f3a39f2fb4ff9b58fcd 1202 Gene3D G3DSA:2.30.30.940 767 866 6.3E-36 T 13-10-2018 RPIT_09120 90810c47f6687f3a39f2fb4ff9b58fcd 1202 SUPERFAMILY SSF52540 527 666 9.55E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_09120 90810c47f6687f3a39f2fb4ff9b58fcd 1202 SUPERFAMILY SSF52540 640 913 1.4E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_09120 90810c47f6687f3a39f2fb4ff9b58fcd 1202 Gene3D G3DSA:3.40.50.300 683 905 6.3E-36 T 13-10-2018 RPIT_09120 90810c47f6687f3a39f2fb4ff9b58fcd 1202 Pfam PF08751 TrwC relaxase 6 363 3.0E-90 T 13-10-2018 IPR014862 TrwC relaxase RPIT_01235 5f7e122ffebfdd7e54be4d68eafe50b1 308 Gene3D G3DSA:3.40.50.300 2 242 1.9E-67 T 13-10-2018 RPIT_01235 5f7e122ffebfdd7e54be4d68eafe50b1 308 Pfam PF00005 ABC transporter 22 164 1.0E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_01235 5f7e122ffebfdd7e54be4d68eafe50b1 308 SUPERFAMILY SSF52540 4 228 7.94E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01235 5f7e122ffebfdd7e54be4d68eafe50b1 308 SMART SM00382 30 212 3.8E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_01235 5f7e122ffebfdd7e54be4d68eafe50b1 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 SUPERFAMILY SSF52518 805 1184 5.68E-126 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 SUPERFAMILY SSF53323 425 676 6.54E-72 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 PIRSF PIRSF000159 3 1190 0.0 T 13-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 Gene3D G3DSA:3.40.920.10 425 632 7.1E-76 T 13-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 969 1081 1.0E-12 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 Gene3D G3DSA:3.40.50.970 803 1183 1.9E-147 T 13-10-2018 RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 Gene3D G3DSA:3.40.50.920 263 423 2.9E-58 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 10 1180 0.0 T 13-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 Gene3D G3DSA:3.30.70.20 677 798 7.6E-31 T 13-10-2018 RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 SUPERFAMILY SSF52922 262 422 3.0E-46 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 Pfam PF10371 Domain of unknown function 637 685 1.1E-21 T 13-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 Gene3D G3DSA:3.40.50.970 6 261 6.5E-99 T 13-10-2018 RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 SMART SM00890 630 687 2.5E-28 T 13-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 434 617 1.3E-25 T 13-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 SUPERFAMILY SSF52518 6 261 6.67E-72 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 21 248 1.4E-76 T 13-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 SUPERFAMILY SSF54862 673 844 3.49E-21 T 13-10-2018 RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 272 354 9.3E-15 T 13-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 Pfam PF12838 4Fe-4S dicluster domain 696 765 1.8E-10 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIT_11095 5a449a569125f374aa96d5a1d9936407 1195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 753 764 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIT_09060 ae57bdbc7e4353f4c4388aafcdec3135 211 SMART SM00479 4 178 9.7E-23 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIT_09060 ae57bdbc7e4353f4c4388aafcdec3135 211 Pfam PF00929 Exonuclease 6 168 8.5E-25 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIT_09060 ae57bdbc7e4353f4c4388aafcdec3135 211 Hamap MF_00045 Oligoribonuclease [orn]. 1 179 37.651 T 13-10-2018 IPR022894 Oligoribonuclease GO:0000175 RPIT_09060 ae57bdbc7e4353f4c4388aafcdec3135 211 Gene3D G3DSA:3.30.420.10 1 181 2.7E-66 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 RPIT_09060 ae57bdbc7e4353f4c4388aafcdec3135 211 SUPERFAMILY SSF53098 4 177 6.96E-40 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily RPIT_10030 8ce6eed9cd81b1bbacc7a27fb6c6368e 632 PIRSF PIRSF002741 43 251 0.0019 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RPIT_10030 8ce6eed9cd81b1bbacc7a27fb6c6368e 632 PIRSF PIRSF002741 285 632 3.6E-34 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RPIT_10030 8ce6eed9cd81b1bbacc7a27fb6c6368e 632 Gene3D G3DSA:3.40.190.10 73 379 3.3E-32 T 13-10-2018 RPIT_10030 8ce6eed9cd81b1bbacc7a27fb6c6368e 632 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 140 536 1.5E-40 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain RPIT_10030 8ce6eed9cd81b1bbacc7a27fb6c6368e 632 Gene3D G3DSA:3.10.105.10 382 599 1.5E-31 T 13-10-2018 RPIT_10030 8ce6eed9cd81b1bbacc7a27fb6c6368e 632 SUPERFAMILY SSF53850 83 626 4.34E-61 T 13-10-2018 RPIT_02060 a41843c8e2080fcea8d41f4598d800f9 84 SUPERFAMILY SSF55594 1 79 4.71E-18 T 13-10-2018 IPR035895 HPr-like superfamily RPIT_02060 a41843c8e2080fcea8d41f4598d800f9 84 PRINTS PR00107 Phosphocarrier protein signature 13 29 6.1E-12 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_02060 a41843c8e2080fcea8d41f4598d800f9 84 PRINTS PR00107 Phosphocarrier protein signature 53 70 6.1E-12 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_02060 a41843c8e2080fcea8d41f4598d800f9 84 PRINTS PR00107 Phosphocarrier protein signature 38 53 6.1E-12 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_02060 a41843c8e2080fcea8d41f4598d800f9 84 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RPIT_02060 a41843c8e2080fcea8d41f4598d800f9 84 Gene3D G3DSA:3.30.1340.10 1 83 1.1E-20 T 13-10-2018 IPR035895 HPr-like superfamily RPIT_02060 a41843c8e2080fcea8d41f4598d800f9 84 Pfam PF00381 PTS HPr component phosphorylation site 4 78 8.0E-19 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_02060 a41843c8e2080fcea8d41f4598d800f9 84 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 76 1.3E-23 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_13030 2fcd307f05d2d4c05dd28c5d6e45f627 374 SMART SM01002 149 297 1.1E-73 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RPIT_13030 2fcd307f05d2d4c05dd28c5d6e45f627 374 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 13-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 RPIT_13030 2fcd307f05d2d4c05dd28c5d6e45f627 374 Gene3D G3DSA:3.40.50.720 130 305 4.3E-134 T 13-10-2018 RPIT_13030 2fcd307f05d2d4c05dd28c5d6e45f627 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 2.5E-46 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RPIT_13030 2fcd307f05d2d4c05dd28c5d6e45f627 374 SUPERFAMILY SSF52283 1 360 4.25E-66 T 13-10-2018 RPIT_13030 2fcd307f05d2d4c05dd28c5d6e45f627 374 Gene3D G3DSA:3.40.50.720 3 352 4.3E-134 T 13-10-2018 RPIT_13030 2fcd307f05d2d4c05dd28c5d6e45f627 374 SMART SM01003 4 137 1.7E-75 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RPIT_13030 2fcd307f05d2d4c05dd28c5d6e45f627 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 351 2.0E-73 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RPIT_13030 2fcd307f05d2d4c05dd28c5d6e45f627 374 PIRSF PIRSF000183 1 371 3.0E-151 T 13-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 RPIT_13030 2fcd307f05d2d4c05dd28c5d6e45f627 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 4.2E-153 T 13-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 RPIT_13030 2fcd307f05d2d4c05dd28c5d6e45f627 374 SUPERFAMILY SSF51735 137 302 6.16E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_09580 ed402565c6710c4065b1828081449fdf 130 Pfam PF12005 Protein of unknown function (DUF3499) 14 115 2.5E-38 T 13-10-2018 IPR021888 Protein of unknown function DUF3499 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 Gene3D G3DSA:3.40.50.740 303 370 2.0E-16 T 13-10-2018 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 171 181 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 SMART SM00929 108 148 1.6E-17 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 SUPERFAMILY SSF54862 101 236 1.46E-29 T 13-10-2018 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 48 65 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 Gene3D G3DSA:3.10.20.740 18 148 1.9E-32 T 13-10-2018 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 Gene3D G3DSA:3.30.70.20 157 230 1.4E-7 T 13-10-2018 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 SMART SM00926 241 295 3.2E-4 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 Gene3D G3DSA:2.20.25.90 242 294 3.8E-9 T 13-10-2018 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 18 98 1.2E-16 T 13-10-2018 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 SUPERFAMILY SSF54292 19 96 9.05E-17 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 Gene3D G3DSA:3.40.228.10 371 456 2.0E-16 T 13-10-2018 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 Gene3D G3DSA:3.40.50.740 488 683 9.3E-32 T 13-10-2018 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 SUPERFAMILY SSF50692 717 775 4.23E-5 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 21 653 7.0E-157 T 13-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 SUPERFAMILY SSF53706 232 684 3.5E-76 T 13-10-2018 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 123 135 - T 13-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 Pfam PF00384 Molybdopterin oxidoreductase 298 438 2.6E-9 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 Pfam PF00384 Molybdopterin oxidoreductase 510 655 5.4E-6 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02660 0b283c407cdbdcfbf167924761f86c6f 799 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 109 147 9.0E-14 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_04580 5534d3e7bbad277e1460cdc03f136afc 390 Pfam PF03990 Domain of unknown function (DUF348) 147 185 3.0E-7 T 13-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 RPIT_04580 5534d3e7bbad277e1460cdc03f136afc 390 Pfam PF03990 Domain of unknown function (DUF348) 91 118 2.1E-6 T 13-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 RPIT_04580 5534d3e7bbad277e1460cdc03f136afc 390 Pfam PF03990 Domain of unknown function (DUF348) 33 73 3.4E-9 T 13-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 RPIT_04580 5534d3e7bbad277e1460cdc03f136afc 390 SMART SM01208 199 277 6.7E-18 T 13-10-2018 IPR011098 G5 domain RPIT_04580 5534d3e7bbad277e1460cdc03f136afc 390 Pfam PF06737 Transglycosylase-like domain 316 390 5.9E-29 T 13-10-2018 IPR010618 Transglycosylase-like RPIT_04580 5534d3e7bbad277e1460cdc03f136afc 390 SUPERFAMILY SSF53955 315 389 2.25E-27 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily RPIT_04580 5534d3e7bbad277e1460cdc03f136afc 390 Gene3D G3DSA:2.20.230.10 154 276 8.0E-17 T 13-10-2018 RPIT_04580 5534d3e7bbad277e1460cdc03f136afc 390 Pfam PF07501 G5 domain 203 276 1.5E-16 T 13-10-2018 IPR011098 G5 domain RPIT_04580 5534d3e7bbad277e1460cdc03f136afc 390 Gene3D G3DSA:1.10.530.10 318 390 2.2E-31 T 13-10-2018 RPIT_08800 762976a86402f474a65bfda088d85032 425 SMART SM00994 10 49 3.2E-20 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RPIT_08800 762976a86402f474a65bfda088d85032 425 Gene3D G3DSA:1.10.8.60 316 422 8.9E-36 T 13-10-2018 RPIT_08800 762976a86402f474a65bfda088d85032 425 Gene3D G3DSA:3.30.50.30 2 50 4.0E-22 T 13-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily RPIT_08800 762976a86402f474a65bfda088d85032 425 SUPERFAMILY SSF57716 12 46 9.98E-11 T 13-10-2018 RPIT_08800 762976a86402f474a65bfda088d85032 425 Pfam PF06689 ClpX C4-type zinc finger 12 48 8.4E-19 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RPIT_08800 762976a86402f474a65bfda088d85032 425 SMART SM00382 115 423 8.2E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_08800 762976a86402f474a65bfda088d85032 425 Gene3D G3DSA:3.40.50.300 56 314 3.8E-105 T 13-10-2018 RPIT_08800 762976a86402f474a65bfda088d85032 425 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 395 9.5E-15 T 13-10-2018 IPR019489 Clp ATPase, C-terminal RPIT_08800 762976a86402f474a65bfda088d85032 425 Pfam PF07724 AAA domain (Cdc48 subfamily) 116 310 4.6E-48 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RPIT_08800 762976a86402f474a65bfda088d85032 425 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 412 1.1E-191 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RPIT_08800 762976a86402f474a65bfda088d85032 425 SUPERFAMILY SSF52540 60 400 1.89E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_08800 762976a86402f474a65bfda088d85032 425 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 415 51.316 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RPIT_08800 762976a86402f474a65bfda088d85032 425 SMART SM01086 317 407 7.3E-30 T 13-10-2018 IPR019489 Clp ATPase, C-terminal RPIT_08245 5ef1833cfbd6dda7c5217ca30a85d848 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 1.7E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_08245 5ef1833cfbd6dda7c5217ca30a85d848 181 Gene3D G3DSA:1.10.357.10 60 181 3.5E-19 T 13-10-2018 RPIT_08245 5ef1833cfbd6dda7c5217ca30a85d848 181 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 73 161 4.9E-8 T 13-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 RPIT_08245 5ef1833cfbd6dda7c5217ca30a85d848 181 PRINTS PR00400 Tetracycline repressor protein signature 20 43 4.1E-5 T 13-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 RPIT_08245 5ef1833cfbd6dda7c5217ca30a85d848 181 PRINTS PR00400 Tetracycline repressor protein signature 125 144 4.1E-5 T 13-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 RPIT_08245 5ef1833cfbd6dda7c5217ca30a85d848 181 Gene3D G3DSA:1.10.10.60 1 59 6.3E-25 T 13-10-2018 RPIT_08245 5ef1833cfbd6dda7c5217ca30a85d848 181 SUPERFAMILY SSF48498 68 179 2.45E-16 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RPIT_08245 5ef1833cfbd6dda7c5217ca30a85d848 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.8E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_08245 5ef1833cfbd6dda7c5217ca30a85d848 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.8E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_08245 5ef1833cfbd6dda7c5217ca30a85d848 181 SUPERFAMILY SSF46689 3 61 1.08E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_08245 5ef1833cfbd6dda7c5217ca30a85d848 181 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RPIT_03190 f3c1e2e9357ebb36a1f6f3b229b86c1b 438 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 433 2.3E-129 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RPIT_03190 f3c1e2e9357ebb36a1f6f3b229b86c1b 438 Gene3D G3DSA:1.10.3370.10 1 433 1.3E-156 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RPIT_03190 f3c1e2e9357ebb36a1f6f3b229b86c1b 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 5.1E-94 T 13-10-2018 RPIT_03190 f3c1e2e9357ebb36a1f6f3b229b86c1b 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 273 292 5.1E-94 T 13-10-2018 RPIT_03190 f3c1e2e9357ebb36a1f6f3b229b86c1b 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 317 339 5.1E-94 T 13-10-2018 RPIT_03190 f3c1e2e9357ebb36a1f6f3b229b86c1b 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 182 205 5.1E-94 T 13-10-2018 RPIT_03190 f3c1e2e9357ebb36a1f6f3b229b86c1b 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 406 424 5.1E-94 T 13-10-2018 RPIT_03190 f3c1e2e9357ebb36a1f6f3b229b86c1b 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 372 390 5.1E-94 T 13-10-2018 RPIT_03190 f3c1e2e9357ebb36a1f6f3b229b86c1b 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 5.1E-94 T 13-10-2018 RPIT_03190 f3c1e2e9357ebb36a1f6f3b229b86c1b 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 156 181 5.1E-94 T 13-10-2018 RPIT_03190 f3c1e2e9357ebb36a1f6f3b229b86c1b 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 5.1E-94 T 13-10-2018 RPIT_03190 f3c1e2e9357ebb36a1f6f3b229b86c1b 438 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 437 28.048 T 13-10-2018 IPR026593 Protein translocase subunit SecY RPIT_03190 f3c1e2e9357ebb36a1f6f3b229b86c1b 438 ProSitePatterns PS00755 Protein secY signature 1. 75 94 - T 13-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RPIT_03190 f3c1e2e9357ebb36a1f6f3b229b86c1b 438 Pfam PF00344 SecY translocase 75 421 1.3E-110 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RPIT_03190 f3c1e2e9357ebb36a1f6f3b229b86c1b 438 PIRSF PIRSF004557 1 438 9.2E-114 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RPIT_03190 f3c1e2e9357ebb36a1f6f3b229b86c1b 438 SUPERFAMILY SSF103491 1 428 1.83E-118 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RPIT_09830 95f6653e7133d4183af1eee3904d5dc3 397 Pfam PF13367 Protease prsW family 80 263 1.9E-29 T 13-10-2018 IPR026898 Protease PrsW GO:0008233 RPIT_13085 802709a1e6217e970e6ae6d524cfb210 373 Pfam PF02388 FemAB family 269 371 7.6E-17 T 13-10-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 RPIT_13085 802709a1e6217e970e6ae6d524cfb210 373 Pfam PF02388 FemAB family 6 252 1.6E-34 T 13-10-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 RPIT_13085 802709a1e6217e970e6ae6d524cfb210 373 Gene3D G3DSA:3.40.630.30 148 352 1.1E-53 T 13-10-2018 RPIT_13085 802709a1e6217e970e6ae6d524cfb210 373 SUPERFAMILY SSF55729 185 367 1.34E-41 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_13085 802709a1e6217e970e6ae6d524cfb210 373 SUPERFAMILY SSF55729 3 177 2.33E-31 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_13085 802709a1e6217e970e6ae6d524cfb210 373 Gene3D G3DSA:3.40.630.30 4 140 5.7E-21 T 13-10-2018 RPIT_10275 f95f44ca7aab96e30a080ab755bd246e 685 SUPERFAMILY SSF52518 3 337 1.02E-98 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_10275 f95f44ca7aab96e30a080ab755bd246e 685 ProSitePatterns PS00802 Transketolase signature 2. 486 502 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RPIT_10275 f95f44ca7aab96e30a080ab755bd246e 685 Gene3D G3DSA:3.40.50.970 1 347 1.6E-109 T 13-10-2018 RPIT_10275 f95f44ca7aab96e30a080ab755bd246e 685 SMART SM00861 364 544 2.9E-62 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RPIT_10275 f95f44ca7aab96e30a080ab755bd246e 685 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 9 351 1.6E-129 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RPIT_10275 f95f44ca7aab96e30a080ab755bd246e 685 TIGRFAM TIGR00232 tktlase_bact: transketolase 11 684 9.4E-234 T 13-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 RPIT_10275 f95f44ca7aab96e30a080ab755bd246e 685 Gene3D G3DSA:3.40.50.920 559 685 8.5E-42 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 RPIT_10275 f95f44ca7aab96e30a080ab755bd246e 685 SUPERFAMILY SSF52922 553 685 3.27E-40 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 RPIT_10275 f95f44ca7aab96e30a080ab755bd246e 685 Pfam PF02780 Transketolase, C-terminal domain 569 675 2.2E-13 T 13-10-2018 IPR033248 Transketolase, C-terminal domain RPIT_10275 f95f44ca7aab96e30a080ab755bd246e 685 Pfam PF02779 Transketolase, pyrimidine binding domain 364 543 4.3E-43 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RPIT_10275 f95f44ca7aab96e30a080ab755bd246e 685 Gene3D G3DSA:3.40.50.970 350 551 2.1E-68 T 13-10-2018 RPIT_10275 f95f44ca7aab96e30a080ab755bd246e 685 SUPERFAMILY SSF52518 360 545 4.49E-60 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_03275 895f65ca4103bd222b98a15d88dfbf87 159 Gene3D G3DSA:2.30.110.10 4 156 4.0E-43 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 RPIT_03275 895f65ca4103bd222b98a15d88dfbf87 159 SUPERFAMILY SSF50475 7 128 1.59E-27 T 13-10-2018 RPIT_03275 895f65ca4103bd222b98a15d88dfbf87 159 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 7 148 4.7E-39 T 13-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain RPIT_00010 360936260a79f1b2fef26bee4f3e999f 306 Gene3D G3DSA:3.40.50.620 13 216 1.1E-56 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_00010 360936260a79f1b2fef26bee4f3e999f 306 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 36 260 3.3E-47 T 13-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 RPIT_00010 360936260a79f1b2fef26bee4f3e999f 306 PIRSF PIRSF002936 7 306 3.7E-136 T 13-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 RPIT_00010 360936260a79f1b2fef26bee4f3e999f 306 SUPERFAMILY SSF52402 12 214 1.58E-63 T 13-10-2018 RPIT_00010 360936260a79f1b2fef26bee4f3e999f 306 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 15 306 5.8E-136 T 13-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 RPIT_03535 3304c084dc64e8d9324e642cf0729ea7 725 Gene3D G3DSA:1.20.1640.10 148 335 9.1E-17 T 13-10-2018 RPIT_03535 3304c084dc64e8d9324e642cf0729ea7 725 Pfam PF03176 MMPL family 496 702 2.1E-50 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 RPIT_03535 3304c084dc64e8d9324e642cf0729ea7 725 Pfam PF03176 MMPL family 75 365 1.2E-51 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 RPIT_03535 3304c084dc64e8d9324e642cf0729ea7 725 SUPERFAMILY SSF82866 132 331 1.83E-31 T 13-10-2018 RPIT_03535 3304c084dc64e8d9324e642cf0729ea7 725 SUPERFAMILY SSF82866 499 700 2.88E-30 T 13-10-2018 RPIT_04880 562852cdbb4dd2871c8aa775374d1401 396 SMART SM00729 26 249 1.7E-54 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 RPIT_04880 562852cdbb4dd2871c8aa775374d1401 396 Pfam PF04055 Radical SAM superfamily 31 204 2.3E-19 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIT_04880 562852cdbb4dd2871c8aa775374d1401 396 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 27 357 3.6E-79 T 13-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 RPIT_04880 562852cdbb4dd2871c8aa775374d1401 396 SUPERFAMILY SSF102114 23 395 4.19E-114 T 13-10-2018 RPIT_04880 562852cdbb4dd2871c8aa775374d1401 396 Gene3D G3DSA:3.80.30.20 11 327 6.6E-98 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe RPIT_06205 8ae294cd10a1be8fb088855f4f49e3e9 355 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 352 56.666 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 RPIT_06205 8ae294cd10a1be8fb088855f4f49e3e9 355 PIRSF PIRSF001455 3 354 1.7E-87 T 13-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 RPIT_06205 8ae294cd10a1be8fb088855f4f49e3e9 355 Gene3D G3DSA:1.20.1090.10 166 355 5.5E-52 T 13-10-2018 RPIT_06205 8ae294cd10a1be8fb088855f4f49e3e9 355 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 12 347 1.8E-93 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 RPIT_06205 8ae294cd10a1be8fb088855f4f49e3e9 355 SUPERFAMILY SSF56796 1 351 1.44E-88 T 13-10-2018 RPIT_06205 8ae294cd10a1be8fb088855f4f49e3e9 355 Pfam PF01761 3-dehydroquinate synthase 60 321 2.4E-83 T 13-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 RPIT_06205 8ae294cd10a1be8fb088855f4f49e3e9 355 Gene3D G3DSA:3.40.50.1970 1 165 1.6E-51 T 13-10-2018 RPIT_01300 7c1df515edad6dca4e3957fcccc78ff6 514 Gene3D G3DSA:3.40.50.300 3 255 1.2E-56 T 13-10-2018 RPIT_01300 7c1df515edad6dca4e3957fcccc78ff6 514 Gene3D G3DSA:3.40.50.300 278 508 4.4E-44 T 13-10-2018 RPIT_01300 7c1df515edad6dca4e3957fcccc78ff6 514 SUPERFAMILY SSF52540 14 241 1.95E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01300 7c1df515edad6dca4e3957fcccc78ff6 514 SMART SM00382 295 492 1.3E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_01300 7c1df515edad6dca4e3957fcccc78ff6 514 SMART SM00382 40 228 1.8E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_01300 7c1df515edad6dca4e3957fcccc78ff6 514 Pfam PF00005 ABC transporter 31 180 4.4E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_01300 7c1df515edad6dca4e3957fcccc78ff6 514 ProSitePatterns PS00211 ABC transporters family signature. 413 427 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_01300 7c1df515edad6dca4e3957fcccc78ff6 514 Pfam PF00005 ABC transporter 289 440 2.1E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_01300 7c1df515edad6dca4e3957fcccc78ff6 514 SUPERFAMILY SSF52540 286 497 1.84E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_00395 4cd8f0c84d50b737a44ad644de759b27 204 SUPERFAMILY SSF46689 7 87 5.82E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_00395 4cd8f0c84d50b737a44ad644de759b27 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.4E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_00395 4cd8f0c84d50b737a44ad644de759b27 204 Gene3D G3DSA:1.10.357.10 5 201 4.8E-36 T 13-10-2018 RPIT_02865 ad1e5c46e79da6d33a42af34283ff936 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 6.5E-53 T 13-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RPIT_02865 ad1e5c46e79da6d33a42af34283ff936 233 SUPERFAMILY SSF56808 5 224 7.85E-81 T 13-10-2018 IPR023674 Ribosomal protein L1-like RPIT_02865 ad1e5c46e79da6d33a42af34283ff936 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 120 138 - T 13-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_02865 ad1e5c46e79da6d33a42af34283ff936 233 Gene3D G3DSA:3.30.190.20 20 224 3.9E-80 T 13-10-2018 RPIT_02865 ad1e5c46e79da6d33a42af34283ff936 233 Gene3D G3DSA:3.40.50.790 67 158 3.9E-80 T 13-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RPIT_02865 ad1e5c46e79da6d33a42af34283ff936 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 228 42.339 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RPIT_02865 ad1e5c46e79da6d33a42af34283ff936 233 PIRSF PIRSF002155 1 226 9.1E-72 T 13-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_02865 ad1e5c46e79da6d33a42af34283ff936 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 2 226 2.4E-100 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RPIT_00435 371d80d404ae351e9806218f6b948e19 266 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 248 2.2E-42 T 13-10-2018 RPIT_00435 371d80d404ae351e9806218f6b948e19 266 ProSitePatterns PS01229 Hypothetical cof family signature 2. 209 231 - T 13-10-2018 RPIT_00435 371d80d404ae351e9806218f6b948e19 266 Gene3D G3DSA:3.40.50.1000 6 247 2.1E-51 T 13-10-2018 IPR023214 HAD superfamily RPIT_00435 371d80d404ae351e9806218f6b948e19 266 SUPERFAMILY SSF56784 4 259 7.69E-53 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_00435 371d80d404ae351e9806218f6b948e19 266 Gene3D G3DSA:3.30.1240.10 87 184 2.1E-51 T 13-10-2018 RPIT_09585 7c0f6c11a4f4c5987e82ddc6cac45f93 145 SUPERFAMILY SSF55486 34 135 4.03E-16 T 13-10-2018 RPIT_09585 7c0f6c11a4f4c5987e82ddc6cac45f93 145 Pfam PF06262 Zincin-like metallopeptidase 77 135 5.2E-7 T 13-10-2018 IPR010428 Zincin-like metallopeptidase RPIT_09585 7c0f6c11a4f4c5987e82ddc6cac45f93 145 Gene3D G3DSA:3.30.2010.20 34 137 1.5E-6 T 13-10-2018 IPR038555 Zincin-like metallopeptidase superfamily RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 SMART SM00387 39 199 2.5E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 SMART SM00433 43 682 1.5E-238 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 Gene3D G3DSA:3.30.565.10 11 244 5.5E-74 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 SUPERFAMILY SSF54211 292 437 3.79E-35 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 PRINTS PR01159 DNA gyrase subunit B signature 421 441 1.8E-31 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 PRINTS PR01159 DNA gyrase subunit B signature 517 526 1.8E-31 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 PRINTS PR01159 DNA gyrase subunit B signature 357 373 1.8E-31 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 PRINTS PR01159 DNA gyrase subunit B signature 220 233 1.8E-31 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 PRINTS PR01159 DNA gyrase subunit B signature 658 674 1.8E-31 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 PRINTS PR01159 DNA gyrase subunit B signature 642 654 1.8E-31 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 PRINTS PR01159 DNA gyrase subunit B signature 287 305 1.8E-31 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 PRINTS PR01159 DNA gyrase subunit B signature 205 220 1.8E-31 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 PRINTS PR01159 DNA gyrase subunit B signature 14 24 1.8E-31 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 Pfam PF01751 Toprim domain 466 574 1.8E-13 T 13-10-2018 IPR006171 TOPRIM domain RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 Gene3D G3DSA:3.40.50.670 446 691 1.4E-83 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 Gene3D G3DSA:3.30.230.10 270 445 3.1E-47 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 ProSitePatterns PS00177 DNA topoisomerase II signature. 469 477 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 39 144 1.7E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 SUPERFAMILY SSF55874 14 235 2.17E-53 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 SUPERFAMILY SSF56719 441 680 2.46E-73 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 622 677 2.5E-23 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 PRINTS PR00418 DNA topoisomerase II family signature 571 583 1.5E-53 T 13-10-2018 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 PRINTS PR00418 DNA topoisomerase II family signature 551 568 1.5E-53 T 13-10-2018 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 PRINTS PR00418 DNA topoisomerase II family signature 313 326 1.5E-53 T 13-10-2018 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 PRINTS PR00418 DNA topoisomerase II family signature 121 135 1.5E-53 T 13-10-2018 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 PRINTS PR00418 DNA topoisomerase II family signature 43 58 1.5E-53 T 13-10-2018 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 PRINTS PR00418 DNA topoisomerase II family signature 621 637 1.5E-53 T 13-10-2018 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 PRINTS PR00418 DNA topoisomerase II family signature 78 91 1.5E-53 T 13-10-2018 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 PRINTS PR00418 DNA topoisomerase II family signature 533 549 1.5E-53 T 13-10-2018 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 PRINTS PR00418 DNA topoisomerase II family signature 467 481 1.5E-53 T 13-10-2018 RPIT_05460 100a58bef5c2f777d451b6fa02d80e46 691 Pfam PF00204 DNA gyrase B 247 437 5.1E-47 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RPIT_04685 6b93fd8e11fe938f0e56802fe31744be 199 Gene3D G3DSA:1.20.1280.290 97 198 7.0E-6 T 13-10-2018 RPIT_04685 6b93fd8e11fe938f0e56802fe31744be 199 Gene3D G3DSA:1.20.1280.290 1 84 7.2E-15 T 13-10-2018 RPIT_04685 6b93fd8e11fe938f0e56802fe31744be 199 Pfam PF04193 PQ loop repeat 3 36 3.9E-5 T 13-10-2018 IPR006603 PQ-loop repeat RPIT_07770 10ac8d58a359cca431045618be998786 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 120 2.4E-21 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIT_07770 10ac8d58a359cca431045618be998786 338 SUPERFAMILY SSF50129 1 161 2.28E-46 T 13-10-2018 IPR011032 GroES-like superfamily RPIT_07770 10ac8d58a359cca431045618be998786 338 SUPERFAMILY SSF51735 143 304 2.96E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_07770 10ac8d58a359cca431045618be998786 338 Gene3D G3DSA:3.40.50.720 153 300 7.8E-93 T 13-10-2018 RPIT_07770 10ac8d58a359cca431045618be998786 338 SMART SM00829 8 336 0.0043 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIT_07770 10ac8d58a359cca431045618be998786 338 Gene3D G3DSA:3.90.180.10 4 327 7.8E-93 T 13-10-2018 RPIT_07770 10ac8d58a359cca431045618be998786 338 Pfam PF00107 Zinc-binding dehydrogenase 173 298 2.8E-23 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIT_07770 10ac8d58a359cca431045618be998786 338 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RPIT_11875 70f450798f7ecd2b3d18daea783cf219 832 Gene3D G3DSA:3.40.50.2000 485 813 0.0 T 13-10-2018 RPIT_11875 70f450798f7ecd2b3d18daea783cf219 832 Pfam PF00343 Carbohydrate phosphorylase 116 827 0.0 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 RPIT_11875 70f450798f7ecd2b3d18daea783cf219 832 Gene3D G3DSA:3.40.50.2000 45 830 0.0 T 13-10-2018 RPIT_11875 70f450798f7ecd2b3d18daea783cf219 832 SUPERFAMILY SSF53756 21 830 2.83E-296 T 13-10-2018 RPIT_11875 70f450798f7ecd2b3d18daea783cf219 832 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 28 827 0.0 T 13-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 RPIT_11875 70f450798f7ecd2b3d18daea783cf219 832 PIRSF PIRSF000460 16 832 1.2E-223 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 RPIT_11875 70f450798f7ecd2b3d18daea783cf219 832 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 673 685 - T 13-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 RPIT_04375 3ae1c31951d17bb058d7c949599f50ff 277 Gene3D G3DSA:3.40.50.1820 3 273 1.9E-65 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_04375 3ae1c31951d17bb058d7c949599f50ff 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 5.3E-9 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_04375 3ae1c31951d17bb058d7c949599f50ff 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 5.3E-9 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_04375 3ae1c31951d17bb058d7c949599f50ff 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 217 231 5.3E-9 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_04375 3ae1c31951d17bb058d7c949599f50ff 277 Pfam PF00561 alpha/beta hydrolase fold 23 255 1.3E-22 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_04375 3ae1c31951d17bb058d7c949599f50ff 277 PRINTS PR00412 Epoxide hydrolase signature 48 63 6.8E-9 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 RPIT_04375 3ae1c31951d17bb058d7c949599f50ff 277 PRINTS PR00412 Epoxide hydrolase signature 215 231 6.8E-9 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 RPIT_04375 3ae1c31951d17bb058d7c949599f50ff 277 PRINTS PR00412 Epoxide hydrolase signature 28 46 6.8E-9 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 RPIT_04375 3ae1c31951d17bb058d7c949599f50ff 277 PRINTS PR00412 Epoxide hydrolase signature 249 271 6.8E-9 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 RPIT_04375 3ae1c31951d17bb058d7c949599f50ff 277 SUPERFAMILY SSF53474 3 275 1.32E-56 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_00625 1f3dbfa13b4b88d45989e4d4658cac62 231 Pfam PF02698 DUF218 domain 62 199 5.7E-26 T 13-10-2018 IPR003848 Domain of unknown function DUF218 RPIT_03985 53cda13864b5ea78622b1e253a5ab2de 145 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 145 44.255 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RPIT_03985 53cda13864b5ea78622b1e253a5ab2de 145 Pfam PF02381 MraZ protein, putative antitoxin-like 2 70 3.1E-15 T 13-10-2018 IPR020603 MraZ domain RPIT_03985 53cda13864b5ea78622b1e253a5ab2de 145 Pfam PF02381 MraZ protein, putative antitoxin-like 74 135 9.1E-14 T 13-10-2018 IPR020603 MraZ domain RPIT_03985 53cda13864b5ea78622b1e253a5ab2de 145 SUPERFAMILY SSF89447 2 134 1.05E-40 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily RPIT_03985 53cda13864b5ea78622b1e253a5ab2de 145 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 128 6.0E-42 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RPIT_03985 53cda13864b5ea78622b1e253a5ab2de 145 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 135 1.8E-32 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RPIT_03985 53cda13864b5ea78622b1e253a5ab2de 145 Gene3D G3DSA:2.40.330.20 1 140 3.4E-41 T 13-10-2018 IPR038619 MraZ superfamily RPIT_13775 69b24c7e14d755db8de7868a815e3800 392 SUPERFAMILY SSF53756 27 379 2.32E-66 T 13-10-2018 RPIT_13775 69b24c7e14d755db8de7868a815e3800 392 Gene3D G3DSA:3.40.50.2000 193 366 5.8E-42 T 13-10-2018 RPIT_13775 69b24c7e14d755db8de7868a815e3800 392 Pfam PF00534 Glycosyl transferases group 1 197 361 2.2E-26 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 RPIT_13775 69b24c7e14d755db8de7868a815e3800 392 Gene3D G3DSA:3.40.50.2000 26 192 1.2E-7 T 13-10-2018 RPIT_13775 69b24c7e14d755db8de7868a815e3800 392 Pfam PF13579 Glycosyl transferase 4-like domain 30 168 1.1E-15 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RPIT_10730 b0564b292212ffe1980ce301ff9754e8 210 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 4 95 2.0E-17 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RPIT_10730 b0564b292212ffe1980ce301ff9754e8 210 SUPERFAMILY SSF50715 4 180 4.36E-46 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RPIT_10730 b0564b292212ffe1980ce301ff9754e8 210 Gene3D G3DSA:2.40.240.10 2 95 9.5E-25 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RPIT_10730 b0564b292212ffe1980ce301ff9754e8 210 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 180 25.375 T 13-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RPIT_10730 b0564b292212ffe1980ce301ff9754e8 210 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 100 178 6.3E-18 T 13-10-2018 IPR020057 Ribosomal protein L25, beta domain RPIT_10730 b0564b292212ffe1980ce301ff9754e8 210 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 177 2.2E-39 T 13-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RPIT_10730 b0564b292212ffe1980ce301ff9754e8 210 Gene3D G3DSA:2.170.120.20 98 187 3.2E-17 T 13-10-2018 IPR037121 Ribosomal protein L25, C-terminal RPIT_10730 b0564b292212ffe1980ce301ff9754e8 210 Pfam PF01386 Ribosomal L25p family 6 92 1.2E-22 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RPIT_14505 89f748c6daf7dc4e8b68635755fde096 177 Pfam PF00436 Single-strand binding protein family 7 107 3.3E-32 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 RPIT_14505 89f748c6daf7dc4e8b68635755fde096 177 Hamap MF_00984 Single-stranded DNA-binding protein. 4 113 31.496 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 RPIT_14505 89f748c6daf7dc4e8b68635755fde096 177 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 6 136 3.6E-33 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 RPIT_14505 89f748c6daf7dc4e8b68635755fde096 177 Gene3D G3DSA:2.40.50.140 1 119 1.0E-44 T 13-10-2018 RPIT_14505 89f748c6daf7dc4e8b68635755fde096 177 SUPERFAMILY SSF50249 7 177 3.67E-49 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_03300 1e8f9baae397367253ab83604ece65e7 278 Gene3D G3DSA:3.40.50.2300 2 267 2.3E-85 T 13-10-2018 RPIT_03300 1e8f9baae397367253ab83604ece65e7 278 Pfam PF13407 Periplasmic binding protein domain 11 255 2.5E-57 T 13-10-2018 IPR025997 Periplasmic binding protein RPIT_03300 1e8f9baae397367253ab83604ece65e7 278 SUPERFAMILY SSF53822 2 277 1.04E-81 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_03300 1e8f9baae397367253ab83604ece65e7 278 Gene3D G3DSA:3.40.50.2300 103 274 2.3E-85 T 13-10-2018 RPIT_03035 799f0525c33ef2b47b32ab70ef181cc4 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.5E-47 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03035 799f0525c33ef2b47b32ab70ef181cc4 103 Gene3D G3DSA:3.30.70.600 2 103 3.2E-38 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily RPIT_03035 799f0525c33ef2b47b32ab70ef181cc4 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 13-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03035 799f0525c33ef2b47b32ab70ef181cc4 103 SUPERFAMILY SSF54999 5 102 1.83E-38 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily RPIT_03035 799f0525c33ef2b47b32ab70ef181cc4 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.9E-36 T 13-10-2018 IPR027486 Ribosomal protein S10 domain RPIT_03035 799f0525c33ef2b47b32ab70ef181cc4 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 2.8E-20 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03035 799f0525c33ef2b47b32ab70ef181cc4 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 2.8E-20 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03035 799f0525c33ef2b47b32ab70ef181cc4 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 2.8E-20 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03035 799f0525c33ef2b47b32ab70ef181cc4 103 SMART SM01403 7 101 3.3E-59 T 13-10-2018 IPR027486 Ribosomal protein S10 domain RPIT_03035 799f0525c33ef2b47b32ab70ef181cc4 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.966 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_07335 44f2bd1ae96917433acc469fd8e913bc 1047 Pfam PF02018 Carbohydrate binding domain 183 300 1.5E-14 T 13-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 RPIT_07335 44f2bd1ae96917433acc469fd8e913bc 1047 Pfam PF02018 Carbohydrate binding domain 23 138 3.8E-10 T 13-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 RPIT_07335 44f2bd1ae96917433acc469fd8e913bc 1047 Pfam PF03422 Carbohydrate binding module (family 6) 736 866 1.6E-19 T 13-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 RPIT_07335 44f2bd1ae96917433acc469fd8e913bc 1047 SUPERFAMILY SSF49785 21 178 1.89E-16 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_07335 44f2bd1ae96917433acc469fd8e913bc 1047 SMART SM00606 728 867 1.7E-18 T 13-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 RPIT_07335 44f2bd1ae96917433acc469fd8e913bc 1047 Gene3D G3DSA:2.60.120.260 16 178 3.7E-27 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_07335 44f2bd1ae96917433acc469fd8e913bc 1047 Gene3D G3DSA:2.60.120.260 179 345 3.2E-25 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_07335 44f2bd1ae96917433acc469fd8e913bc 1047 Gene3D G3DSA:2.115.10.20 362 725 4.8E-80 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RPIT_07335 44f2bd1ae96917433acc469fd8e913bc 1047 Gene3D G3DSA:2.60.120.260 726 867 1.4E-30 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_07335 44f2bd1ae96917433acc469fd8e913bc 1047 SUPERFAMILY SSF75005 369 731 1.71E-40 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RPIT_07335 44f2bd1ae96917433acc469fd8e913bc 1047 SUPERFAMILY SSF49785 181 340 5.1E-14 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_07335 44f2bd1ae96917433acc469fd8e913bc 1047 Pfam PF04616 Glycosyl hydrolases family 43 376 713 9.9E-20 T 13-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 RPIT_07335 44f2bd1ae96917433acc469fd8e913bc 1047 SUPERFAMILY SSF49785 727 866 3.89E-17 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_03130 d8de99475c618251c06361e8aa6a8d0a 255 SUPERFAMILY SSF51735 1 233 5.43E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_03130 d8de99475c618251c06361e8aa6a8d0a 255 Gene3D G3DSA:3.40.50.720 2 231 5.2E-53 T 13-10-2018 RPIT_03130 d8de99475c618251c06361e8aa6a8d0a 255 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 162 3.8E-26 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 RPIT_12455 5687f9fc57ff2298e4e7688ebf27ff24 228 SUPERFAMILY SSF52172 3 174 1.77E-37 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_12455 5687f9fc57ff2298e4e7688ebf27ff24 228 Gene3D G3DSA:3.40.50.2300 1 118 2.6E-33 T 13-10-2018 RPIT_12455 5687f9fc57ff2298e4e7688ebf27ff24 228 Gene3D G3DSA:1.10.10.10 119 224 2.3E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_12455 5687f9fc57ff2298e4e7688ebf27ff24 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 1.4E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_12455 5687f9fc57ff2298e4e7688ebf27ff24 228 SMART SM00862 146 220 2.7E-24 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_12455 5687f9fc57ff2298e4e7688ebf27ff24 228 Pfam PF00072 Response regulator receiver domain 5 111 1.2E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_12455 5687f9fc57ff2298e4e7688ebf27ff24 228 SMART SM00448 3 111 5.8E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_10165 dee5b849529c38e7b5158e19e1126d9d 408 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 13 32 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 RPIT_10165 dee5b849529c38e7b5158e19e1126d9d 408 SUPERFAMILY SSF53448 5 358 8.45E-67 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_10165 dee5b849529c38e7b5158e19e1126d9d 408 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 196 206 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 RPIT_10165 dee5b849529c38e7b5158e19e1126d9d 408 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 4 405 47.25 T 13-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 RPIT_10165 dee5b849529c38e7b5158e19e1126d9d 408 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 7 378 2.5E-140 T 13-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 RPIT_10165 dee5b849529c38e7b5158e19e1126d9d 408 Gene3D G3DSA:3.90.550.10 3 286 7.5E-78 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_10165 dee5b849529c38e7b5158e19e1126d9d 408 Gene3D G3DSA:2.160.10.10 287 407 6.5E-35 T 13-10-2018 RPIT_10165 dee5b849529c38e7b5158e19e1126d9d 408 Pfam PF00483 Nucleotidyl transferase 9 276 3.2E-65 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 RPIT_10165 dee5b849529c38e7b5158e19e1126d9d 408 SUPERFAMILY SSF51161 299 406 3.19E-17 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily RPIT_10165 dee5b849529c38e7b5158e19e1126d9d 408 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 98 106 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 RPIT_13005 ce06725958c89b3a5ab1d22b4e0cca65 199 SUPERFAMILY SSF56784 3 192 4.52E-29 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_13005 ce06725958c89b3a5ab1d22b4e0cca65 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 164 2.9E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 RPIT_13005 ce06725958c89b3a5ab1d22b4e0cca65 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 2.9E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 RPIT_13005 ce06725958c89b3a5ab1d22b4e0cca65 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 126 142 2.9E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 RPIT_13005 ce06725958c89b3a5ab1d22b4e0cca65 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 2.9E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 RPIT_13005 ce06725958c89b3a5ab1d22b4e0cca65 199 Gene3D G3DSA:3.40.50.1000 1 196 4.9E-30 T 13-10-2018 IPR023214 HAD superfamily RPIT_13005 ce06725958c89b3a5ab1d22b4e0cca65 199 Pfam PF00702 haloacid dehalogenase-like hydrolase 76 174 3.7E-7 T 13-10-2018 RPIT_13005 ce06725958c89b3a5ab1d22b4e0cca65 199 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 179 2.0E-14 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 RPIT_07125 cf87c4f006c877b8c990893560ecd483 307 PIRSF PIRSF005303 2 306 1.4E-84 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 RPIT_07125 cf87c4f006c877b8c990893560ecd483 307 SUPERFAMILY SSF56042 142 298 1.92E-29 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily RPIT_07125 cf87c4f006c877b8c990893560ecd483 307 SUPERFAMILY SSF55326 4 136 2.09E-31 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily RPIT_07125 cf87c4f006c877b8c990893560ecd483 307 Gene3D G3DSA:3.30.1330.10 2 138 1.3E-39 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily RPIT_07125 cf87c4f006c877b8c990893560ecd483 307 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 306 2.3E-79 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 RPIT_07125 cf87c4f006c877b8c990893560ecd483 307 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 240 2.4E-7 T 13-10-2018 IPR010918 PurM-like, C-terminal domain RPIT_07125 cf87c4f006c877b8c990893560ecd483 307 Gene3D G3DSA:3.90.650.10 144 306 6.5E-47 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily RPIT_07125 cf87c4f006c877b8c990893560ecd483 307 Pfam PF00586 AIR synthase related protein, N-terminal domain 27 136 1.2E-22 T 13-10-2018 IPR016188 PurM-like, N-terminal domain RPIT_07125 cf87c4f006c877b8c990893560ecd483 307 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 306 26.192 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 RPIT_04260 9b6ed6435a814fa5b89ace21c12c3d09 243 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 234 2.2E-58 T 13-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 RPIT_04260 9b6ed6435a814fa5b89ace21c12c3d09 243 Gene3D G3DSA:3.40.50.1360 1 235 2.4E-71 T 13-10-2018 RPIT_04260 9b6ed6435a814fa5b89ace21c12c3d09 243 SUPERFAMILY SSF100950 4 236 1.32E-58 T 13-10-2018 IPR037171 NagB/RpiA transferase-like RPIT_04260 9b6ed6435a814fa5b89ace21c12c3d09 243 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 225 3.9E-63 T 13-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 RPIT_01770 76ec508bc6d9d8cd9058ec361a0d1c18 375 Gene3D G3DSA:3.40.190.10 62 360 6.3E-93 T 13-10-2018 RPIT_01770 76ec508bc6d9d8cd9058ec361a0d1c18 375 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 58 374 1.7E-65 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RPIT_01770 76ec508bc6d9d8cd9058ec361a0d1c18 375 Pfam PF12849 PBP superfamily domain 49 345 2.7E-54 T 13-10-2018 IPR024370 PBP domain RPIT_01770 76ec508bc6d9d8cd9058ec361a0d1c18 375 Gene3D G3DSA:3.40.190.10 142 314 6.3E-93 T 13-10-2018 RPIT_01770 76ec508bc6d9d8cd9058ec361a0d1c18 375 SUPERFAMILY SSF53850 57 374 2.88E-79 T 13-10-2018 RPIT_01770 76ec508bc6d9d8cd9058ec361a0d1c18 375 PIRSF PIRSF002756 5 375 3.3E-110 T 13-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RPIT_01645 e4c9afa431710e883f7727584a98d20c 257 SUPERFAMILY SSF48371 5 192 2.02E-24 T 13-10-2018 IPR016024 Armadillo-type fold RPIT_01645 e4c9afa431710e883f7727584a98d20c 257 Pfam PF13646 HEAT repeats 71 146 1.6E-7 T 13-10-2018 RPIT_01645 e4c9afa431710e883f7727584a98d20c 257 Pfam PF13646 HEAT repeats 159 244 4.2E-11 T 13-10-2018 RPIT_01645 e4c9afa431710e883f7727584a98d20c 257 Gene3D G3DSA:1.25.10.10 2 157 6.5E-17 T 13-10-2018 IPR011989 Armadillo-like helical RPIT_01645 e4c9afa431710e883f7727584a98d20c 257 Pfam PF03130 PBS lyase HEAT-like repeat 20 44 1.9E-4 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RPIT_01645 e4c9afa431710e883f7727584a98d20c 257 Gene3D G3DSA:1.25.10.110 158 230 9.3E-12 T 13-10-2018 RPIT_01645 e4c9afa431710e883f7727584a98d20c 257 SMART SM00567 E-Z type HEAT repeats 110 139 120.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RPIT_01645 e4c9afa431710e883f7727584a98d20c 257 SMART SM00567 E-Z type HEAT repeats 171 203 21.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RPIT_01645 e4c9afa431710e883f7727584a98d20c 257 SMART SM00567 E-Z type HEAT repeats 49 77 940.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RPIT_01645 e4c9afa431710e883f7727584a98d20c 257 SMART SM00567 E-Z type HEAT repeats 205 247 52.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RPIT_01645 e4c9afa431710e883f7727584a98d20c 257 SMART SM00567 E-Z type HEAT repeats 17 46 0.001 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RPIT_01645 e4c9afa431710e883f7727584a98d20c 257 SMART SM00567 E-Z type HEAT repeats 141 169 1100.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 PRINTS PR00145 Argininosuccinate lyase family signature 148 168 1.4E-51 T 13-10-2018 RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 PRINTS PR00145 Argininosuccinate lyase family signature 107 129 1.4E-51 T 13-10-2018 RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 PRINTS PR00145 Argininosuccinate lyase family signature 199 215 1.4E-51 T 13-10-2018 RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 PRINTS PR00145 Argininosuccinate lyase family signature 316 335 1.4E-51 T 13-10-2018 RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 PRINTS PR00145 Argininosuccinate lyase family signature 237 261 1.4E-51 T 13-10-2018 RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 PRINTS PR00145 Argininosuccinate lyase family signature 281 297 1.4E-51 T 13-10-2018 RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 Gene3D G3DSA:1.10.275.50 5 112 4.1E-28 T 13-10-2018 RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 ProSitePatterns PS00163 Fumarate lyases signature. 281 290 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 Pfam PF00206 Lyase 11 306 4.4E-67 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 Gene3D G3DSA:1.10.40.30 370 440 5.9E-131 T 13-10-2018 RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 Hamap MF_00006 Argininosuccinate lyase [argH]. 7 459 39.048 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 PRINTS PR00149 Fumarate lyase superfamily signature 237 264 1.2E-25 T 13-10-2018 IPR000362 Fumarate lyase family RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 PRINTS PR00149 Fumarate lyase superfamily signature 281 297 1.2E-25 T 13-10-2018 IPR000362 Fumarate lyase family RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 PRINTS PR00149 Fumarate lyase superfamily signature 153 171 1.2E-25 T 13-10-2018 IPR000362 Fumarate lyase family RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 PRINTS PR00149 Fumarate lyase superfamily signature 108 126 1.2E-25 T 13-10-2018 IPR000362 Fumarate lyase family RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 SUPERFAMILY SSF48557 11 459 8.95E-132 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 TIGRFAM TIGR00838 argH: argininosuccinate lyase 8 459 1.4E-173 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 Pfam PF14698 Argininosuccinate lyase C-terminal 369 437 2.7E-22 T 13-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RPIT_08195 8abc3f8a4d450c5c099c567c791f4a6b 474 Gene3D G3DSA:1.20.200.10 113 453 5.9E-131 T 13-10-2018 RPIT_05165 76c4bf4fd6b160c4ea0c57403ab660f5 330 Pfam PF01882 Protein of unknown function DUF58 49 133 7.3E-13 T 13-10-2018 IPR002881 Domain of unknown function DUF58 RPIT_08495 21741ede4fc1a51847e2794e02b70284 220 SUPERFAMILY SSF56784 2 208 4.55E-52 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_08495 21741ede4fc1a51847e2794e02b70284 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 184 3.3E-27 T 13-10-2018 RPIT_08495 21741ede4fc1a51847e2794e02b70284 220 Gene3D G3DSA:1.10.150.240 17 85 1.2E-48 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RPIT_08495 21741ede4fc1a51847e2794e02b70284 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 121 184 1.4E-14 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 RPIT_08495 21741ede4fc1a51847e2794e02b70284 220 Gene3D G3DSA:3.40.50.1000 6 205 1.2E-48 T 13-10-2018 IPR023214 HAD superfamily RPIT_06135 7c53b9a4b26e549592ae6a53335dc591 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 315 327 2.9E-16 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase RPIT_06135 7c53b9a4b26e549592ae6a53335dc591 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 250 260 2.9E-16 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase RPIT_06135 7c53b9a4b26e549592ae6a53335dc591 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 417 434 2.9E-16 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase RPIT_06135 7c53b9a4b26e549592ae6a53335dc591 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 365 381 2.9E-16 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase RPIT_06135 7c53b9a4b26e549592ae6a53335dc591 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 2.9E-16 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase RPIT_06135 7c53b9a4b26e549592ae6a53335dc591 434 Gene3D G3DSA:1.10.940.10 1 138 1.8E-34 T 13-10-2018 IPR035926 NusB-like superfamily RPIT_06135 7c53b9a4b26e549592ae6a53335dc591 434 SUPERFAMILY SSF48013 1 155 1.96E-28 T 13-10-2018 IPR035926 NusB-like superfamily RPIT_06135 7c53b9a4b26e549592ae6a53335dc591 434 Pfam PF01189 16S rRNA methyltransferase RsmB/F 242 432 4.0E-41 T 13-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 RPIT_06135 7c53b9a4b26e549592ae6a53335dc591 434 SUPERFAMILY SSF53335 151 433 2.58E-41 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_06135 7c53b9a4b26e549592ae6a53335dc591 434 Pfam PF01029 NusB family 1 124 4.1E-23 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RPIT_06135 7c53b9a4b26e549592ae6a53335dc591 434 Gene3D G3DSA:3.40.50.150 146 433 9.6E-51 T 13-10-2018 RPIT_00680 0139883b4b460e7553114769382b53fc 914 Gene3D G3DSA:1.10.45.10 474 506 1.9E-5 T 13-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RPIT_00680 0139883b4b460e7553114769382b53fc 914 Gene3D G3DSA:3.30.70.2740 381 465 1.2E-7 T 13-10-2018 RPIT_00680 0139883b4b460e7553114769382b53fc 914 Pfam PF13183 4Fe-4S dicluster domain 527 598 1.6E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIT_00680 0139883b4b460e7553114769382b53fc 914 Pfam PF02754 Cysteine-rich domain 693 778 3.4E-4 T 13-10-2018 IPR004017 Cysteine-rich domain RPIT_00680 0139883b4b460e7553114769382b53fc 914 SUPERFAMILY SSF55103 258 512 2.94E-49 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RPIT_00680 0139883b4b460e7553114769382b53fc 914 SUPERFAMILY SSF46548 491 610 2.27E-18 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIT_00680 0139883b4b460e7553114769382b53fc 914 Gene3D G3DSA:1.10.1060.10 511 620 7.1E-8 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIT_00680 0139883b4b460e7553114769382b53fc 914 Pfam PF01565 FAD binding domain 29 165 3.5E-33 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIT_00680 0139883b4b460e7553114769382b53fc 914 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 530 541 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIT_00680 0139883b4b460e7553114769382b53fc 914 Pfam PF02913 FAD linked oxidases, C-terminal domain 255 504 3.2E-51 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RPIT_00680 0139883b4b460e7553114769382b53fc 914 Gene3D G3DSA:3.30.465.40 4 183 5.0E-29 T 13-10-2018 RPIT_00680 0139883b4b460e7553114769382b53fc 914 SUPERFAMILY SSF56176 12 253 2.49E-47 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 RPIT_11310 7cca8a584570092541908f434a7af13e 225 SUPERFAMILY SSF46894 126 223 8.79E-30 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIT_11310 7cca8a584570092541908f434a7af13e 225 Gene3D G3DSA:1.10.10.10 123 225 2.4E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_11310 7cca8a584570092541908f434a7af13e 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 222 1.4E-26 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_11310 7cca8a584570092541908f434a7af13e 225 Gene3D G3DSA:3.40.50.2300 1 122 5.6E-38 T 13-10-2018 RPIT_11310 7cca8a584570092541908f434a7af13e 225 SMART SM00862 147 223 9.6E-28 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_11310 7cca8a584570092541908f434a7af13e 225 SUPERFAMILY SSF52172 1 122 5.12E-42 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_11310 7cca8a584570092541908f434a7af13e 225 Pfam PF00072 Response regulator receiver domain 4 113 1.4E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_11310 7cca8a584570092541908f434a7af13e 225 SMART SM00448 2 112 3.0E-45 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_03240 40691db4d1fd0abebe37b87d38d2c301 1151 SUPERFAMILY SSF102588 45 208 5.75E-20 T 13-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 RPIT_03240 40691db4d1fd0abebe37b87d38d2c301 1151 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 355 426 2.0E-5 T 13-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain RPIT_03240 40691db4d1fd0abebe37b87d38d2c301 1151 Gene3D G3DSA:2.60.40.1190 575 823 1.5E-18 T 13-10-2018 RPIT_03240 40691db4d1fd0abebe37b87d38d2c301 1151 Pfam PF06452 Carbohydrate family 9 binding domain-like 584 823 2.9E-9 T 13-10-2018 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6717|MetaCyc: PWY-6784 RPIT_03240 40691db4d1fd0abebe37b87d38d2c301 1151 Pfam PF02585 GlcNAc-PI de-N-acetylase 50 183 3.6E-13 T 13-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 RPIT_03240 40691db4d1fd0abebe37b87d38d2c301 1151 Gene3D G3DSA:3.40.50.10320 34 224 9.6E-26 T 13-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 RPIT_03240 40691db4d1fd0abebe37b87d38d2c301 1151 SUPERFAMILY SSF49344 575 822 5.49E-13 T 13-10-2018 RPIT_08680 d0fdc0d030202c0c65b747465b5df3e7 279 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 117 2.1E-35 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RPIT_08680 d0fdc0d030202c0c65b747465b5df3e7 279 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 272 5.0E-87 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RPIT_08680 d0fdc0d030202c0c65b747465b5df3e7 279 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 132 219 4.3E-21 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RPIT_08680 d0fdc0d030202c0c65b747465b5df3e7 279 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 273 39.862 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RPIT_08680 d0fdc0d030202c0c65b747465b5df3e7 279 SUPERFAMILY SSF57716 224 272 3.42E-16 T 13-10-2018 RPIT_08680 d0fdc0d030202c0c65b747465b5df3e7 279 Gene3D G3DSA:1.10.8.50 134 273 2.7E-43 T 13-10-2018 RPIT_08680 d0fdc0d030202c0c65b747465b5df3e7 279 SUPERFAMILY SSF81624 2 137 2.62E-36 T 13-10-2018 IPR035937 MutM-like, N-terminal RPIT_08680 d0fdc0d030202c0c65b747465b5df3e7 279 Gene3D G3DSA:3.20.190.10 2 129 3.4E-37 T 13-10-2018 IPR035937 MutM-like, N-terminal RPIT_08680 d0fdc0d030202c0c65b747465b5df3e7 279 SUPERFAMILY SSF46946 132 221 1.62E-24 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RPIT_08680 d0fdc0d030202c0c65b747465b5df3e7 279 SMART SM01232 132 224 2.6E-38 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RPIT_08680 d0fdc0d030202c0c65b747465b5df3e7 279 SMART SM00898 2 119 5.6E-44 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RPIT_08680 d0fdc0d030202c0c65b747465b5df3e7 279 Pfam PF06827 Zinc finger found in FPG and IleRS 245 272 4.5E-11 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 RPIT_08680 d0fdc0d030202c0c65b747465b5df3e7 279 ProSitePatterns PS01242 Zinc finger FPG-type signature. 248 272 - T 13-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 RPIT_12930 642d357e5b41e8b1e98d6ccf74111cfe 516 SUPERFAMILY SSF52540 305 511 1.16E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_12930 642d357e5b41e8b1e98d6ccf74111cfe 516 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 3 513 2.5E-169 T 13-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 RPIT_12930 642d357e5b41e8b1e98d6ccf74111cfe 516 Pfam PF00005 ABC transporter 328 473 8.8E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_12930 642d357e5b41e8b1e98d6ccf74111cfe 516 SMART SM00382 336 515 1.0E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_12930 642d357e5b41e8b1e98d6ccf74111cfe 516 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_12930 642d357e5b41e8b1e98d6ccf74111cfe 516 Gene3D G3DSA:1.20.1560.10 1 299 3.5E-36 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_12930 642d357e5b41e8b1e98d6ccf74111cfe 516 SUPERFAMILY SSF90123 3 299 1.19E-39 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_12930 642d357e5b41e8b1e98d6ccf74111cfe 516 Gene3D G3DSA:3.40.50.300 306 515 1.7E-57 T 13-10-2018 RPIT_12930 642d357e5b41e8b1e98d6ccf74111cfe 516 Pfam PF00664 ABC transporter transmembrane region 5 258 2.8E-21 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 RPIT_00825 6de56863cef3b204550c7777851b81b0 153 SUPERFAMILY SSF54593 4 129 5.77E-26 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_00825 6de56863cef3b204550c7777851b81b0 153 Gene3D G3DSA:3.10.180.10 2 138 2.5E-42 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_00825 6de56863cef3b204550c7777851b81b0 153 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 1.1E-7 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIT_04745 23dffa98e501c429b2a942de3aefcda6 555 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 3 203 1.4E-43 T 13-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04745 23dffa98e501c429b2a942de3aefcda6 555 Gene3D G3DSA:3.40.50.10090 319 430 1.9E-11 T 13-10-2018 RPIT_04745 23dffa98e501c429b2a942de3aefcda6 555 Gene3D G3DSA:3.40.50.10090 431 554 3.8E-10 T 13-10-2018 RPIT_04745 23dffa98e501c429b2a942de3aefcda6 555 Pfam PF02602 Uroporphyrinogen-III synthase HemD 334 537 9.7E-31 T 13-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04745 23dffa98e501c429b2a942de3aefcda6 555 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 217 287 1.5E-4 T 13-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04745 23dffa98e501c429b2a942de3aefcda6 555 PRINTS PR00151 Porphobilinogen deaminase signature 137 154 7.6E-14 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04745 23dffa98e501c429b2a942de3aefcda6 555 PRINTS PR00151 Porphobilinogen deaminase signature 118 135 7.6E-14 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04745 23dffa98e501c429b2a942de3aefcda6 555 PRINTS PR00151 Porphobilinogen deaminase signature 69 88 7.6E-14 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04745 23dffa98e501c429b2a942de3aefcda6 555 PRINTS PR00151 Porphobilinogen deaminase signature 221 238 7.6E-14 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04745 23dffa98e501c429b2a942de3aefcda6 555 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 3 288 1.0E-58 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04745 23dffa98e501c429b2a942de3aefcda6 555 SUPERFAMILY SSF69618 325 552 1.83E-31 T 13-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04745 23dffa98e501c429b2a942de3aefcda6 555 Gene3D G3DSA:3.40.190.10 3 205 1.6E-50 T 13-10-2018 RPIT_04745 23dffa98e501c429b2a942de3aefcda6 555 SUPERFAMILY SSF54782 211 297 1.31E-8 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04745 23dffa98e501c429b2a942de3aefcda6 555 Gene3D G3DSA:3.30.160.40 213 297 2.0E-8 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RPIT_04745 23dffa98e501c429b2a942de3aefcda6 555 SUPERFAMILY SSF53850 2 208 8.9E-45 T 13-10-2018 RPIT_04745 23dffa98e501c429b2a942de3aefcda6 555 Gene3D G3DSA:3.40.190.10 94 190 1.6E-50 T 13-10-2018 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 SUPERFAMILY SSF51717 336 607 5.63E-75 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 Gene3D G3DSA:3.20.20.20 326 621 5.8E-97 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 PIRSF PIRSF000381 1 1155 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 Gene3D G3DSA:1.10.288.10 904 961 5.4E-49 T 13-10-2018 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 947 1155 4.6E-32 T 13-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 SUPERFAMILY SSF47644 633 715 1.05E-23 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 SUPERFAMILY SSF56507 880 1154 4.45E-83 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 Gene3D G3DSA:3.40.50.280 720 854 6.3E-37 T 13-10-2018 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 Gene3D G3DSA:1.10.1240.10 626 713 5.4E-29 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 TIGRFAM TIGR02082 metH: methionine synthase 7 1153 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 SUPERFAMILY SSF82282 3 378 1.14E-105 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 Gene3D G3DSA:3.10.196.10 890 1154 5.4E-49 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 SMART SM01018 634 716 3.1E-39 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 Pfam PF02310 B12 binding domain 723 841 1.1E-16 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 Gene3D G3DSA:3.20.20.330 1 315 2.3E-91 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 Pfam PF02607 B12 binding domain 637 709 2.7E-24 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 Pfam PF02574 Homocysteine S-methyltransferase 12 303 8.2E-62 T 13-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 Pfam PF00809 Pterin binding enzyme 339 575 5.7E-44 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_06120 e5fa3f268e2e0bdb24d59976110a4eb9 1155 SUPERFAMILY SSF52242 718 851 3.3E-34 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 RPIT_14795 f435c6bfeebf2125f9ea6fb61c6d16eb 148 Gene3D G3DSA:2.60.40.790 1 129 7.3E-31 T 13-10-2018 IPR008978 HSP20-like chaperone RPIT_14795 f435c6bfeebf2125f9ea6fb61c6d16eb 148 SUPERFAMILY SSF49764 6 128 5.86E-32 T 13-10-2018 IPR008978 HSP20-like chaperone RPIT_14795 f435c6bfeebf2125f9ea6fb61c6d16eb 148 Pfam PF00011 Hsp20/alpha crystallin family 30 127 1.4E-20 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain RPIT_03430 2a5440d9343d784ebff4c781bf100f11 222 Pfam PF02390 Putative methyltransferase 45 211 3.8E-43 T 13-10-2018 RPIT_03430 2a5440d9343d784ebff4c781bf100f11 222 Gene3D G3DSA:3.40.50.150 1 221 4.7E-62 T 13-10-2018 RPIT_03430 2a5440d9343d784ebff4c781bf100f11 222 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 35 216 9.9E-44 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 RPIT_03430 2a5440d9343d784ebff4c781bf100f11 222 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 20 217 26.523 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 RPIT_03430 2a5440d9343d784ebff4c781bf100f11 222 SUPERFAMILY SSF53335 32 215 1.07E-28 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_00650 82f6551abe436845cde7aacdb07f5fda 544 SMART SM00836 429 544 1.9E-47 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RPIT_00650 82f6551abe436845cde7aacdb07f5fda 544 Pfam PF05746 DALR anticodon binding domain 429 544 3.6E-35 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RPIT_00650 82f6551abe436845cde7aacdb07f5fda 544 Hamap MF_00123 Arginine--tRNA ligase [argS]. 2 544 25.664 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RPIT_00650 82f6551abe436845cde7aacdb07f5fda 544 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 117 128 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_00650 82f6551abe436845cde7aacdb07f5fda 544 SUPERFAMILY SSF52374 107 422 6.48E-77 T 13-10-2018 RPIT_00650 82f6551abe436845cde7aacdb07f5fda 544 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 14 80 6.0E-20 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RPIT_00650 82f6551abe436845cde7aacdb07f5fda 544 Gene3D G3DSA:1.10.730.10 423 544 2.4E-40 T 13-10-2018 RPIT_00650 82f6551abe436845cde7aacdb07f5fda 544 SMART SM01016 2 81 2.7E-26 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RPIT_00650 82f6551abe436845cde7aacdb07f5fda 544 SUPERFAMILY SSF55190 15 91 1.19E-19 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 RPIT_00650 82f6551abe436845cde7aacdb07f5fda 544 Gene3D G3DSA:3.30.1360.70 4 100 8.9E-25 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 RPIT_00650 82f6551abe436845cde7aacdb07f5fda 544 Gene3D G3DSA:3.40.50.620 105 421 4.5E-93 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_00650 82f6551abe436845cde7aacdb07f5fda 544 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 140 9.7E-23 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RPIT_00650 82f6551abe436845cde7aacdb07f5fda 544 PRINTS PR01038 Arginyl-tRNA synthetase signature 109 124 9.7E-23 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RPIT_00650 82f6551abe436845cde7aacdb07f5fda 544 PRINTS PR01038 Arginyl-tRNA synthetase signature 291 312 9.7E-23 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RPIT_00650 82f6551abe436845cde7aacdb07f5fda 544 PRINTS PR01038 Arginyl-tRNA synthetase signature 148 161 9.7E-23 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RPIT_00650 82f6551abe436845cde7aacdb07f5fda 544 Pfam PF00750 tRNA synthetases class I (R) 104 390 3.7E-94 T 13-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 RPIT_00650 82f6551abe436845cde7aacdb07f5fda 544 SUPERFAMILY SSF47323 423 544 1.05E-37 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_00650 82f6551abe436845cde7aacdb07f5fda 544 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 20 544 3.5E-145 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 Gene3D G3DSA:3.40.50.300 157 348 1.1E-69 T 13-10-2018 RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 Gene3D G3DSA:1.10.8.60 720 823 5.3E-28 T 13-10-2018 RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 SUPERFAMILY SSF52540 491 804 7.63E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 339 3.1E-11 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 68 6.5E-17 T 13-10-2018 IPR004176 Clp, N-terminal RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 142 9.9E-17 T 13-10-2018 IPR004176 Clp, N-terminal RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 SUPERFAMILY SSF81923 3 143 7.95E-32 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 620 638 1.6E-39 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 591 609 1.6E-39 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 546 564 1.6E-39 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 653 667 1.6E-39 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 Gene3D G3DSA:3.40.50.300 495 719 6.8E-86 T 13-10-2018 RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 SUPERFAMILY SSF52540 166 469 2.44E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 Gene3D G3DSA:1.10.1780.10 1 148 9.3E-61 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 Pfam PF07724 AAA domain (Cdc48 subfamily) 541 714 1.0E-53 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 300 312 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 Pfam PF02151 UvrB/uvrC motif 431 457 9.1E-6 T 13-10-2018 IPR001943 UVR domain GO:0005515 RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 720 800 2.7E-24 T 13-10-2018 IPR019489 Clp ATPase, C-terminal RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 Gene3D G3DSA:4.10.860.10 414 472 8.5E-44 T 13-10-2018 RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 SMART SM00382 542 721 2.0E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 SMART SM00382 205 349 4.5E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 Gene3D G3DSA:1.10.8.60 352 486 8.5E-44 T 13-10-2018 RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 SMART SM01086 720 811 3.8E-35 T 13-10-2018 IPR019489 Clp ATPase, C-terminal RPIT_01615 770d2053c8361c552b30ecfca5b8d8c5 836 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 576 594 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 RPIT_06545 781fb321bc7f2bee689b5cd34eb52701 716 SUPERFAMILY SSF51011 596 692 1.22E-11 T 13-10-2018 RPIT_06545 781fb321bc7f2bee689b5cd34eb52701 716 Gene3D G3DSA:2.60.40.10 3 137 5.7E-36 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_06545 781fb321bc7f2bee689b5cd34eb52701 716 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 12 97 2.7E-16 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RPIT_06545 781fb321bc7f2bee689b5cd34eb52701 716 SUPERFAMILY SSF81296 11 139 2.4E-32 T 13-10-2018 IPR014756 Immunoglobulin E-set RPIT_06545 781fb321bc7f2bee689b5cd34eb52701 716 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 9 690 1.9E-245 T 13-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 RPIT_06545 781fb321bc7f2bee689b5cd34eb52701 716 Gene3D G3DSA:3.20.20.80 143 582 1.4E-164 T 13-10-2018 RPIT_06545 781fb321bc7f2bee689b5cd34eb52701 716 SUPERFAMILY SSF51445 143 575 4.82E-123 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_06545 781fb321bc7f2bee689b5cd34eb52701 716 Pfam PF00128 Alpha amylase, catalytic domain 188 277 8.9E-8 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_06545 781fb321bc7f2bee689b5cd34eb52701 716 SMART SM00642 158 568 9.1E-7 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_06030 4771c39b55fef668cdaa660b317610a7 229 Pfam PF12697 Alpha/beta hydrolase family 3 222 1.9E-14 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_06030 4771c39b55fef668cdaa660b317610a7 229 SUPERFAMILY SSF53474 3 226 1.23E-22 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_06030 4771c39b55fef668cdaa660b317610a7 229 Gene3D G3DSA:3.40.50.1820 2 228 6.4E-31 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_06715 50aa6a61b1413732f44c55b27acf3821 215 Gene3D G3DSA:3.90.870.10 6 214 7.8E-68 T 13-10-2018 RPIT_06715 50aa6a61b1413732f44c55b27acf3821 215 SUPERFAMILY SSF55821 16 212 3.66E-55 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily RPIT_06715 50aa6a61b1413732f44c55b27acf3821 215 Pfam PF01300 Telomere recombination 24 199 5.3E-49 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 RPIT_06715 50aa6a61b1413732f44c55b27acf3821 215 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 14 207 5.5E-55 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 RPIT_06155 d9a781a4120dd6b07e3e376a573eae98 118 Pfam PF01192 RNA polymerase Rpb6 16 79 3.2E-15 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 RPIT_06155 d9a781a4120dd6b07e3e376a573eae98 118 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 8 77 5.7E-21 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_06155 d9a781a4120dd6b07e3e376a573eae98 118 SMART SM01409 15 79 3.3E-15 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 RPIT_06155 d9a781a4120dd6b07e3e376a573eae98 118 Gene3D G3DSA:3.90.940.10 8 100 5.2E-21 T 13-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 RPIT_06155 d9a781a4120dd6b07e3e376a573eae98 118 SUPERFAMILY SSF63562 8 90 1.62E-23 T 13-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 RPIT_06155 d9a781a4120dd6b07e3e376a573eae98 118 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 8 80 14.804 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02010 dd27dbc328b7a50ce906d6b9b5e51959 914 SUPERFAMILY SSF52743 148 611 2.09E-75 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 RPIT_02010 dd27dbc328b7a50ce906d6b9b5e51959 914 Gene3D G3DSA:3.50.30.30 356 542 6.3E-103 T 13-10-2018 RPIT_02010 dd27dbc328b7a50ce906d6b9b5e51959 914 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 238 248 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site RPIT_02010 dd27dbc328b7a50ce906d6b9b5e51959 914 PRINTS PR00723 Subtilisin serine protease family (S8) signature 167 186 4.6E-20 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related RPIT_02010 dd27dbc328b7a50ce906d6b9b5e51959 914 PRINTS PR00723 Subtilisin serine protease family (S8) signature 234 247 4.6E-20 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related RPIT_02010 dd27dbc328b7a50ce906d6b9b5e51959 914 PRINTS PR00723 Subtilisin serine protease family (S8) signature 541 557 4.6E-20 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related RPIT_02010 dd27dbc328b7a50ce906d6b9b5e51959 914 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 172 183 - T 13-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site RPIT_02010 dd27dbc328b7a50ce906d6b9b5e51959 914 SUPERFAMILY SSF52025 406 476 2.62E-6 T 13-10-2018 RPIT_02010 dd27dbc328b7a50ce906d6b9b5e51959 914 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 542 552 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site RPIT_02010 dd27dbc328b7a50ce906d6b9b5e51959 914 Gene3D G3DSA:2.60.40.1710 609 740 7.8E-8 T 13-10-2018 RPIT_02010 dd27dbc328b7a50ce906d6b9b5e51959 914 Pfam PF06280 Fn3-like domain 620 730 4.4E-9 T 13-10-2018 IPR010435 Fn3-like domain GO:0004252|GO:0005618|GO:0016020 RPIT_02010 dd27dbc328b7a50ce906d6b9b5e51959 914 Pfam PF02225 PA domain 388 471 1.6E-9 T 13-10-2018 IPR003137 PA domain RPIT_02010 dd27dbc328b7a50ce906d6b9b5e51959 914 Pfam PF00082 Subtilase family 167 600 1.8E-62 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIT_02010 dd27dbc328b7a50ce906d6b9b5e51959 914 Gene3D G3DSA:3.40.50.200 167 604 6.3E-103 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 RPIT_13310 41f759ca2c81dadbd4951dd9612ee5d9 551 Pfam PF05960 Bacterial protein of unknown function (DUF885) 25 550 8.6E-168 T 13-10-2018 IPR010281 Protein of unknown function DUF885 RPIT_14070 665a69e42b7c95269fd76b2f7846ad49 588 SUPERFAMILY SSF51735 133 260 9.05E-12 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_14070 665a69e42b7c95269fd76b2f7846ad49 588 Gene3D G3DSA:3.40.50.720 131 255 5.0E-30 T 13-10-2018 RPIT_14070 665a69e42b7c95269fd76b2f7846ad49 588 Pfam PF13727 CoA-binding domain 75 229 4.5E-9 T 13-10-2018 RPIT_14070 665a69e42b7c95269fd76b2f7846ad49 588 SUPERFAMILY SSF51735 271 533 3.95E-61 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_14070 665a69e42b7c95269fd76b2f7846ad49 588 Gene3D G3DSA:3.40.50.720 269 583 1.1E-102 T 13-10-2018 RPIT_14070 665a69e42b7c95269fd76b2f7846ad49 588 Pfam PF02719 Polysaccharide biosynthesis protein 274 551 1.3E-100 T 13-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RPIT_14020 1ccc0b397d99a105ada854947613432f 279 Pfam PF00535 Glycosyl transferase family 2 7 129 5.8E-21 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RPIT_14020 1ccc0b397d99a105ada854947613432f 279 Gene3D G3DSA:3.90.550.10 1 211 1.3E-41 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_14020 1ccc0b397d99a105ada854947613432f 279 SUPERFAMILY SSF53448 4 205 1.45E-42 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 714 728 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 SUPERFAMILY SSF56059 679 952 2.47E-92 T 13-10-2018 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 680 878 6.2E-33 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 148 340 6.1E-67 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 SUPERFAMILY SSF56059 146 406 8.31E-101 T 13-10-2018 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 431 548 1.1E-38 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 Gene3D G3DSA:3.30.470.20 119 408 1.7E-117 T 13-10-2018 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1072 0.0 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 Pfam PF02142 MGS-like domain 979 1069 3.6E-18 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 SMART SM01096 427 548 4.7E-64 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 SUPERFAMILY SSF52440 559 679 6.62E-44 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1089 12.899 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 Gene3D G3DSA:3.40.50.20 1 116 3.3E-50 T 13-10-2018 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 Gene3D G3DSA:3.30.470.20 670 954 1.2E-101 T 13-10-2018 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 170 184 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 SUPERFAMILY SSF48108 402 554 1.7E-46 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 303 310 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.7E-62 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.7E-62 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 174 186 1.7E-62 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 385 403 1.7E-62 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 245 262 1.7E-62 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 210 229 1.7E-62 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 303 332 1.7E-62 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 SUPERFAMILY SSF52440 1 127 2.73E-49 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 Gene3D G3DSA:1.10.1030.10 414 554 7.6E-42 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 843 850 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 SUPERFAMILY SSF52335 961 1099 5.89E-31 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 Gene3D G3DSA:3.40.50.20 555 667 1.4E-46 T 13-10-2018 RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 Gene3D G3DSA:3.40.50.1380 957 1100 9.6E-37 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily RPIT_06180 8d24e31ad1ddd9f44393bface492b9e8 1100 SMART SM00851 975 1069 1.1E-26 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain RPIT_05830 54223854b4697e41e02f69ba4b13d379 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 265 3.4E-12 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_05830 54223854b4697e41e02f69ba4b13d379 277 SUPERFAMILY SSF161098 36 264 4.19E-47 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_05830 54223854b4697e41e02f69ba4b13d379 277 Gene3D G3DSA:1.10.3720.10 31 275 1.8E-54 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_00310 572be899a30ea652b421fe4aa7100fbc 158 Gene3D G3DSA:2.40.128.20 1 158 2.0E-48 T 13-10-2018 IPR012674 Calycin RPIT_00310 572be899a30ea652b421fe4aa7100fbc 158 Pfam PF08768 Domain of unknown function (DUF1794) 5 154 1.3E-37 T 13-10-2018 IPR014878 Domain of unknown function DUF1794 RPIT_00310 572be899a30ea652b421fe4aa7100fbc 158 SUPERFAMILY SSF50814 2 155 1.26E-38 T 13-10-2018 IPR012674 Calycin RPIT_08665 24f61002f6c0a3748ac3f5a215d743bb 377 SUPERFAMILY SSF47364 74 153 4.19E-15 T 13-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 RPIT_08665 24f61002f6c0a3748ac3f5a215d743bb 377 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 102 376 57.296 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RPIT_08665 24f61002f6c0a3748ac3f5a215d743bb 377 Pfam PF00448 SRP54-type protein, GTPase domain 177 375 7.2E-74 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RPIT_08665 24f61002f6c0a3748ac3f5a215d743bb 377 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 104 374 1.5E-101 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RPIT_08665 24f61002f6c0a3748ac3f5a215d743bb 377 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 349 362 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RPIT_08665 24f61002f6c0a3748ac3f5a215d743bb 377 Gene3D G3DSA:3.40.50.300 177 364 3.0E-99 T 13-10-2018 RPIT_08665 24f61002f6c0a3748ac3f5a215d743bb 377 SMART SM00382 176 326 1.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_08665 24f61002f6c0a3748ac3f5a215d743bb 377 SMART SM00963 79 159 1.5E-17 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RPIT_08665 24f61002f6c0a3748ac3f5a215d743bb 377 Pfam PF02881 SRP54-type protein, helical bundle domain 90 155 2.9E-9 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RPIT_08665 24f61002f6c0a3748ac3f5a215d743bb 377 SMART SM00962 177 376 2.6E-104 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RPIT_08665 24f61002f6c0a3748ac3f5a215d743bb 377 Gene3D G3DSA:1.20.120.140 77 373 3.0E-99 T 13-10-2018 RPIT_08665 24f61002f6c0a3748ac3f5a215d743bb 377 SUPERFAMILY SSF52540 175 375 8.44E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_12890 168789536b6e0519274a5caa9acd24da 581 Pfam PF00005 ABC transporter 354 501 3.1E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_12890 168789536b6e0519274a5caa9acd24da 581 SUPERFAMILY SSF90123 9 318 1.7E-70 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_12890 168789536b6e0519274a5caa9acd24da 581 SMART SM00382 363 555 1.5E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_12890 168789536b6e0519274a5caa9acd24da 581 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_12890 168789536b6e0519274a5caa9acd24da 581 Gene3D G3DSA:3.40.50.300 326 576 2.7E-79 T 13-10-2018 RPIT_12890 168789536b6e0519274a5caa9acd24da 581 SUPERFAMILY SSF52540 327 573 2.3E-83 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_12890 168789536b6e0519274a5caa9acd24da 581 Pfam PF00664 ABC transporter transmembrane region 21 288 1.6E-41 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 RPIT_12890 168789536b6e0519274a5caa9acd24da 581 Gene3D G3DSA:1.20.1560.10 2 319 5.6E-81 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_02895 f156450e99270b077b2405dfba54f9a7 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 273 3.4E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_02895 f156450e99270b077b2405dfba54f9a7 315 SUPERFAMILY SSF161098 54 261 2.22E-39 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_02895 f156450e99270b077b2405dfba54f9a7 315 Gene3D G3DSA:1.10.3720.10 44 278 1.2E-48 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_02945 110ca7fd7a548b19c8606e08de72b496 925 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 662 767 1.4E-9 T 13-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 RPIT_02945 110ca7fd7a548b19c8606e08de72b496 925 Gene3D G3DSA:3.20.20.300 83 483 1.1E-60 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 RPIT_02945 110ca7fd7a548b19c8606e08de72b496 925 SUPERFAMILY SSF52279 650 767 1.57E-13 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 RPIT_02945 110ca7fd7a548b19c8606e08de72b496 925 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 132 462 3.0E-25 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RPIT_02945 110ca7fd7a548b19c8606e08de72b496 925 SUPERFAMILY SSF51445 87 498 4.32E-48 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_02945 110ca7fd7a548b19c8606e08de72b496 925 Gene3D G3DSA:3.40.50.1700 487 767 6.8E-14 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 RPIT_00655 116b29b2008e21dd76cce8f091872ca9 256 Gene3D G3DSA:3.30.420.40 1 108 9.1E-21 T 13-10-2018 RPIT_00655 116b29b2008e21dd76cce8f091872ca9 256 Pfam PF00480 ROK family 5 161 2.7E-17 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RPIT_00655 116b29b2008e21dd76cce8f091872ca9 256 SUPERFAMILY SSF53067 1 249 6.68E-33 T 13-10-2018 RPIT_00655 116b29b2008e21dd76cce8f091872ca9 256 Gene3D G3DSA:3.30.420.40 109 252 3.1E-33 T 13-10-2018 RPIT_00085 da57ffaa2c852de56e3926a906d9757e 755 Gene3D G3DSA:2.60.40.10 583 669 3.4E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_00085 da57ffaa2c852de56e3926a906d9757e 755 SUPERFAMILY SSF53300 391 575 1.49E-20 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily RPIT_00085 da57ffaa2c852de56e3926a906d9757e 755 SUPERFAMILY SSF49299 577 657 1.83E-6 T 13-10-2018 IPR035986 PKD domain superfamily RPIT_00085 da57ffaa2c852de56e3926a906d9757e 755 Pfam PF00092 von Willebrand factor type A domain 392 573 4.0E-11 T 13-10-2018 IPR002035 von Willebrand factor, type A RPIT_00085 da57ffaa2c852de56e3926a906d9757e 755 SUPERFAMILY SSF52266 34 372 4.44E-29 T 13-10-2018 RPIT_00085 da57ffaa2c852de56e3926a906d9757e 755 Gene3D G3DSA:3.40.50.410 387 582 9.8E-20 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily RPIT_00085 da57ffaa2c852de56e3926a906d9757e 755 SMART SM00327 390 578 3.8E-12 T 13-10-2018 IPR002035 von Willebrand factor, type A RPIT_06275 d48f8d5f2e8a54e8a3ea6996a0af0e16 447 Pfam PF03129 Anticodon binding domain 353 403 3.6E-5 T 13-10-2018 IPR004154 Anticodon-binding RPIT_06275 d48f8d5f2e8a54e8a3ea6996a0af0e16 447 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 422 2.5E-98 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 RPIT_06275 d48f8d5f2e8a54e8a3ea6996a0af0e16 447 SUPERFAMILY SSF52954 350 421 9.0E-10 T 13-10-2018 RPIT_06275 d48f8d5f2e8a54e8a3ea6996a0af0e16 447 PIRSF PIRSF001549 1 429 9.2E-86 T 13-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 RPIT_06275 d48f8d5f2e8a54e8a3ea6996a0af0e16 447 Gene3D G3DSA:3.30.930.10 2 343 9.2E-84 T 13-10-2018 RPIT_06275 d48f8d5f2e8a54e8a3ea6996a0af0e16 447 SUPERFAMILY SSF55681 5 340 2.99E-60 T 13-10-2018 RPIT_06275 d48f8d5f2e8a54e8a3ea6996a0af0e16 447 Pfam PF13393 Histidyl-tRNA synthetase 9 332 7.9E-27 T 13-10-2018 RPIT_06275 d48f8d5f2e8a54e8a3ea6996a0af0e16 447 Gene3D G3DSA:3.40.50.800 347 425 1.3E-11 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily RPIT_07185 a1c06d99f908bb69d5ddbe64cf597fb2 296 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 21 248 1.3E-6 T 13-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 RPIT_07185 a1c06d99f908bb69d5ddbe64cf597fb2 296 SUPERFAMILY SSF56300 21 277 2.4E-18 T 13-10-2018 RPIT_11805 cbe40d56b7582bbec8e60efa50eca852 760 Gene3D G3DSA:3.20.20.80 126 290 4.0E-7 T 13-10-2018 RPIT_11805 cbe40d56b7582bbec8e60efa50eca852 760 TIGRFAM TIGR02455 TreS_stutzeri: trehalose synthase 81 756 3.3E-263 T 13-10-2018 IPR012665 Trehalose synthase RPIT_11805 cbe40d56b7582bbec8e60efa50eca852 760 Pfam PF00128 Alpha amylase, catalytic domain 197 389 6.0E-7 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_11805 cbe40d56b7582bbec8e60efa50eca852 760 Gene3D G3DSA:3.20.20.80 315 639 2.1E-11 T 13-10-2018 RPIT_11805 cbe40d56b7582bbec8e60efa50eca852 760 SUPERFAMILY SSF51445 106 669 2.11E-34 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_05755 4eac962479f1132eba5b9ea47e56a23f 406 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 144 161 1.1E-15 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05755 4eac962479f1132eba5b9ea47e56a23f 406 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 183 199 1.1E-15 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05755 4eac962479f1132eba5b9ea47e56a23f 406 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 1.1E-15 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05755 4eac962479f1132eba5b9ea47e56a23f 406 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 111 127 1.1E-15 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05755 4eac962479f1132eba5b9ea47e56a23f 406 Pfam PF00365 Phosphofructokinase 4 337 2.9E-34 T 13-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05755 4eac962479f1132eba5b9ea47e56a23f 406 SUPERFAMILY SSF53784 3 400 5.23E-76 T 13-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05755 4eac962479f1132eba5b9ea47e56a23f 406 Hamap MF_01977 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 1 398 63.561 T 13-10-2018 IPR011405 Pyrophosphate-dependent phosphofructokinase SMc01852 type GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 RPIT_05755 4eac962479f1132eba5b9ea47e56a23f 406 PIRSF PIRSF036484 1 402 7.1E-209 T 13-10-2018 IPR011405 Pyrophosphate-dependent phosphofructokinase SMc01852 type GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 RPIT_05755 4eac962479f1132eba5b9ea47e56a23f 406 Gene3D G3DSA:3.40.50.450 1 215 2.0E-42 T 13-10-2018 RPIT_12655 4f757f3ba28d058388e31351aa728e64 242 SUPERFAMILY SSF53795 74 180 1.01E-9 T 13-10-2018 RPIT_08300 13071cf6ba49cd7f0b76d4849ce45b26 286 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 196 285 1.8E-23 T 13-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 RPIT_08300 13071cf6ba49cd7f0b76d4849ce45b26 286 Pfam PF08029 HisG, C-terminal domain 211 281 9.8E-21 T 13-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 RPIT_08300 13071cf6ba49cd7f0b76d4849ce45b26 286 SUPERFAMILY SSF53850 6 211 4.26E-61 T 13-10-2018 RPIT_08300 13071cf6ba49cd7f0b76d4849ce45b26 286 Pfam PF01634 ATP phosphoribosyltransferase 54 206 1.6E-42 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 RPIT_08300 13071cf6ba49cd7f0b76d4849ce45b26 286 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 188 3.0E-52 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 RPIT_08300 13071cf6ba49cd7f0b76d4849ce45b26 286 Gene3D G3DSA:3.40.190.10 6 95 7.2E-25 T 13-10-2018 RPIT_08300 13071cf6ba49cd7f0b76d4849ce45b26 286 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 146 167 - T 13-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 RPIT_08300 13071cf6ba49cd7f0b76d4849ce45b26 286 Gene3D G3DSA:3.30.70.120 214 280 1.8E-18 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RPIT_08300 13071cf6ba49cd7f0b76d4849ce45b26 286 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 286 30.411 T 13-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 RPIT_08300 13071cf6ba49cd7f0b76d4849ce45b26 286 Gene3D G3DSA:3.40.190.10 96 181 4.1E-28 T 13-10-2018 RPIT_08300 13071cf6ba49cd7f0b76d4849ce45b26 286 SUPERFAMILY SSF54913 214 285 1.45E-17 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta RPIT_00330 9f719c0562d8333a39db7c81a416a721 228 Gene3D G3DSA:3.40.50.2300 1 128 9.5E-39 T 13-10-2018 RPIT_00330 9f719c0562d8333a39db7c81a416a721 228 Pfam PF00072 Response regulator receiver domain 3 112 1.3E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_00330 9f719c0562d8333a39db7c81a416a721 228 SMART SM00448 1 112 3.3E-43 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_00330 9f719c0562d8333a39db7c81a416a721 228 SMART SM00862 148 223 1.5E-24 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_00330 9f719c0562d8333a39db7c81a416a721 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 3.3E-25 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_00330 9f719c0562d8333a39db7c81a416a721 228 Gene3D G3DSA:1.10.10.10 129 227 4.5E-34 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_00330 9f719c0562d8333a39db7c81a416a721 228 SUPERFAMILY SSF52172 1 182 2.85E-43 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_10610 dd58962110bc93811523eca91635026b 328 Gene3D G3DSA:3.20.20.100 1 326 1.4E-82 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily RPIT_10610 dd58962110bc93811523eca91635026b 328 SUPERFAMILY SSF51430 1 319 1.11E-79 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily RPIT_10610 dd58962110bc93811523eca91635026b 328 PRINTS PR00069 Aldo-keto reductase signature 106 124 6.4E-5 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIT_10610 dd58962110bc93811523eca91635026b 328 PRINTS PR00069 Aldo-keto reductase signature 138 155 6.4E-5 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIT_10610 dd58962110bc93811523eca91635026b 328 PRINTS PR00069 Aldo-keto reductase signature 42 66 6.4E-5 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIT_10610 dd58962110bc93811523eca91635026b 328 Pfam PF00248 Aldo/keto reductase family 16 316 7.3E-61 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain RPIT_13500 ac873445eb13c278366b7d436704a460 386 Gene3D G3DSA:1.10.443.10 187 370 1.6E-30 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 RPIT_13500 ac873445eb13c278366b7d436704a460 386 Pfam PF00589 Phage integrase family 205 354 1.3E-17 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIT_13500 ac873445eb13c278366b7d436704a460 386 SUPERFAMILY SSF56349 75 355 6.36E-43 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIT_13500 ac873445eb13c278366b7d436704a460 386 Gene3D G3DSA:1.10.150.130 69 180 2.1E-18 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal RPIT_05775 39237646bc69e2836308f0eca236f39d 207 SUPERFAMILY SSF55821 1 203 1.5E-58 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily RPIT_05775 39237646bc69e2836308f0eca236f39d 207 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 7.3E-51 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 RPIT_05775 39237646bc69e2836308f0eca236f39d 207 Gene3D G3DSA:3.90.870.10 1 205 3.2E-57 T 13-10-2018 RPIT_05775 39237646bc69e2836308f0eca236f39d 207 Pfam PF01300 Telomere recombination 23 198 3.7E-41 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 RPIT_07665 54dd52bc2b2773125199788af6032a28 305 Pfam PF01545 Cation efflux family 22 211 2.2E-40 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIT_07665 54dd52bc2b2773125199788af6032a28 305 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 19 292 6.8E-78 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIT_07665 54dd52bc2b2773125199788af6032a28 305 SUPERFAMILY SSF161111 17 212 1.83E-49 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily RPIT_07665 54dd52bc2b2773125199788af6032a28 305 SUPERFAMILY SSF160240 215 292 1.57E-8 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 RPIT_07665 54dd52bc2b2773125199788af6032a28 305 Gene3D G3DSA:1.20.1510.10 18 211 4.1E-38 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily RPIT_08220 5f9a5762939c64060748fe4d31211167 343 SUPERFAMILY SSF55347 146 311 1.2E-48 T 13-10-2018 RPIT_08220 5f9a5762939c64060748fe4d31211167 343 SMART SM00859 4 136 3.3E-41 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RPIT_08220 5f9a5762939c64060748fe4d31211167 343 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 161 314 2.8E-21 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RPIT_08220 5f9a5762939c64060748fe4d31211167 343 Gene3D G3DSA:3.30.360.10 150 316 1.4E-117 T 13-10-2018 RPIT_08220 5f9a5762939c64060748fe4d31211167 343 SUPERFAMILY SSF51735 3 176 1.26E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_08220 5f9a5762939c64060748fe4d31211167 343 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 141 157 - T 13-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RPIT_08220 5f9a5762939c64060748fe4d31211167 343 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 129 2.3E-26 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RPIT_08220 5f9a5762939c64060748fe4d31211167 343 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 3 337 38.61 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RPIT_08220 5f9a5762939c64060748fe4d31211167 343 Gene3D G3DSA:3.40.50.720 5 329 1.4E-117 T 13-10-2018 RPIT_08220 5f9a5762939c64060748fe4d31211167 343 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 4 343 1.6E-115 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RPIT_04725 1a4dde8d394064742d5ab35b8d8ad800 427 Gene3D G3DSA:3.50.50.60 4 420 1.7E-70 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_04725 1a4dde8d394064742d5ab35b8d8ad800 427 Gene3D G3DSA:3.90.660.20 33 383 1.7E-70 T 13-10-2018 RPIT_04725 1a4dde8d394064742d5ab35b8d8ad800 427 Pfam PF01593 Flavin containing amine oxidoreductase 10 267 1.0E-24 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 RPIT_04725 1a4dde8d394064742d5ab35b8d8ad800 427 SUPERFAMILY SSF51905 1 300 2.52E-38 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_04725 1a4dde8d394064742d5ab35b8d8ad800 427 Gene3D G3DSA:1.10.3110.10 96 187 1.7E-70 T 13-10-2018 RPIT_07005 11ab5bb78605c312e4ec1b4f17ae707b 99 Gene3D G3DSA:3.40.50.880 1 33 7.3E-8 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_07005 11ab5bb78605c312e4ec1b4f17ae707b 99 Pfam PF17386 Lacto-N-biose phosphorylase C-terminal domain 36 70 1.1E-10 T 13-10-2018 IPR035356 Lacto-N-biose phosphorylase, C-terminal domain RPIT_07005 11ab5bb78605c312e4ec1b4f17ae707b 99 Pfam PF17385 Lacto-N-biose phosphorylase central domain 2 30 1.6E-6 T 13-10-2018 IPR035363 Lacto-N-biose phosphorylase, central domain RPIT_07005 11ab5bb78605c312e4ec1b4f17ae707b 99 Gene3D G3DSA:2.60.40.1180 35 98 4.9E-9 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta RPIT_14090 1f9e350add6621f6293438d5b9905f01 566 Pfam PF05683 Fumarase C-terminus 335 551 2.7E-91 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RPIT_14090 1f9e350add6621f6293438d5b9905f01 566 ProSitePatterns PS00163 Fumarate lyases signature. 470 479 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 RPIT_14090 1f9e350add6621f6293438d5b9905f01 566 Gene3D G3DSA:3.20.130.10 361 550 2.1E-57 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 RPIT_14090 1f9e350add6621f6293438d5b9905f01 566 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 388 551 2.2E-57 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RPIT_14090 1f9e350add6621f6293438d5b9905f01 566 Pfam PF05681 Fumarate hydratase (Fumerase) 50 327 1.2E-82 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RPIT_14090 1f9e350add6621f6293438d5b9905f01 566 PIRSF PIRSF001394 29 564 6.7E-214 T 13-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 RPIT_14090 1f9e350add6621f6293438d5b9905f01 566 SUPERFAMILY SSF117457 375 549 1.1E-61 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 RPIT_01980 3d08ab7874f385eabe4f8ac9c9c9e76e 281 Gene3D G3DSA:3.30.470.10 3 115 6.4E-28 T 13-10-2018 RPIT_01980 3d08ab7874f385eabe4f8ac9c9c9e76e 281 Gene3D G3DSA:3.20.10.10 118 278 6.1E-44 T 13-10-2018 RPIT_01980 3d08ab7874f385eabe4f8ac9c9c9e76e 281 Pfam PF01063 Amino-transferase class IV 33 257 4.1E-39 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 RPIT_01980 3d08ab7874f385eabe4f8ac9c9c9e76e 281 SUPERFAMILY SSF56752 6 276 1.27E-50 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 RPIT_01765 ec745e848c76638c83b1d649ffb387fc 327 Gene3D G3DSA:1.10.3720.10 68 322 1.4E-33 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_01765 ec745e848c76638c83b1d649ffb387fc 327 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 31 320 2.5E-84 T 13-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 RPIT_01765 ec745e848c76638c83b1d649ffb387fc 327 SUPERFAMILY SSF161098 66 312 6.41E-32 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_01765 ec745e848c76638c83b1d649ffb387fc 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 317 6.0E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_03120 6d496388530f61740ed194a56c39ba68 498 Gene3D G3DSA:3.50.50.60 1 207 3.2E-5 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_03120 6d496388530f61740ed194a56c39ba68 498 SUPERFAMILY SSF51905 1 204 2.59E-9 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_03120 6d496388530f61740ed194a56c39ba68 498 Pfam PF13454 FAD-NAD(P)-binding 4 151 1.3E-26 T 13-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain RPIT_10795 44dfeb3890aa3ffd3cbb0e290764348c 238 Gene3D G3DSA:2.60.40.3500 186 238 1.3E-5 T 13-10-2018 RPIT_05335 41ef4817d7479d9b380b83758e24bcf8 497 Pfam PF00672 HAMP domain 192 239 1.3E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 RPIT_05335 41ef4817d7479d9b380b83758e24bcf8 497 Pfam PF00512 His Kinase A (phospho-acceptor) domain 251 317 1.8E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIT_05335 41ef4817d7479d9b380b83758e24bcf8 497 SUPERFAMILY SSF55874 307 474 6.94E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_05335 41ef4817d7479d9b380b83758e24bcf8 497 SMART SM00304 190 242 6.3E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 RPIT_05335 41ef4817d7479d9b380b83758e24bcf8 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 452 1.1E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_05335 41ef4817d7479d9b380b83758e24bcf8 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 1.1E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_05335 41ef4817d7479d9b380b83758e24bcf8 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 471 1.1E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_05335 41ef4817d7479d9b380b83758e24bcf8 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 427 1.1E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_05335 41ef4817d7479d9b380b83758e24bcf8 497 SUPERFAMILY SSF47384 233 317 1.39E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 RPIT_05335 41ef4817d7479d9b380b83758e24bcf8 497 SMART SM00388 250 317 9.5E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIT_05335 41ef4817d7479d9b380b83758e24bcf8 497 Gene3D G3DSA:1.20.1480.50 157 244 9.2E-10 T 13-10-2018 RPIT_05335 41ef4817d7479d9b380b83758e24bcf8 497 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 472 8.8E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_05335 41ef4817d7479d9b380b83758e24bcf8 497 Gene3D G3DSA:3.30.565.10 322 473 2.4E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_05335 41ef4817d7479d9b380b83758e24bcf8 497 Gene3D G3DSA:1.10.287.130 245 320 3.9E-17 T 13-10-2018 RPIT_05335 41ef4817d7479d9b380b83758e24bcf8 497 SMART SM00387 363 474 3.9E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_05335 41ef4817d7479d9b380b83758e24bcf8 497 SUPERFAMILY SSF158472 192 239 2.88E-8 T 13-10-2018 RPIT_00500 7a9dbb2edd0c85f2c4606c21cda87cd1 289 Gene3D G3DSA:1.10.10.60 20 79 5.8E-9 T 13-10-2018 RPIT_00500 7a9dbb2edd0c85f2c4606c21cda87cd1 289 Gene3D G3DSA:1.10.10.60 85 123 4.8E-7 T 13-10-2018 RPIT_00500 7a9dbb2edd0c85f2c4606c21cda87cd1 289 Pfam PF12833 Helix-turn-helix domain 39 116 6.8E-15 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIT_00500 7a9dbb2edd0c85f2c4606c21cda87cd1 289 SMART SM00342 33 115 6.2E-14 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIT_00500 7a9dbb2edd0c85f2c4606c21cda87cd1 289 SUPERFAMILY SSF46689 70 123 2.55E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_10480 13b3087e9f904a856b4943bee5bcc4f5 316 Pfam PF01032 FecCD transport family 31 311 1.3E-48 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 RPIT_10480 13b3087e9f904a856b4943bee5bcc4f5 316 SUPERFAMILY SSF81345 26 311 9.42E-51 T 13-10-2018 IPR037294 ABC transporter, BtuC-like RPIT_10480 13b3087e9f904a856b4943bee5bcc4f5 316 Gene3D G3DSA:1.10.3470.10 7 315 8.2E-52 T 13-10-2018 IPR037294 ABC transporter, BtuC-like RPIT_11440 d286395933b87676bb1482a5f648d1ed 454 SUPERFAMILY SSF52777 213 450 1.96E-62 T 13-10-2018 RPIT_11440 d286395933b87676bb1482a5f648d1ed 454 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 RPIT_11440 d286395933b87676bb1482a5f648d1ed 454 SUPERFAMILY SSF47005 130 169 4.58E-6 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 RPIT_11440 d286395933b87676bb1482a5f648d1ed 454 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 225 449 1.4E-64 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 RPIT_11440 d286395933b87676bb1482a5f648d1ed 454 Gene3D G3DSA:4.10.320.10 130 178 1.3E-10 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 RPIT_11440 d286395933b87676bb1482a5f648d1ed 454 Pfam PF02817 e3 binding domain 132 165 2.0E-10 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 RPIT_11440 d286395933b87676bb1482a5f648d1ed 454 Pfam PF00364 Biotin-requiring enzyme 4 75 1.3E-19 T 13-10-2018 IPR000089 Biotin/lipoyl attachment RPIT_11440 d286395933b87676bb1482a5f648d1ed 454 SUPERFAMILY SSF51230 1 86 1.96E-24 T 13-10-2018 IPR011053 Single hybrid motif RPIT_11440 d286395933b87676bb1482a5f648d1ed 454 Gene3D G3DSA:3.30.559.10 205 452 5.6E-68 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 RPIT_11440 d286395933b87676bb1482a5f648d1ed 454 Gene3D G3DSA:2.40.50.100 1 91 6.5E-24 T 13-10-2018 RPIT_08775 a347d45be3e49068d3b4d5fb40845938 443 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 371 4.2E-9 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 RPIT_08775 a347d45be3e49068d3b4d5fb40845938 443 SUPERFAMILY SSF53244 303 439 4.21E-23 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RPIT_08775 a347d45be3e49068d3b4d5fb40845938 443 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 437 2.2E-107 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 RPIT_08775 a347d45be3e49068d3b4d5fb40845938 443 Gene3D G3DSA:3.90.190.20 303 442 1.6E-30 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RPIT_08775 a347d45be3e49068d3b4d5fb40845938 443 SUPERFAMILY SSF53623 7 298 5.72E-90 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 RPIT_08775 a347d45be3e49068d3b4d5fb40845938 443 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 46 69 - T 13-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 RPIT_08775 a347d45be3e49068d3b4d5fb40845938 443 PIRSF PIRSF001563 2 442 5.6E-112 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 RPIT_08775 a347d45be3e49068d3b4d5fb40845938 443 Gene3D G3DSA:3.40.1190.10 4 301 5.2E-98 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 RPIT_08775 a347d45be3e49068d3b4d5fb40845938 443 Pfam PF08245 Mur ligase middle domain 48 277 2.0E-12 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 RPIT_13235 61b709c62e4e2d986c6639f74eea2168 104 SUPERFAMILY SSF103481 6 100 1.7E-10 T 13-10-2018 RPIT_13235 61b709c62e4e2d986c6639f74eea2168 104 Pfam PF00893 Small Multidrug Resistance protein 1 91 7.3E-18 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 RPIT_13235 61b709c62e4e2d986c6639f74eea2168 104 Gene3D G3DSA:1.10.3730.20 1 104 1.0E-20 T 13-10-2018 RPIT_14280 a04669190bffdb3533faa3ec02a544c3 304 SUPERFAMILY SSF102588 5 299 1.7E-59 T 13-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 RPIT_14280 a04669190bffdb3533faa3ec02a544c3 304 Pfam PF02585 GlcNAc-PI de-N-acetylase 9 162 5.7E-24 T 13-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 RPIT_14280 a04669190bffdb3533faa3ec02a544c3 304 TIGRFAM TIGR03445 mycothiol_MshB: N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase 9 298 4.8E-72 T 13-10-2018 IPR017810 Mycothiol biosynthesis protein, MshB GO:0035595 RPIT_14280 a04669190bffdb3533faa3ec02a544c3 304 Gene3D G3DSA:3.40.50.10320 3 304 8.4E-84 T 13-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 RPIT_06850 c0dddd7a502bbdb58db6ac5e26fba7c7 319 Gene3D G3DSA:1.10.3720.10 86 308 1.2E-20 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_06850 c0dddd7a502bbdb58db6ac5e26fba7c7 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 314 2.4E-31 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_06850 c0dddd7a502bbdb58db6ac5e26fba7c7 319 SUPERFAMILY SSF161098 91 296 4.58E-17 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_00700 49c85a772fe3ab39dc4b48904b952890 221 SUPERFAMILY SSF56784 1 213 1.31E-55 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_00700 49c85a772fe3ab39dc4b48904b952890 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 92 180 3.8E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 RPIT_00700 49c85a772fe3ab39dc4b48904b952890 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 2.2E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 RPIT_00700 49c85a772fe3ab39dc4b48904b952890 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.2E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 RPIT_00700 49c85a772fe3ab39dc4b48904b952890 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 2.2E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 RPIT_00700 49c85a772fe3ab39dc4b48904b952890 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 2.2E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 RPIT_00700 49c85a772fe3ab39dc4b48904b952890 221 Gene3D G3DSA:1.10.150.240 18 83 9.0E-54 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RPIT_00700 49c85a772fe3ab39dc4b48904b952890 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 88 185 6.3E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 RPIT_00700 49c85a772fe3ab39dc4b48904b952890 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 185 2.3E-34 T 13-10-2018 RPIT_00700 49c85a772fe3ab39dc4b48904b952890 221 Gene3D G3DSA:3.40.50.1000 7 201 9.0E-54 T 13-10-2018 IPR023214 HAD superfamily RPIT_14665 2f7ab48cab60ae6fb48eb102b30977d3 283 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 8 266 4.7E-82 T 13-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 RPIT_14665 2f7ab48cab60ae6fb48eb102b30977d3 283 Pfam PF00809 Pterin binding enzyme 9 252 2.7E-69 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_14665 2f7ab48cab60ae6fb48eb102b30977d3 283 SUPERFAMILY SSF51717 3 269 2.22E-67 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_14665 2f7ab48cab60ae6fb48eb102b30977d3 283 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 42 55 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_14665 2f7ab48cab60ae6fb48eb102b30977d3 283 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 8 23 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_14665 2f7ab48cab60ae6fb48eb102b30977d3 283 Gene3D G3DSA:3.20.20.20 1 274 1.9E-68 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_06745 711bb7762790248c3539722e74e6fa4b 434 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 13-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 RPIT_06745 711bb7762790248c3539722e74e6fa4b 434 PIRSF PIRSF000098 2 433 3.2E-150 T 13-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 RPIT_06745 711bb7762790248c3539722e74e6fa4b 434 Pfam PF01842 ACT domain 350 417 2.2E-9 T 13-10-2018 IPR002912 ACT domain RPIT_06745 711bb7762790248c3539722e74e6fa4b 434 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 11 129 2.5E-16 T 13-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 RPIT_06745 711bb7762790248c3539722e74e6fa4b 434 Gene3D G3DSA:3.30.360.10 136 343 5.1E-137 T 13-10-2018 RPIT_06745 711bb7762790248c3539722e74e6fa4b 434 Gene3D G3DSA:3.40.50.720 5 340 5.1E-137 T 13-10-2018 RPIT_06745 711bb7762790248c3539722e74e6fa4b 434 SUPERFAMILY SSF55021 348 422 8.15E-8 T 13-10-2018 RPIT_06745 711bb7762790248c3539722e74e6fa4b 434 SUPERFAMILY SSF51735 1 158 4.11E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_06745 711bb7762790248c3539722e74e6fa4b 434 Gene3D G3DSA:3.30.70.260 344 422 5.1E-137 T 13-10-2018 RPIT_06745 711bb7762790248c3539722e74e6fa4b 434 SUPERFAMILY SSF55347 137 303 4.25E-52 T 13-10-2018 RPIT_06745 711bb7762790248c3539722e74e6fa4b 434 Pfam PF00742 Homoserine dehydrogenase 137 316 2.8E-65 T 13-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 RPIT_01400 ce87a70736ba6b8557013febbc0d4382 384 TIGRFAM TIGR03815 CpaE_hom_Actino: helicase/secretion neighborhood CpaE-like protein 60 371 1.6E-48 T 13-10-2018 IPR022521 Conserved hypothetical protein CHP03815, CpaE-like RPIT_01400 ce87a70736ba6b8557013febbc0d4382 384 Gene3D G3DSA:3.40.50.300 164 384 3.1E-14 T 13-10-2018 RPIT_01400 ce87a70736ba6b8557013febbc0d4382 384 SUPERFAMILY SSF52540 165 365 1.81E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_03425 4ce4ad05bda2ec1ba4d5b7e24549b4a9 281 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 245 7.1E-44 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIT_03425 4ce4ad05bda2ec1ba4d5b7e24549b4a9 281 PIRSF PIRSF001430 1 269 1.1E-67 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIT_03425 4ce4ad05bda2ec1ba4d5b7e24549b4a9 281 Gene3D G3DSA:3.30.70.580 1 112 1.2E-31 T 13-10-2018 RPIT_03425 4ce4ad05bda2ec1ba4d5b7e24549b4a9 281 SUPERFAMILY SSF55120 1 259 2.3E-64 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIT_03425 4ce4ad05bda2ec1ba4d5b7e24549b4a9 281 Pfam PF01416 tRNA pseudouridine synthase 152 253 1.6E-17 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIT_03425 4ce4ad05bda2ec1ba4d5b7e24549b4a9 281 Gene3D G3DSA:3.30.70.660 113 255 6.3E-32 T 13-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 RPIT_03425 4ce4ad05bda2ec1ba4d5b7e24549b4a9 281 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 252 29.233 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIT_09710 1edffd6b97028c9ec256dc15a2cf5c62 553 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 151 160 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09710 1edffd6b97028c9ec256dc15a2cf5c62 553 SUPERFAMILY SSF53738 46 221 5.49E-43 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09710 1edffd6b97028c9ec256dc15a2cf5c62 553 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 150 164 2.5E-5 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09710 1edffd6b97028c9ec256dc15a2cf5c62 553 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 298 313 2.5E-5 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09710 1edffd6b97028c9ec256dc15a2cf5c62 553 Gene3D G3DSA:3.40.120.10 330 438 6.6E-24 T 13-10-2018 RPIT_09710 1edffd6b97028c9ec256dc15a2cf5c62 553 SUPERFAMILY SSF55957 430 528 1.44E-10 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09710 1edffd6b97028c9ec256dc15a2cf5c62 553 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 216 314 3.3E-22 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09710 1edffd6b97028c9ec256dc15a2cf5c62 553 SUPERFAMILY SSF53738 213 314 2.0E-19 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09710 1edffd6b97028c9ec256dc15a2cf5c62 553 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 447 531 6.2E-7 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09710 1edffd6b97028c9ec256dc15a2cf5c62 553 SUPERFAMILY SSF53738 306 438 4.71E-28 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09710 1edffd6b97028c9ec256dc15a2cf5c62 553 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 326 434 5.5E-16 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09710 1edffd6b97028c9ec256dc15a2cf5c62 553 Gene3D G3DSA:3.40.120.10 212 329 9.5E-19 T 13-10-2018 RPIT_09710 1edffd6b97028c9ec256dc15a2cf5c62 553 Gene3D G3DSA:3.40.120.10 46 198 2.7E-46 T 13-10-2018 RPIT_09710 1edffd6b97028c9ec256dc15a2cf5c62 553 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 56 191 5.6E-41 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIT_09710 1edffd6b97028c9ec256dc15a2cf5c62 553 Gene3D G3DSA:3.30.310.50 448 535 5.7E-6 T 13-10-2018 RPIT_09970 6daeed6476d237dc564f69f81c715add 98 SMART SM00883 4 96 9.7E-56 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIT_09970 6daeed6476d237dc564f69f81c715add 98 Pfam PF00166 Chaperonin 10 Kd subunit 5 96 1.7E-35 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIT_09970 6daeed6476d237dc564f69f81c715add 98 Gene3D G3DSA:2.30.33.40 2 98 3.2E-39 T 13-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 RPIT_09970 6daeed6476d237dc564f69f81c715add 98 PRINTS PR00297 10kDa chaperonin signature 27 48 1.2E-28 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIT_09970 6daeed6476d237dc564f69f81c715add 98 PRINTS PR00297 10kDa chaperonin signature 83 96 1.2E-28 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIT_09970 6daeed6476d237dc564f69f81c715add 98 PRINTS PR00297 10kDa chaperonin signature 62 74 1.2E-28 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIT_09970 6daeed6476d237dc564f69f81c715add 98 PRINTS PR00297 10kDa chaperonin signature 5 20 1.2E-28 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIT_09970 6daeed6476d237dc564f69f81c715add 98 SUPERFAMILY SSF50129 3 97 4.0E-35 T 13-10-2018 IPR011032 GroES-like superfamily RPIT_09970 6daeed6476d237dc564f69f81c715add 98 Hamap MF_00580 10 kDa chaperonin [groS]. 4 97 25.193 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIT_09970 6daeed6476d237dc564f69f81c715add 98 ProSitePatterns PS00681 Chaperonins cpn10 signature. 5 29 - T 13-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 RPIT_03170 ab0dbbebce05a8acc2a312a6cf05b808 127 SUPERFAMILY SSF53137 14 125 2.4E-46 T 13-10-2018 RPIT_03170 ab0dbbebce05a8acc2a312a6cf05b808 127 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 13 127 27.752 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03170 ab0dbbebce05a8acc2a312a6cf05b808 127 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 14 127 1.7E-47 T 13-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03170 ab0dbbebce05a8acc2a312a6cf05b808 127 Gene3D G3DSA:3.30.420.100 13 127 5.2E-40 T 13-10-2018 RPIT_03170 ab0dbbebce05a8acc2a312a6cf05b808 127 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 15 127 4.2E-40 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_02600 3b931da98f5358531c89c530dec1239a 215 Gene3D G3DSA:3.40.50.1820 1 214 4.5E-33 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_02600 3b931da98f5358531c89c530dec1239a 215 Pfam PF12697 Alpha/beta hydrolase family 9 209 3.2E-15 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_02600 3b931da98f5358531c89c530dec1239a 215 SUPERFAMILY SSF53474 3 213 1.22E-32 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_09845 474134ade09f22d0676ba019bd2fd120 517 Pfam PF02142 MGS-like domain 20 133 9.5E-22 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain RPIT_09845 474134ade09f22d0676ba019bd2fd120 517 SMART SM00851 19 133 2.7E-50 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain RPIT_09845 474134ade09f22d0676ba019bd2fd120 517 Gene3D G3DSA:3.40.140.20 388 517 1.4E-51 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RPIT_09845 474134ade09f22d0676ba019bd2fd120 517 Gene3D G3DSA:3.40.140.20 210 362 6.9E-58 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RPIT_09845 474134ade09f22d0676ba019bd2fd120 517 PIRSF PIRSF000414 2 517 5.6E-194 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RPIT_09845 474134ade09f22d0676ba019bd2fd120 517 SUPERFAMILY SSF52335 7 195 2.01E-63 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily RPIT_09845 474134ade09f22d0676ba019bd2fd120 517 SMART SM00798 138 452 1.0E-170 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RPIT_09845 474134ade09f22d0676ba019bd2fd120 517 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 517 40.849 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RPIT_09845 474134ade09f22d0676ba019bd2fd120 517 Gene3D G3DSA:3.40.50.1380 1 201 9.3E-81 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily RPIT_09845 474134ade09f22d0676ba019bd2fd120 517 Pfam PF01808 AICARFT/IMPCHase bienzyme 138 451 5.2E-109 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RPIT_09845 474134ade09f22d0676ba019bd2fd120 517 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 517 1.2E-166 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RPIT_09845 474134ade09f22d0676ba019bd2fd120 517 SUPERFAMILY SSF53927 213 517 9.03E-113 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 RPIT_02915 b9bee4ad42a67b8ed671af375655d0df 1172 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 35 1133 12.326 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02915 b9bee4ad42a67b8ed671af375655d0df 1172 ProSitePatterns PS01166 RNA polymerases beta chain signature. 876 888 - T 13-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02915 b9bee4ad42a67b8ed671af375655d0df 1172 Gene3D G3DSA:3.90.1800.10 1042 1096 5.4E-10 T 13-10-2018 RPIT_02915 b9bee4ad42a67b8ed671af375655d0df 1172 Gene3D G3DSA:2.40.50.100 638 712 0.0 T 13-10-2018 RPIT_02915 b9bee4ad42a67b8ed671af375655d0df 1172 Gene3D G3DSA:2.30.150.10 513 580 0.0 T 13-10-2018 RPIT_02915 b9bee4ad42a67b8ed671af375655d0df 1172 Pfam PF10385 RNA polymerase beta subunit external 1 domain 510 576 4.2E-23 T 13-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02915 b9bee4ad42a67b8ed671af375655d0df 1172 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 248 850 2.8E-303 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02915 b9bee4ad42a67b8ed671af375655d0df 1172 SUPERFAMILY SSF64484 34 1142 0.0 T 13-10-2018 RPIT_02915 b9bee4ad42a67b8ed671af375655d0df 1172 Gene3D G3DSA:2.40.50.150 748 874 0.0 T 13-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02915 b9bee4ad42a67b8ed671af375655d0df 1172 Pfam PF04561 RNA polymerase Rpb2, domain 2 182 373 9.7E-30 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02915 b9bee4ad42a67b8ed671af375655d0df 1172 Pfam PF04563 RNA polymerase beta subunit 49 419 5.9E-24 T 13-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02915 b9bee4ad42a67b8ed671af375655d0df 1172 Pfam PF04560 RNA polymerase Rpb2, domain 7 1057 1131 6.2E-26 T 13-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02915 b9bee4ad42a67b8ed671af375655d0df 1172 Pfam PF00562 RNA polymerase Rpb2, domain 6 638 1055 2.6E-154 T 13-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02915 b9bee4ad42a67b8ed671af375655d0df 1172 Pfam PF04565 RNA polymerase Rpb2, domain 3 432 500 1.1E-28 T 13-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02915 b9bee4ad42a67b8ed671af375655d0df 1172 Gene3D G3DSA:3.90.1100.10 40 637 0.0 T 13-10-2018 RPIT_02915 b9bee4ad42a67b8ed671af375655d0df 1172 Gene3D G3DSA:2.40.270.10 38 1033 0.0 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_02915 b9bee4ad42a67b8ed671af375655d0df 1172 Gene3D G3DSA:3.90.1110.10 187 367 0.0 T 13-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIT_01610 37775a0a63e0b56ce2221ba47676a6de 108 Gene3D G3DSA:3.30.60.230 1 61 1.0E-20 T 13-10-2018 RPIT_01610 37775a0a63e0b56ce2221ba47676a6de 108 Gene3D G3DSA:1.20.890.50 75 108 2.1E-15 T 13-10-2018 RPIT_01610 37775a0a63e0b56ce2221ba47676a6de 108 ProDom PD026347 LSR2-LIKE LSR2 ANTIGEN IMMUNE PRECURSOR RESPONSE SIGNAL PLASMID LYSYL GP61 1 108 5.0E-20 T 13-10-2018 IPR024412 Lsr2 RPIT_01610 37775a0a63e0b56ce2221ba47676a6de 108 Pfam PF11774 Lsr2 1 107 1.9E-36 T 13-10-2018 IPR024412 Lsr2 RPIT_10050 b5a1665a84fc8d6b22f45cfe839dfb30 304 Gene3D G3DSA:3.40.50.300 150 292 6.5E-34 T 13-10-2018 RPIT_10050 b5a1665a84fc8d6b22f45cfe839dfb30 304 SUPERFAMILY SSF52540 167 270 1.05E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10050 b5a1665a84fc8d6b22f45cfe839dfb30 304 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 157 288 1.9E-25 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RPIT_10050 b5a1665a84fc8d6b22f45cfe839dfb30 304 SUPERFAMILY SSF55729 2 141 1.51E-20 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_10050 b5a1665a84fc8d6b22f45cfe839dfb30 304 Gene3D G3DSA:3.40.630.30 1 138 1.6E-17 T 13-10-2018 RPIT_10050 b5a1665a84fc8d6b22f45cfe839dfb30 304 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 156 277 1.2E-30 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RPIT_11380 8b9f368660b35cfac12dcafabe9817c5 330 Pfam PF05448 Acetyl xylan esterase (AXE1) 1 325 1.6E-101 T 13-10-2018 IPR008391 Acetyl xylan esterase RPIT_11380 8b9f368660b35cfac12dcafabe9817c5 330 SUPERFAMILY SSF53474 2 327 1.87E-33 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_11380 8b9f368660b35cfac12dcafabe9817c5 330 Gene3D G3DSA:3.40.50.1820 1 329 1.7E-82 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_12390 8de0cd8db4af249e8ba8813d30d5fecc 226 SUPERFAMILY SSF51366 6 222 2.04E-51 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 RPIT_12390 8de0cd8db4af249e8ba8813d30d5fecc 226 Gene3D G3DSA:3.20.20.70 1 224 1.5E-82 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_12390 8de0cd8db4af249e8ba8813d30d5fecc 226 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 30 224 1.2E-54 T 13-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 RPIT_12390 8de0cd8db4af249e8ba8813d30d5fecc 226 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 6 224 35.054 T 13-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 RPIT_11780 953c03a52edc35bd8753fe2efbbebe2f 406 SUPERFAMILY SSF50952 68 395 9.29E-38 T 13-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RPIT_11780 953c03a52edc35bd8753fe2efbbebe2f 406 Gene3D G3DSA:2.120.10.30 63 406 2.0E-94 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like RPIT_11780 953c03a52edc35bd8753fe2efbbebe2f 406 Pfam PF07995 Glucose / Sorbosone dehydrogenase 78 401 1.9E-115 T 13-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase RPIT_03000 834c62f43c463bfc13ee7ec1ae218c63 488 PRINTS PR00987 Glutamyl-tRNA synthetase signature 24 35 5.7E-18 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 RPIT_03000 834c62f43c463bfc13ee7ec1ae218c63 488 PRINTS PR00987 Glutamyl-tRNA synthetase signature 39 52 5.7E-18 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 RPIT_03000 834c62f43c463bfc13ee7ec1ae218c63 488 PRINTS PR00987 Glutamyl-tRNA synthetase signature 211 219 5.7E-18 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 RPIT_03000 834c62f43c463bfc13ee7ec1ae218c63 488 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 205 5.7E-18 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 RPIT_03000 834c62f43c463bfc13ee7ec1ae218c63 488 PRINTS PR00987 Glutamyl-tRNA synthetase signature 10 22 5.7E-18 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 RPIT_03000 834c62f43c463bfc13ee7ec1ae218c63 488 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 8 482 6.6E-132 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 RPIT_03000 834c62f43c463bfc13ee7ec1ae218c63 488 Gene3D G3DSA:3.40.50.620 2 332 3.1E-127 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_03000 834c62f43c463bfc13ee7ec1ae218c63 488 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 8 323 2.9E-90 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 RPIT_03000 834c62f43c463bfc13ee7ec1ae218c63 488 Gene3D G3DSA:1.10.10.350 390 487 2.7E-24 T 13-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 RPIT_03000 834c62f43c463bfc13ee7ec1ae218c63 488 SUPERFAMILY SSF48163 317 482 6.8E-37 T 13-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 RPIT_03000 834c62f43c463bfc13ee7ec1ae218c63 488 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 13 24 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_03000 834c62f43c463bfc13ee7ec1ae218c63 488 SUPERFAMILY SSF52374 7 312 7.24E-97 T 13-10-2018 RPIT_03000 834c62f43c463bfc13ee7ec1ae218c63 488 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 6 484 30.291 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 RPIT_05815 40a2e792edba8dc7ae3b7f9910219330 110 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 82 106 7.5E-9 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 RPIT_05815 40a2e792edba8dc7ae3b7f9910219330 110 SUPERFAMILY SSF57716 81 109 2.71E-5 T 13-10-2018 RPIT_05815 40a2e792edba8dc7ae3b7f9910219330 110 Gene3D G3DSA:1.20.120.910 1 110 1.8E-20 T 13-10-2018 RPIT_02275 1975346c1b56bee48fac8d6015a1868c 323 SUPERFAMILY SSF47823 13 112 4.9E-28 T 13-10-2018 RPIT_02275 1975346c1b56bee48fac8d6015a1868c 323 Gene3D G3DSA:1.10.443.10 114 311 2.1E-41 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 RPIT_02275 1975346c1b56bee48fac8d6015a1868c 323 Pfam PF00589 Phage integrase family 146 310 2.4E-11 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIT_02275 1975346c1b56bee48fac8d6015a1868c 323 Gene3D G3DSA:1.10.150.130 10 110 5.3E-26 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal RPIT_02275 1975346c1b56bee48fac8d6015a1868c 323 SUPERFAMILY SSF56349 139 321 2.68E-38 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIT_02775 9f163a824ee13d1ba0cebd0b688b5e5c 250 Pfam PF01925 Sulfite exporter TauE/SafE 9 244 7.2E-35 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIT_04635 263d96aa333d8c636b6be300a7cac92f 1082 Gene3D G3DSA:3.20.20.220 62 440 5.1E-97 T 13-10-2018 RPIT_04635 263d96aa333d8c636b6be300a7cac92f 1082 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 694 701 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 RPIT_04635 263d96aa333d8c636b6be300a7cac92f 1082 Gene3D G3DSA:3.40.605.10 492 912 3.6E-103 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 RPIT_04635 263d96aa333d8c636b6be300a7cac92f 1082 Pfam PF00171 Aldehyde dehydrogenase family 496 913 1.9E-96 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 RPIT_04635 263d96aa333d8c636b6be300a7cac92f 1082 SUPERFAMILY SSF51730 119 432 1.69E-73 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like RPIT_04635 263d96aa333d8c636b6be300a7cac92f 1082 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 722 733 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 RPIT_04635 263d96aa333d8c636b6be300a7cac92f 1082 SUPERFAMILY SSF53720 493 914 1.7E-96 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 RPIT_04635 263d96aa333d8c636b6be300a7cac92f 1082 Pfam PF01619 Proline dehydrogenase 119 408 4.1E-61 T 13-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 RPIT_04635 263d96aa333d8c636b6be300a7cac92f 1082 Gene3D G3DSA:3.40.309.10 698 887 3.6E-103 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 RPIT_04635 263d96aa333d8c636b6be300a7cac92f 1082 PIRSF PIRSF000197 80 1080 7.6E-235 T 13-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 RPIT_03315 6966a98617ae8e81cbecdc1e51ef2c31 311 Pfam PF01261 Xylose isomerase-like TIM barrel 43 258 6.9E-26 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain RPIT_03315 6966a98617ae8e81cbecdc1e51ef2c31 311 SUPERFAMILY SSF51658 14 306 2.07E-48 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily RPIT_03315 6966a98617ae8e81cbecdc1e51ef2c31 311 Gene3D G3DSA:3.20.20.150 12 305 2.6E-61 T 13-10-2018 RPIT_08785 a513efbb5af458dae63ae3516ac7516f 853 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 23 614 9.9E-92 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_08785 a513efbb5af458dae63ae3516ac7516f 853 PRINTS PR00986 Valyl-tRNA synthetase signature 382 395 3.4E-19 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RPIT_08785 a513efbb5af458dae63ae3516ac7516f 853 PRINTS PR00986 Valyl-tRNA synthetase signature 533 551 3.4E-19 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RPIT_08785 a513efbb5af458dae63ae3516ac7516f 853 PRINTS PR00986 Valyl-tRNA synthetase signature 502 523 3.4E-19 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RPIT_08785 a513efbb5af458dae63ae3516ac7516f 853 PRINTS PR00986 Valyl-tRNA synthetase signature 256 273 3.4E-19 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RPIT_08785 a513efbb5af458dae63ae3516ac7516f 853 PRINTS PR00986 Valyl-tRNA synthetase signature 45 56 3.4E-19 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RPIT_08785 a513efbb5af458dae63ae3516ac7516f 853 SUPERFAMILY SSF47323 633 840 6.35E-36 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_08785 a513efbb5af458dae63ae3516ac7516f 853 Hamap MF_02005 Valine--tRNA ligase [valS]. 10 834 27.082 T 13-10-2018 IPR022874 Valine-tRNA ligase, type 2 GO:0004832 KEGG: 00970+6.1.1.9 RPIT_08785 a513efbb5af458dae63ae3516ac7516f 853 Gene3D G3DSA:3.90.740.10 202 378 1.2E-188 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RPIT_08785 a513efbb5af458dae63ae3516ac7516f 853 SUPERFAMILY SSF50677 219 367 1.57E-31 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RPIT_08785 a513efbb5af458dae63ae3516ac7516f 853 Gene3D G3DSA:3.40.50.620 30 582 1.2E-188 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_08785 a513efbb5af458dae63ae3516ac7516f 853 Gene3D G3DSA:1.10.730.10 19 788 1.2E-188 T 13-10-2018 RPIT_08785 a513efbb5af458dae63ae3516ac7516f 853 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 52 63 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_08785 a513efbb5af458dae63ae3516ac7516f 853 Pfam PF08264 Anticodon-binding domain of tRNA 659 801 2.7E-27 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 RPIT_08785 a513efbb5af458dae63ae3516ac7516f 853 SUPERFAMILY SSF52374 18 624 2.5E-103 T 13-10-2018 RPIT_01670 5d4abbdc8a34c69a150a502764f7d61a 295 Gene3D G3DSA:3.20.20.530 29 266 1.7E-49 T 13-10-2018 RPIT_01670 5d4abbdc8a34c69a150a502764f7d61a 295 SUPERFAMILY SSF51730 30 274 1.29E-28 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like RPIT_04200 248f8e49618041d39f53977a80e942e3 315 Pfam PF01933 Uncharacterised protein family UPF0052 9 271 9.7E-68 T 13-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 RPIT_04200 248f8e49618041d39f53977a80e942e3 315 Hamap MF_00973 Gluconeogenesis factor. 5 315 30.859 T 13-10-2018 IPR010119 Gluconeogenesis factor RPIT_04200 248f8e49618041d39f53977a80e942e3 315 Gene3D G3DSA:3.40.50.12300 3 315 4.5E-91 T 13-10-2018 IPR038136 Gluconeogenesis factor superfamily RPIT_04200 248f8e49618041d39f53977a80e942e3 315 SUPERFAMILY SSF142338 7 309 2.49E-81 T 13-10-2018 RPIT_04200 248f8e49618041d39f53977a80e942e3 315 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 313 8.9E-82 T 13-10-2018 IPR010119 Gluconeogenesis factor RPIT_13870 3835f540c9ca086b04afe09a4c860fd3 307 SUPERFAMILY SSF52518 1 164 1.02E-43 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_13870 3835f540c9ca086b04afe09a4c860fd3 307 Pfam PF02779 Transketolase, pyrimidine binding domain 5 158 5.3E-26 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RPIT_13870 3835f540c9ca086b04afe09a4c860fd3 307 Pfam PF02780 Transketolase, C-terminal domain 174 297 3.3E-20 T 13-10-2018 IPR033248 Transketolase, C-terminal domain RPIT_13870 3835f540c9ca086b04afe09a4c860fd3 307 Gene3D G3DSA:3.40.50.920 174 306 5.2E-30 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 RPIT_13870 3835f540c9ca086b04afe09a4c860fd3 307 SUPERFAMILY SSF52922 170 306 5.5E-27 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 RPIT_13870 3835f540c9ca086b04afe09a4c860fd3 307 SMART SM00861 1 163 1.5E-33 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RPIT_13870 3835f540c9ca086b04afe09a4c860fd3 307 Gene3D G3DSA:3.40.50.970 1 170 2.6E-50 T 13-10-2018 RPIT_02710 4fea5f024afe9d6a69e3f9a2f2086a3d 356 PIRSF PIRSF035875 14 319 2.4E-73 T 13-10-2018 IPR017039 Virulence factor BrkB RPIT_02710 4fea5f024afe9d6a69e3f9a2f2086a3d 356 Pfam PF03631 Virulence factor BrkB 39 297 3.1E-62 T 13-10-2018 IPR017039 Virulence factor BrkB RPIT_02710 4fea5f024afe9d6a69e3f9a2f2086a3d 356 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 32 295 1.2E-32 T 13-10-2018 IPR017039 Virulence factor BrkB RPIT_02985 4077f597dd87ce1867736c9a4740ced7 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 397 2.8E-206 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RPIT_02985 4077f597dd87ce1867736c9a4740ced7 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 147 1.7E-13 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RPIT_02985 4077f597dd87ce1867736c9a4740ced7 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 56.736 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RPIT_02985 4077f597dd87ce1867736c9a4740ced7 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site RPIT_02985 4077f597dd87ce1867736c9a4740ced7 397 Gene3D G3DSA:3.40.50.300 1 205 9.2E-64 T 13-10-2018 RPIT_02985 4077f597dd87ce1867736c9a4740ced7 397 Gene3D G3DSA:2.40.30.10 341 396 4.5E-28 T 13-10-2018 RPIT_02985 4077f597dd87ce1867736c9a4740ced7 397 SUPERFAMILY SSF52540 4 216 1.62E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_02985 4077f597dd87ce1867736c9a4740ced7 397 SUPERFAMILY SSF50465 305 397 2.01E-34 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RPIT_02985 4077f597dd87ce1867736c9a4740ced7 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 9.6E-56 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_02985 4077f597dd87ce1867736c9a4740ced7 397 SUPERFAMILY SSF50447 207 304 1.92E-29 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily RPIT_02985 4077f597dd87ce1867736c9a4740ced7 397 Pfam PF03143 Elongation factor Tu C-terminal domain 302 395 5.2E-32 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RPIT_02985 4077f597dd87ce1867736c9a4740ced7 397 Gene3D G3DSA:2.40.30.10 208 337 5.4E-52 T 13-10-2018 RPIT_02985 4077f597dd87ce1867736c9a4740ced7 397 Pfam PF03144 Elongation factor Tu domain 2 227 296 1.9E-16 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RPIT_02985 4077f597dd87ce1867736c9a4740ced7 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_02985 4077f597dd87ce1867736c9a4740ced7 397 PRINTS PR00315 GTP-binding elongation factor signature 60 68 1.5E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_02985 4077f597dd87ce1867736c9a4740ced7 397 PRINTS PR00315 GTP-binding elongation factor signature 96 107 1.5E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_02985 4077f597dd87ce1867736c9a4740ced7 397 PRINTS PR00315 GTP-binding elongation factor signature 133 142 1.5E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_02985 4077f597dd87ce1867736c9a4740ced7 397 PRINTS PR00315 GTP-binding elongation factor signature 80 90 1.5E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_08875 e450c747b61f5f3c4b7619b7448665c7 370 Pfam PF00480 ROK family 75 357 4.5E-28 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RPIT_08875 e450c747b61f5f3c4b7619b7448665c7 370 Gene3D G3DSA:3.30.420.40 189 337 7.5E-43 T 13-10-2018 RPIT_08875 e450c747b61f5f3c4b7619b7448665c7 370 SUPERFAMILY SSF53067 74 363 1.36E-33 T 13-10-2018 RPIT_08875 e450c747b61f5f3c4b7619b7448665c7 370 Gene3D G3DSA:3.30.420.40 79 188 7.5E-43 T 13-10-2018 RPIT_08875 e450c747b61f5f3c4b7619b7448665c7 370 SUPERFAMILY SSF46785 3 67 1.87E-8 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_08875 e450c747b61f5f3c4b7619b7448665c7 370 Gene3D G3DSA:1.10.10.10 12 68 2.6E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_12855 b85cf53eb257940fbea6234dbcf2c101 333 Pfam PF00294 pfkB family carbohydrate kinase 4 312 1.0E-14 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB RPIT_12855 b85cf53eb257940fbea6234dbcf2c101 333 Gene3D G3DSA:3.40.1190.20 1 326 2.0E-38 T 13-10-2018 IPR029056 Ribokinase-like RPIT_12855 b85cf53eb257940fbea6234dbcf2c101 333 SUPERFAMILY SSF53613 1 312 6.24E-32 T 13-10-2018 IPR029056 Ribokinase-like RPIT_13670 9b8ab10bcdabb7e53c2dcf953ae0f6bd 872 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 19 826 0.0 T 13-10-2018 RPIT_13670 9b8ab10bcdabb7e53c2dcf953ae0f6bd 872 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 42 486 7.6E-141 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RPIT_13670 9b8ab10bcdabb7e53c2dcf953ae0f6bd 872 Gene3D G3DSA:3.30.1360.40 250 347 1.2E-188 T 13-10-2018 RPIT_13670 9b8ab10bcdabb7e53c2dcf953ae0f6bd 872 Gene3D G3DSA:3.90.199.10 42 501 1.2E-188 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 RPIT_13670 9b8ab10bcdabb7e53c2dcf953ae0f6bd 872 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 518 564 1.1E-14 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIT_13670 9b8ab10bcdabb7e53c2dcf953ae0f6bd 872 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 624 669 5.1E-7 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIT_13670 9b8ab10bcdabb7e53c2dcf953ae0f6bd 872 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 732 777 2.1E-13 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIT_13670 9b8ab10bcdabb7e53c2dcf953ae0f6bd 872 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 568 616 2.2E-7 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIT_13670 9b8ab10bcdabb7e53c2dcf953ae0f6bd 872 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 673 721 4.1E-13 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIT_13670 9b8ab10bcdabb7e53c2dcf953ae0f6bd 872 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 790 821 0.021 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIT_13670 9b8ab10bcdabb7e53c2dcf953ae0f6bd 872 Gene3D G3DSA:2.120.10.90 515 827 1.5E-109 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal RPIT_13670 9b8ab10bcdabb7e53c2dcf953ae0f6bd 872 SUPERFAMILY SSF56719 40 502 8.63E-160 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RPIT_13670 9b8ab10bcdabb7e53c2dcf953ae0f6bd 872 Gene3D G3DSA:1.10.268.10 384 472 1.2E-188 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RPIT_13670 9b8ab10bcdabb7e53c2dcf953ae0f6bd 872 SMART SM00434 21 479 1.2E-243 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RPIT_13670 9b8ab10bcdabb7e53c2dcf953ae0f6bd 872 SUPERFAMILY SSF101904 513 832 1.11E-92 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal RPIT_08210 f162e3fd44fb31f0f3c2bce8ee269f0d 300 Pfam PF00696 Amino acid kinase family 34 273 3.4E-48 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 RPIT_08210 f162e3fd44fb31f0f3c2bce8ee269f0d 300 Gene3D G3DSA:3.40.1160.10 12 300 4.2E-104 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily RPIT_08210 f162e3fd44fb31f0f3c2bce8ee269f0d 300 TIGRFAM TIGR00761 argB: acetylglutamate kinase 34 271 4.8E-78 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RPIT_08210 f162e3fd44fb31f0f3c2bce8ee269f0d 300 SUPERFAMILY SSF53633 13 298 2.09E-88 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily RPIT_08210 f162e3fd44fb31f0f3c2bce8ee269f0d 300 PIRSF PIRSF000728 18 297 1.1E-102 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RPIT_08210 f162e3fd44fb31f0f3c2bce8ee269f0d 300 Hamap MF_00082 Acetylglutamate kinase [argB]. 32 290 47.971 T 13-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RPIT_08210 f162e3fd44fb31f0f3c2bce8ee269f0d 300 PRINTS PR00474 Glutamate 5-kinase family signature 247 267 1.9E-7 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 RPIT_08210 f162e3fd44fb31f0f3c2bce8ee269f0d 300 PRINTS PR00474 Glutamate 5-kinase family signature 64 78 1.9E-7 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 RPIT_08210 f162e3fd44fb31f0f3c2bce8ee269f0d 300 PRINTS PR00474 Glutamate 5-kinase family signature 196 223 1.9E-7 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 RPIT_08960 d6a53ac655d7c5dcf9939f8d870de6f9 1496 SMART SM00490 295 405 1.8E-14 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_08960 d6a53ac655d7c5dcf9939f8d870de6f9 1496 SUPERFAMILY SSF52540 34 419 3.52E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_08960 d6a53ac655d7c5dcf9939f8d870de6f9 1496 Gene3D G3DSA:3.40.50.300 6 221 1.2E-55 T 13-10-2018 RPIT_08960 d6a53ac655d7c5dcf9939f8d870de6f9 1496 Pfam PF00270 DEAD/DEAH box helicase 24 204 9.8E-27 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIT_08960 d6a53ac655d7c5dcf9939f8d870de6f9 1496 Pfam PF08494 DEAD/H associated 664 852 2.5E-65 T 13-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 RPIT_08960 d6a53ac655d7c5dcf9939f8d870de6f9 1496 Pfam PF00271 Helicase conserved C-terminal domain 278 405 2.4E-13 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_08960 d6a53ac655d7c5dcf9939f8d870de6f9 1496 SMART SM00487 19 243 1.4E-35 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIT_08960 d6a53ac655d7c5dcf9939f8d870de6f9 1496 Gene3D G3DSA:3.40.50.300 261 423 8.3E-24 T 13-10-2018 RPIT_09105 e1faeeeacd3c6d5ea1303ba641433c05 211 Gene3D G3DSA:3.60.130.10 23 211 2.6E-32 T 13-10-2018 RPIT_09105 e1faeeeacd3c6d5ea1303ba641433c05 211 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 10 207 4.1E-17 T 13-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 RPIT_09105 e1faeeeacd3c6d5ea1303ba641433c05 211 SUPERFAMILY SSF51197 18 210 6.41E-32 T 13-10-2018 RPIT_12590 d13cd31073b05b86ad7ed4c404645800 623 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 365 390 - T 13-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 RPIT_12590 d13cd31073b05b86ad7ed4c404645800 623 Gene3D G3DSA:3.40.50.280 488 623 9.0E-39 T 13-10-2018 RPIT_12590 d13cd31073b05b86ad7ed4c404645800 623 Gene3D G3DSA:3.20.20.240 53 486 4.1E-156 T 13-10-2018 RPIT_12590 d13cd31073b05b86ad7ed4c404645800 623 Gene3D G3DSA:1.10.196.20 10 52 1.9E-12 T 13-10-2018 IPR024067 Methylmalonyl-CoA mutase small subunit, N-terminal KEGG: 00280+5.4.99.2|KEGG: 00630+5.4.99.2|KEGG: 00640+5.4.99.2|KEGG: 00720+5.4.99.2|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854 RPIT_12590 d13cd31073b05b86ad7ed4c404645800 623 TIGRFAM TIGR00642 mmCoA_mut_beta: methylmalonyl-CoA mutase, small subunit 12 623 8.1E-197 T 13-10-2018 IPR004608 Methylmalonyl-CoA mutase, beta chain GO:0004494|GO:0019652|GO:0031419 KEGG: 00280+5.4.99.2|KEGG: 00630+5.4.99.2|KEGG: 00640+5.4.99.2|KEGG: 00720+5.4.99.2|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854 RPIT_12590 d13cd31073b05b86ad7ed4c404645800 623 Pfam PF01642 Methylmalonyl-CoA mutase 55 510 1.1E-110 T 13-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 RPIT_12590 d13cd31073b05b86ad7ed4c404645800 623 SUPERFAMILY SSF51703 12 527 2.71E-129 T 13-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 RPIT_11565 86287916b908bb694fac007b86e67722 211 Pfam PF00588 SpoU rRNA Methylase family 61 197 1.2E-24 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RPIT_11565 86287916b908bb694fac007b86e67722 211 SUPERFAMILY SSF75217 40 204 2.42E-39 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases RPIT_11565 86287916b908bb694fac007b86e67722 211 Gene3D G3DSA:3.40.1280.10 38 211 1.7E-33 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIT_06405 438e3c3ceea20c44f2b22bbaaffee8b3 383 Gene3D G3DSA:2.40.50.940 244 377 9.6E-13 T 13-10-2018 RPIT_06405 438e3c3ceea20c44f2b22bbaaffee8b3 383 SMART SM00382 50 233 3.6E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_06405 438e3c3ceea20c44f2b22bbaaffee8b3 383 Pfam PF08402 TOBE domain 300 379 1.2E-11 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 RPIT_06405 438e3c3ceea20c44f2b22bbaaffee8b3 383 Gene3D G3DSA:3.40.50.300 21 243 2.7E-67 T 13-10-2018 RPIT_06405 438e3c3ceea20c44f2b22bbaaffee8b3 383 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_06405 438e3c3ceea20c44f2b22bbaaffee8b3 383 SUPERFAMILY SSF52540 22 266 5.32E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06405 438e3c3ceea20c44f2b22bbaaffee8b3 383 SUPERFAMILY SSF50331 259 380 6.8E-12 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal RPIT_06405 438e3c3ceea20c44f2b22bbaaffee8b3 383 Gene3D G3DSA:2.40.50.140 307 371 9.6E-13 T 13-10-2018 RPIT_06405 438e3c3ceea20c44f2b22bbaaffee8b3 383 Pfam PF00005 ABC transporter 42 183 1.9E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_06405 438e3c3ceea20c44f2b22bbaaffee8b3 383 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 56 359 2.6E-109 T 13-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 RPIT_14770 2752fb4d4f766d5facea713feb673b0c 245 Gene3D G3DSA:2.40.50.100 47 114 1.7E-6 T 13-10-2018 RPIT_14770 2752fb4d4f766d5facea713feb673b0c 245 SUPERFAMILY SSF51230 41 78 3.53E-5 T 13-10-2018 IPR011053 Single hybrid motif RPIT_14770 2752fb4d4f766d5facea713feb673b0c 245 Pfam PF13533 Biotin-lipoyl like 46 87 2.3E-7 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain RPIT_02385 c6b7a97fb9885875f66dc3e1f777ad6a 346 Gene3D G3DSA:3.90.650.10 170 343 7.0E-57 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily RPIT_02385 c6b7a97fb9885875f66dc3e1f777ad6a 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 4 345 40.443 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RPIT_02385 c6b7a97fb9885875f66dc3e1f777ad6a 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 176 336 4.9E-29 T 13-10-2018 IPR010918 PurM-like, C-terminal domain RPIT_02385 c6b7a97fb9885875f66dc3e1f777ad6a 346 SUPERFAMILY SSF55326 5 168 3.84E-43 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily RPIT_02385 c6b7a97fb9885875f66dc3e1f777ad6a 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 5 335 2.7E-121 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RPIT_02385 c6b7a97fb9885875f66dc3e1f777ad6a 346 SUPERFAMILY SSF56042 171 336 2.09E-52 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily RPIT_02385 c6b7a97fb9885875f66dc3e1f777ad6a 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 163 3.3E-14 T 13-10-2018 IPR016188 PurM-like, N-terminal domain RPIT_02385 c6b7a97fb9885875f66dc3e1f777ad6a 346 Gene3D G3DSA:3.30.1330.10 3 169 1.3E-58 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily RPIT_12925 f2eca5c6a6380c1269421d76e4c4273f 357 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 12 224 2.1E-71 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RPIT_12925 f2eca5c6a6380c1269421d76e4c4273f 357 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 13 340 1.0E-101 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RPIT_12925 f2eca5c6a6380c1269421d76e4c4273f 357 PIRSF PIRSF000267 8 354 4.4E-117 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RPIT_01580 03a1ee6e78052a36ee7e8e2d8c12e443 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 115 7.7E-33 T 13-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RPIT_01580 03a1ee6e78052a36ee7e8e2d8c12e443 119 Gene3D G3DSA:3.30.1130.10 1 117 1.4E-39 T 13-10-2018 RPIT_01580 03a1ee6e78052a36ee7e8e2d8c12e443 119 SMART SM00905 5 115 5.6E-44 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RPIT_01580 03a1ee6e78052a36ee7e8e2d8c12e443 119 SUPERFAMILY SSF55620 3 117 4.67E-32 T 13-10-2018 RPIT_01580 03a1ee6e78052a36ee7e8e2d8c12e443 119 TIGRFAM TIGR00526 folB_dom: FolB domain 3 117 2.7E-29 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RPIT_01580 03a1ee6e78052a36ee7e8e2d8c12e443 119 Pfam PF02152 Dihydroneopterin aldolase 5 113 1.5E-32 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RPIT_10510 92d4dc8556d40af3135b67ae3c3d4e11 324 Gene3D G3DSA:3.40.1010.20 104 200 2.4E-109 T 13-10-2018 RPIT_10510 92d4dc8556d40af3135b67ae3c3d4e11 324 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 8 292 37.372 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 RPIT_10510 92d4dc8556d40af3135b67ae3c3d4e11 324 Gene3D G3DSA:3.40.50.11270 19 103 2.4E-109 T 13-10-2018 RPIT_10510 92d4dc8556d40af3135b67ae3c3d4e11 324 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 10 289 2.1E-95 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 RPIT_10510 92d4dc8556d40af3135b67ae3c3d4e11 324 Pfam PF02401 LytB protein 10 288 1.9E-90 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 RPIT_10510 92d4dc8556d40af3135b67ae3c3d4e11 324 Gene3D G3DSA:3.40.1010.20 14 288 2.4E-109 T 13-10-2018 RPIT_08915 f779c07d2e192624a635de197f19df52 148 PIRSF PIRSF005384 1 148 6.2E-49 T 13-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RPIT_08915 f779c07d2e192624a635de197f19df52 148 Gene3D G3DSA:3.40.1400.10 1 148 2.9E-56 T 13-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RPIT_08915 f779c07d2e192624a635de197f19df52 148 TIGRFAM TIGR02133 RPI_actino: ribose 5-phosphate isomerase 1 147 6.0E-62 T 13-10-2018 IPR011860 Ribose 5-phosphate isomerase GO:0004751 RPIT_08915 f779c07d2e192624a635de197f19df52 148 SUPERFAMILY SSF89623 1 147 4.05E-51 T 13-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RPIT_08915 f779c07d2e192624a635de197f19df52 148 Pfam PF02502 Ribose/Galactose Isomerase 3 140 7.2E-46 T 13-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RPIT_08915 f779c07d2e192624a635de197f19df52 148 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 146 4.9E-51 T 13-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RPIT_05085 b424096553381f21e32047b75ebd3fa3 383 Pfam PF01207 Dihydrouridine synthase (Dus) 25 329 5.7E-95 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIT_05085 b424096553381f21e32047b75ebd3fa3 383 Gene3D G3DSA:1.10.1200.80 269 336 7.8E-8 T 13-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 RPIT_05085 b424096553381f21e32047b75ebd3fa3 383 SUPERFAMILY SSF51395 23 330 6.96E-80 T 13-10-2018 RPIT_05085 b424096553381f21e32047b75ebd3fa3 383 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 23 333 3.0E-109 T 13-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 RPIT_05085 b424096553381f21e32047b75ebd3fa3 383 Gene3D G3DSA:3.20.20.70 19 263 4.5E-77 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_05085 b424096553381f21e32047b75ebd3fa3 383 PIRSF PIRSF006621 14 343 3.2E-100 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIT_10725 6a09714afd3c96ace53cb4531af42f6a 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 186 32.071 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RPIT_10725 6a09714afd3c96ace53cb4531af42f6a 194 Pfam PF01195 Peptidyl-tRNA hydrolase 7 193 1.0E-52 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RPIT_10725 6a09714afd3c96ace53cb4531af42f6a 194 SUPERFAMILY SSF53178 5 193 1.23E-60 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 RPIT_10725 6a09714afd3c96ace53cb4531af42f6a 194 Gene3D G3DSA:3.40.50.1470 1 194 7.9E-62 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 RPIT_10725 6a09714afd3c96ace53cb4531af42f6a 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 7 194 1.1E-52 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RPIT_10725 6a09714afd3c96ace53cb4531af42f6a 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 115 125 - T 13-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RPIT_08340 2e747724a18c592b44961319a181aa14 124 Gene3D G3DSA:2.40.350.10 2 124 2.7E-31 T 13-10-2018 IPR023159 SO1590-like superfamily RPIT_08340 2e747724a18c592b44961319a181aa14 124 Pfam PF11528 Protein of unknown function (DUF3224) 18 122 3.4E-28 T 13-10-2018 IPR021607 Protein of unknown function DUF3224 RPIT_08340 2e747724a18c592b44961319a181aa14 124 SUPERFAMILY SSF159238 3 122 4.05E-28 T 13-10-2018 IPR023159 SO1590-like superfamily RPIT_02800 dd19d496d603aefc265498ecf8cc9476 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 24 43 - T 13-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_02800 dd19d496d603aefc265498ecf8cc9476 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 4.6E-24 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_02800 dd19d496d603aefc265498ecf8cc9476 56 SUPERFAMILY SSF57829 4 56 1.77E-20 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 RPIT_02800 dd19d496d603aefc265498ecf8cc9476 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 8 56 20.448 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_02800 dd19d496d603aefc265498ecf8cc9476 56 Pfam PF00471 Ribosomal protein L33 11 56 1.8E-24 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_02800 dd19d496d603aefc265498ecf8cc9476 56 Gene3D G3DSA:2.20.28.120 4 56 1.4E-25 T 13-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_13305 ae849a9b92afd203b12a318bdae9ee8f 329 Gene3D G3DSA:3.40.50.2300 166 291 5.9E-53 T 13-10-2018 RPIT_13305 ae849a9b92afd203b12a318bdae9ee8f 329 SMART SM00354 2 72 1.8E-15 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_13305 ae849a9b92afd203b12a318bdae9ee8f 329 Gene3D G3DSA:1.10.260.40 1 55 4.5E-16 T 13-10-2018 RPIT_13305 ae849a9b92afd203b12a318bdae9ee8f 329 Pfam PF13377 Periplasmic binding protein-like domain 176 328 4.7E-27 T 13-10-2018 RPIT_13305 ae849a9b92afd203b12a318bdae9ee8f 329 SUPERFAMILY SSF47413 2 60 2.41E-13 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_13305 ae849a9b92afd203b12a318bdae9ee8f 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 2.8E-10 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_13305 ae849a9b92afd203b12a318bdae9ee8f 329 Gene3D G3DSA:3.40.50.2300 56 306 5.9E-53 T 13-10-2018 RPIT_13305 ae849a9b92afd203b12a318bdae9ee8f 329 SUPERFAMILY SSF53822 75 328 6.28E-46 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_04160 b23772a72c7569b2b18c971cb6e9b078 228 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 20 217 5.1E-20 T 13-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type RPIT_04160 b23772a72c7569b2b18c971cb6e9b078 228 Gene3D G3DSA:1.20.120.450 3 154 4.5E-29 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes RPIT_04160 b23772a72c7569b2b18c971cb6e9b078 228 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 28 149 8.2E-15 T 13-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 RPIT_04160 b23772a72c7569b2b18c971cb6e9b078 228 SUPERFAMILY SSF109854 6 150 5.95E-20 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes RPIT_06315 9ac727fa96c5aee4718a2ec74c16a0dc 138 PRINTS PR01853 Bacterial YajC preprotein translocase signature 22 40 1.9E-11 T 13-10-2018 IPR003849 Preprotein translocase YajC RPIT_06315 9ac727fa96c5aee4718a2ec74c16a0dc 138 PRINTS PR01853 Bacterial YajC preprotein translocase signature 2 22 1.9E-11 T 13-10-2018 IPR003849 Preprotein translocase YajC RPIT_06315 9ac727fa96c5aee4718a2ec74c16a0dc 138 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 2 81 2.3E-23 T 13-10-2018 IPR003849 Preprotein translocase YajC RPIT_06315 9ac727fa96c5aee4718a2ec74c16a0dc 138 SMART SM01323 1 82 2.2E-31 T 13-10-2018 IPR003849 Preprotein translocase YajC RPIT_06315 9ac727fa96c5aee4718a2ec74c16a0dc 138 Pfam PF02699 Preprotein translocase subunit 4 80 9.7E-25 T 13-10-2018 IPR003849 Preprotein translocase YajC RPIT_03775 02532c4e427d50dc8ed10fefce6128c5 264 Pfam PF12146 Serine aminopeptidase, S33 27 233 6.9E-12 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 RPIT_03775 02532c4e427d50dc8ed10fefce6128c5 264 PIRSF PIRSF017388 10 255 3.2E-50 T 13-10-2018 IPR012354 Esterase/lipase GO:0052689 RPIT_03775 02532c4e427d50dc8ed10fefce6128c5 264 Gene3D G3DSA:3.40.50.1820 10 253 5.0E-48 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_03775 02532c4e427d50dc8ed10fefce6128c5 264 SUPERFAMILY SSF53474 22 253 2.14E-31 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_09960 ed1b2fdab2d9b0fc072615f112f20c96 1189 Gene3D G3DSA:2.130.10.10 746 971 4.1E-10 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 RPIT_09960 ed1b2fdab2d9b0fc072615f112f20c96 1189 SMART SM00320 783 820 280.0 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 RPIT_09960 ed1b2fdab2d9b0fc072615f112f20c96 1189 SMART SM00320 1077 1110 4.4 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 RPIT_09960 ed1b2fdab2d9b0fc072615f112f20c96 1189 SMART SM00320 573 610 10.0 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 RPIT_09960 ed1b2fdab2d9b0fc072615f112f20c96 1189 SMART SM00320 696 738 220.0 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 RPIT_09960 ed1b2fdab2d9b0fc072615f112f20c96 1189 SMART SM00320 1025 1065 420.0 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 RPIT_09960 ed1b2fdab2d9b0fc072615f112f20c96 1189 SMART SM00320 822 858 1.7 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 RPIT_09960 ed1b2fdab2d9b0fc072615f112f20c96 1189 SMART SM00320 614 654 23.0 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 RPIT_09960 ed1b2fdab2d9b0fc072615f112f20c96 1189 SMART SM00320 984 1022 160.0 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 RPIT_09960 ed1b2fdab2d9b0fc072615f112f20c96 1189 SUPERFAMILY SSF52540 96 314 2.33E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_09960 ed1b2fdab2d9b0fc072615f112f20c96 1189 Gene3D G3DSA:1.10.260.40 4 62 1.7E-5 T 13-10-2018 RPIT_09960 ed1b2fdab2d9b0fc072615f112f20c96 1189 SMART SM00530 13 64 0.0037 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_09960 ed1b2fdab2d9b0fc072615f112f20c96 1189 Pfam PF13560 Helix-turn-helix domain 10 61 6.9E-7 T 13-10-2018 RPIT_09960 ed1b2fdab2d9b0fc072615f112f20c96 1189 Gene3D G3DSA:2.130.10.10 992 1176 8.9E-17 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 RPIT_09960 ed1b2fdab2d9b0fc072615f112f20c96 1189 SUPERFAMILY SSF50998 674 1114 4.71E-30 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RPIT_09960 ed1b2fdab2d9b0fc072615f112f20c96 1189 SUPERFAMILY SSF47413 9 55 9.5E-7 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_09960 ed1b2fdab2d9b0fc072615f112f20c96 1189 Gene3D G3DSA:2.130.10.10 569 742 1.6E-11 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 RPIT_09960 ed1b2fdab2d9b0fc072615f112f20c96 1189 SUPERFAMILY SSF50960 592 699 5.89E-9 T 13-10-2018 RPIT_04090 e17aecfcd4d6596aa22bce50fac39a37 192 SMART SM01012 132 187 1.1E-24 T 13-10-2018 IPR005561 ANTAR domain GO:0003723 RPIT_04090 e17aecfcd4d6596aa22bce50fac39a37 192 Gene3D G3DSA:1.10.10.10 134 192 1.4E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_04090 e17aecfcd4d6596aa22bce50fac39a37 192 Pfam PF03861 ANTAR domain 136 187 1.0E-20 T 13-10-2018 IPR005561 ANTAR domain GO:0003723 RPIT_04090 e17aecfcd4d6596aa22bce50fac39a37 192 Pfam PF00072 Response regulator receiver domain 7 116 1.6E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_04090 e17aecfcd4d6596aa22bce50fac39a37 192 Gene3D G3DSA:3.40.50.2300 1 133 2.9E-36 T 13-10-2018 RPIT_04090 e17aecfcd4d6596aa22bce50fac39a37 192 SMART SM00448 5 116 2.3E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_04090 e17aecfcd4d6596aa22bce50fac39a37 192 PIRSF PIRSF036382 1 192 1.3E-70 T 13-10-2018 IPR008327 Signal transduction response regulator, antiterminator RPIT_04090 e17aecfcd4d6596aa22bce50fac39a37 192 SUPERFAMILY SSF52172 4 187 1.99E-55 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_08490 fd14d2b5508ca4382f5bc00f847d8652 404 PIRSF PIRSF001413 5 401 1.1E-157 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RPIT_08490 fd14d2b5508ca4382f5bc00f847d8652 404 Gene3D G3DSA:3.40.50.1100 58 389 1.2E-170 T 13-10-2018 RPIT_08490 fd14d2b5508ca4382f5bc00f847d8652 404 SUPERFAMILY SSF53686 8 394 1.01E-133 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIT_08490 fd14d2b5508ca4382f5bc00f847d8652 404 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 57 383 3.0E-48 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme RPIT_08490 fd14d2b5508ca4382f5bc00f847d8652 404 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 85 99 - T 13-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RPIT_08490 fd14d2b5508ca4382f5bc00f847d8652 404 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 11 395 4.8E-170 T 13-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RPIT_08490 fd14d2b5508ca4382f5bc00f847d8652 404 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 6 396 48.634 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RPIT_08490 fd14d2b5508ca4382f5bc00f847d8652 404 Gene3D G3DSA:3.40.50.1100 14 210 1.2E-170 T 13-10-2018 RPIT_01390 8456f2634ae7ed69224e0977d0f18a9a 164 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 11 129 5.0E-19 T 13-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III RPIT_03575 288715efd68047e041400ee85268995b 244 Pfam PF04474 Protein of unknown function (DUF554) 5 237 9.2E-66 T 13-10-2018 IPR007563 Protein of unknown function DUF554 RPIT_13160 bc3d06b9ee7182b50cb4940c0d17dca4 886 Pfam PF03176 MMPL family 478 697 1.2E-30 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 RPIT_13160 bc3d06b9ee7182b50cb4940c0d17dca4 886 Pfam PF03176 MMPL family 46 366 2.2E-65 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 RPIT_13160 bc3d06b9ee7182b50cb4940c0d17dca4 886 Gene3D G3DSA:1.20.1640.10 172 350 3.6E-7 T 13-10-2018 RPIT_13160 bc3d06b9ee7182b50cb4940c0d17dca4 886 SUPERFAMILY SSF82866 121 338 1.44E-29 T 13-10-2018 RPIT_13160 bc3d06b9ee7182b50cb4940c0d17dca4 886 SUPERFAMILY SSF82866 462 697 9.42E-31 T 13-10-2018 RPIT_05040 fe10e47df322247760daab88e080c9b4 849 SMART SM00487 26 210 2.9E-17 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIT_05040 fe10e47df322247760daab88e080c9b4 849 Pfam PF12029 Domain of unknown function (DUF3516) 373 843 8.8E-194 T 13-10-2018 IPR021904 Protein of unknown function DUF3516 RPIT_05040 fe10e47df322247760daab88e080c9b4 849 SMART SM00490 276 362 2.9E-14 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_05040 fe10e47df322247760daab88e080c9b4 849 Pfam PF00271 Helicase conserved C-terminal domain 285 362 9.7E-6 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_05040 fe10e47df322247760daab88e080c9b4 849 Pfam PF00270 DEAD/DEAH box helicase 32 179 9.7E-9 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIT_05040 fe10e47df322247760daab88e080c9b4 849 SUPERFAMILY SSF52540 42 375 7.72E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_05040 fe10e47df322247760daab88e080c9b4 849 Gene3D G3DSA:3.40.50.300 11 202 1.9E-36 T 13-10-2018 RPIT_05040 fe10e47df322247760daab88e080c9b4 849 Gene3D G3DSA:3.40.50.300 208 383 7.4E-41 T 13-10-2018 RPIT_05690 0087f9b452ecd9e471b8671e4be85317 663 SUPERFAMILY SSF55681 242 545 1.79E-84 T 13-10-2018 RPIT_05690 0087f9b452ecd9e471b8671e4be85317 663 Pfam PF03129 Anticodon binding domain 560 647 2.3E-15 T 13-10-2018 IPR004154 Anticodon-binding RPIT_05690 0087f9b452ecd9e471b8671e4be85317 663 SUPERFAMILY SSF55186 47 240 1.44E-46 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 RPIT_05690 0087f9b452ecd9e471b8671e4be85317 663 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 170 218 4.0E-10 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 RPIT_05690 0087f9b452ecd9e471b8671e4be85317 663 Gene3D G3DSA:3.40.50.800 552 660 2.8E-23 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily RPIT_05690 0087f9b452ecd9e471b8671e4be85317 663 Gene3D G3DSA:3.30.980.10 53 221 7.0E-49 T 13-10-2018 RPIT_05690 0087f9b452ecd9e471b8671e4be85317 663 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 338 548 4.2E-34 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_05690 0087f9b452ecd9e471b8671e4be85317 663 SMART SM00863 162 218 1.1E-14 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 RPIT_05690 0087f9b452ecd9e471b8671e4be85317 663 Gene3D G3DSA:3.30.54.20 113 185 7.0E-49 T 13-10-2018 RPIT_05690 0087f9b452ecd9e471b8671e4be85317 663 Gene3D G3DSA:3.30.930.10 224 551 2.9E-110 T 13-10-2018 RPIT_05690 0087f9b452ecd9e471b8671e4be85317 663 PRINTS PR01047 Threonyl-tRNA synthetase signature 375 398 1.3E-46 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIT_05690 0087f9b452ecd9e471b8671e4be85317 663 PRINTS PR01047 Threonyl-tRNA synthetase signature 483 511 1.3E-46 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIT_05690 0087f9b452ecd9e471b8671e4be85317 663 PRINTS PR01047 Threonyl-tRNA synthetase signature 526 539 1.3E-46 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIT_05690 0087f9b452ecd9e471b8671e4be85317 663 PRINTS PR01047 Threonyl-tRNA synthetase signature 553 565 1.3E-46 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIT_05690 0087f9b452ecd9e471b8671e4be85317 663 PRINTS PR01047 Threonyl-tRNA synthetase signature 342 370 1.3E-46 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIT_05690 0087f9b452ecd9e471b8671e4be85317 663 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 56 647 2.5E-176 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIT_05690 0087f9b452ecd9e471b8671e4be85317 663 SUPERFAMILY SSF52954 548 656 3.93E-27 T 13-10-2018 RPIT_05690 0087f9b452ecd9e471b8671e4be85317 663 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 50 653 31.227 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIT_06425 274929e8e3dab767dfc9d899812d4d9e 158 Pfam PF02630 SCO1/SenC 4 128 4.5E-24 T 13-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_06425 274929e8e3dab767dfc9d899812d4d9e 158 Gene3D G3DSA:3.40.30.10 1 158 3.1E-40 T 13-10-2018 RPIT_06425 274929e8e3dab767dfc9d899812d4d9e 158 SUPERFAMILY SSF52833 2 147 7.3E-33 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_03970 cfcac75d6d08942642a8044cbe8021b4 199 Pfam PF01882 Protein of unknown function DUF58 1 69 5.2E-13 T 13-10-2018 IPR002881 Domain of unknown function DUF58 RPIT_13395 a3c883ffbe1dd2ec3a7b4a78ae3a7dbb 742 SUPERFAMILY SSF82866 520 727 1.02E-23 T 13-10-2018 RPIT_13395 a3c883ffbe1dd2ec3a7b4a78ae3a7dbb 742 SUPERFAMILY SSF82866 145 364 7.59E-27 T 13-10-2018 RPIT_13395 a3c883ffbe1dd2ec3a7b4a78ae3a7dbb 742 Pfam PF03176 MMPL family 159 366 2.4E-35 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 RPIT_13395 a3c883ffbe1dd2ec3a7b4a78ae3a7dbb 742 Pfam PF03176 MMPL family 463 738 9.0E-42 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 RPIT_13395 a3c883ffbe1dd2ec3a7b4a78ae3a7dbb 742 Gene3D G3DSA:1.20.1640.10 189 361 2.6E-8 T 13-10-2018 RPIT_03920 ff25c6ae5bc6953aec8e5abc52c1b8a4 440 SUPERFAMILY SSF53756 25 392 3.86E-61 T 13-10-2018 RPIT_03920 ff25c6ae5bc6953aec8e5abc52c1b8a4 440 Pfam PF13439 Glycosyltransferase Family 4 88 204 2.4E-8 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RPIT_03920 ff25c6ae5bc6953aec8e5abc52c1b8a4 440 Pfam PF00534 Glycosyl transferases group 1 220 376 1.3E-30 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 RPIT_03920 ff25c6ae5bc6953aec8e5abc52c1b8a4 440 Gene3D G3DSA:3.40.50.2000 201 384 5.7E-57 T 13-10-2018 RPIT_03920 ff25c6ae5bc6953aec8e5abc52c1b8a4 440 Gene3D G3DSA:3.40.50.2000 106 200 5.7E-57 T 13-10-2018 RPIT_14510 dbf387ab16fe565e15a08a095173f514 79 ProSitePatterns PS00057 Ribosomal protein S18 signature. 25 48 - T 13-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_14510 dbf387ab16fe565e15a08a095173f514 79 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 25 74 3.0E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_14510 dbf387ab16fe565e15a08a095173f514 79 PRINTS PR00974 Ribosomal protein S18 family signature 32 42 2.4E-17 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_14510 dbf387ab16fe565e15a08a095173f514 79 PRINTS PR00974 Ribosomal protein S18 family signature 42 49 2.4E-17 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_14510 dbf387ab16fe565e15a08a095173f514 79 PRINTS PR00974 Ribosomal protein S18 family signature 50 64 2.4E-17 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_14510 dbf387ab16fe565e15a08a095173f514 79 PRINTS PR00974 Ribosomal protein S18 family signature 64 74 2.4E-17 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_14510 dbf387ab16fe565e15a08a095173f514 79 Gene3D G3DSA:4.10.640.10 2 79 3.6E-25 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_14510 dbf387ab16fe565e15a08a095173f514 79 SUPERFAMILY SSF46911 4 75 5.32E-24 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_14510 dbf387ab16fe565e15a08a095173f514 79 Pfam PF01084 Ribosomal protein S18 23 72 3.9E-22 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_14510 dbf387ab16fe565e15a08a095173f514 79 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 6 77 19.491 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_14510 dbf387ab16fe565e15a08a095173f514 79 TIGRFAM TIGR00165 S18: ribosomal protein bS18 10 75 1.2E-24 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_07685 adb04de8353220301a98e4e8ce11fad3 238 Gene3D G3DSA:3.40.50.300 88 215 1.1E-10 T 13-10-2018 RPIT_07685 adb04de8353220301a98e4e8ce11fad3 238 SUPERFAMILY SSF52540 42 211 4.18E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_07685 adb04de8353220301a98e4e8ce11fad3 238 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 43 110 3.1E-6 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RPIT_07685 adb04de8353220301a98e4e8ce11fad3 238 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 152 195 8.7E-8 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RPIT_07685 adb04de8353220301a98e4e8ce11fad3 238 Gene3D G3DSA:3.40.50.300 35 84 5.2E-6 T 13-10-2018 RPIT_07685 adb04de8353220301a98e4e8ce11fad3 238 SMART SM00382 41 210 6.3E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_08865 8b481a2ee19c835fce5179e3dc5e1882 428 Gene3D G3DSA:3.40.190.10 149 385 1.1E-86 T 13-10-2018 RPIT_08865 8b481a2ee19c835fce5179e3dc5e1882 428 SUPERFAMILY SSF53850 25 420 4.13E-53 T 13-10-2018 RPIT_08865 8b481a2ee19c835fce5179e3dc5e1882 428 Gene3D G3DSA:3.40.190.10 50 367 1.1E-86 T 13-10-2018 RPIT_08865 8b481a2ee19c835fce5179e3dc5e1882 428 Pfam PF13416 Bacterial extracellular solute-binding protein 54 364 2.2E-36 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein RPIT_01270 ab0a31388f510d5e92b6e6adff7df875 89 Pfam PF00381 PTS HPr component phosphorylation site 3 83 7.1E-29 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_01270 ab0a31388f510d5e92b6e6adff7df875 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RPIT_01270 ab0a31388f510d5e92b6e6adff7df875 89 Gene3D G3DSA:3.30.1340.10 2 83 2.8E-28 T 13-10-2018 IPR035895 HPr-like superfamily RPIT_01270 ab0a31388f510d5e92b6e6adff7df875 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.7E-14 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_01270 ab0a31388f510d5e92b6e6adff7df875 89 PRINTS PR00107 Phosphocarrier protein signature 39 54 3.7E-14 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_01270 ab0a31388f510d5e92b6e6adff7df875 89 PRINTS PR00107 Phosphocarrier protein signature 54 71 3.7E-14 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_01270 ab0a31388f510d5e92b6e6adff7df875 89 SUPERFAMILY SSF55594 1 83 1.96E-24 T 13-10-2018 IPR035895 HPr-like superfamily RPIT_01270 ab0a31388f510d5e92b6e6adff7df875 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 5.8E-27 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_06890 5b50c2cf7153465b0703206c307ded1b 435 SUPERFAMILY SSF63411 15 210 5.13E-27 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RPIT_06890 5b50c2cf7153465b0703206c307ded1b 435 Pfam PF00675 Insulinase (Peptidase family M16) 51 146 3.4E-6 T 13-10-2018 IPR011765 Peptidase M16, N-terminal RPIT_06890 5b50c2cf7153465b0703206c307ded1b 435 Pfam PF05193 Peptidase M16 inactive domain 182 348 5.4E-12 T 13-10-2018 IPR007863 Peptidase M16, C-terminal RPIT_06890 5b50c2cf7153465b0703206c307ded1b 435 SUPERFAMILY SSF63411 233 417 1.03E-27 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RPIT_06890 5b50c2cf7153465b0703206c307ded1b 435 Gene3D G3DSA:3.30.830.10 21 215 2.3E-26 T 13-10-2018 RPIT_06890 5b50c2cf7153465b0703206c307ded1b 435 Gene3D G3DSA:3.30.830.10 228 419 2.4E-33 T 13-10-2018 RPIT_06730 0f4ba3e86c0392e5e904af19940eae8a 68 SUPERFAMILY SSF143800 1 66 9.81E-26 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_06730 0f4ba3e86c0392e5e904af19940eae8a 68 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_06730 0f4ba3e86c0392e5e904af19940eae8a 68 Gene3D G3DSA:2.30.170.50 1 68 1.8E-30 T 13-10-2018 RPIT_06730 0f4ba3e86c0392e5e904af19940eae8a 68 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 3.1E-35 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_06730 0f4ba3e86c0392e5e904af19940eae8a 68 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.1E-21 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_06730 0f4ba3e86c0392e5e904af19940eae8a 68 PRINTS PR01249 Ribosomal protein L31 signature 47 65 3.1E-21 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_06730 0f4ba3e86c0392e5e904af19940eae8a 68 PRINTS PR01249 Ribosomal protein L31 signature 32 47 3.1E-21 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_06730 0f4ba3e86c0392e5e904af19940eae8a 68 Pfam PF01197 Ribosomal protein L31 1 66 3.4E-32 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_06730 0f4ba3e86c0392e5e904af19940eae8a 68 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 29.023 T 13-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 Gene3D G3DSA:1.25.10.110 114 181 4.4E-5 T 13-10-2018 RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 SMART SM00567 E-Z type HEAT repeats 160 188 73.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 SMART SM00567 E-Z type HEAT repeats 220 249 2.1E-4 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 SMART SM00567 E-Z type HEAT repeats 189 218 2.1 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 SMART SM00567 E-Z type HEAT repeats 280 309 6.7E-8 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 SMART SM00567 E-Z type HEAT repeats 251 278 83.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 SMART SM00567 E-Z type HEAT repeats 311 340 26.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 Pfam PF13411 MerR HTH family regulatory protein 5 71 1.6E-19 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 29 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 Gene3D G3DSA:1.10.1660.10 1 113 8.1E-30 T 13-10-2018 RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 SMART SM00422 4 73 7.3E-31 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 Gene3D G3DSA:1.25.10.10 182 355 1.3E-33 T 13-10-2018 IPR011989 Armadillo-like helical RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 Pfam PF13646 HEAT repeats 269 343 3.0E-13 T 13-10-2018 RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 Pfam PF13646 HEAT repeats 184 262 1.0E-11 T 13-10-2018 RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 SUPERFAMILY SSF46955 4 108 1.54E-29 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 5.9E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 5.9E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 5.9E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_01650 59a2b4eebf555904c5c69fabc1de0a54 358 SUPERFAMILY SSF48371 183 339 1.51E-24 T 13-10-2018 IPR016024 Armadillo-type fold RPIT_03710 307b3b6d6741fb33cdd8b08ed058570c 354 Gene3D G3DSA:2.102.10.10 189 343 1.7E-35 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 RPIT_03710 307b3b6d6741fb33cdd8b08ed058570c 354 SUPERFAMILY SSF50022 208 346 1.83E-25 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 RPIT_03710 307b3b6d6741fb33cdd8b08ed058570c 354 Pfam PF00355 Rieske [2Fe-2S] domain 247 316 2.7E-9 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIT_10250 f014ba08b0e9350678a0002dc2455648 372 PIRSF PIRSF015658 3 370 2.1E-157 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 RPIT_10250 f014ba08b0e9350678a0002dc2455648 372 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 19 368 7.6E-153 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 RPIT_10250 f014ba08b0e9350678a0002dc2455648 372 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 364 1.2E-139 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 RPIT_03725 3fd1d693843b35d1ca53c9f74d832365 323 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 47 284 9.8E-70 T 13-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related RPIT_06725 a7cdd50b12138338776314a79fc6aa1c 355 SMART SM00937 63 176 2.9E-47 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 RPIT_06725 a7cdd50b12138338776314a79fc6aa1c 355 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 354 35.876 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RPIT_06725 a7cdd50b12138338776314a79fc6aa1c 355 Pfam PF03462 PCRF domain 10 201 1.8E-59 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 RPIT_06725 a7cdd50b12138338776314a79fc6aa1c 355 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 351 4.6E-137 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RPIT_06725 a7cdd50b12138338776314a79fc6aa1c 355 Pfam PF00472 RF-1 domain 211 318 5.7E-40 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RPIT_06725 a7cdd50b12138338776314a79fc6aa1c 355 Gene3D G3DSA:3.30.70.1660 105 339 4.2E-91 T 13-10-2018 RPIT_06725 a7cdd50b12138338776314a79fc6aa1c 355 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 225 241 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RPIT_06725 a7cdd50b12138338776314a79fc6aa1c 355 Gene3D G3DSA:3.30.160.20 208 294 4.2E-91 T 13-10-2018 RPIT_06725 a7cdd50b12138338776314a79fc6aa1c 355 SUPERFAMILY SSF75620 8 350 1.31E-119 T 13-10-2018 RPIT_08860 d836add07cc47ee8c42ea58f02e7f361 311 SUPERFAMILY SSF161098 75 298 1.31E-49 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_08860 d836add07cc47ee8c42ea58f02e7f361 311 Gene3D G3DSA:1.10.3720.10 71 309 8.4E-57 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_08860 d836add07cc47ee8c42ea58f02e7f361 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 305 4.9E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_14125 95794f6cc9a588127bdb1df84cd00b92 642 SUPERFAMILY SSF56784 302 602 2.83E-50 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_14125 95794f6cc9a588127bdb1df84cd00b92 642 SUPERFAMILY SSF81665 65 569 1.44E-13 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 RPIT_14125 95794f6cc9a588127bdb1df84cd00b92 642 SUPERFAMILY SSF81653 115 212 4.05E-27 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 RPIT_14125 95794f6cc9a588127bdb1df84cd00b92 642 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 86 580 1.4E-74 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_14125 95794f6cc9a588127bdb1df84cd00b92 642 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 62 604 1.2E-167 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 RPIT_14125 95794f6cc9a588127bdb1df84cd00b92 642 Gene3D G3DSA:2.70.150.20 105 217 7.2E-36 T 13-10-2018 RPIT_14125 95794f6cc9a588127bdb1df84cd00b92 642 Pfam PF00702 haloacid dehalogenase-like hydrolase 300 515 4.7E-40 T 13-10-2018 RPIT_14125 95794f6cc9a588127bdb1df84cd00b92 642 Gene3D G3DSA:3.40.50.1000 285 554 9.6E-85 T 13-10-2018 IPR023214 HAD superfamily RPIT_14125 95794f6cc9a588127bdb1df84cd00b92 642 Pfam PF00122 E1-E2 ATPase 113 283 9.6E-47 T 13-10-2018 RPIT_14125 95794f6cc9a588127bdb1df84cd00b92 642 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 525 537 2.9E-24 T 13-10-2018 RPIT_14125 95794f6cc9a588127bdb1df84cd00b92 642 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 520 2.9E-24 T 13-10-2018 RPIT_14125 95794f6cc9a588127bdb1df84cd00b92 642 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 162 176 2.9E-24 T 13-10-2018 RPIT_14125 95794f6cc9a588127bdb1df84cd00b92 642 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 448 458 2.9E-24 T 13-10-2018 RPIT_14125 95794f6cc9a588127bdb1df84cd00b92 642 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 425 436 2.9E-24 T 13-10-2018 RPIT_14125 95794f6cc9a588127bdb1df84cd00b92 642 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 304 318 2.9E-24 T 13-10-2018 RPIT_14125 95794f6cc9a588127bdb1df84cd00b92 642 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 62 606 7.4E-144 T 13-10-2018 RPIT_14125 95794f6cc9a588127bdb1df84cd00b92 642 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 306 312 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 RPIT_14125 95794f6cc9a588127bdb1df84cd00b92 642 Gene3D G3DSA:3.40.1110.10 315 432 9.6E-85 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RPIT_09195 5c43c47b336cdcb2319e28e9d1c0bb23 534 Gene3D G3DSA:3.50.50.60 5 85 8.7E-14 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_09195 5c43c47b336cdcb2319e28e9d1c0bb23 534 Gene3D G3DSA:3.50.50.60 213 310 7.2E-12 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_09195 5c43c47b336cdcb2319e28e9d1c0bb23 534 Pfam PF13450 NAD(P)-binding Rossmann-like domain 9 55 4.6E-10 T 13-10-2018 RPIT_09195 5c43c47b336cdcb2319e28e9d1c0bb23 534 SUPERFAMILY SSF51905 3 505 2.01E-37 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_13175 539fd8d9228f5d89823830c6b1ca5449 626 Pfam PF00331 Glycosyl hydrolase family 10 48 467 1.7E-58 T 13-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 RPIT_13175 539fd8d9228f5d89823830c6b1ca5449 626 Gene3D G3DSA:3.20.20.80 32 470 8.1E-87 T 13-10-2018 RPIT_13175 539fd8d9228f5d89823830c6b1ca5449 626 SMART SM00633 91 469 6.4E-26 T 13-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 RPIT_13175 539fd8d9228f5d89823830c6b1ca5449 626 SUPERFAMILY SSF51445 44 468 6.47E-57 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_04885 400dc3d3bf2d6200e7187ecd05ec4e8d 189 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 65 87 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RPIT_04885 400dc3d3bf2d6200e7187ecd05ec4e8d 189 Gene3D G3DSA:1.20.120.1760 11 185 7.8E-7 T 13-10-2018 RPIT_04885 400dc3d3bf2d6200e7187ecd05ec4e8d 189 Pfam PF01066 CDP-alcohol phosphatidyltransferase 19 84 9.3E-7 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RPIT_05410 f73bffee23ccf505cef2f08ce0708d78 479 SUPERFAMILY SSF52540 85 371 1.78E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_05410 f73bffee23ccf505cef2f08ce0708d78 479 SMART SM00487 29 235 6.9E-55 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIT_05410 f73bffee23ccf505cef2f08ce0708d78 479 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 164 172 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RPIT_05410 f73bffee23ccf505cef2f08ce0708d78 479 Gene3D G3DSA:3.40.50.300 2 220 1.2E-70 T 13-10-2018 RPIT_05410 f73bffee23ccf505cef2f08ce0708d78 479 SMART SM00490 271 352 2.0E-34 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_05410 f73bffee23ccf505cef2f08ce0708d78 479 Gene3D G3DSA:3.40.50.300 228 401 1.5E-48 T 13-10-2018 RPIT_05410 f73bffee23ccf505cef2f08ce0708d78 479 Pfam PF00271 Helicase conserved C-terminal domain 243 352 4.7E-31 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_05410 f73bffee23ccf505cef2f08ce0708d78 479 Pfam PF00270 DEAD/DEAH box helicase 35 201 3.2E-47 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIT_10735 0caefde57e27056715c0c5a630a79126 279 Pfam PF08021 Siderophore-interacting FAD-binding domain 13 126 1.4E-32 T 13-10-2018 IPR013113 FAD-binding 9, siderophore-interacting RPIT_10735 0caefde57e27056715c0c5a630a79126 279 SUPERFAMILY SSF63380 7 126 2.15E-11 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel RPIT_10735 0caefde57e27056715c0c5a630a79126 279 Pfam PF04954 Siderophore-interacting protein 133 248 1.1E-27 T 13-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain RPIT_10735 0caefde57e27056715c0c5a630a79126 279 Gene3D G3DSA:3.40.50.80 128 270 6.3E-36 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RPIT_10735 0caefde57e27056715c0c5a630a79126 279 Gene3D G3DSA:2.40.30.10 1 126 1.7E-31 T 13-10-2018 RPIT_12615 c1de564675636f97a76b65820ad47634 238 ProSitePatterns PS00622 LuxR-type HTH domain signature. 187 214 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_12615 c1de564675636f97a76b65820ad47634 238 Pfam PF00072 Response regulator receiver domain 16 127 1.8E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_12615 c1de564675636f97a76b65820ad47634 238 Gene3D G3DSA:3.40.50.12740 14 233 1.8E-71 T 13-10-2018 RPIT_12615 c1de564675636f97a76b65820ad47634 238 SUPERFAMILY SSF52172 13 146 2.42E-33 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_12615 c1de564675636f97a76b65820ad47634 238 SMART SM00448 14 127 4.2E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_12615 c1de564675636f97a76b65820ad47634 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 203 215 1.9E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_12615 c1de564675636f97a76b65820ad47634 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 203 1.9E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_12615 c1de564675636f97a76b65820ad47634 238 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 187 1.9E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_12615 c1de564675636f97a76b65820ad47634 238 Pfam PF00196 Bacterial regulatory proteins, luxR family 172 227 1.0E-21 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_12615 c1de564675636f97a76b65820ad47634 238 SUPERFAMILY SSF46894 161 234 5.44E-23 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIT_12615 c1de564675636f97a76b65820ad47634 238 SMART SM00421 170 227 1.6E-26 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_01405 0e8b6d6edf53fd626846d482484fa89a 381 Gene3D G3DSA:3.40.50.300 148 348 2.5E-54 T 13-10-2018 RPIT_01405 0e8b6d6edf53fd626846d482484fa89a 381 TIGRFAM TIGR03819 heli_sec_ATPase: helicase/secretion neighborhood ATPase 7 343 4.3E-147 T 13-10-2018 IPR022399 Helicase/secretion neighbourhood ATPase RPIT_01405 0e8b6d6edf53fd626846d482484fa89a 381 Pfam PF00437 Type II/IV secretion system protein 56 331 2.3E-73 T 13-10-2018 IPR001482 Type II/IV secretion system protein RPIT_01405 0e8b6d6edf53fd626846d482484fa89a 381 SUPERFAMILY SSF52540 38 346 5.94E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01405 0e8b6d6edf53fd626846d482484fa89a 381 Gene3D G3DSA:3.30.450.380 15 147 4.7E-27 T 13-10-2018 RPIT_03375 3522b9a456fd39e185d848eb9f947196 189 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03375 3522b9a456fd39e185d848eb9f947196 189 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 24.473 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03375 3522b9a456fd39e185d848eb9f947196 189 SUPERFAMILY SSF64263 1 116 1.05E-42 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03375 3522b9a456fd39e185d848eb9f947196 189 Pfam PF01196 Ribosomal protein L17 20 116 1.1E-35 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03375 3522b9a456fd39e185d848eb9f947196 189 Gene3D G3DSA:3.90.1030.10 1 117 1.0E-41 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03375 3522b9a456fd39e185d848eb9f947196 189 TIGRFAM TIGR00059 L17: ribosomal protein bL17 9 116 1.0E-36 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_09570 3eeeba95c865f671e7523c75cf15e4f8 62 SUPERFAMILY SSF158997 5 60 6.67E-15 T 13-10-2018 RPIT_09570 3eeeba95c865f671e7523c75cf15e4f8 62 Gene3D G3DSA:2.20.25.10 25 61 2.7E-19 T 13-10-2018 RPIT_01605 0d8cc1e23f4dacd0fde6543a1f58dc6b 367 Gene3D G3DSA:1.10.645.20 16 367 1.1E-84 T 13-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_01605 0d8cc1e23f4dacd0fde6543a1f58dc6b 367 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 148 274 1.8E-22 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_01605 0d8cc1e23f4dacd0fde6543a1f58dc6b 367 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 291 367 7.2E-13 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_01605 0d8cc1e23f4dacd0fde6543a1f58dc6b 367 SUPERFAMILY SSF56762 28 366 5.89E-65 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_04715 c9f47d3c03701a354b0b95dc06a79a89 422 SUPERFAMILY SSF69075 294 390 1.44E-7 T 13-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RPIT_04715 c9f47d3c03701a354b0b95dc06a79a89 422 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 90 113 - T 13-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RPIT_04715 c9f47d3c03701a354b0b95dc06a79a89 422 Gene3D G3DSA:3.30.460.30 2 150 5.3E-33 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RPIT_04715 c9f47d3c03701a354b0b95dc06a79a89 422 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 7 147 2.0E-28 T 13-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RPIT_04715 c9f47d3c03701a354b0b95dc06a79a89 422 Gene3D G3DSA:3.40.50.720 154 288 2.6E-27 T 13-10-2018 RPIT_04715 c9f47d3c03701a354b0b95dc06a79a89 422 PIRSF PIRSF000445 1 401 1.1E-79 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RPIT_04715 c9f47d3c03701a354b0b95dc06a79a89 422 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 295 388 3.3E-10 T 13-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RPIT_04715 c9f47d3c03701a354b0b95dc06a79a89 422 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 167 281 2.8E-10 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RPIT_04715 c9f47d3c03701a354b0b95dc06a79a89 422 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 387 18.195 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RPIT_04715 c9f47d3c03701a354b0b95dc06a79a89 422 SUPERFAMILY SSF51735 168 288 2.33E-13 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_04715 c9f47d3c03701a354b0b95dc06a79a89 422 SUPERFAMILY SSF69742 1 148 1.44E-31 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RPIT_11145 e051c17a1fb34965bff5a7f2dc3fbb73 859 SUPERFAMILY SSF56059 288 666 2.12E-31 T 13-10-2018 RPIT_11145 e051c17a1fb34965bff5a7f2dc3fbb73 859 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 289 670 3.2E-41 T 13-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 RPIT_11145 e051c17a1fb34965bff5a7f2dc3fbb73 859 Gene3D G3DSA:3.30.1490.20 341 464 9.1E-16 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 RPIT_01260 4109d32c0d7dc5690a7f26cd7138d70e 340 SUPERFAMILY SSF51735 14 170 2.63E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_01260 4109d32c0d7dc5690a7f26cd7138d70e 340 Gene3D G3DSA:3.40.50.720 15 135 4.7E-37 T 13-10-2018 RPIT_01260 4109d32c0d7dc5690a7f26cd7138d70e 340 Gene3D G3DSA:3.30.360.10 136 338 3.2E-48 T 13-10-2018 RPIT_01260 4109d32c0d7dc5690a7f26cd7138d70e 340 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 18 134 9.3E-23 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 RPIT_01260 4109d32c0d7dc5690a7f26cd7138d70e 340 SUPERFAMILY SSF55347 142 310 2.29E-28 T 13-10-2018 RPIT_01860 5f3b0f5334ccd058d332508d9ce31be8 236 Gene3D G3DSA:3.40.50.510 1 129 9.2E-41 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 RPIT_01860 5f3b0f5334ccd058d332508d9ce31be8 236 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 3 123 1.0E-33 T 13-10-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain RPIT_01860 5f3b0f5334ccd058d332508d9ce31be8 236 SUPERFAMILY SSF53062 1 125 4.06E-30 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 RPIT_01860 5f3b0f5334ccd058d332508d9ce31be8 236 PRINTS PR00107 Phosphocarrier protein signature 187 202 1.8E-9 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_01860 5f3b0f5334ccd058d332508d9ce31be8 236 PRINTS PR00107 Phosphocarrier protein signature 202 219 1.8E-9 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_01860 5f3b0f5334ccd058d332508d9ce31be8 236 PRINTS PR00107 Phosphocarrier protein signature 161 177 1.8E-9 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_01860 5f3b0f5334ccd058d332508d9ce31be8 236 Pfam PF00381 PTS HPr component phosphorylation site 152 231 4.0E-25 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_01860 5f3b0f5334ccd058d332508d9ce31be8 236 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 151 230 1.6E-19 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like RPIT_01860 5f3b0f5334ccd058d332508d9ce31be8 236 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 161 168 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RPIT_01860 5f3b0f5334ccd058d332508d9ce31be8 236 Gene3D G3DSA:3.30.1340.10 151 236 8.9E-25 T 13-10-2018 IPR035895 HPr-like superfamily RPIT_01860 5f3b0f5334ccd058d332508d9ce31be8 236 Pfam PF03610 PTS system fructose IIA component 4 117 2.1E-25 T 13-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RPIT_01860 5f3b0f5334ccd058d332508d9ce31be8 236 SUPERFAMILY SSF55594 151 236 1.44E-22 T 13-10-2018 IPR035895 HPr-like superfamily RPIT_00830 b7d8b72efa782d8bc91c1a6874e0072c 130 SUPERFAMILY SSF103247 2 127 1.19E-32 T 13-10-2018 IPR035923 TT1751-like domain superfamily RPIT_00830 b7d8b72efa782d8bc91c1a6874e0072c 130 Pfam PF03625 Domain of unknown function DUF302 35 97 8.1E-23 T 13-10-2018 IPR005180 Domain of unknown function DUF302 RPIT_00830 b7d8b72efa782d8bc91c1a6874e0072c 130 PIRSF PIRSF021774 1 129 3.6E-41 T 13-10-2018 IPR016796 Uncharacterised conserved protein UCP021774 RPIT_00830 b7d8b72efa782d8bc91c1a6874e0072c 130 Gene3D G3DSA:3.30.310.70 3 127 2.0E-43 T 13-10-2018 IPR035923 TT1751-like domain superfamily RPIT_00465 bb4d178b8e6f3d3a4ce19fa148b43dfe 473 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RPIT_00465 bb4d178b8e6f3d3a4ce19fa148b43dfe 473 SUPERFAMILY SSF69864 190 435 1.26E-73 T 13-10-2018 RPIT_00465 bb4d178b8e6f3d3a4ce19fa148b43dfe 473 Gene3D G3DSA:3.40.50.620 14 191 8.7E-110 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_00465 bb4d178b8e6f3d3a4ce19fa148b43dfe 473 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 420 1.3E-135 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RPIT_00465 bb4d178b8e6f3d3a4ce19fa148b43dfe 473 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 469 70.304 T 13-10-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RPIT_00465 bb4d178b8e6f3d3a4ce19fa148b43dfe 473 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RPIT_00465 bb4d178b8e6f3d3a4ce19fa148b43dfe 473 Pfam PF00764 Arginosuccinate synthase 16 410 4.0E-56 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RPIT_00465 bb4d178b8e6f3d3a4ce19fa148b43dfe 473 Gene3D G3DSA:1.10.287.400 377 441 2.5E-27 T 13-10-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RPIT_00465 bb4d178b8e6f3d3a4ce19fa148b43dfe 473 Gene3D G3DSA:3.90.1260.10 74 367 8.7E-110 T 13-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RPIT_00465 bb4d178b8e6f3d3a4ce19fa148b43dfe 473 SUPERFAMILY SSF52402 5 187 1.43E-29 T 13-10-2018 RPIT_03440 27763748d3be0d1c87becca717448ba2 693 Pfam PF00009 Elongation factor Tu GTP binding domain 16 215 3.2E-21 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_03440 27763748d3be0d1c87becca717448ba2 693 Pfam PF00679 Elongation factor G C-terminus 605 687 6.8E-18 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like RPIT_03440 27763748d3be0d1c87becca717448ba2 693 Pfam PF14492 Elongation Factor G, domain II 408 479 4.5E-18 T 13-10-2018 RPIT_03440 27763748d3be0d1c87becca717448ba2 693 Gene3D G3DSA:3.40.50.300 10 277 2.0E-44 T 13-10-2018 RPIT_03440 27763748d3be0d1c87becca717448ba2 693 SMART SM00838 604 692 3.1E-15 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like RPIT_03440 27763748d3be0d1c87becca717448ba2 693 SUPERFAMILY SSF52540 14 271 1.19E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_03440 27763748d3be0d1c87becca717448ba2 693 PRINTS PR00315 GTP-binding elongation factor signature 71 81 1.5E-7 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_03440 27763748d3be0d1c87becca717448ba2 693 PRINTS PR00315 GTP-binding elongation factor signature 123 132 1.5E-7 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_03440 27763748d3be0d1c87becca717448ba2 693 PRINTS PR00315 GTP-binding elongation factor signature 19 32 1.5E-7 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_03440 27763748d3be0d1c87becca717448ba2 693 PRINTS PR00315 GTP-binding elongation factor signature 87 98 1.5E-7 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_03440 27763748d3be0d1c87becca717448ba2 693 Gene3D G3DSA:3.30.230.10 488 687 5.7E-69 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIT_03440 27763748d3be0d1c87becca717448ba2 693 Gene3D G3DSA:3.30.70.240 608 679 5.7E-69 T 13-10-2018 RPIT_03440 27763748d3be0d1c87becca717448ba2 693 Gene3D G3DSA:2.40.30.10 286 414 4.6E-22 T 13-10-2018 RPIT_03440 27763748d3be0d1c87becca717448ba2 693 Pfam PF03764 Elongation factor G, domain IV 484 600 2.6E-36 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RPIT_03440 27763748d3be0d1c87becca717448ba2 693 SUPERFAMILY SSF54980 605 687 3.31E-17 T 13-10-2018 IPR035647 EF-G domain III/V-like RPIT_03440 27763748d3be0d1c87becca717448ba2 693 SMART SM00889 484 602 4.1E-55 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RPIT_03440 27763748d3be0d1c87becca717448ba2 693 SUPERFAMILY SSF54211 484 600 6.57E-34 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RPIT_03440 27763748d3be0d1c87becca717448ba2 693 Gene3D G3DSA:3.30.70.870 415 486 1.4E-13 T 13-10-2018 RPIT_03440 27763748d3be0d1c87becca717448ba2 693 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 18 141 6.0E-15 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RPIT_03440 27763748d3be0d1c87becca717448ba2 693 SUPERFAMILY SSF54980 409 485 4.32E-14 T 13-10-2018 IPR035647 EF-G domain III/V-like RPIT_03440 27763748d3be0d1c87becca717448ba2 693 SUPERFAMILY SSF50447 288 402 2.17E-18 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily RPIT_07340 511be4687279f69c7260d9b8ecffa093 1029 Gene3D G3DSA:2.60.120.260 394 545 6.9E-30 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_07340 511be4687279f69c7260d9b8ecffa093 1029 SUPERFAMILY SSF75005 39 334 2.71E-45 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RPIT_07340 511be4687279f69c7260d9b8ecffa093 1029 Gene3D G3DSA:2.115.10.20 34 346 2.9E-51 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RPIT_07340 511be4687279f69c7260d9b8ecffa093 1029 Pfam PF04616 Glycosyl hydrolases family 43 41 328 4.5E-27 T 13-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 RPIT_07340 511be4687279f69c7260d9b8ecffa093 1029 SUPERFAMILY SSF49785 395 543 3.97E-22 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_07340 511be4687279f69c7260d9b8ecffa093 1029 Gene3D G3DSA:2.60.120.200 556 776 1.3E-62 T 13-10-2018 RPIT_07340 511be4687279f69c7260d9b8ecffa093 1029 SUPERFAMILY SSF49899 560 775 6.73E-31 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RPIT_07340 511be4687279f69c7260d9b8ecffa093 1029 Pfam PF02018 Carbohydrate binding domain 397 522 4.5E-15 T 13-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 RPIT_09115 6b48d655107c5b3f466c1d7ce3b8edae 374 SUPERFAMILY SSF53335 12 359 1.2E-43 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_09115 6b48d655107c5b3f466c1d7ce3b8edae 374 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 13 29 1.3E-6 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 RPIT_09115 6b48d655107c5b3f466c1d7ce3b8edae 374 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 115 129 1.3E-6 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 RPIT_09115 6b48d655107c5b3f466c1d7ce3b8edae 374 Pfam PF00145 C-5 cytosine-specific DNA methylase 13 131 1.1E-26 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 RPIT_13205 55755a8b30111d51804dbb0f45cc1e28 316 Gene3D G3DSA:1.10.1660.10 28 102 7.7E-20 T 13-10-2018 RPIT_13205 55755a8b30111d51804dbb0f45cc1e28 316 Gene3D G3DSA:1.10.1240.10 115 191 7.9E-15 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_13205 55755a8b30111d51804dbb0f45cc1e28 316 SUPERFAMILY SSF52242 194 289 9.58E-12 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 RPIT_13205 55755a8b30111d51804dbb0f45cc1e28 316 Pfam PF02310 B12 binding domain 204 286 1.2E-9 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 RPIT_13205 55755a8b30111d51804dbb0f45cc1e28 316 SMART SM00422 33 102 6.4E-7 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_13205 55755a8b30111d51804dbb0f45cc1e28 316 SUPERFAMILY SSF46955 33 99 9.61E-13 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily RPIT_13205 55755a8b30111d51804dbb0f45cc1e28 316 Pfam PF02607 B12 binding domain 119 185 1.8E-5 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_13205 55755a8b30111d51804dbb0f45cc1e28 316 Pfam PF13411 MerR HTH family regulatory protein 33 97 9.6E-12 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_13205 55755a8b30111d51804dbb0f45cc1e28 316 Gene3D G3DSA:3.40.50.280 194 306 7.9E-17 T 13-10-2018 RPIT_14005 0136316bc9a93eee72107f4f35eeb4bd 357 Gene3D G3DSA:3.90.550.10 1 209 4.3E-43 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_14005 0136316bc9a93eee72107f4f35eeb4bd 357 SUPERFAMILY SSF53448 1 226 1.27E-46 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_14005 0136316bc9a93eee72107f4f35eeb4bd 357 Pfam PF00535 Glycosyl transferase family 2 1 133 7.5E-32 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RPIT_01655 1c97566ce777d4a3e928618d4c7ed4ba 461 SMART SM00382 84 238 1.0E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_01655 1c97566ce777d4a3e928618d4c7ed4ba 461 Pfam PF13541 Subunit ChlI of Mg-chelatase 362 423 2.4E-8 T 13-10-2018 RPIT_01655 1c97566ce777d4a3e928618d4c7ed4ba 461 Gene3D G3DSA:3.40.50.300 60 274 1.2E-39 T 13-10-2018 RPIT_01655 1c97566ce777d4a3e928618d4c7ed4ba 461 Gene3D G3DSA:3.30.230.10 290 460 2.1E-14 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIT_01655 1c97566ce777d4a3e928618d4c7ed4ba 461 SUPERFAMILY SSF54211 249 453 4.93E-34 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RPIT_01655 1c97566ce777d4a3e928618d4c7ed4ba 461 Hamap MF_01498 DNA repair protein RadA [radA]. 21 454 42.143 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 RPIT_01655 1c97566ce777d4a3e928618d4c7ed4ba 461 Pfam PF13481 AAA domain 64 216 9.3E-18 T 13-10-2018 RPIT_01655 1c97566ce777d4a3e928618d4c7ed4ba 461 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 450 1.1E-155 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 RPIT_01655 1c97566ce777d4a3e928618d4c7ed4ba 461 PRINTS PR01874 DNA repair protein radA signature 76 104 3.7E-84 T 13-10-2018 RPIT_01655 1c97566ce777d4a3e928618d4c7ed4ba 461 PRINTS PR01874 DNA repair protein radA signature 168 192 3.7E-84 T 13-10-2018 RPIT_01655 1c97566ce777d4a3e928618d4c7ed4ba 461 PRINTS PR01874 DNA repair protein radA signature 317 340 3.7E-84 T 13-10-2018 RPIT_01655 1c97566ce777d4a3e928618d4c7ed4ba 461 PRINTS PR01874 DNA repair protein radA signature 118 135 3.7E-84 T 13-10-2018 RPIT_01655 1c97566ce777d4a3e928618d4c7ed4ba 461 PRINTS PR01874 DNA repair protein radA signature 207 235 3.7E-84 T 13-10-2018 RPIT_01655 1c97566ce777d4a3e928618d4c7ed4ba 461 PRINTS PR01874 DNA repair protein radA signature 10 34 3.7E-84 T 13-10-2018 RPIT_01655 1c97566ce777d4a3e928618d4c7ed4ba 461 PRINTS PR01874 DNA repair protein radA signature 242 268 3.7E-84 T 13-10-2018 RPIT_01655 1c97566ce777d4a3e928618d4c7ed4ba 461 SUPERFAMILY SSF52540 62 285 2.09E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_03735 a6691ae987dfe457ab8290fa91eb2eee 345 Gene3D G3DSA:1.20.970.10 4 69 1.8E-22 T 13-10-2018 RPIT_03735 a6691ae987dfe457ab8290fa91eb2eee 345 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 68 9.8E-18 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 RPIT_03735 a6691ae987dfe457ab8290fa91eb2eee 345 SUPERFAMILY SSF47648 6 72 1.16E-16 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 RPIT_03735 a6691ae987dfe457ab8290fa91eb2eee 345 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 8 342 34.105 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 RPIT_03735 a6691ae987dfe457ab8290fa91eb2eee 345 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 13 341 2.6E-105 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 RPIT_03735 a6691ae987dfe457ab8290fa91eb2eee 345 SUPERFAMILY SSF52418 77 344 4.32E-79 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 RPIT_03735 a6691ae987dfe457ab8290fa91eb2eee 345 Pfam PF00591 Glycosyl transferase family, a/b domain 76 332 6.2E-80 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RPIT_03735 a6691ae987dfe457ab8290fa91eb2eee 345 Gene3D G3DSA:3.40.1030.10 76 345 9.6E-98 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 RPIT_05495 52614b2fc250a45ee2f96b2395834686 816 Gene3D G3DSA:2.120.10.90 491 776 4.4E-44 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal RPIT_05495 52614b2fc250a45ee2f96b2395834686 816 SUPERFAMILY SSF101904 510 770 8.89E-40 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal RPIT_05495 52614b2fc250a45ee2f96b2395834686 816 SMART SM00434 19 472 2.2E-240 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RPIT_05495 52614b2fc250a45ee2f96b2395834686 816 Gene3D G3DSA:3.30.1360.40 243 340 9.0E-189 T 13-10-2018 RPIT_05495 52614b2fc250a45ee2f96b2395834686 816 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 40 476 4.6E-145 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RPIT_05495 52614b2fc250a45ee2f96b2395834686 816 Gene3D G3DSA:3.90.199.10 40 490 9.0E-189 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 RPIT_05495 52614b2fc250a45ee2f96b2395834686 816 Gene3D G3DSA:1.10.268.10 377 465 9.0E-189 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RPIT_05495 52614b2fc250a45ee2f96b2395834686 816 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 727 758 2.8E-4 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIT_05495 52614b2fc250a45ee2f96b2395834686 816 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 619 653 1.2 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIT_05495 52614b2fc250a45ee2f96b2395834686 816 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 662 707 1.1E-5 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIT_05495 52614b2fc250a45ee2f96b2395834686 816 SUPERFAMILY SSF56719 39 494 1.31E-160 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RPIT_13020 2ae8b404a599280232b49d7ea40f5e5c 284 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 202 283 3.2E-30 T 13-10-2018 IPR012997 Rare lipoprotein A RPIT_13020 2ae8b404a599280232b49d7ea40f5e5c 284 Gene3D G3DSA:2.40.40.10 193 284 1.8E-32 T 13-10-2018 IPR036908 RlpA-like domain superfamily RPIT_13020 2ae8b404a599280232b49d7ea40f5e5c 284 Pfam PF03330 Lytic transglycolase 198 278 3.5E-23 T 13-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain RPIT_13020 2ae8b404a599280232b49d7ea40f5e5c 284 SUPERFAMILY SSF50685 200 282 4.53E-14 T 13-10-2018 IPR036908 RlpA-like domain superfamily RPIT_13020 2ae8b404a599280232b49d7ea40f5e5c 284 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 11 283 21.152 T 13-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 RPIT_11685 0e708c86c7f7ea43918fb1f2dbae1dba 392 Pfam PF13810 Domain of unknown function (DUF4185) 173 349 3.6E-14 T 13-10-2018 IPR025442 Domain of unknown function DUF4185 RPIT_03895 4ed26ac827f81653fe18663c47da2fc5 443 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 2.8E-120 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RPIT_03895 4ed26ac827f81653fe18663c47da2fc5 443 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 298 4.2E-32 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_03895 4ed26ac827f81653fe18663c47da2fc5 443 SUPERFAMILY SSF48179 205 304 3.51E-27 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 RPIT_03895 4ed26ac827f81653fe18663c47da2fc5 443 Gene3D G3DSA:1.20.5.100 205 234 1.0E-14 T 13-10-2018 RPIT_03895 4ed26ac827f81653fe18663c47da2fc5 443 PIRSF PIRSF500134 1 442 2.9E-148 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 RPIT_03895 4ed26ac827f81653fe18663c47da2fc5 443 Gene3D G3DSA:3.40.50.720 236 442 5.3E-64 T 13-10-2018 RPIT_03895 4ed26ac827f81653fe18663c47da2fc5 443 SMART SM00984 323 424 5.7E-39 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_03895 4ed26ac827f81653fe18663c47da2fc5 443 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 177 1.1E-53 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_03895 4ed26ac827f81653fe18663c47da2fc5 443 Gene3D G3DSA:3.40.50.720 1 198 1.5E-61 T 13-10-2018 RPIT_03895 4ed26ac827f81653fe18663c47da2fc5 443 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 424 1.8E-25 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_03895 4ed26ac827f81653fe18663c47da2fc5 443 PIRSF PIRSF000124 1 439 1.2E-121 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RPIT_03895 4ed26ac827f81653fe18663c47da2fc5 443 SUPERFAMILY SSF51735 1 179 6.24E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_03895 4ed26ac827f81653fe18663c47da2fc5 443 SUPERFAMILY SSF52413 313 434 2.09E-34 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 RPIT_05535 77509645c4d056ae170cb1cdb335ce00 98 Pfam PF13834 Domain of unknown function (DUF4193) 1 98 1.7E-43 T 13-10-2018 IPR025242 Protein of unknown function DUF4193 RPIT_06355 4b4f1d961aa5f66de8f27f0f4d2f06c7 782 SUPERFAMILY SSF56784 555 765 4.05E-22 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_06355 4b4f1d961aa5f66de8f27f0f4d2f06c7 782 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 556 753 2.8E-29 T 13-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like RPIT_06355 4b4f1d961aa5f66de8f27f0f4d2f06c7 782 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 556 741 1.9E-12 T 13-10-2018 RPIT_06355 4b4f1d961aa5f66de8f27f0f4d2f06c7 782 Gene3D G3DSA:3.40.50.1000 556 768 6.7E-45 T 13-10-2018 IPR023214 HAD superfamily RPIT_06355 4b4f1d961aa5f66de8f27f0f4d2f06c7 782 SUPERFAMILY SSF51735 35 396 8.0E-28 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_06355 4b4f1d961aa5f66de8f27f0f4d2f06c7 782 Gene3D G3DSA:1.20.1440.100 568 643 6.7E-45 T 13-10-2018 RPIT_06355 4b4f1d961aa5f66de8f27f0f4d2f06c7 782 Pfam PF07993 Male sterility protein 39 356 1.5E-44 T 13-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 RPIT_06355 4b4f1d961aa5f66de8f27f0f4d2f06c7 782 Pfam PF12710 haloacid dehalogenase-like hydrolase 557 741 3.0E-30 T 13-10-2018 RPIT_06355 4b4f1d961aa5f66de8f27f0f4d2f06c7 782 Pfam PF03015 Male sterility protein 462 522 1.8E-7 T 13-10-2018 IPR033640 Fatty acyl-CoA reductase, C-terminal KEGG: 00073+1.2.1.84|MetaCyc: PWY-5884|MetaCyc: PWY-6733|MetaCyc: PWY-7656|MetaCyc: PWY-7782|Reactome: R-HSA-8848584 RPIT_13665 9906675e7dd256064e7ede5330932877 685 Pfam PF01751 Toprim domain 464 575 5.6E-15 T 13-10-2018 IPR006171 TOPRIM domain RPIT_13665 9906675e7dd256064e7ede5330932877 685 SUPERFAMILY SSF54211 263 435 1.69E-55 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RPIT_13665 9906675e7dd256064e7ede5330932877 685 Gene3D G3DSA:3.40.50.670 444 685 1.4E-96 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RPIT_13665 9906675e7dd256064e7ede5330932877 685 ProSitePatterns PS00177 DNA topoisomerase II signature. 467 475 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RPIT_13665 9906675e7dd256064e7ede5330932877 685 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 617 674 7.8E-28 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_13665 9906675e7dd256064e7ede5330932877 685 Pfam PF00204 DNA gyrase B 263 434 3.8E-61 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RPIT_13665 9906675e7dd256064e7ede5330932877 685 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 33 685 87.077 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIT_13665 9906675e7dd256064e7ede5330932877 685 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 36 685 2.8E-278 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIT_13665 9906675e7dd256064e7ede5330932877 685 SUPERFAMILY SSF55874 36 240 1.72E-68 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_13665 9906675e7dd256064e7ede5330932877 685 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 63 203 3.2E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_13665 9906675e7dd256064e7ede5330932877 685 Gene3D G3DSA:3.30.230.10 261 441 2.0E-68 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIT_13665 9906675e7dd256064e7ede5330932877 685 SMART SM00387 61 183 3.9E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_13665 9906675e7dd256064e7ede5330932877 685 Gene3D G3DSA:3.30.565.10 33 247 3.9E-85 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR00418 DNA topoisomerase II family signature 569 581 3.4E-67 T 13-10-2018 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR00418 DNA topoisomerase II family signature 617 633 3.4E-67 T 13-10-2018 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR00418 DNA topoisomerase II family signature 531 547 3.4E-67 T 13-10-2018 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR00418 DNA topoisomerase II family signature 65 80 3.4E-67 T 13-10-2018 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR00418 DNA topoisomerase II family signature 100 113 3.4E-67 T 13-10-2018 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR00418 DNA topoisomerase II family signature 465 479 3.4E-67 T 13-10-2018 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR00418 DNA topoisomerase II family signature 143 157 3.4E-67 T 13-10-2018 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR00418 DNA topoisomerase II family signature 549 566 3.4E-67 T 13-10-2018 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR00418 DNA topoisomerase II family signature 312 325 3.4E-67 T 13-10-2018 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR01159 DNA gyrase subunit B signature 654 670 3.2E-69 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR01159 DNA gyrase subunit B signature 225 238 3.2E-69 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR01159 DNA gyrase subunit B signature 638 650 3.2E-69 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR01159 DNA gyrase subunit B signature 36 46 3.2E-69 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR01159 DNA gyrase subunit B signature 356 372 3.2E-69 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR01159 DNA gyrase subunit B signature 286 304 3.2E-69 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR01159 DNA gyrase subunit B signature 404 418 3.2E-69 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR01159 DNA gyrase subunit B signature 418 438 3.2E-69 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR01159 DNA gyrase subunit B signature 210 225 3.2E-69 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR01159 DNA gyrase subunit B signature 515 524 3.2E-69 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_13665 9906675e7dd256064e7ede5330932877 685 PRINTS PR01159 DNA gyrase subunit B signature 262 284 3.2E-69 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIT_13665 9906675e7dd256064e7ede5330932877 685 SMART SM00433 65 678 0.0 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RPIT_13665 9906675e7dd256064e7ede5330932877 685 SUPERFAMILY SSF56719 439 680 2.88E-81 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RPIT_14055 f5c2d97297e13cdbb7c99ad6afa58f73 155 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 145 3.7E-23 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I RPIT_14055 f5c2d97297e13cdbb7c99ad6afa58f73 155 Gene3D G3DSA:3.40.50.2300 1 153 5.6E-39 T 13-10-2018 RPIT_14055 f5c2d97297e13cdbb7c99ad6afa58f73 155 SMART SM00226 1 149 3.1E-16 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I RPIT_14055 f5c2d97297e13cdbb7c99ad6afa58f73 155 SUPERFAMILY SSF52788 4 147 1.24E-29 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily RPIT_14055 f5c2d97297e13cdbb7c99ad6afa58f73 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 42 58 1.4E-5 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RPIT_14055 f5c2d97297e13cdbb7c99ad6afa58f73 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 121 136 1.4E-5 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RPIT_14055 f5c2d97297e13cdbb7c99ad6afa58f73 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 76 91 1.4E-5 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RPIT_14055 f5c2d97297e13cdbb7c99ad6afa58f73 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 1.4E-5 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RPIT_05285 34e414c5ebfbbbed90bdfb6a00459a70 151 Gene3D G3DSA:1.10.10.410 94 151 2.5E-14 T 13-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RPIT_05285 34e414c5ebfbbbed90bdfb6a00459a70 151 Gene3D G3DSA:1.10.1510.10 3 93 1.5E-19 T 13-10-2018 RPIT_05285 34e414c5ebfbbbed90bdfb6a00459a70 151 Pfam PF09424 Yqey-like protein 5 150 4.3E-40 T 13-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 RPIT_05285 34e414c5ebfbbbed90bdfb6a00459a70 151 SUPERFAMILY SSF89095 5 150 4.24E-29 T 13-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 RPIT_06930 83ce327087e6cd361691ca1a869091bf 567 Gene3D G3DSA:3.40.50.300 126 336 5.6E-50 T 13-10-2018 RPIT_06930 83ce327087e6cd361691ca1a869091bf 567 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 21 567 39.538 T 13-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 RPIT_06930 83ce327087e6cd361691ca1a869091bf 567 SUPERFAMILY SSF52540 161 552 2.35E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06930 83ce327087e6cd361691ca1a869091bf 567 SMART SM00382 175 331 5.3E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_06930 83ce327087e6cd361691ca1a869091bf 567 Gene3D G3DSA:1.10.10.1020 8 125 4.3E-12 T 13-10-2018 RPIT_06930 83ce327087e6cd361691ca1a869091bf 567 Gene3D G3DSA:3.40.50.300 460 560 2.8E-23 T 13-10-2018 RPIT_06930 83ce327087e6cd361691ca1a869091bf 567 Gene3D G3DSA:3.40.50.300 337 445 2.0E-5 T 13-10-2018 RPIT_06930 83ce327087e6cd361691ca1a869091bf 567 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 13 567 2.4E-118 T 13-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 RPIT_06930 83ce327087e6cd361691ca1a869091bf 567 Pfam PF13604 AAA domain 163 358 7.1E-37 T 13-10-2018 RPIT_06930 83ce327087e6cd361691ca1a869091bf 567 Pfam PF13538 UvrD-like helicase C-terminal domain 501 546 6.8E-15 T 13-10-2018 IPR027785 UvrD-like helicase C-terminal domain RPIT_04845 6cc1c9aa599c6bbd7a868fbc5481025a 331 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 123 2.2E-25 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 RPIT_04845 6cc1c9aa599c6bbd7a868fbc5481025a 331 Gene3D G3DSA:3.30.360.10 130 322 1.3E-44 T 13-10-2018 RPIT_04845 6cc1c9aa599c6bbd7a868fbc5481025a 331 SUPERFAMILY SSF51735 3 157 2.44E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_04845 6cc1c9aa599c6bbd7a868fbc5481025a 331 SUPERFAMILY SSF55347 132 295 1.44E-29 T 13-10-2018 RPIT_04845 6cc1c9aa599c6bbd7a868fbc5481025a 331 Gene3D G3DSA:3.40.50.720 4 129 1.1E-37 T 13-10-2018 RPIT_04845 6cc1c9aa599c6bbd7a868fbc5481025a 331 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 138 232 7.4E-5 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 RPIT_05005 8c98898238ef039233f9f88a40518456 412 PIRSF PIRSF006060 2 406 6.2E-60 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 RPIT_05005 8c98898238ef039233f9f88a40518456 412 Pfam PF13520 Amino acid permease 10 382 1.2E-34 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 RPIT_05005 8c98898238ef039233f9f88a40518456 412 Gene3D G3DSA:1.20.1740.10 5 409 2.6E-74 T 13-10-2018 RPIT_12395 b412caa2a7a7d0680904c131b43feca3 309 Pfam PF00480 ROK family 5 293 4.4E-58 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RPIT_12395 b412caa2a7a7d0680904c131b43feca3 309 SUPERFAMILY SSF53067 1 297 2.94E-57 T 13-10-2018 RPIT_12395 b412caa2a7a7d0680904c131b43feca3 309 ProSitePatterns PS01125 ROK family signature. 136 163 - T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RPIT_12395 b412caa2a7a7d0680904c131b43feca3 309 Gene3D G3DSA:3.30.420.40 5 292 2.2E-76 T 13-10-2018 RPIT_12395 b412caa2a7a7d0680904c131b43feca3 309 Gene3D G3DSA:3.30.420.40 128 279 2.2E-76 T 13-10-2018 RPIT_10005 1fc2a5308de28e0fc4a02d914c5c870a 387 Gene3D G3DSA:3.40.50.150 81 245 1.7E-27 T 13-10-2018 RPIT_10005 1fc2a5308de28e0fc4a02d914c5c870a 387 SUPERFAMILY SSF53335 68 196 1.23E-15 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_04380 ef3201aca934ffec8525698284c95a36 396 Pfam PF07730 Histidine kinase 168 231 3.0E-11 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RPIT_04380 ef3201aca934ffec8525698284c95a36 396 SUPERFAMILY SSF55874 255 364 3.21E-7 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_04380 ef3201aca934ffec8525698284c95a36 396 Gene3D G3DSA:3.30.565.10 242 366 4.3E-17 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_06165 e5ab6efa70921d2a8a81b79d4c1e7b3b 103 SUPERFAMILY SSF46946 56 102 9.42E-7 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RPIT_06165 e5ab6efa70921d2a8a81b79d4c1e7b3b 103 Gene3D G3DSA:1.10.8.50 1 103 5.2E-34 T 13-10-2018 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 ProSitePatterns PS00433 Phosphofructokinase signature. 279 297 - T 13-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 Gene3D G3DSA:3.40.50.450 391 709 8.1E-115 T 13-10-2018 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 Gene3D G3DSA:3.40.50.450 4 348 2.6E-157 T 13-10-2018 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 Gene3D G3DSA:3.40.50.460 533 726 8.1E-115 T 13-10-2018 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 SUPERFAMILY SSF53784 3 345 2.35E-99 T 13-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 6.5E-86 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 6.5E-86 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 164 182 6.5E-86 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 202 219 6.5E-86 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 146 163 6.5E-86 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 241 253 6.5E-86 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 96 112 6.5E-86 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 184 200 6.5E-86 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 275 297 6.5E-86 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 ProSitePatterns PS00433 Phosphofructokinase signature. 643 661 - T 13-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 Pfam PF00365 Phosphofructokinase 390 672 4.7E-79 T 13-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 Pfam PF00365 Phosphofructokinase 4 309 3.7E-105 T 13-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 Gene3D G3DSA:3.40.50.460 168 373 2.6E-157 T 13-10-2018 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 SUPERFAMILY SSF53784 362 724 2.62E-84 T 13-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_05260 52d4a3ee88d5bf654ead02facf793e2c 736 TIGRFAM TIGR02478 6PF1K_euk: 6-phosphofructokinase 4 732 1.9E-273 T 13-10-2018 IPR009161 ATP-dependent 6-phosphofructokinase, eukaryotic-type GO:0003872|GO:0005524|GO:0005737|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RPIT_00345 b0fc31183374bb34c55d62a94e88802c 814 SUPERFAMILY SSF56300 42 327 2.76E-58 T 13-10-2018 RPIT_00345 b0fc31183374bb34c55d62a94e88802c 814 PRINTS PR01607 Apyrase family signature 43 61 2.2E-21 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RPIT_00345 b0fc31183374bb34c55d62a94e88802c 814 PRINTS PR01607 Apyrase family signature 217 234 2.2E-21 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RPIT_00345 b0fc31183374bb34c55d62a94e88802c 814 PRINTS PR01607 Apyrase family signature 278 298 2.2E-21 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RPIT_00345 b0fc31183374bb34c55d62a94e88802c 814 PRINTS PR01607 Apyrase family signature 407 430 2.2E-21 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RPIT_00345 b0fc31183374bb34c55d62a94e88802c 814 PRINTS PR01607 Apyrase family signature 482 501 2.2E-21 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RPIT_00345 b0fc31183374bb34c55d62a94e88802c 814 Pfam PF02872 5'-nucleotidase, C-terminal domain 347 505 1.5E-31 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RPIT_00345 b0fc31183374bb34c55d62a94e88802c 814 Gene3D G3DSA:3.60.21.10 43 328 1.2E-64 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like RPIT_00345 b0fc31183374bb34c55d62a94e88802c 814 SUPERFAMILY SSF55816 345 541 3.01E-38 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RPIT_00345 b0fc31183374bb34c55d62a94e88802c 814 Pfam PF00149 Calcineurin-like phosphoesterase 47 268 3.2E-10 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 RPIT_00345 b0fc31183374bb34c55d62a94e88802c 814 Gene3D G3DSA:3.90.780.10 355 549 1.7E-42 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RPIT_10820 e1dc5ebe47ba7fc7a24e170d54acd2ba 200 SUPERFAMILY SSF89155 7 198 1.83E-38 T 13-10-2018 IPR036411 TorD-like superfamily RPIT_10820 e1dc5ebe47ba7fc7a24e170d54acd2ba 200 Gene3D G3DSA:1.10.3480.10 2 200 4.2E-45 T 13-10-2018 RPIT_10820 e1dc5ebe47ba7fc7a24e170d54acd2ba 200 Pfam PF02613 Nitrate reductase delta subunit 51 171 2.9E-27 T 13-10-2018 IPR020945 DMSO/Nitrate reductase chaperone RPIT_12550 0a7ddf7b28db582f1a9f83eefbfcde98 485 SMART SM00632 397 483 2.8E-10 T 13-10-2018 IPR031319 Alpha-amylase, C-terminal domain Reactome: R-HSA-189085 RPIT_12550 0a7ddf7b28db582f1a9f83eefbfcde98 485 SUPERFAMILY SSF51011 396 482 2.09E-13 T 13-10-2018 RPIT_12550 0a7ddf7b28db582f1a9f83eefbfcde98 485 Gene3D G3DSA:3.20.20.80 41 393 6.2E-118 T 13-10-2018 RPIT_12550 0a7ddf7b28db582f1a9f83eefbfcde98 485 PRINTS PR00110 Alpha-amylase signature 85 102 5.8E-22 T 13-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 RPIT_12550 0a7ddf7b28db582f1a9f83eefbfcde98 485 PRINTS PR00110 Alpha-amylase signature 210 221 5.8E-22 T 13-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 RPIT_12550 0a7ddf7b28db582f1a9f83eefbfcde98 485 PRINTS PR00110 Alpha-amylase signature 117 128 5.8E-22 T 13-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 RPIT_12550 0a7ddf7b28db582f1a9f83eefbfcde98 485 PRINTS PR00110 Alpha-amylase signature 294 306 5.8E-22 T 13-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 RPIT_12550 0a7ddf7b28db582f1a9f83eefbfcde98 485 PRINTS PR00110 Alpha-amylase signature 238 256 5.8E-22 T 13-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 RPIT_12550 0a7ddf7b28db582f1a9f83eefbfcde98 485 Gene3D G3DSA:2.60.40.1180 395 483 3.6E-14 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta RPIT_12550 0a7ddf7b28db582f1a9f83eefbfcde98 485 Pfam PF00128 Alpha amylase, catalytic domain 94 340 7.3E-19 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_12550 0a7ddf7b28db582f1a9f83eefbfcde98 485 SMART SM00642 42 391 1.4E-60 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_12550 0a7ddf7b28db582f1a9f83eefbfcde98 485 SUPERFAMILY SSF51445 39 379 2.24E-75 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_09620 5dd1aa527325aacca64500f0adf7ecb4 327 Pfam PF13641 Glycosyltransferase like family 2 3 221 1.6E-20 T 13-10-2018 RPIT_09620 5dd1aa527325aacca64500f0adf7ecb4 327 Gene3D G3DSA:3.90.550.10 1 220 1.6E-34 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_09620 5dd1aa527325aacca64500f0adf7ecb4 327 SUPERFAMILY SSF53448 1 252 7.59E-44 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_04695 364abfb778fdc953991260ac47bdf016 222 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 20 83 7.7E-10 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIT_04695 364abfb778fdc953991260ac47bdf016 222 Pfam PF01467 Cytidylyltransferase-like 21 185 5.6E-28 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIT_04695 364abfb778fdc953991260ac47bdf016 222 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 17 211 29.092 T 13-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 RPIT_04695 364abfb778fdc953991260ac47bdf016 222 SUPERFAMILY SSF52374 16 210 1.28E-48 T 13-10-2018 RPIT_04695 364abfb778fdc953991260ac47bdf016 222 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 21 210 2.5E-53 T 13-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 RPIT_04695 364abfb778fdc953991260ac47bdf016 222 Gene3D G3DSA:3.40.50.620 16 217 4.8E-58 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_12440 adcf92cf079cd9833baae2404a612203 91 Gene3D G3DSA:3.40.250.10 1 90 7.4E-29 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_12440 adcf92cf079cd9833baae2404a612203 91 ProSitePatterns PS00380 Rhodanese signature 1. 17 28 - T 13-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 RPIT_12440 adcf92cf079cd9833baae2404a612203 91 Pfam PF00581 Rhodanese-like domain 2 85 6.8E-17 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_12440 adcf92cf079cd9833baae2404a612203 91 SMART SM00450 1 88 7.6E-18 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_12440 adcf92cf079cd9833baae2404a612203 91 SUPERFAMILY SSF52821 3 90 1.44E-28 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_10805 fb7830b847e95c1db493b7d5a5fa8931 332 Pfam PF14249 Tocopherol cyclase 139 320 1.8E-18 T 13-10-2018 IPR025893 Tocopherol cyclase GO:0009976 RPIT_10805 fb7830b847e95c1db493b7d5a5fa8931 332 SUPERFAMILY SSF159245 92 275 2.48E-6 T 13-10-2018 RPIT_12420 243ae491a4e9c2bff74f109d59b80d72 554 SUPERFAMILY SSF53850 68 550 3.08E-92 T 13-10-2018 RPIT_12420 243ae491a4e9c2bff74f109d59b80d72 554 Gene3D G3DSA:3.40.190.10 231 530 1.7E-85 T 13-10-2018 RPIT_12420 243ae491a4e9c2bff74f109d59b80d72 554 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 119 466 4.0E-66 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain RPIT_12420 243ae491a4e9c2bff74f109d59b80d72 554 Gene3D G3DSA:3.90.76.10 87 230 1.7E-85 T 13-10-2018 RPIT_12420 243ae491a4e9c2bff74f109d59b80d72 554 PIRSF PIRSF002741 37 537 9.1E-63 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RPIT_12420 243ae491a4e9c2bff74f109d59b80d72 554 Gene3D G3DSA:3.10.105.10 307 526 1.7E-85 T 13-10-2018 RPIT_09615 b651bce66d2b31edbc2bb28d417a72f4 215 SUPERFAMILY SSF56801 5 208 4.81E-6 T 13-10-2018 RPIT_09985 576d35d858f0714477f8b0f8a4793f0c 207 SUPERFAMILY SSF51261 31 168 9.42E-15 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_09985 576d35d858f0714477f8b0f8a4793f0c 207 Pfam PF01551 Peptidase family M23 99 171 4.2E-12 T 13-10-2018 IPR016047 Peptidase M23 RPIT_09985 576d35d858f0714477f8b0f8a4793f0c 207 Gene3D G3DSA:2.70.70.10 13 180 2.2E-19 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_04610 a0b98edc9e224056ffc2afdabb711f6b 287 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 26 178 5.4E-48 T 13-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 RPIT_04610 a0b98edc9e224056ffc2afdabb711f6b 287 Pfam PF09142 tRNA Pseudouridine synthase II, C terminal 232 286 1.7E-14 T 13-10-2018 IPR015225 tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIT_04610 a0b98edc9e224056ffc2afdabb711f6b 287 SUPERFAMILY SSF88697 232 286 4.67E-8 T 13-10-2018 IPR015947 PUA-like superfamily RPIT_04610 a0b98edc9e224056ffc2afdabb711f6b 287 SUPERFAMILY SSF55120 5 219 1.34E-70 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIT_04610 a0b98edc9e224056ffc2afdabb711f6b 287 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 4 286 17.265 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIT_04610 a0b98edc9e224056ffc2afdabb711f6b 287 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 5 214 5.9E-67 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIT_04610 a0b98edc9e224056ffc2afdabb711f6b 287 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 179 215 9.8E-10 T 13-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 RPIT_04610 a0b98edc9e224056ffc2afdabb711f6b 287 Gene3D G3DSA:3.30.2350.10 1 243 1.4E-83 T 13-10-2018 RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 Pfam PF01168 Alanine racemase, N-terminal domain 9 230 3.7E-59 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 PRINTS PR00992 Alanine racemase signature 354 367 1.6E-56 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 PRINTS PR00992 Alanine racemase signature 203 230 1.6E-56 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 PRINTS PR00992 Alanine racemase signature 27 43 1.6E-56 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 PRINTS PR00992 Alanine racemase signature 125 137 1.6E-56 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 PRINTS PR00992 Alanine racemase signature 159 170 1.6E-56 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 PRINTS PR00992 Alanine racemase signature 259 274 1.6E-56 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 PRINTS PR00992 Alanine racemase signature 276 291 1.6E-56 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 PRINTS PR00992 Alanine racemase signature 64 82 1.6E-56 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 PRINTS PR00992 Alanine racemase signature 297 314 1.6E-56 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 Gene3D G3DSA:3.20.20.10 11 233 4.5E-120 T 13-10-2018 IPR029066 PLP-binding barrel RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 Pfam PF00842 Alanine racemase, C-terminal domain 243 371 2.9E-46 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 TIGRFAM TIGR00492 alr: alanine racemase 5 371 1.3E-93 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 SUPERFAMILY SSF51419 9 234 5.07E-56 T 13-10-2018 IPR029066 PLP-binding barrel RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 Gene3D G3DSA:2.40.37.10 7 371 4.5E-120 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 13-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 SUPERFAMILY SSF50621 236 371 1.08E-48 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 Hamap MF_01201 Alanine racemase. 2 371 29.991 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_00370 ccda22253d59c59bf00bce2c1aea320c 371 SMART SM01005 243 371 8.6E-62 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_12375 fa0f3c4356db8dac3454d0408150817a 268 SMART SM01117 194 268 1.0E-13 T 13-10-2018 IPR001199 Cytochrome b5-like heme/steroid binding domain RPIT_12375 fa0f3c4356db8dac3454d0408150817a 268 Gene3D G3DSA:3.10.120.10 187 268 3.7E-19 T 13-10-2018 IPR036400 Cytochrome b5-like heme/steroid binding domain superfamily RPIT_12375 fa0f3c4356db8dac3454d0408150817a 268 Pfam PF00173 Cytochrome b5-like Heme/Steroid binding domain 197 265 2.5E-15 T 13-10-2018 IPR001199 Cytochrome b5-like heme/steroid binding domain RPIT_12375 fa0f3c4356db8dac3454d0408150817a 268 SUPERFAMILY SSF55856 191 251 3.27E-19 T 13-10-2018 IPR036400 Cytochrome b5-like heme/steroid binding domain superfamily RPIT_08260 cc5a09149b209bac046f3cef07a201bb 369 Pfam PF01409 tRNA synthetases class II core domain (F) 109 363 7.3E-92 T 13-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 RPIT_08260 cc5a09149b209bac046f3cef07a201bb 369 Gene3D G3DSA:3.30.930.10 25 364 1.1E-99 T 13-10-2018 RPIT_08260 cc5a09149b209bac046f3cef07a201bb 369 SUPERFAMILY SSF46589 29 115 6.28E-13 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 RPIT_08260 cc5a09149b209bac046f3cef07a201bb 369 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 37 104 6.0E-15 T 13-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RPIT_08260 cc5a09149b209bac046f3cef07a201bb 369 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 68 362 8.1E-80 T 13-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 RPIT_08260 cc5a09149b209bac046f3cef07a201bb 369 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 25 364 42.912 T 13-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 RPIT_08260 cc5a09149b209bac046f3cef07a201bb 369 SUPERFAMILY SSF55681 109 362 3.8E-74 T 13-10-2018 RPIT_09705 027d0d795205fe1417d946a16875ca1f 265 Gene3D G3DSA:3.40.50.1580 1 263 1.5E-86 T 13-10-2018 RPIT_09705 027d0d795205fe1417d946a16875ca1f 265 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 26 262 1.0E-69 T 13-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 RPIT_09705 027d0d795205fe1417d946a16875ca1f 265 PIRSF PIRSF000477 1 265 1.7E-80 T 13-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 RPIT_09705 027d0d795205fe1417d946a16875ca1f 265 TIGRFAM TIGR01698 PUNP: purine nucleotide phosphorylase 25 262 3.8E-95 T 13-10-2018 IPR011269 Putative purine nucleotide phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 RPIT_09705 027d0d795205fe1417d946a16875ca1f 265 SUPERFAMILY SSF53167 6 263 1.95E-75 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 RPIT_09705 027d0d795205fe1417d946a16875ca1f 265 Pfam PF01048 Phosphorylase superfamily 26 262 1.9E-36 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RPIT_11990 697cb19dda75aaa7dce313ea67041a54 393 Gene3D G3DSA:1.10.10.10 4 79 3.6E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_11990 697cb19dda75aaa7dce313ea67041a54 393 Gene3D G3DSA:3.30.420.40 209 354 6.8E-31 T 13-10-2018 RPIT_11990 697cb19dda75aaa7dce313ea67041a54 393 SUPERFAMILY SSF53067 85 377 5.19E-38 T 13-10-2018 RPIT_11990 697cb19dda75aaa7dce313ea67041a54 393 Pfam PF12802 MarR family 19 71 1.3E-10 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_11990 697cb19dda75aaa7dce313ea67041a54 393 Gene3D G3DSA:3.30.420.40 83 208 5.7E-21 T 13-10-2018 RPIT_11990 697cb19dda75aaa7dce313ea67041a54 393 Pfam PF00480 ROK family 86 373 3.0E-33 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RPIT_11990 697cb19dda75aaa7dce313ea67041a54 393 SUPERFAMILY SSF46785 14 72 3.46E-12 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_09245 533d26e3d4d71a45c2f09559d7e254b1 463 Pfam PF13701 Transposase DDE domain group 1 10 460 8.4E-76 T 13-10-2018 IPR025668 Transposase DDE domain RPIT_14030 533d26e3d4d71a45c2f09559d7e254b1 463 Pfam PF13701 Transposase DDE domain group 1 10 460 8.4E-76 T 13-10-2018 IPR025668 Transposase DDE domain RPIT_09260 533d26e3d4d71a45c2f09559d7e254b1 463 Pfam PF13701 Transposase DDE domain group 1 10 460 8.4E-76 T 13-10-2018 IPR025668 Transposase DDE domain RPIT_08820 f684434d4e17cda137de95e9e554e111 463 Hamap MF_00303 Trigger factor [tig]. 1 429 17.744 T 13-10-2018 IPR005215 Trigger factor GO:0015031 RPIT_08820 f684434d4e17cda137de95e9e554e111 463 SUPERFAMILY SSF109998 246 437 7.32E-31 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily RPIT_08820 f684434d4e17cda137de95e9e554e111 463 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 216 2.5E-4 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain RPIT_08820 f684434d4e17cda137de95e9e554e111 463 TIGRFAM TIGR00115 tig: trigger factor 12 422 8.0E-108 T 13-10-2018 IPR005215 Trigger factor GO:0015031 RPIT_08820 f684434d4e17cda137de95e9e554e111 463 SUPERFAMILY SSF102735 4 128 2.09E-36 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 RPIT_08820 f684434d4e17cda137de95e9e554e111 463 SUPERFAMILY SSF54534 135 244 5.89E-15 T 13-10-2018 RPIT_08820 f684434d4e17cda137de95e9e554e111 463 PIRSF PIRSF003095 1 441 1.6E-101 T 13-10-2018 IPR005215 Trigger factor GO:0015031 RPIT_08820 f684434d4e17cda137de95e9e554e111 463 Gene3D G3DSA:3.30.70.1050 1 116 8.4E-34 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 RPIT_08820 f684434d4e17cda137de95e9e554e111 463 Pfam PF05697 Bacterial trigger factor protein (TF) 4 143 5.5E-39 T 13-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RPIT_08820 f684434d4e17cda137de95e9e554e111 463 Gene3D G3DSA:1.10.3120.10 117 428 1.4E-54 T 13-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 RPIT_08820 f684434d4e17cda137de95e9e554e111 463 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 259 423 1.0E-20 T 13-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RPIT_08820 f684434d4e17cda137de95e9e554e111 463 Gene3D G3DSA:3.10.50.40 151 244 1.4E-54 T 13-10-2018 RPIT_08765 c50b7d98c91bfa744342e50627f251bf 135 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 2 134 29.816 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIT_08765 c50b7d98c91bfa744342e50627f251bf 135 Gene3D G3DSA:3.30.70.141 1 135 8.0E-53 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIT_08765 c50b7d98c91bfa744342e50627f251bf 135 SUPERFAMILY SSF54919 1 133 2.88E-50 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIT_08765 c50b7d98c91bfa744342e50627f251bf 135 PRINTS PR01243 Nucleoside diphosphate kinase signature 5 27 6.8E-41 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIT_08765 c50b7d98c91bfa744342e50627f251bf 135 PRINTS PR01243 Nucleoside diphosphate kinase signature 49 68 6.8E-41 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIT_08765 c50b7d98c91bfa744342e50627f251bf 135 PRINTS PR01243 Nucleoside diphosphate kinase signature 69 86 6.8E-41 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIT_08765 c50b7d98c91bfa744342e50627f251bf 135 PRINTS PR01243 Nucleoside diphosphate kinase signature 90 106 6.8E-41 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIT_08765 c50b7d98c91bfa744342e50627f251bf 135 PRINTS PR01243 Nucleoside diphosphate kinase signature 113 132 6.8E-41 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIT_08765 c50b7d98c91bfa744342e50627f251bf 135 Pfam PF00334 Nucleoside diphosphate kinase 3 134 3.1E-48 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIT_08765 c50b7d98c91bfa744342e50627f251bf 135 SMART SM00562 2 135 1.7E-59 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIT_10335 894dee94c5e00edd4700d5f290848fc7 270 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 84 245 2.0E-70 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 RPIT_10335 894dee94c5e00edd4700d5f290848fc7 270 Pfam PF06426 Serine acetyltransferase, N-terminal 12 116 4.5E-38 T 13-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 RPIT_10335 894dee94c5e00edd4700d5f290848fc7 270 Gene3D G3DSA:1.10.3130.10 3 145 7.1E-53 T 13-10-2018 RPIT_10335 894dee94c5e00edd4700d5f290848fc7 270 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 205 233 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RPIT_10335 894dee94c5e00edd4700d5f290848fc7 270 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 196 230 8.3E-10 T 13-10-2018 IPR001451 Hexapeptide repeat RPIT_10335 894dee94c5e00edd4700d5f290848fc7 270 PIRSF PIRSF000441 78 265 1.5E-57 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 RPIT_10335 894dee94c5e00edd4700d5f290848fc7 270 SMART SM00971 12 116 5.1E-49 T 13-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 RPIT_10335 894dee94c5e00edd4700d5f290848fc7 270 Gene3D G3DSA:2.160.10.10 146 264 1.4E-37 T 13-10-2018 RPIT_10335 894dee94c5e00edd4700d5f290848fc7 270 SUPERFAMILY SSF51161 10 247 2.04E-61 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily RPIT_01325 f0dda9d95afbb75de8de648fe7ac2eeb 1377 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 973 1128 1.0E-23 T 13-10-2018 RPIT_01325 f0dda9d95afbb75de8de648fe7ac2eeb 1377 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 80 250 5.8E-17 T 13-10-2018 RPIT_01325 f0dda9d95afbb75de8de648fe7ac2eeb 1377 Gene3D G3DSA:2.60.120.200 39 254 1.0E-24 T 13-10-2018 RPIT_01325 f0dda9d95afbb75de8de648fe7ac2eeb 1377 Pfam PF04616 Glycosyl hydrolases family 43 489 696 7.9E-9 T 13-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 RPIT_01325 f0dda9d95afbb75de8de648fe7ac2eeb 1377 Gene3D G3DSA:2.115.10.20 473 761 8.3E-28 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RPIT_01325 f0dda9d95afbb75de8de648fe7ac2eeb 1377 Pfam PF07532 Bacterial Ig-like domain (group 4) 760 815 8.4E-12 T 13-10-2018 IPR011081 Bacterial Ig-related RPIT_01325 f0dda9d95afbb75de8de648fe7ac2eeb 1377 SMART SM00635 835 912 2.3E-8 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 RPIT_01325 f0dda9d95afbb75de8de648fe7ac2eeb 1377 Gene3D G3DSA:2.60.40.1080 832 919 7.0E-15 T 13-10-2018 RPIT_01325 f0dda9d95afbb75de8de648fe7ac2eeb 1377 SUPERFAMILY SSF49899 916 1131 9.62E-33 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RPIT_01325 f0dda9d95afbb75de8de648fe7ac2eeb 1377 SUPERFAMILY SSF75005 488 755 5.37E-31 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RPIT_01325 f0dda9d95afbb75de8de648fe7ac2eeb 1377 Pfam PF02368 Bacterial Ig-like domain (group 2) 837 901 7.0E-13 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 RPIT_01325 f0dda9d95afbb75de8de648fe7ac2eeb 1377 SMART SM00560 98 248 0.013 T 13-10-2018 IPR006558 LamG-like jellyroll fold RPIT_01325 f0dda9d95afbb75de8de648fe7ac2eeb 1377 SMART SM00560 986 1125 0.0056 T 13-10-2018 IPR006558 LamG-like jellyroll fold RPIT_01325 f0dda9d95afbb75de8de648fe7ac2eeb 1377 SUPERFAMILY SSF49373 836 906 1.61E-11 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments RPIT_01325 f0dda9d95afbb75de8de648fe7ac2eeb 1377 Gene3D G3DSA:2.60.120.200 922 1134 7.9E-32 T 13-10-2018 RPIT_01325 f0dda9d95afbb75de8de648fe7ac2eeb 1377 SUPERFAMILY SSF49899 31 253 2.5E-24 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RPIT_10895 f6aa265786819b050deebd48c51df5c1 493 SUPERFAMILY SSF51905 2 308 1.05E-35 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_10895 f6aa265786819b050deebd48c51df5c1 493 Gene3D G3DSA:3.50.50.60 104 246 1.5E-74 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_10895 f6aa265786819b050deebd48c51df5c1 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.5E-15 T 13-10-2018 RPIT_10895 f6aa265786819b050deebd48c51df5c1 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 1.5E-15 T 13-10-2018 RPIT_10895 f6aa265786819b050deebd48c51df5c1 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.5E-15 T 13-10-2018 RPIT_10895 f6aa265786819b050deebd48c51df5c1 493 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.5E-15 T 13-10-2018 RPIT_10895 f6aa265786819b050deebd48c51df5c1 493 Gene3D G3DSA:1.10.10.1100 428 480 4.5E-11 T 13-10-2018 RPIT_10895 f6aa265786819b050deebd48c51df5c1 493 Pfam PF04324 BFD-like [2Fe-2S] binding domain 428 474 1.3E-11 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain RPIT_10895 f6aa265786819b050deebd48c51df5c1 493 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 284 2.7E-51 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIT_10895 f6aa265786819b050deebd48c51df5c1 493 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 7.4E-21 T 13-10-2018 RPIT_10895 f6aa265786819b050deebd48c51df5c1 493 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 96 114 7.4E-21 T 13-10-2018 RPIT_10895 f6aa265786819b050deebd48c51df5c1 493 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 7.4E-21 T 13-10-2018 RPIT_10895 f6aa265786819b050deebd48c51df5c1 493 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 7.4E-21 T 13-10-2018 RPIT_10895 f6aa265786819b050deebd48c51df5c1 493 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 7.4E-21 T 13-10-2018 RPIT_10895 f6aa265786819b050deebd48c51df5c1 493 Gene3D G3DSA:3.50.50.60 6 281 1.5E-74 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_09475 89fa8d38b82ad1865ff6ff7f34595a2a 445 SUPERFAMILY SSF56672 3 236 4.98E-72 T 13-10-2018 RPIT_09475 89fa8d38b82ad1865ff6ff7f34595a2a 445 Gene3D G3DSA:3.30.1490.100 243 349 1.1E-24 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RPIT_09475 89fa8d38b82ad1865ff6ff7f34595a2a 445 Pfam PF11799 impB/mucB/samB family C-terminal domain 236 346 5.3E-20 T 13-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RPIT_09475 89fa8d38b82ad1865ff6ff7f34595a2a 445 Pfam PF11798 IMS family HHH motif 167 197 2.2E-6 T 13-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 RPIT_09475 89fa8d38b82ad1865ff6ff7f34595a2a 445 Gene3D G3DSA:3.30.70.270 5 164 3.4E-50 T 13-10-2018 RPIT_09475 89fa8d38b82ad1865ff6ff7f34595a2a 445 SUPERFAMILY SSF100879 240 340 2.94E-24 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RPIT_09475 89fa8d38b82ad1865ff6ff7f34595a2a 445 Pfam PF00817 impB/mucB/samB family 8 155 1.3E-38 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RPIT_09475 89fa8d38b82ad1865ff6ff7f34595a2a 445 Hamap MF_01113 DNA polymerase IV [dinB]. 2 351 34.214 T 13-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 RPIT_09475 89fa8d38b82ad1865ff6ff7f34595a2a 445 Gene3D G3DSA:1.10.150.20 169 238 9.7E-20 T 13-10-2018 RPIT_09475 89fa8d38b82ad1865ff6ff7f34595a2a 445 Gene3D G3DSA:2.30.40.20 22 73 3.4E-50 T 13-10-2018 RPIT_08965 9d8fc17b1f795fa5bf942119206dc23d 266 SMART SM00898 2 108 2.9E-15 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RPIT_08965 9d8fc17b1f795fa5bf942119206dc23d 266 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 6 100 4.0E-7 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RPIT_08965 9d8fc17b1f795fa5bf942119206dc23d 266 SUPERFAMILY SSF57716 216 260 3.42E-9 T 13-10-2018 RPIT_08965 9d8fc17b1f795fa5bf942119206dc23d 266 Gene3D G3DSA:1.10.8.50 123 260 5.6E-29 T 13-10-2018 RPIT_08965 9d8fc17b1f795fa5bf942119206dc23d 266 SUPERFAMILY SSF46946 122 189 1.47E-15 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RPIT_08965 9d8fc17b1f795fa5bf942119206dc23d 266 Gene3D G3DSA:3.20.190.10 2 122 1.7E-18 T 13-10-2018 IPR035937 MutM-like, N-terminal RPIT_08965 9d8fc17b1f795fa5bf942119206dc23d 266 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 122 185 2.5E-10 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RPIT_08965 9d8fc17b1f795fa5bf942119206dc23d 266 SUPERFAMILY SSF81624 2 131 2.09E-21 T 13-10-2018 IPR035937 MutM-like, N-terminal RPIT_08965 9d8fc17b1f795fa5bf942119206dc23d 266 SMART SM01232 122 212 1.5E-20 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RPIT_08950 195ee73227482c8b6aafb3d23695d064 421 Gene3D G3DSA:2.30.40.10 16 416 1.3E-122 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 RPIT_08950 195ee73227482c8b6aafb3d23695d064 421 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 29 418 4.9E-115 T 13-10-2018 RPIT_08950 195ee73227482c8b6aafb3d23695d064 421 Gene3D G3DSA:3.20.20.140 48 364 1.3E-122 T 13-10-2018 RPIT_08950 195ee73227482c8b6aafb3d23695d064 421 Pfam PF01979 Amidohydrolase family 43 416 7.5E-16 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 RPIT_08950 195ee73227482c8b6aafb3d23695d064 421 ProSitePatterns PS00482 Dihydroorotase signature 1. 50 58 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_08950 195ee73227482c8b6aafb3d23695d064 421 SUPERFAMILY SSF51338 10 420 4.32E-15 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 RPIT_08950 195ee73227482c8b6aafb3d23695d064 421 ProSitePatterns PS00483 Dihydroorotase signature 2. 298 309 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_08950 195ee73227482c8b6aafb3d23695d064 421 Hamap MF_00220_B Dihydroorotase [pyrC]. 1 421 39.561 T 13-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_08950 195ee73227482c8b6aafb3d23695d064 421 SUPERFAMILY SSF51556 47 362 3.19E-95 T 13-10-2018 IPR032466 Metal-dependent hydrolase RPIT_04295 3044f4d211bcb7914cb4e949aa497ea8 805 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 283 729 1.3E-64 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_04295 3044f4d211bcb7914cb4e949aa497ea8 805 SUPERFAMILY SSF81442 277 752 4.06E-76 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_04295 3044f4d211bcb7914cb4e949aa497ea8 805 Gene3D G3DSA:1.20.210.10 221 757 1.1E-164 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_07020 358b3dfc85d51f50eda3df0a4d06937b 943 SUPERFAMILY SSF51998 157 702 1.28E-130 T 13-10-2018 RPIT_07020 358b3dfc85d51f50eda3df0a4d06937b 943 Pfam PF02867 Ribonucleotide reductase, barrel domain 157 691 4.2E-143 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RPIT_07020 358b3dfc85d51f50eda3df0a4d06937b 943 PRINTS PR01183 Ribonucleotide reductase large chain signature 537 564 2.0E-12 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RPIT_07020 358b3dfc85d51f50eda3df0a4d06937b 943 PRINTS PR01183 Ribonucleotide reductase large chain signature 232 251 2.0E-12 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RPIT_07020 358b3dfc85d51f50eda3df0a4d06937b 943 PRINTS PR01183 Ribonucleotide reductase large chain signature 359 370 2.0E-12 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RPIT_07020 358b3dfc85d51f50eda3df0a4d06937b 943 PRINTS PR01183 Ribonucleotide reductase large chain signature 431 453 2.0E-12 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RPIT_07020 358b3dfc85d51f50eda3df0a4d06937b 943 PRINTS PR01183 Ribonucleotide reductase large chain signature 393 416 2.0E-12 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RPIT_07020 358b3dfc85d51f50eda3df0a4d06937b 943 Gene3D G3DSA:3.20.70.20 59 707 1.5E-196 T 13-10-2018 RPIT_07020 358b3dfc85d51f50eda3df0a4d06937b 943 Pfam PF08471 Class II vitamin B12-dependent ribonucleotide reductase 53 136 1.3E-20 T 13-10-2018 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain GO:0004748|GO:0050897|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIT_07020 358b3dfc85d51f50eda3df0a4d06937b 943 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 91 701 3.2E-183 T 13-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIT_12225 a2776d4a6bedbd49c65a21e58b3b6f96 548 Pfam PF05872 Bacterial protein of unknown function (DUF853) 33 547 1.1E-190 T 13-10-2018 IPR033186 Helicase HerA-like C-terminal RPIT_12225 a2776d4a6bedbd49c65a21e58b3b6f96 548 Gene3D G3DSA:3.40.50.300 18 105 3.0E-11 T 13-10-2018 RPIT_12225 a2776d4a6bedbd49c65a21e58b3b6f96 548 SUPERFAMILY SSF52540 31 391 2.1E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_12225 a2776d4a6bedbd49c65a21e58b3b6f96 548 Gene3D G3DSA:3.40.50.300 201 403 2.0E-21 T 13-10-2018 RPIT_13285 dda44b34b854eac1cb99ca2d34d3fb48 500 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_13285 dda44b34b854eac1cb99ca2d34d3fb48 500 Pfam PF00005 ABC transporter 25 174 2.4E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_13285 dda44b34b854eac1cb99ca2d34d3fb48 500 SUPERFAMILY SSF52540 7 235 3.35E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_13285 dda44b34b854eac1cb99ca2d34d3fb48 500 SUPERFAMILY SSF52540 271 479 4.78E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_13285 dda44b34b854eac1cb99ca2d34d3fb48 500 Pfam PF00005 ABC transporter 273 426 1.5E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_13285 dda44b34b854eac1cb99ca2d34d3fb48 500 SMART SM00382 33 222 1.4E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_13285 dda44b34b854eac1cb99ca2d34d3fb48 500 SMART SM00382 281 486 6.1E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_13285 dda44b34b854eac1cb99ca2d34d3fb48 500 Gene3D G3DSA:3.40.50.300 265 497 4.9E-43 T 13-10-2018 RPIT_13285 dda44b34b854eac1cb99ca2d34d3fb48 500 Gene3D G3DSA:3.40.50.300 7 244 1.3E-57 T 13-10-2018 RPIT_12075 2afaa99024e63fb5d2a07d1d31e97529 1146 Pfam PF13809 Tubulin like 8 373 4.1E-44 T 13-10-2018 IPR025904 Tubulin-like RPIT_10865 a9dd946f9f5a6badf3f18b7c81e16610 1116 Pfam PF13643 Domain of unknown function (DUF4145) 20 107 2.8E-10 T 13-10-2018 IPR025285 Domain of unknown function DUF4145 RPIT_10865 a9dd946f9f5a6badf3f18b7c81e16610 1116 Pfam PF08463 EcoEI R protein C-terminal 960 1104 1.8E-16 T 13-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 RPIT_10865 a9dd946f9f5a6badf3f18b7c81e16610 1116 Pfam PF00271 Helicase conserved C-terminal domain 617 715 1.2E-8 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_10865 a9dd946f9f5a6badf3f18b7c81e16610 1116 SUPERFAMILY SSF52540 368 717 5.47E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10865 a9dd946f9f5a6badf3f18b7c81e16610 1116 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 207 308 5.5E-6 T 13-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain RPIT_10865 a9dd946f9f5a6badf3f18b7c81e16610 1116 Gene3D G3DSA:3.40.50.300 526 752 2.0E-57 T 13-10-2018 RPIT_10865 a9dd946f9f5a6badf3f18b7c81e16610 1116 Gene3D G3DSA:3.40.50.300 333 518 3.5E-51 T 13-10-2018 RPIT_10865 a9dd946f9f5a6badf3f18b7c81e16610 1116 Pfam PF04851 Type III restriction enzyme, res subunit 351 504 3.9E-33 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RPIT_10865 a9dd946f9f5a6badf3f18b7c81e16610 1116 SMART SM00487 347 531 8.5E-20 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIT_10865 a9dd946f9f5a6badf3f18b7c81e16610 1116 Gene3D G3DSA:3.90.1570.30 185 332 1.1E-29 T 13-10-2018 RPIT_09775 e587cc410a20dcabc4f2653741f9416b 418 Pfam PF02653 Branched-chain amino acid transport system / permease component 105 387 3.3E-43 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 RPIT_10705 f2aaf0cf0a28d3728f67628da22d3c7d 426 SMART SM01192 139 423 9.7E-218 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIT_10705 f2aaf0cf0a28d3728f67628da22d3c7d 426 PRINTS PR00148 Enolase signature 361 378 1.9E-45 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIT_10705 f2aaf0cf0a28d3728f67628da22d3c7d 426 PRINTS PR00148 Enolase signature 37 51 1.9E-45 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIT_10705 f2aaf0cf0a28d3728f67628da22d3c7d 426 PRINTS PR00148 Enolase signature 332 346 1.9E-45 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIT_10705 f2aaf0cf0a28d3728f67628da22d3c7d 426 PRINTS PR00148 Enolase signature 161 174 1.9E-45 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIT_10705 f2aaf0cf0a28d3728f67628da22d3c7d 426 PRINTS PR00148 Enolase signature 309 320 1.9E-45 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIT_10705 f2aaf0cf0a28d3728f67628da22d3c7d 426 PRINTS PR00148 Enolase signature 107 123 1.9E-45 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIT_10705 f2aaf0cf0a28d3728f67628da22d3c7d 426 ProSitePatterns PS00164 Enolase signature. 332 345 - T 13-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RPIT_10705 f2aaf0cf0a28d3728f67628da22d3c7d 426 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 420 5.2E-130 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIT_10705 f2aaf0cf0a28d3728f67628da22d3c7d 426 SUPERFAMILY SSF54826 3 138 2.19E-52 T 13-10-2018 RPIT_10705 f2aaf0cf0a28d3728f67628da22d3c7d 426 Hamap MF_00318 Enolase [eno]. 2 409 44.876 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIT_10705 f2aaf0cf0a28d3728f67628da22d3c7d 426 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 423 8.9E-204 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIT_10705 f2aaf0cf0a28d3728f67628da22d3c7d 426 Gene3D G3DSA:3.20.20.120 128 424 9.8E-137 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily RPIT_10705 f2aaf0cf0a28d3728f67628da22d3c7d 426 Gene3D G3DSA:3.30.390.10 1 127 1.3E-52 T 13-10-2018 IPR029017 Enolase-like, N-terminal RPIT_10705 f2aaf0cf0a28d3728f67628da22d3c7d 426 Pfam PF03952 Enolase, N-terminal domain 4 134 6.2E-57 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIT_10705 f2aaf0cf0a28d3728f67628da22d3c7d 426 SUPERFAMILY SSF51604 138 422 4.53E-128 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily RPIT_10705 f2aaf0cf0a28d3728f67628da22d3c7d 426 SMART SM01193 4 134 5.7E-90 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIT_10705 f2aaf0cf0a28d3728f67628da22d3c7d 426 PIRSF PIRSF001400 1 422 1.1E-189 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIT_03645 5ca8cb6292127e32c0cc63a97f58c96b 132 Pfam PF12270 Cytochrome c oxidase subunit IV 1 130 3.2E-43 T 13-10-2018 IPR021050 Cytochrome c oxidase subunit IV, actinobacteria GO:0004129|GO:0016021|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 RPIT_03645 5ca8cb6292127e32c0cc63a97f58c96b 132 PIRSF PIRSF017385 1 132 3.1E-46 T 13-10-2018 IPR021050 Cytochrome c oxidase subunit IV, actinobacteria GO:0004129|GO:0016021|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 RPIT_10160 cc9bf14bf1fb80bd2bbe87fd3430d177 217 Gene3D G3DSA:3.40.50.150 13 217 7.2E-47 T 13-10-2018 RPIT_10160 cc9bf14bf1fb80bd2bbe87fd3430d177 217 SUPERFAMILY SSF53335 39 216 6.79E-24 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_10160 cc9bf14bf1fb80bd2bbe87fd3430d177 217 Pfam PF01596 O-methyltransferase 49 215 5.6E-24 T 13-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 RPIT_06215 5214cf1e9d4eaa23b418e008a6be24e1 398 Hamap MF_00300 Chorismate synthase [aroC]. 2 374 33.342 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RPIT_06215 5214cf1e9d4eaa23b418e008a6be24e1 398 PIRSF PIRSF001456 1 385 3.1E-120 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RPIT_06215 5214cf1e9d4eaa23b418e008a6be24e1 398 ProSitePatterns PS00787 Chorismate synthase signature 1. 8 23 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RPIT_06215 5214cf1e9d4eaa23b418e008a6be24e1 398 Gene3D G3DSA:3.60.150.10 1 397 1.0E-151 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RPIT_06215 5214cf1e9d4eaa23b418e008a6be24e1 398 ProSitePatterns PS00788 Chorismate synthase signature 2. 134 150 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RPIT_06215 5214cf1e9d4eaa23b418e008a6be24e1 398 TIGRFAM TIGR00033 aroC: chorismate synthase 2 372 5.3E-123 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RPIT_06215 5214cf1e9d4eaa23b418e008a6be24e1 398 SUPERFAMILY SSF103263 1 389 1.07E-131 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RPIT_06215 5214cf1e9d4eaa23b418e008a6be24e1 398 Pfam PF01264 Chorismate synthase 2 367 1.3E-112 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RPIT_06215 5214cf1e9d4eaa23b418e008a6be24e1 398 ProSitePatterns PS00789 Chorismate synthase signature 3. 341 357 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RPIT_14845 049e7b3c2e62720a856bdc6fe35b3fda 281 Gene3D G3DSA:1.10.3720.10 46 279 5.5E-54 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_14845 049e7b3c2e62720a856bdc6fe35b3fda 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 268 1.2E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_14845 049e7b3c2e62720a856bdc6fe35b3fda 281 SUPERFAMILY SSF161098 50 268 3.79E-50 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_12365 b726672de6628b97b2e50af34ba9baf7 356 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 110 247 1.2E-40 T 13-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain RPIT_12365 b726672de6628b97b2e50af34ba9baf7 356 Gene3D G3DSA:1.10.260.150 81 351 1.4E-68 T 13-10-2018 RPIT_12365 b726672de6628b97b2e50af34ba9baf7 356 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 109 247 2.2E-39 T 13-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain RPIT_11315 811c090efb443430e37bc940b9e9c3a2 391 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 358 4.0E-21 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_11315 811c090efb443430e37bc940b9e9c3a2 391 PRINTS PR00344 Bacterial sensor protein C-terminal signature 305 319 4.0E-21 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_11315 811c090efb443430e37bc940b9e9c3a2 391 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 377 4.0E-21 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_11315 811c090efb443430e37bc940b9e9c3a2 391 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 333 4.0E-21 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_11315 811c090efb443430e37bc940b9e9c3a2 391 Gene3D G3DSA:1.10.287.130 145 222 1.2E-18 T 13-10-2018 RPIT_11315 811c090efb443430e37bc940b9e9c3a2 391 SMART SM00387 264 380 2.8E-38 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_11315 811c090efb443430e37bc940b9e9c3a2 391 SUPERFAMILY SSF55874 208 383 1.96E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_11315 811c090efb443430e37bc940b9e9c3a2 391 SUPERFAMILY SSF47384 145 219 1.16E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 RPIT_11315 811c090efb443430e37bc940b9e9c3a2 391 Gene3D G3DSA:3.30.565.10 224 383 4.0E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_11315 811c090efb443430e37bc940b9e9c3a2 391 SMART SM00388 153 219 4.2E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIT_11315 811c090efb443430e37bc940b9e9c3a2 391 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 265 378 9.3E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_11315 811c090efb443430e37bc940b9e9c3a2 391 Pfam PF00512 His Kinase A (phospho-acceptor) domain 154 218 4.9E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIT_14475 9e8976b44b44103bc6d49a1567fb057f 264 Gene3D G3DSA:3.20.20.150 1 262 2.3E-54 T 13-10-2018 RPIT_14475 9e8976b44b44103bc6d49a1567fb057f 264 SMART SM00518 4 264 9.7E-50 T 13-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 RPIT_14475 9e8976b44b44103bc6d49a1567fb057f 264 SUPERFAMILY SSF51658 5 261 8.64E-54 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily RPIT_14475 9e8976b44b44103bc6d49a1567fb057f 264 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 202 218 - T 13-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 RPIT_14475 9e8976b44b44103bc6d49a1567fb057f 264 Pfam PF01261 Xylose isomerase-like TIM barrel 15 224 2.9E-29 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain RPIT_14475 9e8976b44b44103bc6d49a1567fb057f 264 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 170 177 - T 13-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 RPIT_04740 8387d3697a793707962bcdf0d181a3f7 428 Gene3D G3DSA:3.90.1150.10 7 415 2.4E-159 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_04740 8387d3697a793707962bcdf0d181a3f7 428 SUPERFAMILY SSF53383 3 421 1.36E-112 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_04740 8387d3697a793707962bcdf0d181a3f7 428 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 5 421 9.8E-171 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 RPIT_04740 8387d3697a793707962bcdf0d181a3f7 428 Pfam PF00202 Aminotransferase class-III 32 418 3.3E-73 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIT_04740 8387d3697a793707962bcdf0d181a3f7 428 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 425 94.407 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 RPIT_04740 8387d3697a793707962bcdf0d181a3f7 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 271 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIT_04740 8387d3697a793707962bcdf0d181a3f7 428 Gene3D G3DSA:3.40.640.10 69 317 2.4E-159 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_07910 062cbce6981f98d92bef96d3523393f2 241 Gene3D G3DSA:1.10.10.10 1 70 3.0E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_07910 062cbce6981f98d92bef96d3523393f2 241 SUPERFAMILY SSF55781 62 234 1.7E-37 T 13-10-2018 RPIT_07910 062cbce6981f98d92bef96d3523393f2 241 SUPERFAMILY SSF46785 7 75 2.87E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_07910 062cbce6981f98d92bef96d3523393f2 241 Pfam PF01614 Bacterial transcriptional regulator 124 231 9.4E-18 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal RPIT_07910 062cbce6981f98d92bef96d3523393f2 241 Pfam PF09339 IclR helix-turn-helix domain 10 57 2.5E-10 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIT_07910 062cbce6981f98d92bef96d3523393f2 241 SMART SM00346 7 93 5.7E-21 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIT_07910 062cbce6981f98d92bef96d3523393f2 241 Gene3D G3DSA:3.30.450.40 71 237 3.8E-38 T 13-10-2018 IPR029016 GAF-like domain superfamily RPIT_03955 4278f7a3ccd2c3014f49edecfd8a049c 393 SUPERFAMILY SSF100879 242 339 4.12E-22 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RPIT_03955 4278f7a3ccd2c3014f49edecfd8a049c 393 SUPERFAMILY SSF56672 1 234 4.71E-80 T 13-10-2018 RPIT_03955 4278f7a3ccd2c3014f49edecfd8a049c 393 Pfam PF11799 impB/mucB/samB family C-terminal domain 238 347 3.3E-23 T 13-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RPIT_03955 4278f7a3ccd2c3014f49edecfd8a049c 393 Gene3D G3DSA:3.30.70.270 4 163 2.4E-56 T 13-10-2018 RPIT_03955 4278f7a3ccd2c3014f49edecfd8a049c 393 Gene3D G3DSA:3.30.1490.100 242 349 4.0E-23 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RPIT_03955 4278f7a3ccd2c3014f49edecfd8a049c 393 Hamap MF_01113 DNA polymerase IV [dinB]. 1 353 34.262 T 13-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 RPIT_03955 4278f7a3ccd2c3014f49edecfd8a049c 393 Pfam PF11798 IMS family HHH motif 165 196 1.9E-7 T 13-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 RPIT_03955 4278f7a3ccd2c3014f49edecfd8a049c 393 Pfam PF00817 impB/mucB/samB family 7 153 7.8E-47 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RPIT_03955 4278f7a3ccd2c3014f49edecfd8a049c 393 Gene3D G3DSA:1.10.150.20 167 235 2.9E-21 T 13-10-2018 RPIT_03955 4278f7a3ccd2c3014f49edecfd8a049c 393 Gene3D G3DSA:2.30.40.20 21 71 2.4E-56 T 13-10-2018 RPIT_11700 b37f6a65461b7295bf4567c81c69d4eb 294 Pfam PF00480 ROK family 5 284 3.8E-17 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RPIT_11700 b37f6a65461b7295bf4567c81c69d4eb 294 Gene3D G3DSA:3.30.420.40 4 109 4.9E-12 T 13-10-2018 RPIT_11700 b37f6a65461b7295bf4567c81c69d4eb 294 SUPERFAMILY SSF53067 4 289 9.01E-32 T 13-10-2018 RPIT_11700 b37f6a65461b7295bf4567c81c69d4eb 294 Gene3D G3DSA:3.30.420.40 110 288 1.4E-23 T 13-10-2018 RPIT_13265 73822799cce566238dd7a53a97d90210 747 ProSitePatterns PS00512 Alpha-galactosidase signature. 340 356 - T 13-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 RPIT_13265 73822799cce566238dd7a53a97d90210 747 Gene3D G3DSA:2.70.98.60 3 292 2.5E-34 T 13-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 RPIT_13265 73822799cce566238dd7a53a97d90210 747 PRINTS PR00743 Glycosyl hydrolase family 36 signature 339 354 1.8E-37 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 RPIT_13265 73822799cce566238dd7a53a97d90210 747 PRINTS PR00743 Glycosyl hydrolase family 36 signature 497 513 1.8E-37 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 RPIT_13265 73822799cce566238dd7a53a97d90210 747 PRINTS PR00743 Glycosyl hydrolase family 36 signature 522 538 1.8E-37 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 RPIT_13265 73822799cce566238dd7a53a97d90210 747 PRINTS PR00743 Glycosyl hydrolase family 36 signature 389 411 1.8E-37 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 RPIT_13265 73822799cce566238dd7a53a97d90210 747 PRINTS PR00743 Glycosyl hydrolase family 36 signature 447 462 1.8E-37 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 RPIT_13265 73822799cce566238dd7a53a97d90210 747 PRINTS PR00743 Glycosyl hydrolase family 36 signature 311 325 1.8E-37 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 RPIT_13265 73822799cce566238dd7a53a97d90210 747 PRINTS PR00743 Glycosyl hydrolase family 36 signature 226 241 1.8E-37 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 RPIT_13265 73822799cce566238dd7a53a97d90210 747 Gene3D G3DSA:3.20.20.70 293 609 1.2E-117 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_13265 73822799cce566238dd7a53a97d90210 747 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 628 727 3.7E-7 T 13-10-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 RPIT_13265 73822799cce566238dd7a53a97d90210 747 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 25 269 5.0E-46 T 13-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 RPIT_13265 73822799cce566238dd7a53a97d90210 747 PIRSF PIRSF005536 1 675 2.1E-165 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 RPIT_13265 73822799cce566238dd7a53a97d90210 747 SUPERFAMILY SSF51445 309 638 2.9E-93 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_13265 73822799cce566238dd7a53a97d90210 747 Pfam PF02065 Melibiase 275 610 1.6E-113 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 RPIT_10470 a87d6472078471d2dbc1ea7b25149adc 315 Pfam PF01497 Periplasmic binding protein 57 290 3.0E-35 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain RPIT_10470 a87d6472078471d2dbc1ea7b25149adc 315 Gene3D G3DSA:3.40.50.12250 41 296 2.0E-80 T 13-10-2018 RPIT_10470 a87d6472078471d2dbc1ea7b25149adc 315 SUPERFAMILY SSF53807 35 297 1.49E-60 T 13-10-2018 RPIT_10470 a87d6472078471d2dbc1ea7b25149adc 315 Gene3D G3DSA:3.40.50.12260 187 289 2.0E-80 T 13-10-2018 RPIT_04130 07f06117c29b96aefe5546c7fdb32d3d 942 Pfam PF02347 Glycine cleavage system P-protein 17 439 1.1E-171 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 RPIT_04130 07f06117c29b96aefe5546c7fdb32d3d 942 Pfam PF02347 Glycine cleavage system P-protein 469 724 4.7E-10 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 RPIT_04130 07f06117c29b96aefe5546c7fdb32d3d 942 Gene3D G3DSA:3.40.640.10 96 353 1.3E-106 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_04130 07f06117c29b96aefe5546c7fdb32d3d 942 Gene3D G3DSA:3.40.640.10 515 739 2.6E-59 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_04130 07f06117c29b96aefe5546c7fdb32d3d 942 SUPERFAMILY SSF53383 467 936 7.09E-99 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_04130 07f06117c29b96aefe5546c7fdb32d3d 942 Gene3D G3DSA:3.90.1150.10 751 881 2.6E-38 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_04130 07f06117c29b96aefe5546c7fdb32d3d 942 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 18 934 0.0 T 13-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 RPIT_04130 07f06117c29b96aefe5546c7fdb32d3d 942 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 9 940 24.241 T 13-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 RPIT_04130 07f06117c29b96aefe5546c7fdb32d3d 942 SUPERFAMILY SSF53383 18 439 1.08E-106 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_09930 379f2ad46b9a13d33dffb44ce0be40f7 309 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 303 1.9E-126 T 13-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 RPIT_09930 379f2ad46b9a13d33dffb44ce0be40f7 309 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 303 2.8E-131 T 13-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 RPIT_09930 379f2ad46b9a13d33dffb44ce0be40f7 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 290 1.2E-62 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme RPIT_09930 379f2ad46b9a13d33dffb44ce0be40f7 309 SUPERFAMILY SSF53686 1 303 3.14E-94 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIT_09930 379f2ad46b9a13d33dffb44ce0be40f7 309 Gene3D G3DSA:3.40.50.1100 6 299 6.1E-119 T 13-10-2018 RPIT_09930 379f2ad46b9a13d33dffb44ce0be40f7 309 Gene3D G3DSA:3.40.50.1100 44 142 6.1E-119 T 13-10-2018 RPIT_09930 379f2ad46b9a13d33dffb44ce0be40f7 309 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 RPIT_10465 219487e8de5913ea6e028bb44efa09e4 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.1E-33 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_10465 219487e8de5913ea6e028bb44efa09e4 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.1E-33 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_10465 219487e8de5913ea6e028bb44efa09e4 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.1E-33 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_10465 219487e8de5913ea6e028bb44efa09e4 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.1E-33 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_10465 219487e8de5913ea6e028bb44efa09e4 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 3 355 7.7E-131 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 RPIT_10465 219487e8de5913ea6e028bb44efa09e4 363 SUPERFAMILY SSF81271 273 354 1.55E-34 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RPIT_10465 219487e8de5913ea6e028bb44efa09e4 363 Pfam PF06071 Protein of unknown function (DUF933) 273 354 2.2E-37 T 13-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 RPIT_10465 219487e8de5913ea6e028bb44efa09e4 363 SUPERFAMILY SSF52540 3 295 5.66E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10465 219487e8de5913ea6e028bb44efa09e4 363 Gene3D G3DSA:3.10.20.30 48 354 4.1E-139 T 13-10-2018 IPR012675 Beta-grasp domain superfamily RPIT_10465 219487e8de5913ea6e028bb44efa09e4 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 357 41.462 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 RPIT_10465 219487e8de5913ea6e028bb44efa09e4 363 PIRSF PIRSF006641 1 357 1.3E-136 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 RPIT_10465 219487e8de5913ea6e028bb44efa09e4 363 Gene3D G3DSA:3.40.50.300 3 272 4.1E-139 T 13-10-2018 RPIT_10465 219487e8de5913ea6e028bb44efa09e4 363 Pfam PF01926 50S ribosome-binding GTPase 5 117 3.1E-22 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_10465 219487e8de5913ea6e028bb44efa09e4 363 Gene3D G3DSA:1.10.150.300 113 196 4.1E-139 T 13-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 RPIT_13860 54468aed6e83982c63b085295f550c8a 368 SUPERFAMILY SSF53448 1 229 6.19E-51 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_13860 54468aed6e83982c63b085295f550c8a 368 Gene3D G3DSA:3.90.550.10 1 214 2.0E-49 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_13860 54468aed6e83982c63b085295f550c8a 368 Pfam PF00535 Glycosyl transferase family 2 2 117 4.7E-33 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RPIT_10520 3d1068900b24714a5fd1da2f6d9d0b98 409 Pfam PF02601 Exonuclease VII, large subunit 127 344 8.8E-60 T 13-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 RPIT_10520 3d1068900b24714a5fd1da2f6d9d0b98 409 Pfam PF02601 Exonuclease VII, large subunit 322 395 1.4E-8 T 13-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 RPIT_10520 3d1068900b24714a5fd1da2f6d9d0b98 409 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 5 399 21.04 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RPIT_10520 3d1068900b24714a5fd1da2f6d9d0b98 409 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 19 398 5.8E-108 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RPIT_07625 ecdb13f018ea39bf188025f5334aa28f 238 SUPERFAMILY SSF55781 12 188 6.76E-28 T 13-10-2018 RPIT_07625 ecdb13f018ea39bf188025f5334aa28f 238 Gene3D G3DSA:3.30.450.40 1 187 2.7E-28 T 13-10-2018 IPR029016 GAF-like domain superfamily RPIT_07625 ecdb13f018ea39bf188025f5334aa28f 238 Pfam PF13185 GAF domain 28 162 4.2E-15 T 13-10-2018 IPR003018 GAF domain GO:0005515 RPIT_07625 ecdb13f018ea39bf188025f5334aa28f 238 SMART SM00065 27 172 8.1E-18 T 13-10-2018 IPR003018 GAF domain GO:0005515 RPIT_03060 0a1110b133cd61f8288c94818dfe9370 93 Gene3D G3DSA:3.30.860.10 1 93 3.2E-39 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03060 0a1110b133cd61f8288c94818dfe9370 93 Pfam PF00203 Ribosomal protein S19 3 83 2.9E-35 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03060 0a1110b133cd61f8288c94818dfe9370 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.6E-24 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03060 0a1110b133cd61f8288c94818dfe9370 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.6E-24 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03060 0a1110b133cd61f8288c94818dfe9370 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.6E-24 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03060 0a1110b133cd61f8288c94818dfe9370 93 PIRSF PIRSF002144 1 93 1.4E-31 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03060 0a1110b133cd61f8288c94818dfe9370 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 4.5E-47 T 13-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 RPIT_03060 0a1110b133cd61f8288c94818dfe9370 93 SUPERFAMILY SSF54570 3 84 9.29E-35 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03060 0a1110b133cd61f8288c94818dfe9370 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.914 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03060 0a1110b133cd61f8288c94818dfe9370 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 13-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_10230 0c9c0f8e7cb659e4f107241992d0f70e 624 Gene3D G3DSA:1.20.1560.10 21 338 1.0E-39 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_10230 0c9c0f8e7cb659e4f107241992d0f70e 624 SUPERFAMILY SSF90123 26 340 2.35E-45 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_10230 0c9c0f8e7cb659e4f107241992d0f70e 624 SUPERFAMILY SSF52540 436 604 1.72E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10230 0c9c0f8e7cb659e4f107241992d0f70e 624 ProSitePatterns PS00211 ABC transporters family signature. 515 529 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_10230 0c9c0f8e7cb659e4f107241992d0f70e 624 Pfam PF00005 ABC transporter 439 543 1.1E-7 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_10230 0c9c0f8e7cb659e4f107241992d0f70e 624 Gene3D G3DSA:3.40.50.300 352 611 5.8E-41 T 13-10-2018 RPIT_10230 0c9c0f8e7cb659e4f107241992d0f70e 624 Pfam PF00664 ABC transporter transmembrane region 56 311 3.7E-19 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 RPIT_08585 5bee5a81ebf7d1dab368d05b69ae0719 239 Gene3D G3DSA:3.40.1280.10 1 168 9.8E-65 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIT_08585 5bee5a81ebf7d1dab368d05b69ae0719 239 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 239 96.562 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RPIT_08585 5bee5a81ebf7d1dab368d05b69ae0719 239 Gene3D G3DSA:1.10.1270.20 169 237 8.6E-28 T 13-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RPIT_08585 5bee5a81ebf7d1dab368d05b69ae0719 239 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 230 1.2E-75 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RPIT_08585 5bee5a81ebf7d1dab368d05b69ae0719 239 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 22 226 4.0E-70 T 13-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RPIT_08585 5bee5a81ebf7d1dab368d05b69ae0719 239 SUPERFAMILY SSF75217 2 231 1.64E-86 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases RPIT_08585 5bee5a81ebf7d1dab368d05b69ae0719 239 PIRSF PIRSF000386 1 236 1.6E-89 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RPIT_06645 e0b34506ffaecfc67997149c9f6a6f79 219 SUPERFAMILY SSF50891 66 217 2.19E-35 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily RPIT_06645 e0b34506ffaecfc67997149c9f6a6f79 219 PIRSF PIRSF001467 56 217 4.1E-20 T 13-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 RPIT_06645 e0b34506ffaecfc67997149c9f6a6f79 219 Gene3D G3DSA:2.40.100.10 63 219 1.7E-42 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily RPIT_06645 e0b34506ffaecfc67997149c9f6a6f79 219 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 67 217 1.9E-27 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 RPIT_07145 202f8189fd9a49bd11c029f46e3df4d0 149 SUPERFAMILY SSF55729 3 145 1.12E-27 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_07145 202f8189fd9a49bd11c029f46e3df4d0 149 Gene3D G3DSA:3.40.630.30 1 143 9.5E-35 T 13-10-2018 RPIT_07145 202f8189fd9a49bd11c029f46e3df4d0 149 Pfam PF13673 Acetyltransferase (GNAT) domain 46 144 1.9E-13 T 13-10-2018 IPR000182 GNAT domain RPIT_02095 476e484eac17beb34b0402ee615812bc 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 290 2.6E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_02095 476e484eac17beb34b0402ee615812bc 297 Gene3D G3DSA:1.10.3720.10 24 284 9.1E-56 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_02095 476e484eac17beb34b0402ee615812bc 297 SUPERFAMILY SSF161098 21 297 1.15E-58 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_04985 6193dcaa4dc6b26e4b9124314b9bb85a 232 Pfam PF02592 Putative vitamin uptake transporter 59 218 1.5E-47 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 RPIT_04985 6193dcaa4dc6b26e4b9124314b9bb85a 232 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 19 224 1.3E-35 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 RPIT_04985 6193dcaa4dc6b26e4b9124314b9bb85a 232 Hamap MF_02088 Probable queuosine precursor transporter. 11 230 16.699 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 RPIT_06670 4fcd1f0587c5639a090a0791c1d0efe8 303 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 296 32.151 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06670 4fcd1f0587c5639a090a0791c1d0efe8 303 Gene3D G3DSA:3.40.1380.10 61 215 2.6E-87 T 13-10-2018 RPIT_06670 4fcd1f0587c5639a090a0791c1d0efe8 303 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 3 296 4.8E-90 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06670 4fcd1f0587c5639a090a0791c1d0efe8 303 SUPERFAMILY SSF52943 4 296 1.05E-76 T 13-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06670 4fcd1f0587c5639a090a0791c1d0efe8 303 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 282 295 - T 13-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06670 4fcd1f0587c5639a090a0791c1d0efe8 303 Pfam PF00231 ATP synthase 4 296 7.0E-85 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06670 4fcd1f0587c5639a090a0791c1d0efe8 303 PRINTS PR00126 ATP synthase gamma subunit signature 274 295 5.7E-29 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06670 4fcd1f0587c5639a090a0791c1d0efe8 303 PRINTS PR00126 ATP synthase gamma subunit signature 243 262 5.7E-29 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06670 4fcd1f0587c5639a090a0791c1d0efe8 303 PRINTS PR00126 ATP synthase gamma subunit signature 171 188 5.7E-29 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06670 4fcd1f0587c5639a090a0791c1d0efe8 303 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 5.7E-29 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06670 4fcd1f0587c5639a090a0791c1d0efe8 303 Gene3D G3DSA:1.10.287.80 7 292 2.6E-87 T 13-10-2018 RPIT_10595 8ca4ebe1ce13d4b9c095b6827884cba2 222 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 55 209 1.3E-62 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RPIT_10595 8ca4ebe1ce13d4b9c095b6827884cba2 222 Pfam PF01625 Peptide methionine sulfoxide reductase 57 209 4.8E-66 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RPIT_10595 8ca4ebe1ce13d4b9c095b6827884cba2 222 SUPERFAMILY SSF55068 23 218 3.53E-78 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RPIT_10595 8ca4ebe1ce13d4b9c095b6827884cba2 222 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 54 215 37.3 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RPIT_10595 8ca4ebe1ce13d4b9c095b6827884cba2 222 Gene3D G3DSA:3.30.1060.10 14 221 3.3E-87 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RPIT_01785 fc4fd6a69f11df5e69388f66891ce869 273 Gene3D G3DSA:3.40.630.30 1 272 4.7E-75 T 13-10-2018 RPIT_01785 fc4fd6a69f11df5e69388f66891ce869 273 SUPERFAMILY SSF55729 57 269 1.01E-39 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_01785 fc4fd6a69f11df5e69388f66891ce869 273 Pfam PF00583 Acetyltransferase (GNAT) family 172 260 1.2E-12 T 13-10-2018 IPR000182 GNAT domain RPIT_01785 fc4fd6a69f11df5e69388f66891ce869 273 TIGRFAM TIGR03448 mycothiol_MshD: mycothiol synthase 3 269 4.0E-69 T 13-10-2018 IPR017813 Mycothiol acetyltransferase GO:0016747 RPIT_01785 fc4fd6a69f11df5e69388f66891ce869 273 Hamap MF_01698 Mycothiol acetyltransferase [mshD]. 1 271 28.421 T 13-10-2018 IPR017813 Mycothiol acetyltransferase GO:0016747 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 Gene3D G3DSA:3.50.50.60 5 332 1.2E-120 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 456 1.6E-35 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.6E-31 T 13-10-2018 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 3.6E-31 T 13-10-2018 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 3.6E-31 T 13-10-2018 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 3.6E-31 T 13-10-2018 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 3.6E-31 T 13-10-2018 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 Gene3D G3DSA:3.50.50.60 148 270 1.2E-120 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 327 1.0E-65 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.1E-60 T 13-10-2018 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 1.1E-60 T 13-10-2018 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 1.1E-60 T 13-10-2018 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 1.1E-60 T 13-10-2018 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 1.1E-60 T 13-10-2018 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.1E-60 T 13-10-2018 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.1E-60 T 13-10-2018 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.1E-60 T 13-10-2018 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.1E-60 T 13-10-2018 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 SUPERFAMILY SSF51905 1 336 3.09E-63 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 SUPERFAMILY SSF55424 343 465 2.41E-39 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 465 2.1E-170 T 13-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 Gene3D G3DSA:3.30.390.30 345 466 1.1E-44 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 RPIT_05955 914ca3a6ad898dc26ebd0108de6ca879 466 PIRSF PIRSF000350 1 462 5.1E-87 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 RPIT_06635 eb13ffbfea92d29ec928312aa33d45ab 363 Pfam PF02371 Transposase IS116/IS110/IS902 family 248 323 1.2E-13 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RPIT_06635 eb13ffbfea92d29ec928312aa33d45ab 363 Pfam PF01548 Transposase 20 164 6.4E-16 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RPIT_08575 42e1b1cb1f4b30b114aa2a57148c6687 671 Pfam PF00890 FAD binding domain 56 475 2.5E-55 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RPIT_08575 42e1b1cb1f4b30b114aa2a57148c6687 671 SUPERFAMILY SSF51905 49 485 1.3E-46 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_08575 42e1b1cb1f4b30b114aa2a57148c6687 671 SUPERFAMILY SSF56425 281 437 1.94E-30 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 RPIT_08575 42e1b1cb1f4b30b114aa2a57148c6687 671 Pfam PF02910 Fumarate reductase flavoprotein C-term 536 670 3.9E-34 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RPIT_08575 42e1b1cb1f4b30b114aa2a57148c6687 671 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 56 670 1.5E-289 T 13-10-2018 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RPIT_08575 42e1b1cb1f4b30b114aa2a57148c6687 671 Gene3D G3DSA:1.20.58.100 508 622 9.4E-23 T 13-10-2018 RPIT_08575 42e1b1cb1f4b30b114aa2a57148c6687 671 Gene3D G3DSA:3.50.50.60 56 483 9.3E-98 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_08575 42e1b1cb1f4b30b114aa2a57148c6687 671 Gene3D G3DSA:3.90.700.10 312 450 9.3E-98 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 RPIT_08575 42e1b1cb1f4b30b114aa2a57148c6687 671 SUPERFAMILY SSF46977 528 670 2.49E-38 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RPIT_01995 eb4282d089582f3d4e9b051ae8769e2c 224 Gene3D G3DSA:3.40.50.880 1 221 5.0E-62 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_01995 eb4282d089582f3d4e9b051ae8769e2c 224 SMART SM01211 1 220 8.4E-117 T 13-10-2018 RPIT_01995 eb4282d089582f3d4e9b051ae8769e2c 224 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 2 218 38.545 T 13-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RPIT_01995 eb4282d089582f3d4e9b051ae8769e2c 224 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 3 218 2.7E-79 T 13-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RPIT_01995 eb4282d089582f3d4e9b051ae8769e2c 224 PIRSF PIRSF001586 1 223 2.4E-78 T 13-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RPIT_01995 eb4282d089582f3d4e9b051ae8769e2c 224 SUPERFAMILY SSF52317 2 218 3.01E-69 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_01995 eb4282d089582f3d4e9b051ae8769e2c 224 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 208 3.5E-35 T 13-10-2018 RPIT_00035 4a0c9516a2a33810411d7af4888dfdb7 353 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 70 217 8.2E-33 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RPIT_00035 4a0c9516a2a33810411d7af4888dfdb7 353 SUPERFAMILY SSF52518 34 352 1.09E-79 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_00035 4a0c9516a2a33810411d7af4888dfdb7 353 Gene3D G3DSA:3.40.50.970 45 221 8.4E-28 T 13-10-2018 RPIT_11030 5cd225e681cc778f70044fc635b08d75 191 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 183 1.6E-29 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase RPIT_11030 5cd225e681cc778f70044fc635b08d75 191 SUPERFAMILY SSF100950 6 188 2.37E-34 T 13-10-2018 IPR037171 NagB/RpiA transferase-like RPIT_11030 5cd225e681cc778f70044fc635b08d75 191 PIRSF PIRSF006806 4 186 5.2E-29 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase RPIT_11030 5cd225e681cc778f70044fc635b08d75 191 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 7 183 9.5E-35 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase RPIT_11030 5cd225e681cc778f70044fc635b08d75 191 Gene3D G3DSA:3.40.50.10420 2 191 2.0E-38 T 13-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily RPIT_06695 faa2aa5c4ea21b753103a21b767ed75d 259 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 36 254 7.7E-39 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06695 faa2aa5c4ea21b753103a21b767ed75d 259 Pfam PF00119 ATP synthase A chain 36 252 7.4E-50 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06695 faa2aa5c4ea21b753103a21b767ed75d 259 Hamap MF_01393 ATP synthase subunit a [atpB]. 34 258 12.957 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06695 faa2aa5c4ea21b753103a21b767ed75d 259 ProSitePatterns PS00449 ATP synthase a subunit signature. 179 188 - T 13-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06695 faa2aa5c4ea21b753103a21b767ed75d 259 PRINTS PR00123 ATP synthase A subunit signature 91 107 6.6E-18 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06695 faa2aa5c4ea21b753103a21b767ed75d 259 PRINTS PR00123 ATP synthase A subunit signature 176 198 6.6E-18 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06695 faa2aa5c4ea21b753103a21b767ed75d 259 PRINTS PR00123 ATP synthase A subunit signature 238 253 6.6E-18 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06695 faa2aa5c4ea21b753103a21b767ed75d 259 Gene3D G3DSA:1.20.120.220 82 259 2.3E-29 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06695 faa2aa5c4ea21b753103a21b767ed75d 259 SUPERFAMILY SSF81336 83 252 1.07E-34 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_12755 ae5a305ba2c0ec00fa95f3563a2bbbfc 470 Gene3D G3DSA:3.20.20.80 1 468 3.5E-178 T 13-10-2018 RPIT_12755 ae5a305ba2c0ec00fa95f3563a2bbbfc 470 SUPERFAMILY SSF51445 4 466 2.5E-160 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_12755 ae5a305ba2c0ec00fa95f3563a2bbbfc 470 TIGRFAM TIGR03356 BGL: beta-galactosidase 6 458 1.4E-171 T 13-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 RPIT_12755 ae5a305ba2c0ec00fa95f3563a2bbbfc 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 378 1.1E-20 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RPIT_12755 ae5a305ba2c0ec00fa95f3563a2bbbfc 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 1.1E-20 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RPIT_12755 ae5a305ba2c0ec00fa95f3563a2bbbfc 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 436 448 1.1E-20 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RPIT_12755 ae5a305ba2c0ec00fa95f3563a2bbbfc 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 287 301 1.1E-20 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RPIT_12755 ae5a305ba2c0ec00fa95f3563a2bbbfc 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 412 429 1.1E-20 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RPIT_12755 ae5a305ba2c0ec00fa95f3563a2bbbfc 470 Pfam PF00232 Glycosyl hydrolase family 1 4 465 1.6E-156 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RPIT_12755 ae5a305ba2c0ec00fa95f3563a2bbbfc 470 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 370 378 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site RPIT_12755 ae5a305ba2c0ec00fa95f3563a2bbbfc 470 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 13-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site RPIT_06825 b54a7039ac98430388584a6b44a1e5f3 263 Gene3D G3DSA:3.30.540.10 2 141 2.1E-38 T 13-10-2018 RPIT_06825 b54a7039ac98430388584a6b44a1e5f3 263 SUPERFAMILY SSF56655 6 262 3.01E-70 T 13-10-2018 RPIT_06825 b54a7039ac98430388584a6b44a1e5f3 263 Gene3D G3DSA:3.40.190.80 150 262 2.4E-20 T 13-10-2018 RPIT_06825 b54a7039ac98430388584a6b44a1e5f3 263 Pfam PF00459 Inositol monophosphatase family 24 244 8.6E-44 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RPIT_06825 b54a7039ac98430388584a6b44a1e5f3 263 TIGRFAM TIGR02067 his_9_HisN: histidinol-phosphatase 11 261 2.8E-83 T 13-10-2018 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase GO:0004401 KEGG: 00340+3.1.3.15 RPIT_06825 b54a7039ac98430388584a6b44a1e5f3 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 3.8E-17 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RPIT_06825 b54a7039ac98430388584a6b44a1e5f3 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 3.8E-17 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RPIT_06825 b54a7039ac98430388584a6b44a1e5f3 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 138 161 3.8E-17 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RPIT_06825 b54a7039ac98430388584a6b44a1e5f3 263 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 3.8E-17 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RPIT_06825 b54a7039ac98430388584a6b44a1e5f3 263 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site RPIT_06800 29113e76244aa2d0f3647b71144805e8 199 Gene3D G3DSA:1.10.10.10 125 191 3.1E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_06800 29113e76244aa2d0f3647b71144805e8 199 Pfam PF08281 Sigma-70, region 4 133 182 1.5E-17 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIT_06800 29113e76244aa2d0f3647b71144805e8 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 185 1.8E-28 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 RPIT_06800 29113e76244aa2d0f3647b71144805e8 199 Pfam PF04542 Sigma-70 region 2 26 90 4.9E-18 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_06800 29113e76244aa2d0f3647b71144805e8 199 TIGRFAM TIGR02947 SigH_actino: RNA polymerase sigma-70 factor, TIGR02947 family 16 198 7.1E-97 T 13-10-2018 IPR014293 RNA polymerase sigma-70, actinobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIT_06800 29113e76244aa2d0f3647b71144805e8 199 Gene3D G3DSA:1.10.1740.10 9 93 1.5E-32 T 13-10-2018 RPIT_06800 29113e76244aa2d0f3647b71144805e8 199 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 45 76 - T 13-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIT_06800 29113e76244aa2d0f3647b71144805e8 199 SUPERFAMILY SSF88659 129 186 2.06E-17 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like RPIT_06800 29113e76244aa2d0f3647b71144805e8 199 SUPERFAMILY SSF88946 17 104 8.63E-25 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_01620 578ceaea5a6c2458db18b3463562a7ec 204 Pfam PF01066 CDP-alcohol phosphatidyltransferase 26 90 2.0E-9 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RPIT_01620 578ceaea5a6c2458db18b3463562a7ec 204 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 90 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RPIT_01620 578ceaea5a6c2458db18b3463562a7ec 204 Gene3D G3DSA:1.20.120.1760 6 200 2.5E-55 T 13-10-2018 RPIT_14420 4072b84ff40ea1729ff88ef08545928b 393 Gene3D G3DSA:3.30.420.40 193 393 1.3E-81 T 13-10-2018 RPIT_14420 4072b84ff40ea1729ff88ef08545928b 393 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 200 217 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RPIT_14420 4072b84ff40ea1729ff88ef08545928b 393 SUPERFAMILY SSF53067 154 391 1.3E-83 T 13-10-2018 RPIT_14420 4072b84ff40ea1729ff88ef08545928b 393 Pfam PF00871 Acetokinase family 4 385 2.8E-145 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RPIT_14420 4072b84ff40ea1729ff88ef08545928b 393 PRINTS PR00471 Acetate kinase family signature 317 333 4.3E-46 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RPIT_14420 4072b84ff40ea1729ff88ef08545928b 393 PRINTS PR00471 Acetate kinase family signature 4 15 4.3E-46 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RPIT_14420 4072b84ff40ea1729ff88ef08545928b 393 PRINTS PR00471 Acetate kinase family signature 372 384 4.3E-46 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RPIT_14420 4072b84ff40ea1729ff88ef08545928b 393 PRINTS PR00471 Acetate kinase family signature 170 183 4.3E-46 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RPIT_14420 4072b84ff40ea1729ff88ef08545928b 393 PRINTS PR00471 Acetate kinase family signature 200 221 4.3E-46 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RPIT_14420 4072b84ff40ea1729ff88ef08545928b 393 PRINTS PR00471 Acetate kinase family signature 295 308 4.3E-46 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RPIT_14420 4072b84ff40ea1729ff88ef08545928b 393 TIGRFAM TIGR00016 ackA: acetate kinase 2 390 1.1E-142 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RPIT_14420 4072b84ff40ea1729ff88ef08545928b 393 Gene3D G3DSA:3.30.420.40 1 192 3.1E-69 T 13-10-2018 RPIT_14420 4072b84ff40ea1729ff88ef08545928b 393 PIRSF PIRSF000722 1 393 1.2E-146 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RPIT_14420 4072b84ff40ea1729ff88ef08545928b 393 SUPERFAMILY SSF53067 1 192 1.88E-62 T 13-10-2018 RPIT_14420 4072b84ff40ea1729ff88ef08545928b 393 Hamap MF_00020 Acetate kinase [ackA]. 1 393 174.772 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RPIT_14420 4072b84ff40ea1729ff88ef08545928b 393 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RPIT_04135 36c48ecbc2a1509e400ffb5c4836deb6 119 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 42 71 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 RPIT_04135 36c48ecbc2a1509e400ffb5c4836deb6 119 SUPERFAMILY SSF51230 3 118 7.77E-36 T 13-10-2018 IPR011053 Single hybrid motif RPIT_04135 36c48ecbc2a1509e400ffb5c4836deb6 119 Gene3D G3DSA:2.40.50.100 1 119 7.2E-40 T 13-10-2018 RPIT_04135 36c48ecbc2a1509e400ffb5c4836deb6 119 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 1 119 34.285 T 13-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 RPIT_04135 36c48ecbc2a1509e400ffb5c4836deb6 119 Pfam PF01597 Glycine cleavage H-protein 3 117 1.8E-35 T 13-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate RPIT_04135 36c48ecbc2a1509e400ffb5c4836deb6 119 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 2 118 1.4E-37 T 13-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 RPIT_05620 a436fbc6954bc6ce52bea5c9deac3861 634 SUPERFAMILY SSF52518 292 480 1.55E-48 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_05620 a436fbc6954bc6ce52bea5c9deac3861 634 ProSitePatterns PS00801 Transketolase signature 1. 29 48 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RPIT_05620 a436fbc6954bc6ce52bea5c9deac3861 634 SMART SM00861 317 481 6.8E-47 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RPIT_05620 a436fbc6954bc6ce52bea5c9deac3861 634 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 4 280 1.1E-109 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RPIT_05620 a436fbc6954bc6ce52bea5c9deac3861 634 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 6 619 1.3E-174 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RPIT_05620 a436fbc6954bc6ce52bea5c9deac3861 634 SUPERFAMILY SSF52518 2 348 7.42E-69 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_05620 a436fbc6954bc6ce52bea5c9deac3861 634 Gene3D G3DSA:3.40.50.920 498 625 1.3E-18 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 RPIT_05620 a436fbc6954bc6ce52bea5c9deac3861 634 Pfam PF02780 Transketolase, C-terminal domain 501 614 1.2E-15 T 13-10-2018 IPR033248 Transketolase, C-terminal domain RPIT_05620 a436fbc6954bc6ce52bea5c9deac3861 634 ProSitePatterns PS00802 Transketolase signature 2. 423 439 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RPIT_05620 a436fbc6954bc6ce52bea5c9deac3861 634 SUPERFAMILY SSF52922 501 620 1.96E-17 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 RPIT_05620 a436fbc6954bc6ce52bea5c9deac3861 634 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 3 623 38.916 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RPIT_05620 a436fbc6954bc6ce52bea5c9deac3861 634 Gene3D G3DSA:3.40.50.970 314 487 4.2E-54 T 13-10-2018 RPIT_05620 a436fbc6954bc6ce52bea5c9deac3861 634 Pfam PF02779 Transketolase, pyrimidine binding domain 317 480 1.4E-34 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RPIT_04410 ce0081e0194518a9b7375b8cf13633be 463 Pfam PF13347 MFS/sugar transport protein 15 439 4.3E-84 T 13-10-2018 RPIT_04410 ce0081e0194518a9b7375b8cf13633be 463 SUPERFAMILY SSF103473 12 437 6.54E-27 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_04410 ce0081e0194518a9b7375b8cf13633be 463 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 14 453 2.8E-113 T 13-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 RPIT_04410 ce0081e0194518a9b7375b8cf13633be 463 Gene3D G3DSA:1.20.1250.20 11 434 6.6E-18 T 13-10-2018 RPIT_07825 c9d66536269512a1efcd91aba511cf52 516 Gene3D G3DSA:3.20.20.40 40 279 1.1E-54 T 13-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 RPIT_07825 c9d66536269512a1efcd91aba511cf52 516 Gene3D G3DSA:3.20.20.40 280 426 4.2E-37 T 13-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 RPIT_07825 c9d66536269512a1efcd91aba511cf52 516 PRINTS PR00733 Glycosyl hydrolase family 6 signature 100 113 5.4E-26 T 13-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 RPIT_07825 c9d66536269512a1efcd91aba511cf52 516 PRINTS PR00733 Glycosyl hydrolase family 6 signature 199 212 5.4E-26 T 13-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 RPIT_07825 c9d66536269512a1efcd91aba511cf52 516 PRINTS PR00733 Glycosyl hydrolase family 6 signature 347 367 5.4E-26 T 13-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 RPIT_07825 c9d66536269512a1efcd91aba511cf52 516 PRINTS PR00733 Glycosyl hydrolase family 6 signature 57 76 5.4E-26 T 13-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 RPIT_07825 c9d66536269512a1efcd91aba511cf52 516 PRINTS PR00733 Glycosyl hydrolase family 6 signature 371 385 5.4E-26 T 13-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 RPIT_07825 c9d66536269512a1efcd91aba511cf52 516 PRINTS PR00733 Glycosyl hydrolase family 6 signature 128 143 5.4E-26 T 13-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 RPIT_07825 c9d66536269512a1efcd91aba511cf52 516 Pfam PF01341 Glycosyl hydrolases family 6 52 391 2.8E-80 T 13-10-2018 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 RPIT_07825 c9d66536269512a1efcd91aba511cf52 516 ProSitePatterns PS00655 Glycosyl hydrolases family 6 signature 1. 105 121 - T 13-10-2018 IPR001524 Glycoside hydrolase, family 6, conserved site GO:0004553|GO:0005975 RPIT_07825 c9d66536269512a1efcd91aba511cf52 516 SUPERFAMILY SSF51989 39 425 3.64E-70 T 13-10-2018 IPR036434 1, 4-beta cellobiohydrolase superfamily GO:0004553|GO:0030245 RPIT_02875 76f4f9a759c66d957e0137738691f15b 251 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 247 3.1E-45 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 RPIT_02875 76f4f9a759c66d957e0137738691f15b 251 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 92 112 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 RPIT_02875 76f4f9a759c66d957e0137738691f15b 251 SUPERFAMILY SSF52096 2 248 1.66E-71 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily RPIT_02875 76f4f9a759c66d957e0137738691f15b 251 Gene3D G3DSA:1.10.12.10 194 249 4.8E-10 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal RPIT_02875 76f4f9a759c66d957e0137738691f15b 251 Gene3D G3DSA:3.90.226.10 1 192 2.0E-63 T 13-10-2018 RPIT_02400 eeb4d506e0d968d363f9ac77b4187995 144 SMART SM00347 27 127 3.0E-16 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_02400 eeb4d506e0d968d363f9ac77b4187995 144 SUPERFAMILY SSF46785 9 140 7.13E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_02400 eeb4d506e0d968d363f9ac77b4187995 144 Gene3D G3DSA:1.10.10.10 10 142 5.0E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_02400 eeb4d506e0d968d363f9ac77b4187995 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site RPIT_02400 eeb4d506e0d968d363f9ac77b4187995 144 Pfam PF01047 MarR family 39 91 5.3E-13 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_02400 eeb4d506e0d968d363f9ac77b4187995 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 3.2E-6 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_02400 eeb4d506e0d968d363f9ac77b4187995 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 3.2E-6 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_02400 eeb4d506e0d968d363f9ac77b4187995 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 3.2E-6 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_01095 506b87bf9d1eaa2853f62dcfcfd9a59e 166 Pfam PF04248 Domain of unknown function (DUF427) 33 124 5.5E-25 T 13-10-2018 IPR007361 Domain of unknown function DUF427 RPIT_01095 506b87bf9d1eaa2853f62dcfcfd9a59e 166 Gene3D G3DSA:2.170.150.40 19 129 2.1E-25 T 13-10-2018 RPIT_11715 a5ed5dac26671741dd1eaf6cb1843ad3 282 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 19 267 48.473 T 13-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 RPIT_11715 a5ed5dac26671741dd1eaf6cb1843ad3 282 SUPERFAMILY SSF52402 4 273 4.44E-79 T 13-10-2018 RPIT_11715 a5ed5dac26671741dd1eaf6cb1843ad3 282 Gene3D G3DSA:3.40.50.620 1 278 1.2E-84 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_11715 a5ed5dac26671741dd1eaf6cb1843ad3 282 Pfam PF02540 NAD synthase 24 264 1.5E-66 T 13-10-2018 IPR022310 NAD/GMP synthase RPIT_11715 a5ed5dac26671741dd1eaf6cb1843ad3 282 TIGRFAM TIGR00552 nadE: NAD+ synthetase 22 273 2.1E-68 T 13-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 RPIT_06475 8dab61d7f3d5c09cbe376cdb32da2040 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 180 9.1E-13 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 RPIT_06475 8dab61d7f3d5c09cbe376cdb32da2040 189 SUPERFAMILY SSF88946 16 108 9.02E-13 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_06475 8dab61d7f3d5c09cbe376cdb32da2040 189 Gene3D G3DSA:1.10.1740.10 11 96 1.6E-10 T 13-10-2018 RPIT_06475 8dab61d7f3d5c09cbe376cdb32da2040 189 Gene3D G3DSA:1.10.10.10 97 183 3.0E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_06475 8dab61d7f3d5c09cbe376cdb32da2040 189 Pfam PF04542 Sigma-70 region 2 32 92 2.0E-8 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_13625 f1ccc89b7f0de63bc55376f872d2c12f 311 SUPERFAMILY SSF52540 7 223 5.2E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_13625 f1ccc89b7f0de63bc55376f872d2c12f 311 Pfam PF00005 ABC transporter 24 170 1.7E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_13625 f1ccc89b7f0de63bc55376f872d2c12f 311 Gene3D G3DSA:3.40.50.300 5 278 2.7E-65 T 13-10-2018 RPIT_13625 f1ccc89b7f0de63bc55376f872d2c12f 311 SMART SM00382 33 219 8.8E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_07135 d08e9d2f4ff0dd821e692de772b23e76 238 Pfam PF01553 Acyltransferase 18 145 9.8E-23 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 RPIT_07135 d08e9d2f4ff0dd821e692de772b23e76 238 SUPERFAMILY SSF69593 9 219 1.29E-36 T 13-10-2018 RPIT_07135 d08e9d2f4ff0dd821e692de772b23e76 238 SMART SM00563 30 149 1.7E-24 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 RPIT_14810 f724b4ea5a7203282b2a34550741cf18 170 SUPERFAMILY SSF55729 8 153 9.81E-26 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_14810 f724b4ea5a7203282b2a34550741cf18 170 Pfam PF13302 Acetyltransferase (GNAT) domain 15 152 3.0E-21 T 13-10-2018 IPR000182 GNAT domain RPIT_14810 f724b4ea5a7203282b2a34550741cf18 170 Gene3D G3DSA:3.40.630.30 9 162 6.3E-29 T 13-10-2018 RPIT_11825 257b9b5de7c6600e0fe121c4cce72365 585 SUPERFAMILY SSF52279 422 585 5.89E-18 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 RPIT_11825 257b9b5de7c6600e0fe121c4cce72365 585 SUPERFAMILY SSF51445 16 416 1.68E-101 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_11825 257b9b5de7c6600e0fe121c4cce72365 585 Gene3D G3DSA:3.20.20.300 20 404 3.0E-127 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 RPIT_11825 257b9b5de7c6600e0fe121c4cce72365 585 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 34 382 4.4E-104 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RPIT_11825 257b9b5de7c6600e0fe121c4cce72365 585 Gene3D G3DSA:3.40.50.1700 407 585 6.2E-35 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 RPIT_11825 257b9b5de7c6600e0fe121c4cce72365 585 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 422 585 7.2E-13 T 13-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 RPIT_11825 257b9b5de7c6600e0fe121c4cce72365 585 PRINTS PR00133 Glycosyl hydrolase family 3 signature 227 243 4.8E-7 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RPIT_11825 257b9b5de7c6600e0fe121c4cce72365 585 PRINTS PR00133 Glycosyl hydrolase family 3 signature 148 167 4.8E-7 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RPIT_11825 257b9b5de7c6600e0fe121c4cce72365 585 PRINTS PR00133 Glycosyl hydrolase family 3 signature 122 138 4.8E-7 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RPIT_11825 257b9b5de7c6600e0fe121c4cce72365 585 PRINTS PR00133 Glycosyl hydrolase family 3 signature 304 322 4.8E-7 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RPIT_11825 257b9b5de7c6600e0fe121c4cce72365 585 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 304 321 - T 13-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 RPIT_12805 fd81e8c08e2285f81bee4ebd057f7b81 92 Pfam PF13223 Protein of unknown function (DUF4031) 2 76 6.8E-27 T 13-10-2018 IPR025109 Domain of unknown function DUF4031 RPIT_01915 b972fe521c3d408a8ba2917b89c17c34 642 SUPERFAMILY SSF56645 31 254 3.53E-52 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 RPIT_01915 b972fe521c3d408a8ba2917b89c17c34 642 Gene3D G3DSA:1.20.140.10 275 444 9.7E-48 T 13-10-2018 RPIT_01915 b972fe521c3d408a8ba2917b89c17c34 642 SUPERFAMILY SSF47203 490 627 6.28E-31 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 RPIT_01915 b972fe521c3d408a8ba2917b89c17c34 642 Pfam PF01756 Acyl-CoA oxidase 496 625 7.2E-23 T 13-10-2018 IPR002655 Acyl-CoA oxidase, C-terminal GO:0003997|GO:0005777|GO:0006635 KEGG: 00071+1.3.3.6|KEGG: 00592+1.3.3.6|MetaCyc: PWY-5136|MetaCyc: PWY-6837|MetaCyc: PWY-6920|MetaCyc: PWY-7007|MetaCyc: PWY-7288|MetaCyc: PWY-7291|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7574|MetaCyc: PWY-7606|MetaCyc: PWY-7726|MetaCyc: PWY-7854|MetaCyc: PWY-7858 RPIT_01915 b972fe521c3d408a8ba2917b89c17c34 642 Gene3D G3DSA:1.10.540.10 18 128 2.1E-9 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 RPIT_01915 b972fe521c3d408a8ba2917b89c17c34 642 Gene3D G3DSA:1.20.140.10 493 623 1.1E-24 T 13-10-2018 RPIT_01915 b972fe521c3d408a8ba2917b89c17c34 642 SUPERFAMILY SSF47203 271 452 2.79E-46 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 RPIT_01915 b972fe521c3d408a8ba2917b89c17c34 642 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 275 436 4.5E-12 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIT_01915 b972fe521c3d408a8ba2917b89c17c34 642 PIRSF PIRSF000168 10 631 7.1E-152 T 13-10-2018 IPR012258 Acyl-CoA oxidase GO:0003997|GO:0005777|GO:0006631|GO:0071949 KEGG: 00071+1.3.3.6|KEGG: 00592+1.3.3.6|MetaCyc: PWY-5136|MetaCyc: PWY-6837|MetaCyc: PWY-6920|MetaCyc: PWY-7007|MetaCyc: PWY-7288|MetaCyc: PWY-7291|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7574|MetaCyc: PWY-7606|MetaCyc: PWY-7726|MetaCyc: PWY-7854|MetaCyc: PWY-7858|Reactome: R-HSA-9033241 RPIT_01915 b972fe521c3d408a8ba2917b89c17c34 642 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 26 125 2.4E-7 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 RPIT_01915 b972fe521c3d408a8ba2917b89c17c34 642 Gene3D G3DSA:2.40.110.10 131 264 1.0E-47 T 13-10-2018 RPIT_01915 b972fe521c3d408a8ba2917b89c17c34 642 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 241 7.8E-15 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 RPIT_04465 992788ba2636802ec8d3ded514bd7eb9 257 Gene3D G3DSA:3.40.1280.10 108 257 1.5E-42 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIT_04465 992788ba2636802ec8d3ded514bd7eb9 257 SUPERFAMILY SSF75217 109 256 1.77E-37 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases RPIT_04465 992788ba2636802ec8d3ded514bd7eb9 257 Pfam PF00588 SpoU rRNA Methylase family 115 254 1.8E-31 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RPIT_04465 992788ba2636802ec8d3ded514bd7eb9 257 Gene3D G3DSA:3.30.1330.30 3 101 7.6E-9 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like RPIT_04465 992788ba2636802ec8d3ded514bd7eb9 257 SUPERFAMILY SSF55315 5 101 1.06E-17 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like RPIT_12840 13b33fbe4ece3242a97a57f5ace1bf5b 363 Gene3D G3DSA:3.40.50.2300 177 316 3.3E-47 T 13-10-2018 RPIT_12840 13b33fbe4ece3242a97a57f5ace1bf5b 363 Gene3D G3DSA:3.40.50.2300 84 335 3.3E-47 T 13-10-2018 RPIT_12840 13b33fbe4ece3242a97a57f5ace1bf5b 363 SUPERFAMILY SSF53822 72 340 4.44E-46 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_12840 13b33fbe4ece3242a97a57f5ace1bf5b 363 Pfam PF13407 Periplasmic binding protein domain 82 334 4.0E-34 T 13-10-2018 IPR025997 Periplasmic binding protein RPIT_12280 425a65b3721472e5f1eebd6a11485078 298 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 10 297 52.444 T 13-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 RPIT_12280 425a65b3721472e5f1eebd6a11485078 298 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 135 155 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 RPIT_12280 425a65b3721472e5f1eebd6a11485078 298 SUPERFAMILY SSF52096 13 294 1.7E-75 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily RPIT_12280 425a65b3721472e5f1eebd6a11485078 298 TIGRFAM TIGR01929 menB: naphthoate synthase 18 294 9.4E-126 T 13-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 RPIT_12280 425a65b3721472e5f1eebd6a11485078 298 Gene3D G3DSA:1.10.12.10 238 286 2.2E-27 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal RPIT_12280 425a65b3721472e5f1eebd6a11485078 298 Gene3D G3DSA:3.90.226.10 2 237 7.3E-84 T 13-10-2018 RPIT_12280 425a65b3721472e5f1eebd6a11485078 298 Pfam PF00378 Enoyl-CoA hydratase/isomerase 33 292 1.3E-54 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 RPIT_00480 d52708bfd5a25948c33a47a62bde88d1 161 Gene3D G3DSA:3.90.550.10 2 153 5.7E-13 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_00480 d52708bfd5a25948c33a47a62bde88d1 161 Pfam PF00535 Glycosyl transferase family 2 20 124 2.2E-9 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RPIT_00480 d52708bfd5a25948c33a47a62bde88d1 161 SUPERFAMILY SSF53448 7 131 2.72E-13 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 SUPERFAMILY SSF100920 357 512 4.58E-60 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 Gene3D G3DSA:2.60.34.10 350 477 4.6E-58 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 Pfam PF00012 Hsp70 protein 78 576 5.3E-208 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 309 323 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 168 181 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 Gene3D G3DSA:3.90.640.10 200 287 6.6E-142 T 13-10-2018 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 611 35.725 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 Gene3D G3DSA:3.30.420.40 5 349 6.6E-142 T 13-10-2018 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 SUPERFAMILY SSF53067 4 159 1.07E-55 T 13-10-2018 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 SUPERFAMILY SSF100934 480 575 2.94E-15 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 SUPERFAMILY SSF53067 163 355 3.68E-61 T 13-10-2018 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 4 576 1.2E-271 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 Gene3D G3DSA:1.20.1270.10 480 580 4.7E-26 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 Gene3D G3DSA:3.30.420.40 160 338 6.6E-142 T 13-10-2018 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 PRINTS PR00301 70kDa heat shock protein signature 174 184 5.4E-73 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 PRINTS PR00301 70kDa heat shock protein signature 3 16 5.4E-73 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 PRINTS PR00301 70kDa heat shock protein signature 114 134 5.4E-73 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 PRINTS PR00301 70kDa heat shock protein signature 54 62 5.4E-73 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 PRINTS PR00301 70kDa heat shock protein signature 442 458 5.4E-73 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 PRINTS PR00301 70kDa heat shock protein signature 338 358 5.4E-73 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 PRINTS PR00301 70kDa heat shock protein signature 361 380 5.4E-73 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 PRINTS PR00301 70kDa heat shock protein signature 31 43 5.4E-73 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RPIT_11930 3fa3f39564b5531a23520b2f36be9195 620 PRINTS PR00301 70kDa heat shock protein signature 306 322 5.4E-73 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RPIT_14800 409626249a5c82e916e07888fe57552c 122 Pfam PF01479 S4 domain 3 48 1.5E-10 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_14800 409626249a5c82e916e07888fe57552c 122 SMART SM00363 2 64 1.4E-6 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_14800 409626249a5c82e916e07888fe57552c 122 PIRSF PIRSF016821 1 122 8.2E-37 T 13-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 RPIT_14800 409626249a5c82e916e07888fe57552c 122 Gene3D G3DSA:3.10.290.10 1 94 1.0E-24 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 RPIT_14800 409626249a5c82e916e07888fe57552c 122 SUPERFAMILY SSF55174 3 93 3.66E-19 T 13-10-2018 RPIT_07100 10777b40041f32d0e58c04fc17b5abb7 90 SMART SM00530 13 68 8.9E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_07100 10777b40041f32d0e58c04fc17b5abb7 90 Gene3D G3DSA:1.10.260.40 4 79 1.8E-17 T 13-10-2018 RPIT_07100 10777b40041f32d0e58c04fc17b5abb7 90 SUPERFAMILY SSF47413 6 70 3.66E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_07100 10777b40041f32d0e58c04fc17b5abb7 90 Pfam PF01381 Helix-turn-helix 14 68 5.1E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_11985 96e53402298c0bbfed320670b3dbe3eb 520 Gene3D G3DSA:3.40.50.300 2 245 5.0E-56 T 13-10-2018 RPIT_11985 96e53402298c0bbfed320670b3dbe3eb 520 Pfam PF00005 ABC transporter 283 438 1.2E-16 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_11985 96e53402298c0bbfed320670b3dbe3eb 520 Gene3D G3DSA:3.40.50.300 248 512 1.8E-38 T 13-10-2018 RPIT_11985 96e53402298c0bbfed320670b3dbe3eb 520 Pfam PF00005 ABC transporter 23 174 2.3E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_11985 96e53402298c0bbfed320670b3dbe3eb 520 SMART SM00382 291 507 9.7E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_11985 96e53402298c0bbfed320670b3dbe3eb 520 SMART SM00382 32 222 9.8E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_11985 96e53402298c0bbfed320670b3dbe3eb 520 ProSitePatterns PS00211 ABC transporters family signature. 411 425 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_11985 96e53402298c0bbfed320670b3dbe3eb 520 SUPERFAMILY SSF52540 250 489 1.04E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_11985 96e53402298c0bbfed320670b3dbe3eb 520 SUPERFAMILY SSF52540 6 228 3.74E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01295 9a74f1b8514ea27385810e9547250692 341 Gene3D G3DSA:3.40.50.2300 159 296 2.7E-96 T 13-10-2018 RPIT_01295 9a74f1b8514ea27385810e9547250692 341 Pfam PF13407 Periplasmic binding protein domain 61 315 4.7E-45 T 13-10-2018 IPR025997 Periplasmic binding protein RPIT_01295 9a74f1b8514ea27385810e9547250692 341 SUPERFAMILY SSF53822 55 333 1.81E-67 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_01295 9a74f1b8514ea27385810e9547250692 341 Gene3D G3DSA:3.40.50.2300 57 313 2.7E-96 T 13-10-2018 RPIT_11915 8ddcae974951a945ae75f7713249fa02 140 Pfam PF13411 MerR HTH family regulatory protein 15 82 5.0E-15 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_11915 8ddcae974951a945ae75f7713249fa02 140 SMART SM00422 15 84 4.2E-20 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_11915 8ddcae974951a945ae75f7713249fa02 140 SUPERFAMILY SSF46955 15 106 2.06E-18 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily RPIT_11915 8ddcae974951a945ae75f7713249fa02 140 Gene3D G3DSA:1.10.1660.10 12 108 8.1E-21 T 13-10-2018 RPIT_06585 291756ef96c6691505e7af4e78630763 564 PIRSF PIRSF006337 1 540 1.5E-196 T 13-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 RPIT_06585 291756ef96c6691505e7af4e78630763 564 Pfam PF00128 Alpha amylase, catalytic domain 109 190 5.7E-13 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_06585 291756ef96c6691505e7af4e78630763 564 Gene3D G3DSA:2.60.40.10 1 74 4.9E-20 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_06585 291756ef96c6691505e7af4e78630763 564 Gene3D G3DSA:1.10.10.760 431 469 6.9E-163 T 13-10-2018 RPIT_06585 291756ef96c6691505e7af4e78630763 564 SUPERFAMILY SSF81296 4 75 6.4E-15 T 13-10-2018 IPR014756 Immunoglobulin E-set RPIT_06585 291756ef96c6691505e7af4e78630763 564 Gene3D G3DSA:3.20.20.80 84 497 6.9E-163 T 13-10-2018 RPIT_06585 291756ef96c6691505e7af4e78630763 564 SMART SM00642 96 456 9.3E-9 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_06585 291756ef96c6691505e7af4e78630763 564 Pfam PF11941 Domain of unknown function (DUF3459) 488 525 3.7E-6 T 13-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) RPIT_06585 291756ef96c6691505e7af4e78630763 564 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 4 522 4.9E-196 T 13-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 RPIT_06585 291756ef96c6691505e7af4e78630763 564 SUPERFAMILY SSF51445 79 503 2.53E-98 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_01110 53f9f9f68dde422ef1d7b04b2b13147f 419 Gene3D G3DSA:1.10.1060.10 2 104 5.6E-10 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIT_01110 53f9f9f68dde422ef1d7b04b2b13147f 419 Pfam PF02754 Cysteine-rich domain 315 396 0.0046 T 13-10-2018 IPR004017 Cysteine-rich domain RPIT_01110 53f9f9f68dde422ef1d7b04b2b13147f 419 Pfam PF02754 Cysteine-rich domain 183 265 4.0E-8 T 13-10-2018 IPR004017 Cysteine-rich domain RPIT_01110 53f9f9f68dde422ef1d7b04b2b13147f 419 Pfam PF13183 4Fe-4S dicluster domain 25 87 1.1E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIT_01110 53f9f9f68dde422ef1d7b04b2b13147f 419 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 28 39 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIT_01110 53f9f9f68dde422ef1d7b04b2b13147f 419 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 73 84 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIT_01110 53f9f9f68dde422ef1d7b04b2b13147f 419 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 24 414 2.4E-89 T 13-10-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020 RPIT_01110 53f9f9f68dde422ef1d7b04b2b13147f 419 SUPERFAMILY SSF46548 23 107 6.45E-18 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 Pfam PF03483 B3/4 domain 227 397 4.2E-66 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 822 39.336 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 Gene3D G3DSA:3.30.56.10 414 486 2.8E-15 T 13-10-2018 RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 SMART SM00873 226 399 1.9E-85 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 Gene3D G3DSA:3.50.40.10 213 407 4.7E-75 T 13-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 Gene3D G3DSA:3.30.56.10 7 195 1.2E-53 T 13-10-2018 RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 SUPERFAMILY SSF50249 45 202 7.14E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 SMART SM00896 736 828 9.2E-36 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 SUPERFAMILY SSF56037 225 411 2.88E-68 T 13-10-2018 RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 Pfam PF03484 tRNA synthetase B5 domain 417 482 1.9E-13 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 Pfam PF01588 Putative tRNA binding domain 48 156 4.3E-11 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 Gene3D G3DSA:2.40.50.140 41 169 1.2E-53 T 13-10-2018 RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 Gene3D G3DSA:3.30.930.10 499 724 1.6E-52 T 13-10-2018 RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 Pfam PF03147 Ferredoxin-fold anticodon binding domain 736 828 6.4E-22 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 SUPERFAMILY SSF55681 478 723 3.58E-40 T 13-10-2018 RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 SUPERFAMILY SSF54991 734 828 4.84E-23 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 SUPERFAMILY SSF46955 414 485 7.87E-13 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 SMART SM00874 414 482 8.1E-16 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 Gene3D G3DSA:3.30.70.380 738 828 2.4E-23 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 RPIT_08255 78afd5d704c3660cf7ecbe78b7ee8a01 829 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 828 2.5E-180 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RPIT_07775 6d9aec38b65ed14acea3932b743bc28b 276 SMART SM00987 94 271 2.9E-22 T 13-10-2018 RPIT_07775 6d9aec38b65ed14acea3932b743bc28b 276 SMART SM00986 94 271 2.9E-22 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RPIT_07775 6d9aec38b65ed14acea3932b743bc28b 276 SUPERFAMILY SSF52141 62 275 5.89E-36 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RPIT_07775 6d9aec38b65ed14acea3932b743bc28b 276 Gene3D G3DSA:3.40.470.10 51 276 3.2E-57 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RPIT_07775 6d9aec38b65ed14acea3932b743bc28b 276 Pfam PF03167 Uracil DNA glycosylase superfamily 95 274 1.9E-22 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RPIT_05635 378eb5ba04662ecfc02cad3dc9b0479a 137 SUPERFAMILY SSF51316 9 135 1.05E-50 T 13-10-2018 IPR011057 Mss4-like superfamily RPIT_05635 378eb5ba04662ecfc02cad3dc9b0479a 137 Pfam PF01641 SelR domain 14 134 2.3E-49 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 RPIT_05635 378eb5ba04662ecfc02cad3dc9b0479a 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 10 134 2.0E-46 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 RPIT_05635 378eb5ba04662ecfc02cad3dc9b0479a 137 Gene3D G3DSA:2.170.150.20 1 137 2.6E-52 T 13-10-2018 RPIT_08535 b672ae31cac5769813d70bdcedc47e79 372 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 68 283 2.9E-59 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 RPIT_08535 b672ae31cac5769813d70bdcedc47e79 372 SUPERFAMILY SSF102405 98 288 6.78E-27 T 13-10-2018 RPIT_08535 b672ae31cac5769813d70bdcedc47e79 372 Pfam PF02481 DNA recombination-mediator protein A 68 279 8.1E-64 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 RPIT_08535 b672ae31cac5769813d70bdcedc47e79 372 Gene3D G3DSA:3.40.50.450 1 291 4.9E-81 T 13-10-2018 RPIT_13040 3b58e5dc097fc6d2941b16ea15e8e02b 181 Gene3D G3DSA:2.40.50.120 19 121 4.4E-6 T 13-10-2018 RPIT_13040 3b58e5dc097fc6d2941b16ea15e8e02b 181 SUPERFAMILY SSF50242 19 116 3.14E-11 T 13-10-2018 IPR008993 Tissue inhibitor of metalloproteinases-like, OB-fold RPIT_13855 aea8d0779adfe17aa5bc800ab230c76d 284 Pfam PF00535 Glycosyl transferase family 2 7 131 4.1E-29 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RPIT_13855 aea8d0779adfe17aa5bc800ab230c76d 284 SUPERFAMILY SSF53448 4 219 1.26E-52 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_13855 aea8d0779adfe17aa5bc800ab230c76d 284 Gene3D G3DSA:3.90.550.10 1 234 4.3E-50 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_13120 7bb185958e49f46f6f8360b77a0415b1 1197 Pfam PF00069 Protein kinase domain 742 819 1.2E-8 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RPIT_13120 7bb185958e49f46f6f8360b77a0415b1 1197 Gene3D G3DSA:1.10.510.10 751 912 3.4E-39 T 13-10-2018 RPIT_13120 7bb185958e49f46f6f8360b77a0415b1 1197 SUPERFAMILY SSF49785 1066 1183 4.13E-5 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_13120 7bb185958e49f46f6f8360b77a0415b1 1197 SUPERFAMILY SSF56112 664 848 2.25E-16 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily RPIT_13120 7bb185958e49f46f6f8360b77a0415b1 1197 Gene3D G3DSA:2.60.120.260 1058 1196 1.4E-7 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_13120 7bb185958e49f46f6f8360b77a0415b1 1197 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 1 527 1.8E-94 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIT_13120 7bb185958e49f46f6f8360b77a0415b1 1197 Pfam PF03023 MviN-like protein 27 485 1.7E-88 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIT_13120 7bb185958e49f46f6f8360b77a0415b1 1197 PRINTS PR01806 Virulence factor MviN signature 51 67 9.8E-12 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIT_13120 7bb185958e49f46f6f8360b77a0415b1 1197 PRINTS PR01806 Virulence factor MviN signature 134 158 9.8E-12 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIT_13120 7bb185958e49f46f6f8360b77a0415b1 1197 PRINTS PR01806 Virulence factor MviN signature 158 179 9.8E-12 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIT_13120 7bb185958e49f46f6f8360b77a0415b1 1197 PRINTS PR01806 Virulence factor MviN signature 372 391 9.8E-12 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIT_13120 7bb185958e49f46f6f8360b77a0415b1 1197 PRINTS PR01806 Virulence factor MviN signature 429 446 9.8E-12 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIT_13120 7bb185958e49f46f6f8360b77a0415b1 1197 PRINTS PR01806 Virulence factor MviN signature 32 51 9.8E-12 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIT_13120 7bb185958e49f46f6f8360b77a0415b1 1197 SMART SM00220 668 912 0.0047 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RPIT_14805 bc21b2dd31dc783a582665393ddfbdc2 337 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 1.6E-129 T 13-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 RPIT_14805 bc21b2dd31dc783a582665393ddfbdc2 337 Gene3D G3DSA:3.40.50.720 3 273 5.8E-137 T 13-10-2018 RPIT_14805 bc21b2dd31dc783a582665393ddfbdc2 337 Gene3D G3DSA:3.90.25.10 193 328 5.8E-137 T 13-10-2018 RPIT_14805 bc21b2dd31dc783a582665393ddfbdc2 337 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 2.0E-55 T 13-10-2018 IPR016040 NAD(P)-binding domain RPIT_14805 bc21b2dd31dc783a582665393ddfbdc2 337 SUPERFAMILY SSF51735 1 334 2.31E-96 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_14805 bc21b2dd31dc783a582665393ddfbdc2 337 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 5.1E-9 T 13-10-2018 RPIT_14805 bc21b2dd31dc783a582665393ddfbdc2 337 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 5.1E-9 T 13-10-2018 RPIT_14805 bc21b2dd31dc783a582665393ddfbdc2 337 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 5.1E-9 T 13-10-2018 RPIT_14260 3ef238e3f3bfb951d76f6de5e654e6dd 385 Pfam PF00296 Luciferase-like monooxygenase 1 294 8.2E-57 T 13-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIT_14260 3ef238e3f3bfb951d76f6de5e654e6dd 385 TIGRFAM TIGR04036 LLM_CE1758_fam: putative luciferase-like monooxygenase, FMN-dependent, CE1758 family 1 355 3.5E-214 T 13-10-2018 IPR023934 Luciferase-like monooxygenase, FMN-dependent, putative RPIT_14260 3ef238e3f3bfb951d76f6de5e654e6dd 385 Gene3D G3DSA:3.20.20.30 1 342 4.5E-70 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 RPIT_14260 3ef238e3f3bfb951d76f6de5e654e6dd 385 SUPERFAMILY SSF51679 1 332 1.44E-71 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 RPIT_11295 2a912c8ff5fb23cbb3c00d6eb2d1d438 235 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 229 2.1E-60 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 RPIT_11295 2a912c8ff5fb23cbb3c00d6eb2d1d438 235 Gene3D G3DSA:3.90.550.10 4 234 2.2E-66 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_11295 2a912c8ff5fb23cbb3c00d6eb2d1d438 235 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 107 114 - T 13-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 RPIT_11295 2a912c8ff5fb23cbb3c00d6eb2d1d438 235 SUPERFAMILY SSF53448 11 230 2.09E-48 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_11295 2a912c8ff5fb23cbb3c00d6eb2d1d438 235 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 10 229 39.982 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 RPIT_11295 2a912c8ff5fb23cbb3c00d6eb2d1d438 235 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 230 4.7E-59 T 13-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 RPIT_06340 dace020729ce36bd59ed29d58efb2a69 316 Pfam PF00583 Acetyltransferase (GNAT) family 221 302 1.3E-9 T 13-10-2018 IPR000182 GNAT domain RPIT_06340 dace020729ce36bd59ed29d58efb2a69 316 SUPERFAMILY SSF55729 17 302 1.54E-25 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_06340 dace020729ce36bd59ed29d58efb2a69 316 Gene3D G3DSA:3.40.630.30 6 315 4.5E-48 T 13-10-2018 RPIT_07180 ab228f3348e5e85b233c38fe2fe1b68f 407 Gene3D G3DSA:3.90.1150.10 19 395 1.3E-131 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_07180 ab228f3348e5e85b233c38fe2fe1b68f 407 PIRSF PIRSF000521 1 160 1.3E-6 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIT_07180 ab228f3348e5e85b233c38fe2fe1b68f 407 PIRSF PIRSF000521 180 407 3.9E-25 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIT_07180 ab228f3348e5e85b233c38fe2fe1b68f 407 SUPERFAMILY SSF53383 9 405 1.13E-114 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_07180 ab228f3348e5e85b233c38fe2fe1b68f 407 Gene3D G3DSA:3.40.640.10 65 315 1.3E-131 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_07180 ab228f3348e5e85b233c38fe2fe1b68f 407 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 12 403 5.1E-139 T 13-10-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RPIT_07180 ab228f3348e5e85b233c38fe2fe1b68f 407 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 267 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIT_07180 ab228f3348e5e85b233c38fe2fe1b68f 407 Pfam PF00202 Aminotransferase class-III 22 404 6.6E-111 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIT_14645 0fe1c44bd283b41eea88dce5c77d4241 266 Gene3D G3DSA:3.40.50.1390 10 135 4.8E-43 T 13-10-2018 RPIT_14645 0fe1c44bd283b41eea88dce5c77d4241 266 SMART SM00857 11 146 5.5E-55 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIT_14645 0fe1c44bd283b41eea88dce5c77d4241 266 Gene3D G3DSA:1.10.10.60 148 193 2.7E-5 T 13-10-2018 RPIT_14645 0fe1c44bd283b41eea88dce5c77d4241 266 ProSitePatterns PS00397 Site-specific recombinases active site. 14 22 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RPIT_14645 0fe1c44bd283b41eea88dce5c77d4241 266 SUPERFAMILY SSF53041 12 145 1.23E-41 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 RPIT_14645 0fe1c44bd283b41eea88dce5c77d4241 266 SUPERFAMILY SSF46689 148 190 1.52E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_14645 0fe1c44bd283b41eea88dce5c77d4241 266 Pfam PF00239 Resolvase, N terminal domain 12 145 2.7E-42 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIT_13420 4feca827ee25914ea1be8d2d688c3cf9 394 Gene3D G3DSA:1.10.3290.10 69 297 2.4E-43 T 13-10-2018 IPR036597 Fido-like domain superfamily RPIT_13420 4feca827ee25914ea1be8d2d688c3cf9 394 SUPERFAMILY SSF140931 129 298 1.96E-34 T 13-10-2018 IPR036597 Fido-like domain superfamily RPIT_13420 4feca827ee25914ea1be8d2d688c3cf9 394 SUPERFAMILY SSF46785 325 368 6.93E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_13420 4feca827ee25914ea1be8d2d688c3cf9 394 Pfam PF02661 Fic/DOC family 138 238 3.0E-21 T 13-10-2018 IPR003812 Fido domain RPIT_00785 4ec90bed0061b5d6ea11c5468c7af2c4 149 SUPERFAMILY SSF111069 29 148 1.44E-22 T 13-10-2018 IPR035944 YfbM-like super family RPIT_00785 4ec90bed0061b5d6ea11c5468c7af2c4 149 Gene3D G3DSA:3.40.1760.10 1 149 8.5E-28 T 13-10-2018 IPR035944 YfbM-like super family RPIT_00785 4ec90bed0061b5d6ea11c5468c7af2c4 149 Pfam PF08974 Domain of unknown function (DUF1877) 1 146 3.6E-30 T 13-10-2018 IPR015068 Protein of unknown function DUF1877 RPIT_13515 a5ae157b66340fa9df113d437947dfa3 572 SUPERFAMILY SSF54373 258 349 7.26E-7 T 13-10-2018 RPIT_13515 a5ae157b66340fa9df113d437947dfa3 572 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 28 45 - T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 RPIT_13515 a5ae157b66340fa9df113d437947dfa3 572 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 36 46 2.2E-31 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 RPIT_13515 a5ae157b66340fa9df113d437947dfa3 572 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 343 349 2.2E-31 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 RPIT_13515 a5ae157b66340fa9df113d437947dfa3 572 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 376 388 2.2E-31 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 RPIT_13515 a5ae157b66340fa9df113d437947dfa3 572 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 23 35 2.2E-31 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 RPIT_13515 a5ae157b66340fa9df113d437947dfa3 572 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 98 110 2.2E-31 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 RPIT_13515 a5ae157b66340fa9df113d437947dfa3 572 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 52 64 2.2E-31 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 RPIT_13515 a5ae157b66340fa9df113d437947dfa3 572 Gene3D G3DSA:3.50.50.60 24 395 2.7E-121 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_13515 a5ae157b66340fa9df113d437947dfa3 572 Gene3D G3DSA:3.30.9.10 102 350 2.7E-121 T 13-10-2018 RPIT_13515 a5ae157b66340fa9df113d437947dfa3 572 Pfam PF01266 FAD dependent oxidoreductase 24 353 1.8E-47 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIT_13515 a5ae157b66340fa9df113d437947dfa3 572 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 381 391 - T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 RPIT_13515 a5ae157b66340fa9df113d437947dfa3 572 SUPERFAMILY SSF51905 21 400 8.24E-36 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_13515 a5ae157b66340fa9df113d437947dfa3 572 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 409 533 6.7E-28 T 13-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 RPIT_13515 a5ae157b66340fa9df113d437947dfa3 572 Gene3D G3DSA:1.10.8.870 421 564 1.3E-28 T 13-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 RPIT_14130 6b75a7131be07d35b414f49bd27f759a 76 Pfam PF00403 Heavy-metal-associated domain 9 69 7.3E-13 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIT_14130 6b75a7131be07d35b414f49bd27f759a 76 SUPERFAMILY SSF55008 4 72 9.42E-19 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 RPIT_14130 6b75a7131be07d35b414f49bd27f759a 76 Gene3D G3DSA:3.30.70.100 3 71 7.7E-19 T 13-10-2018 RPIT_00575 5f6306cfa921931d27b2e36b8e77bf50 394 Pfam PF00535 Glycosyl transferase family 2 35 163 4.7E-18 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RPIT_00575 5f6306cfa921931d27b2e36b8e77bf50 394 Gene3D G3DSA:3.90.550.10 29 247 3.2E-22 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_00575 5f6306cfa921931d27b2e36b8e77bf50 394 SUPERFAMILY SSF53448 29 238 7.03E-28 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_11005 d60849af0ffa701a595f4f599ff1ecd0 148 Gene3D G3DSA:2.30.110.10 1 148 1.3E-37 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 RPIT_11005 d60849af0ffa701a595f4f599ff1ecd0 148 Pfam PF01613 Flavin reductase like domain 1 144 7.7E-26 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 RPIT_11005 d60849af0ffa701a595f4f599ff1ecd0 148 SUPERFAMILY SSF50475 1 145 5.89E-36 T 13-10-2018 RPIT_11005 d60849af0ffa701a595f4f599ff1ecd0 148 SMART SM00903 1 143 6.1E-42 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 RPIT_05180 3478a74a8092914948da6a79fda00592 227 PIRSF PIRSF004848 2 227 3.6E-61 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 RPIT_05180 3478a74a8092914948da6a79fda00592 227 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 3 226 5.7E-53 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 RPIT_05180 3478a74a8092914948da6a79fda00592 227 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 225 26.96 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 RPIT_05180 3478a74a8092914948da6a79fda00592 227 SUPERFAMILY SSF51419 2 224 4.58E-70 T 13-10-2018 IPR029066 PLP-binding barrel RPIT_05180 3478a74a8092914948da6a79fda00592 227 Gene3D G3DSA:3.20.20.10 1 227 1.2E-82 T 13-10-2018 IPR029066 PLP-binding barrel RPIT_05180 3478a74a8092914948da6a79fda00592 227 Pfam PF01168 Alanine racemase, N-terminal domain 7 226 1.5E-23 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_09295 a84f52637ee13a3593fd1d939f8d030b 280 SUPERFAMILY SSF53448 3 252 1.04E-28 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_09295 a84f52637ee13a3593fd1d939f8d030b 280 Pfam PF02709 N-terminal domain of galactosyltransferase 174 213 1.8E-9 T 13-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 RPIT_09295 a84f52637ee13a3593fd1d939f8d030b 280 Gene3D G3DSA:3.90.550.10 4 231 1.7E-21 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_11725 b8e9dceae8540e411fd53f6a03f22e0c 221 Gene3D G3DSA:1.10.3720.10 9 204 5.2E-26 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_11725 b8e9dceae8540e411fd53f6a03f22e0c 221 SUPERFAMILY SSF161098 8 196 4.58E-29 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_11725 b8e9dceae8540e411fd53f6a03f22e0c 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 209 1.4E-14 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_05045 98355d338c55f8af7334fb33feffdbf0 319 Pfam PF03061 Thioesterase superfamily 23 96 1.8E-14 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 RPIT_05045 98355d338c55f8af7334fb33feffdbf0 319 Pfam PF03061 Thioesterase superfamily 180 254 4.7E-16 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 RPIT_05045 98355d338c55f8af7334fb33feffdbf0 319 SUPERFAMILY SSF54637 8 154 6.29E-31 T 13-10-2018 IPR029069 HotDog domain superfamily RPIT_05045 98355d338c55f8af7334fb33feffdbf0 319 Gene3D G3DSA:3.10.129.10 3 151 7.7E-36 T 13-10-2018 RPIT_05045 98355d338c55f8af7334fb33feffdbf0 319 Gene3D G3DSA:3.10.129.10 152 306 7.7E-34 T 13-10-2018 RPIT_05045 98355d338c55f8af7334fb33feffdbf0 319 SUPERFAMILY SSF54637 167 306 3.25E-32 T 13-10-2018 IPR029069 HotDog domain superfamily RPIT_14200 65600541403cda80475eaa00fc3b3093 435 Gene3D G3DSA:1.20.1250.20 204 404 2.5E-12 T 13-10-2018 RPIT_14200 65600541403cda80475eaa00fc3b3093 435 Pfam PF07690 Major Facilitator Superfamily 10 322 1.4E-26 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIT_14200 65600541403cda80475eaa00fc3b3093 435 SUPERFAMILY SSF103473 3 405 1.57E-43 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_14200 65600541403cda80475eaa00fc3b3093 435 Gene3D G3DSA:1.20.1250.20 1 187 9.6E-25 T 13-10-2018 RPIT_04265 3dc7afec9b123e07e50aae383c30f030 301 Pfam PF10128 Glucose-6-phosphate dehydrogenase subunit 51 290 1.3E-71 T 13-10-2018 IPR004555 Glucose-6-phosphate dehydrogenase assembly protein OpcA RPIT_02930 30d915e02a4f04abd6ade103500e2ad1 511 Pfam PF00005 ABC transporter 280 436 2.5E-16 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_02930 30d915e02a4f04abd6ade103500e2ad1 511 Gene3D G3DSA:3.40.50.300 246 509 1.8E-36 T 13-10-2018 RPIT_02930 30d915e02a4f04abd6ade103500e2ad1 511 SUPERFAMILY SSF52540 247 494 4.3E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_02930 30d915e02a4f04abd6ade103500e2ad1 511 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_02930 30d915e02a4f04abd6ade103500e2ad1 511 SUPERFAMILY SSF52540 4 230 5.44E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_02930 30d915e02a4f04abd6ade103500e2ad1 511 Pfam PF00005 ABC transporter 21 172 2.1E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_02930 30d915e02a4f04abd6ade103500e2ad1 511 SMART SM00382 288 484 0.0014 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_02930 30d915e02a4f04abd6ade103500e2ad1 511 SMART SM00382 30 227 9.5E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_02930 30d915e02a4f04abd6ade103500e2ad1 511 Gene3D G3DSA:3.40.50.300 2 240 2.9E-54 T 13-10-2018 RPIT_02335 f920e915f8b9869613c85df7f3f78c0c 96 Gene3D G3DSA:1.10.10.60 9 93 9.9E-14 T 13-10-2018 RPIT_02335 f920e915f8b9869613c85df7f3f78c0c 96 SUPERFAMILY SSF46689 4 93 2.87E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_02335 f920e915f8b9869613c85df7f3f78c0c 96 Pfam PF01527 Transposase 4 82 3.9E-16 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RPIT_06230 4dd303562ad0d88376e07cf2785ec0a0 155 Gene3D G3DSA:3.30.420.140 5 144 1.6E-35 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 RPIT_06230 4dd303562ad0d88376e07cf2785ec0a0 155 SMART SM00732 4 103 1.1E-13 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 RPIT_06230 4dd303562ad0d88376e07cf2785ec0a0 155 Pfam PF03652 Holliday junction resolvase 5 135 8.6E-34 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RPIT_06230 4dd303562ad0d88376e07cf2785ec0a0 155 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 133 1.3E-22 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RPIT_06230 4dd303562ad0d88376e07cf2785ec0a0 155 SUPERFAMILY SSF53098 5 135 8.65E-27 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily RPIT_06230 4dd303562ad0d88376e07cf2785ec0a0 155 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 138 18.241 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RPIT_07070 f76e8d49ef65142dc989c5f5040fce28 292 SUPERFAMILY SSF74650 12 290 4.77E-51 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 RPIT_07070 f76e8d49ef65142dc989c5f5040fce28 292 Pfam PF01263 Aldose 1-epimerase 9 284 2.7E-39 T 13-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RPIT_07070 f76e8d49ef65142dc989c5f5040fce28 292 Gene3D G3DSA:2.70.98.10 8 292 2.8E-72 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 RPIT_06130 0f355413bf533f5133c63974cfff3af4 217 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 3 208 5.4E-76 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 RPIT_06130 0f355413bf533f5133c63974cfff3af4 217 PIRSF PIRSF001461 1 217 2.2E-87 T 13-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 RPIT_06130 0f355413bf533f5133c63974cfff3af4 217 Gene3D G3DSA:3.20.20.70 1 211 4.4E-78 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_06130 0f355413bf533f5133c63974cfff3af4 217 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 195 3.9E-73 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 RPIT_06130 0f355413bf533f5133c63974cfff3af4 217 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 28 42 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 RPIT_06130 0f355413bf533f5133c63974cfff3af4 217 SUPERFAMILY SSF51366 2 209 1.37E-63 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 RPIT_06130 0f355413bf533f5133c63974cfff3af4 217 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 130 152 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 RPIT_00560 0cb9de94fe61570e2cd92cbd7d8deff1 78 Pfam PF01381 Helix-turn-helix 20 69 1.0E-13 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_00560 0cb9de94fe61570e2cd92cbd7d8deff1 78 Gene3D G3DSA:1.10.260.40 13 76 1.7E-20 T 13-10-2018 RPIT_00560 0cb9de94fe61570e2cd92cbd7d8deff1 78 SUPERFAMILY SSF47413 12 77 7.88E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_00560 0cb9de94fe61570e2cd92cbd7d8deff1 78 SMART SM00530 16 71 1.1E-13 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_11425 8930ec9afc83240e2f4231d449b2ed27 446 Gene3D G3DSA:3.20.20.140 34 176 1.4E-7 T 13-10-2018 RPIT_11425 8930ec9afc83240e2f4231d449b2ed27 446 SUPERFAMILY SSF89550 37 364 2.55E-8 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 RPIT_04605 b69cb8e896ff15d389e8c67308b4b3fd 146 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 95 8.0E-29 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 RPIT_04605 b69cb8e896ff15d389e8c67308b4b3fd 146 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 112 9.8E-23 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 RPIT_04605 b69cb8e896ff15d389e8c67308b4b3fd 146 Gene3D G3DSA:3.30.300.20 1 116 1.0E-28 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta RPIT_04605 b69cb8e896ff15d389e8c67308b4b3fd 146 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 4 108 24.652 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 RPIT_04605 b69cb8e896ff15d389e8c67308b4b3fd 146 ProSitePatterns PS01319 Ribosome-binding factor A signature. 74 95 - T 13-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 RPIT_04605 b69cb8e896ff15d389e8c67308b4b3fd 146 Pfam PF02033 Ribosome-binding factor A 5 108 7.0E-26 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 RPIT_04605 b69cb8e896ff15d389e8c67308b4b3fd 146 SUPERFAMILY SSF89919 2 111 6.28E-30 T 13-10-2018 IPR023799 Ribosome-binding factor A domain superfamily RPIT_01445 e1b4b10fbedab9ec70c26cd65319fe6c 489 SUPERFAMILY SSF53335 151 288 1.66E-24 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_01445 e1b4b10fbedab9ec70c26cd65319fe6c 489 Pfam PF05175 Methyltransferase small domain 141 274 2.2E-17 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 RPIT_01445 e1b4b10fbedab9ec70c26cd65319fe6c 489 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 221 227 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RPIT_01445 e1b4b10fbedab9ec70c26cd65319fe6c 489 Gene3D G3DSA:3.40.50.150 136 301 5.3E-29 T 13-10-2018 RPIT_12485 f83aca0b5cbb0a1ad27a83cecc950ea8 483 Pfam PF03703 Bacterial PH domain 65 141 3.8E-6 T 13-10-2018 IPR005182 Domain of unknown function DUF304 RPIT_00975 9de7a6885bba772682fd09bdbd28c180 174 Gene3D G3DSA:1.20.120.450 1 167 3.8E-52 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes RPIT_00975 9de7a6885bba772682fd09bdbd28c180 174 Pfam PF12867 DinB superfamily 17 159 1.2E-11 T 13-10-2018 IPR024775 DinB-like domain RPIT_00975 9de7a6885bba772682fd09bdbd28c180 174 SUPERFAMILY SSF109854 3 162 1.08E-20 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes RPIT_11160 03470d3585a179f873148720eab845a1 257 Pfam PF11228 Protein of unknown function (DUF3027) 31 231 5.8E-77 T 13-10-2018 IPR021391 Protein of unknown function DUF3027 RPIT_01560 86fc0429abdf1974f9ab9a41d67c96b5 183 SUPERFAMILY SSF53271 7 182 2.85E-51 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like RPIT_01560 86fc0429abdf1974f9ab9a41d67c96b5 183 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 13 177 6.5E-60 T 13-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 RPIT_01560 86fc0429abdf1974f9ab9a41d67c96b5 183 Gene3D G3DSA:3.40.50.2020 2 182 3.3E-64 T 13-10-2018 RPIT_01560 86fc0429abdf1974f9ab9a41d67c96b5 183 Pfam PF00156 Phosphoribosyl transferase domain 17 164 3.6E-23 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIT_02405 d47e50105d26b67df10e221e353c4410 418 Pfam PF05977 Transmembrane secretion effector 2 389 9.0E-49 T 13-10-2018 IPR010290 Transmembrane secretion effector RPIT_02405 d47e50105d26b67df10e221e353c4410 418 SUPERFAMILY SSF103473 8 391 2.62E-43 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_02405 d47e50105d26b67df10e221e353c4410 418 Gene3D G3DSA:1.20.1250.20 11 388 3.2E-34 T 13-10-2018 RPIT_05935 371a387f5f07fe0dcf367fd6fb241c0d 261 Pfam PF12697 Alpha/beta hydrolase family 40 253 7.2E-19 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_05935 371a387f5f07fe0dcf367fd6fb241c0d 261 Gene3D G3DSA:3.40.50.1820 4 260 3.9E-39 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_05935 371a387f5f07fe0dcf367fd6fb241c0d 261 SUPERFAMILY SSF53474 15 256 1.88E-38 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_05935 371a387f5f07fe0dcf367fd6fb241c0d 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 121 134 9.0E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_05935 371a387f5f07fe0dcf367fd6fb241c0d 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 63 78 9.0E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_05935 371a387f5f07fe0dcf367fd6fb241c0d 261 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 9.0E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_11245 9115a6b54d5de7f49e27e84247e9de06 459 Pfam PF13224 Domain of unknown function (DUF4032) 227 388 1.6E-65 T 13-10-2018 IPR025111 Domain of unknown function DUF4032 RPIT_11245 9115a6b54d5de7f49e27e84247e9de06 459 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 61 189 4.7E-8 T 13-10-2018 RPIT_11245 9115a6b54d5de7f49e27e84247e9de06 459 SUPERFAMILY SSF56112 34 199 8.02E-8 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily RPIT_04540 7fc2567724d31dcd206a1855e107cc3e 428 Pfam PF02163 Peptidase family M50 13 380 3.9E-47 T 13-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 RPIT_04540 7fc2567724d31dcd206a1855e107cc3e 428 Gene3D G3DSA:2.30.42.10 174 264 1.0E-13 T 13-10-2018 RPIT_04540 7fc2567724d31dcd206a1855e107cc3e 428 SUPERFAMILY SSF50156 125 233 1.08E-14 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 RPIT_08030 986c05a83263b02469f17327a390726d 246 SUPERFAMILY SSF55120 67 244 4.52E-46 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIT_08030 986c05a83263b02469f17327a390726d 246 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 108 122 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RPIT_08030 986c05a83263b02469f17327a390726d 246 Gene3D G3DSA:3.30.70.1560 132 222 7.5E-58 T 13-10-2018 RPIT_08030 986c05a83263b02469f17327a390726d 246 SMART SM00363 9 68 9.3E-11 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_08030 986c05a83263b02469f17327a390726d 246 Pfam PF00849 RNA pseudouridylate synthase 70 202 1.3E-22 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIT_08030 986c05a83263b02469f17327a390726d 246 Pfam PF01479 S4 domain 9 52 3.3E-13 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_08030 986c05a83263b02469f17327a390726d 246 Gene3D G3DSA:3.10.290.10 4 64 1.9E-21 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 RPIT_08030 986c05a83263b02469f17327a390726d 246 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 75 234 6.1E-52 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RPIT_08030 986c05a83263b02469f17327a390726d 246 SUPERFAMILY SSF55174 5 74 8.83E-15 T 13-10-2018 RPIT_08030 986c05a83263b02469f17327a390726d 246 Gene3D G3DSA:3.30.70.580 73 230 7.5E-58 T 13-10-2018 RPIT_05340 528c8d5cad5f773f946ae2a023170e3d 564 Pfam PF10647 Lipoprotein LpqB beta-propeller domain 330 556 4.9E-16 T 13-10-2018 IPR018910 Lipoprotein LpqB, beta-propeller domain, C-terminal RPIT_05340 528c8d5cad5f773f946ae2a023170e3d 564 Pfam PF10646 Sporulation and spore germination 164 273 2.5E-8 T 13-10-2018 IPR019606 GerMN domain RPIT_05340 528c8d5cad5f773f946ae2a023170e3d 564 SMART SM00909 189 280 1.3E-8 T 13-10-2018 IPR019606 GerMN domain RPIT_01420 a55ea0408d41f6f63506164652fcc246 755 Pfam PF09369 Domain of unknown function (DUF1998) 644 723 1.5E-16 T 13-10-2018 IPR018973 DEAD/DEAH-box helicase, putative RPIT_01420 a55ea0408d41f6f63506164652fcc246 755 Pfam PF00271 Helicase conserved C-terminal domain 280 383 7.9E-12 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_01420 a55ea0408d41f6f63506164652fcc246 755 Pfam PF00270 DEAD/DEAH box helicase 51 232 1.4E-22 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIT_01420 a55ea0408d41f6f63506164652fcc246 755 Gene3D G3DSA:3.40.50.300 268 405 1.3E-19 T 13-10-2018 RPIT_01420 a55ea0408d41f6f63506164652fcc246 755 Gene3D G3DSA:3.40.50.300 33 246 1.9E-38 T 13-10-2018 RPIT_01420 a55ea0408d41f6f63506164652fcc246 755 SMART SM00487 44 262 6.2E-28 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIT_01420 a55ea0408d41f6f63506164652fcc246 755 SUPERFAMILY SSF52540 61 395 4.1E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01420 a55ea0408d41f6f63506164652fcc246 755 TIGRFAM TIGR03817 DECH_helic: helicase/secretion neighborhood putative DEAH-box helicase 16 748 2.1E-300 T 13-10-2018 IPR022307 DEAD/DEAH-box helicase, putative, actinobacteria RPIT_01420 a55ea0408d41f6f63506164652fcc246 755 SMART SM00490 302 383 1.4E-10 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_03740 fc8649734d92c3694df4c1791a6d98d3 210 Pfam PF01478 Type IV leader peptidase family 76 175 1.6E-5 T 13-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RPIT_13075 a08b6987ed3a86f7badc7dbdbabcce33 123 Gene3D G3DSA:3.10.50.40 3 123 5.7E-40 T 13-10-2018 RPIT_13075 a08b6987ed3a86f7badc7dbdbabcce33 123 SUPERFAMILY SSF54534 15 121 4.71E-40 T 13-10-2018 RPIT_13075 a08b6987ed3a86f7badc7dbdbabcce33 123 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 29 119 6.3E-31 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain RPIT_00755 b151653eda5f0211796c0d4caa26dc81 504 SUPERFAMILY SSF100950 230 503 4.42E-81 T 13-10-2018 IPR037171 NagB/RpiA transferase-like RPIT_00755 b151653eda5f0211796c0d4caa26dc81 504 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 11 502 9.6E-229 T 13-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 RPIT_00755 b151653eda5f0211796c0d4caa26dc81 504 Gene3D G3DSA:3.40.1080.20 342 482 5.5E-40 T 13-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily RPIT_00755 b151653eda5f0211796c0d4caa26dc81 504 Gene3D G3DSA:3.40.1080.10 6 173 1.7E-15 T 13-10-2018 RPIT_00755 b151653eda5f0211796c0d4caa26dc81 504 SUPERFAMILY SSF100950 4 228 1.57E-65 T 13-10-2018 IPR037171 NagB/RpiA transferase-like RPIT_00755 b151653eda5f0211796c0d4caa26dc81 504 Gene3D G3DSA:3.30.750.70 252 327 3.5E-5 T 13-10-2018 RPIT_00755 b151653eda5f0211796c0d4caa26dc81 504 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 7 222 3.0E-26 T 13-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 RPIT_00755 b151653eda5f0211796c0d4caa26dc81 504 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 329 469 1.5E-41 T 13-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain RPIT_06820 41c98045082a462821680b4fe1c1112e 331 Gene3D G3DSA:3.40.50.300 103 269 1.9E-43 T 13-10-2018 RPIT_06820 41c98045082a462821680b4fe1c1112e 331 Pfam PF03193 RsgA GTPase 101 269 6.7E-48 T 13-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 RPIT_06820 41c98045082a462821680b4fe1c1112e 331 SUPERFAMILY SSF52540 118 322 3.06E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06820 41c98045082a462821680b4fe1c1112e 331 Gene3D G3DSA:1.10.40.50 270 331 1.1E-7 T 13-10-2018 RPIT_06820 41c98045082a462821680b4fe1c1112e 331 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 331 27.192 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 RPIT_06820 41c98045082a462821680b4fe1c1112e 331 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 75 326 4.9E-52 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 RPIT_06465 3eebabc140b19079bebe2867373513fc 202 SUPERFAMILY SSF109854 9 112 2.88E-6 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes RPIT_06465 3eebabc140b19079bebe2867373513fc 202 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 4 179 1.2E-21 T 13-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type RPIT_06465 3eebabc140b19079bebe2867373513fc 202 TIGRFAM TIGR03085 TIGR03085: TIGR03085 family protein 4 194 5.9E-48 T 13-10-2018 IPR017519 Conserved hypothetical protein CHP03085 RPIT_01815 2be017bce80202271e28a3f380e81d8f 165 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 13-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 RPIT_01815 2be017bce80202271e28a3f380e81d8f 165 Gene3D G3DSA:3.40.30.10 1 165 5.5E-50 T 13-10-2018 RPIT_01815 2be017bce80202271e28a3f380e81d8f 165 Hamap MF_00269 Thiol peroxidase [tpx]. 3 165 37.692 T 13-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 RPIT_01815 2be017bce80202271e28a3f380e81d8f 165 Pfam PF08534 Redoxin 20 161 3.1E-28 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 RPIT_01815 2be017bce80202271e28a3f380e81d8f 165 SUPERFAMILY SSF52833 1 162 6.54E-46 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_00590 4b0b72ba0aacf91518c3d7a008c7edfc 329 SUPERFAMILY SSF51735 4 145 4.72E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_00590 4b0b72ba0aacf91518c3d7a008c7edfc 329 Gene3D G3DSA:3.40.50.720 5 312 1.5E-62 T 13-10-2018 RPIT_00590 4b0b72ba0aacf91518c3d7a008c7edfc 329 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 113 4.8E-17 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 RPIT_00590 4b0b72ba0aacf91518c3d7a008c7edfc 329 SUPERFAMILY SSF55347 123 258 2.29E-17 T 13-10-2018 RPIT_00590 4b0b72ba0aacf91518c3d7a008c7edfc 329 Gene3D G3DSA:3.30.360.10 123 279 1.5E-62 T 13-10-2018 RPIT_11920 4ae74a3b434a1e71c563164ab7eacf7d 382 SUPERFAMILY SSF57938 153 228 4.05E-15 T 13-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily RPIT_11920 4ae74a3b434a1e71c563164ab7eacf7d 382 ProSitePatterns PS00636 Nt-dnaJ domain signature. 52 71 - T 13-10-2018 IPR018253 DnaJ domain, conserved site RPIT_11920 4ae74a3b434a1e71c563164ab7eacf7d 382 Gene3D G3DSA:1.10.287.110 7 128 4.5E-28 T 13-10-2018 IPR036869 Chaperone J-domain superfamily RPIT_11920 4ae74a3b434a1e71c563164ab7eacf7d 382 Pfam PF00684 DnaJ central domain 166 227 2.3E-11 T 13-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RPIT_11920 4ae74a3b434a1e71c563164ab7eacf7d 382 Pfam PF00226 DnaJ domain 10 72 2.5E-24 T 13-10-2018 IPR001623 DnaJ domain RPIT_11920 4ae74a3b434a1e71c563164ab7eacf7d 382 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 10 370 5.6E-116 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RPIT_11920 4ae74a3b434a1e71c563164ab7eacf7d 382 Gene3D G3DSA:2.60.260.20 136 269 6.8E-33 T 13-10-2018 RPIT_11920 4ae74a3b434a1e71c563164ab7eacf7d 382 SUPERFAMILY SSF49493 132 286 9.68E-20 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RPIT_11920 4ae74a3b434a1e71c563164ab7eacf7d 382 Gene3D G3DSA:2.60.260.20 274 379 2.1E-26 T 13-10-2018 RPIT_11920 4ae74a3b434a1e71c563164ab7eacf7d 382 SUPERFAMILY SSF46565 9 111 5.36E-27 T 13-10-2018 IPR036869 Chaperone J-domain superfamily RPIT_11920 4ae74a3b434a1e71c563164ab7eacf7d 382 Gene3D G3DSA:2.10.230.10 166 227 6.8E-33 T 13-10-2018 RPIT_11920 4ae74a3b434a1e71c563164ab7eacf7d 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 7 379 35.845 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RPIT_11920 4ae74a3b434a1e71c563164ab7eacf7d 382 Pfam PF01556 DnaJ C terminal domain 140 353 1.5E-36 T 13-10-2018 IPR002939 Chaperone DnaJ, C-terminal RPIT_11920 4ae74a3b434a1e71c563164ab7eacf7d 382 PRINTS PR00625 DnaJ domain signature 30 45 6.1E-18 T 13-10-2018 IPR001623 DnaJ domain RPIT_11920 4ae74a3b434a1e71c563164ab7eacf7d 382 PRINTS PR00625 DnaJ domain signature 12 30 6.1E-18 T 13-10-2018 IPR001623 DnaJ domain RPIT_11920 4ae74a3b434a1e71c563164ab7eacf7d 382 PRINTS PR00625 DnaJ domain signature 47 67 6.1E-18 T 13-10-2018 IPR001623 DnaJ domain RPIT_11920 4ae74a3b434a1e71c563164ab7eacf7d 382 SMART SM00271 9 67 9.3E-26 T 13-10-2018 IPR001623 DnaJ domain RPIT_11920 4ae74a3b434a1e71c563164ab7eacf7d 382 SUPERFAMILY SSF49493 279 363 3.66E-20 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RPIT_12760 6092b888a39254c2a227bd7bdc5b4439 344 Gene3D G3DSA:3.40.50.2300 179 305 4.3E-62 T 13-10-2018 RPIT_12760 6092b888a39254c2a227bd7bdc5b4439 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 3.4E-17 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_12760 6092b888a39254c2a227bd7bdc5b4439 344 Pfam PF13377 Periplasmic binding protein-like domain 187 343 3.7E-31 T 13-10-2018 RPIT_12760 6092b888a39254c2a227bd7bdc5b4439 344 Gene3D G3DSA:3.40.50.2300 66 321 4.3E-62 T 13-10-2018 RPIT_12760 6092b888a39254c2a227bd7bdc5b4439 344 SMART SM00354 12 82 7.6E-28 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_12760 6092b888a39254c2a227bd7bdc5b4439 344 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 4.4E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_12760 6092b888a39254c2a227bd7bdc5b4439 344 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 24 34 4.4E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_12760 6092b888a39254c2a227bd7bdc5b4439 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 13-10-2018 RPIT_12760 6092b888a39254c2a227bd7bdc5b4439 344 SUPERFAMILY SSF53822 72 343 1.69E-56 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_12760 6092b888a39254c2a227bd7bdc5b4439 344 Gene3D G3DSA:1.10.260.40 8 65 7.9E-22 T 13-10-2018 RPIT_12760 6092b888a39254c2a227bd7bdc5b4439 344 SUPERFAMILY SSF47413 12 71 4.88E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_04960 6a412789e78bab2e583f046bb4806d76 262 SMART SM00849 21 180 7.8E-17 T 13-10-2018 IPR001279 Metallo-beta-lactamase RPIT_04960 6a412789e78bab2e583f046bb4806d76 262 Gene3D G3DSA:3.60.15.10 2 194 3.3E-36 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RPIT_04960 6a412789e78bab2e583f046bb4806d76 262 SUPERFAMILY SSF56281 4 223 3.93E-39 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RPIT_04960 6a412789e78bab2e583f046bb4806d76 262 Pfam PF00753 Metallo-beta-lactamase superfamily 20 171 9.0E-16 T 13-10-2018 IPR001279 Metallo-beta-lactamase RPIT_00335 da7b8de9eb48b651853ffff96ce81088 156 Gene3D G3DSA:3.40.50.2300 1 156 2.0E-41 T 13-10-2018 RPIT_00335 da7b8de9eb48b651853ffff96ce81088 156 SUPERFAMILY SSF52788 2 148 6.93E-39 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily RPIT_00335 da7b8de9eb48b651853ffff96ce81088 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 1.7E-13 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RPIT_00335 da7b8de9eb48b651853ffff96ce81088 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 1.7E-13 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RPIT_00335 da7b8de9eb48b651853ffff96ce81088 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 1.7E-13 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RPIT_00335 da7b8de9eb48b651853ffff96ce81088 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 1.7E-13 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RPIT_00335 da7b8de9eb48b651853ffff96ce81088 156 SMART SM00226 2 148 7.4E-33 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I RPIT_00335 da7b8de9eb48b651853ffff96ce81088 156 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 144 2.0E-31 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I RPIT_05640 e1bd694b4335fb00f587e70e08d007f9 257 Gene3D G3DSA:3.40.50.1400 3 121 1.1E-10 T 13-10-2018 RPIT_05640 e1bd694b4335fb00f587e70e08d007f9 257 Gene3D G3DSA:3.40.50.1400 127 234 6.1E-7 T 13-10-2018 RPIT_05640 e1bd694b4335fb00f587e70e08d007f9 257 SUPERFAMILY SSF53800 5 117 6.28E-10 T 13-10-2018 RPIT_02080 dcd6b3609e9a41333a2ad720378fc0dc 213 Pfam PF03413 Peptidase propeptide and YPEB domain 156 209 7.0E-5 T 13-10-2018 IPR025711 PepSY domain RPIT_02080 dcd6b3609e9a41333a2ad720378fc0dc 213 Gene3D G3DSA:3.10.450.40 156 212 5.3E-9 T 13-10-2018 RPIT_10920 e2ad5d2cc98f879459f9be979487457a 130 Gene3D G3DSA:3.90.1150.30 8 128 1.9E-8 T 13-10-2018 IPR038056 YjbR-like superfamily RPIT_10920 e2ad5d2cc98f879459f9be979487457a 130 SUPERFAMILY SSF142906 15 122 1.96E-13 T 13-10-2018 IPR038056 YjbR-like superfamily RPIT_10920 e2ad5d2cc98f879459f9be979487457a 130 Pfam PF04237 YjbR 22 116 2.0E-13 T 13-10-2018 IPR007351 Uncharacterised protein YjbR RPIT_02715 b78f5c7c26eaa0bcab8b7e00c54dc529 347 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 61 208 2.1E-31 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RPIT_02715 b78f5c7c26eaa0bcab8b7e00c54dc529 347 Gene3D G3DSA:3.40.50.970 90 222 5.5E-27 T 13-10-2018 RPIT_02715 b78f5c7c26eaa0bcab8b7e00c54dc529 347 SUPERFAMILY SSF52518 25 343 1.66E-82 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_08570 449384187b2fc06cb6978affa75d6a57 253 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 122 4.8E-22 T 13-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 RPIT_08570 449384187b2fc06cb6978affa75d6a57 253 SUPERFAMILY SSF46548 121 241 6.45E-24 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIT_08570 449384187b2fc06cb6978affa75d6a57 253 Pfam PF13183 4Fe-4S dicluster domain 160 230 1.5E-10 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIT_08570 449384187b2fc06cb6978affa75d6a57 253 SUPERFAMILY SSF54292 2 118 7.6E-20 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 RPIT_08570 449384187b2fc06cb6978affa75d6a57 253 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RPIT_08570 449384187b2fc06cb6978affa75d6a57 253 Gene3D G3DSA:1.10.1060.10 132 247 6.6E-15 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIT_08570 449384187b2fc06cb6978affa75d6a57 253 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 161 172 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIT_08570 449384187b2fc06cb6978affa75d6a57 253 Gene3D G3DSA:3.10.20.30 1 118 4.2E-25 T 13-10-2018 IPR012675 Beta-grasp domain superfamily RPIT_00960 77a1774bd132620ea1b51b5422a20e9d 647 Pfam PF03235 Protein of unknown function DUF262 4 212 9.4E-27 T 13-10-2018 IPR004919 Domain of unknown function DUF262 RPIT_04065 4eff2e40feb414592fdae51800921b14 142 SUPERFAMILY SSF109635 18 106 1.28E-6 T 13-10-2018 IPR037187 DksA, N-terminal domain superfamily RPIT_04065 4eff2e40feb414592fdae51800921b14 142 Gene3D G3DSA:1.20.120.910 14 142 4.9E-29 T 13-10-2018 RPIT_04065 4eff2e40feb414592fdae51800921b14 142 SUPERFAMILY SSF57716 108 141 5.94E-9 T 13-10-2018 RPIT_04065 4eff2e40feb414592fdae51800921b14 142 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 13-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RPIT_04065 4eff2e40feb414592fdae51800921b14 142 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 106 141 4.4E-11 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 RPIT_00950 c48e175647546df7aea5a5c9d61687dd 322 Pfam PF07714 Protein tyrosine kinase 150 261 7.5E-9 T 13-10-2018 IPR001245 Serine-threonine/tyrosine-protein kinase, catalytic domain GO:0004672|GO:0006468 RPIT_00950 c48e175647546df7aea5a5c9d61687dd 322 Gene3D G3DSA:1.10.510.10 150 293 3.7E-14 T 13-10-2018 RPIT_00950 c48e175647546df7aea5a5c9d61687dd 322 SUPERFAMILY SSF56112 147 256 3.56E-14 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily RPIT_13000 b8652e34a3211dfe5b6012da19faa273 300 SMART SM00525 205 225 5.5E-6 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 RPIT_13000 b8652e34a3211dfe5b6012da19faa273 300 ProSitePatterns PS01155 Endonuclease III family signature. 115 144 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 RPIT_13000 b8652e34a3211dfe5b6012da19faa273 300 SMART SM00478 54 204 4.6E-27 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RPIT_13000 b8652e34a3211dfe5b6012da19faa273 300 Pfam PF00633 Helix-hairpin-helix motif 116 141 1.4E-5 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 RPIT_13000 b8652e34a3211dfe5b6012da19faa273 300 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 206 222 - T 13-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RPIT_13000 b8652e34a3211dfe5b6012da19faa273 300 Gene3D G3DSA:1.10.340.30 35 145 9.9E-64 T 13-10-2018 RPIT_13000 b8652e34a3211dfe5b6012da19faa273 300 Gene3D G3DSA:1.10.1670.10 26 224 9.9E-64 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 RPIT_13000 b8652e34a3211dfe5b6012da19faa273 300 SUPERFAMILY SSF48150 22 232 1.22E-56 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RPIT_13000 b8652e34a3211dfe5b6012da19faa273 300 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 50 181 3.5E-15 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RPIT_13000 b8652e34a3211dfe5b6012da19faa273 300 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 206 222 5.1E-6 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 RPIT_12785 a5c7d09f0530ffa3ab5b0414325051df 336 Pfam PF02445 Quinolinate synthetase A protein 20 328 2.5E-108 T 13-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 RPIT_12785 a5c7d09f0530ffa3ab5b0414325051df 336 Gene3D G3DSA:3.40.50.10800 19 310 2.2E-108 T 13-10-2018 RPIT_12785 a5c7d09f0530ffa3ab5b0414325051df 336 Gene3D G3DSA:3.40.50.10800 99 328 2.2E-108 T 13-10-2018 RPIT_12785 a5c7d09f0530ffa3ab5b0414325051df 336 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 17 329 2.6E-89 T 13-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 RPIT_12785 a5c7d09f0530ffa3ab5b0414325051df 336 SUPERFAMILY SSF142754 16 329 1.96E-101 T 13-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 RPIT_12785 a5c7d09f0530ffa3ab5b0414325051df 336 Gene3D G3DSA:3.40.50.10800 184 281 2.2E-108 T 13-10-2018 RPIT_07655 69a75a2a60be51cb44387e3b414b374f 112 Pfam PF12680 SnoaL-like domain 13 103 1.4E-6 T 13-10-2018 IPR037401 SnoaL-like domain RPIT_07655 69a75a2a60be51cb44387e3b414b374f 112 SUPERFAMILY SSF54427 6 105 8.98E-10 T 13-10-2018 IPR032710 NTF2-like domain superfamily RPIT_07655 69a75a2a60be51cb44387e3b414b374f 112 Gene3D G3DSA:3.10.450.50 4 104 1.2E-7 T 13-10-2018 RPIT_06505 b1b502381634e50f6acdf0e36bca358e 495 Gene3D G3DSA:1.10.150.380 317 432 6.3E-17 T 13-10-2018 RPIT_06505 b1b502381634e50f6acdf0e36bca358e 495 Pfam PF02637 GatB domain 348 494 3.1E-40 T 13-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 RPIT_06505 b1b502381634e50f6acdf0e36bca358e 495 SUPERFAMILY SSF89095 347 494 6.02E-27 T 13-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 RPIT_06505 b1b502381634e50f6acdf0e36bca358e 495 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 13 494 5.7E-145 T 13-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RPIT_06505 b1b502381634e50f6acdf0e36bca358e 495 SUPERFAMILY SSF55931 17 316 8.5E-112 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 RPIT_06505 b1b502381634e50f6acdf0e36bca358e 495 Pfam PF02934 GatB/GatE catalytic domain 18 309 2.0E-104 T 13-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 RPIT_06505 b1b502381634e50f6acdf0e36bca358e 495 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 160 174 - T 13-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 RPIT_06505 b1b502381634e50f6acdf0e36bca358e 495 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 13 495 35.457 T 13-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RPIT_06505 b1b502381634e50f6acdf0e36bca358e 495 Gene3D G3DSA:1.10.10.410 434 495 5.1E-19 T 13-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RPIT_06505 b1b502381634e50f6acdf0e36bca358e 495 SMART SM00845 347 494 4.8E-60 T 13-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 RPIT_07645 6ba0dc9a5cd40264c6fdc5b202552f1e 133 Pfam PF01850 PIN domain 3 118 6.5E-8 T 13-10-2018 IPR002716 PIN domain RPIT_07645 6ba0dc9a5cd40264c6fdc5b202552f1e 133 SUPERFAMILY SSF88723 3 118 1.35E-13 T 13-10-2018 IPR029060 PIN-like domain superfamily RPIT_07645 6ba0dc9a5cd40264c6fdc5b202552f1e 133 Gene3D G3DSA:3.40.50.1010 1 122 1.2E-23 T 13-10-2018 RPIT_07645 6ba0dc9a5cd40264c6fdc5b202552f1e 133 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 127 10.41 T 13-10-2018 IPR022907 VapC family GO:0004540 RPIT_12905 36aa56e35d12adcc59c8d0d6c5d94052 283 SUPERFAMILY SSF54593 5 153 6.5E-27 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_12905 36aa56e35d12adcc59c8d0d6c5d94052 283 Gene3D G3DSA:3.10.180.10 4 131 7.7E-18 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_12905 36aa56e35d12adcc59c8d0d6c5d94052 283 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 102 121 - T 13-10-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 RPIT_12905 36aa56e35d12adcc59c8d0d6c5d94052 283 Gene3D G3DSA:3.10.180.10 168 283 3.9E-19 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_12905 36aa56e35d12adcc59c8d0d6c5d94052 283 SUPERFAMILY SSF54593 169 281 6.6E-22 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_12905 36aa56e35d12adcc59c8d0d6c5d94052 283 ProSitePatterns PS00934 Glyoxalase I signature 1. 172 193 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 RPIT_12905 36aa56e35d12adcc59c8d0d6c5d94052 283 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 170 258 3.4E-6 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIT_11690 104b11b89cf6babee88e3c853ab6ae1d 345 SUPERFAMILY SSF47413 10 67 1.13E-13 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_11690 104b11b89cf6babee88e3c853ab6ae1d 345 SMART SM00354 11 82 5.8E-21 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_11690 104b11b89cf6babee88e3c853ab6ae1d 345 Gene3D G3DSA:3.40.50.2300 171 303 4.1E-55 T 13-10-2018 RPIT_11690 104b11b89cf6babee88e3c853ab6ae1d 345 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 73 323 4.3E-20 T 13-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain RPIT_11690 104b11b89cf6babee88e3c853ab6ae1d 345 SUPERFAMILY SSF53822 69 328 1.47E-50 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_11690 104b11b89cf6babee88e3c853ab6ae1d 345 Gene3D G3DSA:1.10.260.40 5 68 2.0E-17 T 13-10-2018 RPIT_11690 104b11b89cf6babee88e3c853ab6ae1d 345 Gene3D G3DSA:3.40.50.2300 73 329 4.1E-55 T 13-10-2018 RPIT_11690 104b11b89cf6babee88e3c853ab6ae1d 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 58 1.9E-13 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_06220 98d95dd63f0cd8f9f0f1d21d1a8ae92a 270 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 9.6E-21 T 13-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 RPIT_06220 98d95dd63f0cd8f9f0f1d21d1a8ae92a 270 SUPERFAMILY SSF51735 100 262 1.84E-30 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_06220 98d95dd63f0cd8f9f0f1d21d1a8ae92a 270 Gene3D G3DSA:3.40.50.10860 5 250 3.5E-65 T 13-10-2018 RPIT_06220 98d95dd63f0cd8f9f0f1d21d1a8ae92a 270 Gene3D G3DSA:3.40.50.720 100 238 3.5E-65 T 13-10-2018 RPIT_06220 98d95dd63f0cd8f9f0f1d21d1a8ae92a 270 SUPERFAMILY SSF53223 2 93 8.63E-20 T 13-10-2018 RPIT_13215 8121a5a3d0ebcfc5d0665353b49f087a 447 Gene3D G3DSA:1.20.1250.20 18 426 1.5E-18 T 13-10-2018 RPIT_13215 8121a5a3d0ebcfc5d0665353b49f087a 447 SUPERFAMILY SSF103473 39 433 6.93E-24 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_03055 1804380ec1f399ddeba6750b2206dda3 278 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 13-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03055 1804380ec1f399ddeba6750b2206dda3 278 Gene3D G3DSA:4.10.950.10 197 274 1.3E-32 T 13-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03055 1804380ec1f399ddeba6750b2206dda3 278 SUPERFAMILY SSF50249 3 126 4.46E-49 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_03055 1804380ec1f399ddeba6750b2206dda3 278 Gene3D G3DSA:2.30.30.30 119 196 3.9E-30 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 RPIT_03055 1804380ec1f399ddeba6750b2206dda3 278 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 2.2E-54 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIT_03055 1804380ec1f399ddeba6750b2206dda3 278 PIRSF PIRSF002158 3 275 1.1E-94 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03055 1804380ec1f399ddeba6750b2206dda3 278 SMART SM01383 42 119 3.4E-42 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03055 1804380ec1f399ddeba6750b2206dda3 278 Gene3D G3DSA:2.40.50.140 1 115 1.4E-48 T 13-10-2018 RPIT_03055 1804380ec1f399ddeba6750b2206dda3 278 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.5E-33 T 13-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03055 1804380ec1f399ddeba6750b2206dda3 278 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.621 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RPIT_03055 1804380ec1f399ddeba6750b2206dda3 278 SMART SM01382 125 253 1.0E-88 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIT_03055 1804380ec1f399ddeba6750b2206dda3 278 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 4.2E-129 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RPIT_03055 1804380ec1f399ddeba6750b2206dda3 278 SUPERFAMILY SSF50104 127 271 2.41E-55 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily RPIT_06510 3a84cf66c78e51ea3dbc71b547dbf879 497 SUPERFAMILY SSF75304 2 481 7.46E-161 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIT_06510 3a84cf66c78e51ea3dbc71b547dbf879 497 Gene3D G3DSA:3.90.1300.10 4 488 1.3E-187 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIT_06510 3a84cf66c78e51ea3dbc71b547dbf879 497 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 482 89.224 T 13-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIT_06510 3a84cf66c78e51ea3dbc71b547dbf879 497 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 14 482 3.8E-182 T 13-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIT_06510 3a84cf66c78e51ea3dbc71b547dbf879 497 ProSitePatterns PS00571 Amidases signature. 153 184 - T 13-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 RPIT_06510 3a84cf66c78e51ea3dbc71b547dbf879 497 Pfam PF01425 Amidase 25 470 1.2E-158 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIT_02885 468b7f4faa1ed9c42e80a9d18a9a0533 290 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 8 287 16.77 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 RPIT_02885 468b7f4faa1ed9c42e80a9d18a9a0533 290 Pfam PF01256 Carbohydrate kinase 31 283 1.1E-35 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 RPIT_02885 468b7f4faa1ed9c42e80a9d18a9a0533 290 SUPERFAMILY SSF53613 8 288 3.43E-50 T 13-10-2018 IPR029056 Ribokinase-like RPIT_02885 468b7f4faa1ed9c42e80a9d18a9a0533 290 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 23 286 2.5E-39 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 RPIT_02885 468b7f4faa1ed9c42e80a9d18a9a0533 290 Gene3D G3DSA:3.40.1190.20 2 288 1.2E-59 T 13-10-2018 IPR029056 Ribokinase-like RPIT_00730 e18c0b8b56eddf03800597b1e0d5795f 190 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 81 188 2.7E-7 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 RPIT_00730 e18c0b8b56eddf03800597b1e0d5795f 190 SUPERFAMILY SSF50118 78 184 6.76E-8 T 13-10-2018 RPIT_10185 0f0c17f5564c8f56385b4b33ab10b688 239 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 63 235 8.5E-47 T 13-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RPIT_10185 0f0c17f5564c8f56385b4b33ab10b688 239 SUPERFAMILY SSF102405 36 235 3.05E-64 T 13-10-2018 RPIT_10185 0f0c17f5564c8f56385b4b33ab10b688 239 Pfam PF03641 Possible lysine decarboxylase 105 235 7.3E-34 T 13-10-2018 IPR031100 LOG family RPIT_10185 0f0c17f5564c8f56385b4b33ab10b688 239 Gene3D G3DSA:3.40.50.450 40 237 3.0E-68 T 13-10-2018 RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 145 159 1.0E-22 T 13-10-2018 RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 296 310 1.0E-22 T 13-10-2018 RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 548 1.0E-22 T 13-10-2018 RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 452 462 1.0E-22 T 13-10-2018 RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 552 564 1.0E-22 T 13-10-2018 RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 SUPERFAMILY SSF81653 101 192 2.75E-19 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 Gene3D G3DSA:2.70.150.10 6 198 4.3E-54 T 13-10-2018 RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 Gene3D G3DSA:3.40.50.1000 293 305 4.3E-54 T 13-10-2018 IPR023214 HAD superfamily RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 Gene3D G3DSA:3.40.50.1000 438 573 1.1E-44 T 13-10-2018 IPR023214 HAD superfamily RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 SUPERFAMILY SSF56784 294 632 1.9E-34 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 SUPERFAMILY SSF81665 5 770 2.88E-61 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 298 304 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 501 617 7.3E-28 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 70 314 3.8E-30 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 501 517 2.0E-5 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 529 545 2.0E-5 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 Gene3D G3DSA:1.20.1110.10 574 642 1.1E-44 T 13-10-2018 RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 Gene3D G3DSA:1.20.1110.10 39 292 4.3E-54 T 13-10-2018 RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 Gene3D G3DSA:3.40.1110.10 306 317 4.3E-54 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 Pfam PF00122 E1-E2 ATPase 102 275 1.3E-39 T 13-10-2018 RPIT_03820 6b52ceb2c91365ea35f72fb8d4add265 792 Pfam PF00702 haloacid dehalogenase-like hydrolase 293 543 3.6E-21 T 13-10-2018 RPIT_13595 967800d6af841e7720d9be91c1d9b36e 113 SUPERFAMILY SSF54211 2 109 9.61E-21 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RPIT_13595 967800d6af841e7720d9be91c1d9b36e 113 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 55 69 - T 13-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 RPIT_13595 967800d6af841e7720d9be91c1d9b36e 113 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 2 111 15.593 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RPIT_13595 967800d6af841e7720d9be91c1d9b36e 113 Pfam PF00825 Ribonuclease P 2 108 1.4E-23 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RPIT_13595 967800d6af841e7720d9be91c1d9b36e 113 Gene3D G3DSA:3.30.230.10 2 112 8.7E-23 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIT_13595 967800d6af841e7720d9be91c1d9b36e 113 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 9 101 2.0E-8 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RPIT_13595 967800d6af841e7720d9be91c1d9b36e 113 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 75 6.6E-17 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RPIT_00545 a16ede2690aeeec06ff3d4bc651f319e 376 Gene3D G3DSA:3.40.50.2000 186 348 3.3E-135 T 13-10-2018 RPIT_00545 a16ede2690aeeec06ff3d4bc651f319e 376 SUPERFAMILY SSF53756 1 371 2.74E-122 T 13-10-2018 RPIT_00545 a16ede2690aeeec06ff3d4bc651f319e 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 357 6.7E-138 T 13-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 RPIT_00545 a16ede2690aeeec06ff3d4bc651f319e 376 Gene3D G3DSA:3.40.50.2000 1 357 3.3E-135 T 13-10-2018 RPIT_00545 a16ede2690aeeec06ff3d4bc651f319e 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 19 361 2.5E-113 T 13-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RPIT_02290 e43271791e253b7e4a6cec0536ca3d0f 109 Pfam PF00239 Resolvase, N terminal domain 1 37 1.2E-8 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIT_02290 e43271791e253b7e4a6cec0536ca3d0f 109 Gene3D G3DSA:3.40.50.1390 1 46 1.6E-7 T 13-10-2018 RPIT_02290 e43271791e253b7e4a6cec0536ca3d0f 109 SUPERFAMILY SSF53041 1 37 4.19E-8 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 RPIT_02290 e43271791e253b7e4a6cec0536ca3d0f 109 SUPERFAMILY SSF46689 39 84 5.63E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_11760 24f4482ee5575d6f7084098adf0842be 407 Pfam PF00487 Fatty acid desaturase 87 347 7.7E-27 T 13-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 RPIT_10200 e4268b2bf2e6544ce5c75587d4765a10 306 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 293 1.5E-74 T 13-10-2018 IPR007296 Domain of unknown function DUF403 RPIT_06970 18738429178923483638bf861d7dfb22 1258 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 3 472 3.9E-236 T 13-10-2018 IPR010222 RNA helicase HrpA GO:0004004 RPIT_06970 18738429178923483638bf861d7dfb22 1258 SMART SM00490 227 326 2.9E-15 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_06970 18738429178923483638bf861d7dfb22 1258 Gene3D G3DSA:1.20.120.1080 370 470 2.4E-11 T 13-10-2018 RPIT_06970 18738429178923483638bf861d7dfb22 1258 Gene3D G3DSA:3.40.50.300 180 343 2.9E-57 T 13-10-2018 RPIT_06970 18738429178923483638bf861d7dfb22 1258 SMART SM00847 386 512 7.9E-24 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 RPIT_06970 18738429178923483638bf861d7dfb22 1258 Pfam PF04408 Helicase associated domain (HA2) 389 507 7.6E-13 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 RPIT_06970 18738429178923483638bf861d7dfb22 1258 SUPERFAMILY SSF52540 8 473 8.23E-93 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06970 18738429178923483638bf861d7dfb22 1258 Pfam PF00270 DEAD/DEAH box helicase 19 160 8.4E-9 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIT_06970 18738429178923483638bf861d7dfb22 1258 SMART SM00487 5 186 2.9E-28 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIT_06970 18738429178923483638bf861d7dfb22 1258 Pfam PF00271 Helicase conserved C-terminal domain 205 326 1.1E-11 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_06970 18738429178923483638bf861d7dfb22 1258 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 576 662 1.3E-15 T 13-10-2018 IPR011709 Domain of unknown function DUF1605 RPIT_06970 18738429178923483638bf861d7dfb22 1258 Gene3D G3DSA:3.40.50.300 2 179 1.6E-74 T 13-10-2018 RPIT_06970 18738429178923483638bf861d7dfb22 1258 Pfam PF11898 Domain of unknown function (DUF3418) 676 1254 4.5E-181 T 13-10-2018 IPR024590 RNA helicase HrpA, C-terminal RPIT_01820 ab239db7bd70a929c4c55ea309a201c2 304 PIRSF PIRSF028756 31 302 5.5E-113 T 13-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 RPIT_01820 ab239db7bd70a929c4c55ea309a201c2 304 SUPERFAMILY SSF52540 81 261 7.98E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01820 ab239db7bd70a929c4c55ea309a201c2 304 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 51 276 3.3E-111 T 13-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 RPIT_01820 ab239db7bd70a929c4c55ea309a201c2 304 Gene3D G3DSA:3.40.50.300 20 296 8.9E-96 T 13-10-2018 RPIT_01820 ab239db7bd70a929c4c55ea309a201c2 304 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 50 275 3.3E-100 T 13-10-2018 IPR022488 Polyphosphate kinase-2-related RPIT_11260 43366a0eec00fe72285f3a5de9c2dff6 238 Gene3D G3DSA:3.40.30.10 1 214 1.7E-75 T 13-10-2018 RPIT_11260 43366a0eec00fe72285f3a5de9c2dff6 238 Pfam PF01323 DSBA-like thioredoxin domain 3 210 2.6E-39 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 RPIT_11260 43366a0eec00fe72285f3a5de9c2dff6 238 SUPERFAMILY SSF52833 3 216 1.43E-44 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_05835 730a7b35982613e43f351ba57dac96a4 426 Pfam PF13416 Bacterial extracellular solute-binding protein 60 347 3.6E-31 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein RPIT_05835 730a7b35982613e43f351ba57dac96a4 426 Gene3D G3DSA:3.40.190.10 38 425 7.1E-77 T 13-10-2018 RPIT_05835 730a7b35982613e43f351ba57dac96a4 426 SUPERFAMILY SSF53850 46 419 4.44E-68 T 13-10-2018 RPIT_08600 0519cbe7afcfbfdaffa787ac5e974d4a 161 SUPERFAMILY SSF54565 3 85 8.63E-31 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08600 0519cbe7afcfbfdaffa787ac5e974d4a 161 Pfam PF00886 Ribosomal protein S16 9 67 1.1E-21 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08600 0519cbe7afcfbfdaffa787ac5e974d4a 161 TIGRFAM TIGR00002 S16: ribosomal protein bS16 4 79 3.8E-29 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08600 0519cbe7afcfbfdaffa787ac5e974d4a 161 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 23.074 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08600 0519cbe7afcfbfdaffa787ac5e974d4a 161 Gene3D G3DSA:3.30.1320.10 1 111 1.5E-28 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08600 0519cbe7afcfbfdaffa787ac5e974d4a 161 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 13-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_05170 f0a3e0cb8cda3888977ece45fe68a47f 322 Gene3D G3DSA:3.40.50.410 92 284 2.0E-42 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily RPIT_05170 f0a3e0cb8cda3888977ece45fe68a47f 322 SUPERFAMILY SSF53300 91 281 5.04E-29 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily RPIT_05170 f0a3e0cb8cda3888977ece45fe68a47f 322 Pfam PF07584 Aerotolerance regulator N-terminal 7 80 9.8E-9 T 13-10-2018 IPR024163 Aerotolerance regulator, N-terminal RPIT_05170 f0a3e0cb8cda3888977ece45fe68a47f 322 SMART SM00327 90 286 6.9E-23 T 13-10-2018 IPR002035 von Willebrand factor, type A RPIT_05170 f0a3e0cb8cda3888977ece45fe68a47f 322 Pfam PF13519 von Willebrand factor type A domain 93 204 8.0E-20 T 13-10-2018 IPR002035 von Willebrand factor, type A RPIT_03335 723191006aa205f18c28e42d2b20e152 672 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 7.2E-44 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 RPIT_03335 723191006aa205f18c28e42d2b20e152 672 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 7.2E-44 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 RPIT_03335 723191006aa205f18c28e42d2b20e152 672 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 7.2E-44 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 RPIT_03335 723191006aa205f18c28e42d2b20e152 672 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 7.2E-44 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 RPIT_03335 723191006aa205f18c28e42d2b20e152 672 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 7.2E-44 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 RPIT_03335 723191006aa205f18c28e42d2b20e152 672 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 7.2E-44 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 RPIT_03335 723191006aa205f18c28e42d2b20e152 672 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 7.2E-44 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 RPIT_03335 723191006aa205f18c28e42d2b20e152 672 Gene3D G3DSA:3.30.70.1430 41 134 1.9E-15 T 13-10-2018 RPIT_03335 723191006aa205f18c28e42d2b20e152 672 Gene3D G3DSA:3.30.2090.10 180 267 1.0E-13 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIT_03335 723191006aa205f18c28e42d2b20e152 672 SUPERFAMILY SSF82693 134 323 4.45E-11 T 13-10-2018 RPIT_03335 723191006aa205f18c28e42d2b20e152 672 SUPERFAMILY SSF82866 290 492 6.93E-40 T 13-10-2018 RPIT_03335 723191006aa205f18c28e42d2b20e152 672 Gene3D G3DSA:1.20.1640.10 296 507 9.9E-56 T 13-10-2018 RPIT_03335 723191006aa205f18c28e42d2b20e152 672 Pfam PF00873 AcrB/AcrD/AcrF family 7 650 2.6E-133 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 RPIT_03335 723191006aa205f18c28e42d2b20e152 672 SUPERFAMILY SSF82693 41 130 2.88E-16 T 13-10-2018 RPIT_03335 723191006aa205f18c28e42d2b20e152 672 SUPERFAMILY SSF82714 183 265 4.58E-11 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIT_14555 0e03ddc007388718bb054f52acd67f4d 222 Gene3D G3DSA:3.30.70.2970 16 127 9.8E-15 T 13-10-2018 RPIT_14555 0e03ddc007388718bb054f52acd67f4d 222 Gene3D G3DSA:3.30.110.170 6 219 9.8E-15 T 13-10-2018 RPIT_14555 0e03ddc007388718bb054f52acd67f4d 222 Pfam PF04402 Protein of unknown function (DUF541) 4 219 1.4E-23 T 13-10-2018 IPR007497 Protein of unknown function DUF541 RPIT_00380 ab64ee4871b361aef5e289b968e6740f 242 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 30 198 6.3E-58 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 RPIT_00380 ab64ee4871b361aef5e289b968e6740f 242 Gene3D G3DSA:3.40.630.70 56 223 1.5E-55 T 13-10-2018 RPIT_00380 ab64ee4871b361aef5e289b968e6740f 242 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 28 210 7.4E-53 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 RPIT_00380 ab64ee4871b361aef5e289b968e6740f 242 SUPERFAMILY SSF55729 14 217 2.65E-63 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_00380 ab64ee4871b361aef5e289b968e6740f 242 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 242 67.499 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 RPIT_07830 8c211b0e215cd99a8af02e3ddd46e4e5 152 Gene3D G3DSA:3.40.630.30 20 145 2.4E-6 T 13-10-2018 RPIT_07830 8c211b0e215cd99a8af02e3ddd46e4e5 152 SUPERFAMILY SSF55729 20 141 2.37E-5 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_13600 1f45830eac563079b4ac0443c76f00be 45 Pfam PF00468 Ribosomal protein L34 3 45 1.0E-20 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_13600 1f45830eac563079b4ac0443c76f00be 45 ProSitePatterns PS00784 Ribosomal protein L34 signature. 3 22 - T 13-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_13600 1f45830eac563079b4ac0443c76f00be 45 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 2 45 16.163 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_13600 1f45830eac563079b4ac0443c76f00be 45 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 45 3.8E-20 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_12435 4b898bcee65a0bc6447b0c4b95a0738c 222 SUPERFAMILY SSF102588 8 210 4.05E-39 T 13-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 RPIT_12435 4b898bcee65a0bc6447b0c4b95a0738c 222 Gene3D G3DSA:3.40.50.10320 3 211 2.2E-39 T 13-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 RPIT_12435 4b898bcee65a0bc6447b0c4b95a0738c 222 Pfam PF02585 GlcNAc-PI de-N-acetylase 10 134 5.0E-26 T 13-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 RPIT_05425 839201fc314229a2e2ba9f0f1b9de257 313 Gene3D G3DSA:3.90.920.30 23 307 1.7E-84 T 13-10-2018 RPIT_05425 839201fc314229a2e2ba9f0f1b9de257 313 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 15 270 1.1E-71 T 13-10-2018 IPR014145 DNA ligase D, polymerase domain RPIT_08100 5a27dddfbadda63daa468a889bc68069 238 SUPERFAMILY SSF53335 54 235 9.14E-21 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_08100 5a27dddfbadda63daa468a889bc68069 238 PIRSF PIRSF005578 1 238 2.2E-79 T 13-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 RPIT_08100 5a27dddfbadda63daa468a889bc68069 238 Pfam PF01728 FtsJ-like methyltransferase 55 234 1.6E-21 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 RPIT_08100 5a27dddfbadda63daa468a889bc68069 238 SMART SM00363 1 64 1.7E-9 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_08100 5a27dddfbadda63daa468a889bc68069 238 Gene3D G3DSA:3.40.50.150 49 238 2.2E-66 T 13-10-2018 RPIT_08100 5a27dddfbadda63daa468a889bc68069 238 Gene3D G3DSA:3.10.290.10 1 48 1.8E-9 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 RPIT_08100 5a27dddfbadda63daa468a889bc68069 238 Pfam PF01479 S4 domain 1 46 2.3E-11 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_08100 5a27dddfbadda63daa468a889bc68069 238 SUPERFAMILY SSF55174 1 49 1.06E-10 T 13-10-2018 RPIT_11445 47d862eca18391a0e75964269d9e711b 250 SUPERFAMILY SSF100950 72 232 1.05E-26 T 13-10-2018 IPR037171 NagB/RpiA transferase-like RPIT_11445 47d862eca18391a0e75964269d9e711b 250 Gene3D G3DSA:1.10.10.10 1 57 4.2E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_11445 47d862eca18391a0e75964269d9e711b 250 SUPERFAMILY SSF46785 7 61 4.51E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_11445 47d862eca18391a0e75964269d9e711b 250 SMART SM01134 71 232 3.0E-61 T 13-10-2018 RPIT_11445 47d862eca18391a0e75964269d9e711b 250 SMART SM00420 8 60 6.5E-12 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIT_11445 47d862eca18391a0e75964269d9e711b 250 Pfam PF08220 DeoR-like helix-turn-helix domain 8 59 1.6E-13 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIT_11445 47d862eca18391a0e75964269d9e711b 250 Pfam PF00455 DeoR C terminal sensor domain 73 230 5.0E-47 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain RPIT_00790 ce05c085997c9d2717c6ebcec51cf2a6 445 Pfam PF00144 Beta-lactamase 157 422 1.8E-26 T 13-10-2018 IPR001466 Beta-lactamase-related RPIT_00790 ce05c085997c9d2717c6ebcec51cf2a6 445 Gene3D G3DSA:3.40.710.10 134 435 1.1E-59 T 13-10-2018 RPIT_00790 ce05c085997c9d2717c6ebcec51cf2a6 445 SUPERFAMILY SSF56601 101 441 3.26E-64 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like RPIT_06685 0179d25854cde5c64199fbd4bddde9e0 180 Hamap MF_01398 ATP synthase subunit b [atpF]. 13 154 11.886 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RPIT_06685 0179d25854cde5c64199fbd4bddde9e0 180 SUPERFAMILY SSF81573 79 137 2.22E-12 T 13-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily RPIT_06685 0179d25854cde5c64199fbd4bddde9e0 180 Pfam PF00430 ATP synthase B/B' CF(0) 29 152 1.1E-21 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RPIT_06685 0179d25854cde5c64199fbd4bddde9e0 180 Gene3D G3DSA:1.20.5.620 78 138 5.4E-9 T 13-10-2018 RPIT_06685 0179d25854cde5c64199fbd4bddde9e0 180 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 29 173 4.9E-24 T 13-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 RPIT_04350 d804624d81ba15d0f3f935c8edd88e4a 109 SUPERFAMILY SSF50022 3 103 1.13E-26 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 RPIT_04350 d804624d81ba15d0f3f935c8edd88e4a 109 Pfam PF00355 Rieske [2Fe-2S] domain 3 89 2.2E-17 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIT_04350 d804624d81ba15d0f3f935c8edd88e4a 109 Gene3D G3DSA:2.102.10.10 1 107 1.2E-30 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 RPIT_00445 701d1e6c235eecf800c1ab4e7d446023 553 SUPERFAMILY SSF51011 468 547 1.05E-8 T 13-10-2018 RPIT_00445 701d1e6c235eecf800c1ab4e7d446023 553 Gene3D G3DSA:3.90.400.10 108 177 3.4E-180 T 13-10-2018 RPIT_00445 701d1e6c235eecf800c1ab4e7d446023 553 SMART SM00642 18 459 1.8E-78 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_00445 701d1e6c235eecf800c1ab4e7d446023 553 Pfam PF00128 Alpha amylase, catalytic domain 33 389 4.4E-70 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_00445 701d1e6c235eecf800c1ab4e7d446023 553 Gene3D G3DSA:3.20.20.80 10 462 3.4E-180 T 13-10-2018 RPIT_00445 701d1e6c235eecf800c1ab4e7d446023 553 Gene3D G3DSA:2.60.40.1180 468 548 3.7E-9 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta RPIT_00445 701d1e6c235eecf800c1ab4e7d446023 553 SUPERFAMILY SSF51445 9 465 2.77E-113 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_02085 4e6e6fbea8fc4527766b9702f03992a5 423 SUPERFAMILY SSF53850 54 419 3.59E-65 T 13-10-2018 RPIT_02085 4e6e6fbea8fc4527766b9702f03992a5 423 Gene3D G3DSA:3.40.190.10 165 414 2.0E-90 T 13-10-2018 RPIT_02085 4e6e6fbea8fc4527766b9702f03992a5 423 Pfam PF13416 Bacterial extracellular solute-binding protein 76 361 1.7E-41 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein RPIT_02085 4e6e6fbea8fc4527766b9702f03992a5 423 Gene3D G3DSA:3.40.190.10 70 382 2.0E-90 T 13-10-2018 RPIT_05720 896bfc39b767c85bcd37e296c66f3021 110 Pfam PF06947 Protein of unknown function (DUF1290) 22 108 9.9E-31 T 13-10-2018 IPR009709 Protein of unknown function DUF1290 RPIT_05720 896bfc39b767c85bcd37e296c66f3021 110 PIRSF PIRSF018579 1 110 6.5E-41 T 13-10-2018 IPR009709 Protein of unknown function DUF1290 RPIT_10980 670c65ea9a9576437cdb927908029884 252 SMART SM00382 36 224 8.6E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_10980 670c65ea9a9576437cdb927908029884 252 SUPERFAMILY SSF52540 7 227 6.48E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10980 670c65ea9a9576437cdb927908029884 252 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_10980 670c65ea9a9576437cdb927908029884 252 Pfam PF00005 ABC transporter 27 176 9.5E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_10980 670c65ea9a9576437cdb927908029884 252 Gene3D G3DSA:3.40.50.300 5 250 2.3E-61 T 13-10-2018 RPIT_03915 28f811c5233d65cbcc713a94487f8270 394 Gene3D G3DSA:3.40.50.2000 198 361 2.9E-34 T 13-10-2018 RPIT_03915 28f811c5233d65cbcc713a94487f8270 394 SUPERFAMILY SSF53756 13 366 7.71E-55 T 13-10-2018 RPIT_03915 28f811c5233d65cbcc713a94487f8270 394 Pfam PF13692 Glycosyl transferases group 1 196 336 4.4E-25 T 13-10-2018 RPIT_03915 28f811c5233d65cbcc713a94487f8270 394 Gene3D G3DSA:3.40.50.2000 1 197 2.2E-15 T 13-10-2018 RPIT_03915 28f811c5233d65cbcc713a94487f8270 394 Pfam PF13439 Glycosyltransferase Family 4 19 185 8.1E-14 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RPIT_04630 8aca1673b92782dc62595d8244f6ab8a 87 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 87 1.0E-37 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_04630 8aca1673b92782dc62595d8244f6ab8a 87 ProSitePatterns PS00362 Ribosomal protein S15 signature. 37 67 - T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_04630 8aca1673b92782dc62595d8244f6ab8a 87 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 8 86 1.0E-35 T 13-10-2018 RPIT_04630 8aca1673b92782dc62595d8244f6ab8a 87 SUPERFAMILY SSF47060 3 87 1.29E-33 T 13-10-2018 IPR009068 S15/NS1, RNA-binding RPIT_04630 8aca1673b92782dc62595d8244f6ab8a 87 Gene3D G3DSA:1.10.287.10 1 87 1.7E-33 T 13-10-2018 RPIT_04630 8aca1673b92782dc62595d8244f6ab8a 87 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 87 21.376 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_04630 8aca1673b92782dc62595d8244f6ab8a 87 SMART SM01387 6 86 2.1E-49 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_04630 8aca1673b92782dc62595d8244f6ab8a 87 Pfam PF00312 Ribosomal protein S15 6 86 8.4E-37 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_01920 ec4710d9defc51f99eb97a9cd1d43417 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 33 75 5.4E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_01920 ec4710d9defc51f99eb97a9cd1d43417 211 Gene3D G3DSA:1.10.357.10 15 211 1.5E-28 T 13-10-2018 RPIT_01920 ec4710d9defc51f99eb97a9cd1d43417 211 SUPERFAMILY SSF46689 18 99 1.37E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_01920 ec4710d9defc51f99eb97a9cd1d43417 211 SUPERFAMILY SSF48498 97 197 1.33E-7 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RPIT_07475 826af347852e3e4807034b5b2106eeec 200 Gene3D G3DSA:2.60.40.3700 38 199 1.3E-53 T 13-10-2018 RPIT_00355 edebeaf9f04b1db95434cad14c1cbebd 325 SMART SM00861 5 180 2.9E-67 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RPIT_00355 edebeaf9f04b1db95434cad14c1cbebd 325 Gene3D G3DSA:3.40.50.920 199 321 9.1E-40 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 RPIT_00355 edebeaf9f04b1db95434cad14c1cbebd 325 SUPERFAMILY SSF52922 191 323 7.59E-36 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 RPIT_00355 edebeaf9f04b1db95434cad14c1cbebd 325 Gene3D G3DSA:3.40.50.970 1 198 1.0E-75 T 13-10-2018 RPIT_00355 edebeaf9f04b1db95434cad14c1cbebd 325 SUPERFAMILY SSF52518 4 183 1.23E-64 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_00355 edebeaf9f04b1db95434cad14c1cbebd 325 Pfam PF02779 Transketolase, pyrimidine binding domain 4 179 2.2E-44 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RPIT_00355 edebeaf9f04b1db95434cad14c1cbebd 325 Pfam PF02780 Transketolase, C-terminal domain 195 315 4.6E-34 T 13-10-2018 IPR033248 Transketolase, C-terminal domain RPIT_02005 600c30b736a8d787edcb5dc98ceb73c0 834 SUPERFAMILY SSF63737 5 197 3.4E-36 T 13-10-2018 RPIT_02005 600c30b736a8d787edcb5dc98ceb73c0 834 Gene3D G3DSA:2.60.40.1730 74 198 3.3E-24 T 13-10-2018 RPIT_02005 600c30b736a8d787edcb5dc98ceb73c0 834 TIGRFAM TIGR02412 pepN_strep_liv: aminopeptidase N 5 823 1.1E-252 T 13-10-2018 IPR012778 Peptidase M1, aminopeptidase GO:0004177|GO:0006508 KEGG: 00480+3.4.11.2 RPIT_02005 600c30b736a8d787edcb5dc98ceb73c0 834 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 132 147 1.1E-17 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIT_02005 600c30b736a8d787edcb5dc98ceb73c0 834 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 180 195 1.1E-17 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIT_02005 600c30b736a8d787edcb5dc98ceb73c0 834 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 1.1E-17 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIT_02005 600c30b736a8d787edcb5dc98ceb73c0 834 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 259 269 1.1E-17 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIT_02005 600c30b736a8d787edcb5dc98ceb73c0 834 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 1.1E-17 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIT_02005 600c30b736a8d787edcb5dc98ceb73c0 834 Pfam PF11838 ERAP1-like C-terminal domain 525 812 9.0E-36 T 13-10-2018 IPR024571 ERAP1-like C-terminal domain RPIT_02005 600c30b736a8d787edcb5dc98ceb73c0 834 SUPERFAMILY SSF55486 210 450 2.2E-67 T 13-10-2018 RPIT_02005 600c30b736a8d787edcb5dc98ceb73c0 834 Gene3D G3DSA:1.10.390.60 201 446 1.2E-63 T 13-10-2018 RPIT_02005 600c30b736a8d787edcb5dc98ceb73c0 834 Pfam PF01433 Peptidase family M1 domain 230 441 1.5E-50 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIT_11025 3b22ad2efb1cf809db366d9808f38226 430 SMART SM00852 207 346 2.8E-18 T 13-10-2018 IPR001453 MoaB/Mog domain RPIT_11025 3b22ad2efb1cf809db366d9808f38226 430 SUPERFAMILY SSF63867 356 428 3.01E-9 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RPIT_11025 3b22ad2efb1cf809db366d9808f38226 430 Pfam PF03453 MoeA N-terminal region (domain I and II) 37 194 3.4E-25 T 13-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RPIT_11025 3b22ad2efb1cf809db366d9808f38226 430 Gene3D G3DSA:2.40.340.10 355 422 3.8E-83 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RPIT_11025 3b22ad2efb1cf809db366d9808f38226 430 Pfam PF03454 MoeA C-terminal region (domain IV) 359 427 2.8E-10 T 13-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RPIT_11025 3b22ad2efb1cf809db366d9808f38226 430 Gene3D G3DSA:2.170.190.11 78 168 3.8E-83 T 13-10-2018 RPIT_11025 3b22ad2efb1cf809db366d9808f38226 430 Pfam PF00994 Probable molybdopterin binding domain 219 345 1.7E-12 T 13-10-2018 IPR001453 MoaB/Mog domain RPIT_11025 3b22ad2efb1cf809db366d9808f38226 430 Gene3D G3DSA:3.90.105.10 58 201 3.8E-83 T 13-10-2018 RPIT_11025 3b22ad2efb1cf809db366d9808f38226 430 Gene3D G3DSA:3.40.980.10 202 354 3.8E-83 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily RPIT_11025 3b22ad2efb1cf809db366d9808f38226 430 SUPERFAMILY SSF63882 35 203 3.92E-31 T 13-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RPIT_11025 3b22ad2efb1cf809db366d9808f38226 430 SUPERFAMILY SSF53218 204 350 2.62E-25 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily RPIT_02420 02e7a937b2a772220b53f72e009cc9dc 318 SUPERFAMILY SSF53474 37 314 3.78E-28 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_02420 02e7a937b2a772220b53f72e009cc9dc 318 Pfam PF12146 Serine aminopeptidase, S33 45 247 5.4E-20 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 RPIT_02420 02e7a937b2a772220b53f72e009cc9dc 318 Gene3D G3DSA:3.40.50.1820 23 315 1.4E-37 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_07295 2db56579aeccdd5d6f0bd15dde17e9ce 179 Gene3D G3DSA:3.30.70.100 1 39 2.6E-6 T 13-10-2018 RPIT_07295 2db56579aeccdd5d6f0bd15dde17e9ce 179 SUPERFAMILY SSF55008 1 40 1.26E-6 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 RPIT_12795 65566c1aaf8611c77485b28d342e67dd 287 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 7 276 1.1E-90 T 13-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 RPIT_12795 65566c1aaf8611c77485b28d342e67dd 287 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 19 109 1.7E-24 T 13-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 RPIT_12795 65566c1aaf8611c77485b28d342e67dd 287 Gene3D G3DSA:3.20.20.70 115 268 6.1E-98 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_12795 65566c1aaf8611c77485b28d342e67dd 287 PIRSF PIRSF006250 1 279 5.7E-89 T 13-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 RPIT_12795 65566c1aaf8611c77485b28d342e67dd 287 Gene3D G3DSA:3.90.1170.20 11 275 6.1E-98 T 13-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 RPIT_12795 65566c1aaf8611c77485b28d342e67dd 287 SUPERFAMILY SSF54675 3 110 3.14E-27 T 13-10-2018 RPIT_12795 65566c1aaf8611c77485b28d342e67dd 287 SUPERFAMILY SSF51690 111 277 3.92E-54 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 RPIT_12795 65566c1aaf8611c77485b28d342e67dd 287 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 111 276 7.2E-55 T 13-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 RPIT_12645 040cfb9a51408bb2a0930b50e757d894 332 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 304 9.1E-74 T 13-10-2018 IPR016040 NAD(P)-binding domain RPIT_12645 040cfb9a51408bb2a0930b50e757d894 332 Gene3D G3DSA:3.40.50.720 5 299 3.5E-114 T 13-10-2018 RPIT_12645 040cfb9a51408bb2a0930b50e757d894 332 SUPERFAMILY SSF51735 3 323 7.11E-88 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_12645 040cfb9a51408bb2a0930b50e757d894 332 Gene3D G3DSA:3.90.25.10 185 312 3.5E-114 T 13-10-2018 RPIT_12645 040cfb9a51408bb2a0930b50e757d894 332 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 319 3.7E-134 T 13-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 RPIT_00550 11d13c95b9ff32dcf8840e5d3b462bd2 408 SUPERFAMILY SSF52413 296 407 3.27E-26 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 RPIT_00550 11d13c95b9ff32dcf8840e5d3b462bd2 408 SUPERFAMILY SSF48179 199 292 2.21E-28 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 RPIT_00550 11d13c95b9ff32dcf8840e5d3b462bd2 408 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 309 407 1.4E-20 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_00550 11d13c95b9ff32dcf8840e5d3b462bd2 408 Gene3D G3DSA:3.40.50.720 198 408 1.7E-60 T 13-10-2018 RPIT_00550 11d13c95b9ff32dcf8840e5d3b462bd2 408 PIRSF PIRSF500136 1 408 1.2E-142 T 13-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 RPIT_00550 11d13c95b9ff32dcf8840e5d3b462bd2 408 SMART SM00984 309 408 2.2E-22 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_00550 11d13c95b9ff32dcf8840e5d3b462bd2 408 Gene3D G3DSA:3.40.50.720 1 195 4.3E-62 T 13-10-2018 RPIT_00550 11d13c95b9ff32dcf8840e5d3b462bd2 408 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 405 5.1E-123 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RPIT_00550 11d13c95b9ff32dcf8840e5d3b462bd2 408 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 199 286 9.4E-27 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_00550 11d13c95b9ff32dcf8840e5d3b462bd2 408 SUPERFAMILY SSF51735 6 193 5.0E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_00550 11d13c95b9ff32dcf8840e5d3b462bd2 408 PIRSF PIRSF000124 4 408 9.6E-79 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RPIT_00550 11d13c95b9ff32dcf8840e5d3b462bd2 408 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 6 181 5.9E-51 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_00020 587a6b6aa689295ad2b8a3f88949ab7a 303 Pfam PF01925 Sulfite exporter TauE/SafE 9 246 1.7E-34 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIT_10560 eff50649f549d33484888fa307f3f5c4 298 Gene3D G3DSA:3.40.50.10320 7 290 1.1E-77 T 13-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 RPIT_10560 eff50649f549d33484888fa307f3f5c4 298 TIGRFAM TIGR03446 mycothiol_Mca: mycothiol conjugate amidase Mca 9 287 2.3E-130 T 13-10-2018 IPR017811 Mycothiol S-conjugate amidase Mca GO:0010126 RPIT_10560 eff50649f549d33484888fa307f3f5c4 298 Hamap MF_01482 Mycothiol S-conjugate amidase [mca]. 12 288 50.177 T 13-10-2018 IPR017811 Mycothiol S-conjugate amidase Mca GO:0010126 RPIT_10560 eff50649f549d33484888fa307f3f5c4 298 Pfam PF02585 GlcNAc-PI de-N-acetylase 13 159 1.2E-25 T 13-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 RPIT_10560 eff50649f549d33484888fa307f3f5c4 298 SUPERFAMILY SSF102588 8 288 2.75E-70 T 13-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 RPIT_03125 c926aaefafc28bd3563dc6b6726b86df 448 Gene3D G3DSA:2.40.37.10 300 446 4.9E-14 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RPIT_03125 c926aaefafc28bd3563dc6b6726b86df 448 SUPERFAMILY SSF50621 308 421 2.3E-10 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RPIT_03125 c926aaefafc28bd3563dc6b6726b86df 448 SUPERFAMILY SSF51419 44 327 1.64E-39 T 13-10-2018 IPR029066 PLP-binding barrel RPIT_03125 c926aaefafc28bd3563dc6b6726b86df 448 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 225 240 - T 13-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RPIT_03125 c926aaefafc28bd3563dc6b6726b86df 448 Gene3D G3DSA:3.20.20.10 48 266 1.3E-45 T 13-10-2018 IPR029066 PLP-binding barrel RPIT_03125 c926aaefafc28bd3563dc6b6726b86df 448 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 65 249 1.5E-25 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 RPIT_03125 c926aaefafc28bd3563dc6b6726b86df 448 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 70 88 - T 13-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site RPIT_03125 c926aaefafc28bd3563dc6b6726b86df 448 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 90 102 1.0E-7 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RPIT_03125 c926aaefafc28bd3563dc6b6726b86df 448 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 1.0E-7 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RPIT_03125 c926aaefafc28bd3563dc6b6726b86df 448 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 314 333 1.0E-7 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RPIT_03125 c926aaefafc28bd3563dc6b6726b86df 448 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 70 88 1.0E-7 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RPIT_09735 acdf3837e9820ee4c194d3da6f3dbeb6 282 Hamap MF_00042 Ribonuclease H [rnhA]. 1 145 25.325 T 13-10-2018 IPR022892 Ribonuclease HI GO:0004523 RPIT_09735 acdf3837e9820ee4c194d3da6f3dbeb6 282 Gene3D G3DSA:3.30.420.10 1 148 1.6E-45 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 RPIT_09735 acdf3837e9820ee4c194d3da6f3dbeb6 282 SUPERFAMILY SSF53098 2 138 1.52E-39 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily RPIT_09735 acdf3837e9820ee4c194d3da6f3dbeb6 282 Pfam PF00075 RNase H 6 136 2.8E-30 T 13-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 RPIT_14875 3d7caed4010e290afc93c983af0b29b2 416 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 294 2.4E-14 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIT_14875 3d7caed4010e290afc93c983af0b29b2 416 Gene3D G3DSA:3.50.50.60 5 312 4.7E-84 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_14875 3d7caed4010e290afc93c983af0b29b2 416 SUPERFAMILY SSF51905 119 250 2.19E-29 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_14875 3d7caed4010e290afc93c983af0b29b2 416 Gene3D G3DSA:3.50.50.60 109 259 4.7E-84 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_14875 3d7caed4010e290afc93c983af0b29b2 416 SUPERFAMILY SSF51905 3 151 6.08E-24 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_07345 bf0f8f34d294ed50c425d8e727ce13fb 148 Pfam PF13377 Periplasmic binding protein-like domain 23 142 1.0E-17 T 13-10-2018 RPIT_07345 bf0f8f34d294ed50c425d8e727ce13fb 148 SUPERFAMILY SSF53822 36 145 7.26E-20 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_07345 bf0f8f34d294ed50c425d8e727ce13fb 148 Gene3D G3DSA:3.40.50.2300 25 98 5.3E-22 T 13-10-2018 RPIT_07345 bf0f8f34d294ed50c425d8e727ce13fb 148 Gene3D G3DSA:3.40.50.2300 99 114 5.3E-22 T 13-10-2018 RPIT_07980 e472d701c342eed4ae78a2d52695c8d9 130 PRINTS PR00332 Histidine triad family signature 4 20 1.8E-17 T 13-10-2018 IPR001310 Histidine triad (HIT) protein RPIT_07980 e472d701c342eed4ae78a2d52695c8d9 130 PRINTS PR00332 Histidine triad family signature 25 43 1.8E-17 T 13-10-2018 IPR001310 Histidine triad (HIT) protein RPIT_07980 e472d701c342eed4ae78a2d52695c8d9 130 PRINTS PR00332 Histidine triad family signature 91 101 1.8E-17 T 13-10-2018 IPR001310 Histidine triad (HIT) protein RPIT_07980 e472d701c342eed4ae78a2d52695c8d9 130 SUPERFAMILY SSF54197 1 111 1.25E-36 T 13-10-2018 IPR036265 HIT-like superfamily RPIT_07980 e472d701c342eed4ae78a2d52695c8d9 130 Pfam PF01230 HIT domain 11 103 1.4E-22 T 13-10-2018 IPR001310 Histidine triad (HIT) protein RPIT_07980 e472d701c342eed4ae78a2d52695c8d9 130 Gene3D G3DSA:3.30.428.10 1 130 6.5E-38 T 13-10-2018 IPR036265 HIT-like superfamily RPIT_02380 3967ade05ead652431a1a52732d35bd8 482 SUPERFAMILY SSF56235 17 276 2.57E-64 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal RPIT_02380 3967ade05ead652431a1a52732d35bd8 482 Gene3D G3DSA:3.40.50.2020 283 447 1.4E-147 T 13-10-2018 RPIT_02380 3967ade05ead652431a1a52732d35bd8 482 Pfam PF13522 Glutamine amidotransferase domain 77 218 5.7E-15 T 13-10-2018 RPIT_02380 3967ade05ead652431a1a52732d35bd8 482 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 16 464 45.783 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 RPIT_02380 3967ade05ead652431a1a52732d35bd8 482 PIRSF PIRSF000485 13 478 2.0E-158 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 RPIT_02380 3967ade05ead652431a1a52732d35bd8 482 Pfam PF00156 Phosphoribosyl transferase domain 294 394 9.0E-7 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIT_02380 3967ade05ead652431a1a52732d35bd8 482 SUPERFAMILY SSF53271 259 470 4.59E-68 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like RPIT_02380 3967ade05ead652431a1a52732d35bd8 482 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 17 465 3.8E-153 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 RPIT_02380 3967ade05ead652431a1a52732d35bd8 482 Gene3D G3DSA:3.60.20.10 17 466 1.4E-147 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal RPIT_09020 95d12ebbc7cdb9577d4c38f72a33432c 559 SMART SM00382 348 518 9.6E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_09020 95d12ebbc7cdb9577d4c38f72a33432c 559 SMART SM00382 30 237 2.2E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_09020 95d12ebbc7cdb9577d4c38f72a33432c 559 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_09020 95d12ebbc7cdb9577d4c38f72a33432c 559 Gene3D G3DSA:3.40.50.300 286 558 9.0E-63 T 13-10-2018 RPIT_09020 95d12ebbc7cdb9577d4c38f72a33432c 559 Pfam PF00005 ABC transporter 21 190 4.4E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_09020 95d12ebbc7cdb9577d4c38f72a33432c 559 Pfam PF00005 ABC transporter 340 473 4.5E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_09020 95d12ebbc7cdb9577d4c38f72a33432c 559 Gene3D G3DSA:3.40.50.300 2 284 1.2E-78 T 13-10-2018 RPIT_09020 95d12ebbc7cdb9577d4c38f72a33432c 559 Pfam PF12848 ABC transporter 229 302 1.4E-13 T 13-10-2018 IPR032781 ABC-transporter extension domain RPIT_09020 95d12ebbc7cdb9577d4c38f72a33432c 559 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 557 5.5E-271 T 13-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 RPIT_09020 95d12ebbc7cdb9577d4c38f72a33432c 559 SUPERFAMILY SSF52540 309 509 3.25E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_09020 95d12ebbc7cdb9577d4c38f72a33432c 559 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_09020 95d12ebbc7cdb9577d4c38f72a33432c 559 SUPERFAMILY SSF52540 8 243 6.58E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_00740 9bf80ad047d83339a3576f4989666be5 322 Gene3D G3DSA:2.40.50.140 197 318 4.3E-23 T 13-10-2018 RPIT_00740 9bf80ad047d83339a3576f4989666be5 322 Gene3D G3DSA:3.30.1490.70 16 190 3.0E-49 T 13-10-2018 RPIT_00740 9bf80ad047d83339a3576f4989666be5 322 Gene3D G3DSA:3.30.470.30 29 149 3.0E-49 T 13-10-2018 RPIT_00740 9bf80ad047d83339a3576f4989666be5 322 Pfam PF01068 ATP dependent DNA ligase domain 3 190 6.4E-25 T 13-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 RPIT_00740 9bf80ad047d83339a3576f4989666be5 322 SUPERFAMILY SSF50249 199 319 5.14E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_00740 9bf80ad047d83339a3576f4989666be5 322 Pfam PF04679 ATP dependent DNA ligase C terminal region 212 311 1.6E-14 T 13-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 RPIT_00740 9bf80ad047d83339a3576f4989666be5 322 SUPERFAMILY SSF56091 2 190 5.76E-41 T 13-10-2018 RPIT_00740 9bf80ad047d83339a3576f4989666be5 322 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 14 314 8.5E-70 T 13-10-2018 IPR014146 DNA ligase D, ligase domain RPIT_11045 a8e32f4ca10fe669cb9464c16ce7291d 122 Gene3D G3DSA:1.10.1200.120 1 120 4.6E-26 T 13-10-2018 IPR036019 Gated mechanosensitive channel RPIT_11045 a8e32f4ca10fe669cb9464c16ce7291d 122 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 116 1.4E-26 T 13-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L RPIT_11045 a8e32f4ca10fe669cb9464c16ce7291d 122 SUPERFAMILY SSF81330 9 113 2.88E-18 T 13-10-2018 IPR036019 Gated mechanosensitive channel RPIT_07045 5f5c100cd3108f21f8188b17b549cefa 465 Gene3D G3DSA:3.40.50.11060 57 179 4.2E-40 T 13-10-2018 RPIT_07045 5f5c100cd3108f21f8188b17b549cefa 465 Gene3D G3DSA:3.40.50.300 245 412 1.4E-43 T 13-10-2018 RPIT_07045 5f5c100cd3108f21f8188b17b549cefa 465 SUPERFAMILY SSF52540 247 427 6.17E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_07045 5f5c100cd3108f21f8188b17b549cefa 465 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 49 406 1.6E-138 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 RPIT_07045 5f5c100cd3108f21f8188b17b549cefa 465 Hamap MF_00900 GTPase HflX [hflX]. 68 436 49.861 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 RPIT_07045 5f5c100cd3108f21f8188b17b549cefa 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 315 333 2.1E-7 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_07045 5f5c100cd3108f21f8188b17b549cefa 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 248 268 2.1E-7 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_07045 5f5c100cd3108f21f8188b17b549cefa 465 Pfam PF13167 GTP-binding GTPase N-terminal 66 153 1.3E-33 T 13-10-2018 IPR025121 GTPase HflX, N-terminal RPIT_07045 5f5c100cd3108f21f8188b17b549cefa 465 Pfam PF01926 50S ribosome-binding GTPase 248 366 2.6E-21 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_07045 5f5c100cd3108f21f8188b17b549cefa 465 PIRSF PIRSF006809 11 48 120.0 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 RPIT_07045 5f5c100cd3108f21f8188b17b549cefa 465 PIRSF PIRSF006809 40 464 8.3E-158 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 RPIT_07045 5f5c100cd3108f21f8188b17b549cefa 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 247 404 5.6E-12 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RPIT_07045 5f5c100cd3108f21f8188b17b549cefa 465 Pfam PF16360 GTP-binding GTPase Middle Region 155 240 1.0E-26 T 13-10-2018 IPR032305 GTP-binding protein, middle domain RPIT_01945 f9f92f98583e5722dcc4c41539fa8562 476 PRINTS PR00149 Fumarate lyase superfamily signature 98 116 1.7E-9 T 13-10-2018 IPR000362 Fumarate lyase family RPIT_01945 f9f92f98583e5722dcc4c41539fa8562 476 PRINTS PR00149 Fumarate lyase superfamily signature 143 161 1.7E-9 T 13-10-2018 IPR000362 Fumarate lyase family RPIT_01945 f9f92f98583e5722dcc4c41539fa8562 476 PRINTS PR00149 Fumarate lyase superfamily signature 280 296 1.7E-9 T 13-10-2018 IPR000362 Fumarate lyase family RPIT_01945 f9f92f98583e5722dcc4c41539fa8562 476 PRINTS PR00149 Fumarate lyase superfamily signature 237 264 1.7E-9 T 13-10-2018 IPR000362 Fumarate lyase family RPIT_01945 f9f92f98583e5722dcc4c41539fa8562 476 Gene3D G3DSA:1.10.275.60 21 234 9.7E-136 T 13-10-2018 RPIT_01945 f9f92f98583e5722dcc4c41539fa8562 476 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 7 453 3.6E-122 T 13-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RPIT_01945 f9f92f98583e5722dcc4c41539fa8562 476 Gene3D G3DSA:1.10.40.30 367 442 9.7E-136 T 13-10-2018 RPIT_01945 f9f92f98583e5722dcc4c41539fa8562 476 SUPERFAMILY SSF48557 6 455 2.2E-82 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 RPIT_01945 f9f92f98583e5722dcc4c41539fa8562 476 Pfam PF10397 Adenylosuccinate lyase C-terminus 370 452 2.8E-13 T 13-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RPIT_01945 f9f92f98583e5722dcc4c41539fa8562 476 Gene3D G3DSA:1.20.200.10 10 451 9.7E-136 T 13-10-2018 RPIT_01945 f9f92f98583e5722dcc4c41539fa8562 476 ProSitePatterns PS00163 Fumarate lyases signature. 280 289 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 RPIT_01945 f9f92f98583e5722dcc4c41539fa8562 476 Pfam PF00206 Lyase 32 301 2.1E-19 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal RPIT_01945 f9f92f98583e5722dcc4c41539fa8562 476 SMART SM00998 369 454 8.3E-18 T 13-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RPIT_04575 2a146ae6ce589051fef34e4e7a6ceb21 324 SUPERFAMILY SSF54814 256 319 7.19E-16 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 RPIT_04575 2a146ae6ce589051fef34e4e7a6ceb21 324 SUPERFAMILY SSF69705 3 99 2.35E-29 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 RPIT_04575 2a146ae6ce589051fef34e4e7a6ceb21 324 Gene3D G3DSA:3.30.1480.10 1 99 2.3E-33 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 RPIT_04575 2a146ae6ce589051fef34e4e7a6ceb21 324 Gene3D G3DSA:2.40.50.140 105 175 6.3E-24 T 13-10-2018 RPIT_04575 2a146ae6ce589051fef34e4e7a6ceb21 324 Pfam PF08529 NusA N-terminal domain 6 59 5.2E-11 T 13-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RPIT_04575 2a146ae6ce589051fef34e4e7a6ceb21 324 Pfam PF08529 NusA N-terminal domain 73 100 7.4E-7 T 13-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RPIT_04575 2a146ae6ce589051fef34e4e7a6ceb21 324 Gene3D G3DSA:3.30.300.20 255 323 7.3E-28 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta RPIT_04575 2a146ae6ce589051fef34e4e7a6ceb21 324 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 322 25.136 T 13-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 RPIT_04575 2a146ae6ce589051fef34e4e7a6ceb21 324 Gene3D G3DSA:3.30.300.20 176 254 9.2E-31 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta RPIT_04575 2a146ae6ce589051fef34e4e7a6ceb21 324 SUPERFAMILY SSF50249 110 176 5.9E-14 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_04575 2a146ae6ce589051fef34e4e7a6ceb21 324 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 76 319 5.7E-95 T 13-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 RPIT_04575 2a146ae6ce589051fef34e4e7a6ceb21 324 Pfam PF13184 NusA-like KH domain 207 275 1.9E-25 T 13-10-2018 IPR025249 KH domain, NusA-like GO:0003723 RPIT_04575 2a146ae6ce589051fef34e4e7a6ceb21 324 SUPERFAMILY SSF54814 177 255 1.96E-26 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 RPIT_13050 57d5f8ff444719a67ac6dca40491c619 323 Gene3D G3DSA:2.60.200.40 137 307 1.5E-40 T 13-10-2018 RPIT_13050 57d5f8ff444719a67ac6dca40491c619 323 Gene3D G3DSA:3.40.50.10330 1 136 4.7E-25 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 RPIT_13050 57d5f8ff444719a67ac6dca40491c619 323 SUPERFAMILY SSF111331 1 319 8.01E-61 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily RPIT_13050 57d5f8ff444719a67ac6dca40491c619 323 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 123 5.9E-17 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 RPIT_00225 0806c55accb3999c077563c257ad4eaa 412 Pfam PF00872 Transposase, Mutator family 6 382 6.6E-152 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIT_03150 45a2749f6f0564c5a2b6a32990803da7 208 Pfam PF00673 ribosomal L5P family C-terminus 93 186 1.5E-38 T 13-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03150 45a2749f6f0564c5a2b6a32990803da7 208 PIRSF PIRSF002161 6 195 2.1E-63 T 13-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03150 45a2749f6f0564c5a2b6a32990803da7 208 Pfam PF00281 Ribosomal protein L5 33 89 2.0E-28 T 13-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03150 45a2749f6f0564c5a2b6a32990803da7 208 SUPERFAMILY SSF55282 12 187 6.83E-76 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03150 45a2749f6f0564c5a2b6a32990803da7 208 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 10 188 43.769 T 13-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03150 45a2749f6f0564c5a2b6a32990803da7 208 Gene3D G3DSA:3.30.1440.10 8 188 5.9E-78 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03150 45a2749f6f0564c5a2b6a32990803da7 208 ProSitePatterns PS00358 Ribosomal protein L5 signature. 66 82 - T 13-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_01875 e4b20483e7e153b492e47b7682057f10 427 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 427 191.264 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RPIT_01875 e4b20483e7e153b492e47b7682057f10 427 Gene3D G3DSA:1.10.300.10 106 205 1.1E-92 T 13-10-2018 RPIT_01875 e4b20483e7e153b492e47b7682057f10 427 Gene3D G3DSA:3.90.170.10 265 427 4.2E-67 T 13-10-2018 RPIT_01875 e4b20483e7e153b492e47b7682057f10 427 SMART SM00788 3 422 4.0E-266 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RPIT_01875 e4b20483e7e153b492e47b7682057f10 427 Gene3D G3DSA:3.40.440.10 5 257 1.1E-92 T 13-10-2018 RPIT_01875 e4b20483e7e153b492e47b7682057f10 427 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 13-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RPIT_01875 e4b20483e7e153b492e47b7682057f10 427 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 425 1.5E-160 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RPIT_01875 e4b20483e7e153b492e47b7682057f10 427 SUPERFAMILY SSF52540 1 425 1.27E-166 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01875 e4b20483e7e153b492e47b7682057f10 427 Pfam PF00709 Adenylosuccinate synthetase 4 420 7.2E-172 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RPIT_14285 78ef1987ed529fdfb40a1812d123609a 78 Gene3D G3DSA:1.10.1220.10 1 48 8.6E-8 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RPIT_14285 78ef1987ed529fdfb40a1812d123609a 78 SUPERFAMILY SSF47598 2 49 1.28E-10 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 RPIT_08265 57065959053d73ac4a295fe6c40eb7d1 271 SMART SM00967 35 104 3.3E-14 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 RPIT_08265 57065959053d73ac4a295fe6c40eb7d1 271 SUPERFAMILY SSF75217 93 262 5.04E-39 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases RPIT_08265 57065959053d73ac4a295fe6c40eb7d1 271 Pfam PF00588 SpoU rRNA Methylase family 113 256 3.1E-35 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RPIT_08265 57065959053d73ac4a295fe6c40eb7d1 271 Gene3D G3DSA:3.40.1280.10 109 269 1.4E-50 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIT_08265 57065959053d73ac4a295fe6c40eb7d1 271 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 35 101 8.8E-12 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 RPIT_08265 57065959053d73ac4a295fe6c40eb7d1 271 Gene3D G3DSA:3.30.1330.30 14 104 4.3E-15 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like RPIT_08265 57065959053d73ac4a295fe6c40eb7d1 271 SUPERFAMILY SSF55315 15 102 2.0E-17 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like RPIT_06235 620840c1a3f91272ea72261a891fe198 883 SUPERFAMILY SSF55186 563 709 2.75E-40 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 RPIT_06235 620840c1a3f91272ea72261a891fe198 883 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 658 702 1.5E-12 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 RPIT_06235 620840c1a3f91272ea72261a891fe198 883 Pfam PF01411 tRNA synthetases class II (A) 5 559 7.3E-176 T 13-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 RPIT_06235 620840c1a3f91272ea72261a891fe198 883 SUPERFAMILY SSF50447 460 555 8.83E-14 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily RPIT_06235 620840c1a3f91272ea72261a891fe198 883 Gene3D G3DSA:2.40.30.130 472 557 4.9E-10 T 13-10-2018 RPIT_06235 620840c1a3f91272ea72261a891fe198 883 Pfam PF02272 DHHA1 domain 738 879 3.8E-21 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 RPIT_06235 620840c1a3f91272ea72261a891fe198 883 Gene3D G3DSA:3.30.54.20 629 683 1.6E-38 T 13-10-2018 RPIT_06235 620840c1a3f91272ea72261a891fe198 883 PRINTS PR00980 Alanyl-tRNA synthetase signature 69 80 2.1E-24 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RPIT_06235 620840c1a3f91272ea72261a891fe198 883 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 2.1E-24 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RPIT_06235 620840c1a3f91272ea72261a891fe198 883 PRINTS PR00980 Alanyl-tRNA synthetase signature 195 206 2.1E-24 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RPIT_06235 620840c1a3f91272ea72261a891fe198 883 PRINTS PR00980 Alanyl-tRNA synthetase signature 228 241 2.1E-24 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RPIT_06235 620840c1a3f91272ea72261a891fe198 883 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 2.1E-24 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RPIT_06235 620840c1a3f91272ea72261a891fe198 883 SUPERFAMILY SSF101353 248 465 1.2E-53 T 13-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 RPIT_06235 620840c1a3f91272ea72261a891fe198 883 SMART SM00863 658 702 1.4E-16 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 RPIT_06235 620840c1a3f91272ea72261a891fe198 883 SUPERFAMILY SSF55681 2 247 2.98E-80 T 13-10-2018 RPIT_06235 620840c1a3f91272ea72261a891fe198 883 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 883 155.524 T 13-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 RPIT_06235 620840c1a3f91272ea72261a891fe198 883 Gene3D G3DSA:3.10.310.40 770 881 4.9E-17 T 13-10-2018 RPIT_06235 620840c1a3f91272ea72261a891fe198 883 Gene3D G3DSA:3.30.930.10 1 244 3.9E-86 T 13-10-2018 RPIT_06235 620840c1a3f91272ea72261a891fe198 883 Gene3D G3DSA:3.30.980.10 568 703 1.6E-38 T 13-10-2018 RPIT_06235 620840c1a3f91272ea72261a891fe198 883 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 862 1.1E-229 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RPIT_10320 d5bb35478e67df5d0f55a3e2e6e6671c 641 Pfam PF00999 Sodium/hydrogen exchanger family 18 422 5.8E-29 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RPIT_10320 d5bb35478e67df5d0f55a3e2e6e6671c 641 Gene3D G3DSA:3.40.50.720 433 559 8.0E-6 T 13-10-2018 RPIT_10320 d5bb35478e67df5d0f55a3e2e6e6671c 641 Gene3D G3DSA:1.20.1530.20 17 359 9.1E-16 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily RPIT_14540 de71c51ce2266abcaf9e29479c06ef8a 794 ProSitePatterns PS00211 ABC transporters family signature. 684 698 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_14540 de71c51ce2266abcaf9e29479c06ef8a 794 Pfam PF00005 ABC transporter 504 712 3.7E-11 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_14540 de71c51ce2266abcaf9e29479c06ef8a 794 Gene3D G3DSA:3.40.50.300 498 788 6.5E-107 T 13-10-2018 RPIT_14540 de71c51ce2266abcaf9e29479c06ef8a 794 Gene3D G3DSA:1.20.1580.10 580 618 6.5E-107 T 13-10-2018 RPIT_14540 de71c51ce2266abcaf9e29479c06ef8a 794 SUPERFAMILY SSF52540 21 456 4.93E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_14540 de71c51ce2266abcaf9e29479c06ef8a 794 SUPERFAMILY SSF52540 496 765 2.63E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_14540 de71c51ce2266abcaf9e29479c06ef8a 794 Gene3D G3DSA:1.10.8.280 187 295 3.4E-151 T 13-10-2018 RPIT_14540 de71c51ce2266abcaf9e29479c06ef8a 794 Gene3D G3DSA:1.20.1580.10 107 373 3.4E-151 T 13-10-2018 RPIT_14540 de71c51ce2266abcaf9e29479c06ef8a 794 Gene3D G3DSA:3.40.50.300 21 473 3.4E-151 T 13-10-2018 RPIT_05610 862b79f8c47d4a55c4699a0bdc73856c 937 Pfam PF00330 Aconitase family (aconitate hydratase) 64 601 3.4E-174 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_05610 862b79f8c47d4a55c4699a0bdc73856c 937 SUPERFAMILY SSF52016 670 933 1.1E-83 T 13-10-2018 RPIT_05610 862b79f8c47d4a55c4699a0bdc73856c 937 Gene3D G3DSA:3.20.19.10 693 936 2.2E-99 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 RPIT_05610 862b79f8c47d4a55c4699a0bdc73856c 937 SUPERFAMILY SSF53732 4 666 6.67E-217 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 RPIT_05610 862b79f8c47d4a55c4699a0bdc73856c 937 Gene3D G3DSA:1.10.1440.20 630 690 4.8E-21 T 13-10-2018 RPIT_05610 862b79f8c47d4a55c4699a0bdc73856c 937 PRINTS PR00415 Aconitase family signature 532 545 1.4E-39 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_05610 862b79f8c47d4a55c4699a0bdc73856c 937 PRINTS PR00415 Aconitase family signature 212 227 1.4E-39 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_05610 862b79f8c47d4a55c4699a0bdc73856c 937 PRINTS PR00415 Aconitase family signature 470 481 1.4E-39 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_05610 862b79f8c47d4a55c4699a0bdc73856c 937 PRINTS PR00415 Aconitase family signature 141 154 1.4E-39 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_05610 862b79f8c47d4a55c4699a0bdc73856c 937 PRINTS PR00415 Aconitase family signature 165 173 1.4E-39 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_05610 862b79f8c47d4a55c4699a0bdc73856c 937 PRINTS PR00415 Aconitase family signature 367 381 1.4E-39 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_05610 862b79f8c47d4a55c4699a0bdc73856c 937 PRINTS PR00415 Aconitase family signature 198 211 1.4E-39 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_05610 862b79f8c47d4a55c4699a0bdc73856c 937 PRINTS PR00415 Aconitase family signature 288 301 1.4E-39 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_05610 862b79f8c47d4a55c4699a0bdc73856c 937 PRINTS PR00415 Aconitase family signature 274 287 1.4E-39 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 RPIT_05610 862b79f8c47d4a55c4699a0bdc73856c 937 Pfam PF00694 Aconitase C-terminal domain 731 860 9.8E-43 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 RPIT_05610 862b79f8c47d4a55c4699a0bdc73856c 937 Gene3D G3DSA:3.30.499.20 7 367 1.3E-152 T 13-10-2018 RPIT_05610 862b79f8c47d4a55c4699a0bdc73856c 937 ProSitePatterns PS00450 Aconitase family signature 1. 466 482 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 RPIT_11270 3c80d68701d953068aa1d2a63a451d7f 317 Pfam PF00588 SpoU rRNA Methylase family 164 305 5.6E-35 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RPIT_11270 3c80d68701d953068aa1d2a63a451d7f 317 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 72 311 1.8E-59 T 13-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 RPIT_11270 3c80d68701d953068aa1d2a63a451d7f 317 Gene3D G3DSA:3.30.1330.30 62 143 2.4E-9 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like RPIT_11270 3c80d68701d953068aa1d2a63a451d7f 317 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 73 149 1.4E-18 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 RPIT_11270 3c80d68701d953068aa1d2a63a451d7f 317 Gene3D G3DSA:3.40.1280.10 144 312 2.7E-49 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIT_11270 3c80d68701d953068aa1d2a63a451d7f 317 SUPERFAMILY SSF75217 137 312 1.31E-41 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases RPIT_11270 3c80d68701d953068aa1d2a63a451d7f 317 SUPERFAMILY SSF55315 71 145 2.51E-15 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like RPIT_11270 3c80d68701d953068aa1d2a63a451d7f 317 SMART SM00967 73 149 7.7E-18 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 RPIT_02955 e050a4ba25fa2324d2e06604dbbb622e 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.1E-59 T 13-10-2018 IPR023798 Ribosomal protein S7 domain RPIT_02955 e050a4ba25fa2324d2e06604dbbb622e 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 9.6E-66 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RPIT_02955 e050a4ba25fa2324d2e06604dbbb622e 156 Gene3D G3DSA:1.10.455.10 2 156 1.4E-56 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily RPIT_02955 e050a4ba25fa2324d2e06604dbbb622e 156 PIRSF PIRSF002122 7 156 6.7E-57 T 13-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 RPIT_02955 e050a4ba25fa2324d2e06604dbbb622e 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 13-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_02955 e050a4ba25fa2324d2e06604dbbb622e 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.511 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RPIT_02955 e050a4ba25fa2324d2e06604dbbb622e 156 SUPERFAMILY SSF47973 1 149 2.88E-57 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily RPIT_10085 7647b119f6b0c11f35e9ef170ca3375d 610 Gene3D G3DSA:3.40.50.10490 445 595 1.3E-139 T 13-10-2018 RPIT_10085 7647b119f6b0c11f35e9ef170ca3375d 610 SUPERFAMILY SSF56235 2 230 1.54E-63 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal RPIT_10085 7647b119f6b0c11f35e9ef170ca3375d 610 SUPERFAMILY SSF53697 243 610 3.62E-110 T 13-10-2018 RPIT_10085 7647b119f6b0c11f35e9ef170ca3375d 610 Gene3D G3DSA:3.40.50.10490 246 609 1.3E-139 T 13-10-2018 RPIT_10085 7647b119f6b0c11f35e9ef170ca3375d 610 Gene3D G3DSA:3.60.20.10 2 238 9.0E-72 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal RPIT_10085 7647b119f6b0c11f35e9ef170ca3375d 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 38.754 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 RPIT_10085 7647b119f6b0c11f35e9ef170ca3375d 610 Pfam PF01380 SIS domain 461 592 8.7E-20 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 RPIT_10085 7647b119f6b0c11f35e9ef170ca3375d 610 Pfam PF01380 SIS domain 288 413 1.9E-34 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 RPIT_10085 7647b119f6b0c11f35e9ef170ca3375d 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 4.2E-239 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 RPIT_10085 7647b119f6b0c11f35e9ef170ca3375d 610 Pfam PF13522 Glutamine amidotransferase domain 65 191 5.7E-20 T 13-10-2018 RPIT_06560 49cd61446231d9feaf6cb29b09407931 631 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 17 627 2.5E-261 T 13-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 RPIT_06560 49cd61446231d9feaf6cb29b09407931 631 SMART SM00642 147 506 9.8E-6 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_06560 49cd61446231d9feaf6cb29b09407931 631 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 530 628 2.2E-17 T 13-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 RPIT_06560 49cd61446231d9feaf6cb29b09407931 631 Gene3D G3DSA:3.20.20.80 130 524 2.7E-166 T 13-10-2018 RPIT_06560 49cd61446231d9feaf6cb29b09407931 631 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 39 114 1.8E-16 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RPIT_06560 49cd61446231d9feaf6cb29b09407931 631 SUPERFAMILY SSF51011 525 628 9.17E-28 T 13-10-2018 RPIT_06560 49cd61446231d9feaf6cb29b09407931 631 Gene3D G3DSA:2.60.40.10 6 128 3.3E-35 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_06560 49cd61446231d9feaf6cb29b09407931 631 SUPERFAMILY SSF81296 47 107 5.04E-9 T 13-10-2018 IPR014756 Immunoglobulin E-set RPIT_06560 49cd61446231d9feaf6cb29b09407931 631 Gene3D G3DSA:2.60.40.1180 525 628 5.9E-34 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta RPIT_06560 49cd61446231d9feaf6cb29b09407931 631 PIRSF PIRSF000463 6 631 1.8E-269 T 13-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 RPIT_06560 49cd61446231d9feaf6cb29b09407931 631 SUPERFAMILY SSF51445 89 518 4.32E-104 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_06560 49cd61446231d9feaf6cb29b09407931 631 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 6 629 41.813 T 13-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 RPIT_06560 49cd61446231d9feaf6cb29b09407931 631 Pfam PF00128 Alpha amylase, catalytic domain 178 248 1.8E-6 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_08180 ec969f196c1f785f23ab376a60367e31 363 SMART SM00854 25 275 2.0E-64 T 13-10-2018 IPR019079 Capsule synthesis protein, CapA RPIT_08180 ec969f196c1f785f23ab376a60367e31 363 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 25 273 2.7E-59 T 13-10-2018 IPR019079 Capsule synthesis protein, CapA RPIT_08180 ec969f196c1f785f23ab376a60367e31 363 Gene3D G3DSA:3.60.21.10 92 276 9.6E-10 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like RPIT_08180 ec969f196c1f785f23ab376a60367e31 363 SUPERFAMILY SSF56300 54 313 7.05E-30 T 13-10-2018 RPIT_04205 825474bb41d29f80406a496ec555a28f 327 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 20 103 1.3E-23 T 13-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain RPIT_04205 825474bb41d29f80406a496ec555a28f 327 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 306 29.321 T 13-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 RPIT_04205 825474bb41d29f80406a496ec555a28f 327 Pfam PF02650 WhiA C-terminal HTH domain 221 301 1.4E-20 T 13-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal RPIT_04205 825474bb41d29f80406a496ec555a28f 327 Pfam PF14527 WhiA LAGLIDADG-like domain 128 218 3.7E-22 T 13-10-2018 IPR039518 WhiA, LAGLIDADG-like domain RPIT_04205 825474bb41d29f80406a496ec555a28f 327 Gene3D G3DSA:1.10.10.10 216 308 1.1E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_04205 825474bb41d29f80406a496ec555a28f 327 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 304 7.4E-96 T 13-10-2018 IPR033981 Sporulation regulator WhiA-like RPIT_04205 825474bb41d29f80406a496ec555a28f 327 Gene3D G3DSA:3.10.28.10 1 212 2.2E-18 T 13-10-2018 IPR027434 Homing endonuclease RPIT_11740 fe95ee26591f19e968183da09806c7ca 429 SUPERFAMILY SSF52540 55 284 7.74E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_11740 fe95ee26591f19e968183da09806c7ca 429 SMART SM00382 67 264 6.6E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_11740 fe95ee26591f19e968183da09806c7ca 429 Pfam PF00005 ABC transporter 60 206 3.0E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_11740 fe95ee26591f19e968183da09806c7ca 429 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 51 404 6.7E-114 T 13-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 RPIT_11740 fe95ee26591f19e968183da09806c7ca 429 ProSitePatterns PS00211 ABC transporters family signature. 179 193 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_11740 fe95ee26591f19e968183da09806c7ca 429 SUPERFAMILY SSF54631 288 409 6.57E-15 T 13-10-2018 RPIT_11740 fe95ee26591f19e968183da09806c7ca 429 Gene3D G3DSA:3.40.50.300 49 282 3.1E-67 T 13-10-2018 RPIT_11740 fe95ee26591f19e968183da09806c7ca 429 Gene3D G3DSA:3.10.580.10 283 404 8.5E-10 T 13-10-2018 RPIT_09905 c5cb0baaf14a69fc9767b37030a984f4 417 Gene3D G3DSA:3.30.565.10 292 417 6.5E-18 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_09905 c5cb0baaf14a69fc9767b37030a984f4 417 SUPERFAMILY SSF55874 304 417 2.36E-12 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_09905 c5cb0baaf14a69fc9767b37030a984f4 417 Pfam PF04024 PspC domain 16 71 6.4E-13 T 13-10-2018 IPR007168 Phage shock protein, PspC, N-terminal RPIT_02235 fa1007d7af3abacbe42c75b8c721bd3e 398 Gene3D G3DSA:1.10.260.40 4 69 2.6E-12 T 13-10-2018 RPIT_02235 fa1007d7af3abacbe42c75b8c721bd3e 398 SUPERFAMILY SSF47413 5 66 3.94E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_02235 fa1007d7af3abacbe42c75b8c721bd3e 398 Pfam PF06114 IrrE N-terminal-like domain 199 282 6.1E-12 T 13-10-2018 IPR010359 IrrE N-terminal-like domain RPIT_02235 fa1007d7af3abacbe42c75b8c721bd3e 398 SMART SM00530 10 66 7.9E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_02235 fa1007d7af3abacbe42c75b8c721bd3e 398 Pfam PF13560 Helix-turn-helix domain 7 62 8.5E-9 T 13-10-2018 RPIT_14880 949e1246a0325d1a739c606a30b6b87b 564 Gene3D G3DSA:3.30.413.10 159 337 7.5E-121 T 13-10-2018 RPIT_14880 949e1246a0325d1a739c606a30b6b87b 564 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 418 561 1.2E-9 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RPIT_14880 949e1246a0325d1a739c606a30b6b87b 564 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 466 482 - T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RPIT_14880 949e1246a0325d1a739c606a30b6b87b 564 SUPERFAMILY SSF55124 17 166 2.45E-36 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RPIT_14880 949e1246a0325d1a739c606a30b6b87b 564 PRINTS PR00397 Sirohaem Fe-binding site signature 466 484 1.6E-8 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RPIT_14880 949e1246a0325d1a739c606a30b6b87b 564 PRINTS PR00397 Sirohaem Fe-binding site signature 419 437 1.6E-8 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RPIT_14880 949e1246a0325d1a739c606a30b6b87b 564 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 167 320 2.5E-36 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RPIT_14880 949e1246a0325d1a739c606a30b6b87b 564 Gene3D G3DSA:3.30.413.10 416 564 5.3E-36 T 13-10-2018 RPIT_14880 949e1246a0325d1a739c606a30b6b87b 564 SUPERFAMILY SSF55124 299 430 1.46E-17 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RPIT_14880 949e1246a0325d1a739c606a30b6b87b 564 Gene3D G3DSA:3.90.480.20 29 403 7.5E-121 T 13-10-2018 RPIT_14880 949e1246a0325d1a739c606a30b6b87b 564 SUPERFAMILY SSF56014 167 326 3.53E-43 T 13-10-2018 RPIT_14880 949e1246a0325d1a739c606a30b6b87b 564 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 342 405 9.5E-13 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RPIT_14880 949e1246a0325d1a739c606a30b6b87b 564 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 96 157 1.7E-17 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RPIT_14880 949e1246a0325d1a739c606a30b6b87b 564 SUPERFAMILY SSF56014 415 564 1.44E-32 T 13-10-2018 RPIT_14585 ed762a06cb8738a7106fdcda5ede8d25 287 Gene3D G3DSA:1.10.287.70 56 156 4.4E-8 T 13-10-2018 RPIT_14585 ed762a06cb8738a7106fdcda5ede8d25 287 Pfam PF07885 Ion channel 71 151 4.9E-8 T 13-10-2018 IPR013099 Potassium channel domain RPIT_14585 ed762a06cb8738a7106fdcda5ede8d25 287 SUPERFAMILY SSF81324 37 153 5.76E-11 T 13-10-2018 RPIT_12405 4f601b7f94f5459de881f2e55450eff5 262 SUPERFAMILY SSF52540 14 254 6.21E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_12405 4f601b7f94f5459de881f2e55450eff5 262 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_12405 4f601b7f94f5459de881f2e55450eff5 262 SMART SM00382 41 240 1.9E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_12405 4f601b7f94f5459de881f2e55450eff5 262 Gene3D G3DSA:3.40.50.300 5 261 1.3E-81 T 13-10-2018 RPIT_12405 4f601b7f94f5459de881f2e55450eff5 262 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 261 9.0E-6 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIT_12405 4f601b7f94f5459de881f2e55450eff5 262 Pfam PF00005 ABC transporter 33 183 7.4E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_12630 128a47bbdcc8db6b9e78b0af96a6982a 500 Pfam PF17482 Phage tail sheath C-terminal domain 393 495 2.4E-5 T 13-10-2018 IPR020287 Tail sheath protein, C-terminal domain RPIT_12630 128a47bbdcc8db6b9e78b0af96a6982a 500 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 249 384 1.3E-10 T 13-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain RPIT_02840 bceb7a4924c4fcf3f1b8fa3d80bcd975 603 SUPERFAMILY SSF52540 352 598 4.15E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_02840 bceb7a4924c4fcf3f1b8fa3d80bcd975 603 Gene3D G3DSA:3.40.50.300 354 600 2.1E-82 T 13-10-2018 RPIT_02840 bceb7a4924c4fcf3f1b8fa3d80bcd975 603 SMART SM00382 388 574 8.8E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_02840 bceb7a4924c4fcf3f1b8fa3d80bcd975 603 SUPERFAMILY SSF90123 31 350 3.14E-76 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_02840 bceb7a4924c4fcf3f1b8fa3d80bcd975 603 Pfam PF00005 ABC transporter 381 528 2.0E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_02840 bceb7a4924c4fcf3f1b8fa3d80bcd975 603 Pfam PF00664 ABC transporter transmembrane region 46 317 1.6E-40 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 RPIT_02840 bceb7a4924c4fcf3f1b8fa3d80bcd975 603 Gene3D G3DSA:1.20.1560.10 12 350 2.6E-79 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_02840 bceb7a4924c4fcf3f1b8fa3d80bcd975 603 ProSitePatterns PS00211 ABC transporters family signature. 500 514 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_01035 94bd11fe92114e1c40c3a724332c1620 229 SUPERFAMILY SSF46894 158 225 1.94E-22 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIT_01035 94bd11fe92114e1c40c3a724332c1620 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 164 218 6.8E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_01035 94bd11fe92114e1c40c3a724332c1620 229 Gene3D G3DSA:3.40.50.12740 11 225 6.4E-71 T 13-10-2018 RPIT_01035 94bd11fe92114e1c40c3a724332c1620 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 179 7.2E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_01035 94bd11fe92114e1c40c3a724332c1620 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 195 7.2E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_01035 94bd11fe92114e1c40c3a724332c1620 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 207 7.2E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_01035 94bd11fe92114e1c40c3a724332c1620 229 SUPERFAMILY SSF52172 11 140 4.13E-36 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_01035 94bd11fe92114e1c40c3a724332c1620 229 ProSitePatterns PS00622 LuxR-type HTH domain signature. 179 206 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_01035 94bd11fe92114e1c40c3a724332c1620 229 SMART SM00421 162 219 8.2E-26 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_01035 94bd11fe92114e1c40c3a724332c1620 229 Pfam PF00072 Response regulator receiver domain 13 125 2.6E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_01035 94bd11fe92114e1c40c3a724332c1620 229 SMART SM00448 11 124 4.1E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_08285 73b739dfe1aa626ee1b2c2558491020c 164 Pfam PF07179 SseB protein N-terminal domain 28 142 5.5E-15 T 13-10-2018 IPR009839 SseB protein N-terminal domain RPIT_09635 5ee503c4ee112dfa8bfc8772c5478eeb 166 Gene3D G3DSA:3.40.50.7700 1 165 1.5E-72 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 RPIT_09635 5ee503c4ee112dfa8bfc8772c5478eeb 166 SUPERFAMILY SSF52255 4 160 3.4E-64 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 RPIT_09635 5ee503c4ee112dfa8bfc8772c5478eeb 166 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 6 157 32.162 T 13-10-2018 IPR033747 Class I PurE RPIT_09635 5ee503c4ee112dfa8bfc8772c5478eeb 166 SMART SM01001 4 153 1.1E-96 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RPIT_09635 5ee503c4ee112dfa8bfc8772c5478eeb 166 PIRSF PIRSF001338 1 163 5.7E-66 T 13-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 RPIT_09635 5ee503c4ee112dfa8bfc8772c5478eeb 166 Pfam PF00731 AIR carboxylase 6 150 8.0E-65 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RPIT_09635 5ee503c4ee112dfa8bfc8772c5478eeb 166 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 6 153 1.4E-63 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RPIT_00970 df4089e6db967bf43695e35d6f6a4ab9 135 SUPERFAMILY SSF46785 69 129 7.63E-10 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_00970 df4089e6db967bf43695e35d6f6a4ab9 135 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 5 55 1.0E-10 T 13-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain RPIT_00970 df4089e6db967bf43695e35d6f6a4ab9 135 Gene3D G3DSA:1.10.10.10 70 132 3.2E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_00970 df4089e6db967bf43695e35d6f6a4ab9 135 Pfam PF01047 MarR family 71 117 3.8E-6 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_00970 df4089e6db967bf43695e35d6f6a4ab9 135 Gene3D G3DSA:3.30.565.60 2 58 9.8E-10 T 13-10-2018 IPR038475 RecG, C-terminal domain superfamily RPIT_14040 4bee89894f2643eb3d7eee7db0b72f3c 425 SUPERFAMILY SSF52413 303 417 7.98E-23 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 RPIT_14040 4bee89894f2643eb3d7eee7db0b72f3c 425 Gene3D G3DSA:3.40.50.720 1 198 5.0E-60 T 13-10-2018 RPIT_14040 4bee89894f2643eb3d7eee7db0b72f3c 425 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 203 291 3.7E-23 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_14040 4bee89894f2643eb3d7eee7db0b72f3c 425 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 8 181 2.2E-31 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_14040 4bee89894f2643eb3d7eee7db0b72f3c 425 PIRSF PIRSF000124 7 421 2.1E-50 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RPIT_14040 4bee89894f2643eb3d7eee7db0b72f3c 425 PIRSF PIRSF500136 1 423 8.2E-143 T 13-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 RPIT_14040 4bee89894f2643eb3d7eee7db0b72f3c 425 SUPERFAMILY SSF48179 202 293 1.43E-24 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 RPIT_14040 4bee89894f2643eb3d7eee7db0b72f3c 425 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 318 416 3.3E-16 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_14040 4bee89894f2643eb3d7eee7db0b72f3c 425 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 8 398 4.0E-113 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RPIT_14040 4bee89894f2643eb3d7eee7db0b72f3c 425 SUPERFAMILY SSF51735 8 192 2.31E-47 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_14040 4bee89894f2643eb3d7eee7db0b72f3c 425 SMART SM00984 318 418 9.2E-24 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RPIT_14040 4bee89894f2643eb3d7eee7db0b72f3c 425 Gene3D G3DSA:3.40.50.720 201 422 1.3E-51 T 13-10-2018 RPIT_03990 32c3aa023ab01ac03e6864890147964b 308 PIRSF PIRSF004486 1 305 1.7E-95 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 RPIT_03990 32c3aa023ab01ac03e6864890147964b 308 SUPERFAMILY SSF81799 108 209 4.97E-34 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 RPIT_03990 32c3aa023ab01ac03e6864890147964b 308 Pfam PF01795 MraW methylase family 3 303 4.2E-107 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 RPIT_03990 32c3aa023ab01ac03e6864890147964b 308 Gene3D G3DSA:3.40.50.150 7 300 2.0E-95 T 13-10-2018 RPIT_03990 32c3aa023ab01ac03e6864890147964b 308 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 304 34.881 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 RPIT_03990 32c3aa023ab01ac03e6864890147964b 308 SUPERFAMILY SSF53335 8 304 9.22E-39 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_03990 32c3aa023ab01ac03e6864890147964b 308 Gene3D G3DSA:1.10.150.170 106 211 2.0E-95 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 RPIT_03990 32c3aa023ab01ac03e6864890147964b 308 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 15 303 7.0E-92 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 RPIT_08205 dba0857fdb29c4c5a260ae387cfd26c2 390 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 14 385 1.9E-131 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 RPIT_08205 dba0857fdb29c4c5a260ae387cfd26c2 390 PIRSF PIRSF000521 166 389 2.8E-23 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIT_08205 dba0857fdb29c4c5a260ae387cfd26c2 390 PIRSF PIRSF000521 22 125 4.5E-10 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIT_08205 dba0857fdb29c4c5a260ae387cfd26c2 390 PIRSF PIRSF000521 118 152 0.006 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIT_08205 dba0857fdb29c4c5a260ae387cfd26c2 390 Gene3D G3DSA:3.90.1150.10 24 378 1.4E-134 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_08205 dba0857fdb29c4c5a260ae387cfd26c2 390 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 215 252 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIT_08205 dba0857fdb29c4c5a260ae387cfd26c2 390 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 389 64.935 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 RPIT_08205 dba0857fdb29c4c5a260ae387cfd26c2 390 Gene3D G3DSA:3.40.640.10 57 296 1.4E-134 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_08205 dba0857fdb29c4c5a260ae387cfd26c2 390 Pfam PF00202 Aminotransferase class-III 23 382 3.7E-101 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIT_08205 dba0857fdb29c4c5a260ae387cfd26c2 390 SUPERFAMILY SSF53383 12 388 1.5E-118 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_04475 6dc7c9394bb99b005679014c137d0277 1008 SUPERFAMILY SSF74853 44 123 1.44E-5 T 13-10-2018 IPR036415 Lamin tail domain superfamily RPIT_04475 6dc7c9394bb99b005679014c137d0277 1008 Gene3D G3DSA:3.60.10.10 461 757 8.3E-29 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily RPIT_04475 6dc7c9394bb99b005679014c137d0277 1008 Pfam PF05345 Putative Ig domain 797 836 2.1E-8 T 13-10-2018 IPR008009 Putative Ig RPIT_04475 6dc7c9394bb99b005679014c137d0277 1008 SUPERFAMILY SSF49313 765 850 5.18E-13 T 13-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 RPIT_04475 6dc7c9394bb99b005679014c137d0277 1008 SUPERFAMILY SSF56219 461 757 2.02E-28 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily RPIT_04475 6dc7c9394bb99b005679014c137d0277 1008 Gene3D G3DSA:2.60.40.10 763 850 1.2E-21 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_04475 6dc7c9394bb99b005679014c137d0277 1008 SMART SM00736 766 855 1.5E-7 T 13-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 RPIT_04475 6dc7c9394bb99b005679014c137d0277 1008 Pfam PF00932 Lamin Tail Domain 29 137 1.9E-15 T 13-10-2018 IPR001322 Lamin tail domain RPIT_12685 3548fd267cbf8c6df7094ea5a9cc2f7d 232 SUPERFAMILY SSF49879 126 227 1.66E-24 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 RPIT_12685 3548fd267cbf8c6df7094ea5a9cc2f7d 232 Gene3D G3DSA:2.60.200.20 139 230 3.5E-22 T 13-10-2018 RPIT_12685 3548fd267cbf8c6df7094ea5a9cc2f7d 232 Pfam PF00498 FHA domain 154 220 2.0E-16 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RPIT_12685 3548fd267cbf8c6df7094ea5a9cc2f7d 232 Pfam PF12401 Protein of unknown function (DUF2662) 4 117 6.2E-34 T 13-10-2018 IPR022128 Domain of unknown function DUF3662 RPIT_12685 3548fd267cbf8c6df7094ea5a9cc2f7d 232 Gene3D G3DSA:3.30.2320.60 1 127 3.4E-35 T 13-10-2018 RPIT_12685 3548fd267cbf8c6df7094ea5a9cc2f7d 232 SMART SM00240 152 206 5.3E-14 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RPIT_02590 b13dfd223c3b112e9a047303ace8d265 564 SUPERFAMILY SSF53098 380 558 7.59E-8 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily RPIT_02590 b13dfd223c3b112e9a047303ace8d265 564 Pfam PF13482 RNase_H superfamily 380 558 2.0E-17 T 13-10-2018 IPR038720 YprB, ribonuclease H-like domain RPIT_02590 b13dfd223c3b112e9a047303ace8d265 564 TIGRFAM TIGR03491 TIGR03491: putative RecB family nuclease, TM0106 family 258 558 5.1E-42 T 13-10-2018 IPR019993 RecB family nuclease, TM0106, putative RPIT_04070 f2b89813ec11ee63790314705cc90630 178 TIGRFAM TIGR00077 lspA: signal peptidase II 23 166 2.4E-23 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 RPIT_04070 f2b89813ec11ee63790314705cc90630 178 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 62 70 3.8E-12 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 RPIT_04070 f2b89813ec11ee63790314705cc90630 178 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 105 120 3.8E-12 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 RPIT_04070 f2b89813ec11ee63790314705cc90630 178 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 143 159 3.8E-12 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 RPIT_04070 f2b89813ec11ee63790314705cc90630 178 Pfam PF01252 Signal peptidase (SPase) II 26 163 1.9E-27 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 RPIT_04070 f2b89813ec11ee63790314705cc90630 178 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 15 168 13.364 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 RPIT_08760 28ee9dae60946110d06c7dc3363f0370 651 SMART SM00729 270 493 2.4E-27 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 RPIT_08760 28ee9dae60946110d06c7dc3363f0370 651 SUPERFAMILY SSF102114 233 641 1.96E-49 T 13-10-2018 RPIT_08760 28ee9dae60946110d06c7dc3363f0370 651 Gene3D G3DSA:3.80.30.20 269 451 1.6E-17 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe RPIT_08760 28ee9dae60946110d06c7dc3363f0370 651 TIGRFAM TIGR03960 rSAM_fuse_unch: radical SAM family uncharacterized protein 19 624 1.6E-213 T 13-10-2018 IPR023862 Conserved hypothetical protein CHP03960, radical SAM RPIT_08760 28ee9dae60946110d06c7dc3363f0370 651 Pfam PF04055 Radical SAM superfamily 274 439 9.2E-17 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIT_02545 eaf6e1702ab0e6253cdc789c6bbd1122 300 SUPERFAMILY SSF161111 9 208 1.07E-56 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily RPIT_02545 eaf6e1702ab0e6253cdc789c6bbd1122 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 1.9E-17 T 13-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain RPIT_02545 eaf6e1702ab0e6253cdc789c6bbd1122 300 Gene3D G3DSA:3.30.70.1350 206 293 9.5E-22 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 RPIT_02545 eaf6e1702ab0e6253cdc789c6bbd1122 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 287 6.5E-70 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIT_02545 eaf6e1702ab0e6253cdc789c6bbd1122 300 SUPERFAMILY SSF160240 209 288 6.28E-16 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 RPIT_02545 eaf6e1702ab0e6253cdc789c6bbd1122 300 Gene3D G3DSA:1.20.1510.10 8 205 5.0E-57 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily RPIT_02545 eaf6e1702ab0e6253cdc789c6bbd1122 300 Pfam PF01545 Cation efflux family 13 206 3.6E-44 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIT_10760 e5bd80a5787a21651bccafd85d7e1fce 406 SUPERFAMILY SSF89392 119 275 1.49E-11 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX RPIT_10760 e5bd80a5787a21651bccafd85d7e1fce 406 Gene3D G3DSA:2.50.20.10 82 274 4.8E-16 T 13-10-2018 RPIT_10020 b38500939730a86176da85f0119859b2 325 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 33 65 4.6E-9 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RPIT_10020 b38500939730a86176da85f0119859b2 325 SUPERFAMILY SSF161098 118 304 3.27E-23 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_10020 b38500939730a86176da85f0119859b2 325 Gene3D G3DSA:1.10.3720.10 111 318 7.7E-18 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_10020 b38500939730a86176da85f0119859b2 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 140 322 1.6E-25 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_04830 3dc0a4eb424161cb559f423b4ac6922f 196 Pfam PF12836 Helix-hairpin-helix motif 134 194 6.4E-24 T 13-10-2018 RPIT_04830 3dc0a4eb424161cb559f423b4ac6922f 196 Gene3D G3DSA:3.10.560.10 52 142 1.0E-6 T 13-10-2018 RPIT_04830 3dc0a4eb424161cb559f423b4ac6922f 196 Gene3D G3DSA:1.10.150.310 143 196 3.7E-16 T 13-10-2018 RPIT_04830 3dc0a4eb424161cb559f423b4ac6922f 196 SMART SM00278 173 192 17.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RPIT_04830 3dc0a4eb424161cb559f423b4ac6922f 196 SMART SM00278 143 162 0.033 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RPIT_04830 3dc0a4eb424161cb559f423b4ac6922f 196 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 133 189 2.0E-17 T 13-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain RPIT_04830 3dc0a4eb424161cb559f423b4ac6922f 196 Pfam PF10531 SLBB domain 57 109 2.6E-11 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_04830 3dc0a4eb424161cb559f423b4ac6922f 196 SUPERFAMILY SSF47781 131 193 7.89E-27 T 13-10-2018 IPR010994 RuvA domain 2-like RPIT_00220 7b2f5b885a71c1bb2ab1dcabc8505e43 414 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 22 65 3.0E-8 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RPIT_00220 7b2f5b885a71c1bb2ab1dcabc8505e43 414 Pfam PF01610 Transposase 144 406 1.6E-57 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RPIT_00220 7b2f5b885a71c1bb2ab1dcabc8505e43 414 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 77 125 6.5E-9 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain RPIT_06835 4406cb8f55b00caaff68f04f3853db87 257 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_06835 4406cb8f55b00caaff68f04f3853db87 257 Gene3D G3DSA:3.40.50.300 1 257 2.0E-79 T 13-10-2018 RPIT_06835 4406cb8f55b00caaff68f04f3853db87 257 SUPERFAMILY SSF52540 3 249 4.57E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06835 4406cb8f55b00caaff68f04f3853db87 257 SMART SM00382 32 228 5.6E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_06835 4406cb8f55b00caaff68f04f3853db87 257 Pfam PF00005 ABC transporter 23 178 1.0E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_06590 239d0f3c4855f6f41c07a9a870406025 301 SUPERFAMILY SSF48452 160 293 1.26E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 RPIT_06590 239d0f3c4855f6f41c07a9a870406025 301 SUPERFAMILY SSF52833 27 136 6.06E-17 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_06590 239d0f3c4855f6f41c07a9a870406025 301 Pfam PF14561 Tetratricopeptide repeat 218 301 4.6E-21 T 13-10-2018 RPIT_06590 239d0f3c4855f6f41c07a9a870406025 301 Gene3D G3DSA:1.25.40.10 218 301 1.5E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 RPIT_06590 239d0f3c4855f6f41c07a9a870406025 301 Gene3D G3DSA:3.40.30.10 26 136 1.9E-14 T 13-10-2018 RPIT_06590 239d0f3c4855f6f41c07a9a870406025 301 Pfam PF00085 Thioredoxin 32 133 2.5E-9 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 RPIT_06415 3b43ca195849fa72877d63a6012276ee 488 SUPERFAMILY SSF46548 6 158 1.73E-34 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIT_06415 3b43ca195849fa72877d63a6012276ee 488 Gene3D G3DSA:3.50.50.60 408 461 3.0E-8 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_06415 3b43ca195849fa72877d63a6012276ee 488 Gene3D G3DSA:3.40.50.720 148 253 7.6E-16 T 13-10-2018 RPIT_06415 3b43ca195849fa72877d63a6012276ee 488 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 374 458 6.6E-12 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIT_06415 3b43ca195849fa72877d63a6012276ee 488 SUPERFAMILY SSF51971 375 469 8.59E-11 T 13-10-2018 RPIT_06415 3b43ca195849fa72877d63a6012276ee 488 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 1.0E-23 T 13-10-2018 RPIT_06415 3b43ca195849fa72877d63a6012276ee 488 PRINTS PR00419 Adrenodoxin reductase family signature 149 171 1.0E-23 T 13-10-2018 RPIT_06415 3b43ca195849fa72877d63a6012276ee 488 PRINTS PR00419 Adrenodoxin reductase family signature 214 224 1.0E-23 T 13-10-2018 RPIT_06415 3b43ca195849fa72877d63a6012276ee 488 PRINTS PR00419 Adrenodoxin reductase family signature 172 185 1.0E-23 T 13-10-2018 RPIT_06415 3b43ca195849fa72877d63a6012276ee 488 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 149 315 1.4E-16 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIT_06415 3b43ca195849fa72877d63a6012276ee 488 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 44 133 2.8E-20 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 RPIT_06415 3b43ca195849fa72877d63a6012276ee 488 Gene3D G3DSA:3.50.50.60 254 402 3.2E-34 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_06415 3b43ca195849fa72877d63a6012276ee 488 Gene3D G3DSA:1.10.1060.10 19 147 2.4E-19 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIT_06415 3b43ca195849fa72877d63a6012276ee 488 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 4 476 6.4E-203 T 13-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 RPIT_06415 3b43ca195849fa72877d63a6012276ee 488 SUPERFAMILY SSF51971 147 403 1.24E-63 T 13-10-2018 RPIT_14755 3391ec16e28fe851e19c9e31e08b2ada 345 Pfam PF03773 Predicted permease 52 339 5.9E-68 T 13-10-2018 IPR005524 Predicted permease DUF318 RPIT_12915 fbf26b4b0b4a97a044b03d9b4154a0de 120 SUPERFAMILY SSF46785 8 107 9.29E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_12915 fbf26b4b0b4a97a044b03d9b4154a0de 120 Pfam PF03965 Penicillinase repressor 8 112 2.1E-22 T 13-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 RPIT_12915 fbf26b4b0b4a97a044b03d9b4154a0de 120 Gene3D G3DSA:1.10.10.10 2 71 5.9E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_13815 97ecff7c8a01fc9ec80e7598598a49c9 376 Pfam PF13439 Glycosyltransferase Family 4 13 172 2.0E-10 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RPIT_13815 97ecff7c8a01fc9ec80e7598598a49c9 376 SUPERFAMILY SSF53756 6 356 1.75E-70 T 13-10-2018 RPIT_13815 97ecff7c8a01fc9ec80e7598598a49c9 376 Gene3D G3DSA:3.40.50.2000 13 356 1.6E-58 T 13-10-2018 RPIT_13815 97ecff7c8a01fc9ec80e7598598a49c9 376 Gene3D G3DSA:3.40.50.2000 169 347 1.6E-58 T 13-10-2018 RPIT_13815 97ecff7c8a01fc9ec80e7598598a49c9 376 Pfam PF00534 Glycosyl transferases group 1 186 341 3.9E-30 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 RPIT_12850 7e3713d11439839ba3d3acdfdc803dad 348 Pfam PF13377 Periplasmic binding protein-like domain 183 334 2.2E-22 T 13-10-2018 RPIT_12850 7e3713d11439839ba3d3acdfdc803dad 348 Gene3D G3DSA:1.10.260.40 7 69 5.8E-16 T 13-10-2018 RPIT_12850 7e3713d11439839ba3d3acdfdc803dad 348 Gene3D G3DSA:3.40.50.2300 173 332 4.0E-55 T 13-10-2018 RPIT_12850 7e3713d11439839ba3d3acdfdc803dad 348 SMART SM00354 13 84 2.9E-19 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_12850 7e3713d11439839ba3d3acdfdc803dad 348 ProSitePatterns PS00356 LacI-type HTH domain signature. 16 34 - T 13-10-2018 RPIT_12850 7e3713d11439839ba3d3acdfdc803dad 348 SUPERFAMILY SSF53822 73 337 1.85E-50 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_12850 7e3713d11439839ba3d3acdfdc803dad 348 Pfam PF00356 Bacterial regulatory proteins, lacI family 15 60 1.0E-12 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_12850 7e3713d11439839ba3d3acdfdc803dad 348 SUPERFAMILY SSF47413 13 71 7.7E-13 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_12850 7e3713d11439839ba3d3acdfdc803dad 348 Gene3D G3DSA:3.40.50.2300 75 327 4.0E-55 T 13-10-2018 RPIT_04760 c2adeb8151eafe7c1371355ddd8c7787 409 Pfam PF01593 Flavin containing amine oxidoreductase 12 387 1.7E-23 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 RPIT_04760 c2adeb8151eafe7c1371355ddd8c7787 409 SUPERFAMILY SSF51905 1 396 1.36E-39 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_04760 c2adeb8151eafe7c1371355ddd8c7787 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 218 233 5.7E-5 T 13-10-2018 RPIT_04760 c2adeb8151eafe7c1371355ddd8c7787 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 5.7E-5 T 13-10-2018 RPIT_04760 c2adeb8151eafe7c1371355ddd8c7787 409 Gene3D G3DSA:3.50.50.60 1 259 1.6E-34 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_08275 d89420bc3800a189eef8de24f331945a 68 Pfam PF01632 Ribosomal protein L35 2 62 4.8E-23 T 13-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08275 d89420bc3800a189eef8de24f331945a 68 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 16.657 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RPIT_08275 d89420bc3800a189eef8de24f331945a 68 SUPERFAMILY SSF143034 2 63 3.4E-20 T 13-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08275 d89420bc3800a189eef8de24f331945a 68 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 5.0E-23 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RPIT_08275 d89420bc3800a189eef8de24f331945a 68 Gene3D G3DSA:2.40.50.530 1 63 3.6E-23 T 13-10-2018 RPIT_08275 d89420bc3800a189eef8de24f331945a 68 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 13-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_08275 d89420bc3800a189eef8de24f331945a 68 PRINTS PR00064 Ribosomal protein L35 signature 3 20 3.1E-14 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RPIT_08275 d89420bc3800a189eef8de24f331945a 68 PRINTS PR00064 Ribosomal protein L35 signature 36 54 3.1E-14 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RPIT_08275 d89420bc3800a189eef8de24f331945a 68 PRINTS PR00064 Ribosomal protein L35 signature 21 35 3.1E-14 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RPIT_02280 ca490326eef499c427a208bf7c751367 118 SUPERFAMILY SSF55961 8 94 1.77E-7 T 13-10-2018 RPIT_02280 ca490326eef499c427a208bf7c751367 118 Gene3D G3DSA:3.30.530.20 31 112 3.2E-5 T 13-10-2018 IPR023393 START-like domain superfamily RPIT_01115 7d6a78be2e612b1d437e87159f4eb749 414 Pfam PF00890 FAD binding domain 3 395 6.4E-31 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RPIT_01115 7d6a78be2e612b1d437e87159f4eb749 414 SUPERFAMILY SSF51905 3 411 3.17E-25 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_01115 7d6a78be2e612b1d437e87159f4eb749 414 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 409 3.9E-58 T 13-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIT_01115 7d6a78be2e612b1d437e87159f4eb749 414 Gene3D G3DSA:3.50.50.60 1 123 1.2E-9 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_01115 7d6a78be2e612b1d437e87159f4eb749 414 PIRSF PIRSF000141 1 414 2.5E-75 T 13-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIT_14600 da81481e9e9010a583019d7e5b20aefd 267 PIRSF PIRSF000706 2 265 7.5E-81 T 13-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 RPIT_14600 da81481e9e9010a583019d7e5b20aefd 267 Pfam PF01636 Phosphotransferase enzyme family 17 258 1.2E-29 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase RPIT_14600 da81481e9e9010a583019d7e5b20aefd 267 Gene3D G3DSA:3.30.200.20 8 83 2.0E-16 T 13-10-2018 RPIT_14600 da81481e9e9010a583019d7e5b20aefd 267 Gene3D G3DSA:3.90.1200.10 84 264 4.5E-53 T 13-10-2018 RPIT_14600 da81481e9e9010a583019d7e5b20aefd 267 SUPERFAMILY SSF56112 6 263 1.9E-42 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily RPIT_08390 1df96cb710d79c479142a8c538149d0b 460 Gene3D G3DSA:3.30.950.30 6 130 1.4E-12 T 13-10-2018 IPR038461 Schlafen, AAA domain superfamily RPIT_08390 1df96cb710d79c479142a8c538149d0b 460 Pfam PF04326 Putative DNA-binding domain 19 128 3.5E-11 T 13-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 RPIT_08390 1df96cb710d79c479142a8c538149d0b 460 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 294 379 1.3E-15 T 13-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain RPIT_08390 1df96cb710d79c479142a8c538149d0b 460 Gene3D G3DSA:3.30.565.60 231 383 1.7E-33 T 13-10-2018 IPR038475 RecG, C-terminal domain superfamily RPIT_13575 88e9680f1c6458ee45f6398bdca7fbcd 206 Pfam PF02527 rRNA small subunit methyltransferase G 21 182 3.7E-45 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RPIT_13575 88e9680f1c6458ee45f6398bdca7fbcd 206 SUPERFAMILY SSF53335 17 184 8.98E-33 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_13575 88e9680f1c6458ee45f6398bdca7fbcd 206 PIRSF PIRSF003078 3 204 2.3E-42 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RPIT_13575 88e9680f1c6458ee45f6398bdca7fbcd 206 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 183 9.9E-39 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RPIT_13575 88e9680f1c6458ee45f6398bdca7fbcd 206 Gene3D G3DSA:3.40.50.150 11 206 2.3E-53 T 13-10-2018 RPIT_13575 88e9680f1c6458ee45f6398bdca7fbcd 206 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 11 204 24.053 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RPIT_11955 520578084019279be94d36d969e12e5b 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 298 1.5E-10 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_11955 520578084019279be94d36d969e12e5b 305 SUPERFAMILY SSF161098 11 304 2.9E-45 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_11955 520578084019279be94d36d969e12e5b 305 Gene3D G3DSA:1.10.3720.10 53 302 2.0E-54 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_03135 d528cc0931d996b0c927d00de4970918 482 Gene3D G3DSA:3.40.50.300 223 380 1.3E-38 T 13-10-2018 RPIT_03135 d528cc0931d996b0c927d00de4970918 482 SUPERFAMILY SSF52540 77 357 4.77E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_03135 d528cc0931d996b0c927d00de4970918 482 SMART SM00490 259 340 1.1E-25 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_03135 d528cc0931d996b0c927d00de4970918 482 SMART SM00487 23 225 2.4E-46 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIT_03135 d528cc0931d996b0c927d00de4970918 482 Pfam PF00270 DEAD/DEAH box helicase 28 198 6.2E-42 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIT_03135 d528cc0931d996b0c927d00de4970918 482 Pfam PF00271 Helicase conserved C-terminal domain 235 340 5.6E-23 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_03135 d528cc0931d996b0c927d00de4970918 482 Gene3D G3DSA:3.40.50.300 2 211 1.1E-65 T 13-10-2018 RPIT_13365 3a0e026202fea0d1005e6168c2a373d7 119 SUPERFAMILY SSF46785 10 91 1.57E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_13365 3a0e026202fea0d1005e6168c2a373d7 119 SMART SM00418 13 91 1.4E-27 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_13365 3a0e026202fea0d1005e6168c2a373d7 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 4.5E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_13365 3a0e026202fea0d1005e6168c2a373d7 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 4.5E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_13365 3a0e026202fea0d1005e6168c2a373d7 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 4.5E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_13365 3a0e026202fea0d1005e6168c2a373d7 119 Gene3D G3DSA:1.10.10.10 1 89 4.5E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_13365 3a0e026202fea0d1005e6168c2a373d7 119 Pfam PF01022 Bacterial regulatory protein, arsR family 20 64 3.6E-14 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_00390 bab85f4779fc1105777f8988aa2aa9fd 262 Pfam PF06724 Domain of Unknown Function (DUF1206) 23 88 5.6E-13 T 13-10-2018 IPR009597 Domain of unknown function DUF1206 RPIT_00390 bab85f4779fc1105777f8988aa2aa9fd 262 Pfam PF06724 Domain of Unknown Function (DUF1206) 190 258 6.4E-17 T 13-10-2018 IPR009597 Domain of unknown function DUF1206 RPIT_00390 bab85f4779fc1105777f8988aa2aa9fd 262 Pfam PF06724 Domain of Unknown Function (DUF1206) 104 167 3.5E-10 T 13-10-2018 IPR009597 Domain of unknown function DUF1206 RPIT_13715 5514fe5e727d6c561752023fdd3d24b2 123 SUPERFAMILY SSF46767 20 87 4.19E-12 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 RPIT_13715 5514fe5e727d6c561752023fdd3d24b2 123 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 21 87 1.6E-13 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RPIT_13715 5514fe5e727d6c561752023fdd3d24b2 123 Gene3D G3DSA:1.10.10.10 18 115 4.4E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_12740 ba3293ba507adf9077eabfca19636b74 434 Pfam PF13416 Bacterial extracellular solute-binding protein 58 360 3.8E-31 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein RPIT_12740 ba3293ba507adf9077eabfca19636b74 434 SUPERFAMILY SSF53850 41 426 2.33E-41 T 13-10-2018 RPIT_12740 ba3293ba507adf9077eabfca19636b74 434 Gene3D G3DSA:3.40.190.10 60 359 3.1E-54 T 13-10-2018 RPIT_12740 ba3293ba507adf9077eabfca19636b74 434 Gene3D G3DSA:3.40.190.10 152 408 3.1E-54 T 13-10-2018 RPIT_11355 8da9b5fd47e467c12eae3d445b2c3c67 119 Gene3D G3DSA:2.40.50.100 47 119 2.1E-25 T 13-10-2018 RPIT_11355 8da9b5fd47e467c12eae3d445b2c3c67 119 Pfam PF00364 Biotin-requiring enzyme 56 118 1.9E-19 T 13-10-2018 IPR000089 Biotin/lipoyl attachment RPIT_11355 8da9b5fd47e467c12eae3d445b2c3c67 119 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 76 93 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RPIT_11355 8da9b5fd47e467c12eae3d445b2c3c67 119 SUPERFAMILY SSF51230 50 118 9.55E-23 T 13-10-2018 IPR011053 Single hybrid motif RPIT_06960 4ddaea939ca1a59a1911c8bc6cd69a01 310 SUPERFAMILY SSF88659 156 228 7.59E-18 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like RPIT_06960 4ddaea939ca1a59a1911c8bc6cd69a01 310 Pfam PF04545 Sigma-70, region 4 252 303 4.0E-13 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 RPIT_06960 4ddaea939ca1a59a1911c8bc6cd69a01 310 Pfam PF04542 Sigma-70 region 2 83 152 2.1E-19 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_06960 4ddaea939ca1a59a1911c8bc6cd69a01 310 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 80 304 9.7E-32 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 RPIT_06960 4ddaea939ca1a59a1911c8bc6cd69a01 310 Gene3D G3DSA:1.20.120.1810 16 152 1.3E-44 T 13-10-2018 RPIT_06960 4ddaea939ca1a59a1911c8bc6cd69a01 310 Gene3D G3DSA:1.10.10.10 156 231 1.5E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_06960 4ddaea939ca1a59a1911c8bc6cd69a01 310 SUPERFAMILY SSF88659 214 304 6.02E-23 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like RPIT_06960 4ddaea939ca1a59a1911c8bc6cd69a01 310 Pfam PF04539 Sigma-70 region 3 162 238 5.5E-21 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 RPIT_06960 4ddaea939ca1a59a1911c8bc6cd69a01 310 SUPERFAMILY SSF88946 17 153 1.44E-44 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_06960 4ddaea939ca1a59a1911c8bc6cd69a01 310 Pfam PF00140 Sigma-70 factor, region 1.2 17 50 1.2E-11 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIT_06960 4ddaea939ca1a59a1911c8bc6cd69a01 310 Gene3D G3DSA:1.10.10.10 233 308 4.1E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_06960 4ddaea939ca1a59a1911c8bc6cd69a01 310 PRINTS PR00046 Major sigma-70 factor signature 291 302 1.5E-22 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 RPIT_06960 4ddaea939ca1a59a1911c8bc6cd69a01 310 PRINTS PR00046 Major sigma-70 factor signature 255 267 1.5E-22 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 RPIT_06960 4ddaea939ca1a59a1911c8bc6cd69a01 310 PRINTS PR00046 Major sigma-70 factor signature 276 291 1.5E-22 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 RPIT_06960 4ddaea939ca1a59a1911c8bc6cd69a01 310 PRINTS PR00046 Major sigma-70 factor signature 131 139 1.5E-22 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 RPIT_06960 4ddaea939ca1a59a1911c8bc6cd69a01 310 PRINTS PR00046 Major sigma-70 factor signature 107 120 1.5E-22 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 RPIT_09035 8f428aa43929dd4d5ad2a8bb0df2980c 425 Pfam PF13367 Protease prsW family 74 267 1.6E-31 T 13-10-2018 IPR026898 Protease PrsW GO:0008233 RPIT_04955 8b973b8016c1c0035e0e8aacc38c79f8 258 SUPERFAMILY SSF56655 5 244 2.09E-46 T 13-10-2018 RPIT_04955 8b973b8016c1c0035e0e8aacc38c79f8 258 Pfam PF00459 Inositol monophosphatase family 8 246 2.2E-32 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RPIT_04955 8b973b8016c1c0035e0e8aacc38c79f8 258 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 87 100 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site RPIT_04955 8b973b8016c1c0035e0e8aacc38c79f8 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 3.1E-16 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RPIT_04955 8b973b8016c1c0035e0e8aacc38c79f8 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 3.1E-16 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RPIT_04955 8b973b8016c1c0035e0e8aacc38c79f8 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 203 227 3.1E-16 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RPIT_04955 8b973b8016c1c0035e0e8aacc38c79f8 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 87 103 3.1E-16 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RPIT_04955 8b973b8016c1c0035e0e8aacc38c79f8 258 Gene3D G3DSA:3.30.540.10 3 146 7.2E-29 T 13-10-2018 RPIT_04955 8b973b8016c1c0035e0e8aacc38c79f8 258 Gene3D G3DSA:3.40.190.80 171 253 6.8E-12 T 13-10-2018 RPIT_05025 d24a34da4ff1f198a62ddbe8d97f9a8f 308 SUPERFAMILY SSF161098 78 295 1.11E-44 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_05025 d24a34da4ff1f198a62ddbe8d97f9a8f 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 299 4.1E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_05025 d24a34da4ff1f198a62ddbe8d97f9a8f 308 Gene3D G3DSA:1.10.3720.10 61 307 2.8E-48 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_10170 403d90a90d8b1e3e372c691edd2581b5 393 Gene3D G3DSA:3.40.50.2000 6 385 3.8E-76 T 13-10-2018 RPIT_10170 403d90a90d8b1e3e372c691edd2581b5 393 Gene3D G3DSA:3.40.50.2000 172 369 3.8E-76 T 13-10-2018 RPIT_10170 403d90a90d8b1e3e372c691edd2581b5 393 Pfam PF00534 Glycosyl transferases group 1 192 328 6.7E-26 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 RPIT_10170 403d90a90d8b1e3e372c691edd2581b5 393 SUPERFAMILY SSF53756 1 390 1.77E-79 T 13-10-2018 RPIT_10170 403d90a90d8b1e3e372c691edd2581b5 393 TIGRFAM TIGR02149 glgA_Coryne: glycogen synthase, Corynebacterium family 1 387 4.6E-168 T 13-10-2018 IPR011875 Alpha-maltose-1-phosphate synthase GO:0009250|GO:0016740 KEGG: 00500+2.4.1.342|MetaCyc: PWY-7900 RPIT_10170 403d90a90d8b1e3e372c691edd2581b5 393 Pfam PF13439 Glycosyltransferase Family 4 15 176 9.8E-31 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RPIT_10550 53d7957a0fea4196b8d0ffbe9e664f4a 669 PIRSF PIRSF006402 1 669 1.3E-182 T 13-10-2018 IPR024705 Spermatogenesis-associated protein 20 RPIT_10550 53d7957a0fea4196b8d0ffbe9e664f4a 669 Pfam PF03190 Protein of unknown function, DUF255 3 164 9.3E-70 T 13-10-2018 IPR004879 Domain of unknown function DUF255 RPIT_10550 53d7957a0fea4196b8d0ffbe9e664f4a 669 SUPERFAMILY SSF52833 2 146 1.34E-31 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_10550 53d7957a0fea4196b8d0ffbe9e664f4a 669 SUPERFAMILY SSF48208 185 513 2.93E-56 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 RPIT_10550 53d7957a0fea4196b8d0ffbe9e664f4a 669 Gene3D G3DSA:3.40.30.10 1 170 4.7E-66 T 13-10-2018 RPIT_13825 f739107fda75220f0558f5c46fecc710 505 Pfam PF01943 Polysaccharide biosynthesis protein 11 286 1.7E-7 T 13-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 RPIT_12800 2101205ea00d930b5e079aacfd423860 358 SUPERFAMILY SSF51569 1 354 2.81E-73 T 13-10-2018 RPIT_12800 2101205ea00d930b5e079aacfd423860 358 Gene3D G3DSA:3.20.20.70 2 352 1.8E-142 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_12800 2101205ea00d930b5e079aacfd423860 358 PIRSF PIRSF036915 1 358 7.2E-152 T 13-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RPIT_12800 2101205ea00d930b5e079aacfd423860 358 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 15 351 4.0E-75 T 13-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 RPIT_12800 2101205ea00d930b5e079aacfd423860 358 ProSitePatterns PS01054 Transaldolase signature 1. 41 49 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 RPIT_12800 2101205ea00d930b5e079aacfd423860 358 TIGRFAM TIGR00876 tal_mycobact: transaldolase 11 348 4.1E-115 T 13-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RPIT_12800 2101205ea00d930b5e079aacfd423860 358 Hamap MF_00493 Transaldolase [tal]. 1 358 139.996 T 13-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RPIT_02435 e49f6e26ff4daeac16a57910c3a80129 267 SMART SM00028 171 204 12.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 RPIT_02435 e49f6e26ff4daeac16a57910c3a80129 267 SMART SM00028 205 240 5.1 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 RPIT_02435 e49f6e26ff4daeac16a57910c3a80129 267 Gene3D G3DSA:1.25.40.10 154 258 8.2E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 RPIT_02435 e49f6e26ff4daeac16a57910c3a80129 267 Pfam PF13432 Tetratricopeptide repeat 176 237 1.2E-7 T 13-10-2018 RPIT_02435 e49f6e26ff4daeac16a57910c3a80129 267 SUPERFAMILY SSF48452 160 240 1.54E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 RPIT_10830 efc2e9bc6aa3ebc085852fb38c9d0b7f 821 SUPERFAMILY SSF50692 693 821 4.52E-41 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily RPIT_10830 efc2e9bc6aa3ebc085852fb38c9d0b7f 821 Pfam PF00384 Molybdopterin oxidoreductase 115 583 1.6E-81 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_10830 efc2e9bc6aa3ebc085852fb38c9d0b7f 821 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 58 76 - T 13-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 RPIT_10830 efc2e9bc6aa3ebc085852fb38c9d0b7f 821 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 737 764 - T 13-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RPIT_10830 efc2e9bc6aa3ebc085852fb38c9d0b7f 821 Gene3D G3DSA:3.40.50.740 49 318 6.3E-82 T 13-10-2018 RPIT_10830 efc2e9bc6aa3ebc085852fb38c9d0b7f 821 Gene3D G3DSA:3.40.228.10 337 415 3.0E-19 T 13-10-2018 RPIT_10830 efc2e9bc6aa3ebc085852fb38c9d0b7f 821 SUPERFAMILY SSF53706 56 702 1.02E-164 T 13-10-2018 RPIT_10830 efc2e9bc6aa3ebc085852fb38c9d0b7f 821 Gene3D G3DSA:2.40.40.20 676 821 7.8E-44 T 13-10-2018 RPIT_10830 efc2e9bc6aa3ebc085852fb38c9d0b7f 821 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 54 112 3.0E-14 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_10830 efc2e9bc6aa3ebc085852fb38c9d0b7f 821 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 16 821 0.0 T 13-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 RPIT_10830 efc2e9bc6aa3ebc085852fb38c9d0b7f 821 Pfam PF01568 Molydopterin dinucleotide binding domain 703 813 1.6E-27 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 RPIT_10830 efc2e9bc6aa3ebc085852fb38c9d0b7f 821 SMART SM00926 53 112 3.1E-12 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_10830 efc2e9bc6aa3ebc085852fb38c9d0b7f 821 Gene3D G3DSA:3.40.50.740 416 633 1.1E-45 T 13-10-2018 RPIT_10095 9d7d9f1551f2963705b2e28ef4fb9473 286 Gene3D G3DSA:3.40.1190.20 4 285 3.4E-40 T 13-10-2018 IPR029056 Ribokinase-like RPIT_10095 9d7d9f1551f2963705b2e28ef4fb9473 286 SUPERFAMILY SSF53613 4 277 3.12E-38 T 13-10-2018 IPR029056 Ribokinase-like RPIT_10095 9d7d9f1551f2963705b2e28ef4fb9473 286 Pfam PF00294 pfkB family carbohydrate kinase 18 279 9.8E-23 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB RPIT_10095 9d7d9f1551f2963705b2e28ef4fb9473 286 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 236 249 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RPIT_02120 a4bf019b13b8e31d42c636604c51989f 79 SUPERFAMILY SSF54285 1 79 1.57E-10 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RPIT_02120 a4bf019b13b8e31d42c636604c51989f 79 Gene3D G3DSA:3.10.20.30 1 79 1.6E-13 T 13-10-2018 IPR012675 Beta-grasp domain superfamily RPIT_02120 a4bf019b13b8e31d42c636604c51989f 79 Pfam PF02597 ThiS family 3 79 7.3E-6 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 RPIT_07175 0a97b5f861281080a1caf6d320317d5e 328 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 185 213 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIT_07175 0a97b5f861281080a1caf6d320317d5e 328 SUPERFAMILY SSF51735 17 231 1.07E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_07175 0a97b5f861281080a1caf6d320317d5e 328 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 103 114 1.6E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_07175 0a97b5f861281080a1caf6d320317d5e 328 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 28 45 1.6E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_07175 0a97b5f861281080a1caf6d320317d5e 328 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 217 1.6E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_07175 0a97b5f861281080a1caf6d320317d5e 328 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 175 1.6E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_07175 0a97b5f861281080a1caf6d320317d5e 328 Pfam PF00106 short chain dehydrogenase 27 173 2.3E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_07175 0a97b5f861281080a1caf6d320317d5e 328 Gene3D G3DSA:3.40.50.720 17 327 6.4E-57 T 13-10-2018 RPIT_07675 ff2599e86902d0387124db2e77026e5d 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 25 40 5.9E-8 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_07675 ff2599e86902d0387124db2e77026e5d 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 5.9E-8 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_07675 ff2599e86902d0387124db2e77026e5d 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 72 87 5.9E-8 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_07675 ff2599e86902d0387124db2e77026e5d 122 Pfam PF01022 Bacterial regulatory protein, arsR family 31 75 9.3E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_07675 ff2599e86902d0387124db2e77026e5d 122 SMART SM00418 23 102 1.3E-11 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_07675 ff2599e86902d0387124db2e77026e5d 122 SUPERFAMILY SSF46785 18 91 8.07E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_07675 ff2599e86902d0387124db2e77026e5d 122 Gene3D G3DSA:1.10.10.10 11 105 4.9E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_05230 e76017deb0fe6fa8274e7eb2213c0b2e 141 PIRSF PIRSF014972 2 141 3.3E-44 T 13-10-2018 IPR025540 Fluoroacetyl-CoA thioesterase RPIT_05230 e76017deb0fe6fa8274e7eb2213c0b2e 141 SUPERFAMILY SSF54637 3 138 2.76E-39 T 13-10-2018 IPR029069 HotDog domain superfamily RPIT_05230 e76017deb0fe6fa8274e7eb2213c0b2e 141 Pfam PF03061 Thioesterase superfamily 43 110 3.2E-5 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 RPIT_05230 e76017deb0fe6fa8274e7eb2213c0b2e 141 Gene3D G3DSA:3.10.129.10 1 138 3.3E-46 T 13-10-2018 RPIT_01150 b0b5372efcd54b79c25fbd22f2cdf64b 129 Gene3D G3DSA:1.10.10.10 13 114 5.6E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_01150 b0b5372efcd54b79c25fbd22f2cdf64b 129 SUPERFAMILY SSF46785 19 93 8.03E-9 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_04805 09074e316f519c81c22e48a63ed36a3d 311 SUPERFAMILY SSF103481 50 127 8.11E-5 T 13-10-2018 RPIT_07950 4b0b40beb4ce2953ff5bbaf05e01f15f 560 SUPERFAMILY SSF47831 36 141 5.89E-16 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 RPIT_07950 4b0b40beb4ce2953ff5bbaf05e01f15f 560 SUPERFAMILY SSF52009 124 239 1.83E-28 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 RPIT_07950 4b0b40beb4ce2953ff5bbaf05e01f15f 560 Gene3D G3DSA:3.20.20.60 234 555 8.4E-89 T 13-10-2018 RPIT_07950 4b0b40beb4ce2953ff5bbaf05e01f15f 560 Pfam PF00391 PEP-utilising enzyme, mobile domain 151 223 2.7E-20 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIT_07950 4b0b40beb4ce2953ff5bbaf05e01f15f 560 Gene3D G3DSA:3.50.30.10 12 232 3.1E-49 T 13-10-2018 RPIT_07950 4b0b40beb4ce2953ff5bbaf05e01f15f 560 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 483 495 7.4E-20 T 13-10-2018 RPIT_07950 4b0b40beb4ce2953ff5bbaf05e01f15f 560 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 7.4E-20 T 13-10-2018 RPIT_07950 4b0b40beb4ce2953ff5bbaf05e01f15f 560 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 286 305 7.4E-20 T 13-10-2018 RPIT_07950 4b0b40beb4ce2953ff5bbaf05e01f15f 560 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 430 445 7.4E-20 T 13-10-2018 RPIT_07950 4b0b40beb4ce2953ff5bbaf05e01f15f 560 SUPERFAMILY SSF51621 248 520 7.33E-81 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 RPIT_07950 4b0b40beb4ce2953ff5bbaf05e01f15f 560 Gene3D G3DSA:1.10.274.10 29 145 3.1E-49 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 RPIT_07950 4b0b40beb4ce2953ff5bbaf05e01f15f 560 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 520 2.1E-71 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RPIT_07950 4b0b40beb4ce2953ff5bbaf05e01f15f 560 Pfam PF05524 PEP-utilising enzyme, N-terminal 11 125 1.9E-18 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RPIT_07950 4b0b40beb4ce2953ff5bbaf05e01f15f 560 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 62 544 1.8E-109 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 RPIT_07950 4b0b40beb4ce2953ff5bbaf05e01f15f 560 PIRSF PIRSF000732 7 557 4.1E-144 T 13-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 RPIT_10240 6fa04a0dfbf6afeba4c7c5a24416f3e3 124 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 7 84 1.5E-12 T 13-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 RPIT_10240 6fa04a0dfbf6afeba4c7c5a24416f3e3 124 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 3 87 2.0E-12 T 13-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 RPIT_02970 1482cd044cd538ae6f3200b4a9a993a1 289 Pfam PF04055 Radical SAM superfamily 71 223 3.0E-28 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIT_02970 1482cd044cd538ae6f3200b4a9a993a1 289 SUPERFAMILY SSF102114 71 264 9.29E-29 T 13-10-2018 RPIT_02970 1482cd044cd538ae6f3200b4a9a993a1 289 ProSitePatterns PS01087 Radical activating enzymes signature. 64 85 - T 13-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 RPIT_02970 1482cd044cd538ae6f3200b4a9a993a1 289 Gene3D G3DSA:3.20.20.70 50 289 9.0E-79 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_02970 1482cd044cd538ae6f3200b4a9a993a1 289 PIRSF PIRSF000371 89 288 7.4E-37 T 13-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 RPIT_02970 1482cd044cd538ae6f3200b4a9a993a1 289 PIRSF PIRSF000371 58 94 2.7E-13 T 13-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 RPIT_02970 1482cd044cd538ae6f3200b4a9a993a1 289 Pfam PF13353 4Fe-4S single cluster domain 62 176 2.6E-17 T 13-10-2018 RPIT_02970 1482cd044cd538ae6f3200b4a9a993a1 289 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 53 283 6.5E-87 T 13-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 RPIT_09885 67f0d8067e717a1ff7038da32fbdc51c 409 SUPERFAMILY SSF56024 45 227 1.32E-38 T 13-10-2018 RPIT_09885 67f0d8067e717a1ff7038da32fbdc51c 409 Pfam PF13091 PLD-like domain 74 200 3.2E-9 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 RPIT_09885 67f0d8067e717a1ff7038da32fbdc51c 409 Pfam PF13091 PLD-like domain 250 375 2.5E-27 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 RPIT_09885 67f0d8067e717a1ff7038da32fbdc51c 409 SMART SM00155 322 349 5.9 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 RPIT_09885 67f0d8067e717a1ff7038da32fbdc51c 409 SMART SM00155 154 181 8.1 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 RPIT_09885 67f0d8067e717a1ff7038da32fbdc51c 409 Gene3D G3DSA:3.30.870.10 232 379 1.5E-27 T 13-10-2018 RPIT_09885 67f0d8067e717a1ff7038da32fbdc51c 409 Gene3D G3DSA:3.30.870.10 52 228 1.7E-36 T 13-10-2018 RPIT_09885 67f0d8067e717a1ff7038da32fbdc51c 409 SUPERFAMILY SSF56024 203 392 3.14E-41 T 13-10-2018 RPIT_05515 b0970cd5f4ddb2061008c9b064ed56a6 417 Pfam PF13439 Glycosyltransferase Family 4 17 219 1.7E-15 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RPIT_05515 b0970cd5f4ddb2061008c9b064ed56a6 417 SUPERFAMILY SSF53756 4 407 8.48E-55 T 13-10-2018 RPIT_05515 b0970cd5f4ddb2061008c9b064ed56a6 417 Pfam PF00534 Glycosyl transferases group 1 242 378 4.8E-16 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 RPIT_05515 b0970cd5f4ddb2061008c9b064ed56a6 417 Gene3D G3DSA:3.40.50.2000 236 398 6.9E-24 T 13-10-2018 RPIT_02130 49908f02544c36a8e28f8abd742ec0b2 1235 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 59 77 - T 13-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 RPIT_02130 49908f02544c36a8e28f8abd742ec0b2 1235 Pfam PF00384 Molybdopterin oxidoreductase 119 832 4.1E-126 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02130 49908f02544c36a8e28f8abd742ec0b2 1235 Pfam PF01568 Molydopterin dinucleotide binding domain 1088 1199 7.4E-18 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 RPIT_02130 49908f02544c36a8e28f8abd742ec0b2 1235 SUPERFAMILY SSF53706 16 1068 0.0 T 13-10-2018 RPIT_02130 49908f02544c36a8e28f8abd742ec0b2 1235 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 19 1228 0.0 T 13-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 RPIT_02130 49908f02544c36a8e28f8abd742ec0b2 1235 Gene3D G3DSA:3.40.50.12440 55 1235 0.0 T 13-10-2018 RPIT_02130 49908f02544c36a8e28f8abd742ec0b2 1235 SMART SM00926 54 116 1.4E-7 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02130 49908f02544c36a8e28f8abd742ec0b2 1235 SUPERFAMILY SSF50692 1083 1229 3.16E-38 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily RPIT_00485 0c4ca8dac148050c7e68f43434725ed4 549 Pfam PF02709 N-terminal domain of galactosyltransferase 10 69 3.6E-9 T 13-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 RPIT_00485 0c4ca8dac148050c7e68f43434725ed4 549 Gene3D G3DSA:3.90.550.10 106 321 1.6E-44 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_00485 0c4ca8dac148050c7e68f43434725ed4 549 Gene3D G3DSA:3.90.550.10 6 99 1.2E-12 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_00485 0c4ca8dac148050c7e68f43434725ed4 549 SUPERFAMILY SSF53448 13 92 1.22E-13 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_00485 0c4ca8dac148050c7e68f43434725ed4 549 Pfam PF00535 Glycosyl transferase family 2 118 242 1.3E-30 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RPIT_00485 0c4ca8dac148050c7e68f43434725ed4 549 SUPERFAMILY SSF53448 115 323 1.77E-52 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_08190 d8960b00eff63a982b8f97a813c8b8db 519 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 105 123 2.2E-20 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 RPIT_08190 d8960b00eff63a982b8f97a813c8b8db 519 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 171 182 2.2E-20 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 RPIT_08190 d8960b00eff63a982b8f97a813c8b8db 519 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 193 202 2.2E-20 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 RPIT_08190 d8960b00eff63a982b8f97a813c8b8db 519 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 71 85 2.2E-20 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 RPIT_08190 d8960b00eff63a982b8f97a813c8b8db 519 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 142 159 2.2E-20 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 RPIT_08190 d8960b00eff63a982b8f97a813c8b8db 519 Gene3D G3DSA:3.90.226.10 236 493 1.3E-62 T 13-10-2018 RPIT_08190 d8960b00eff63a982b8f97a813c8b8db 519 Gene3D G3DSA:3.90.226.10 3 227 2.3E-55 T 13-10-2018 RPIT_08190 d8960b00eff63a982b8f97a813c8b8db 519 SUPERFAMILY SSF52096 5 223 5.71E-53 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily RPIT_08190 d8960b00eff63a982b8f97a813c8b8db 519 Pfam PF01039 Carboxyl transferase domain 38 424 2.5E-49 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 RPIT_08190 d8960b00eff63a982b8f97a813c8b8db 519 SUPERFAMILY SSF52096 239 491 2.25E-45 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily RPIT_13635 1a391c87390c8ad0af39d8f110eb333b 386 SUPERFAMILY SSF55979 2 119 7.12E-24 T 13-10-2018 RPIT_13635 1a391c87390c8ad0af39d8f110eb333b 386 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 260 365 1.0E-20 T 13-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 RPIT_13635 1a391c87390c8ad0af39d8f110eb333b 386 SMART SM00480 17 380 4.9E-91 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 RPIT_13635 1a391c87390c8ad0af39d8f110eb333b 386 Pfam PF02767 DNA polymerase III beta subunit, central domain 127 251 2.8E-22 T 13-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 RPIT_13635 1a391c87390c8ad0af39d8f110eb333b 386 Gene3D G3DSA:3.10.150.10 122 255 8.6E-26 T 13-10-2018 RPIT_13635 1a391c87390c8ad0af39d8f110eb333b 386 Gene3D G3DSA:3.10.150.10 1 121 1.4E-43 T 13-10-2018 RPIT_13635 1a391c87390c8ad0af39d8f110eb333b 386 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 384 4.7E-76 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 RPIT_13635 1a391c87390c8ad0af39d8f110eb333b 386 PIRSF PIRSF000804 1 385 3.3E-78 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 RPIT_13635 1a391c87390c8ad0af39d8f110eb333b 386 Gene3D G3DSA:3.10.150.10 257 386 1.3E-31 T 13-10-2018 RPIT_13635 1a391c87390c8ad0af39d8f110eb333b 386 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 2 118 5.5E-33 T 13-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 RPIT_13635 1a391c87390c8ad0af39d8f110eb333b 386 SUPERFAMILY SSF55979 126 252 7.12E-15 T 13-10-2018 RPIT_13635 1a391c87390c8ad0af39d8f110eb333b 386 SUPERFAMILY SSF55979 259 384 8.64E-20 T 13-10-2018 RPIT_05350 78928348acd6a5fc52614246a2db12de 201 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 99 1.7E-17 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 RPIT_05350 78928348acd6a5fc52614246a2db12de 201 SUPERFAMILY SSF69754 3 104 4.58E-21 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like RPIT_05350 78928348acd6a5fc52614246a2db12de 201 Gene3D G3DSA:3.30.160.100 3 103 8.2E-19 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like RPIT_05350 78928348acd6a5fc52614246a2db12de 201 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 102 2.1E-18 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 RPIT_05350 78928348acd6a5fc52614246a2db12de 201 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 142 195 1.1E-20 T 13-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal RPIT_05350 78928348acd6a5fc52614246a2db12de 201 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 199 20.224 T 13-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid RPIT_05350 78928348acd6a5fc52614246a2db12de 201 Gene3D G3DSA:3.30.505.50 153 200 8.7E-17 T 13-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily RPIT_11840 97aefd9b5b477a08cdb518ac98a340ab 225 Pfam PF02581 Thiamine monophosphate synthase 15 205 2.2E-41 T 13-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RPIT_11840 97aefd9b5b477a08cdb518ac98a340ab 225 Gene3D G3DSA:3.20.20.70 7 222 8.3E-55 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_11840 97aefd9b5b477a08cdb518ac98a340ab 225 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 13 223 21.146 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RPIT_11840 97aefd9b5b477a08cdb518ac98a340ab 225 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 14 218 9.4E-44 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RPIT_11840 97aefd9b5b477a08cdb518ac98a340ab 225 SUPERFAMILY SSF51391 10 222 1.44E-45 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RPIT_04660 8b38b9f087661c51d59b7a77d9c4d9e2 558 Gene3D G3DSA:3.40.50.10710 214 372 2.7E-171 T 13-10-2018 RPIT_04660 8b38b9f087661c51d59b7a77d9c4d9e2 558 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 369 415 2.7E-8 T 13-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain RPIT_04660 8b38b9f087661c51d59b7a77d9c4d9e2 558 SMART SM00849 27 222 5.4E-22 T 13-10-2018 IPR001279 Metallo-beta-lactamase RPIT_04660 8b38b9f087661c51d59b7a77d9c4d9e2 558 Hamap MF_01491 Ribonuclease J [rnj]. 10 558 40.019 T 13-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 RPIT_04660 8b38b9f087661c51d59b7a77d9c4d9e2 558 PIRSF PIRSF004803 8 558 3.4E-203 T 13-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 RPIT_04660 8b38b9f087661c51d59b7a77d9c4d9e2 558 Pfam PF00753 Metallo-beta-lactamase superfamily 24 171 3.7E-13 T 13-10-2018 IPR001279 Metallo-beta-lactamase RPIT_04660 8b38b9f087661c51d59b7a77d9c4d9e2 558 Gene3D G3DSA:3.60.15.10 16 443 2.7E-171 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RPIT_04660 8b38b9f087661c51d59b7a77d9c4d9e2 558 SUPERFAMILY SSF56281 15 431 1.52E-93 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RPIT_04660 8b38b9f087661c51d59b7a77d9c4d9e2 558 Gene3D G3DSA:3.10.20.580 456 557 2.9E-18 T 13-10-2018 RPIT_04660 8b38b9f087661c51d59b7a77d9c4d9e2 558 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 16 555 8.7E-153 T 13-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 RPIT_09490 24c9580855d363d598d922e94b9db320 270 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 270 1.7E-92 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RPIT_09490 24c9580855d363d598d922e94b9db320 270 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 3.8E-40 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RPIT_09490 24c9580855d363d598d922e94b9db320 270 SUPERFAMILY SSF55831 1 270 7.2E-128 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RPIT_09490 24c9580855d363d598d922e94b9db320 270 Hamap MF_00008 Thymidylate synthase [thyA]. 1 270 40.398 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RPIT_09490 24c9580855d363d598d922e94b9db320 270 Pfam PF00303 Thymidylate synthase 2 270 3.6E-123 T 13-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RPIT_09490 24c9580855d363d598d922e94b9db320 270 Gene3D G3DSA:3.30.572.10 1 270 3.1E-129 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RPIT_09490 24c9580855d363d598d922e94b9db320 270 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 13-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RPIT_09490 24c9580855d363d598d922e94b9db320 270 PRINTS PR00108 Thymidylate synthase family signature 203 220 6.8E-50 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RPIT_09490 24c9580855d363d598d922e94b9db320 270 PRINTS PR00108 Thymidylate synthase family signature 115 134 6.8E-50 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RPIT_09490 24c9580855d363d598d922e94b9db320 270 PRINTS PR00108 Thymidylate synthase family signature 42 63 6.8E-50 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RPIT_09490 24c9580855d363d598d922e94b9db320 270 PRINTS PR00108 Thymidylate synthase family signature 141 156 6.8E-50 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RPIT_09490 24c9580855d363d598d922e94b9db320 270 PRINTS PR00108 Thymidylate synthase family signature 165 191 6.8E-50 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RPIT_10175 a56b485d012d3427f47c98716088e2a2 55 Pfam PF11314 Protein of unknown function (DUF3117) 4 53 1.3E-29 T 13-10-2018 IPR021465 Protein of unknown function DUF3117 RPIT_05945 f6e89e5d3f1f4ba19091a9e9f01f330e 150 SUPERFAMILY SSF51261 4 148 6.63E-34 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_05945 f6e89e5d3f1f4ba19091a9e9f01f330e 150 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 4 126 6.5E-36 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RPIT_05945 f6e89e5d3f1f4ba19091a9e9f01f330e 150 Gene3D G3DSA:2.70.70.10 2 149 2.1E-38 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_05825 0033fc0fe78b3f5c1f40990fbf1bd25f 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 270 9.2E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_05825 0033fc0fe78b3f5c1f40990fbf1bd25f 281 SUPERFAMILY SSF161098 10 281 1.68E-73 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_05825 0033fc0fe78b3f5c1f40990fbf1bd25f 281 Gene3D G3DSA:1.10.3720.10 8 272 3.3E-67 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_06125 e43c23e4935f1a85817e0f29126b3092 281 Gene3D G3DSA:3.40.50.10900 12 213 4.9E-76 T 13-10-2018 IPR038389 Proteasome assembly chaperone 2 superfamily RPIT_06125 e43c23e4935f1a85817e0f29126b3092 281 Gene3D G3DSA:1.10.287.100 214 252 4.9E-76 T 13-10-2018 RPIT_06125 e43c23e4935f1a85817e0f29126b3092 281 PIRSF PIRSF028754 1 281 2.7E-81 T 13-10-2018 IPR008492 Protein of unknown function DUF774 RPIT_06125 e43c23e4935f1a85817e0f29126b3092 281 Pfam PF09754 PAC2 family 18 232 2.7E-36 T 13-10-2018 IPR019151 Proteasome assembly chaperone 2 RPIT_06125 e43c23e4935f1a85817e0f29126b3092 281 SUPERFAMILY SSF159659 6 254 5.23E-69 T 13-10-2018 RPIT_11060 9c1f2ee0a3472e8b665f1f4c17ce7472 864 SUPERFAMILY SSF49503 455 560 4.38E-12 T 13-10-2018 IPR008972 Cupredoxin RPIT_11060 9c1f2ee0a3472e8b665f1f4c17ce7472 864 PRINTS PR00695 Copper containing nitrite reductase signature 671 686 1.9E-6 T 13-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 RPIT_11060 9c1f2ee0a3472e8b665f1f4c17ce7472 864 PRINTS PR00695 Copper containing nitrite reductase signature 688 704 1.9E-6 T 13-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 RPIT_11060 9c1f2ee0a3472e8b665f1f4c17ce7472 864 PRINTS PR00695 Copper containing nitrite reductase signature 614 630 1.9E-6 T 13-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 RPIT_11060 9c1f2ee0a3472e8b665f1f4c17ce7472 864 Pfam PF07732 Multicopper oxidase 598 706 2.0E-13 T 13-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 RPIT_11060 9c1f2ee0a3472e8b665f1f4c17ce7472 864 SUPERFAMILY SSF49503 586 722 5.16E-38 T 13-10-2018 IPR008972 Cupredoxin RPIT_11060 9c1f2ee0a3472e8b665f1f4c17ce7472 864 SUPERFAMILY SSF49503 707 863 5.96E-39 T 13-10-2018 IPR008972 Cupredoxin RPIT_11060 9c1f2ee0a3472e8b665f1f4c17ce7472 864 Gene3D G3DSA:2.60.40.420 444 546 2.0E-10 T 13-10-2018 IPR008972 Cupredoxin RPIT_11060 9c1f2ee0a3472e8b665f1f4c17ce7472 864 Gene3D G3DSA:2.60.40.420 705 864 7.4E-53 T 13-10-2018 IPR008972 Cupredoxin RPIT_11060 9c1f2ee0a3472e8b665f1f4c17ce7472 864 Gene3D G3DSA:2.60.40.420 575 704 6.3E-37 T 13-10-2018 IPR008972 Cupredoxin RPIT_14730 48bc5394ed6dfce999efc66a30f86f19 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 304 4.6E-37 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_14730 48bc5394ed6dfce999efc66a30f86f19 306 SUPERFAMILY SSF161098 90 290 1.0E-15 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_14730 48bc5394ed6dfce999efc66a30f86f19 306 Gene3D G3DSA:1.10.3720.10 88 299 1.0E-21 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_10485 2804a4597fc85c1a5ffa63354d756e63 291 Pfam PF00005 ABC transporter 17 164 5.8E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_10485 2804a4597fc85c1a5ffa63354d756e63 291 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_10485 2804a4597fc85c1a5ffa63354d756e63 291 Gene3D G3DSA:3.40.50.300 1 251 3.5E-68 T 13-10-2018 RPIT_10485 2804a4597fc85c1a5ffa63354d756e63 291 SMART SM00382 26 213 8.7E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_10485 2804a4597fc85c1a5ffa63354d756e63 291 SUPERFAMILY SSF52540 1 226 9.26E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_05490 5d654d86e289ce48cef9b51769027508 163 SMART SM00947 23 163 2.4E-13 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RPIT_05490 5d654d86e289ce48cef9b51769027508 163 Pfam PF00484 Carbonic anhydrase 31 96 3.7E-9 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RPIT_05490 5d654d86e289ce48cef9b51769027508 163 SUPERFAMILY SSF53056 3 161 4.58E-27 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 RPIT_05490 5d654d86e289ce48cef9b51769027508 163 Gene3D G3DSA:3.40.1050.10 1 163 7.3E-43 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 RPIT_06975 2ab74c79ba1e0e0b29d5ff913dc9947b 291 Pfam PF00582 Universal stress protein family 157 290 1.1E-8 T 13-10-2018 IPR006016 UspA RPIT_06975 2ab74c79ba1e0e0b29d5ff913dc9947b 291 Pfam PF00582 Universal stress protein family 9 142 1.7E-20 T 13-10-2018 IPR006016 UspA RPIT_06975 2ab74c79ba1e0e0b29d5ff913dc9947b 291 Gene3D G3DSA:3.40.50.12370 7 291 2.0E-51 T 13-10-2018 RPIT_06975 2ab74c79ba1e0e0b29d5ff913dc9947b 291 SUPERFAMILY SSF52402 9 143 1.84E-24 T 13-10-2018 RPIT_06975 2ab74c79ba1e0e0b29d5ff913dc9947b 291 PRINTS PR01438 Universal stress protein signature 103 115 7.2E-13 T 13-10-2018 IPR006015 Universal stress protein A RPIT_06975 2ab74c79ba1e0e0b29d5ff913dc9947b 291 PRINTS PR01438 Universal stress protein signature 6 24 7.2E-13 T 13-10-2018 IPR006015 Universal stress protein A RPIT_06975 2ab74c79ba1e0e0b29d5ff913dc9947b 291 PRINTS PR01438 Universal stress protein signature 121 143 7.2E-13 T 13-10-2018 IPR006015 Universal stress protein A RPIT_06975 2ab74c79ba1e0e0b29d5ff913dc9947b 291 SUPERFAMILY SSF52402 159 290 4.02E-14 T 13-10-2018 RPIT_13645 4a5b94ac2aedaf807fef08b7922be343 381 Gene3D G3DSA:3.40.50.300 6 356 3.0E-89 T 13-10-2018 RPIT_13645 4a5b94ac2aedaf807fef08b7922be343 381 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 356 5.4E-18 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal RPIT_13645 4a5b94ac2aedaf807fef08b7922be343 381 SUPERFAMILY SSF52540 4 349 2.77E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_13645 4a5b94ac2aedaf807fef08b7922be343 381 ProSitePatterns PS00617 RecF protein signature 1. 120 140 - T 13-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 RPIT_13645 4a5b94ac2aedaf807fef08b7922be343 381 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 381 88.287 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 RPIT_13645 4a5b94ac2aedaf807fef08b7922be343 381 ProSitePatterns PS00618 RecF protein signature 2. 324 342 - T 13-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 RPIT_13645 4a5b94ac2aedaf807fef08b7922be343 381 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 2 374 1.6E-104 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 RPIT_13645 4a5b94ac2aedaf807fef08b7922be343 381 Gene3D G3DSA:1.20.1050.90 123 323 3.0E-89 T 13-10-2018 RPIT_13170 c3b9d26e2b7fe386626f332b1a73327e 207 SUPERFAMILY SSF56281 18 200 2.98E-42 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RPIT_13170 c3b9d26e2b7fe386626f332b1a73327e 207 Pfam PF00753 Metallo-beta-lactamase superfamily 24 186 3.5E-20 T 13-10-2018 IPR001279 Metallo-beta-lactamase RPIT_13170 c3b9d26e2b7fe386626f332b1a73327e 207 Gene3D G3DSA:3.60.15.10 19 203 1.7E-48 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RPIT_13170 c3b9d26e2b7fe386626f332b1a73327e 207 SMART SM00849 23 186 1.6E-32 T 13-10-2018 IPR001279 Metallo-beta-lactamase RPIT_13060 3a8672898c60e8de4f1efce737305f97 133 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 33 130 2.6E-7 T 13-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like RPIT_13060 3a8672898c60e8de4f1efce737305f97 133 SUPERFAMILY SSF55961 8 131 5.8E-16 T 13-10-2018 RPIT_13060 3a8672898c60e8de4f1efce737305f97 133 Gene3D G3DSA:3.30.530.20 6 133 7.6E-17 T 13-10-2018 IPR023393 START-like domain superfamily RPIT_05065 65f649dae5490499823954a9bb2324d4 327 Pfam PF00950 ABC 3 transport family 7 260 9.1E-55 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 RPIT_05065 65f649dae5490499823954a9bb2324d4 327 SUPERFAMILY SSF81345 3 255 1.31E-25 T 13-10-2018 IPR037294 ABC transporter, BtuC-like RPIT_05065 65f649dae5490499823954a9bb2324d4 327 Gene3D G3DSA:1.10.3470.10 36 221 1.6E-5 T 13-10-2018 IPR037294 ABC transporter, BtuC-like RPIT_04255 a035f08e66e5f934bf9a06376cff94c9 118 ProSitePatterns PS00202 Rubredoxin signature. 51 61 - T 13-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 RPIT_04255 a035f08e66e5f934bf9a06376cff94c9 118 Gene3D G3DSA:2.20.28.270 3 80 2.2E-12 T 13-10-2018 IPR038638 RbpA superfamily RPIT_04255 a035f08e66e5f934bf9a06376cff94c9 118 Hamap MF_01483 RNA polymerase-binding protein RbpA [rbpA]. 17 113 24.368 T 13-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 RPIT_04255 a035f08e66e5f934bf9a06376cff94c9 118 Pfam PF13397 RNA polymerase-binding protein 5 108 3.3E-40 T 13-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 RPIT_10215 10b983a04673673c8b69ebe242bcba5a 308 TIGRFAM TIGR03535 DapD_actino: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 308 1.7E-147 T 13-10-2018 IPR019875 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, actinobacteria KEGG: 00300+2.3.1.117 RPIT_10215 10b983a04673673c8b69ebe242bcba5a 308 Gene3D G3DSA:2.160.10.10 142 308 1.5E-68 T 13-10-2018 RPIT_10215 10b983a04673673c8b69ebe242bcba5a 308 Gene3D G3DSA:3.30.70.2010 4 100 7.6E-32 T 13-10-2018 RPIT_10215 10b983a04673673c8b69ebe242bcba5a 308 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 101 141 7.6E-14 T 13-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 RPIT_10215 10b983a04673673c8b69ebe242bcba5a 308 Gene3D G3DSA:3.30.60.70 101 141 1.2E-11 T 13-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 RPIT_10215 10b983a04673673c8b69ebe242bcba5a 308 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 3 306 43.147 T 13-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 RPIT_10215 10b983a04673673c8b69ebe242bcba5a 308 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 223 255 7.6E-15 T 13-10-2018 IPR001451 Hexapeptide repeat RPIT_10215 10b983a04673673c8b69ebe242bcba5a 308 SUPERFAMILY SSF51161 65 289 1.3E-35 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily RPIT_01010 3de40bf7ab395d6c71ac7ea2e843b84c 117 Gene3D G3DSA:1.10.10.10 7 115 3.0E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_01010 3de40bf7ab395d6c71ac7ea2e843b84c 117 Pfam PF03551 Transcriptional regulator PadR-like family 20 91 2.6E-21 T 13-10-2018 IPR005149 Transcription regulator PadR, N-terminal RPIT_01010 3de40bf7ab395d6c71ac7ea2e843b84c 117 SUPERFAMILY SSF46785 8 102 1.23E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_13835 151ebbb22e70e4578fe196fa8cfeffbb 333 SUPERFAMILY SSF53448 5 224 1.69E-54 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_13835 151ebbb22e70e4578fe196fa8cfeffbb 333 Gene3D G3DSA:3.90.550.10 2 240 3.8E-53 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_13835 151ebbb22e70e4578fe196fa8cfeffbb 333 Pfam PF00535 Glycosyl transferase family 2 6 123 1.2E-34 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RPIT_02655 046f957701bb5a79b62e41e37402fc7f 437 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 10 412 2.6E-190 T 13-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02655 046f957701bb5a79b62e41e37402fc7f 437 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 331 412 9.7E-30 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02655 046f957701bb5a79b62e41e37402fc7f 437 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 167 182 - T 13-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02655 046f957701bb5a79b62e41e37402fc7f 437 Gene3D G3DSA:3.40.50.11540 53 231 2.6E-78 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02655 046f957701bb5a79b62e41e37402fc7f 437 Gene3D G3DSA:1.20.1440.230 326 419 4.2E-30 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02655 046f957701bb5a79b62e41e37402fc7f 437 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 341 352 - T 13-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02655 046f957701bb5a79b62e41e37402fc7f 437 SMART SM00928 328 373 6.0E-23 T 13-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02655 046f957701bb5a79b62e41e37402fc7f 437 Pfam PF10531 SLBB domain 243 291 1.5E-11 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02655 046f957701bb5a79b62e41e37402fc7f 437 SUPERFAMILY SSF142984 242 323 7.72E-23 T 13-10-2018 RPIT_02655 046f957701bb5a79b62e41e37402fc7f 437 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 48 219 4.0E-47 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02655 046f957701bb5a79b62e41e37402fc7f 437 SUPERFAMILY SSF142019 7 239 6.8E-88 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02655 046f957701bb5a79b62e41e37402fc7f 437 SUPERFAMILY SSF140490 325 414 1.11E-31 T 13-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02655 046f957701bb5a79b62e41e37402fc7f 437 Gene3D G3DSA:3.10.20.600 232 325 3.8E-31 T 13-10-2018 RPIT_05175 d1f36374631cdcacf92d19d7a87624a8 323 Pfam PF00092 von Willebrand factor type A domain 92 242 9.9E-15 T 13-10-2018 IPR002035 von Willebrand factor, type A RPIT_05175 d1f36374631cdcacf92d19d7a87624a8 323 SUPERFAMILY SSF53300 87 285 8.21E-27 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily RPIT_05175 d1f36374631cdcacf92d19d7a87624a8 323 Gene3D G3DSA:3.40.50.410 91 286 4.7E-40 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily RPIT_05175 d1f36374631cdcacf92d19d7a87624a8 323 SMART SM00327 89 284 7.5E-16 T 13-10-2018 IPR002035 von Willebrand factor, type A RPIT_14500 88e47481262d695c537034e777b2befe 102 Pfam PF01250 Ribosomal protein S6 3 92 1.1E-25 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_14500 88e47481262d695c537034e777b2befe 102 ProSitePatterns PS01048 Ribosomal protein S6 signature. 44 53 - T 13-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIT_14500 88e47481262d695c537034e777b2befe 102 Gene3D G3DSA:3.30.70.60 1 100 1.3E-29 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RPIT_14500 88e47481262d695c537034e777b2befe 102 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 4.1E-26 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_14500 88e47481262d695c537034e777b2befe 102 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 20.005 T 13-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIT_14500 88e47481262d695c537034e777b2befe 102 SUPERFAMILY SSF54995 1 96 4.84E-32 T 13-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03685 b79986eea180acb7b3d54e904396ba8e 739 SUPERFAMILY SSF53448 117 511 5.63E-20 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_03685 b79986eea180acb7b3d54e904396ba8e 739 Gene3D G3DSA:3.90.550.10 334 486 1.6E-22 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_03685 b79986eea180acb7b3d54e904396ba8e 739 Pfam PF13632 Glycosyl transferase family group 2 348 572 4.9E-28 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RPIT_04940 49841a786d2e4dd571fd52c61b364139 208 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 11 96 2.5E-10 T 13-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 RPIT_04940 49841a786d2e4dd571fd52c61b364139 208 SUPERFAMILY SSF109854 3 126 1.13E-13 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes RPIT_04940 49841a786d2e4dd571fd52c61b364139 208 Gene3D G3DSA:1.20.120.450 1 95 6.0E-11 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes RPIT_04940 49841a786d2e4dd571fd52c61b364139 208 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 10 188 4.4E-28 T 13-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type RPIT_08240 db464166688c02179c70d71d329c37c3 355 SUPERFAMILY SSF48264 10 336 3.01E-59 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 RPIT_08240 db464166688c02179c70d71d329c37c3 355 Gene3D G3DSA:1.10.630.10 2 354 3.4E-69 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 RPIT_08240 db464166688c02179c70d71d329c37c3 355 PRINTS PR00359 B-class P450 signature 297 306 1.6E-21 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RPIT_08240 db464166688c02179c70d71d329c37c3 355 PRINTS PR00359 B-class P450 signature 231 242 1.6E-21 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RPIT_08240 db464166688c02179c70d71d329c37c3 355 PRINTS PR00359 B-class P450 signature 42 53 1.6E-21 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RPIT_08240 db464166688c02179c70d71d329c37c3 355 PRINTS PR00359 B-class P450 signature 248 275 1.6E-21 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RPIT_08240 db464166688c02179c70d71d329c37c3 355 PRINTS PR00359 B-class P450 signature 276 291 1.6E-21 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RPIT_08240 db464166688c02179c70d71d329c37c3 355 PRINTS PR00359 B-class P450 signature 306 317 1.6E-21 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 RPIT_08240 db464166688c02179c70d71d329c37c3 355 Pfam PF00067 Cytochrome P450 135 324 2.0E-18 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 RPIT_12775 d3a58c7af0c308c90a17eaa3eba83d55 237 SUPERFAMILY SSF47413 10 75 2.39E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_12775 d3a58c7af0c308c90a17eaa3eba83d55 237 Pfam PF07883 Cupin domain 127 196 1.4E-14 T 13-10-2018 IPR013096 Cupin 2, conserved barrel RPIT_12775 d3a58c7af0c308c90a17eaa3eba83d55 237 SMART SM00530 14 69 6.7E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_12775 d3a58c7af0c308c90a17eaa3eba83d55 237 SUPERFAMILY SSF51182 78 200 2.32E-21 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily RPIT_12775 d3a58c7af0c308c90a17eaa3eba83d55 237 Gene3D G3DSA:1.10.260.40 8 79 4.0E-16 T 13-10-2018 RPIT_12775 d3a58c7af0c308c90a17eaa3eba83d55 237 Pfam PF13560 Helix-turn-helix domain 10 65 5.4E-11 T 13-10-2018 RPIT_12775 d3a58c7af0c308c90a17eaa3eba83d55 237 Gene3D G3DSA:2.60.120.10 89 211 1.7E-19 T 13-10-2018 IPR014710 RmlC-like jelly roll fold RPIT_04040 42c93ee491cd3c83403068fa15dc40a3 237 Pfam PF08478 POTRA domain, FtsQ-type 49 116 3.4E-13 T 13-10-2018 IPR013685 POTRA domain, FtsQ-type RPIT_04040 42c93ee491cd3c83403068fa15dc40a3 237 Pfam PF03799 Cell division protein FtsQ 126 221 4.0E-7 T 13-10-2018 IPR005548 Cell division protein FtsQ/DivIB RPIT_06580 f2921aefe589e69ae3a412c4a42bf0de 840 Gene3D G3DSA:3.20.20.80 614 754 4.9E-27 T 13-10-2018 RPIT_06580 f2921aefe589e69ae3a412c4a42bf0de 840 Gene3D G3DSA:3.20.20.80 501 575 8.4E-6 T 13-10-2018 RPIT_06580 f2921aefe589e69ae3a412c4a42bf0de 840 Gene3D G3DSA:3.20.20.80 192 359 2.1E-35 T 13-10-2018 RPIT_06580 f2921aefe589e69ae3a412c4a42bf0de 840 Gene3D G3DSA:3.20.20.80 5 123 2.2E-30 T 13-10-2018 RPIT_06580 f2921aefe589e69ae3a412c4a42bf0de 840 Pfam PF00128 Alpha amylase, catalytic domain 25 96 7.2E-15 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_06580 f2921aefe589e69ae3a412c4a42bf0de 840 SUPERFAMILY SSF51445 5 752 7.84E-112 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_06580 f2921aefe589e69ae3a412c4a42bf0de 840 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 5 838 2.5E-254 T 13-10-2018 IPR012767 Maltooligosyl trehalose synthase KEGG: 00500+5.4.99.15|MetaCyc: PWY-2661 RPIT_06580 f2921aefe589e69ae3a412c4a42bf0de 840 SMART SM00642 2 389 7.6E-6 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_13100 40a345ca94d153db8d446e2ce18d9797 752 SUPERFAMILY SSF56601 229 645 1.99E-79 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like RPIT_13100 40a345ca94d153db8d446e2ce18d9797 752 Gene3D G3DSA:1.10.3810.10 60 258 2.4E-63 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RPIT_13100 40a345ca94d153db8d446e2ce18d9797 752 Gene3D G3DSA:3.40.710.10 274 655 7.6E-91 T 13-10-2018 RPIT_13100 40a345ca94d153db8d446e2ce18d9797 752 Pfam PF00912 Transglycosylase 70 243 5.5E-54 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RPIT_13100 40a345ca94d153db8d446e2ce18d9797 752 Pfam PF00905 Penicillin binding protein transpeptidase domain 348 594 2.0E-34 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RPIT_13100 40a345ca94d153db8d446e2ce18d9797 752 SUPERFAMILY SSF53955 57 260 2.45E-61 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily RPIT_04550 b89972238c4e2453cd3d0db0eb6b3407 277 SUPERFAMILY SSF55729 139 272 2.7E-15 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_04550 b89972238c4e2453cd3d0db0eb6b3407 277 Pfam PF13312 Domain of unknown function (DUF4081) 45 151 7.7E-21 T 13-10-2018 IPR025289 Domain of unknown function DUF4081 RPIT_04550 b89972238c4e2453cd3d0db0eb6b3407 277 Gene3D G3DSA:3.40.630.30 93 275 6.9E-18 T 13-10-2018 RPIT_04550 b89972238c4e2453cd3d0db0eb6b3407 277 Pfam PF08445 FR47-like protein 211 269 9.9E-5 T 13-10-2018 IPR013653 FR47-like GO:0016747 RPIT_10765 4445bff796c0ffaa79216e9b63af6c93 313 SMART SM00382 31 215 2.8E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_10765 4445bff796c0ffaa79216e9b63af6c93 313 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_10765 4445bff796c0ffaa79216e9b63af6c93 313 Gene3D G3DSA:3.40.50.300 2 250 6.3E-56 T 13-10-2018 RPIT_10765 4445bff796c0ffaa79216e9b63af6c93 313 Pfam PF00005 ABC transporter 23 167 1.2E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_10765 4445bff796c0ffaa79216e9b63af6c93 313 SUPERFAMILY SSF52540 4 229 2.66E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_12265 6ead42a4dfdaec11e4bc96223a0ba537 207 TIGRFAM TIGR03941 tRNA_deam_assoc: putative tRNA adenosine deaminase-associated protein 57 201 1.2E-32 T 13-10-2018 IPR023869 tRNA adenosine deaminase-associated protein, putative RPIT_04405 646ea305ce3a93efbcd779e614b89b1c 655 Gene3D G3DSA:3.20.20.80 88 579 1.0E-153 T 13-10-2018 RPIT_04405 646ea305ce3a93efbcd779e614b89b1c 655 SMART SM00642 96 529 2.8E-122 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_04405 646ea305ce3a93efbcd779e614b89b1c 655 Gene3D G3DSA:3.90.400.10 188 257 1.0E-153 T 13-10-2018 RPIT_04405 646ea305ce3a93efbcd779e614b89b1c 655 Pfam PF00128 Alpha amylase, catalytic domain 111 485 3.3E-85 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_04405 646ea305ce3a93efbcd779e614b89b1c 655 SUPERFAMILY SSF51445 86 585 8.64E-129 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_05580 e26c54775777bd5d51404f5f959f9765 119 Gene3D G3DSA:3.40.50.720 1 111 3.7E-20 T 13-10-2018 RPIT_05580 e26c54775777bd5d51404f5f959f9765 119 Pfam PF02254 TrkA-N domain 3 94 1.1E-12 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RPIT_05580 e26c54775777bd5d51404f5f959f9765 119 SUPERFAMILY SSF51735 2 105 5.81E-9 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_01930 16ea98cfa60bdb0caddfd95200269f70 463 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 223 457 2.1E-41 T 13-10-2018 RPIT_01930 16ea98cfa60bdb0caddfd95200269f70 463 Gene3D G3DSA:3.40.50.720 24 209 4.2E-34 T 13-10-2018 RPIT_01930 16ea98cfa60bdb0caddfd95200269f70 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 292 303 4.0E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01930 16ea98cfa60bdb0caddfd95200269f70 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 369 388 4.0E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01930 16ea98cfa60bdb0caddfd95200269f70 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 343 359 4.0E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01930 16ea98cfa60bdb0caddfd95200269f70 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 235 4.0E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01930 16ea98cfa60bdb0caddfd95200269f70 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 390 407 4.0E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01930 16ea98cfa60bdb0caddfd95200269f70 463 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 423 443 4.0E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01930 16ea98cfa60bdb0caddfd95200269f70 463 SUPERFAMILY SSF51735 213 459 5.68E-54 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_01930 16ea98cfa60bdb0caddfd95200269f70 463 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 217 405 0.0019 T 13-10-2018 RPIT_01930 16ea98cfa60bdb0caddfd95200269f70 463 Gene3D G3DSA:3.40.50.720 212 462 4.1E-60 T 13-10-2018 RPIT_14550 71c98d889866dfbc7086896eb8b48081 136 SUPERFAMILY SSF55729 1 130 1.18E-30 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_14550 71c98d889866dfbc7086896eb8b48081 136 Gene3D G3DSA:3.40.630.30 1 135 2.1E-38 T 13-10-2018 RPIT_14550 71c98d889866dfbc7086896eb8b48081 136 Pfam PF00583 Acetyltransferase (GNAT) family 18 123 3.5E-19 T 13-10-2018 IPR000182 GNAT domain RPIT_01160 5f6c622618c5a29efc84b069f6c1fd5f 85 Gene3D G3DSA:1.10.1660.10 12 67 1.3E-20 T 13-10-2018 RPIT_01160 5f6c622618c5a29efc84b069f6c1fd5f 85 SUPERFAMILY SSF46955 16 63 7.14E-5 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily RPIT_01160 5f6c622618c5a29efc84b069f6c1fd5f 85 Pfam PF12728 Helix-turn-helix domain 16 63 1.8E-8 T 13-10-2018 RPIT_01160 5f6c622618c5a29efc84b069f6c1fd5f 85 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 16 61 1.7E-9 T 13-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 RPIT_08780 03a9abe0c4237b35264d868fd3afa14d 269 SUPERFAMILY SSF52833 84 235 2.44E-20 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_08780 03a9abe0c4237b35264d868fd3afa14d 269 Gene3D G3DSA:3.40.30.10 51 268 1.3E-36 T 13-10-2018 RPIT_08780 03a9abe0c4237b35264d868fd3afa14d 269 Pfam PF13462 Thioredoxin 87 235 4.5E-16 T 13-10-2018 IPR012336 Thioredoxin-like fold RPIT_09850 60a414fa697d744a39c7c9b7dd694fdd 191 SUPERFAMILY SSF53328 4 186 1.18E-54 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIT_09850 60a414fa697d744a39c7c9b7dd694fdd 191 Gene3D G3DSA:3.40.50.170 1 190 1.9E-69 T 13-10-2018 RPIT_09850 60a414fa697d744a39c7c9b7dd694fdd 191 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 13-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIT_09850 60a414fa697d744a39c7c9b7dd694fdd 191 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 4 189 28.067 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 RPIT_09850 60a414fa697d744a39c7c9b7dd694fdd 191 Pfam PF00551 Formyl transferase 4 183 1.7E-50 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIT_09850 60a414fa697d744a39c7c9b7dd694fdd 191 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 4 186 2.5E-63 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 RPIT_07035 d632b225e21f90a72788f3634dd0039c 245 Hamap MF_00015 LexA repressor [lexA]. 37 245 31.634 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RPIT_07035 d632b225e21f90a72788f3634dd0039c 245 Gene3D G3DSA:2.10.109.10 130 245 1.8E-40 T 13-10-2018 RPIT_07035 d632b225e21f90a72788f3634dd0039c 245 SUPERFAMILY SSF51306 127 243 6.45E-35 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily RPIT_07035 d632b225e21f90a72788f3634dd0039c 245 TIGRFAM TIGR00498 lexA: repressor LexA 37 245 7.8E-71 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RPIT_07035 d632b225e21f90a72788f3634dd0039c 245 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 172 183 3.1E-10 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RPIT_07035 d632b225e21f90a72788f3634dd0039c 245 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 200 212 3.1E-10 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RPIT_07035 d632b225e21f90a72788f3634dd0039c 245 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 161 171 3.1E-10 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RPIT_07035 d632b225e21f90a72788f3634dd0039c 245 Pfam PF00717 Peptidase S24-like 164 228 1.2E-15 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C RPIT_07035 d632b225e21f90a72788f3634dd0039c 245 Gene3D G3DSA:1.10.10.10 37 102 1.3E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_07035 d632b225e21f90a72788f3634dd0039c 245 SUPERFAMILY SSF46785 37 102 5.07E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_07035 d632b225e21f90a72788f3634dd0039c 245 Pfam PF01726 LexA DNA binding domain 36 99 3.8E-24 T 13-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 RPIT_09555 7d456c34c7c824fdc05b961b73564888 465 SUPERFAMILY SSF52283 2 465 2.49E-119 T 13-10-2018 RPIT_09555 7d456c34c7c824fdc05b961b73564888 465 SMART SM00996 2 464 0.0 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 RPIT_09555 7d456c34c7c824fdc05b961b73564888 465 Gene3D G3DSA:3.40.50.720 226 386 2.8E-238 T 13-10-2018 RPIT_09555 7d456c34c7c824fdc05b961b73564888 465 PIRSF PIRSF001109 1 465 6.6E-197 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 RPIT_09555 7d456c34c7c824fdc05b961b73564888 465 SUPERFAMILY SSF51735 223 385 6.74E-77 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_09555 7d456c34c7c824fdc05b961b73564888 465 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 245 261 - T 13-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 RPIT_09555 7d456c34c7c824fdc05b961b73564888 465 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 1 457 49.223 T 13-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 RPIT_09555 7d456c34c7c824fdc05b961b73564888 465 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 223 385 3.2E-82 T 13-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 RPIT_09555 7d456c34c7c824fdc05b961b73564888 465 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 74 88 - T 13-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 RPIT_09555 7d456c34c7c824fdc05b961b73564888 465 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 3 457 2.9E-195 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 RPIT_09555 7d456c34c7c824fdc05b961b73564888 465 SMART SM00997 223 385 1.4E-109 T 13-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 RPIT_09555 7d456c34c7c824fdc05b961b73564888 465 Gene3D G3DSA:3.40.50.1480 5 465 2.8E-238 T 13-10-2018 RPIT_09555 7d456c34c7c824fdc05b961b73564888 465 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 2 464 8.2E-149 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 RPIT_03480 104ad97f06c12f2ee9fa3539539216c5 310 Gene3D G3DSA:3.10.620.30 96 287 1.9E-43 T 13-10-2018 RPIT_03480 104ad97f06c12f2ee9fa3539539216c5 310 Pfam PF01841 Transglutaminase-like superfamily 150 247 4.4E-18 T 13-10-2018 IPR002931 Transglutaminase-like RPIT_03480 104ad97f06c12f2ee9fa3539539216c5 310 SUPERFAMILY SSF54001 117 274 1.23E-37 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily RPIT_03480 104ad97f06c12f2ee9fa3539539216c5 310 SMART SM00460 179 249 7.1E-17 T 13-10-2018 IPR002931 Transglutaminase-like RPIT_03480 104ad97f06c12f2ee9fa3539539216c5 310 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 6 85 1.6E-17 T 13-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal RPIT_02325 9f316fb6e9fd912b73c1ef5f4e6c2b6a 409 Gene3D G3DSA:1.10.260.40 358 408 2.3E-5 T 13-10-2018 RPIT_02325 9f316fb6e9fd912b73c1ef5f4e6c2b6a 409 Pfam PF01548 Transposase 16 162 4.2E-18 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RPIT_02325 9f316fb6e9fd912b73c1ef5f4e6c2b6a 409 SUPERFAMILY SSF47413 359 406 1.42E-5 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_02325 9f316fb6e9fd912b73c1ef5f4e6c2b6a 409 Pfam PF02371 Transposase IS116/IS110/IS902 family 240 319 1.3E-16 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RPIT_09945 0cef5af9f7227de2a08f256800de2193 97 TIGRFAM TIGR01795 CM_mono_cladeE: chorismate mutase 5 95 2.9E-44 T 13-10-2018 IPR010951 Chorismate mutase, bacteria RPIT_09945 0cef5af9f7227de2a08f256800de2193 97 Pfam PF01817 Chorismate mutase type II 12 87 2.3E-17 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RPIT_09945 0cef5af9f7227de2a08f256800de2193 97 SUPERFAMILY SSF48600 5 91 5.19E-24 T 13-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RPIT_09945 0cef5af9f7227de2a08f256800de2193 97 Gene3D G3DSA:1.20.59.10 1 97 1.6E-39 T 13-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RPIT_09945 0cef5af9f7227de2a08f256800de2193 97 SMART SM00830 12 92 1.9E-21 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RPIT_04855 f0ed4e98ac88fef4085677f0476f5883 321 SUPERFAMILY SSF52540 53 191 6.88E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04855 f0ed4e98ac88fef4085677f0476f5883 321 Gene3D G3DSA:3.40.50.300 3 122 1.4E-8 T 13-10-2018 RPIT_04855 f0ed4e98ac88fef4085677f0476f5883 321 Pfam PF06144 DNA polymerase III, delta subunit 48 173 1.2E-8 T 13-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 RPIT_04855 f0ed4e98ac88fef4085677f0476f5883 321 Gene3D G3DSA:1.20.272.10 195 321 1.7E-18 T 13-10-2018 RPIT_04855 f0ed4e98ac88fef4085677f0476f5883 321 Gene3D G3DSA:1.10.8.60 129 194 3.2E-6 T 13-10-2018 RPIT_04855 f0ed4e98ac88fef4085677f0476f5883 321 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 9 314 2.9E-34 T 13-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 RPIT_04855 f0ed4e98ac88fef4085677f0476f5883 321 SUPERFAMILY SSF48019 197 313 1.28E-13 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 RPIT_02520 6a39b70048b4a0316e62f46c1804b04a 574 SMART SM00642 25 437 5.2E-145 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_02520 6a39b70048b4a0316e62f46c1804b04a 574 Pfam PF00128 Alpha amylase, catalytic domain 40 394 6.7E-109 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_02520 6a39b70048b4a0316e62f46c1804b04a 574 Gene3D G3DSA:2.60.40.1180 499 572 2.1E-13 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta RPIT_02520 6a39b70048b4a0316e62f46c1804b04a 574 Pfam PF11941 Domain of unknown function (DUF3459) 482 567 2.3E-6 T 13-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) RPIT_02520 6a39b70048b4a0316e62f46c1804b04a 574 SUPERFAMILY SSF51445 17 491 1.63E-143 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_02520 6a39b70048b4a0316e62f46c1804b04a 574 SUPERFAMILY SSF51011 498 571 1.57E-12 T 13-10-2018 RPIT_02520 6a39b70048b4a0316e62f46c1804b04a 574 Gene3D G3DSA:3.90.400.10 117 192 1.6E-184 T 13-10-2018 RPIT_02520 6a39b70048b4a0316e62f46c1804b04a 574 Gene3D G3DSA:3.20.20.80 17 489 1.6E-184 T 13-10-2018 RPIT_14750 990d7d7a5aaa764c14a24a3efc2a6673 105 Gene3D G3DSA:1.10.10.10 7 98 3.3E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_14750 990d7d7a5aaa764c14a24a3efc2a6673 105 Pfam PF12840 Helix-turn-helix domain 20 77 1.9E-14 T 13-10-2018 RPIT_14750 990d7d7a5aaa764c14a24a3efc2a6673 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 21 36 4.0E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_14750 990d7d7a5aaa764c14a24a3efc2a6673 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 4.0E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_14750 990d7d7a5aaa764c14a24a3efc2a6673 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 51 4.0E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_14750 990d7d7a5aaa764c14a24a3efc2a6673 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 4.0E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_14750 990d7d7a5aaa764c14a24a3efc2a6673 105 SUPERFAMILY SSF46785 13 95 1.53E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_14750 990d7d7a5aaa764c14a24a3efc2a6673 105 SMART SM00418 19 96 3.4E-22 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_06430 5b84dbb072ed66ac969fa07b184d09a4 273 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 13 260 9.5E-52 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RPIT_06430 5b84dbb072ed66ac969fa07b184d09a4 273 Gene3D G3DSA:3.20.20.70 3 272 7.0E-71 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_06430 5b84dbb072ed66ac969fa07b184d09a4 273 Pfam PF00290 Tryptophan synthase alpha chain 10 264 9.2E-59 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RPIT_06430 5b84dbb072ed66ac969fa07b184d09a4 273 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 267 28.185 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RPIT_06430 5b84dbb072ed66ac969fa07b184d09a4 273 SUPERFAMILY SSF51366 3 261 2.54E-65 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 RPIT_06430 5b84dbb072ed66ac969fa07b184d09a4 273 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 52 65 - T 13-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RPIT_06300 b24598d502d0acce03a3531be1a424b6 180 Pfam PF00156 Phosphoribosyl transferase domain 46 156 4.6E-17 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIT_06300 b24598d502d0acce03a3531be1a424b6 180 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 13 175 2.0E-60 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 RPIT_06300 b24598d502d0acce03a3531be1a424b6 180 Gene3D G3DSA:3.40.50.2020 1 179 8.2E-60 T 13-10-2018 RPIT_06300 b24598d502d0acce03a3531be1a424b6 180 SUPERFAMILY SSF53271 14 175 1.28E-48 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like RPIT_06300 b24598d502d0acce03a3531be1a424b6 180 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 179 34.219 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 RPIT_11975 052e55324dceb880aac5c308eeba8598 385 SUPERFAMILY SSF53822 60 368 2.19E-53 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_11975 052e55324dceb880aac5c308eeba8598 385 Gene3D G3DSA:3.40.50.2300 165 372 8.2E-102 T 13-10-2018 RPIT_11975 052e55324dceb880aac5c308eeba8598 385 Gene3D G3DSA:3.40.50.2300 63 355 8.2E-102 T 13-10-2018 RPIT_11975 052e55324dceb880aac5c308eeba8598 385 Pfam PF13407 Periplasmic binding protein domain 63 333 6.3E-56 T 13-10-2018 IPR025997 Periplasmic binding protein RPIT_08590 d7d10df34d3e596148c57c29ca53d062 174 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 6 169 19.64 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RPIT_08590 d7d10df34d3e596148c57c29ca53d062 174 SUPERFAMILY SSF50447 7 86 3.0E-13 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily RPIT_08590 d7d10df34d3e596148c57c29ca53d062 174 Gene3D G3DSA:2.30.30.240 95 173 4.7E-11 T 13-10-2018 RPIT_08590 d7d10df34d3e596148c57c29ca53d062 174 Gene3D G3DSA:2.40.30.60 6 93 2.0E-17 T 13-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 RPIT_08590 d7d10df34d3e596148c57c29ca53d062 174 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 7 164 5.8E-34 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RPIT_08590 d7d10df34d3e596148c57c29ca53d062 174 SUPERFAMILY SSF50346 99 163 3.14E-13 T 13-10-2018 IPR011033 PRC-barrel-like superfamily RPIT_08590 d7d10df34d3e596148c57c29ca53d062 174 Pfam PF01782 RimM N-terminal domain 9 86 8.2E-18 T 13-10-2018 IPR002676 RimM, N-terminal GO:0006364 RPIT_02110 958f43cc035c0298eb0d90b71c62e3d2 560 Pfam PF01636 Phosphotransferase enzyme family 256 300 3.1E-6 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase RPIT_02110 958f43cc035c0298eb0d90b71c62e3d2 560 Gene3D G3DSA:3.30.200.20 196 238 9.3E-7 T 13-10-2018 RPIT_02110 958f43cc035c0298eb0d90b71c62e3d2 560 Gene3D G3DSA:1.10.510.10 239 305 9.3E-7 T 13-10-2018 RPIT_02110 958f43cc035c0298eb0d90b71c62e3d2 560 SUPERFAMILY SSF56112 86 317 6.59E-29 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily RPIT_02110 958f43cc035c0298eb0d90b71c62e3d2 560 Pfam PF03109 ABC1 family 104 220 1.2E-29 T 13-10-2018 IPR004147 UbiB domain RPIT_12780 2b136751f58824bf080f7e919f3f1266 242 SUPERFAMILY SSF46785 161 234 5.17E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_12780 2b136751f58824bf080f7e919f3f1266 242 Gene3D G3DSA:1.10.10.10 159 236 1.7E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_12780 2b136751f58824bf080f7e919f3f1266 242 Gene3D G3DSA:3.90.79.10 27 158 2.4E-26 T 13-10-2018 RPIT_12780 2b136751f58824bf080f7e919f3f1266 242 SUPERFAMILY SSF55811 30 157 5.01E-24 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 RPIT_12780 2b136751f58824bf080f7e919f3f1266 242 Pfam PF00293 NUDIX domain 25 143 8.0E-9 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 RPIT_14465 ac42f30e82e258a1b0c9a54ebfaaa2b4 141 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 105 3.7E-27 T 13-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like RPIT_11675 e108c92b3508008934d79e5d4b43b76e 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 294 2.2E-14 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_11675 e108c92b3508008934d79e5d4b43b76e 305 SUPERFAMILY SSF161098 66 289 3.14E-49 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_11675 e108c92b3508008934d79e5d4b43b76e 305 Gene3D G3DSA:1.10.3720.10 62 300 9.1E-58 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_04455 e5695a80e019881340d32ae03ca605e5 318 Gene3D G3DSA:1.20.1530.20 6 318 3.0E-29 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily RPIT_04455 e5695a80e019881340d32ae03ca605e5 318 PIRSF PIRSF026166 1 318 1.1E-96 T 13-10-2018 IPR016833 Putative sodium bile acid cotransporter RPIT_04455 e5695a80e019881340d32ae03ca605e5 318 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 9 313 6.8E-77 T 13-10-2018 IPR016833 Putative sodium bile acid cotransporter RPIT_10585 3538e5ac2f675f3ea8c29d89c4c8ecbc 225 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 60 69 - T 13-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RPIT_10585 3538e5ac2f675f3ea8c29d89c4c8ecbc 225 SMART SM00987 52 211 1.1E-25 T 13-10-2018 RPIT_10585 3538e5ac2f675f3ea8c29d89c4c8ecbc 225 Gene3D G3DSA:3.40.470.10 1 224 8.9E-82 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RPIT_10585 3538e5ac2f675f3ea8c29d89c4c8ecbc 225 Pfam PF03167 Uracil DNA glycosylase superfamily 57 209 3.3E-17 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RPIT_10585 3538e5ac2f675f3ea8c29d89c4c8ecbc 225 SMART SM00986 52 211 1.1E-25 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RPIT_10585 3538e5ac2f675f3ea8c29d89c4c8ecbc 225 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 10 222 32.93 T 13-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RPIT_10585 3538e5ac2f675f3ea8c29d89c4c8ecbc 225 SUPERFAMILY SSF52141 8 223 3.49E-72 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RPIT_03050 f9f37d8c9ca77b9068d447994161b2eb 97 SUPERFAMILY SSF54189 2 94 4.68E-33 T 13-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03050 f9f37d8c9ca77b9068d447994161b2eb 97 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 5 94 22.356 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RPIT_03050 f9f37d8c9ca77b9068d447994161b2eb 97 Pfam PF00276 Ribosomal protein L23 6 91 6.3E-32 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RPIT_03050 f9f37d8c9ca77b9068d447994161b2eb 97 Gene3D G3DSA:3.30.70.330 1 95 4.7E-34 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily RPIT_01200 6f5e82e010a228870cbae388165fa628 771 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 322 451 6.9E-13 T 13-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 RPIT_01200 6f5e82e010a228870cbae388165fa628 771 SUPERFAMILY SSF48019 335 451 4.51E-18 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 RPIT_01200 6f5e82e010a228870cbae388165fa628 771 Gene3D G3DSA:3.40.50.300 100 266 9.3E-96 T 13-10-2018 RPIT_01200 6f5e82e010a228870cbae388165fa628 771 Pfam PF13177 DNA polymerase III, delta subunit 107 265 9.1E-39 T 13-10-2018 RPIT_01200 6f5e82e010a228870cbae388165fa628 771 Gene3D G3DSA:1.10.8.60 95 318 9.3E-96 T 13-10-2018 RPIT_01200 6f5e82e010a228870cbae388165fa628 771 SUPERFAMILY SSF52540 119 308 9.3E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01200 6f5e82e010a228870cbae388165fa628 771 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 92 450 1.1E-117 T 13-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 RPIT_01200 6f5e82e010a228870cbae388165fa628 771 SMART SM00382 124 272 1.2E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_14135 0c26a460729b3445fe4d1cbe26f06f6c 225 SMART SM00419 166 215 4.9E-12 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIT_14135 0c26a460729b3445fe4d1cbe26f06f6c 225 SMART SM00100 12 130 1.7E-16 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain RPIT_14135 0c26a460729b3445fe4d1cbe26f06f6c 225 SUPERFAMILY SSF51206 7 143 3.4E-31 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like RPIT_14135 0c26a460729b3445fe4d1cbe26f06f6c 225 Pfam PF13545 Crp-like helix-turn-helix domain 151 219 8.7E-19 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIT_14135 0c26a460729b3445fe4d1cbe26f06f6c 225 Gene3D G3DSA:2.60.120.10 3 146 5.0E-30 T 13-10-2018 IPR014710 RmlC-like jelly roll fold RPIT_14135 0c26a460729b3445fe4d1cbe26f06f6c 225 Gene3D G3DSA:1.10.10.10 147 221 4.4E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_14135 0c26a460729b3445fe4d1cbe26f06f6c 225 Pfam PF00027 Cyclic nucleotide-binding domain 34 118 4.9E-16 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain RPIT_14135 0c26a460729b3445fe4d1cbe26f06f6c 225 SUPERFAMILY SSF46785 148 222 3.83E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_14135 0c26a460729b3445fe4d1cbe26f06f6c 225 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 172 188 2.5E-5 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIT_14135 0c26a460729b3445fe4d1cbe26f06f6c 225 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 188 203 2.5E-5 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIT_04970 4db42d01b3b4aa08606ed7aeea31ea7f 385 Gene3D G3DSA:2.10.230.10 142 206 4.0E-32 T 13-10-2018 RPIT_04970 4db42d01b3b4aa08606ed7aeea31ea7f 385 SUPERFAMILY SSF46565 3 90 9.42E-30 T 13-10-2018 IPR036869 Chaperone J-domain superfamily RPIT_04970 4db42d01b3b4aa08606ed7aeea31ea7f 385 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 13-10-2018 IPR018253 DnaJ domain, conserved site RPIT_04970 4db42d01b3b4aa08606ed7aeea31ea7f 385 Gene3D G3DSA:2.60.260.20 112 248 4.0E-32 T 13-10-2018 RPIT_04970 4db42d01b3b4aa08606ed7aeea31ea7f 385 SUPERFAMILY SSF49493 258 353 1.19E-19 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RPIT_04970 4db42d01b3b4aa08606ed7aeea31ea7f 385 SUPERFAMILY SSF49493 109 261 1.96E-17 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RPIT_04970 4db42d01b3b4aa08606ed7aeea31ea7f 385 SMART SM00271 3 60 2.1E-27 T 13-10-2018 IPR001623 DnaJ domain RPIT_04970 4db42d01b3b4aa08606ed7aeea31ea7f 385 Pfam PF01556 DnaJ C terminal domain 117 342 5.0E-32 T 13-10-2018 IPR002939 Chaperone DnaJ, C-terminal RPIT_04970 4db42d01b3b4aa08606ed7aeea31ea7f 385 PRINTS PR00625 DnaJ domain signature 40 60 7.7E-22 T 13-10-2018 IPR001623 DnaJ domain RPIT_04970 4db42d01b3b4aa08606ed7aeea31ea7f 385 PRINTS PR00625 DnaJ domain signature 60 79 7.7E-22 T 13-10-2018 IPR001623 DnaJ domain RPIT_04970 4db42d01b3b4aa08606ed7aeea31ea7f 385 PRINTS PR00625 DnaJ domain signature 24 39 7.7E-22 T 13-10-2018 IPR001623 DnaJ domain RPIT_04970 4db42d01b3b4aa08606ed7aeea31ea7f 385 PRINTS PR00625 DnaJ domain signature 6 24 7.7E-22 T 13-10-2018 IPR001623 DnaJ domain RPIT_04970 4db42d01b3b4aa08606ed7aeea31ea7f 385 SUPERFAMILY SSF57938 129 209 3.14E-17 T 13-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily RPIT_04970 4db42d01b3b4aa08606ed7aeea31ea7f 385 Pfam PF00684 DnaJ central domain 142 206 3.5E-12 T 13-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RPIT_04970 4db42d01b3b4aa08606ed7aeea31ea7f 385 Gene3D G3DSA:2.60.260.20 253 371 5.8E-26 T 13-10-2018 RPIT_04970 4db42d01b3b4aa08606ed7aeea31ea7f 385 Pfam PF00226 DnaJ domain 4 65 8.0E-24 T 13-10-2018 IPR001623 DnaJ domain RPIT_04970 4db42d01b3b4aa08606ed7aeea31ea7f 385 Gene3D G3DSA:1.10.287.110 1 109 1.4E-30 T 13-10-2018 IPR036869 Chaperone J-domain superfamily RPIT_04970 4db42d01b3b4aa08606ed7aeea31ea7f 385 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 383 36.44 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RPIT_05290 13a8b39e55819145d36153043b5f4539 370 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 244 260 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RPIT_05290 13a8b39e55819145d36153043b5f4539 370 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 4 363 9.5E-148 T 13-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 RPIT_05290 13a8b39e55819145d36153043b5f4539 370 SMART SM00937 84 194 1.9E-43 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 RPIT_05290 13a8b39e55819145d36153043b5f4539 370 Gene3D G3DSA:3.30.70.1660 129 357 1.5E-86 T 13-10-2018 RPIT_05290 13a8b39e55819145d36153043b5f4539 370 Gene3D G3DSA:3.30.160.20 225 319 1.5E-86 T 13-10-2018 RPIT_05290 13a8b39e55819145d36153043b5f4539 370 Pfam PF00472 RF-1 domain 229 336 2.5E-36 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RPIT_05290 13a8b39e55819145d36153043b5f4539 370 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 364 36.513 T 13-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 RPIT_05290 13a8b39e55819145d36153043b5f4539 370 Gene3D G3DSA:1.20.58.410 2 115 1.8E-25 T 13-10-2018 RPIT_05290 13a8b39e55819145d36153043b5f4539 370 SUPERFAMILY SSF75620 29 365 1.22E-119 T 13-10-2018 RPIT_05290 13a8b39e55819145d36153043b5f4539 370 Pfam PF03462 PCRF domain 30 219 8.8E-55 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 RPIT_04000 1d720ddc667eac22fc17be3f5d0f5669 585 Pfam PF00905 Penicillin binding protein transpeptidase domain 261 561 4.4E-68 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RPIT_04000 1d720ddc667eac22fc17be3f5d0f5669 585 Gene3D G3DSA:3.40.710.10 295 487 1.4E-91 T 13-10-2018 RPIT_04000 1d720ddc667eac22fc17be3f5d0f5669 585 SUPERFAMILY SSF56601 186 573 6.73E-81 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like RPIT_04000 1d720ddc667eac22fc17be3f5d0f5669 585 Pfam PF03717 Penicillin-binding Protein dimerisation domain 40 215 6.4E-15 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RPIT_04000 1d720ddc667eac22fc17be3f5d0f5669 585 Gene3D G3DSA:3.90.1310.30 34 233 1.0E-33 T 13-10-2018 RPIT_04000 1d720ddc667eac22fc17be3f5d0f5669 585 Gene3D G3DSA:3.30.450.330 235 563 1.4E-91 T 13-10-2018 RPIT_04000 1d720ddc667eac22fc17be3f5d0f5669 585 SUPERFAMILY SSF56519 37 233 5.49E-31 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 RPIT_06535 acc7a48dadce77808c57849525b3e4ac 684 Pfam PF00326 Prolyl oligopeptidase family 479 682 1.1E-44 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RPIT_06535 acc7a48dadce77808c57849525b3e4ac 684 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 13 402 2.1E-24 T 13-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 RPIT_06535 acc7a48dadce77808c57849525b3e4ac 684 SUPERFAMILY SSF53474 425 678 9.93E-47 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_06535 acc7a48dadce77808c57849525b3e4ac 684 SUPERFAMILY SSF50993 13 422 1.18E-43 T 13-10-2018 RPIT_06535 acc7a48dadce77808c57849525b3e4ac 684 Gene3D G3DSA:3.40.50.1820 13 640 3.3E-128 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_06535 acc7a48dadce77808c57849525b3e4ac 684 Gene3D G3DSA:2.130.10.120 62 417 3.3E-128 T 13-10-2018 RPIT_06535 acc7a48dadce77808c57849525b3e4ac 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 614 636 1.4E-41 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RPIT_06535 acc7a48dadce77808c57849525b3e4ac 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 595 610 1.4E-41 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RPIT_06535 acc7a48dadce77808c57849525b3e4ac 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 482 506 1.4E-41 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RPIT_06535 acc7a48dadce77808c57849525b3e4ac 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 455 473 1.4E-41 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RPIT_06535 acc7a48dadce77808c57849525b3e4ac 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 510 529 1.4E-41 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RPIT_06535 acc7a48dadce77808c57849525b3e4ac 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 540 560 1.4E-41 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 RPIT_12125 aca90d73593f061d42c6474b288ebddf 126 SUPERFAMILY SSF54593 6 123 1.21E-20 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_12125 aca90d73593f061d42c6474b288ebddf 126 Gene3D G3DSA:3.10.180.10 1 124 3.6E-27 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_12125 aca90d73593f061d42c6474b288ebddf 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 120 4.8E-12 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIT_11455 4f2b6e9f3524e6eed8312f09b4cef271 472 Gene3D G3DSA:1.20.1260.100 306 464 1.3E-30 T 13-10-2018 IPR038330 TspO/MBR-related superfamily RPIT_11455 4f2b6e9f3524e6eed8312f09b4cef271 472 Gene3D G3DSA:3.40.50.720 6 300 7.2E-44 T 13-10-2018 RPIT_11455 4f2b6e9f3524e6eed8312f09b4cef271 472 Pfam PF03073 TspO/MBR family 318 459 2.7E-29 T 13-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 RPIT_11455 4f2b6e9f3524e6eed8312f09b4cef271 472 SUPERFAMILY SSF51735 1 257 5.13E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_11455 4f2b6e9f3524e6eed8312f09b4cef271 472 Pfam PF13460 NAD(P)H-binding 10 116 4.5E-17 T 13-10-2018 IPR016040 NAD(P)-binding domain RPIT_00750 4653d3a17cbf8947c00778ce1a0c2e9d 389 Pfam PF07687 Peptidase dimerisation domain 183 276 1.7E-7 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain RPIT_00750 4653d3a17cbf8947c00778ce1a0c2e9d 389 Gene3D G3DSA:3.40.630.10 4 371 7.8E-118 T 13-10-2018 RPIT_00750 4653d3a17cbf8947c00778ce1a0c2e9d 389 SUPERFAMILY SSF55031 180 293 2.49E-27 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain RPIT_00750 4653d3a17cbf8947c00778ce1a0c2e9d 389 Gene3D G3DSA:3.30.70.360 178 292 7.8E-118 T 13-10-2018 RPIT_00750 4653d3a17cbf8947c00778ce1a0c2e9d 389 PIRSF PIRSF005962 2 389 1.1E-98 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 RPIT_00750 4653d3a17cbf8947c00778ce1a0c2e9d 389 Pfam PF01546 Peptidase family M20/M25/M40 66 384 4.8E-28 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 RPIT_00750 4653d3a17cbf8947c00778ce1a0c2e9d 389 SUPERFAMILY SSF53187 3 387 8.38E-70 T 13-10-2018 RPIT_00750 4653d3a17cbf8947c00778ce1a0c2e9d 389 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 4 369 6.0E-82 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 RPIT_03560 9eb1c422d1c97aef5256cc188ad85e55 232 ProDom PD037701 MEMBRANE INTEGRAL TRANSMEMBRANE RV2219/MT2276 NARROWLY PROBABLE PRECURSOR SIGNAL MLCB22.21 13 227 4.0E-51 T 13-10-2018 RPIT_03560 9eb1c422d1c97aef5256cc188ad85e55 232 Pfam PF13829 Domain of unknown function (DUF4191) 12 223 9.6E-73 T 13-10-2018 IPR025445 Protein of unknown function DUF4191 RPIT_11185 9baf8021952aa1bc29ce480fa59ec281 236 SUPERFAMILY SSF110395 3 225 1.44E-44 T 13-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 RPIT_11185 9baf8021952aa1bc29ce480fa59ec281 236 Gene3D G3DSA:3.20.20.380 3 233 3.6E-50 T 13-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 RPIT_11185 9baf8021952aa1bc29ce480fa59ec281 236 Pfam PF03932 CutC family 4 198 3.1E-28 T 13-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 RPIT_04450 b24ffe4c919df67b5c1b6f20e5fb2bad 391 SUPERFAMILY SSF117892 53 187 8.37E-40 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily RPIT_04450 b24ffe4c919df67b5c1b6f20e5fb2bad 391 Pfam PF01145 SPFH domain / Band 7 family 26 196 3.3E-36 T 13-10-2018 IPR001107 Band 7 domain RPIT_04450 b24ffe4c919df67b5c1b6f20e5fb2bad 391 SMART SM00244 22 180 6.1E-54 T 13-10-2018 IPR001107 Band 7 domain RPIT_04450 b24ffe4c919df67b5c1b6f20e5fb2bad 391 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 13-10-2018 IPR018080 Band 7/stomatin-like, conserved site RPIT_04450 b24ffe4c919df67b5c1b6f20e5fb2bad 391 PRINTS PR00721 Stomatin signature 112 129 3.6E-35 T 13-10-2018 IPR001972 Stomatin family GO:0016020 RPIT_04450 b24ffe4c919df67b5c1b6f20e5fb2bad 391 PRINTS PR00721 Stomatin signature 77 98 3.6E-35 T 13-10-2018 IPR001972 Stomatin family GO:0016020 RPIT_04450 b24ffe4c919df67b5c1b6f20e5fb2bad 391 PRINTS PR00721 Stomatin signature 132 155 3.6E-35 T 13-10-2018 IPR001972 Stomatin family GO:0016020 RPIT_04450 b24ffe4c919df67b5c1b6f20e5fb2bad 391 PRINTS PR00721 Stomatin signature 29 51 3.6E-35 T 13-10-2018 IPR001972 Stomatin family GO:0016020 RPIT_04450 b24ffe4c919df67b5c1b6f20e5fb2bad 391 PRINTS PR00721 Stomatin signature 156 174 3.6E-35 T 13-10-2018 IPR001972 Stomatin family GO:0016020 RPIT_04450 b24ffe4c919df67b5c1b6f20e5fb2bad 391 PRINTS PR00721 Stomatin signature 175 196 3.6E-35 T 13-10-2018 IPR001972 Stomatin family GO:0016020 RPIT_04450 b24ffe4c919df67b5c1b6f20e5fb2bad 391 Gene3D G3DSA:3.30.479.30 50 182 3.3E-44 T 13-10-2018 RPIT_08550 2e03b4bf931051d151817d3431330ec9 103 Pfam PF10611 Protein of unknown function (DUF2469) 1 100 6.5E-50 T 13-10-2018 IPR019592 Protein of unknown function DUF2469 RPIT_11120 ecf4661da29af4957b6930827e64f35a 378 SUPERFAMILY SSF51556 48 343 1.85E-77 T 13-10-2018 IPR032466 Metal-dependent hydrolase RPIT_11120 ecf4661da29af4957b6930827e64f35a 378 Pfam PF01979 Amidohydrolase family 45 373 4.8E-12 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 RPIT_11120 ecf4661da29af4957b6930827e64f35a 378 Gene3D G3DSA:2.30.40.10 10 371 2.3E-99 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 RPIT_11120 ecf4661da29af4957b6930827e64f35a 378 Gene3D G3DSA:3.20.20.140 49 340 2.3E-99 T 13-10-2018 RPIT_11120 ecf4661da29af4957b6930827e64f35a 378 PIRSF PIRSF038994 6 377 6.2E-91 T 13-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 RPIT_11120 ecf4661da29af4957b6930827e64f35a 378 SUPERFAMILY SSF51338 9 375 4.61E-9 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 RPIT_07120 e5a48c9db54adbe4c03aefbc25cde135 833 SMART SM00843 757 821 4.6E-28 T 13-10-2018 IPR018541 FtsK gamma domain RPIT_07120 e5a48c9db54adbe4c03aefbc25cde135 833 SUPERFAMILY SSF46785 758 823 1.24E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_07120 e5a48c9db54adbe4c03aefbc25cde135 833 Pfam PF09397 Ftsk gamma domain 761 818 3.4E-21 T 13-10-2018 IPR018541 FtsK gamma domain RPIT_07120 e5a48c9db54adbe4c03aefbc25cde135 833 SUPERFAMILY SSF52540 431 729 1.02E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_07120 e5a48c9db54adbe4c03aefbc25cde135 833 SMART SM00382 492 690 0.0074 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_07120 e5a48c9db54adbe4c03aefbc25cde135 833 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 123 249 4.1E-8 T 13-10-2018 IPR025199 DNA translocase FtsK, 4TM region RPIT_07120 e5a48c9db54adbe4c03aefbc25cde135 833 Gene3D G3DSA:3.40.50.300 454 743 1.5E-103 T 13-10-2018 RPIT_07120 e5a48c9db54adbe4c03aefbc25cde135 833 Pfam PF01580 FtsK/SpoIIIE family 603 656 1.1E-14 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RPIT_07120 e5a48c9db54adbe4c03aefbc25cde135 833 Pfam PF01580 FtsK/SpoIIIE family 457 591 2.4E-42 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RPIT_07120 e5a48c9db54adbe4c03aefbc25cde135 833 Gene3D G3DSA:3.30.980.40 351 453 1.2E-27 T 13-10-2018 RPIT_07120 e5a48c9db54adbe4c03aefbc25cde135 833 Gene3D G3DSA:1.10.10.10 761 822 1.3E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_00855 193eb90801e9b5cf81b7cd6034b4c506 163 Pfam PF04306 Protein of unknown function (DUF456) 23 158 5.8E-26 T 13-10-2018 IPR007403 Protein of unknown function DUF456 RPIT_02620 fb82f35234358b88c33d073cc588ba58 407 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 142 404 4.1E-72 T 13-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 RPIT_02620 fb82f35234358b88c33d073cc588ba58 407 SUPERFAMILY SSF56322 39 405 8.24E-84 T 13-10-2018 IPR005801 ADC synthase GO:0009058 RPIT_02620 fb82f35234358b88c33d073cc588ba58 407 Pfam PF00425 chorismate binding enzyme 146 396 4.7E-67 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal RPIT_02620 fb82f35234358b88c33d073cc588ba58 407 Gene3D G3DSA:3.60.120.10 20 407 1.1E-94 T 13-10-2018 IPR005801 ADC synthase GO:0009058 RPIT_11735 9d952505283809136b32f2a45d6b19ff 306 Gene3D G3DSA:3.40.190.10 53 305 2.1E-72 T 13-10-2018 RPIT_11735 9d952505283809136b32f2a45d6b19ff 306 Gene3D G3DSA:3.40.190.120 141 246 2.1E-72 T 13-10-2018 RPIT_11735 9d952505283809136b32f2a45d6b19ff 306 SUPERFAMILY SSF53850 41 304 2.17E-47 T 13-10-2018 RPIT_11735 9d952505283809136b32f2a45d6b19ff 306 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 42 300 5.5E-49 T 13-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 RPIT_14105 e02fef3d9dab0e8ff9a7b380a8ec4864 221 SUPERFAMILY SSF52172 3 119 1.71E-37 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_14105 e02fef3d9dab0e8ff9a7b380a8ec4864 221 SMART SM00862 149 220 1.4E-26 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_14105 e02fef3d9dab0e8ff9a7b380a8ec4864 221 Gene3D G3DSA:1.10.10.10 124 221 5.2E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_14105 e02fef3d9dab0e8ff9a7b380a8ec4864 221 Gene3D G3DSA:3.40.50.2300 1 123 1.7E-37 T 13-10-2018 RPIT_14105 e02fef3d9dab0e8ff9a7b380a8ec4864 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 220 6.0E-24 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_14105 e02fef3d9dab0e8ff9a7b380a8ec4864 221 Pfam PF00072 Response regulator receiver domain 4 114 1.3E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_14105 e02fef3d9dab0e8ff9a7b380a8ec4864 221 SMART SM00448 2 113 1.0E-41 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_14105 e02fef3d9dab0e8ff9a7b380a8ec4864 221 SUPERFAMILY SSF46894 126 220 2.83E-28 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIT_01120 f357b50465f1516d29b98e08182f78b8 525 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 350 360 - T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 RPIT_01120 f357b50465f1516d29b98e08182f78b8 525 Gene3D G3DSA:3.30.9.10 83 314 1.0E-75 T 13-10-2018 RPIT_01120 f357b50465f1516d29b98e08182f78b8 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 47 1.5E-18 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 RPIT_01120 f357b50465f1516d29b98e08182f78b8 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 6 18 1.5E-18 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 RPIT_01120 f357b50465f1516d29b98e08182f78b8 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 307 313 1.5E-18 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 RPIT_01120 f357b50465f1516d29b98e08182f78b8 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 29 1.5E-18 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 RPIT_01120 f357b50465f1516d29b98e08182f78b8 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 345 357 1.5E-18 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 RPIT_01120 f357b50465f1516d29b98e08182f78b8 525 Pfam PF01266 FAD dependent oxidoreductase 7 365 1.1E-45 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIT_01120 f357b50465f1516d29b98e08182f78b8 525 Gene3D G3DSA:3.50.50.60 7 364 1.0E-75 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_01120 f357b50465f1516d29b98e08182f78b8 525 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 7 518 1.5E-200 T 13-10-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIT_01120 f357b50465f1516d29b98e08182f78b8 525 Gene3D G3DSA:1.10.10.1100 398 472 1.3E-14 T 13-10-2018 RPIT_01120 f357b50465f1516d29b98e08182f78b8 525 SUPERFAMILY SSF54373 224 314 5.36E-10 T 13-10-2018 RPIT_01120 f357b50465f1516d29b98e08182f78b8 525 SUPERFAMILY SSF51905 6 374 7.54E-39 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_01120 f357b50465f1516d29b98e08182f78b8 525 Pfam PF04324 BFD-like [2Fe-2S] binding domain 411 459 2.9E-5 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain RPIT_04495 8b78349a90e8c90f3e3ed7f09603cf37 316 Pfam PF00318 Ribosomal protein S2 9 225 1.0E-94 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_04495 8b78349a90e8c90f3e3ed7f09603cf37 316 Gene3D G3DSA:1.10.287.610 97 153 6.6E-86 T 13-10-2018 RPIT_04495 8b78349a90e8c90f3e3ed7f09603cf37 316 PRINTS PR00395 Ribosomal protein S2 signature 176 187 4.4E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_04495 8b78349a90e8c90f3e3ed7f09603cf37 316 PRINTS PR00395 Ribosomal protein S2 signature 6 24 4.4E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_04495 8b78349a90e8c90f3e3ed7f09603cf37 316 PRINTS PR00395 Ribosomal protein S2 signature 197 211 4.4E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_04495 8b78349a90e8c90f3e3ed7f09603cf37 316 PRINTS PR00395 Ribosomal protein S2 signature 159 176 4.4E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_04495 8b78349a90e8c90f3e3ed7f09603cf37 316 PRINTS PR00395 Ribosomal protein S2 signature 37 46 4.4E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_04495 8b78349a90e8c90f3e3ed7f09603cf37 316 PRINTS PR00395 Ribosomal protein S2 signature 87 104 4.4E-37 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_04495 8b78349a90e8c90f3e3ed7f09603cf37 316 SUPERFAMILY SSF52313 7 228 4.32E-89 T 13-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily RPIT_04495 8b78349a90e8c90f3e3ed7f09603cf37 316 Gene3D G3DSA:3.40.50.10490 10 215 6.6E-86 T 13-10-2018 RPIT_04495 8b78349a90e8c90f3e3ed7f09603cf37 316 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 4.7E-104 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_04495 8b78349a90e8c90f3e3ed7f09603cf37 316 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 233 41.517 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08185 f0fc90b9d7979c93892b35b75e9ca30c 416 SUPERFAMILY SSF55174 325 412 4.84E-14 T 13-10-2018 RPIT_08185 f0fc90b9d7979c93892b35b75e9ca30c 416 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 410 3.7E-104 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RPIT_08185 f0fc90b9d7979c93892b35b75e9ca30c 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 3.2E-24 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RPIT_08185 f0fc90b9d7979c93892b35b75e9ca30c 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 214 226 3.2E-24 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RPIT_08185 f0fc90b9d7979c93892b35b75e9ca30c 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 3.2E-24 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RPIT_08185 f0fc90b9d7979c93892b35b75e9ca30c 416 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 3.2E-24 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RPIT_08185 f0fc90b9d7979c93892b35b75e9ca30c 416 Pfam PF01479 S4 domain 356 394 4.0E-5 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_08185 f0fc90b9d7979c93892b35b75e9ca30c 416 SUPERFAMILY SSF52374 4 321 2.11E-90 T 13-10-2018 RPIT_08185 f0fc90b9d7979c93892b35b75e9ca30c 416 Gene3D G3DSA:3.40.50.620 1 220 2.4E-78 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_08185 f0fc90b9d7979c93892b35b75e9ca30c 416 Gene3D G3DSA:1.10.240.10 221 323 1.5E-30 T 13-10-2018 RPIT_08185 f0fc90b9d7979c93892b35b75e9ca30c 416 Pfam PF00579 tRNA synthetases class I (W and Y) 31 321 7.2E-73 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_08185 f0fc90b9d7979c93892b35b75e9ca30c 416 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 2 416 41.756 T 13-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 RPIT_08185 f0fc90b9d7979c93892b35b75e9ca30c 416 Gene3D G3DSA:3.10.290.10 324 415 2.6E-23 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 RPIT_04910 d4f528a6f27fea362b48e826ee05c8dd 124 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 78 1.5E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_04910 d4f528a6f27fea362b48e826ee05c8dd 124 SMART SM00345 19 78 1.7E-14 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_04910 d4f528a6f27fea362b48e826ee05c8dd 124 Gene3D G3DSA:1.10.10.10 12 123 3.0E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_04910 d4f528a6f27fea362b48e826ee05c8dd 124 SUPERFAMILY SSF46785 8 102 3.22E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_01630 d6d08ad5a63265d113eeafa53e12dba5 546 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 352 541 3.2E-8 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_01630 d6d08ad5a63265d113eeafa53e12dba5 546 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 254 1.3E-10 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_01630 d6d08ad5a63265d113eeafa53e12dba5 546 Gene3D G3DSA:1.10.3720.10 281 544 1.1E-44 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_01630 d6d08ad5a63265d113eeafa53e12dba5 546 Gene3D G3DSA:1.10.3720.10 5 263 1.4E-56 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_01630 d6d08ad5a63265d113eeafa53e12dba5 546 SUPERFAMILY SSF161098 282 543 2.43E-42 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_01630 d6d08ad5a63265d113eeafa53e12dba5 546 SUPERFAMILY SSF161098 5 257 3.83E-49 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_09805 f093a760574ba855af47589b5d9bd64f 279 PIRSF PIRSF036480 1 279 4.4E-97 T 13-10-2018 RPIT_09805 f093a760574ba855af47589b5d9bd64f 279 Pfam PF00551 Formyl transferase 84 260 3.3E-33 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIT_09805 f093a760574ba855af47589b5d9bd64f 279 Gene3D G3DSA:3.30.70.260 2 80 1.6E-19 T 13-10-2018 RPIT_09805 f093a760574ba855af47589b5d9bd64f 279 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 278 42.597 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 RPIT_09805 f093a760574ba855af47589b5d9bd64f 279 SUPERFAMILY SSF53328 84 279 1.57E-56 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIT_09805 f093a760574ba855af47589b5d9bd64f 279 Pfam PF01842 ACT domain 5 64 3.4E-9 T 13-10-2018 IPR002912 ACT domain RPIT_09805 f093a760574ba855af47589b5d9bd64f 279 SUPERFAMILY SSF55021 3 80 1.25E-12 T 13-10-2018 RPIT_09805 f093a760574ba855af47589b5d9bd64f 279 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 106 133 5.6E-43 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 RPIT_09805 f093a760574ba855af47589b5d9bd64f 279 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 230 252 5.6E-43 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 RPIT_09805 f093a760574ba855af47589b5d9bd64f 279 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 252 277 5.6E-43 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 RPIT_09805 f093a760574ba855af47589b5d9bd64f 279 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 5.6E-43 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 RPIT_09805 f093a760574ba855af47589b5d9bd64f 279 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 5.6E-43 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 RPIT_09805 f093a760574ba855af47589b5d9bd64f 279 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 84 106 5.6E-43 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 RPIT_09805 f093a760574ba855af47589b5d9bd64f 279 Gene3D G3DSA:3.40.50.170 83 279 9.3E-66 T 13-10-2018 RPIT_09805 f093a760574ba855af47589b5d9bd64f 279 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 7 278 4.1E-88 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 RPIT_11485 ed2e88dc2614914d76d8202164e57299 471 SUPERFAMILY SSF53067 7 242 1.09E-42 T 13-10-2018 RPIT_11485 ed2e88dc2614914d76d8202164e57299 471 Gene3D G3DSA:3.30.420.40 3 234 1.9E-66 T 13-10-2018 RPIT_11485 ed2e88dc2614914d76d8202164e57299 471 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 240 7.8E-27 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RPIT_11485 ed2e88dc2614914d76d8202164e57299 471 Gene3D G3DSA:3.30.420.40 235 471 1.3E-72 T 13-10-2018 RPIT_11485 ed2e88dc2614914d76d8202164e57299 471 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 254 441 1.1E-20 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RPIT_11485 ed2e88dc2614914d76d8202164e57299 471 SUPERFAMILY SSF53067 251 468 3.76E-24 T 13-10-2018 RPIT_07595 591a178eafb27115f5f821d03d8c4abf 944 Gene3D G3DSA:3.40.50.10810 106 353 2.3E-54 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily RPIT_07595 591a178eafb27115f5f821d03d8c4abf 944 SUPERFAMILY SSF52540 230 559 2.11E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_07595 591a178eafb27115f5f821d03d8c4abf 944 SMART SM00490 457 545 1.1E-13 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_07595 591a178eafb27115f5f821d03d8c4abf 944 Gene3D G3DSA:3.40.50.300 382 565 1.7E-36 T 13-10-2018 RPIT_07595 591a178eafb27115f5f821d03d8c4abf 944 SUPERFAMILY SSF52540 73 296 7.56E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_07595 591a178eafb27115f5f821d03d8c4abf 944 Pfam PF00271 Helicase conserved C-terminal domain 440 545 6.2E-15 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_07595 591a178eafb27115f5f821d03d8c4abf 944 Pfam PF00176 SNF2 family N-terminal domain 130 289 4.1E-10 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 RPIT_07595 591a178eafb27115f5f821d03d8c4abf 944 SMART SM00487 104 305 4.1E-14 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIT_01850 d0338bf98a260a81c5cf864d43af47cc 135 PIRSF PIRSF017349 1 135 6.6E-47 T 13-10-2018 IPR014487 Protein of unknown function DUF3151 RPIT_01850 d0338bf98a260a81c5cf864d43af47cc 135 Pfam PF11349 Protein of unknown function (DUF3151) 7 131 1.6E-51 T 13-10-2018 IPR014487 Protein of unknown function DUF3151 RPIT_12910 74ff99d12d73ed8e5793b973cdff94c6 394 SUPERFAMILY SSF52540 70 246 7.7E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_12910 74ff99d12d73ed8e5793b973cdff94c6 394 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 37 258 3.5E-64 T 13-10-2018 IPR022488 Polyphosphate kinase-2-related RPIT_12910 74ff99d12d73ed8e5793b973cdff94c6 394 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 16 273 3.1E-99 T 13-10-2018 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 KEGG: 00190+2.7.4.1 RPIT_12910 74ff99d12d73ed8e5793b973cdff94c6 394 Gene3D G3DSA:3.40.50.300 1 282 4.9E-108 T 13-10-2018 RPIT_00850 7d73fc90c507c6fa89f69c2e592676d5 286 Gene3D G3DSA:3.60.10.10 1 257 1.9E-62 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily RPIT_00850 7d73fc90c507c6fa89f69c2e592676d5 286 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 2 256 3.8E-66 T 13-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RPIT_00850 7d73fc90c507c6fa89f69c2e592676d5 286 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 254 5.1E-58 T 13-10-2018 RPIT_00850 7d73fc90c507c6fa89f69c2e592676d5 286 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 13-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 RPIT_00850 7d73fc90c507c6fa89f69c2e592676d5 286 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 248 1.6E-19 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase RPIT_00850 7d73fc90c507c6fa89f69c2e592676d5 286 SUPERFAMILY SSF56219 2 256 5.23E-64 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily RPIT_04390 6b54eefae1dc52b37d282ad0693823a5 325 SUPERFAMILY SSF103481 206 301 3.66E-11 T 13-10-2018 RPIT_04390 6b54eefae1dc52b37d282ad0693823a5 325 SUPERFAMILY SSF103481 57 159 6.93E-10 T 13-10-2018 RPIT_04390 6b54eefae1dc52b37d282ad0693823a5 325 Pfam PF00892 EamA-like transporter family 167 299 1.9E-9 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 RPIT_04390 6b54eefae1dc52b37d282ad0693823a5 325 TIGRFAM TIGR00688 rarD: protein RarD 22 274 4.1E-52 T 13-10-2018 IPR004626 RarD protein GO:0005887 RPIT_10675 52ec781c68b93f865c3d45f310ccb57e 160 Pfam PF02517 CAAX protease self-immunity 25 115 3.3E-10 T 13-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 RPIT_04675 f9a5399f9c509eebc4771e7996b0b718 496 SUPERFAMILY SSF82051 6 161 6.02E-49 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily RPIT_04675 f9a5399f9c509eebc4771e7996b0b718 496 Hamap MF_01454 GTPase Obg [obg]. 5 333 43.991 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RPIT_04675 f9a5399f9c509eebc4771e7996b0b718 496 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 6 332 8.1E-124 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RPIT_04675 f9a5399f9c509eebc4771e7996b0b718 496 Gene3D G3DSA:2.40.240.60 363 441 1.7E-18 T 13-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily RPIT_04675 f9a5399f9c509eebc4771e7996b0b718 496 Pfam PF09269 Domain of unknown function (DUF1967) 363 438 8.0E-23 T 13-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 RPIT_04675 f9a5399f9c509eebc4771e7996b0b718 496 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 363 438 2.1E-25 T 13-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 RPIT_04675 f9a5399f9c509eebc4771e7996b0b718 496 Pfam PF01018 GTP1/OBG 7 161 2.9E-53 T 13-10-2018 IPR006169 GTP1/OBG domain RPIT_04675 f9a5399f9c509eebc4771e7996b0b718 496 SUPERFAMILY SSF52540 164 333 5.33E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04675 f9a5399f9c509eebc4771e7996b0b718 496 Pfam PF01926 50S ribosome-binding GTPase 164 256 1.1E-21 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_04675 f9a5399f9c509eebc4771e7996b0b718 496 ProSitePatterns PS00905 GTP1/OBG family signature. 215 228 - T 13-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 RPIT_04675 f9a5399f9c509eebc4771e7996b0b718 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 213 228 1.4E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_04675 f9a5399f9c509eebc4771e7996b0b718 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 230 248 1.4E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_04675 f9a5399f9c509eebc4771e7996b0b718 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 165 185 1.4E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_04675 f9a5399f9c509eebc4771e7996b0b718 496 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 186 204 1.4E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_04675 f9a5399f9c509eebc4771e7996b0b718 496 SUPERFAMILY SSF102741 361 440 1.19E-18 T 13-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily RPIT_04675 f9a5399f9c509eebc4771e7996b0b718 496 Gene3D G3DSA:2.70.210.12 3 161 7.5E-51 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily RPIT_04675 f9a5399f9c509eebc4771e7996b0b718 496 Gene3D G3DSA:3.40.50.300 162 338 8.0E-48 T 13-10-2018 RPIT_10850 de3c55f35fbe38666d99662d0bc64586 488 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RPIT_10850 de3c55f35fbe38666d99662d0bc64586 488 SUPERFAMILY SSF53335 5 487 2.55E-127 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_10850 de3c55f35fbe38666d99662d0bc64586 488 Gene3D G3DSA:3.40.50.150 160 451 1.6E-76 T 13-10-2018 RPIT_10850 de3c55f35fbe38666d99662d0bc64586 488 Gene3D G3DSA:1.20.1260.30 2 159 2.9E-30 T 13-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily RPIT_10850 de3c55f35fbe38666d99662d0bc64586 488 Pfam PF12161 HsdM N-terminal domain 6 129 3.1E-18 T 13-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RPIT_10850 de3c55f35fbe38666d99662d0bc64586 488 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 266 278 3.9E-20 T 13-10-2018 RPIT_10850 de3c55f35fbe38666d99662d0bc64586 488 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 296 320 3.9E-20 T 13-10-2018 RPIT_10850 de3c55f35fbe38666d99662d0bc64586 488 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 182 196 3.9E-20 T 13-10-2018 RPIT_10850 de3c55f35fbe38666d99662d0bc64586 488 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 158 174 3.9E-20 T 13-10-2018 RPIT_10850 de3c55f35fbe38666d99662d0bc64586 488 Pfam PF02384 N-6 DNA Methylase 136 456 1.6E-66 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RPIT_14165 0c61a9a6c2c91ca7ddd44ff916b59fc5 428 Gene3D G3DSA:1.10.580.10 56 411 1.3E-137 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 RPIT_14165 0c61a9a6c2c91ca7ddd44ff916b59fc5 428 Gene3D G3DSA:1.10.230.10 267 376 1.3E-137 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain RPIT_14165 0c61a9a6c2c91ca7ddd44ff916b59fc5 428 Gene3D G3DSA:2.20.28.60 2 49 1.8E-16 T 13-10-2018 RPIT_14165 0c61a9a6c2c91ca7ddd44ff916b59fc5 428 SUPERFAMILY SSF48256 6 428 1.22E-151 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 RPIT_14165 0c61a9a6c2c91ca7ddd44ff916b59fc5 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 13 422 2.4E-168 T 13-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 RPIT_14165 0c61a9a6c2c91ca7ddd44ff916b59fc5 428 Pfam PF00285 Citrate synthase, C-terminal domain 45 411 1.3E-128 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 RPIT_14165 0c61a9a6c2c91ca7ddd44ff916b59fc5 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 13-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 RPIT_14165 0c61a9a6c2c91ca7ddd44ff916b59fc5 428 PRINTS PR00143 Citrate synthase signature 218 233 1.7E-50 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 RPIT_14165 0c61a9a6c2c91ca7ddd44ff916b59fc5 428 PRINTS PR00143 Citrate synthase signature 240 268 1.7E-50 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 RPIT_14165 0c61a9a6c2c91ca7ddd44ff916b59fc5 428 PRINTS PR00143 Citrate synthase signature 379 393 1.7E-50 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 RPIT_14165 0c61a9a6c2c91ca7ddd44ff916b59fc5 428 PRINTS PR00143 Citrate synthase signature 296 316 1.7E-50 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 RPIT_14165 0c61a9a6c2c91ca7ddd44ff916b59fc5 428 PRINTS PR00143 Citrate synthase signature 359 375 1.7E-50 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 RPIT_14165 0c61a9a6c2c91ca7ddd44ff916b59fc5 428 PRINTS PR00143 Citrate synthase signature 164 177 1.7E-50 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 RPIT_14165 0c61a9a6c2c91ca7ddd44ff916b59fc5 428 PIRSF PIRSF001369 36 428 1.0E-149 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type RPIT_10925 4b603e642246893dcb662c3c2fd75307 187 SUPERFAMILY SSF48150 7 185 1.77E-63 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RPIT_10925 4b603e642246893dcb662c3c2fd75307 187 Gene3D G3DSA:1.10.340.30 3 187 1.2E-68 T 13-10-2018 RPIT_10925 4b603e642246893dcb662c3c2fd75307 187 Pfam PF03352 Methyladenine glycosylase 10 183 7.1E-65 T 13-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 RPIT_00410 12a92f6e151e60160c75baffcbaf31ae 101 SUPERFAMILY SSF140453 12 84 4.32E-13 T 13-10-2018 IPR036689 ESAT-6-like superfamily RPIT_00410 12a92f6e151e60160c75baffcbaf31ae 101 Pfam PF06013 Proteins of 100 residues with WXG 14 82 3.9E-15 T 13-10-2018 IPR010310 Type VII secretion system ESAT-6-like RPIT_00410 12a92f6e151e60160c75baffcbaf31ae 101 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 13 83 2.9E-15 T 13-10-2018 IPR010310 Type VII secretion system ESAT-6-like RPIT_00410 12a92f6e151e60160c75baffcbaf31ae 101 Gene3D G3DSA:1.10.287.1060 9 93 1.1E-20 T 13-10-2018 RPIT_07440 63fc8174845c839e09b58c496e221cd7 2131 SMART SM00487 75 334 4.5E-14 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIT_07440 63fc8174845c839e09b58c496e221cd7 2131 SUPERFAMILY SSF57802 1418 1442 3.94E-5 T 13-10-2018 RPIT_07440 63fc8174845c839e09b58c496e221cd7 2131 Gene3D G3DSA:3.40.50.300 70 320 7.5E-33 T 13-10-2018 RPIT_07440 63fc8174845c839e09b58c496e221cd7 2131 Gene3D G3DSA:3.40.50.300 1039 1146 2.0E-15 T 13-10-2018 RPIT_07440 63fc8174845c839e09b58c496e221cd7 2131 SUPERFAMILY SSF52540 99 1138 2.35E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_07440 63fc8174845c839e09b58c496e221cd7 2131 SMART SM00490 1046 1132 4.2E-13 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_07440 63fc8174845c839e09b58c496e221cd7 2131 Pfam PF00271 Helicase conserved C-terminal domain 1063 1131 4.9E-10 T 13-10-2018 IPR001650 Helicase, C-terminal RPIT_07440 63fc8174845c839e09b58c496e221cd7 2131 SUPERFAMILY SSF52540 78 308 1.4E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_07440 63fc8174845c839e09b58c496e221cd7 2131 Pfam PF00270 DEAD/DEAH box helicase 83 267 1.9E-14 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIT_07440 63fc8174845c839e09b58c496e221cd7 2131 Pfam PF09369 Domain of unknown function (DUF1998) 1613 1697 5.4E-7 T 13-10-2018 IPR018973 DEAD/DEAH-box helicase, putative RPIT_11430 eb3a0a68ba477981cc20ac062e5adec9 818 SMART SM00861 471 644 7.1E-38 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RPIT_11430 eb3a0a68ba477981cc20ac062e5adec9 818 Gene3D G3DSA:3.40.50.920 661 793 9.0E-33 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 RPIT_11430 eb3a0a68ba477981cc20ac062e5adec9 818 Pfam PF02780 Transketolase, C-terminal domain 666 783 2.3E-25 T 13-10-2018 IPR033248 Transketolase, C-terminal domain RPIT_11430 eb3a0a68ba477981cc20ac062e5adec9 818 Pfam PF02779 Transketolase, pyrimidine binding domain 471 643 1.4E-30 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RPIT_11430 eb3a0a68ba477981cc20ac062e5adec9 818 SUPERFAMILY SSF52518 470 650 7.2E-46 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_11430 eb3a0a68ba477981cc20ac062e5adec9 818 SUPERFAMILY SSF52518 38 410 2.29E-52 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold RPIT_11430 eb3a0a68ba477981cc20ac062e5adec9 818 Gene3D G3DSA:3.40.50.970 469 660 9.1E-59 T 13-10-2018 RPIT_11430 eb3a0a68ba477981cc20ac062e5adec9 818 SUPERFAMILY SSF52922 658 791 1.23E-28 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 RPIT_11430 eb3a0a68ba477981cc20ac062e5adec9 818 Pfam PF00676 Dehydrogenase E1 component 167 403 5.1E-32 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 RPIT_06420 58ef8e1e073d0056b59d44e9801098af 1509 Pfam PF00310 Glutamine amidotransferases class-II 24 433 3.6E-173 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain RPIT_06420 58ef8e1e073d0056b59d44e9801098af 1509 SUPERFAMILY SSF56235 24 436 2.08E-145 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal RPIT_06420 58ef8e1e073d0056b59d44e9801098af 1509 Gene3D G3DSA:3.20.20.70 441 796 1.1E-132 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_06420 58ef8e1e073d0056b59d44e9801098af 1509 Gene3D G3DSA:3.60.20.10 24 440 2.3E-172 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal RPIT_06420 58ef8e1e073d0056b59d44e9801098af 1509 Gene3D G3DSA:2.160.20.60 1227 1494 1.9E-92 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 RPIT_06420 58ef8e1e073d0056b59d44e9801098af 1509 Pfam PF01645 Conserved region in glutamate synthase 812 1173 5.3E-154 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 RPIT_06420 58ef8e1e073d0056b59d44e9801098af 1509 Gene3D G3DSA:3.20.20.70 797 1226 2.5E-191 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_06420 58ef8e1e073d0056b59d44e9801098af 1509 SUPERFAMILY SSF51395 449 1210 8.14E-258 T 13-10-2018 RPIT_06420 58ef8e1e073d0056b59d44e9801098af 1509 Pfam PF04898 Glutamate synthase central domain 459 747 3.4E-109 T 13-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 RPIT_06420 58ef8e1e073d0056b59d44e9801098af 1509 Pfam PF01493 GXGXG motif 1254 1427 4.2E-71 T 13-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 RPIT_06420 58ef8e1e073d0056b59d44e9801098af 1509 SUPERFAMILY SSF69336 1223 1485 7.19E-80 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 RPIT_13630 41e7d89f59ec8e01ffb983091c51669c 854 Pfam PF12704 MacB-like periplasmic core domain 498 696 2.8E-10 T 13-10-2018 IPR025857 MacB-like periplasmic core domain RPIT_13630 41e7d89f59ec8e01ffb983091c51669c 854 Pfam PF12704 MacB-like periplasmic core domain 17 241 1.1E-13 T 13-10-2018 IPR025857 MacB-like periplasmic core domain RPIT_13630 41e7d89f59ec8e01ffb983091c51669c 854 Pfam PF02687 FtsX-like permease family 756 846 8.8E-11 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 RPIT_13630 41e7d89f59ec8e01ffb983091c51669c 854 Pfam PF02687 FtsX-like permease family 302 397 2.0E-14 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 RPIT_08565 3f750a9eaab4abf913412b4146a22eff 116 PIRSF PIRSF002191 1 116 2.4E-49 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08565 3f750a9eaab4abf913412b4146a22eff 116 SUPERFAMILY SSF50104 2 114 7.82E-46 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily RPIT_08565 3f750a9eaab4abf913412b4146a22eff 116 Gene3D G3DSA:2.30.30.790 4 115 8.5E-15 T 13-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08565 3f750a9eaab4abf913412b4146a22eff 116 ProSitePatterns PS01015 Ribosomal protein L19 signature. 87 102 - T 13-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_08565 3f750a9eaab4abf913412b4146a22eff 116 Pfam PF01245 Ribosomal protein L19 5 114 5.4E-50 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08565 3f750a9eaab4abf913412b4146a22eff 116 PRINTS PR00061 Ribosomal protein L19 signature 5 34 4.8E-41 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08565 3f750a9eaab4abf913412b4146a22eff 116 PRINTS PR00061 Ribosomal protein L19 signature 35 64 4.8E-41 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08565 3f750a9eaab4abf913412b4146a22eff 116 PRINTS PR00061 Ribosomal protein L19 signature 89 114 4.8E-41 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08565 3f750a9eaab4abf913412b4146a22eff 116 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 5 114 3.3E-47 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08565 3f750a9eaab4abf913412b4146a22eff 116 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 115 30.171 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_12635 9ff825cdc5cb312221ff8833ba6a2c26 151 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 98 3.9E-18 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain RPIT_12635 9ff825cdc5cb312221ff8833ba6a2c26 151 SUPERFAMILY SSF53927 3 124 1.46E-36 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 RPIT_12635 9ff825cdc5cb312221ff8833ba6a2c26 151 Gene3D G3DSA:3.40.140.10 2 151 2.8E-46 T 13-10-2018 RPIT_00870 37b7b6ba6b69fc822682fbcb26c83062 658 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 403 519 4.0E-11 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RPIT_00870 37b7b6ba6b69fc822682fbcb26c83062 658 SMART SM00382 275 533 7.5E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_00870 37b7b6ba6b69fc822682fbcb26c83062 658 Gene3D G3DSA:3.40.50.300 400 542 3.7E-13 T 13-10-2018 RPIT_00870 37b7b6ba6b69fc822682fbcb26c83062 658 Gene3D G3DSA:3.40.50.300 249 383 2.3E-15 T 13-10-2018 RPIT_00870 37b7b6ba6b69fc822682fbcb26c83062 658 Pfam PF13476 AAA domain 252 315 4.1E-10 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain RPIT_00870 37b7b6ba6b69fc822682fbcb26c83062 658 SUPERFAMILY SSF52540 249 540 2.54E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04125 53e58d6b98dbab886c776b42597bd2e0 197 SUPERFAMILY SSF52540 1 191 3.4E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04125 53e58d6b98dbab886c776b42597bd2e0 197 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 196 27.166 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 RPIT_04125 53e58d6b98dbab886c776b42597bd2e0 197 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 187 4.9E-53 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 RPIT_04125 53e58d6b98dbab886c776b42597bd2e0 197 Pfam PF01121 Dephospho-CoA kinase 4 179 1.1E-59 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 RPIT_04125 53e58d6b98dbab886c776b42597bd2e0 197 Gene3D G3DSA:3.40.50.300 1 197 8.3E-72 T 13-10-2018 RPIT_05730 679da32266f013e756041d8683f629db 162 SMART SM00240 83 133 2.9E-14 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RPIT_05730 679da32266f013e756041d8683f629db 162 Gene3D G3DSA:2.60.200.20 38 157 2.7E-33 T 13-10-2018 RPIT_05730 679da32266f013e756041d8683f629db 162 SUPERFAMILY SSF49879 63 153 3.63E-29 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 RPIT_05730 679da32266f013e756041d8683f629db 162 Pfam PF13240 zinc-ribbon domain 2 24 3.0E-6 T 13-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 RPIT_05730 679da32266f013e756041d8683f629db 162 Pfam PF00498 FHA domain 84 148 2.1E-20 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RPIT_05735 ad05e82676d372c0239deae14296854c 225 SUPERFAMILY SSF46955 21 91 2.84E-13 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily RPIT_05735 ad05e82676d372c0239deae14296854c 225 SMART SM00422 7 81 1.8E-12 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_05735 ad05e82676d372c0239deae14296854c 225 Pfam PF00376 MerR family regulatory protein 18 49 1.2E-9 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_05735 ad05e82676d372c0239deae14296854c 225 Gene3D G3DSA:1.10.1660.10 21 224 2.6E-17 T 13-10-2018 RPIT_06175 acc20c801ba6026a993e6e7d5046df27 351 Gene3D G3DSA:3.20.20.70 14 346 1.3E-107 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_06175 acc20c801ba6026a993e6e7d5046df27 351 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 88 107 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 RPIT_06175 acc20c801ba6026a993e6e7d5046df27 351 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 13 348 42.749 T 13-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RPIT_06175 acc20c801ba6026a993e6e7d5046df27 351 SUPERFAMILY SSF51395 26 346 5.13E-80 T 13-10-2018 RPIT_06175 acc20c801ba6026a993e6e7d5046df27 351 PIRSF PIRSF000164 28 347 1.4E-87 T 13-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 RPIT_06175 acc20c801ba6026a993e6e7d5046df27 351 Pfam PF01180 Dihydroorotate dehydrogenase 55 342 3.7E-78 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 RPIT_06175 acc20c801ba6026a993e6e7d5046df27 351 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 14 344 1.0E-97 T 13-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RPIT_09290 43f9615f1272f5d9fba24b2afff1182a 328 Pfam PF08443 RimK-like ATP-grasp domain 141 275 5.0E-9 T 13-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 RPIT_09290 43f9615f1272f5d9fba24b2afff1182a 328 Gene3D G3DSA:3.30.1490.20 108 186 2.1E-8 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 RPIT_09290 43f9615f1272f5d9fba24b2afff1182a 328 SUPERFAMILY SSF56059 115 276 3.01E-34 T 13-10-2018 RPIT_09290 43f9615f1272f5d9fba24b2afff1182a 328 Gene3D G3DSA:3.30.470.80 187 291 6.3E-20 T 13-10-2018 RPIT_12030 d301b4b09ee99766de6343cb3fed125c 347 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 135 311 3.2E-50 T 13-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 RPIT_12030 d301b4b09ee99766de6343cb3fed125c 347 Gene3D G3DSA:3.40.50.20 18 124 1.7E-82 T 13-10-2018 RPIT_12030 d301b4b09ee99766de6343cb3fed125c 347 SUPERFAMILY SSF52440 1 131 2.7E-14 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily RPIT_12030 d301b4b09ee99766de6343cb3fed125c 347 Hamap MF_00162 Glutathione synthetase [gshB]. 1 332 77.654 T 13-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 RPIT_12030 d301b4b09ee99766de6343cb3fed125c 347 Gene3D G3DSA:3.30.470.20 125 311 1.7E-82 T 13-10-2018 RPIT_12030 d301b4b09ee99766de6343cb3fed125c 347 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 129 2.2E-13 T 13-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 RPIT_12030 d301b4b09ee99766de6343cb3fed125c 347 SUPERFAMILY SSF56059 135 328 5.3E-40 T 13-10-2018 RPIT_12030 d301b4b09ee99766de6343cb3fed125c 347 Gene3D G3DSA:3.30.1490.20 148 212 1.7E-82 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 RPIT_01905 34eb636a5c36555dbf8a516b7ba697ba 408 SUPERFAMILY SSF56059 102 308 1.75E-52 T 13-10-2018 RPIT_01905 34eb636a5c36555dbf8a516b7ba697ba 408 SUPERFAMILY SSF51246 316 406 1.62E-24 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 RPIT_01905 34eb636a5c36555dbf8a516b7ba697ba 408 Gene3D G3DSA:3.30.1490.20 121 178 2.9E-14 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 RPIT_01905 34eb636a5c36555dbf8a516b7ba697ba 408 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 2 100 1.2E-28 T 13-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RPIT_01905 34eb636a5c36555dbf8a516b7ba697ba 408 SMART SM01210 318 406 4.7E-36 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RPIT_01905 34eb636a5c36555dbf8a516b7ba697ba 408 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 2 406 2.6E-138 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RPIT_01905 34eb636a5c36555dbf8a516b7ba697ba 408 SMART SM01209 101 283 7.0E-111 T 13-10-2018 RPIT_01905 34eb636a5c36555dbf8a516b7ba697ba 408 SUPERFAMILY SSF52440 2 101 1.58E-29 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily RPIT_01905 34eb636a5c36555dbf8a516b7ba697ba 408 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 406 38.84 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RPIT_01905 34eb636a5c36555dbf8a516b7ba697ba 408 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 283 7.1E-62 T 13-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RPIT_01905 34eb636a5c36555dbf8a516b7ba697ba 408 Gene3D G3DSA:3.40.50.20 1 93 5.4E-29 T 13-10-2018 RPIT_01905 34eb636a5c36555dbf8a516b7ba697ba 408 Gene3D G3DSA:3.30.470.20 179 316 2.4E-51 T 13-10-2018 RPIT_01905 34eb636a5c36555dbf8a516b7ba697ba 408 Gene3D G3DSA:3.90.600.10 318 407 3.3E-28 T 13-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RPIT_01905 34eb636a5c36555dbf8a516b7ba697ba 408 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 277 284 - T 13-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RPIT_01905 34eb636a5c36555dbf8a516b7ba697ba 408 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 319 405 1.4E-24 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RPIT_10950 2216847cf4f0665a5dfb8a6baba6571b 283 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 22 281 5.8E-67 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RPIT_10950 2216847cf4f0665a5dfb8a6baba6571b 283 SUPERFAMILY SSF53335 21 282 1.57E-62 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_10950 2216847cf4f0665a5dfb8a6baba6571b 283 SMART SM00650 37 212 1.2E-65 T 13-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 RPIT_10950 2216847cf4f0665a5dfb8a6baba6571b 283 Gene3D G3DSA:1.10.8.100 220 283 3.8E-17 T 13-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 RPIT_10950 2216847cf4f0665a5dfb8a6baba6571b 283 Gene3D G3DSA:3.40.50.150 3 216 2.1E-57 T 13-10-2018 RPIT_10950 2216847cf4f0665a5dfb8a6baba6571b 283 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 21 283 46.59 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RPIT_10950 2216847cf4f0665a5dfb8a6baba6571b 283 Pfam PF00398 Ribosomal RNA adenine dimethylase 25 280 1.0E-43 T 13-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RPIT_06145 5c8d42ee967684b7b29d76cfd2f6e89a 641 SUPERFAMILY SSF52540 170 287 2.44E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06145 5c8d42ee967684b7b29d76cfd2f6e89a 641 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 638 18.567 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RPIT_06145 5c8d42ee967684b7b29d76cfd2f6e89a 641 Gene3D G3DSA:3.40.50.300 166 312 1.2E-32 T 13-10-2018 RPIT_06145 5c8d42ee967684b7b29d76cfd2f6e89a 641 Gene3D G3DSA:1.10.8.630 1 112 1.1E-19 T 13-10-2018 RPIT_00400 b2b39b17650e6723f76a060698973f02 391 SUPERFAMILY SSF51445 29 343 2.52E-77 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_00400 b2b39b17650e6723f76a060698973f02 391 Gene3D G3DSA:3.20.20.80 3 347 3.4E-73 T 13-10-2018 RPIT_00400 b2b39b17650e6723f76a060698973f02 391 SMART SM00642 9 337 2.0E-43 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_00400 b2b39b17650e6723f76a060698973f02 391 Pfam PF00128 Alpha amylase, catalytic domain 127 298 4.9E-21 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_00400 b2b39b17650e6723f76a060698973f02 391 Pfam PF00128 Alpha amylase, catalytic domain 38 108 8.8E-19 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_14820 e6b299ee1cbf26eb5c763dd186e4aa47 581 SUPERFAMILY SSF52091 447 558 5.49E-10 T 13-10-2018 IPR036513 STAS domain superfamily RPIT_14820 e6b299ee1cbf26eb5c763dd186e4aa47 581 Pfam PF00916 Sulfate permease family 26 394 1.6E-82 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 RPIT_14820 e6b299ee1cbf26eb5c763dd186e4aa47 581 Gene3D G3DSA:3.30.750.24 439 565 5.2E-30 T 13-10-2018 IPR036513 STAS domain superfamily RPIT_14820 e6b299ee1cbf26eb5c763dd186e4aa47 581 TIGRFAM TIGR00815 sulP: sulfate permease 13 555 2.1E-119 T 13-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 RPIT_14820 e6b299ee1cbf26eb5c763dd186e4aa47 581 Pfam PF01740 STAS domain 445 555 5.1E-14 T 13-10-2018 IPR002645 STAS domain RPIT_04980 eb407900e46d5215f04c4fea9687a85a 408 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 5 403 46.055 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RPIT_04980 eb407900e46d5215f04c4fea9687a85a 408 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 9 403 6.7E-122 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RPIT_04980 eb407900e46d5215f04c4fea9687a85a 408 Gene3D G3DSA:3.20.20.105 1 408 7.7E-146 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RPIT_04980 eb407900e46d5215f04c4fea9687a85a 408 Pfam PF01702 Queuine tRNA-ribosyltransferase 158 400 1.2E-78 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RPIT_04980 eb407900e46d5215f04c4fea9687a85a 408 SUPERFAMILY SSF51713 4 403 4.71E-130 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RPIT_04980 eb407900e46d5215f04c4fea9687a85a 408 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 9 404 3.5E-126 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RPIT_10955 9856dd4bc5d5f7c6d5788072c2aad53e 286 Gene3D G3DSA:3.20.20.140 17 282 1.3E-75 T 13-10-2018 RPIT_10955 9856dd4bc5d5f7c6d5788072c2aad53e 286 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 18 279 7.9E-67 T 13-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 RPIT_10955 9856dd4bc5d5f7c6d5788072c2aad53e 286 SUPERFAMILY SSF51556 17 280 1.98E-72 T 13-10-2018 IPR032466 Metal-dependent hydrolase RPIT_10955 9856dd4bc5d5f7c6d5788072c2aad53e 286 PIRSF PIRSF005902 12 284 1.1E-68 T 13-10-2018 IPR001130 TatD family GO:0016788 RPIT_10955 9856dd4bc5d5f7c6d5788072c2aad53e 286 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 216 232 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RPIT_10955 9856dd4bc5d5f7c6d5788072c2aad53e 286 Pfam PF01026 TatD related DNase 19 279 1.2E-65 T 13-10-2018 IPR001130 TatD family GO:0016788 RPIT_02760 5982543df793057e0b66c07d56bb0d69 293 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 284 4.0E-20 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase RPIT_02760 5982543df793057e0b66c07d56bb0d69 293 Gene3D G3DSA:3.60.10.10 1 292 5.3E-63 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily RPIT_02760 5982543df793057e0b66c07d56bb0d69 293 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 291 5.2E-54 T 13-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RPIT_02760 5982543df793057e0b66c07d56bb0d69 293 SUPERFAMILY SSF56219 1 292 2.49E-57 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily RPIT_14425 c5b9217ef070effc1feff8637982693a 685 Gene3D G3DSA:3.40.50.10950 369 682 6.3E-139 T 13-10-2018 RPIT_14425 c5b9217ef070effc1feff8637982693a 685 SUPERFAMILY SSF53659 363 682 5.35E-96 T 13-10-2018 RPIT_14425 c5b9217ef070effc1feff8637982693a 685 SUPERFAMILY SSF52540 4 203 2.39E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_14425 c5b9217ef070effc1feff8637982693a 685 Gene3D G3DSA:3.40.50.300 2 195 1.0E-10 T 13-10-2018 RPIT_14425 c5b9217ef070effc1feff8637982693a 685 Gene3D G3DSA:3.40.50.10750 502 655 6.3E-139 T 13-10-2018 RPIT_14425 c5b9217ef070effc1feff8637982693a 685 Pfam PF13500 AAA domain 3 200 2.5E-18 T 13-10-2018 RPIT_14425 c5b9217ef070effc1feff8637982693a 685 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 378 679 1.6E-122 T 13-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RPIT_14425 c5b9217ef070effc1feff8637982693a 685 Pfam PF01515 Phosphate acetyl/butaryl transferase 362 679 1.8E-129 T 13-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RPIT_14425 c5b9217ef070effc1feff8637982693a 685 SUPERFAMILY SSF75138 209 318 1.26E-14 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily RPIT_14425 c5b9217ef070effc1feff8637982693a 685 PIRSF PIRSF006107 204 685 5.5E-159 T 13-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RPIT_14425 c5b9217ef070effc1feff8637982693a 685 PIRSF PIRSF006107 1 197 2.5E-8 T 13-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RPIT_14425 c5b9217ef070effc1feff8637982693a 685 Pfam PF07085 DRTGG domain 215 317 1.7E-19 T 13-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RPIT_14425 c5b9217ef070effc1feff8637982693a 685 Gene3D G3DSA:3.40.1390.20 196 339 3.9E-14 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily RPIT_03085 e3097e3118cb08e2ccbeec706c928e2a 91 ProSitePatterns PS00056 Ribosomal protein S17 signature. 64 76 - T 13-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03085 e3097e3118cb08e2ccbeec706c928e2a 91 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 13 88 24.868 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03085 e3097e3118cb08e2ccbeec706c928e2a 91 PRINTS PR00973 Ribosomal protein S17 family signature 64 74 1.5E-10 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03085 e3097e3118cb08e2ccbeec706c928e2a 91 PRINTS PR00973 Ribosomal protein S17 family signature 32 55 1.5E-10 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03085 e3097e3118cb08e2ccbeec706c928e2a 91 PRINTS PR00973 Ribosomal protein S17 family signature 74 81 1.5E-10 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03085 e3097e3118cb08e2ccbeec706c928e2a 91 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 13 84 2.2E-35 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03085 e3097e3118cb08e2ccbeec706c928e2a 91 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 13 84 1.0E-28 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03085 e3097e3118cb08e2ccbeec706c928e2a 91 Pfam PF00366 Ribosomal protein S17 18 85 4.2E-31 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03085 e3097e3118cb08e2ccbeec706c928e2a 91 Gene3D G3DSA:2.40.50.140 12 91 2.5E-33 T 13-10-2018 RPIT_03085 e3097e3118cb08e2ccbeec706c928e2a 91 SUPERFAMILY SSF50249 12 90 2.66E-30 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_00635 470af2242b944651cb1a9de34d84a666 215 Pfam PF02254 TrkA-N domain 5 120 2.4E-26 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RPIT_00635 470af2242b944651cb1a9de34d84a666 215 Gene3D G3DSA:3.30.70.1450 137 213 7.5E-13 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 RPIT_00635 470af2242b944651cb1a9de34d84a666 215 SUPERFAMILY SSF116726 130 212 3.27E-12 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 RPIT_00635 470af2242b944651cb1a9de34d84a666 215 Gene3D G3DSA:3.40.50.720 1 136 2.2E-35 T 13-10-2018 RPIT_00635 470af2242b944651cb1a9de34d84a666 215 Pfam PF02080 TrkA-C domain 149 212 2.3E-7 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RPIT_00635 470af2242b944651cb1a9de34d84a666 215 SUPERFAMILY SSF51735 3 133 1.18E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_09675 3089938acdecb5671fa1a9635512580b 491 Pfam PF00924 Mechanosensitive ion channel 150 339 1.0E-27 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RPIT_09675 3089938acdecb5671fa1a9635512580b 491 SUPERFAMILY SSF50182 188 253 6.87E-15 T 13-10-2018 IPR010920 LSM domain superfamily RPIT_09675 3089938acdecb5671fa1a9635512580b 491 Gene3D G3DSA:2.30.30.60 204 252 4.8E-6 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily RPIT_06245 a54a89ead0c96159209673a278c18eb4 124 Pfam PF06103 Bacterial protein of unknown function (DUF948) 6 92 7.9E-16 T 13-10-2018 IPR009293 Uncharacterised protein family UPF0478 RPIT_14775 2aa879c6f0ceef318ed0d6cf2c2e607e 612 Gene3D G3DSA:3.90.550.10 140 346 2.6E-63 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_14775 2aa879c6f0ceef318ed0d6cf2c2e607e 612 Pfam PF00535 Glycosyl transferase family 2 147 308 4.6E-24 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RPIT_14775 2aa879c6f0ceef318ed0d6cf2c2e607e 612 SUPERFAMILY SSF53448 146 444 1.35E-44 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_11265 fe5f1c5e75df6f916d7eaa72750d800a 481 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 477 4.8E-131 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 RPIT_11265 fe5f1c5e75df6f916d7eaa72750d800a 481 Gene3D G3DSA:1.20.120.640 317 478 7.9E-35 T 13-10-2018 RPIT_11265 fe5f1c5e75df6f916d7eaa72750d800a 481 SUPERFAMILY SSF52374 3 310 9.38E-83 T 13-10-2018 RPIT_11265 fe5f1c5e75df6f916d7eaa72750d800a 481 Gene3D G3DSA:3.40.50.620 1 309 6.3E-122 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_11265 fe5f1c5e75df6f916d7eaa72750d800a 481 SUPERFAMILY SSF47323 353 477 1.7E-30 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_11265 fe5f1c5e75df6f916d7eaa72750d800a 481 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 479 34.701 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 RPIT_11265 fe5f1c5e75df6f916d7eaa72750d800a 481 Pfam PF09190 DALR domain 357 415 1.3E-10 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RPIT_11265 fe5f1c5e75df6f916d7eaa72750d800a 481 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 8.1E-24 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIT_11265 fe5f1c5e75df6f916d7eaa72750d800a 481 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 227 248 8.1E-24 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIT_11265 fe5f1c5e75df6f916d7eaa72750d800a 481 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 8.1E-24 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIT_11265 fe5f1c5e75df6f916d7eaa72750d800a 481 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 196 214 8.1E-24 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIT_11265 fe5f1c5e75df6f916d7eaa72750d800a 481 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 309 1.1E-111 T 13-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 RPIT_11265 fe5f1c5e75df6f916d7eaa72750d800a 481 SMART SM00840 357 419 5.3E-12 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RPIT_13195 a2284dd1da9f569c2c8bf9ffd7f54151 489 SUPERFAMILY SSF51905 1 488 6.66E-67 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_13195 a2284dd1da9f569c2c8bf9ffd7f54151 489 PRINTS PR00419 Adrenodoxin reductase family signature 4 26 6.9E-5 T 13-10-2018 RPIT_13195 a2284dd1da9f569c2c8bf9ffd7f54151 489 PRINTS PR00419 Adrenodoxin reductase family signature 27 40 6.9E-5 T 13-10-2018 RPIT_13195 a2284dd1da9f569c2c8bf9ffd7f54151 489 Gene3D G3DSA:3.50.50.60 176 329 4.5E-18 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_13195 a2284dd1da9f569c2c8bf9ffd7f54151 489 Gene3D G3DSA:3.50.50.60 2 105 2.6E-22 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_13195 a2284dd1da9f569c2c8bf9ffd7f54151 489 Pfam PF01593 Flavin containing amine oxidoreductase 12 486 4.5E-42 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 RPIT_13195 a2284dd1da9f569c2c8bf9ffd7f54151 489 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 5 487 6.8E-148 T 13-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 RPIT_08075 1f14d17617131888935f6bfd7e3645b8 206 Pfam PF00293 NUDIX domain 46 164 4.8E-11 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 RPIT_08075 1f14d17617131888935f6bfd7e3645b8 206 Gene3D G3DSA:3.90.79.10 6 206 2.2E-44 T 13-10-2018 RPIT_08075 1f14d17617131888935f6bfd7e3645b8 206 SUPERFAMILY SSF55811 9 184 1.02E-32 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 RPIT_11910 a610af26279bc2cb8e851e0b42322b4d 305 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 6 39 4.2E-6 T 13-10-2018 IPR025159 Transcriptional regulator, AbiEi antitoxin RPIT_14690 fdf7c0fef5bb9b5888a3ef7f289ff8f7 410 Gene3D G3DSA:3.20.20.80 61 368 7.6E-58 T 13-10-2018 RPIT_14690 fdf7c0fef5bb9b5888a3ef7f289ff8f7 410 Pfam PF00331 Glycosyl hydrolase family 10 93 363 1.6E-31 T 13-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 RPIT_14690 fdf7c0fef5bb9b5888a3ef7f289ff8f7 410 SMART SM00633 93 367 6.8E-9 T 13-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 RPIT_14690 fdf7c0fef5bb9b5888a3ef7f289ff8f7 410 SUPERFAMILY SSF51445 33 374 7.3E-70 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_14690 fdf7c0fef5bb9b5888a3ef7f289ff8f7 410 PRINTS PR00134 Glycosyl hydrolase family 10 signature 213 224 3.9E-8 T 13-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 RPIT_14690 fdf7c0fef5bb9b5888a3ef7f289ff8f7 410 PRINTS PR00134 Glycosyl hydrolase family 10 signature 164 175 3.9E-8 T 13-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 RPIT_14690 fdf7c0fef5bb9b5888a3ef7f289ff8f7 410 PRINTS PR00134 Glycosyl hydrolase family 10 signature 236 248 3.9E-8 T 13-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 RPIT_14690 fdf7c0fef5bb9b5888a3ef7f289ff8f7 410 PRINTS PR00134 Glycosyl hydrolase family 10 signature 122 134 3.9E-8 T 13-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 RPIT_00505 d2884867bcd8072cfeef62b1250caa39 146 Gene3D G3DSA:3.10.180.10 13 145 6.4E-31 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_00505 d2884867bcd8072cfeef62b1250caa39 146 SUPERFAMILY SSF54593 13 135 1.52E-22 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_00505 d2884867bcd8072cfeef62b1250caa39 146 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 136 1.1E-7 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIT_03045 ee86d57a37026acb8a9bfa9354d60b6f 250 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 20 205 9.7E-66 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03045 ee86d57a37026acb8a9bfa9354d60b6f 250 SUPERFAMILY SSF52166 5 207 2.62E-71 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 RPIT_03045 ee86d57a37026acb8a9bfa9354d60b6f 250 Gene3D G3DSA:3.40.1370.10 4 209 5.6E-70 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 RPIT_03045 ee86d57a37026acb8a9bfa9354d60b6f 250 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 11 211 32.12 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03045 ee86d57a37026acb8a9bfa9354d60b6f 250 Pfam PF00573 Ribosomal protein L4/L1 family 20 206 3.5E-59 T 13-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 RPIT_13090 5a1a1d74b518eb73d5260c454671c909 339 PRINTS PR00992 Alanine racemase signature 59 77 1.6E-6 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_13090 5a1a1d74b518eb73d5260c454671c909 339 PRINTS PR00992 Alanine racemase signature 119 131 1.6E-6 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_13090 5a1a1d74b518eb73d5260c454671c909 339 PRINTS PR00992 Alanine racemase signature 23 39 1.6E-6 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_13090 5a1a1d74b518eb73d5260c454671c909 339 SUPERFAMILY SSF51419 15 205 1.6E-18 T 13-10-2018 IPR029066 PLP-binding barrel RPIT_13090 5a1a1d74b518eb73d5260c454671c909 339 Gene3D G3DSA:3.20.20.10 24 204 8.7E-20 T 13-10-2018 IPR029066 PLP-binding barrel RPIT_13090 5a1a1d74b518eb73d5260c454671c909 339 Gene3D G3DSA:2.40.37.10 211 259 8.7E-20 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RPIT_13090 5a1a1d74b518eb73d5260c454671c909 339 Pfam PF01168 Alanine racemase, N-terminal domain 8 152 5.2E-18 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RPIT_04755 f985c96ffb694163f45290f6831bf871 467 Pfam PF03441 FAD binding domain of DNA photolyase 261 450 2.0E-75 T 13-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 RPIT_04755 f985c96ffb694163f45290f6831bf871 467 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 328 347 - T 13-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal RPIT_04755 f985c96ffb694163f45290f6831bf871 467 PRINTS PR00147 DNA photolyase signature 328 346 1.8E-24 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 RPIT_04755 f985c96ffb694163f45290f6831bf871 467 PRINTS PR00147 DNA photolyase signature 367 381 1.8E-24 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 RPIT_04755 f985c96ffb694163f45290f6831bf871 467 PRINTS PR00147 DNA photolyase signature 136 152 1.8E-24 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 RPIT_04755 f985c96ffb694163f45290f6831bf871 467 PRINTS PR00147 DNA photolyase signature 308 324 1.8E-24 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 RPIT_04755 f985c96ffb694163f45290f6831bf871 467 Pfam PF00875 DNA photolyase 6 162 4.5E-38 T 13-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 RPIT_04755 f985c96ffb694163f45290f6831bf871 467 Gene3D G3DSA:1.25.40.80 125 273 1.9E-64 T 13-10-2018 RPIT_04755 f985c96ffb694163f45290f6831bf871 467 SUPERFAMILY SSF48173 189 454 1.13E-97 T 13-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 RPIT_04755 f985c96ffb694163f45290f6831bf871 467 SUPERFAMILY SSF52425 6 167 4.19E-40 T 13-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 RPIT_04755 f985c96ffb694163f45290f6831bf871 467 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 308 320 - T 13-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal RPIT_04755 f985c96ffb694163f45290f6831bf871 467 Gene3D G3DSA:1.10.579.10 279 456 8.4E-70 T 13-10-2018 RPIT_04755 f985c96ffb694163f45290f6831bf871 467 Gene3D G3DSA:3.40.50.620 6 195 1.9E-64 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_01085 e3cd5c231f071106a3af9387d87a4a13 432 SUPERFAMILY SSF51126 144 398 4.91E-25 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor RPIT_01085 e3cd5c231f071106a3af9387d87a4a13 432 Gene3D G3DSA:2.160.20.10 149 426 2.0E-20 T 13-10-2018 IPR012334 Pectin lyase fold RPIT_01085 e3cd5c231f071106a3af9387d87a4a13 432 Pfam PF13229 Right handed beta helix region 203 362 1.5E-10 T 13-10-2018 IPR039448 Right handed beta helix domain RPIT_08750 d974de7545b50ecb2cd2f7a0a7388fff 253 Gene3D G3DSA:3.40.50.1820 2 251 3.6E-44 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_08750 d974de7545b50ecb2cd2f7a0a7388fff 253 Pfam PF12697 Alpha/beta hydrolase family 17 242 6.8E-19 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_08750 d974de7545b50ecb2cd2f7a0a7388fff 253 SUPERFAMILY SSF53474 3 251 9.13E-43 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_08750 d974de7545b50ecb2cd2f7a0a7388fff 253 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 1.5E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_08750 d974de7545b50ecb2cd2f7a0a7388fff 253 PRINTS PR00111 Alpha/beta hydrolase fold signature 86 99 1.5E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_08750 d974de7545b50ecb2cd2f7a0a7388fff 253 PRINTS PR00111 Alpha/beta hydrolase fold signature 40 55 1.5E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_08910 42b102f540b917217380740c25ef5dd7 273 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 93 8.9E-8 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RPIT_08910 42b102f540b917217380740c25ef5dd7 273 SUPERFAMILY SSF46946 120 208 1.91E-22 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RPIT_08910 42b102f540b917217380740c25ef5dd7 273 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 120 204 9.4E-18 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RPIT_08910 42b102f540b917217380740c25ef5dd7 273 SMART SM00898 2 105 1.0E-12 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RPIT_08910 42b102f540b917217380740c25ef5dd7 273 Pfam PF06827 Zinc finger found in FPG and IleRS 237 265 7.0E-9 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 RPIT_08910 42b102f540b917217380740c25ef5dd7 273 ProSitePatterns PS01242 Zinc finger FPG-type signature. 240 264 - T 13-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 RPIT_08910 42b102f540b917217380740c25ef5dd7 273 SMART SM01232 119 211 7.9E-29 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RPIT_08910 42b102f540b917217380740c25ef5dd7 273 Gene3D G3DSA:1.10.8.50 121 266 1.7E-40 T 13-10-2018 RPIT_08910 42b102f540b917217380740c25ef5dd7 273 Gene3D G3DSA:3.20.190.10 2 118 1.7E-11 T 13-10-2018 IPR035937 MutM-like, N-terminal RPIT_08910 42b102f540b917217380740c25ef5dd7 273 SUPERFAMILY SSF57716 217 265 4.12E-14 T 13-10-2018 RPIT_08910 42b102f540b917217380740c25ef5dd7 273 SUPERFAMILY SSF81624 2 120 6.28E-19 T 13-10-2018 IPR035937 MutM-like, N-terminal RPIT_09345 4d333704e8c1a682240d77524bebe265 833 Gene3D G3DSA:3.40.50.300 221 408 4.6E-22 T 13-10-2018 RPIT_09345 4d333704e8c1a682240d77524bebe265 833 SUPERFAMILY SSF52540 46 379 1.09E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_09345 4d333704e8c1a682240d77524bebe265 833 Gene3D G3DSA:3.40.50.300 7 220 1.3E-11 T 13-10-2018 RPIT_09345 4d333704e8c1a682240d77524bebe265 833 Pfam PF04851 Type III restriction enzyme, res subunit 19 209 2.2E-20 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RPIT_01125 0192233cae5fca38bcae42df9aa07e21 453 SUPERFAMILY SSF56349 94 436 6.47E-32 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIT_01125 0192233cae5fca38bcae42df9aa07e21 453 Pfam PF00589 Phage integrase family 247 430 2.9E-7 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIT_01125 0192233cae5fca38bcae42df9aa07e21 453 Gene3D G3DSA:1.10.443.10 223 444 3.7E-23 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 RPIT_01125 0192233cae5fca38bcae42df9aa07e21 453 Gene3D G3DSA:1.10.150.130 93 215 1.4E-13 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal RPIT_14110 c679efd51110ebf386846e18a764b4d5 477 Gene3D G3DSA:1.10.287.130 208 322 5.2E-29 T 13-10-2018 RPIT_14110 c679efd51110ebf386846e18a764b4d5 477 SMART SM00304 204 256 3.9E-14 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 RPIT_14110 c679efd51110ebf386846e18a764b4d5 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 472 1.6E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_14110 c679efd51110ebf386846e18a764b4d5 477 Pfam PF00672 HAMP domain 205 253 9.4E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 RPIT_14110 c679efd51110ebf386846e18a764b4d5 477 SUPERFAMILY SSF55874 310 471 6.81E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_14110 c679efd51110ebf386846e18a764b4d5 477 Pfam PF00512 His Kinase A (phospho-acceptor) domain 257 319 1.4E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIT_14110 c679efd51110ebf386846e18a764b4d5 477 SMART SM00388 257 321 2.3E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIT_14110 c679efd51110ebf386846e18a764b4d5 477 SUPERFAMILY SSF47384 240 320 2.16E-16 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 RPIT_14110 c679efd51110ebf386846e18a764b4d5 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 5.5E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_14110 c679efd51110ebf386846e18a764b4d5 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 470 5.5E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_14110 c679efd51110ebf386846e18a764b4d5 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 5.5E-14 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_14110 c679efd51110ebf386846e18a764b4d5 477 SUPERFAMILY SSF158472 205 254 3.92E-8 T 13-10-2018 RPIT_14110 c679efd51110ebf386846e18a764b4d5 477 Gene3D G3DSA:3.30.565.10 337 476 2.1E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_14110 c679efd51110ebf386846e18a764b4d5 477 SMART SM00387 362 473 5.6E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_04875 72d8a2624be5f50b37395ac2fee65913 830 SUPERFAMILY SSF51445 217 539 3.31E-49 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_04875 72d8a2624be5f50b37395ac2fee65913 830 Gene3D G3DSA:3.20.20.80 212 570 2.9E-85 T 13-10-2018 RPIT_04875 72d8a2624be5f50b37395ac2fee65913 830 Gene3D G3DSA:2.60.40.1180 572 625 2.8E-5 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta RPIT_04875 72d8a2624be5f50b37395ac2fee65913 830 Pfam PF01055 Glycosyl hydrolases family 31 208 627 1.4E-86 T 13-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 RPIT_04875 72d8a2624be5f50b37395ac2fee65913 830 SUPERFAMILY SSF51011 541 624 2.73E-10 T 13-10-2018 RPIT_04875 72d8a2624be5f50b37395ac2fee65913 830 Gene3D G3DSA:2.60.40.1180 626 722 1.8E-9 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta RPIT_13750 318c6a3a6b66c63d36c382dda692af8f 300 SUPERFAMILY SSF57845 5 33 3.2E-5 T 13-10-2018 RPIT_13750 318c6a3a6b66c63d36c382dda692af8f 300 Pfam PF00643 B-box zinc finger 4 31 2.5E-5 T 13-10-2018 IPR000315 B-box-type zinc finger GO:0005622|GO:0008270 RPIT_13750 318c6a3a6b66c63d36c382dda692af8f 300 SUPERFAMILY SSF144091 69 273 7.06E-38 T 13-10-2018 RPIT_13750 318c6a3a6b66c63d36c382dda692af8f 300 Gene3D G3DSA:1.20.1540.10 64 274 2.7E-32 T 13-10-2018 IPR035952 Rhomboid-like superfamily RPIT_13750 318c6a3a6b66c63d36c382dda692af8f 300 Pfam PF01694 Rhomboid family 134 267 2.3E-31 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RPIT_03540 cbee317976b49c766f5863152f23cb49 473 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 97 4.4E-27 T 13-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 RPIT_03540 cbee317976b49c766f5863152f23cb49 473 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 13-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 RPIT_03540 cbee317976b49c766f5863152f23cb49 473 SUPERFAMILY SSF54368 5 103 1.83E-33 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIT_03540 cbee317976b49c766f5863152f23cb49 473 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 471 3.5E-200 T 13-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIT_03540 cbee317976b49c766f5863152f23cb49 473 Gene3D G3DSA:3.10.20.70 4 106 1.1E-37 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIT_03540 cbee317976b49c766f5863152f23cb49 473 SUPERFAMILY SSF55931 105 471 1.77E-137 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 RPIT_03540 cbee317976b49c766f5863152f23cb49 473 SMART SM01230 104 383 2.0E-152 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIT_03540 cbee317976b49c766f5863152f23cb49 473 Pfam PF00120 Glutamine synthetase, catalytic domain 105 470 1.2E-135 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIT_03540 cbee317976b49c766f5863152f23cb49 473 Gene3D G3DSA:3.30.590.10 107 461 2.7E-148 T 13-10-2018 RPIT_03540 cbee317976b49c766f5863152f23cb49 473 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 13-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 RPIT_06005 d6cc4291705602776491793e09361a8e 380 SUPERFAMILY SSF53474 24 374 1.19E-92 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_06005 d6cc4291705602776491793e09361a8e 380 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 14 373 30.081 T 13-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 RPIT_06005 d6cc4291705602776491793e09361a8e 380 Gene3D G3DSA:3.40.50.1820 28 361 2.7E-137 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_06005 d6cc4291705602776491793e09361a8e 380 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 24 372 3.5E-133 T 13-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 RPIT_06005 d6cc4291705602776491793e09361a8e 380 PIRSF PIRSF000443 6 379 5.5E-131 T 13-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 RPIT_06005 d6cc4291705602776491793e09361a8e 380 Pfam PF00561 alpha/beta hydrolase fold 53 360 5.1E-29 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_06005 d6cc4291705602776491793e09361a8e 380 Gene3D G3DSA:1.10.1740.110 188 293 2.7E-137 T 13-10-2018 RPIT_11555 02c0fc3aa65574ab8891cff4276e9659 342 SUPERFAMILY SSF51569 3 337 2.64E-97 T 13-10-2018 RPIT_11555 02c0fc3aa65574ab8891cff4276e9659 342 PIRSF PIRSF001359 6 338 2.1E-66 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RPIT_11555 02c0fc3aa65574ab8891cff4276e9659 342 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 10 337 3.8E-73 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RPIT_11555 02c0fc3aa65574ab8891cff4276e9659 342 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 158 169 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RPIT_11555 02c0fc3aa65574ab8891cff4276e9659 342 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 86 97 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RPIT_11555 02c0fc3aa65574ab8891cff4276e9659 342 Gene3D G3DSA:3.20.20.70 1 342 3.1E-123 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_11555 02c0fc3aa65574ab8891cff4276e9659 342 Pfam PF01116 Fructose-bisphosphate aldolase class-II 9 337 4.9E-83 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RPIT_11555 02c0fc3aa65574ab8891cff4276e9659 342 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 3 336 1.6E-128 T 13-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 RPIT_06115 f03410d58f892d3205f8ae70cbb29bf5 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 65 187 2.4E-14 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 RPIT_06115 f03410d58f892d3205f8ae70cbb29bf5 223 SUPERFAMILY SSF56784 8 191 6.78E-44 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_06115 f03410d58f892d3205f8ae70cbb29bf5 223 Gene3D G3DSA:1.10.150.240 20 90 1.8E-46 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RPIT_06115 f03410d58f892d3205f8ae70cbb29bf5 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 188 8.6E-27 T 13-10-2018 RPIT_06115 f03410d58f892d3205f8ae70cbb29bf5 223 Gene3D G3DSA:3.40.50.1000 10 190 1.8E-46 T 13-10-2018 IPR023214 HAD superfamily RPIT_07170 849ae28f26c450927e16fbb2c5620d93 247 SUPERFAMILY SSF109854 86 223 8.77E-12 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes RPIT_07170 849ae28f26c450927e16fbb2c5620d93 247 Gene3D G3DSA:1.20.120.450 76 235 1.7E-8 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes RPIT_07170 849ae28f26c450927e16fbb2c5620d93 247 Pfam PF12867 DinB superfamily 94 232 2.9E-16 T 13-10-2018 IPR024775 DinB-like domain RPIT_03305 0cc8740285fd3ba7c7c4994c234bc756 287 SUPERFAMILY SSF51658 5 280 4.15E-53 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily RPIT_03305 0cc8740285fd3ba7c7c4994c234bc756 287 Gene3D G3DSA:3.20.20.150 3 285 3.5E-51 T 13-10-2018 RPIT_03305 0cc8740285fd3ba7c7c4994c234bc756 287 Pfam PF01261 Xylose isomerase-like TIM barrel 22 242 1.7E-35 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain RPIT_06060 22e765eaa11e23aa5d83a17b6e61b57c 487 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 7 473 44.186 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 RPIT_06060 22e765eaa11e23aa5d83a17b6e61b57c 487 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 27 456 1.7E-111 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 RPIT_03465 dff243e4035666f78e8372c7d43aa8b4 477 Pfam PF00773 RNB domain 52 369 3.9E-36 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 RPIT_03465 dff243e4035666f78e8372c7d43aa8b4 477 SMART SM00955 51 370 9.8E-42 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 RPIT_03465 dff243e4035666f78e8372c7d43aa8b4 477 SUPERFAMILY SSF50249 25 414 3.71E-83 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_14390 f4b5372693a859c959baea3cb4f17304 411 Gene3D G3DSA:1.50.10.10 10 410 2.0E-139 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 RPIT_14390 f4b5372693a859c959baea3cb4f17304 411 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 40 391 1.3E-96 T 13-10-2018 RPIT_14390 f4b5372693a859c959baea3cb4f17304 411 SUPERFAMILY SSF48208 15 397 5.05E-89 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 RPIT_09050 6ab0d5eeb486572b95b72a5ef7b9804c 180 SUPERFAMILY SSF52218 3 157 3.05E-28 T 13-10-2018 IPR029039 Flavoprotein-like superfamily RPIT_09050 6ab0d5eeb486572b95b72a5ef7b9804c 180 Pfam PF03358 NADPH-dependent FMN reductase 3 146 5.1E-23 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RPIT_09050 6ab0d5eeb486572b95b72a5ef7b9804c 180 Gene3D G3DSA:3.40.50.360 3 179 1.2E-31 T 13-10-2018 IPR029039 Flavoprotein-like superfamily RPIT_01925 afac356146767d82d5b585bfd17b3648 414 Pfam PF00108 Thiolase, N-terminal domain 7 274 7.4E-54 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 RPIT_01925 afac356146767d82d5b585bfd17b3648 414 SUPERFAMILY SSF53901 6 280 5.76E-56 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 RPIT_01925 afac356146767d82d5b585bfd17b3648 414 SUPERFAMILY SSF53901 280 413 1.52E-27 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 RPIT_01925 afac356146767d82d5b585bfd17b3648 414 Gene3D G3DSA:3.40.47.10 2 414 2.6E-102 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 RPIT_01925 afac356146767d82d5b585bfd17b3648 414 PIRSF PIRSF000429 1 414 6.9E-103 T 13-10-2018 IPR002155 Thiolase GO:0016747 RPIT_01925 afac356146767d82d5b585bfd17b3648 414 Pfam PF02803 Thiolase, C-terminal domain 300 413 7.0E-30 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 RPIT_01925 afac356146767d82d5b585bfd17b3648 414 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 413 3.0E-115 T 13-10-2018 IPR002155 Thiolase GO:0016747 RPIT_01715 a2ccb6fcb7e461db1cfc662517d7eaed 236 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 8 214 1.6E-41 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 RPIT_00140 a9547c996f811d2444048bd81b8b5005 1272 Gene3D G3DSA:2.160.20.20 789 1103 6.9E-6 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily RPIT_00140 a9547c996f811d2444048bd81b8b5005 1272 Gene3D G3DSA:2.60.40.2030 228 338 2.9E-22 T 13-10-2018 IPR038081 CalX-like domain superfamily RPIT_00140 a9547c996f811d2444048bd81b8b5005 1272 Pfam PF00722 Glycosyl hydrolases family 16 478 668 1.0E-31 T 13-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 RPIT_00140 a9547c996f811d2444048bd81b8b5005 1272 SUPERFAMILY SSF49785 89 220 3.44E-9 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_00140 a9547c996f811d2444048bd81b8b5005 1272 Gene3D G3DSA:2.60.120.200 433 686 4.8E-79 T 13-10-2018 RPIT_00140 a9547c996f811d2444048bd81b8b5005 1272 Pfam PF03160 Calx-beta domain 229 314 3.8E-15 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RPIT_00140 a9547c996f811d2444048bd81b8b5005 1272 Gene3D G3DSA:2.60.120.430 33 222 1.6E-29 T 13-10-2018 RPIT_00140 a9547c996f811d2444048bd81b8b5005 1272 Gene3D G3DSA:2.60.120.430 687 750 7.3E-6 T 13-10-2018 RPIT_00140 a9547c996f811d2444048bd81b8b5005 1272 Pfam PF03425 Carbohydrate binding domain (family 11) 35 223 7.5E-11 T 13-10-2018 IPR005087 Carbohydrate binding module family 11 GO:0008810|GO:0030245 RPIT_00140 a9547c996f811d2444048bd81b8b5005 1272 SMART SM00237 217 315 7.2E-10 T 13-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 RPIT_00140 a9547c996f811d2444048bd81b8b5005 1272 SUPERFAMILY SSF141072 231 337 1.44E-24 T 13-10-2018 IPR038081 CalX-like domain superfamily RPIT_00140 a9547c996f811d2444048bd81b8b5005 1272 SUPERFAMILY SSF51126 750 1109 2.09E-38 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor RPIT_00140 a9547c996f811d2444048bd81b8b5005 1272 SUPERFAMILY SSF49899 434 692 1.58E-69 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RPIT_01330 e6a0e771fbf8a368d1497ea7986fba9e 617 Gene3D G3DSA:3.90.228.20 240 603 5.5E-268 T 13-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 RPIT_01330 e6a0e771fbf8a368d1497ea7986fba9e 617 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 16 236 3.4E-98 T 13-10-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 RPIT_01330 e6a0e771fbf8a368d1497ea7986fba9e 617 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 240 606 3.8E-167 T 13-10-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 RPIT_01330 e6a0e771fbf8a368d1497ea7986fba9e 617 SUPERFAMILY SSF68923 9 239 7.85E-95 T 13-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 RPIT_01330 e6a0e771fbf8a368d1497ea7986fba9e 617 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 4 608 48.701 T 13-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 RPIT_01330 e6a0e771fbf8a368d1497ea7986fba9e 617 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 264 272 - T 13-10-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 RPIT_01330 e6a0e771fbf8a368d1497ea7986fba9e 617 Gene3D G3DSA:2.170.8.10 51 401 5.5E-268 T 13-10-2018 RPIT_01330 e6a0e771fbf8a368d1497ea7986fba9e 617 SUPERFAMILY SSF53795 240 607 1.79E-150 T 13-10-2018 RPIT_01330 e6a0e771fbf8a368d1497ea7986fba9e 617 PIRSF PIRSF001348 3 610 1.9E-274 T 13-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 RPIT_01330 e6a0e771fbf8a368d1497ea7986fba9e 617 Gene3D G3DSA:3.40.449.10 15 239 5.5E-268 T 13-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 RPIT_00460 1fdc4bb20a9623245944976b7c9d2c1f 236 Pfam PF01965 DJ-1/PfpI family 32 228 2.7E-16 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 RPIT_00460 1fdc4bb20a9623245944976b7c9d2c1f 236 Gene3D G3DSA:3.40.50.880 7 233 4.6E-70 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_00460 1fdc4bb20a9623245944976b7c9d2c1f 236 SUPERFAMILY SSF52317 7 232 7.97E-64 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_06665 f77219868a21ed7283ac3928b2614aac 483 SUPERFAMILY SSF47917 364 480 1.07E-46 T 13-10-2018 RPIT_06665 f77219868a21ed7283ac3928b2614aac 483 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 16 475 6.3E-230 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 RPIT_06665 f77219868a21ed7283ac3928b2614aac 483 Gene3D G3DSA:1.10.1140.10 364 483 1.2E-47 T 13-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 RPIT_06665 f77219868a21ed7283ac3928b2614aac 483 Gene3D G3DSA:2.40.10.170 13 92 1.2E-25 T 13-10-2018 RPIT_06665 f77219868a21ed7283ac3928b2614aac 483 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 352 361 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 RPIT_06665 f77219868a21ed7283ac3928b2614aac 483 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 19 90 1.8E-17 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 RPIT_06665 f77219868a21ed7283ac3928b2614aac 483 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 148 361 3.8E-64 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 RPIT_06665 f77219868a21ed7283ac3928b2614aac 483 Hamap MF_01347 ATP synthase subunit beta [atpB]. 14 479 53.212 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 RPIT_06665 f77219868a21ed7283ac3928b2614aac 483 SUPERFAMILY SSF50615 16 92 2.3E-22 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 RPIT_06665 f77219868a21ed7283ac3928b2614aac 483 Gene3D G3DSA:3.40.50.300 93 363 5.5E-101 T 13-10-2018 RPIT_06665 f77219868a21ed7283ac3928b2614aac 483 SUPERFAMILY SSF52540 94 366 7.28E-87 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06665 f77219868a21ed7283ac3928b2614aac 483 SMART SM00382 160 423 1.3E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_00910 5b35eb8d3c78f4cdc5a2fd86c58ad56f 496 Pfam PF00860 Permease family 18 179 2.5E-38 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 RPIT_00910 5b35eb8d3c78f4cdc5a2fd86c58ad56f 496 Pfam PF00860 Permease family 213 444 2.3E-62 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 RPIT_00910 5b35eb8d3c78f4cdc5a2fd86c58ad56f 496 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 16 475 1.1E-113 T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 RPIT_00910 5b35eb8d3c78f4cdc5a2fd86c58ad56f 496 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 392 412 - T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 RPIT_08695 1bb13c59f1d070ff5596df8727ac8c2d 182 Pfam PF02620 Uncharacterized ACR, COG1399 69 176 8.7E-27 T 13-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD RPIT_09380 b82f61df1c6b1e04c77ae695cc96998a 154 Pfam PF13676 TIR domain 21 111 7.5E-14 T 13-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 RPIT_09380 b82f61df1c6b1e04c77ae695cc96998a 154 SUPERFAMILY SSF52200 15 128 2.88E-18 T 13-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily RPIT_09380 b82f61df1c6b1e04c77ae695cc96998a 154 Gene3D G3DSA:3.40.50.10140 3 149 6.3E-23 T 13-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily RPIT_05300 c69db9e9a0f32aad84241d5d3f1f5b4f 283 PIRSF PIRSF003097 1 283 2.0E-70 T 13-10-2018 IPR004513 Cell division protein FtsX GO:0016021 RPIT_05300 c69db9e9a0f32aad84241d5d3f1f5b4f 283 Gene3D G3DSA:3.30.70.3040 25 144 6.4E-22 T 13-10-2018 RPIT_05300 c69db9e9a0f32aad84241d5d3f1f5b4f 283 Pfam PF02687 FtsX-like permease family 188 279 4.8E-6 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 RPIT_06435 ae0fcef3562c84a6ba9b6899f70b2a55 411 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 55 371 8.1E-48 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme RPIT_06435 ae0fcef3562c84a6ba9b6899f70b2a55 411 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 82 96 - T 13-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RPIT_06435 ae0fcef3562c84a6ba9b6899f70b2a55 411 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 3 397 49.974 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RPIT_06435 ae0fcef3562c84a6ba9b6899f70b2a55 411 Gene3D G3DSA:3.40.50.1100 11 207 1.9E-178 T 13-10-2018 RPIT_06435 ae0fcef3562c84a6ba9b6899f70b2a55 411 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 8 395 2.1E-177 T 13-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RPIT_06435 ae0fcef3562c84a6ba9b6899f70b2a55 411 Gene3D G3DSA:3.40.50.1100 55 390 1.9E-178 T 13-10-2018 RPIT_06435 ae0fcef3562c84a6ba9b6899f70b2a55 411 PIRSF PIRSF001413 2 402 2.0E-155 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RPIT_06435 ae0fcef3562c84a6ba9b6899f70b2a55 411 SUPERFAMILY SSF53686 4 396 7.46E-139 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIT_03730 4c1bf61dc6626741c14183d1ec3e4462 138 Gene3D G3DSA:3.40.50.2300 6 138 1.6E-6 T 13-10-2018 RPIT_03730 4c1bf61dc6626741c14183d1ec3e4462 138 SUPERFAMILY SSF52172 8 122 6.26E-6 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_13275 1408cc252aaa51595a57bd0f42751f24 496 SUPERFAMILY SSF53067 4 242 3.27E-48 T 13-10-2018 RPIT_13275 1408cc252aaa51595a57bd0f42751f24 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 239 2.6E-43 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RPIT_13275 1408cc252aaa51595a57bd0f42751f24 496 Gene3D G3DSA:3.30.420.40 245 488 2.3E-44 T 13-10-2018 RPIT_13275 1408cc252aaa51595a57bd0f42751f24 496 SUPERFAMILY SSF53067 246 480 6.01E-30 T 13-10-2018 RPIT_13275 1408cc252aaa51595a57bd0f42751f24 496 PIRSF PIRSF000538 2 488 1.1E-84 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RPIT_13275 1408cc252aaa51595a57bd0f42751f24 496 Gene3D G3DSA:3.30.420.40 2 243 9.8E-66 T 13-10-2018 RPIT_13275 1408cc252aaa51595a57bd0f42751f24 496 ProSitePatterns PS01228 Hypothetical cof family signature 1. 16 27 - T 13-10-2018 RPIT_13275 1408cc252aaa51595a57bd0f42751f24 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 290 423 5.2E-18 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RPIT_13865 e52b4a7e2e3b19d47703d887f86c949a 364 Gene3D G3DSA:3.40.50.2000 176 348 4.5E-39 T 13-10-2018 RPIT_13865 e52b4a7e2e3b19d47703d887f86c949a 364 SUPERFAMILY SSF53756 16 361 1.35E-63 T 13-10-2018 RPIT_13865 e52b4a7e2e3b19d47703d887f86c949a 364 Gene3D G3DSA:3.40.50.2000 13 175 3.8E-8 T 13-10-2018 RPIT_13865 e52b4a7e2e3b19d47703d887f86c949a 364 Pfam PF13477 Glycosyl transferase 4-like 6 144 1.1E-19 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RPIT_13865 e52b4a7e2e3b19d47703d887f86c949a 364 Pfam PF00534 Glycosyl transferases group 1 185 341 3.1E-29 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 RPIT_08855 d0801d90e4e785ba37588606afa82dee 295 SUPERFAMILY SSF161098 24 295 1.57E-62 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_08855 d0801d90e4e785ba37588606afa82dee 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 290 1.1E-24 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_08855 d0801d90e4e785ba37588606afa82dee 295 Gene3D G3DSA:1.10.3720.10 18 286 6.2E-57 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_00105 3d44568aab7559fda011f8e93583857a 176 SUPERFAMILY SSF52949 6 171 1.85E-54 T 13-10-2018 RPIT_00105 3d44568aab7559fda011f8e93583857a 176 Gene3D G3DSA:3.40.220.10 2 176 3.3E-61 T 13-10-2018 RPIT_00105 3d44568aab7559fda011f8e93583857a 176 Pfam PF01661 Macro domain 22 139 5.9E-37 T 13-10-2018 IPR002589 Macro domain RPIT_00105 3d44568aab7559fda011f8e93583857a 176 SMART SM00506 5 139 3.4E-42 T 13-10-2018 IPR002589 Macro domain RPIT_11720 c2487d3c513979ac7f474b0e985517db 269 SUPERFAMILY SSF52540 1 239 1.22E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_11720 c2487d3c513979ac7f474b0e985517db 269 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_11720 c2487d3c513979ac7f474b0e985517db 269 Pfam PF00005 ABC transporter 19 163 1.0E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_11720 c2487d3c513979ac7f474b0e985517db 269 SMART SM00382 27 212 6.7E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_11720 c2487d3c513979ac7f474b0e985517db 269 Gene3D G3DSA:3.40.50.300 1 256 7.6E-74 T 13-10-2018 RPIT_02050 5b42d7fd53266cb5aeef7dedb6397f69 492 Gene3D G3DSA:1.20.200.10 138 406 1.3E-102 T 13-10-2018 RPIT_02050 5b42d7fd53266cb5aeef7dedb6397f69 492 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 RPIT_02050 5b42d7fd53266cb5aeef7dedb6397f69 492 Gene3D G3DSA:1.10.40.30 407 457 5.8E-16 T 13-10-2018 RPIT_02050 5b42d7fd53266cb5aeef7dedb6397f69 492 Pfam PF00206 Lyase 9 341 3.1E-87 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal RPIT_02050 5b42d7fd53266cb5aeef7dedb6397f69 492 SUPERFAMILY SSF48557 1 455 2.2E-137 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 RPIT_02050 5b42d7fd53266cb5aeef7dedb6397f69 492 Pfam PF10415 Fumarase C C-terminus 407 457 1.4E-16 T 13-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RPIT_02050 5b42d7fd53266cb5aeef7dedb6397f69 492 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 3.3E-27 T 13-10-2018 IPR000362 Fumarate lyase family RPIT_02050 5b42d7fd53266cb5aeef7dedb6397f69 492 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 3.3E-27 T 13-10-2018 IPR000362 Fumarate lyase family RPIT_02050 5b42d7fd53266cb5aeef7dedb6397f69 492 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 3.3E-27 T 13-10-2018 IPR000362 Fumarate lyase family RPIT_02050 5b42d7fd53266cb5aeef7dedb6397f69 492 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 3.3E-27 T 13-10-2018 IPR000362 Fumarate lyase family RPIT_02050 5b42d7fd53266cb5aeef7dedb6397f69 492 Gene3D G3DSA:1.10.275.10 1 137 2.1E-56 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal RPIT_00080 f297a2df5e8f16332a4cbcda93df8096 159 Gene3D G3DSA:3.40.140.10 5 133 3.8E-25 T 13-10-2018 RPIT_00080 f297a2df5e8f16332a4cbcda93df8096 159 SUPERFAMILY SSF53927 2 109 4.61E-27 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 RPIT_00080 f297a2df5e8f16332a4cbcda93df8096 159 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 103 2.0E-9 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain RPIT_02575 f88ebebe1ec500bc9743f7af13b8fab0 292 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 289 21.273 T 13-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 RPIT_02575 f88ebebe1ec500bc9743f7af13b8fab0 292 Pfam PF01040 UbiA prenyltransferase family 21 252 9.8E-37 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 RPIT_02575 f88ebebe1ec500bc9743f7af13b8fab0 292 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 282 1.1E-83 T 13-10-2018 RPIT_02575 f88ebebe1ec500bc9743f7af13b8fab0 292 PIRSF PIRSF005355 1 292 1.2E-79 T 13-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 RPIT_05745 beb5540852f42b505c25ec6ced51e2ca 183 Pfam PF13411 MerR HTH family regulatory protein 33 96 2.3E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_05745 beb5540852f42b505c25ec6ced51e2ca 183 SUPERFAMILY SSF46955 33 111 1.83E-14 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily RPIT_05745 beb5540852f42b505c25ec6ced51e2ca 183 Gene3D G3DSA:1.10.1660.10 29 96 3.3E-12 T 13-10-2018 RPIT_05745 beb5540852f42b505c25ec6ced51e2ca 183 SMART SM00422 26 98 5.9E-17 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_09230 48360969d3b5a3b7424ae5ae6f1672fa 175 Pfam PF13586 Transposase DDE domain 73 168 3.5E-21 T 13-10-2018 IPR025668 Transposase DDE domain RPIT_09520 d7b526e6553ae5b891bdfdd554667706 450 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 4 420 3.1E-127 T 13-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 RPIT_09520 d7b526e6553ae5b891bdfdd554667706 450 SUPERFAMILY SSF54675 2 132 1.77E-44 T 13-10-2018 RPIT_09520 d7b526e6553ae5b891bdfdd554667706 450 PIRSF PIRSF000484 1 441 4.5E-101 T 13-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 RPIT_09520 d7b526e6553ae5b891bdfdd554667706 450 Gene3D G3DSA:3.20.20.70 146 305 4.0E-107 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_09520 d7b526e6553ae5b891bdfdd554667706 450 Gene3D G3DSA:3.20.140.10 5 368 4.0E-107 T 13-10-2018 RPIT_09520 d7b526e6553ae5b891bdfdd554667706 450 SUPERFAMILY SSF51690 134 424 1.47E-83 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 RPIT_03270 c358b90368e979a154f9ae40e3ec7a2e 459 SUPERFAMILY SSF51735 1 169 3.34E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_03270 c358b90368e979a154f9ae40e3ec7a2e 459 Gene3D G3DSA:3.90.110.10 170 459 4.4E-64 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RPIT_03270 c358b90368e979a154f9ae40e3ec7a2e 459 Gene3D G3DSA:3.40.50.720 1 168 1.2E-47 T 13-10-2018 RPIT_03270 c358b90368e979a154f9ae40e3ec7a2e 459 Pfam PF02056 Family 4 glycosyl hydrolase 30 186 9.9E-36 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RPIT_03270 c358b90368e979a154f9ae40e3ec7a2e 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 7.4E-37 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RPIT_03270 c358b90368e979a154f9ae40e3ec7a2e 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 7.4E-37 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RPIT_03270 c358b90368e979a154f9ae40e3ec7a2e 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 2 17 7.4E-37 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RPIT_03270 c358b90368e979a154f9ae40e3ec7a2e 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 196 208 7.4E-37 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RPIT_03270 c358b90368e979a154f9ae40e3ec7a2e 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 7.4E-37 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RPIT_03270 c358b90368e979a154f9ae40e3ec7a2e 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 7.4E-37 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RPIT_03270 c358b90368e979a154f9ae40e3ec7a2e 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 7.4E-37 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 RPIT_03270 c358b90368e979a154f9ae40e3ec7a2e 459 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 200 433 1.0E-39 T 13-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 RPIT_03270 c358b90368e979a154f9ae40e3ec7a2e 459 SUPERFAMILY SSF56327 170 456 4.46E-52 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RPIT_00420 23b964674e01f11fe6a000e725f3e242 537 Gene3D G3DSA:3.40.50.10330 207 339 6.8E-25 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 RPIT_00420 23b964674e01f11fe6a000e725f3e242 537 Pfam PF00781 Diacylglycerol kinase catalytic domain 211 332 2.2E-18 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 RPIT_00420 23b964674e01f11fe6a000e725f3e242 537 Gene3D G3DSA:2.60.200.40 340 496 1.2E-33 T 13-10-2018 RPIT_00420 23b964674e01f11fe6a000e725f3e242 537 SUPERFAMILY SSF111331 210 505 6.76E-61 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily RPIT_00420 23b964674e01f11fe6a000e725f3e242 537 SMART SM00046 197 330 0.0033 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 RPIT_09630 193e744739d03dfe61338d55e5f5792b 391 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 154 296 2.2E-41 T 13-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain RPIT_09630 193e744739d03dfe61338d55e5f5792b 391 Gene3D G3DSA:1.10.260.150 116 373 3.2E-65 T 13-10-2018 RPIT_09630 193e744739d03dfe61338d55e5f5792b 391 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 154 296 1.6E-44 T 13-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain RPIT_14100 79bdfe04a0c084de3b395e04d2f53cdd 363 Pfam PF02371 Transposase IS116/IS110/IS902 family 248 323 1.2E-13 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RPIT_14100 79bdfe04a0c084de3b395e04d2f53cdd 363 Pfam PF01548 Transposase 20 164 5.8E-16 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RPIT_01210 8bac9e606cf515110c104d79e71c81d8 204 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 100.124 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RPIT_01210 8bac9e606cf515110c104d79e71c81d8 204 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 13-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 RPIT_01210 8bac9e606cf515110c104d79e71c81d8 204 TIGRFAM TIGR00615 recR: recombination protein RecR 2 195 2.7E-77 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RPIT_01210 8bac9e606cf515110c104d79e71c81d8 204 Pfam PF02132 RecR protein 39 77 1.3E-12 T 13-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger RPIT_01210 8bac9e606cf515110c104d79e71c81d8 204 Gene3D G3DSA:1.10.8.420 1 52 1.7E-19 T 13-10-2018 RPIT_01210 8bac9e606cf515110c104d79e71c81d8 204 Pfam PF13662 Toprim domain 80 168 3.4E-24 T 13-10-2018 IPR006171 TOPRIM domain RPIT_01210 8bac9e606cf515110c104d79e71c81d8 204 SMART SM00493 79 164 1.9E-14 T 13-10-2018 IPR006171 TOPRIM domain RPIT_01210 8bac9e606cf515110c104d79e71c81d8 204 SUPERFAMILY SSF111304 2 197 3.92E-71 T 13-10-2018 IPR023627 Recombination protein RecR RPIT_01210 8bac9e606cf515110c104d79e71c81d8 204 Gene3D G3DSA:3.40.1360.10 76 197 8.4E-46 T 13-10-2018 RPIT_04230 c9b55f090105ba639ecd2d14fd82abe8 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 271 1.5E-13 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_04230 c9b55f090105ba639ecd2d14fd82abe8 309 Gene3D G3DSA:1.10.3720.10 61 274 3.2E-35 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_04230 c9b55f090105ba639ecd2d14fd82abe8 309 SUPERFAMILY SSF161098 78 258 1.26E-31 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_10420 36f82b44185e831199ba574320839067 100 Pfam PF01381 Helix-turn-helix 24 70 2.5E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_10420 36f82b44185e831199ba574320839067 100 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 7 85 1.9E-32 T 13-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 RPIT_10420 36f82b44185e831199ba574320839067 100 SUPERFAMILY SSF47413 11 94 6.4E-28 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_10420 36f82b44185e831199ba574320839067 100 Gene3D G3DSA:1.10.260.40 2 99 7.6E-36 T 13-10-2018 RPIT_10420 36f82b44185e831199ba574320839067 100 SMART SM00530 16 71 3.9E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_02530 44a5d05741173aed646bebf27a1483fa 618 SUPERFAMILY SSF51445 55 538 4.61E-107 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_02530 44a5d05741173aed646bebf27a1483fa 618 Gene3D G3DSA:3.90.400.10 158 233 4.3E-206 T 13-10-2018 RPIT_02530 44a5d05741173aed646bebf27a1483fa 618 Gene3D G3DSA:2.60.40.1180 542 618 5.6E-18 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta RPIT_02530 44a5d05741173aed646bebf27a1483fa 618 Gene3D G3DSA:3.20.20.80 71 535 4.3E-206 T 13-10-2018 RPIT_02530 44a5d05741173aed646bebf27a1483fa 618 SMART SM00642 73 510 1.1E-28 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_02530 44a5d05741173aed646bebf27a1483fa 618 Pfam PF00128 Alpha amylase, catalytic domain 81 289 4.1E-37 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_02530 44a5d05741173aed646bebf27a1483fa 618 Gene3D G3DSA:1.10.1740.10 1 68 1.1E-18 T 13-10-2018 RPIT_06380 65bbbb0ce5af05107b84818c4cb2778e 432 Gene3D G3DSA:3.40.50.1980 25 234 5.0E-59 T 13-10-2018 RPIT_06380 65bbbb0ce5af05107b84818c4cb2778e 432 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 431 36.676 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RPIT_06380 65bbbb0ce5af05107b84818c4cb2778e 432 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 232 264 - T 13-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 RPIT_06380 65bbbb0ce5af05107b84818c4cb2778e 432 PIRSF PIRSF000099 6 432 7.8E-142 T 13-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RPIT_06380 65bbbb0ce5af05107b84818c4cb2778e 432 PRINTS PR00083 Histidinol dehydrogenase signature 32 56 1.3E-79 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RPIT_06380 65bbbb0ce5af05107b84818c4cb2778e 432 PRINTS PR00083 Histidinol dehydrogenase signature 203 228 1.3E-79 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RPIT_06380 65bbbb0ce5af05107b84818c4cb2778e 432 PRINTS PR00083 Histidinol dehydrogenase signature 172 198 1.3E-79 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RPIT_06380 65bbbb0ce5af05107b84818c4cb2778e 432 PRINTS PR00083 Histidinol dehydrogenase signature 254 273 1.3E-79 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RPIT_06380 65bbbb0ce5af05107b84818c4cb2778e 432 PRINTS PR00083 Histidinol dehydrogenase signature 135 161 1.3E-79 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RPIT_06380 65bbbb0ce5af05107b84818c4cb2778e 432 PRINTS PR00083 Histidinol dehydrogenase signature 232 253 1.3E-79 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RPIT_06380 65bbbb0ce5af05107b84818c4cb2778e 432 PRINTS PR00083 Histidinol dehydrogenase signature 324 349 1.3E-79 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RPIT_06380 65bbbb0ce5af05107b84818c4cb2778e 432 PRINTS PR00083 Histidinol dehydrogenase signature 365 383 1.3E-79 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RPIT_06380 65bbbb0ce5af05107b84818c4cb2778e 432 SUPERFAMILY SSF53720 23 430 1.75E-64 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 RPIT_06380 65bbbb0ce5af05107b84818c4cb2778e 432 Pfam PF00815 Histidinol dehydrogenase 19 430 9.4E-147 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RPIT_06380 65bbbb0ce5af05107b84818c4cb2778e 432 Gene3D G3DSA:3.40.50.1980 235 376 3.5E-50 T 13-10-2018 RPIT_06380 65bbbb0ce5af05107b84818c4cb2778e 432 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 32 430 1.6E-133 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RPIT_04680 80dcf9af999ab05284aabb799faf1eee 365 Gene3D G3DSA:3.40.1160.10 1 262 4.2E-85 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily RPIT_04680 80dcf9af999ab05284aabb799faf1eee 365 PIRSF PIRSF000729 4 364 9.7E-121 T 13-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 RPIT_04680 80dcf9af999ab05284aabb799faf1eee 365 SUPERFAMILY SSF53633 9 255 9.82E-65 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily RPIT_04680 80dcf9af999ab05284aabb799faf1eee 365 SMART SM00359 276 355 3.7E-12 T 13-10-2018 IPR002478 PUA domain GO:0003723 RPIT_04680 80dcf9af999ab05284aabb799faf1eee 365 Pfam PF00696 Amino acid kinase family 9 235 7.9E-43 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 RPIT_04680 80dcf9af999ab05284aabb799faf1eee 365 Pfam PF01472 PUA domain 278 345 4.7E-16 T 13-10-2018 IPR002478 PUA domain GO:0003723 RPIT_04680 80dcf9af999ab05284aabb799faf1eee 365 SUPERFAMILY SSF88697 276 362 8.08E-17 T 13-10-2018 IPR015947 PUA-like superfamily RPIT_04680 80dcf9af999ab05284aabb799faf1eee 365 TIGRFAM TIGR01027 proB: glutamate 5-kinase 9 361 7.2E-122 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RPIT_04680 80dcf9af999ab05284aabb799faf1eee 365 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 5.6E-55 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 RPIT_04680 80dcf9af999ab05284aabb799faf1eee 365 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 5.6E-55 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 RPIT_04680 80dcf9af999ab05284aabb799faf1eee 365 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 5.6E-55 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 RPIT_04680 80dcf9af999ab05284aabb799faf1eee 365 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 5.6E-55 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 RPIT_04680 80dcf9af999ab05284aabb799faf1eee 365 PRINTS PR00474 Glutamate 5-kinase family signature 211 231 5.6E-55 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 RPIT_04680 80dcf9af999ab05284aabb799faf1eee 365 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 258 35.413 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RPIT_04680 80dcf9af999ab05284aabb799faf1eee 365 ProSitePatterns PS00902 Glutamate 5-kinase signature. 209 226 - T 13-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RPIT_04680 80dcf9af999ab05284aabb799faf1eee 365 Gene3D G3DSA:2.30.130.10 266 363 4.3E-24 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 RPIT_06485 25383ab31024b65857c4a831924a14ed 803 Gene3D G3DSA:1.25.40.10 8 317 8.5E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 RPIT_06485 25383ab31024b65857c4a831924a14ed 803 SUPERFAMILY SSF48452 5 111 2.61E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 RPIT_06485 25383ab31024b65857c4a831924a14ed 803 SUPERFAMILY SSF48452 84 192 1.82E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 RPIT_06485 25383ab31024b65857c4a831924a14ed 803 Pfam PF12770 CHAT domain 569 781 2.2E-22 T 13-10-2018 IPR024983 CHAT domain RPIT_06485 25383ab31024b65857c4a831924a14ed 803 SUPERFAMILY SSF48452 162 264 2.47E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 RPIT_03830 117acab6fa3f02fdc31fa1e5365a5856 296 Pfam PF02219 Methylenetetrahydrofolate reductase 18 292 5.4E-78 T 13-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 RPIT_03830 117acab6fa3f02fdc31fa1e5365a5856 296 Gene3D G3DSA:3.20.20.220 10 294 7.3E-88 T 13-10-2018 RPIT_03830 117acab6fa3f02fdc31fa1e5365a5856 296 SUPERFAMILY SSF51730 17 293 1.37E-81 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like RPIT_07465 1daf78218f21dc638d6b61c083d38ec0 159 Gene3D G3DSA:1.25.40.10 17 133 1.9E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 RPIT_07465 1daf78218f21dc638d6b61c083d38ec0 159 SUPERFAMILY SSF81901 35 115 4.19E-9 T 13-10-2018 RPIT_07055 0fbb4246a7a67ecbdd84901eaafc6d25 332 SUPERFAMILY SSF52540 5 153 5.29E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_07055 0fbb4246a7a67ecbdd84901eaafc6d25 332 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 6 291 8.3E-74 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 RPIT_07055 0fbb4246a7a67ecbdd84901eaafc6d25 332 Gene3D G3DSA:3.40.50.300 9 289 5.2E-87 T 13-10-2018 RPIT_07055 0fbb4246a7a67ecbdd84901eaafc6d25 332 Pfam PF01715 IPP transferase 44 285 4.4E-73 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 RPIT_07055 0fbb4246a7a67ecbdd84901eaafc6d25 332 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 5 301 27.077 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 RPIT_07055 0fbb4246a7a67ecbdd84901eaafc6d25 332 Gene3D G3DSA:1.10.20.140 117 187 5.2E-87 T 13-10-2018 RPIT_08365 49753cb75766322cf2cb6f3aaa9f5386 882 SUPERFAMILY SSF48452 156 363 1.21E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 RPIT_08365 49753cb75766322cf2cb6f3aaa9f5386 882 Gene3D G3DSA:1.25.40.10 201 313 3.3E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 RPIT_08365 49753cb75766322cf2cb6f3aaa9f5386 882 Gene3D G3DSA:1.25.40.10 314 448 2.7E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 RPIT_08365 49753cb75766322cf2cb6f3aaa9f5386 882 SUPERFAMILY SSF48452 55 165 2.02E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 RPIT_08365 49753cb75766322cf2cb6f3aaa9f5386 882 Gene3D G3DSA:1.25.40.10 50 200 2.3E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 RPIT_08365 49753cb75766322cf2cb6f3aaa9f5386 882 Pfam PF12770 CHAT domain 719 879 3.6E-14 T 13-10-2018 IPR024983 CHAT domain RPIT_09980 02883f303cf052141c5e94d2e0cfaef2 198 SUPERFAMILY SSF51161 12 196 1.39E-49 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily RPIT_09980 02883f303cf052141c5e94d2e0cfaef2 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 139 171 8.9E-9 T 13-10-2018 IPR001451 Hexapeptide repeat RPIT_09980 02883f303cf052141c5e94d2e0cfaef2 198 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 101 113 0.017 T 13-10-2018 IPR001451 Hexapeptide repeat RPIT_09980 02883f303cf052141c5e94d2e0cfaef2 198 Pfam PF12464 Maltose acetyltransferase 17 65 1.5E-5 T 13-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 RPIT_09980 02883f303cf052141c5e94d2e0cfaef2 198 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 146 174 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RPIT_09980 02883f303cf052141c5e94d2e0cfaef2 198 Gene3D G3DSA:2.160.10.10 7 192 5.3E-60 T 13-10-2018 RPIT_09980 02883f303cf052141c5e94d2e0cfaef2 198 SMART SM01266 12 66 2.3E-5 T 13-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 RPIT_09215 211411d1906e895659b5ad4ef9135407 177 Gene3D G3DSA:3.30.240.20 85 156 5.9E-12 T 13-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily RPIT_09215 211411d1906e895659b5ad4ef9135407 177 Pfam PF04239 Protein of unknown function (DUF421) 95 155 2.6E-7 T 13-10-2018 IPR007353 Protein of unknown function DUF421 RPIT_13660 03c97106a221d2f97e18cc584c760681 342 Pfam PF01551 Peptidase family M23 42 140 5.9E-26 T 13-10-2018 IPR016047 Peptidase M23 RPIT_13660 03c97106a221d2f97e18cc584c760681 342 Gene3D G3DSA:2.70.70.10 7 147 1.1E-43 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_13660 03c97106a221d2f97e18cc584c760681 342 SUPERFAMILY SSF51261 17 144 1.31E-47 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_03160 c9112c6c86a13ab89b18d80f076ad465 134 SUPERFAMILY SSF56047 3 134 3.14E-43 T 13-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03160 c9112c6c86a13ab89b18d80f076ad465 134 Gene3D G3DSA:3.30.1370.30 4 79 1.4E-27 T 13-10-2018 RPIT_03160 c9112c6c86a13ab89b18d80f076ad465 134 Pfam PF00410 Ribosomal protein S8 5 134 2.4E-50 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03160 c9112c6c86a13ab89b18d80f076ad465 134 ProSitePatterns PS00053 Ribosomal protein S8 signature. 104 121 - T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03160 c9112c6c86a13ab89b18d80f076ad465 134 Gene3D G3DSA:3.30.1490.10 80 134 3.9E-26 T 13-10-2018 RPIT_03160 c9112c6c86a13ab89b18d80f076ad465 134 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 134 31.819 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_06305 40a31e147bcb805a4219f3ef339640f5 377 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 19 309 23.912 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RPIT_06305 40a31e147bcb805a4219f3ef339640f5 377 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 128 295 4.4E-45 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RPIT_06305 40a31e147bcb805a4219f3ef339640f5 377 Gene3D G3DSA:1.20.1640.10 130 320 1.5E-13 T 13-10-2018 RPIT_06305 40a31e147bcb805a4219f3ef339640f5 377 Pfam PF07549 SecD/SecF GG Motif 42 61 6.6E-5 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RPIT_06305 40a31e147bcb805a4219f3ef339640f5 377 Pfam PF02355 Protein export membrane protein 125 307 1.3E-55 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RPIT_06305 40a31e147bcb805a4219f3ef339640f5 377 PRINTS PR01755 Bacterial translocase SecF protein signature 46 61 1.9E-16 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RPIT_06305 40a31e147bcb805a4219f3ef339640f5 377 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 1.9E-16 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RPIT_06305 40a31e147bcb805a4219f3ef339640f5 377 PRINTS PR01755 Bacterial translocase SecF protein signature 242 257 1.9E-16 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RPIT_06305 40a31e147bcb805a4219f3ef339640f5 377 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 47 298 3.2E-62 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RPIT_06305 40a31e147bcb805a4219f3ef339640f5 377 SUPERFAMILY SSF82866 98 310 2.35E-35 T 13-10-2018 RPIT_10655 e599c809b5a3fddace064a3a19af1447 505 SUPERFAMILY SSF117892 73 210 2.22E-27 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily RPIT_10655 e599c809b5a3fddace064a3a19af1447 505 Pfam PF15975 Flotillin 379 466 1.8E-9 T 13-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 RPIT_10655 e599c809b5a3fddace064a3a19af1447 505 Gene3D G3DSA:3.30.479.30 82 196 2.2E-30 T 13-10-2018 RPIT_10655 e599c809b5a3fddace064a3a19af1447 505 Pfam PF01145 SPFH domain / Band 7 family 30 229 3.9E-22 T 13-10-2018 IPR001107 Band 7 domain RPIT_10655 e599c809b5a3fddace064a3a19af1447 505 SMART SM00244 26 218 7.8E-6 T 13-10-2018 IPR001107 Band 7 domain RPIT_01355 727b87387dfc73925c56bfeb59aa2415 301 SUPERFAMILY SSF56300 41 286 3.95E-27 T 13-10-2018 RPIT_01355 727b87387dfc73925c56bfeb59aa2415 301 Gene3D G3DSA:3.60.21.10 46 265 2.2E-14 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like RPIT_01355 727b87387dfc73925c56bfeb59aa2415 301 Pfam PF00149 Calcineurin-like phosphoesterase 47 232 2.5E-8 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 RPIT_07400 57e11478fa3d69d6aca47f799cd3e73b 92 Gene3D G3DSA:1.10.10.60 57 92 4.2E-6 T 13-10-2018 RPIT_07400 57e11478fa3d69d6aca47f799cd3e73b 92 Gene3D G3DSA:3.40.50.880 1 56 1.8E-12 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_07400 57e11478fa3d69d6aca47f799cd3e73b 92 SUPERFAMILY SSF52317 5 56 1.83E-9 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_02105 b4b2819cc92918eb62993806e352a9e6 217 Gene3D G3DSA:1.10.10.10 1 47 3.3E-5 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_02105 b4b2819cc92918eb62993806e352a9e6 217 Pfam PF09339 IclR helix-turn-helix domain 1 43 4.4E-5 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIT_02105 b4b2819cc92918eb62993806e352a9e6 217 SUPERFAMILY SSF46785 1 130 4.8E-8 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_12515 5035c93050812c543aa729a2c7e49966 642 Gene3D G3DSA:3.40.50.2000 192 375 1.1E-106 T 13-10-2018 RPIT_12515 5035c93050812c543aa729a2c7e49966 642 Pfam PF00534 Glycosyl transferases group 1 213 374 3.6E-35 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 RPIT_12515 5035c93050812c543aa729a2c7e49966 642 SUPERFAMILY SSF102588 402 613 2.75E-41 T 13-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 RPIT_12515 5035c93050812c543aa729a2c7e49966 642 Pfam PF13439 Glycosyltransferase Family 4 21 195 3.8E-26 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RPIT_12515 5035c93050812c543aa729a2c7e49966 642 Pfam PF02585 GlcNAc-PI de-N-acetylase 404 567 4.2E-22 T 13-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 RPIT_12515 5035c93050812c543aa729a2c7e49966 642 Gene3D G3DSA:3.40.50.2000 6 391 1.1E-106 T 13-10-2018 RPIT_12515 5035c93050812c543aa729a2c7e49966 642 SUPERFAMILY SSF53756 1 395 1.61E-77 T 13-10-2018 RPIT_12515 5035c93050812c543aa729a2c7e49966 642 Gene3D G3DSA:3.40.50.10320 400 632 9.2E-58 T 13-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 RPIT_00040 3ebb09dda618fff865049414b6f37dfc 252 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 8 244 6.9E-84 T 13-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 RPIT_00040 3ebb09dda618fff865049414b6f37dfc 252 Gene3D G3DSA:3.30.950.10 124 251 6.0E-43 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 RPIT_00040 3ebb09dda618fff865049414b6f37dfc 252 SUPERFAMILY SSF53790 4 245 4.58E-70 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 RPIT_00040 3ebb09dda618fff865049414b6f37dfc 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 10 220 2.0E-42 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 RPIT_00040 3ebb09dda618fff865049414b6f37dfc 252 Gene3D G3DSA:3.40.1010.10 7 123 2.8E-39 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 RPIT_00925 4e3e56f7fec3ece1bd9a41702313b1d3 306 Pfam PF12867 DinB superfamily 59 177 6.3E-11 T 13-10-2018 IPR024775 DinB-like domain RPIT_00925 4e3e56f7fec3ece1bd9a41702313b1d3 306 Pfam PF12796 Ankyrin repeats (3 copies) 232 300 5.1E-7 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain RPIT_00925 4e3e56f7fec3ece1bd9a41702313b1d3 306 SUPERFAMILY SSF109854 2 185 2.41E-15 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes RPIT_00925 4e3e56f7fec3ece1bd9a41702313b1d3 306 Gene3D G3DSA:1.25.40.20 189 304 2.9E-14 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily RPIT_00925 4e3e56f7fec3ece1bd9a41702313b1d3 306 Gene3D G3DSA:1.20.120.450 51 188 5.7E-6 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes RPIT_00925 4e3e56f7fec3ece1bd9a41702313b1d3 306 SUPERFAMILY SSF48403 189 301 1.18E-14 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily RPIT_08755 2d77803443367fa54261afeacfaccf05 103 PRINTS PR00112 Acylphosphatase signature 17 32 2.1E-5 T 13-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RPIT_08755 2d77803443367fa54261afeacfaccf05 103 PRINTS PR00112 Acylphosphatase signature 38 63 2.1E-5 T 13-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RPIT_08755 2d77803443367fa54261afeacfaccf05 103 Gene3D G3DSA:3.30.70.100 14 102 3.0E-28 T 13-10-2018 RPIT_08755 2d77803443367fa54261afeacfaccf05 103 Pfam PF00708 Acylphosphatase 19 101 3.6E-24 T 13-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RPIT_08755 2d77803443367fa54261afeacfaccf05 103 SUPERFAMILY SSF54975 16 101 4.8E-26 T 13-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RPIT_08755 2d77803443367fa54261afeacfaccf05 103 ProSitePatterns PS00150 Acylphosphatase signature 1. 22 32 - T 13-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RPIT_09655 45c1215f8785398951fb6577f3079af9 524 SUPERFAMILY SSF52096 274 524 3.61E-90 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily RPIT_09655 45c1215f8785398951fb6577f3079af9 524 SUPERFAMILY SSF52096 11 261 3.61E-74 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily RPIT_09655 45c1215f8785398951fb6577f3079af9 524 Gene3D G3DSA:3.90.226.10 272 524 4.7E-94 T 13-10-2018 RPIT_09655 45c1215f8785398951fb6577f3079af9 524 Gene3D G3DSA:3.90.226.10 1 263 5.7E-91 T 13-10-2018 RPIT_09655 45c1215f8785398951fb6577f3079af9 524 Pfam PF01039 Carboxyl transferase domain 33 522 3.4E-192 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 RPIT_10025 ed682c7083f14d4f603df5879b53f611 506 PRINTS PR00173 Glutamate-aspartate symporter signature 261 283 1.7E-5 T 13-10-2018 RPIT_10025 ed682c7083f14d4f603df5879b53f611 506 PRINTS PR00173 Glutamate-aspartate symporter signature 468 487 1.7E-5 T 13-10-2018 RPIT_10025 ed682c7083f14d4f603df5879b53f611 506 PRINTS PR00173 Glutamate-aspartate symporter signature 105 125 1.7E-5 T 13-10-2018 RPIT_10025 ed682c7083f14d4f603df5879b53f611 506 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 505 4.8E-24 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_10025 ed682c7083f14d4f603df5879b53f611 506 Gene3D G3DSA:1.10.3720.10 260 499 2.0E-14 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_10025 ed682c7083f14d4f603df5879b53f611 506 SUPERFAMILY SSF161098 313 490 1.48E-11 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_10540 ee3f5f4e8e792483361f8b209617ebb3 225 Pfam PF03006 Haemolysin-III related 17 213 6.8E-41 T 13-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 RPIT_12130 445fd4704c7467dc66e91b243f084d15 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 5.3E-8 T 13-10-2018 RPIT_12130 445fd4704c7467dc66e91b243f084d15 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 161 186 5.3E-8 T 13-10-2018 RPIT_12130 445fd4704c7467dc66e91b243f084d15 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 5.3E-8 T 13-10-2018 RPIT_12130 445fd4704c7467dc66e91b243f084d15 454 SUPERFAMILY SSF51905 1 338 2.52E-33 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_12130 445fd4704c7467dc66e91b243f084d15 454 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 328 1.6E-51 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIT_12130 445fd4704c7467dc66e91b243f084d15 454 Gene3D G3DSA:3.50.50.100 1 407 1.4E-105 T 13-10-2018 RPIT_12130 445fd4704c7467dc66e91b243f084d15 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 1.2E-10 T 13-10-2018 RPIT_12130 445fd4704c7467dc66e91b243f084d15 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 1.2E-10 T 13-10-2018 RPIT_12130 445fd4704c7467dc66e91b243f084d15 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 1.2E-10 T 13-10-2018 RPIT_12130 445fd4704c7467dc66e91b243f084d15 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.2E-10 T 13-10-2018 RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 Gene3D G3DSA:1.10.1780.10 2 148 1.8E-27 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 Pfam PF07724 AAA domain (Cdc48 subfamily) 597 758 2.1E-51 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 709 723 3.9E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 676 694 3.9E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 647 665 3.9E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 602 620 3.9E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 146 6.8E-10 T 13-10-2018 IPR004176 Clp, N-terminal RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 67 2.8E-4 T 13-10-2018 IPR004176 Clp, N-terminal RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 Gene3D G3DSA:1.10.8.60 765 854 8.7E-27 T 13-10-2018 RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 SUPERFAMILY SSF52540 547 849 3.43E-78 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 Gene3D G3DSA:3.40.50.300 345 545 1.2E-69 T 13-10-2018 RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 SUPERFAMILY SSF52540 161 546 5.92E-96 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 337 5.1E-13 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 Gene3D G3DSA:3.40.50.300 149 344 6.8E-73 T 13-10-2018 RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 852 0.0 T 13-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 SUPERFAMILY SSF81923 4 156 2.22E-30 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 SMART SM01086 765 854 5.5E-37 T 13-10-2018 IPR019489 Clp ATPase, C-terminal RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 296 308 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 765 844 8.4E-27 T 13-10-2018 IPR019489 Clp ATPase, C-terminal RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 632 650 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 SMART SM00382 199 344 9.0E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 SMART SM00382 598 745 3.5E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_11800 14dbc37c9af57b90af4cc99de5ecf13d 855 Gene3D G3DSA:3.40.50.300 551 764 1.8E-83 T 13-10-2018 RPIT_05405 241d0e32088f92230d98e95a2a9a8dd8 362 SUPERFAMILY SSF52374 34 360 1.31E-69 T 13-10-2018 RPIT_05405 241d0e32088f92230d98e95a2a9a8dd8 362 Gene3D G3DSA:3.40.50.620 35 358 9.7E-93 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_05405 241d0e32088f92230d98e95a2a9a8dd8 362 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 33 358 1.0E-66 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RPIT_05405 241d0e32088f92230d98e95a2a9a8dd8 362 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 51 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_05405 241d0e32088f92230d98e95a2a9a8dd8 362 Gene3D G3DSA:1.10.240.10 223 328 9.7E-93 T 13-10-2018 RPIT_05405 241d0e32088f92230d98e95a2a9a8dd8 362 Pfam PF00579 tRNA synthetases class I (W and Y) 32 315 1.6E-50 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 RPIT_05405 241d0e32088f92230d98e95a2a9a8dd8 362 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 230 240 1.5E-20 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RPIT_05405 241d0e32088f92230d98e95a2a9a8dd8 362 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 46 62 1.5E-20 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RPIT_05405 241d0e32088f92230d98e95a2a9a8dd8 362 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 174 195 1.5E-20 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RPIT_05405 241d0e32088f92230d98e95a2a9a8dd8 362 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 97 116 1.5E-20 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RPIT_06210 f1197453bf140a06e95763d7d8b6c3bb 165 Gene3D G3DSA:3.40.50.300 1 163 8.1E-47 T 13-10-2018 RPIT_06210 f1197453bf140a06e95763d7d8b6c3bb 165 Pfam PF01202 Shikimate kinase 9 158 1.7E-42 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 RPIT_06210 f1197453bf140a06e95763d7d8b6c3bb 165 PRINTS PR01100 Shikimate kinase family signature 72 81 6.4E-16 T 13-10-2018 RPIT_06210 f1197453bf140a06e95763d7d8b6c3bb 165 PRINTS PR01100 Shikimate kinase family signature 55 63 6.4E-16 T 13-10-2018 RPIT_06210 f1197453bf140a06e95763d7d8b6c3bb 165 PRINTS PR01100 Shikimate kinase family signature 92 109 6.4E-16 T 13-10-2018 RPIT_06210 f1197453bf140a06e95763d7d8b6c3bb 165 PRINTS PR01100 Shikimate kinase family signature 27 40 6.4E-16 T 13-10-2018 RPIT_06210 f1197453bf140a06e95763d7d8b6c3bb 165 PRINTS PR01100 Shikimate kinase family signature 3 18 6.4E-16 T 13-10-2018 RPIT_06210 f1197453bf140a06e95763d7d8b6c3bb 165 Hamap MF_00109 Shikimate kinase [aroK]. 1 163 24.137 T 13-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 RPIT_06210 f1197453bf140a06e95763d7d8b6c3bb 165 SUPERFAMILY SSF52540 2 157 4.71E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_08595 a746b85ed3859d2e454d4293580c0bd4 82 SUPERFAMILY SSF54814 17 60 1.24E-6 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 RPIT_08595 a746b85ed3859d2e454d4293580c0bd4 82 Hamap MF_00088 UPF0109 protein . 2 74 19.786 T 13-10-2018 IPR020627 Uncharacterised protein family UPF0109 RPIT_08595 a746b85ed3859d2e454d4293580c0bd4 82 Pfam PF13083 KH domain 4 72 8.9E-20 T 13-10-2018 RPIT_06140 c67f59c58006b3c8a44c92ab6a4fd15a 303 Pfam PF00551 Formyl transferase 2 177 4.3E-32 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIT_06140 c67f59c58006b3c8a44c92ab6a4fd15a 303 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 294 1.4E-70 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 RPIT_06140 c67f59c58006b3c8a44c92ab6a4fd15a 303 Gene3D G3DSA:3.40.50.170 1 203 1.9E-65 T 13-10-2018 RPIT_06140 c67f59c58006b3c8a44c92ab6a4fd15a 303 SUPERFAMILY SSF53328 1 201 2.49E-52 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIT_06140 c67f59c58006b3c8a44c92ab6a4fd15a 303 SUPERFAMILY SSF50486 203 294 1.16E-25 T 13-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 RPIT_06140 c67f59c58006b3c8a44c92ab6a4fd15a 303 Gene3D G3DSA:3.10.25.10 205 299 6.7E-24 T 13-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIT_06140 c67f59c58006b3c8a44c92ab6a4fd15a 303 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 299 32.444 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 RPIT_06140 c67f59c58006b3c8a44c92ab6a4fd15a 303 Pfam PF02911 Formyl transferase, C-terminal domain 201 294 3.8E-23 T 13-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIT_03295 5230d8414c851cec50d45f6290d832ce 500 SUPERFAMILY SSF52540 4 232 4.37E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_03295 5230d8414c851cec50d45f6290d832ce 500 Gene3D G3DSA:3.40.50.300 1 246 8.1E-50 T 13-10-2018 RPIT_03295 5230d8414c851cec50d45f6290d832ce 500 SMART SM00382 30 219 1.1E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_03295 5230d8414c851cec50d45f6290d832ce 500 SMART SM00382 279 473 4.6E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_03295 5230d8414c851cec50d45f6290d832ce 500 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_03295 5230d8414c851cec50d45f6290d832ce 500 Pfam PF00005 ABC transporter 21 171 2.9E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_03295 5230d8414c851cec50d45f6290d832ce 500 SUPERFAMILY SSF52540 265 483 2.19E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_03295 5230d8414c851cec50d45f6290d832ce 500 Gene3D G3DSA:3.40.50.300 253 493 1.8E-43 T 13-10-2018 RPIT_03295 5230d8414c851cec50d45f6290d832ce 500 Pfam PF00005 ABC transporter 271 424 1.5E-19 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_00075 7b3fdc7f3647da1e74b698cf7ef7c2ac 123 Gene3D G3DSA:3.10.450.50 3 121 1.3E-9 T 13-10-2018 RPIT_00075 7b3fdc7f3647da1e74b698cf7ef7c2ac 123 Pfam PF14534 Domain of unknown function (DUF4440) 13 111 3.5E-9 T 13-10-2018 IPR027843 Domain of unknown function DUF4440 RPIT_00075 7b3fdc7f3647da1e74b698cf7ef7c2ac 123 SUPERFAMILY SSF54427 26 120 3.38E-12 T 13-10-2018 IPR032710 NTF2-like domain superfamily RPIT_05530 21f330a2b27db480e296697aab3749db 320 Pfam PF11268 Protein of unknown function (DUF3071) 3 118 6.4E-34 T 13-10-2018 IPR021421 Protein of unknown function DUF3071 RPIT_02595 ab801f77437ba19d4b257257e78288c9 231 Gene3D G3DSA:3.40.50.150 21 231 4.9E-57 T 13-10-2018 RPIT_02595 ab801f77437ba19d4b257257e78288c9 231 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 15 230 2.5E-67 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 RPIT_02595 ab801f77437ba19d4b257257e78288c9 231 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 139 153 - T 13-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 RPIT_02595 ab801f77437ba19d4b257257e78288c9 231 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 6 230 32.833 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 RPIT_02595 ab801f77437ba19d4b257257e78288c9 231 Pfam PF01209 ubiE/COQ5 methyltransferase family 12 230 1.1E-58 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 RPIT_02595 ab801f77437ba19d4b257257e78288c9 231 SUPERFAMILY SSF53335 11 230 1.24E-43 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_08980 95cb8df629c0b2b90d375665050986a4 237 Gene3D G3DSA:3.40.225.10 12 234 1.3E-61 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily RPIT_08980 95cb8df629c0b2b90d375665050986a4 237 SUPERFAMILY SSF53639 15 228 2.16E-57 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily RPIT_08980 95cb8df629c0b2b90d375665050986a4 237 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 22 202 3.1E-47 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal RPIT_08980 95cb8df629c0b2b90d375665050986a4 237 SMART SM01007 21 204 5.8E-62 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal RPIT_12510 d553128b2efe0c00e69a1639242cb7d8 183 SUPERFAMILY SSF52540 11 172 2.08E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_12510 d553128b2efe0c00e69a1639242cb7d8 183 Gene3D G3DSA:3.40.50.300 13 179 4.3E-61 T 13-10-2018 RPIT_12510 d553128b2efe0c00e69a1639242cb7d8 183 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 15 170 1.6E-56 T 13-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 RPIT_12510 d553128b2efe0c00e69a1639242cb7d8 183 Pfam PF01202 Shikimate kinase 22 130 5.5E-9 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 RPIT_00760 20dc3bb483796880e5d63aa1bb49e1c1 201 PIRSF PIRSF000709 4 189 5.9E-6 T 13-10-2018 RPIT_00760 20dc3bb483796880e5d63aa1bb49e1c1 201 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 9 199 7.5E-47 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_00760 20dc3bb483796880e5d63aa1bb49e1c1 201 SUPERFAMILY SSF53254 7 198 3.37E-44 T 13-10-2018 IPR029033 Histidine phosphatase superfamily RPIT_00760 20dc3bb483796880e5d63aa1bb49e1c1 201 SMART SM00855 8 160 1.1E-16 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_00760 20dc3bb483796880e5d63aa1bb49e1c1 201 Gene3D G3DSA:3.40.50.1240 2 201 1.9E-47 T 13-10-2018 IPR029033 Histidine phosphatase superfamily RPIT_05670 6a50eaa98da55a745430c15b401b8f65 292 SUPERFAMILY SSF103481 190 283 5.75E-10 T 13-10-2018 RPIT_05670 6a50eaa98da55a745430c15b401b8f65 292 Pfam PF00892 EamA-like transporter family 149 279 1.3E-16 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 RPIT_13165 5f7c5051948863c02998ba1ba730b0c2 195 SUPERFAMILY SSF46689 4 85 4.77E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_13165 5f7c5051948863c02998ba1ba730b0c2 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 3.2E-13 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_13165 5f7c5051948863c02998ba1ba730b0c2 195 Gene3D G3DSA:1.10.357.10 2 166 2.5E-24 T 13-10-2018 RPIT_12690 87df84f95d575f38d68c9995c408c8b7 153 SUPERFAMILY SSF49879 59 152 1.4E-22 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 RPIT_12690 87df84f95d575f38d68c9995c408c8b7 153 SMART SM00240 79 130 3.0E-10 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RPIT_12690 87df84f95d575f38d68c9995c408c8b7 153 Pfam PF00498 FHA domain 81 145 5.2E-16 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RPIT_12690 87df84f95d575f38d68c9995c408c8b7 153 Gene3D G3DSA:2.60.200.20 39 153 3.3E-23 T 13-10-2018 RPIT_06660 420f97e0f5980e011573ea2c4fc71613 135 Gene3D G3DSA:2.60.15.10 2 129 1.4E-29 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06660 420f97e0f5980e011573ea2c4fc71613 135 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 129 17.677 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06660 420f97e0f5980e011573ea2c4fc71613 135 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 6 120 1.1E-27 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06660 420f97e0f5980e011573ea2c4fc71613 135 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 7.2E-26 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06660 420f97e0f5980e011573ea2c4fc71613 135 SUPERFAMILY SSF51344 6 87 1.7E-22 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06660 420f97e0f5980e011573ea2c4fc71613 135 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 85 6.0E-15 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_01500 a9f0f6f1f1dd5f2bad8ca8d9333770fe 449 Pfam PF01593 Flavin containing amine oxidoreductase 11 444 1.3E-62 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 RPIT_01500 a9f0f6f1f1dd5f2bad8ca8d9333770fe 449 Gene3D G3DSA:3.50.50.60 3 444 4.4E-122 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_01500 a9f0f6f1f1dd5f2bad8ca8d9333770fe 449 SUPERFAMILY SSF51905 3 446 2.5E-60 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_01500 a9f0f6f1f1dd5f2bad8ca8d9333770fe 449 Gene3D G3DSA:3.90.660.10 39 396 4.4E-122 T 13-10-2018 RPIT_01500 a9f0f6f1f1dd5f2bad8ca8d9333770fe 449 SUPERFAMILY SSF54373 289 393 3.14E-24 T 13-10-2018 RPIT_01500 a9f0f6f1f1dd5f2bad8ca8d9333770fe 449 Gene3D G3DSA:1.10.405.10 106 196 4.4E-122 T 13-10-2018 RPIT_03040 1f0c79915551c33278052d39b774cedc 218 ProSitePatterns PS00474 Ribosomal protein L3 signature. 106 129 - T 13-10-2018 IPR019926 Ribosomal protein L3, conserved site RPIT_03040 1f0c79915551c33278052d39b774cedc 218 SUPERFAMILY SSF50447 5 216 9.71E-84 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily RPIT_03040 1f0c79915551c33278052d39b774cedc 218 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 6 212 40.214 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03040 1f0c79915551c33278052d39b774cedc 218 Pfam PF00297 Ribosomal protein L3 97 186 2.2E-18 T 13-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03040 1f0c79915551c33278052d39b774cedc 218 Gene3D G3DSA:2.40.30.10 125 215 3.0E-17 T 13-10-2018 RPIT_03040 1f0c79915551c33278052d39b774cedc 218 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 8 209 1.1E-90 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03040 1f0c79915551c33278052d39b774cedc 218 Gene3D G3DSA:2.40.50.620 36 100 1.9E-20 T 13-10-2018 RPIT_05220 3269f7c1969bd6bde08b576223a5ba40 241 Gene3D G3DSA:3.30.950.10 135 241 1.0E-29 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 RPIT_05220 3269f7c1969bd6bde08b576223a5ba40 241 Gene3D G3DSA:3.40.1010.10 1 134 1.3E-27 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 RPIT_05220 3269f7c1969bd6bde08b576223a5ba40 241 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 214 6.3E-27 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 RPIT_05220 3269f7c1969bd6bde08b576223a5ba40 241 SUPERFAMILY SSF53790 1 238 5.23E-27 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 RPIT_02900 8f32d17fe43c52f157521672bbad822e 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 64 287 4.2E-39 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIT_02900 8f32d17fe43c52f157521672bbad822e 302 Gene3D G3DSA:3.40.190.10 60 280 1.6E-49 T 13-10-2018 RPIT_02900 8f32d17fe43c52f157521672bbad822e 302 SMART SM00062 63 290 1.2E-27 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIT_02900 8f32d17fe43c52f157521672bbad822e 302 Gene3D G3DSA:3.40.190.10 149 248 1.6E-49 T 13-10-2018 RPIT_02900 8f32d17fe43c52f157521672bbad822e 302 SUPERFAMILY SSF53850 4 289 1.09E-40 T 13-10-2018 RPIT_09990 f883a2a309f699cbc9ae7ae6dc5b7a06 603 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 339 590 5.0E-69 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B RPIT_09990 f883a2a309f699cbc9ae7ae6dc5b7a06 603 Gene3D G3DSA:2.40.100.10 485 597 2.7E-35 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily RPIT_09990 f883a2a309f699cbc9ae7ae6dc5b7a06 603 SMART SM00797 338 603 2.7E-72 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B RPIT_09990 f883a2a309f699cbc9ae7ae6dc5b7a06 603 SUPERFAMILY SSF50891 77 201 1.59E-42 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily RPIT_09990 f883a2a309f699cbc9ae7ae6dc5b7a06 603 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 1 188 1.0E-62 T 13-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D RPIT_09990 f883a2a309f699cbc9ae7ae6dc5b7a06 603 Gene3D G3DSA:2.40.100.10 71 200 2.2E-57 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily RPIT_09990 f883a2a309f699cbc9ae7ae6dc5b7a06 603 SUPERFAMILY SSF50891 501 589 8.72E-7 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily RPIT_09990 f883a2a309f699cbc9ae7ae6dc5b7a06 603 SMART SM00796 1 188 2.8E-82 T 13-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D RPIT_09990 f883a2a309f699cbc9ae7ae6dc5b7a06 603 Gene3D G3DSA:3.30.1360.40 1 70 6.2E-13 T 13-10-2018 RPIT_14725 093fe14fb05a9238a7ba6374e4158bb0 310 Gene3D G3DSA:1.10.3720.10 86 306 2.3E-22 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_14725 093fe14fb05a9238a7ba6374e4158bb0 310 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 20 76 7.0E-7 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RPIT_14725 093fe14fb05a9238a7ba6374e4158bb0 310 SUPERFAMILY SSF161098 94 272 2.49E-23 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_14725 093fe14fb05a9238a7ba6374e4158bb0 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 308 3.6E-27 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_14605 323b6abaa06d647be6cb0df5a7e913c3 278 SUPERFAMILY SSF56112 12 263 3.93E-33 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily RPIT_14605 323b6abaa06d647be6cb0df5a7e913c3 278 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 10 256 3.1E-109 T 13-10-2018 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 RPIT_03260 3669f0a7eb0b67ba33660ffcf2e240d3 459 Pfam PF01547 Bacterial extracellular solute-binding protein 71 373 1.5E-32 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein RPIT_03260 3669f0a7eb0b67ba33660ffcf2e240d3 459 Gene3D G3DSA:3.40.190.10 184 444 5.6E-81 T 13-10-2018 RPIT_03260 3669f0a7eb0b67ba33660ffcf2e240d3 459 SUPERFAMILY SSF53850 25 457 2.61E-73 T 13-10-2018 RPIT_03260 3669f0a7eb0b67ba33660ffcf2e240d3 459 Gene3D G3DSA:3.40.190.10 88 415 5.6E-81 T 13-10-2018 RPIT_05990 e490888826477a5343f60387c638f74f 496 SUPERFAMILY SSF56317 200 461 1.96E-23 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily RPIT_05990 e490888826477a5343f60387c638f74f 496 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 1 477 14.913 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 RPIT_05990 e490888826477a5343f60387c638f74f 496 Gene3D G3DSA:3.60.110.10 189 452 5.0E-8 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily RPIT_05990 e490888826477a5343f60387c638f74f 496 Pfam PF00795 Carbon-nitrogen hydrolase 202 419 1.2E-9 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 RPIT_05990 e490888826477a5343f60387c638f74f 496 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 55 439 2.1E-61 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 RPIT_11590 d188c0871ae37fcf4cc166a1875d8b09 260 SUPERFAMILY SSF140478 29 183 3.53E-50 T 13-10-2018 IPR023353 LemA-like domain superfamily RPIT_11590 d188c0871ae37fcf4cc166a1875d8b09 260 Pfam PF04011 LemA family 9 194 5.7E-66 T 13-10-2018 IPR007156 LemA RPIT_11590 d188c0871ae37fcf4cc166a1875d8b09 260 Gene3D G3DSA:1.20.1440.20 20 194 1.7E-60 T 13-10-2018 IPR023353 LemA-like domain superfamily RPIT_12595 06000b441a9fa4767f749f61ca9d981a 727 Pfam PF01642 Methylmalonyl-CoA mutase 38 556 2.6E-230 T 13-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 RPIT_12595 06000b441a9fa4767f749f61ca9d981a 727 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 37 563 2.9E-279 T 13-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 RPIT_12595 06000b441a9fa4767f749f61ca9d981a 727 Pfam PF02310 B12 binding domain 598 708 2.3E-14 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 RPIT_12595 06000b441a9fa4767f749f61ca9d981a 727 SUPERFAMILY SSF51703 26 558 9.22E-217 T 13-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 RPIT_12595 06000b441a9fa4767f749f61ca9d981a 727 Gene3D G3DSA:3.20.20.240 37 558 8.2E-243 T 13-10-2018 RPIT_12595 06000b441a9fa4767f749f61ca9d981a 727 Gene3D G3DSA:3.40.50.280 562 725 1.8E-55 T 13-10-2018 RPIT_12595 06000b441a9fa4767f749f61ca9d981a 727 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 380 405 - T 13-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 RPIT_12595 06000b441a9fa4767f749f61ca9d981a 727 SUPERFAMILY SSF52242 561 724 2.22E-59 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 RPIT_12595 06000b441a9fa4767f749f61ca9d981a 727 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 595 724 1.9E-61 T 13-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 RPIT_06200 fc18d5be10c33d5cc0dedf6510ddceae 638 ProSitePatterns PS01303 BCCT family of transporters signature. 339 348 - T 13-10-2018 IPR018093 BCCT transporter, conserved site RPIT_06200 fc18d5be10c33d5cc0dedf6510ddceae 638 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 72 527 3.7E-137 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 RPIT_06200 fc18d5be10c33d5cc0dedf6510ddceae 638 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 36 527 6.8E-159 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 RPIT_04305 7d5a259eae73241f8fa43c05061c502a 441 Pfam PF16268 Domain of unknown function (DUF4921) 14 439 5.3E-205 T 13-10-2018 IPR032576 Domain of unknown function DUF4921 RPIT_04305 7d5a259eae73241f8fa43c05061c502a 441 SUPERFAMILY SSF54197 21 262 1.77E-19 T 13-10-2018 IPR036265 HIT-like superfamily RPIT_04305 7d5a259eae73241f8fa43c05061c502a 441 Gene3D G3DSA:3.30.428.10 230 413 2.8E-17 T 13-10-2018 IPR036265 HIT-like superfamily RPIT_07385 a768522393d183975140a8ded94f889a 423 Pfam PF13635 Domain of unknown function (DUF4143) 207 371 2.9E-18 T 13-10-2018 IPR025420 Domain of unknown function DUF4143 RPIT_07385 a768522393d183975140a8ded94f889a 423 SUPERFAMILY SSF52540 20 131 6.91E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_07385 a768522393d183975140a8ded94f889a 423 Pfam PF13173 AAA domain 21 130 8.5E-12 T 13-10-2018 RPIT_09275 3b36b15415e00b08eb2752128a4a91e6 117 SUPERFAMILY SSF46785 4 112 4.01E-29 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_09275 3b36b15415e00b08eb2752128a4a91e6 117 Gene3D G3DSA:1.10.10.10 1 113 4.9E-39 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_09275 3b36b15415e00b08eb2752128a4a91e6 117 Pfam PF01638 HxlR-like helix-turn-helix 14 101 1.8E-25 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type RPIT_04705 da6d3bff24a943fef51fb64144fb0bd7 221 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 9 196 2.6E-51 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_04705 da6d3bff24a943fef51fb64144fb0bd7 221 SMART SM00855 8 160 7.2E-21 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_04705 da6d3bff24a943fef51fb64144fb0bd7 221 PIRSF PIRSF000709 3 168 5.9E-13 T 13-10-2018 RPIT_04705 da6d3bff24a943fef51fb64144fb0bd7 221 Gene3D G3DSA:3.40.50.1240 6 202 3.4E-52 T 13-10-2018 IPR029033 Histidine phosphatase superfamily RPIT_04705 da6d3bff24a943fef51fb64144fb0bd7 221 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 11 20 - T 13-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 RPIT_04705 da6d3bff24a943fef51fb64144fb0bd7 221 SUPERFAMILY SSF53254 7 198 1.44E-50 T 13-10-2018 IPR029033 Histidine phosphatase superfamily RPIT_01975 6dddb16d556c5e32956c8da6df2ad7be 291 ProSitePatterns PS01058 SAICAR synthetase signature 2. 193 201 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RPIT_01975 6dddb16d556c5e32956c8da6df2ad7be 291 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 15 284 1.2E-66 T 13-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 RPIT_01975 6dddb16d556c5e32956c8da6df2ad7be 291 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 10 284 25.202 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RPIT_01975 6dddb16d556c5e32956c8da6df2ad7be 291 Gene3D G3DSA:3.30.200.20 1 92 2.5E-27 T 13-10-2018 RPIT_01975 6dddb16d556c5e32956c8da6df2ad7be 291 SUPERFAMILY SSF56104 6 287 2.06E-98 T 13-10-2018 RPIT_01975 6dddb16d556c5e32956c8da6df2ad7be 291 Gene3D G3DSA:3.30.470.20 93 237 1.1E-58 T 13-10-2018 RPIT_01975 6dddb16d556c5e32956c8da6df2ad7be 291 Pfam PF01259 SAICAR synthetase 14 256 5.0E-98 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RPIT_13150 11a1457ec6209b91c7492ced276fe8ee 257 Pfam PF00230 Major intrinsic protein 9 250 3.5E-34 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 RPIT_13150 11a1457ec6209b91c7492ced276fe8ee 257 Gene3D G3DSA:1.20.1080.10 5 255 6.7E-63 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 RPIT_13150 11a1457ec6209b91c7492ced276fe8ee 257 ProSitePatterns PS00221 MIP family signature. 67 75 - T 13-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 RPIT_13150 11a1457ec6209b91c7492ced276fe8ee 257 SUPERFAMILY SSF81338 9 254 4.45E-54 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 RPIT_13150 11a1457ec6209b91c7492ced276fe8ee 257 PRINTS PR00783 Major intrinsic protein family signature 234 254 7.9E-31 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 RPIT_13150 11a1457ec6209b91c7492ced276fe8ee 257 PRINTS PR00783 Major intrinsic protein family signature 8 27 7.9E-31 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 RPIT_13150 11a1457ec6209b91c7492ced276fe8ee 257 PRINTS PR00783 Major intrinsic protein family signature 94 113 7.9E-31 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 RPIT_13150 11a1457ec6209b91c7492ced276fe8ee 257 PRINTS PR00783 Major intrinsic protein family signature 149 167 7.9E-31 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 RPIT_13150 11a1457ec6209b91c7492ced276fe8ee 257 PRINTS PR00783 Major intrinsic protein family signature 187 209 7.9E-31 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 RPIT_00935 9bea28810c770432ffe560d82918756e 224 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 77 218 6.7E-21 T 13-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 RPIT_00935 9bea28810c770432ffe560d82918756e 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 66 6.9E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_00935 9bea28810c770432ffe560d82918756e 224 Gene3D G3DSA:1.10.10.60 10 71 6.8E-28 T 13-10-2018 RPIT_00935 9bea28810c770432ffe560d82918756e 224 PRINTS PR00400 Tetracycline repressor protein signature 32 55 9.4E-8 T 13-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 RPIT_00935 9bea28810c770432ffe560d82918756e 224 PRINTS PR00400 Tetracycline repressor protein signature 83 102 9.4E-8 T 13-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 RPIT_00935 9bea28810c770432ffe560d82918756e 224 PRINTS PR00400 Tetracycline repressor protein signature 203 217 9.4E-8 T 13-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 RPIT_00935 9bea28810c770432ffe560d82918756e 224 Gene3D G3DSA:1.10.357.10 72 222 2.2E-38 T 13-10-2018 RPIT_00935 9bea28810c770432ffe560d82918756e 224 SUPERFAMILY SSF46689 13 74 6.67E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_00935 9bea28810c770432ffe560d82918756e 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 8.5E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_00935 9bea28810c770432ffe560d82918756e 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 8.5E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_00935 9bea28810c770432ffe560d82918756e 224 SUPERFAMILY SSF48498 82 220 7.67E-34 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RPIT_12425 c5692df549940bf61e2033378c95d559 253 SUPERFAMILY SSF46785 9 76 2.8E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_12425 c5692df549940bf61e2033378c95d559 253 Pfam PF07729 FCD domain 101 222 7.4E-14 T 13-10-2018 IPR011711 GntR, C-terminal RPIT_12425 c5692df549940bf61e2033378c95d559 253 Gene3D G3DSA:1.20.120.530 97 231 7.2E-16 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIT_12425 c5692df549940bf61e2033378c95d559 253 Gene3D G3DSA:1.10.10.10 9 78 4.9E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_12425 c5692df549940bf61e2033378c95d559 253 SMART SM00895 101 224 2.1E-5 T 13-10-2018 IPR011711 GntR, C-terminal RPIT_12425 c5692df549940bf61e2033378c95d559 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.6E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_12425 c5692df549940bf61e2033378c95d559 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.6E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_12425 c5692df549940bf61e2033378c95d559 253 SUPERFAMILY SSF48008 97 229 7.32E-16 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIT_12425 c5692df549940bf61e2033378c95d559 253 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 72 6.4E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_12425 c5692df549940bf61e2033378c95d559 253 SMART SM00345 13 72 1.6E-13 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_01705 4c4247bfac4db504ff1edda9abc93d98 220 SUPERFAMILY SSF53254 9 196 2.88E-36 T 13-10-2018 IPR029033 Histidine phosphatase superfamily RPIT_01705 4c4247bfac4db504ff1edda9abc93d98 220 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 10 196 8.8E-32 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_01705 4c4247bfac4db504ff1edda9abc93d98 220 SMART SM00855 8 162 3.8E-18 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_01705 4c4247bfac4db504ff1edda9abc93d98 220 Gene3D G3DSA:3.40.50.1240 2 202 1.8E-30 T 13-10-2018 IPR029033 Histidine phosphatase superfamily RPIT_07110 0ecfdbc43511d4ab0060226ec9153905 197 Gene3D G3DSA:1.20.120.1760 12 196 4.5E-16 T 13-10-2018 RPIT_07110 0ecfdbc43511d4ab0060226ec9153905 197 PIRSF PIRSF000847 10 197 1.0E-49 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 RPIT_07110 0ecfdbc43511d4ab0060226ec9153905 197 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 14 187 8.7E-40 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 RPIT_07110 0ecfdbc43511d4ab0060226ec9153905 197 Pfam PF01066 CDP-alcohol phosphatidyltransferase 14 83 1.5E-16 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RPIT_07110 0ecfdbc43511d4ab0060226ec9153905 197 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 61 83 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RPIT_03625 782874fdb8aef4bcf557c677aeed7e60 294 Pfam PF02595 Glycerate kinase family 105 271 4.5E-18 T 13-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RPIT_03625 782874fdb8aef4bcf557c677aeed7e60 294 Gene3D G3DSA:3.90.1510.10 123 201 3.0E-16 T 13-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 RPIT_03625 782874fdb8aef4bcf557c677aeed7e60 294 SUPERFAMILY SSF110738 14 269 3.53E-17 T 13-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 RPIT_03625 782874fdb8aef4bcf557c677aeed7e60 294 Gene3D G3DSA:3.40.50.10350 202 270 3.0E-16 T 13-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold RPIT_02055 a159d2c1f6115dcd3e9f9cf828320c81 306 Pfam PF03060 Nitronate monooxygenase 87 241 2.2E-22 T 13-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RPIT_02055 a159d2c1f6115dcd3e9f9cf828320c81 306 Gene3D G3DSA:3.20.20.70 9 302 8.2E-70 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_02055 a159d2c1f6115dcd3e9f9cf828320c81 306 SUPERFAMILY SSF51412 10 288 1.5E-52 T 13-10-2018 RPIT_14325 fbed097cd679c50ba464542fdb55b265 295 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 6 271 49.293 T 13-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein RPIT_14325 fbed097cd679c50ba464542fdb55b265 295 SUPERFAMILY SSF52540 149 272 7.71E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_14325 fbed097cd679c50ba464542fdb55b265 295 Pfam PF03618 Kinase/pyrophosphorylase 8 265 7.2E-78 T 13-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 RPIT_06040 68c13ef9491b527134e119e5cda2f32d 135 Gene3D G3DSA:1.20.1270.360 21 133 2.6E-29 T 13-10-2018 RPIT_06640 ed2fe70a285436c8594e4d1ea3ec4aff 94 Gene3D G3DSA:3.40.1440.10 2 93 5.4E-28 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 RPIT_06640 ed2fe70a285436c8594e4d1ea3ec4aff 94 Pfam PF01541 GIY-YIG catalytic domain 3 73 1.7E-13 T 13-10-2018 IPR000305 GIY-YIG endonuclease RPIT_06640 ed2fe70a285436c8594e4d1ea3ec4aff 94 SUPERFAMILY SSF82771 1 72 7.85E-14 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 RPIT_00320 58454c506a3cda98193ba632c0f79975 227 Pfam PF03591 AzlC protein 18 154 9.0E-32 T 13-10-2018 IPR011606 Branched-chain amino acid transport, permease RPIT_12245 9925767a87df75aa55d4050d856de909 274 SUPERFAMILY SSF52980 126 237 6.97E-17 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RPIT_12245 9925767a87df75aa55d4050d856de909 274 SMART SM00891 125 205 4.7E-15 T 13-10-2018 IPR006166 ERCC4 domain GO:0003677|GO:0004518 Reactome: R-HSA-6783310 RPIT_12245 9925767a87df75aa55d4050d856de909 274 Pfam PF02732 ERCC4 domain 128 249 3.3E-10 T 13-10-2018 IPR006166 ERCC4 domain GO:0003677|GO:0004518 Reactome: R-HSA-6783310 RPIT_12245 9925767a87df75aa55d4050d856de909 274 Gene3D G3DSA:3.40.50.10130 121 262 2.2E-16 T 13-10-2018 RPIT_06170 8f5e9843f2acfc55f2ba8d4a3b31c943 270 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 5 254 2.3E-72 T 13-10-2018 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RPIT_06170 8f5e9843f2acfc55f2ba8d4a3b31c943 270 Gene3D G3DSA:3.20.20.70 3 268 8.4E-79 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_06170 8f5e9843f2acfc55f2ba8d4a3b31c943 270 SMART SM00934 17 260 1.3E-22 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RPIT_06170 8f5e9843f2acfc55f2ba8d4a3b31c943 270 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 17 252 7.3E-30 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RPIT_06170 8f5e9843f2acfc55f2ba8d4a3b31c943 270 SUPERFAMILY SSF51366 8 251 1.55E-54 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 RPIT_12725 44067215597df91fc9dffcc7c1449dc1 94 Hamap MF_00631 Cell division protein CrgA [crgA]. 1 94 16.801 T 13-10-2018 IPR009619 Cell division protein CrgA RPIT_12725 44067215597df91fc9dffcc7c1449dc1 94 Pfam PF06781 Cell division protein CrgA 2 94 2.0E-23 T 13-10-2018 IPR009619 Cell division protein CrgA RPIT_01695 fd5be5e240b6c4b4c65ff610503e7ab6 104 Gene3D G3DSA:3.40.30.10 2 80 2.9E-19 T 13-10-2018 RPIT_01695 fd5be5e240b6c4b4c65ff610503e7ab6 104 SUPERFAMILY SSF52833 4 81 1.3E-15 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_01695 fd5be5e240b6c4b4c65ff610503e7ab6 104 Pfam PF05768 Glutaredoxin-like domain (DUF836) 7 79 4.5E-13 T 13-10-2018 IPR008554 Glutaredoxin-like RPIT_13980 4e813d620d42118d3e7a9f9c0b5d91c9 175 SMART SM00226 1 170 5.1E-10 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I RPIT_13980 4e813d620d42118d3e7a9f9c0b5d91c9 175 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 1 17 4.6E-7 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RPIT_13980 4e813d620d42118d3e7a9f9c0b5d91c9 175 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 71 86 4.6E-7 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RPIT_13980 4e813d620d42118d3e7a9f9c0b5d91c9 175 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 38 54 4.6E-7 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RPIT_13980 4e813d620d42118d3e7a9f9c0b5d91c9 175 Gene3D G3DSA:3.40.50.2300 1 169 4.7E-36 T 13-10-2018 RPIT_13980 4e813d620d42118d3e7a9f9c0b5d91c9 175 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 1 103 3.1E-17 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I RPIT_13980 4e813d620d42118d3e7a9f9c0b5d91c9 175 SUPERFAMILY SSF52788 1 163 1.7E-28 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily RPIT_05965 e2b683bb562fecc6b05ce755b233ba60 280 SUPERFAMILY SSF53613 1 276 1.53E-65 T 13-10-2018 IPR029056 Ribokinase-like RPIT_05965 e2b683bb562fecc6b05ce755b233ba60 280 Pfam PF08543 Phosphomethylpyrimidine kinase 73 256 5.7E-14 T 13-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 RPIT_05965 e2b683bb562fecc6b05ce755b233ba60 280 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 277 2.3E-91 T 13-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 RPIT_05965 e2b683bb562fecc6b05ce755b233ba60 280 Gene3D G3DSA:3.40.1190.20 1 280 1.8E-83 T 13-10-2018 IPR029056 Ribokinase-like RPIT_02635 990ef137a4a537e7fa40bf229dc28a6e 184 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 41.167 T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02635 990ef137a4a537e7fa40bf229dc28a6e 184 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 2.4E-24 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02635 990ef137a4a537e7fa40bf229dc28a6e 184 SUPERFAMILY SSF56770 9 153 7.59E-65 T 13-10-2018 RPIT_02635 990ef137a4a537e7fa40bf229dc28a6e 184 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02635 990ef137a4a537e7fa40bf229dc28a6e 184 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 3.2E-66 T 13-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02635 990ef137a4a537e7fa40bf229dc28a6e 184 Gene3D G3DSA:3.40.50.12280 2 171 3.0E-71 T 13-10-2018 RPIT_03950 c73b577206815744ea5db709038a510a 1262 SMART SM00481 6 73 2.0E-16 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal RPIT_03950 c73b577206815744ea5db709038a510a 1262 Pfam PF14579 Helix-hairpin-helix motif 822 925 1.8E-16 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_03950 c73b577206815744ea5db709038a510a 1262 Pfam PF02811 PHP domain 7 139 1.3E-16 T 13-10-2018 IPR004013 PHP domain GO:0003824 RPIT_03950 c73b577206815744ea5db709038a510a 1262 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 324 742 2.8E-116 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_03950 c73b577206815744ea5db709038a510a 1262 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1107 3.7E-173 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_03950 c73b577206815744ea5db709038a510a 1262 Gene3D G3DSA:3.20.20.140 1 295 2.9E-57 T 13-10-2018 RPIT_03950 c73b577206815744ea5db709038a510a 1262 Gene3D G3DSA:1.10.10.1600 458 530 1.1E-6 T 13-10-2018 RPIT_02145 e5f96b735a9220c60105660b589c43fa 252 Gene3D G3DSA:1.20.950.20 1 216 1.4E-74 T 13-10-2018 RPIT_02145 e5f96b735a9220c60105660b589c43fa 252 Pfam PF02665 Nitrate reductase gamma subunit 2 224 8.4E-84 T 13-10-2018 IPR023234 NarG-like domain RPIT_02145 e5f96b735a9220c60105660b589c43fa 252 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 2 224 5.0E-56 T 13-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 RPIT_02145 e5f96b735a9220c60105660b589c43fa 252 SUPERFAMILY SSF103501 1 224 1.7E-64 T 13-10-2018 IPR036197 NarG-like superfamily RPIT_03520 af498edcfaccf9b106f4efba667484b5 327 Gene3D G3DSA:3.40.190.10 114 220 2.8E-46 T 13-10-2018 RPIT_03520 af498edcfaccf9b106f4efba667484b5 327 Gene3D G3DSA:3.40.190.10 35 310 2.8E-46 T 13-10-2018 RPIT_03520 af498edcfaccf9b106f4efba667484b5 327 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 24 2.5E-5 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RPIT_03520 af498edcfaccf9b106f4efba667484b5 327 Pfam PF09084 NMT1/THI5 like 42 257 9.4E-26 T 13-10-2018 IPR015168 SsuA/THI5-like RPIT_03520 af498edcfaccf9b106f4efba667484b5 327 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 25 5.2E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RPIT_03520 af498edcfaccf9b106f4efba667484b5 327 SUPERFAMILY SSF53850 32 256 1.29E-22 T 13-10-2018 RPIT_02770 a9cbc2be2756f7ac1e63f4dee3fcd117 163 Pfam PF04461 Protein of unknown function (DUF520) 5 163 1.1E-59 T 13-10-2018 IPR007551 Protein of unknown function DUF520 RPIT_02770 a9cbc2be2756f7ac1e63f4dee3fcd117 163 SUPERFAMILY SSF89963 6 88 1.44E-27 T 13-10-2018 IPR036183 YajQ-like superfamily RPIT_02770 a9cbc2be2756f7ac1e63f4dee3fcd117 163 Gene3D G3DSA:3.30.70.860 6 163 3.8E-58 T 13-10-2018 IPR035571 UPF0234-like, C-terminal RPIT_02770 a9cbc2be2756f7ac1e63f4dee3fcd117 163 SUPERFAMILY SSF89963 92 163 1.57E-22 T 13-10-2018 IPR036183 YajQ-like superfamily RPIT_02770 a9cbc2be2756f7ac1e63f4dee3fcd117 163 Gene3D G3DSA:3.30.70.990 12 100 3.8E-58 T 13-10-2018 IPR035570 UPF0234, N-terminal RPIT_02770 a9cbc2be2756f7ac1e63f4dee3fcd117 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 163 25.122 T 13-10-2018 IPR007551 Protein of unknown function DUF520 RPIT_05885 fbf2f1beab97992e6567a866e6e1256b 240 SMART SM00382 26 205 5.1E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_05885 fbf2f1beab97992e6567a866e6e1256b 240 Pfam PF00005 ABC transporter 18 157 1.3E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_05885 fbf2f1beab97992e6567a866e6e1256b 240 SUPERFAMILY SSF52540 2 219 5.86E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_05885 fbf2f1beab97992e6567a866e6e1256b 240 Gene3D G3DSA:3.40.50.300 1 239 4.6E-59 T 13-10-2018 RPIT_06395 dac7f7f6000f675d8c903e4cc710322d 362 Gene3D G3DSA:3.40.190.10 55 325 4.5E-100 T 13-10-2018 RPIT_06395 dac7f7f6000f675d8c903e4cc710322d 362 Gene3D G3DSA:3.40.190.10 151 339 4.5E-100 T 13-10-2018 RPIT_06395 dac7f7f6000f675d8c903e4cc710322d 362 Pfam PF13343 Bacterial extracellular solute-binding protein 114 309 4.4E-28 T 13-10-2018 RPIT_06395 dac7f7f6000f675d8c903e4cc710322d 362 SUPERFAMILY SSF53850 47 353 4.74E-68 T 13-10-2018 RPIT_06395 dac7f7f6000f675d8c903e4cc710322d 362 PIRSF PIRSF002825 2 356 6.1E-67 T 13-10-2018 IPR026045 Ferric binding protein RPIT_00645 c92699b762e222a8f941a271aaa01323 527 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 13 257 2.8E-12 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RPIT_00645 c92699b762e222a8f941a271aaa01323 527 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 273 469 3.8E-28 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RPIT_00645 c92699b762e222a8f941a271aaa01323 527 Gene3D G3DSA:3.30.420.40 8 261 2.2E-35 T 13-10-2018 RPIT_00645 c92699b762e222a8f941a271aaa01323 527 SUPERFAMILY SSF53067 271 513 5.61E-13 T 13-10-2018 RPIT_00645 c92699b762e222a8f941a271aaa01323 527 SUPERFAMILY SSF53067 13 260 5.51E-28 T 13-10-2018 RPIT_00645 c92699b762e222a8f941a271aaa01323 527 Gene3D G3DSA:3.30.420.40 262 523 8.1E-16 T 13-10-2018 RPIT_01105 b2b054d64aabee53c34c172de9c44c28 263 Gene3D G3DSA:3.40.50.1000 14 249 5.1E-77 T 13-10-2018 IPR023214 HAD superfamily RPIT_01105 b2b054d64aabee53c34c172de9c44c28 263 Pfam PF13242 HAD-hyrolase-like 186 259 7.2E-23 T 13-10-2018 RPIT_01105 b2b054d64aabee53c34c172de9c44c28 263 SUPERFAMILY SSF56784 11 261 1.32E-67 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_01105 b2b054d64aabee53c34c172de9c44c28 263 Gene3D G3DSA:3.40.50.1000 91 186 5.1E-77 T 13-10-2018 IPR023214 HAD superfamily RPIT_01105 b2b054d64aabee53c34c172de9c44c28 263 PIRSF PIRSF000915 2 263 6.3E-55 T 13-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA RPIT_01105 b2b054d64aabee53c34c172de9c44c28 263 Pfam PF13344 Haloacid dehalogenase-like hydrolase 14 113 3.8E-25 T 13-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA RPIT_01105 b2b054d64aabee53c34c172de9c44c28 263 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 15 235 5.8E-44 T 13-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA RPIT_04370 df5cb4c94c7b5349c50fb44f196c2668 126 Gene3D G3DSA:3.30.300.130 22 121 7.5E-31 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily RPIT_04370 df5cb4c94c7b5349c50fb44f196c2668 126 SUPERFAMILY SSF117916 26 120 1.93E-27 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily RPIT_04370 df5cb4c94c7b5349c50fb44f196c2668 126 Pfam PF01883 Iron-sulfur cluster assembly protein 28 92 4.2E-18 T 13-10-2018 IPR002744 MIP18 family-like RPIT_14395 fbaab72a14e6e65b3df94576469dcaac 569 Pfam PF02913 FAD linked oxidases, C-terminal domain 285 554 9.1E-32 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RPIT_14395 fbaab72a14e6e65b3df94576469dcaac 569 SUPERFAMILY SSF55103 293 557 2.29E-28 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RPIT_14395 fbaab72a14e6e65b3df94576469dcaac 569 Gene3D G3DSA:3.30.465.40 77 285 9.7E-145 T 13-10-2018 RPIT_14395 fbaab72a14e6e65b3df94576469dcaac 569 Gene3D G3DSA:3.40.462.40 89 511 9.7E-145 T 13-10-2018 RPIT_14395 fbaab72a14e6e65b3df94576469dcaac 569 SUPERFAMILY SSF56176 55 286 5.14E-44 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 RPIT_14395 fbaab72a14e6e65b3df94576469dcaac 569 Pfam PF01565 FAD binding domain 108 243 4.8E-34 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIT_02415 dbe1a0ea3a65bce69660654ab2cf937a 75 Pfam PF11273 Protein of unknown function (DUF3073) 2 70 1.0E-18 T 13-10-2018 IPR021426 Protein of unknown function DUF3073 RPIT_00070 3130e7571cf10391758d7921d18710a2 144 SUPERFAMILY SSF55816 5 127 7.72E-22 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RPIT_00070 3130e7571cf10391758d7921d18710a2 144 Pfam PF02872 5'-nucleotidase, C-terminal domain 35 98 7.5E-14 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RPIT_00070 3130e7571cf10391758d7921d18710a2 144 Gene3D G3DSA:3.90.780.10 3 131 2.2E-36 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RPIT_06335 fca571a02d4ace5871fc6bef192f4a12 257 SUPERFAMILY SSF75625 5 250 5.62E-82 T 13-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_06335 fca571a02d4ace5871fc6bef192f4a12 257 Gene3D G3DSA:3.30.70.980 86 242 2.3E-48 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_06335 fca571a02d4ace5871fc6bef192f4a12 257 Gene3D G3DSA:3.30.70.980 135 208 2.3E-48 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_06335 fca571a02d4ace5871fc6bef192f4a12 257 Gene3D G3DSA:1.10.10.200 1 80 2.9E-32 T 13-10-2018 IPR017856 Integrase-like, N-terminal RPIT_06335 fca571a02d4ace5871fc6bef192f4a12 257 Pfam PF01709 Transcriptional regulator 5 243 4.7E-86 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_06335 fca571a02d4ace5871fc6bef192f4a12 257 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 245 33.444 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_06335 fca571a02d4ace5871fc6bef192f4a12 257 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 243 1.9E-90 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_01475 fb0227b71e4b34429f3284446418ee98 383 SUPERFAMILY SSF52540 5 206 5.58E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01475 fb0227b71e4b34429f3284446418ee98 383 SUPERFAMILY SSF48019 299 381 6.12E-7 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 RPIT_01475 fb0227b71e4b34429f3284446418ee98 383 Pfam PF13177 DNA polymerase III, delta subunit 11 165 2.8E-37 T 13-10-2018 RPIT_01475 fb0227b71e4b34429f3284446418ee98 383 Gene3D G3DSA:3.40.50.300 2 165 3.8E-48 T 13-10-2018 RPIT_13950 015001309c082af562ac58a3b3a9614f 238 Gene3D G3DSA:2.60.40.10 53 137 2.6E-8 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_03075 a695012e0a60fe0c9e1fe3362bcb4915 139 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 1.6E-57 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03075 a695012e0a60fe0c9e1fe3362bcb4915 139 Gene3D G3DSA:3.90.1170.10 1 138 1.8E-51 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 RPIT_03075 a695012e0a60fe0c9e1fe3362bcb4915 139 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03075 a695012e0a60fe0c9e1fe3362bcb4915 139 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 39.694 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03075 a695012e0a60fe0c9e1fe3362bcb4915 139 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 5.9E-48 T 13-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RPIT_03075 a695012e0a60fe0c9e1fe3362bcb4915 139 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.2E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03075 a695012e0a60fe0c9e1fe3362bcb4915 139 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.2E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03075 a695012e0a60fe0c9e1fe3362bcb4915 139 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.2E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03075 a695012e0a60fe0c9e1fe3362bcb4915 139 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.2E-40 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03075 a695012e0a60fe0c9e1fe3362bcb4915 139 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03075 a695012e0a60fe0c9e1fe3362bcb4915 139 SUPERFAMILY SSF54686 1 135 1.05E-56 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 RPIT_09740 a4cc91f097b10075c63bbef922928a2a 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 1.5E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_09740 a4cc91f097b10075c63bbef922928a2a 204 Pfam PF00072 Response regulator receiver domain 4 113 3.5E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_09740 a4cc91f097b10075c63bbef922928a2a 204 Gene3D G3DSA:3.40.50.12740 2 203 5.4E-59 T 13-10-2018 RPIT_09740 a4cc91f097b10075c63bbef922928a2a 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_09740 a4cc91f097b10075c63bbef922928a2a 204 SMART SM00448 2 114 1.6E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_09740 a4cc91f097b10075c63bbef922928a2a 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 1.3E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_09740 a4cc91f097b10075c63bbef922928a2a 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 1.3E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_09740 a4cc91f097b10075c63bbef922928a2a 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 1.3E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_09740 a4cc91f097b10075c63bbef922928a2a 204 SMART SM00421 140 197 9.7E-25 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_09740 a4cc91f097b10075c63bbef922928a2a 204 SUPERFAMILY SSF46894 134 203 5.1E-23 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIT_09740 a4cc91f097b10075c63bbef922928a2a 204 SUPERFAMILY SSF52172 2 124 1.71E-26 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_07270 5c14db9bbbde664df28799c404d923a3 371 SUPERFAMILY SSF55874 193 363 1.57E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_07270 5c14db9bbbde664df28799c404d923a3 371 SUPERFAMILY SSF47384 123 204 2.16E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 RPIT_07270 5c14db9bbbde664df28799c404d923a3 371 Gene3D G3DSA:1.10.287.130 89 204 1.4E-23 T 13-10-2018 RPIT_07270 5c14db9bbbde664df28799c404d923a3 371 SUPERFAMILY SSF158472 85 135 1.83E-8 T 13-10-2018 RPIT_07270 5c14db9bbbde664df28799c404d923a3 371 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 248 359 4.1E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_07270 5c14db9bbbde664df28799c404d923a3 371 Pfam PF00512 His Kinase A (phospho-acceptor) domain 139 203 1.3E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIT_07270 5c14db9bbbde664df28799c404d923a3 371 Pfam PF00672 HAMP domain 85 133 5.9E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 RPIT_07270 5c14db9bbbde664df28799c404d923a3 371 SMART SM00304 85 138 8.2E-13 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 RPIT_07270 5c14db9bbbde664df28799c404d923a3 371 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 357 4.1E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_07270 5c14db9bbbde664df28799c404d923a3 371 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 298 4.1E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_07270 5c14db9bbbde664df28799c404d923a3 371 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 312 4.1E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_07270 5c14db9bbbde664df28799c404d923a3 371 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 337 4.1E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_07270 5c14db9bbbde664df28799c404d923a3 371 SMART SM00388 139 203 2.0E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIT_07270 5c14db9bbbde664df28799c404d923a3 371 Gene3D G3DSA:3.30.565.10 205 365 4.6E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_07270 5c14db9bbbde664df28799c404d923a3 371 SMART SM00387 247 360 3.6E-39 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_11965 bf1a7686899c3225655657fec36afd6b 100 Gene3D G3DSA:3.40.1190.20 1 61 1.8E-5 T 13-10-2018 IPR029056 Ribokinase-like RPIT_11965 bf1a7686899c3225655657fec36afd6b 100 SUPERFAMILY SSF53613 2 50 1.33E-6 T 13-10-2018 IPR029056 Ribokinase-like RPIT_09940 838b8722766d394305bfaf9b40a816b2 133 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 59 83 - T 13-10-2018 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 RPIT_09940 838b8722766d394305bfaf9b40a816b2 133 SUPERFAMILY SSF46458 11 131 1.01E-33 T 13-10-2018 IPR009050 Globin-like superfamily RPIT_09940 838b8722766d394305bfaf9b40a816b2 133 Pfam PF01152 Bacterial-like globin 13 122 1.0E-32 T 13-10-2018 IPR001486 Truncated hemoglobin GO:0019825 RPIT_09940 838b8722766d394305bfaf9b40a816b2 133 Gene3D G3DSA:1.10.490.10 9 133 4.6E-44 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 RPIT_14405 b9f151b10d69afd9a9ec328adc646947 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 4.2E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_14405 b9f151b10d69afd9a9ec328adc646947 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 4.2E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_14405 b9f151b10d69afd9a9ec328adc646947 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.2E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_14405 b9f151b10d69afd9a9ec328adc646947 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.2E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_14405 b9f151b10d69afd9a9ec328adc646947 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 4.2E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_14405 b9f151b10d69afd9a9ec328adc646947 258 Pfam PF00106 short chain dehydrogenase 4 188 3.0E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_14405 b9f151b10d69afd9a9ec328adc646947 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 184 0.0095 T 13-10-2018 RPIT_14405 b9f151b10d69afd9a9ec328adc646947 258 Gene3D G3DSA:3.40.50.720 2 257 8.7E-56 T 13-10-2018 RPIT_14405 b9f151b10d69afd9a9ec328adc646947 258 PIRSF PIRSF000126 1 258 4.5E-57 T 13-10-2018 RPIT_14405 b9f151b10d69afd9a9ec328adc646947 258 SUPERFAMILY SSF51735 4 249 7.71E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_14405 b9f151b10d69afd9a9ec328adc646947 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 6.4E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_14405 b9f151b10d69afd9a9ec328adc646947 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.4E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_14405 b9f151b10d69afd9a9ec328adc646947 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 6.4E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_07450 f9d8d46489952b966679923802f4a422 415 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 22 65 3.0E-8 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RPIT_07450 f9d8d46489952b966679923802f4a422 415 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 76 125 7.8E-9 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain RPIT_07450 f9d8d46489952b966679923802f4a422 415 Pfam PF01610 Transposase 144 406 4.7E-58 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RPIT_06500 9007f450276459bb88601a188fdfb9f5 467 SUPERFAMILY SSF52129 16 242 4.4E-8 T 13-10-2018 IPR029030 Caspase-like domain superfamily RPIT_06500 9007f450276459bb88601a188fdfb9f5 467 Pfam PF00656 Caspase domain 16 271 4.8E-26 T 13-10-2018 RPIT_06500 9007f450276459bb88601a188fdfb9f5 467 Gene3D G3DSA:3.40.50.1460 2 291 1.9E-68 T 13-10-2018 RPIT_06500 9007f450276459bb88601a188fdfb9f5 467 SUPERFAMILY SSF47090 308 373 4.45E-21 T 13-10-2018 IPR036365 PGBD-like superfamily RPIT_06500 9007f450276459bb88601a188fdfb9f5 467 Pfam PF01471 Putative peptidoglycan binding domain 318 373 2.3E-18 T 13-10-2018 IPR002477 Peptidoglycan binding-like RPIT_06500 9007f450276459bb88601a188fdfb9f5 467 Pfam PF01471 Putative peptidoglycan binding domain 412 466 2.2E-19 T 13-10-2018 IPR002477 Peptidoglycan binding-like RPIT_06500 9007f450276459bb88601a188fdfb9f5 467 Gene3D G3DSA:1.10.101.10 305 376 1.7E-26 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 RPIT_06500 9007f450276459bb88601a188fdfb9f5 467 Gene3D G3DSA:1.10.101.10 396 467 2.8E-27 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 RPIT_06500 9007f450276459bb88601a188fdfb9f5 467 SUPERFAMILY SSF47090 399 466 5.49E-22 T 13-10-2018 IPR036365 PGBD-like superfamily RPIT_13555 b43d24e6212a5262ba7ad06a9dca2f21 237 Pfam PF02104 SURF1 family 16 206 3.2E-19 T 13-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_14080 655012761fc367e55d4de8c7269b5d00 474 SUPERFAMILY SSF103473 25 434 2.49E-31 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_14080 655012761fc367e55d4de8c7269b5d00 474 Pfam PF07690 Major Facilitator Superfamily 24 370 5.2E-23 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIT_14080 655012761fc367e55d4de8c7269b5d00 474 Gene3D G3DSA:1.20.1250.20 20 388 4.6E-30 T 13-10-2018 RPIT_03905 9a1b690ed1718da5062c23e5d6f332d1 371 Pfam PF01636 Phosphotransferase enzyme family 159 327 2.9E-15 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase RPIT_03905 9a1b690ed1718da5062c23e5d6f332d1 371 Gene3D G3DSA:3.90.1200.10 179 367 8.3E-10 T 13-10-2018 RPIT_03905 9a1b690ed1718da5062c23e5d6f332d1 371 SUPERFAMILY SSF56112 151 324 2.17E-18 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily RPIT_07795 311be431511d4411ce2a779d3cff958e 142 Gene3D G3DSA:1.10.10.10 78 142 8.1E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_07795 311be431511d4411ce2a779d3cff958e 142 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 102 118 7.0E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_07795 311be431511d4411ce2a779d3cff958e 142 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 88 102 7.0E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_07795 311be431511d4411ce2a779d3cff958e 142 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 118 130 7.0E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_07795 311be431511d4411ce2a779d3cff958e 142 SUPERFAMILY SSF55729 5 67 8.3E-7 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_07795 311be431511d4411ce2a779d3cff958e 142 SUPERFAMILY SSF46894 76 141 2.31E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIT_07795 311be431511d4411ce2a779d3cff958e 142 Gene3D G3DSA:3.40.630.30 2 77 1.4E-8 T 13-10-2018 RPIT_07795 311be431511d4411ce2a779d3cff958e 142 Pfam PF00196 Bacterial regulatory proteins, luxR family 87 140 2.1E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_07795 311be431511d4411ce2a779d3cff958e 142 SMART SM00421 85 142 2.7E-21 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_12355 4fca861f89b145eb1bbf3d407a075c08 207 Pfam PF01081 KDPG and KHG aldolase 16 174 1.2E-11 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 RPIT_12355 4fca861f89b145eb1bbf3d407a075c08 207 SUPERFAMILY SSF51569 7 179 1.78E-23 T 13-10-2018 RPIT_12355 4fca861f89b145eb1bbf3d407a075c08 207 Gene3D G3DSA:3.20.20.70 5 205 3.2E-29 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_07155 6e134bea24f19e9b2dc984ba8195722a 212 PIRSF PIRSF028451 4 211 1.1E-34 T 13-10-2018 IPR015996 Uncharacterised conserved protein UCP028451 RPIT_07155 6e134bea24f19e9b2dc984ba8195722a 212 Pfam PF09365 Conserved hypothetical protein (DUF2461) 10 204 2.9E-48 T 13-10-2018 IPR012808 Conserved hypothetical protein CHP02453 RPIT_07155 6e134bea24f19e9b2dc984ba8195722a 212 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 10 208 9.8E-41 T 13-10-2018 IPR012808 Conserved hypothetical protein CHP02453 RPIT_11660 ddd4600d08de54d5f2eed7cd3a83ce2f 378 Gene3D G3DSA:1.10.441.10 150 296 7.5E-99 T 13-10-2018 RPIT_11660 ddd4600d08de54d5f2eed7cd3a83ce2f 378 PIRSF PIRSF001480 1 339 9.5E-67 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11660 ddd4600d08de54d5f2eed7cd3a83ce2f 378 Gene3D G3DSA:2.60.120.10 297 321 7.5E-99 T 13-10-2018 IPR014710 RmlC-like jelly roll fold RPIT_11660 ddd4600d08de54d5f2eed7cd3a83ce2f 378 SUPERFAMILY SSF51182 1 321 5.11E-67 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily RPIT_11660 ddd4600d08de54d5f2eed7cd3a83ce2f 378 Gene3D G3DSA:2.60.120.10 6 273 7.5E-99 T 13-10-2018 IPR014710 RmlC-like jelly roll fold RPIT_11660 ddd4600d08de54d5f2eed7cd3a83ce2f 378 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 4 292 6.9E-55 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11660 ddd4600d08de54d5f2eed7cd3a83ce2f 378 PRINTS PR00714 Phosphomannose isomerase type I signature 31 46 4.8E-50 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11660 ddd4600d08de54d5f2eed7cd3a83ce2f 378 PRINTS PR00714 Phosphomannose isomerase type I signature 253 272 4.8E-50 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11660 ddd4600d08de54d5f2eed7cd3a83ce2f 378 PRINTS PR00714 Phosphomannose isomerase type I signature 234 253 4.8E-50 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11660 ddd4600d08de54d5f2eed7cd3a83ce2f 378 PRINTS PR00714 Phosphomannose isomerase type I signature 218 233 4.8E-50 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11660 ddd4600d08de54d5f2eed7cd3a83ce2f 378 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 4.8E-50 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11660 ddd4600d08de54d5f2eed7cd3a83ce2f 378 PRINTS PR00714 Phosphomannose isomerase type I signature 272 291 4.8E-50 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11660 ddd4600d08de54d5f2eed7cd3a83ce2f 378 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 4.8E-50 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11660 ddd4600d08de54d5f2eed7cd3a83ce2f 378 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 4.8E-50 T 13-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11660 ddd4600d08de54d5f2eed7cd3a83ce2f 378 Pfam PF01238 Phosphomannose isomerase type I 210 290 4.6E-22 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_11660 ddd4600d08de54d5f2eed7cd3a83ce2f 378 Pfam PF01238 Phosphomannose isomerase type I 3 152 4.4E-26 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 RPIT_14760 62bc9bee8c8e1eb725108be5ccedbd84 80 TIGRFAM TIGR00412 redox_disulf_2: redox-active disulfide protein 2 1 76 4.7E-24 T 13-10-2018 IPR005243 Redox-active disulphide protein 2 RPIT_14760 62bc9bee8c8e1eb725108be5ccedbd84 80 PIRSF PIRSF037031 1 77 3.8E-29 T 13-10-2018 IPR005243 Redox-active disulphide protein 2 RPIT_14760 62bc9bee8c8e1eb725108be5ccedbd84 80 Gene3D G3DSA:3.40.30.10 1 75 1.8E-28 T 13-10-2018 RPIT_14760 62bc9bee8c8e1eb725108be5ccedbd84 80 SUPERFAMILY SSF52833 2 75 1.35E-17 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_14760 62bc9bee8c8e1eb725108be5ccedbd84 80 Pfam PF13192 Thioredoxin domain 1 75 3.2E-26 T 13-10-2018 IPR012336 Thioredoxin-like fold RPIT_04525 31cf7701022580ff0fae6d41ed004c96 445 Gene3D G3DSA:1.10.285.10 6 381 9.9E-169 T 13-10-2018 RPIT_04525 31cf7701022580ff0fae6d41ed004c96 445 PIRSF PIRSF000185 20 445 3.5E-116 T 13-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 RPIT_04525 31cf7701022580ff0fae6d41ed004c96 445 SUPERFAMILY SSF51735 201 444 9.46E-73 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_04525 31cf7701022580ff0fae6d41ed004c96 445 Gene3D G3DSA:3.40.50.10860 53 188 9.9E-169 T 13-10-2018 RPIT_04525 31cf7701022580ff0fae6d41ed004c96 445 Gene3D G3DSA:1.10.285.10 393 445 4.7E-5 T 13-10-2018 RPIT_04525 31cf7701022580ff0fae6d41ed004c96 445 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 120 133 - T 13-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 RPIT_04525 31cf7701022580ff0fae6d41ed004c96 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 369 380 1.5E-30 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 RPIT_04525 31cf7701022580ff0fae6d41ed004c96 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 112 126 1.5E-30 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 RPIT_04525 31cf7701022580ff0fae6d41ed004c96 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 234 254 1.5E-30 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 RPIT_04525 31cf7701022580ff0fae6d41ed004c96 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 192 214 1.5E-30 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 RPIT_04525 31cf7701022580ff0fae6d41ed004c96 445 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 201 442 1.8E-84 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 RPIT_04525 31cf7701022580ff0fae6d41ed004c96 445 SMART SM00839 203 443 2.7E-85 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 RPIT_04525 31cf7701022580ff0fae6d41ed004c96 445 SUPERFAMILY SSF53223 6 195 7.04E-75 T 13-10-2018 RPIT_04525 31cf7701022580ff0fae6d41ed004c96 445 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 55 183 6.1E-49 T 13-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 RPIT_04525 31cf7701022580ff0fae6d41ed004c96 445 Gene3D G3DSA:3.40.50.720 208 370 9.9E-169 T 13-10-2018 RPIT_12845 ba0f6732303cb6925b83905e94e3fd52 401 Gene3D G3DSA:1.50.10.10 1 399 1.8E-135 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 RPIT_12845 ba0f6732303cb6925b83905e94e3fd52 401 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 27 378 2.2E-96 T 13-10-2018 RPIT_12845 ba0f6732303cb6925b83905e94e3fd52 401 SUPERFAMILY SSF48208 11 387 1.12E-88 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 RPIT_04570 aa37b82a3f6f280d1dd3be1180df5a8a 161 Pfam PF17384 RimP C-terminal SH3 domain 89 149 6.6E-14 T 13-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal RPIT_04570 aa37b82a3f6f280d1dd3be1180df5a8a 161 Gene3D G3DSA:3.30.300.70 3 82 4.2E-11 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily RPIT_04570 aa37b82a3f6f280d1dd3be1180df5a8a 161 Pfam PF02576 RimP N-terminal domain 10 85 1.1E-13 T 13-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal RPIT_04570 aa37b82a3f6f280d1dd3be1180df5a8a 161 SUPERFAMILY SSF75420 4 85 7.85E-14 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily RPIT_04570 aa37b82a3f6f280d1dd3be1180df5a8a 161 SUPERFAMILY SSF74942 88 147 2.75E-7 T 13-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily RPIT_04570 aa37b82a3f6f280d1dd3be1180df5a8a 161 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 4 149 19.677 T 13-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 RPIT_13535 829f604f977282d52a6c97f35bc34bd2 105 Pfam PF00085 Thioredoxin 3 103 1.2E-28 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 RPIT_13535 829f604f977282d52a6c97f35bc34bd2 105 Gene3D G3DSA:3.40.30.10 3 105 5.5E-30 T 13-10-2018 RPIT_13535 829f604f977282d52a6c97f35bc34bd2 105 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 103 1.1E-29 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIT_13535 829f604f977282d52a6c97f35bc34bd2 105 SUPERFAMILY SSF52833 2 104 6.56E-33 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_13535 829f604f977282d52a6c97f35bc34bd2 105 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 RPIT_13535 829f604f977282d52a6c97f35bc34bd2 105 PRINTS PR00421 Thioredoxin family signature 22 30 7.2E-7 T 13-10-2018 RPIT_13535 829f604f977282d52a6c97f35bc34bd2 105 PRINTS PR00421 Thioredoxin family signature 30 39 7.2E-7 T 13-10-2018 RPIT_13535 829f604f977282d52a6c97f35bc34bd2 105 PRINTS PR00421 Thioredoxin family signature 69 80 7.2E-7 T 13-10-2018 RPIT_13535 829f604f977282d52a6c97f35bc34bd2 105 PIRSF PIRSF000077 1 105 1.1E-30 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIT_03930 787659efdb0ed8faac182ae99719fdb6 124 Pfam PF01610 Transposase 6 109 7.6E-19 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RPIT_01365 24ee42a37a800e2f811aa94339c73a56 103 Pfam PF02467 Transcription factor WhiB 9 70 1.2E-22 T 13-10-2018 IPR034768 WhiB-like iron-sulfur binding domain RPIT_01365 24ee42a37a800e2f811aa94339c73a56 103 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 75 16.318 T 13-10-2018 IPR003482 Transcription factor WhiB RPIT_10640 e3562641e8b49b1ce0b228206159b27f 460 Pfam PF10996 Beta-Casp domain 232 349 4.5E-24 T 13-10-2018 IPR022712 Beta-Casp domain RPIT_10640 e3562641e8b49b1ce0b228206159b27f 460 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 363 426 7.8E-11 T 13-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain RPIT_10640 e3562641e8b49b1ce0b228206159b27f 460 SMART SM01027 229 349 2.5E-39 T 13-10-2018 IPR022712 Beta-Casp domain RPIT_10640 e3562641e8b49b1ce0b228206159b27f 460 SUPERFAMILY SSF56281 1 434 4.43E-111 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RPIT_10640 e3562641e8b49b1ce0b228206159b27f 460 Gene3D G3DSA:3.40.50.10890 198 375 1.2E-120 T 13-10-2018 RPIT_10640 e3562641e8b49b1ce0b228206159b27f 460 Pfam PF00753 Metallo-beta-lactamase superfamily 3 179 1.7E-12 T 13-10-2018 IPR001279 Metallo-beta-lactamase RPIT_10640 e3562641e8b49b1ce0b228206159b27f 460 Gene3D G3DSA:3.60.15.10 1 409 1.2E-120 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RPIT_10640 e3562641e8b49b1ce0b228206159b27f 460 SMART SM00849 1 224 3.0E-8 T 13-10-2018 IPR001279 Metallo-beta-lactamase RPIT_01755 5e3fea83210a46917a765e71937e0480 259 Pfam PF00005 ABC transporter 21 177 6.2E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_01755 5e3fea83210a46917a765e71937e0480 259 Gene3D G3DSA:3.40.50.300 2 257 2.6E-65 T 13-10-2018 RPIT_01755 5e3fea83210a46917a765e71937e0480 259 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_01755 5e3fea83210a46917a765e71937e0480 259 SUPERFAMILY SSF52540 5 246 1.27E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01755 5e3fea83210a46917a765e71937e0480 259 SMART SM00382 29 230 2.3E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_01755 5e3fea83210a46917a765e71937e0480 259 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 5 259 1.3E-110 T 13-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 RPIT_14515 fd22ff0fceb2d4ecf9226d013bc72546 148 SUPERFAMILY SSF55658 1 57 1.92E-17 T 13-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RPIT_14515 fd22ff0fceb2d4ecf9226d013bc72546 148 Gene3D G3DSA:3.10.430.100 61 148 6.0E-25 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily RPIT_14515 fd22ff0fceb2d4ecf9226d013bc72546 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 24.047 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_14515 fd22ff0fceb2d4ecf9226d013bc72546 148 SUPERFAMILY SSF55653 58 147 4.71E-22 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily RPIT_14515 fd22ff0fceb2d4ecf9226d013bc72546 148 Gene3D G3DSA:3.40.5.10 1 59 2.0E-20 T 13-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_14515 fd22ff0fceb2d4ecf9226d013bc72546 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 7.5E-21 T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_14515 fd22ff0fceb2d4ecf9226d013bc72546 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_14515 fd22ff0fceb2d4ecf9226d013bc72546 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 2.6E-34 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_14515 fd22ff0fceb2d4ecf9226d013bc72546 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 147 2.8E-25 T 13-10-2018 IPR020069 Ribosomal protein L9, C-terminal RPIT_04095 e1d153980e4313276f3ce6c29c480bba 156 SUPERFAMILY SSF54637 24 146 1.2E-25 T 13-10-2018 IPR029069 HotDog domain superfamily RPIT_04095 e1d153980e4313276f3ce6c29c480bba 156 Gene3D G3DSA:3.10.129.10 14 149 3.5E-41 T 13-10-2018 RPIT_04095 e1d153980e4313276f3ce6c29c480bba 156 Pfam PF03061 Thioesterase superfamily 61 137 2.4E-15 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 RPIT_04095 e1d153980e4313276f3ce6c29c480bba 156 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 35 145 3.5E-26 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 RPIT_03225 b85e93ffd1db929ab3d83d715f4e2a9e 358 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 21 289 6.7E-42 T 13-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 RPIT_03225 b85e93ffd1db929ab3d83d715f4e2a9e 358 Gene3D G3DSA:3.20.20.70 9 266 5.3E-59 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_03225 b85e93ffd1db929ab3d83d715f4e2a9e 358 SUPERFAMILY SSF51569 9 354 1.83E-63 T 13-10-2018 RPIT_03030 7b9d470916f79305e50dba32f7e7d38f 397 Pfam PF16353 Domain of unknown function(DUF4981) 5 89 1.8E-14 T 13-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RPIT_03030 7b9d470916f79305e50dba32f7e7d38f 397 SUPERFAMILY SSF74650 112 394 2.98E-67 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 RPIT_03030 7b9d470916f79305e50dba32f7e7d38f 397 SMART SM01038 113 394 1.7E-68 T 13-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RPIT_03030 7b9d470916f79305e50dba32f7e7d38f 397 Gene3D G3DSA:2.70.98.10 100 395 3.4E-89 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 RPIT_03030 7b9d470916f79305e50dba32f7e7d38f 397 SUPERFAMILY SSF49303 5 92 5.83E-17 T 13-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily RPIT_03030 7b9d470916f79305e50dba32f7e7d38f 397 Pfam PF02929 Beta galactosidase small chain 118 391 2.9E-49 T 13-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 RPIT_03030 7b9d470916f79305e50dba32f7e7d38f 397 Gene3D G3DSA:2.60.40.10 2 97 3.5E-21 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_03360 421138f43b41873661021c2214d47232 135 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 6 135 33.783 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RPIT_03360 421138f43b41873661021c2214d47232 135 SUPERFAMILY SSF53137 20 135 6.73E-49 T 13-10-2018 RPIT_03360 421138f43b41873661021c2214d47232 135 ProSitePatterns PS00054 Ribosomal protein S11 signature. 103 125 - T 13-10-2018 IPR018102 Ribosomal S11, conserved site RPIT_03360 421138f43b41873661021c2214d47232 135 Pfam PF00411 Ribosomal protein S11 25 134 5.1E-48 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RPIT_03360 421138f43b41873661021c2214d47232 135 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 16 132 1.5E-57 T 13-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03360 421138f43b41873661021c2214d47232 135 Gene3D G3DSA:3.30.420.80 7 135 7.4E-54 T 13-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 RPIT_03360 421138f43b41873661021c2214d47232 135 PIRSF PIRSF002131 2 135 1.2E-53 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RPIT_04440 910dbaf57401d039a7c495b40f788fab 262 SUPERFAMILY SSF52540 6 241 8.33E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04440 910dbaf57401d039a7c495b40f788fab 262 SMART SM00382 29 252 7.4E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_04440 910dbaf57401d039a7c495b40f788fab 262 Pfam PF00005 ABC transporter 20 171 6.1E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_04440 910dbaf57401d039a7c495b40f788fab 262 Gene3D G3DSA:3.40.50.300 2 259 2.5E-56 T 13-10-2018 RPIT_14205 959198820b322f7184fec00df62878af 350 Gene3D G3DSA:3.40.50.720 161 315 3.9E-130 T 13-10-2018 RPIT_14205 959198820b322f7184fec00df62878af 350 Gene3D G3DSA:3.90.180.10 14 343 3.9E-130 T 13-10-2018 RPIT_14205 959198820b322f7184fec00df62878af 350 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RPIT_14205 959198820b322f7184fec00df62878af 350 SMART SM00829 14 343 1.9E-8 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIT_14205 959198820b322f7184fec00df62878af 350 SUPERFAMILY SSF51735 151 313 6.29E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_14205 959198820b322f7184fec00df62878af 350 Pfam PF00107 Zinc-binding dehydrogenase 187 309 9.8E-20 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIT_14205 959198820b322f7184fec00df62878af 350 SUPERFAMILY SSF50129 9 173 6.09E-51 T 13-10-2018 IPR011032 GroES-like superfamily RPIT_14205 959198820b322f7184fec00df62878af 350 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 145 1.5E-27 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIT_10690 4f384d87b4ec98eea02d5d8021059488 304 Gene3D G3DSA:3.30.420.150 125 304 2.4E-50 T 13-10-2018 RPIT_10690 4f384d87b4ec98eea02d5d8021059488 304 Pfam PF02541 Ppx/GppA phosphatase family 30 291 7.1E-49 T 13-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 RPIT_10690 4f384d87b4ec98eea02d5d8021059488 304 SUPERFAMILY SSF53067 4 124 9.5E-32 T 13-10-2018 RPIT_10690 4f384d87b4ec98eea02d5d8021059488 304 SUPERFAMILY SSF53067 129 303 3.21E-34 T 13-10-2018 RPIT_10690 4f384d87b4ec98eea02d5d8021059488 304 Gene3D G3DSA:3.30.420.40 1 124 2.1E-39 T 13-10-2018 RPIT_05195 b3b759c61ff31e9ce6d55cd92a425999 418 Gene3D G3DSA:3.40.47.10 258 403 6.2E-41 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 RPIT_05195 b3b759c61ff31e9ce6d55cd92a425999 418 SUPERFAMILY SSF53901 216 413 1.42E-62 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 RPIT_05195 b3b759c61ff31e9ce6d55cd92a425999 418 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 256 370 2.2E-31 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal RPIT_05195 b3b759c61ff31e9ce6d55cd92a425999 418 Gene3D G3DSA:3.40.47.10 1 257 4.2E-75 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 RPIT_05195 b3b759c61ff31e9ce6d55cd92a425999 418 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 248 2.7E-51 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal RPIT_05195 b3b759c61ff31e9ce6d55cd92a425999 418 SMART SM00825 Beta-ketoacyl synthase 5 414 1.2E-13 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RPIT_05195 b3b759c61ff31e9ce6d55cd92a425999 418 SUPERFAMILY SSF53901 4 253 3.42E-64 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 RPIT_04060 ef463839105f9e67c128604f8c156ea5 312 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 36 1.5E-6 T 13-10-2018 IPR019933 DivIVA domain RPIT_02750 a1aae1721408a0bc5995a748479d1f2d 103 Pfam PF00037 4Fe-4S binding domain 55 77 4.3E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIT_02750 a1aae1721408a0bc5995a748479d1f2d 103 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 61 72 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIT_02750 a1aae1721408a0bc5995a748479d1f2d 103 SUPERFAMILY SSF54862 5 92 6.98E-18 T 13-10-2018 RPIT_02750 a1aae1721408a0bc5995a748479d1f2d 103 Gene3D G3DSA:3.30.70.3270 1 103 7.0E-23 T 13-10-2018 RPIT_12710 600cbd0978d4bed9d3b6f84a14eabf90 635 Gene3D G3DSA:1.10.510.10 99 287 5.8E-53 T 13-10-2018 RPIT_12710 600cbd0978d4bed9d3b6f84a14eabf90 635 Pfam PF03793 PASTA domain 456 513 1.9E-6 T 13-10-2018 IPR005543 PASTA domain RPIT_12710 600cbd0978d4bed9d3b6f84a14eabf90 635 Pfam PF03793 PASTA domain 519 578 2.3E-8 T 13-10-2018 IPR005543 PASTA domain RPIT_12710 600cbd0978d4bed9d3b6f84a14eabf90 635 Pfam PF03793 PASTA domain 380 440 7.9E-9 T 13-10-2018 IPR005543 PASTA domain RPIT_12710 600cbd0978d4bed9d3b6f84a14eabf90 635 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 137 149 - T 13-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RPIT_12710 600cbd0978d4bed9d3b6f84a14eabf90 635 Pfam PF00069 Protein kinase domain 12 266 2.9E-50 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RPIT_12710 600cbd0978d4bed9d3b6f84a14eabf90 635 SUPERFAMILY SSF56112 9 283 1.31E-76 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily RPIT_12710 600cbd0978d4bed9d3b6f84a14eabf90 635 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 41 - T 13-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 RPIT_12710 600cbd0978d4bed9d3b6f84a14eabf90 635 Gene3D G3DSA:3.30.10.20 518 578 5.4E-10 T 13-10-2018 RPIT_12710 600cbd0978d4bed9d3b6f84a14eabf90 635 Gene3D G3DSA:3.30.10.20 377 442 6.7E-12 T 13-10-2018 RPIT_12710 600cbd0978d4bed9d3b6f84a14eabf90 635 Gene3D G3DSA:3.30.10.20 443 515 1.9E-10 T 13-10-2018 RPIT_12710 600cbd0978d4bed9d3b6f84a14eabf90 635 Gene3D G3DSA:3.30.200.20 2 97 7.2E-36 T 13-10-2018 RPIT_12710 600cbd0978d4bed9d3b6f84a14eabf90 635 SMART SM00220 12 280 1.7E-63 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RPIT_12710 600cbd0978d4bed9d3b6f84a14eabf90 635 SMART SM00740 442 514 0.0015 T 13-10-2018 IPR005543 PASTA domain RPIT_12710 600cbd0978d4bed9d3b6f84a14eabf90 635 SMART SM00740 375 441 4.3E-7 T 13-10-2018 IPR005543 PASTA domain RPIT_12710 600cbd0978d4bed9d3b6f84a14eabf90 635 SMART SM00740 516 579 0.0066 T 13-10-2018 IPR005543 PASTA domain RPIT_02965 0d3a25b390c01c65d51e92eb7099e5d7 752 SUPERFAMILY SSF51998 10 751 1.19E-270 T 13-10-2018 RPIT_02965 0d3a25b390c01c65d51e92eb7099e5d7 752 Pfam PF02901 Pyruvate formate lyase-like 28 611 5.9E-196 T 13-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 RPIT_02965 0d3a25b390c01c65d51e92eb7099e5d7 752 Pfam PF01228 Glycine radical 627 733 1.8E-36 T 13-10-2018 IPR001150 Glycine radical domain GO:0003824 RPIT_02965 0d3a25b390c01c65d51e92eb7099e5d7 752 ProSitePatterns PS00850 Glycine radical domain signature. 722 730 - T 13-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site RPIT_02965 0d3a25b390c01c65d51e92eb7099e5d7 752 PIRSF PIRSF000379 11 752 0.0 T 13-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 RPIT_02965 0d3a25b390c01c65d51e92eb7099e5d7 752 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 14 751 0.0 T 13-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 RPIT_02965 0d3a25b390c01c65d51e92eb7099e5d7 752 Gene3D G3DSA:3.20.70.20 5 752 2.5E-291 T 13-10-2018 RPIT_00765 1852b6be5945e74471fd9f84502bb529 282 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 66 275 1.4E-64 T 13-10-2018 RPIT_00765 1852b6be5945e74471fd9f84502bb529 282 Pfam PF12710 haloacid dehalogenase-like hydrolase 73 243 3.2E-19 T 13-10-2018 RPIT_00765 1852b6be5945e74471fd9f84502bb529 282 SUPERFAMILY SSF56784 66 274 1.9E-42 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_00765 1852b6be5945e74471fd9f84502bb529 282 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 71 245 2.5E-26 T 13-10-2018 RPIT_00765 1852b6be5945e74471fd9f84502bb529 282 Gene3D G3DSA:3.40.50.1000 23 277 9.4E-68 T 13-10-2018 IPR023214 HAD superfamily RPIT_04585 a5ab28649fbb726e3d84c16af850ee51 623 Gene3D G3DSA:3.40.720.10 232 532 2.1E-63 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 RPIT_04585 a5ab28649fbb726e3d84c16af850ee51 623 Pfam PF00884 Sulfatase 246 524 8.6E-46 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 RPIT_04585 a5ab28649fbb726e3d84c16af850ee51 623 SUPERFAMILY SSF53649 244 613 5.1E-70 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 RPIT_03025 d6a56991487918cfd275095a7cadd9ea 607 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 462 600 4.1E-41 T 13-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding RPIT_03025 d6a56991487918cfd275095a7cadd9ea 607 Gene3D G3DSA:3.10.580.10 138 270 4.2E-31 T 13-10-2018 RPIT_03025 d6a56991487918cfd275095a7cadd9ea 607 SUPERFAMILY SSF54631 146 262 2.02E-30 T 13-10-2018 RPIT_03025 d6a56991487918cfd275095a7cadd9ea 607 SMART SM00116 217 264 1.1E-6 T 13-10-2018 IPR000644 CBS domain RPIT_03025 d6a56991487918cfd275095a7cadd9ea 607 SMART SM00116 154 201 6.2E-10 T 13-10-2018 IPR000644 CBS domain RPIT_03025 d6a56991487918cfd275095a7cadd9ea 607 SUPERFAMILY SSF51206 5 125 1.22E-17 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like RPIT_03025 d6a56991487918cfd275095a7cadd9ea 607 Gene3D G3DSA:2.60.120.10 2 132 3.2E-15 T 13-10-2018 IPR014710 RmlC-like jelly roll fold RPIT_03025 d6a56991487918cfd275095a7cadd9ea 607 Pfam PF00027 Cyclic nucleotide-binding domain 35 116 2.4E-13 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain RPIT_03025 d6a56991487918cfd275095a7cadd9ea 607 SMART SM00100 16 130 2.5E-4 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain RPIT_03025 d6a56991487918cfd275095a7cadd9ea 607 Pfam PF00571 CBS domain 213 262 1.9E-7 T 13-10-2018 IPR000644 CBS domain RPIT_03025 d6a56991487918cfd275095a7cadd9ea 607 Pfam PF00571 CBS domain 147 201 2.2E-11 T 13-10-2018 IPR000644 CBS domain RPIT_03025 d6a56991487918cfd275095a7cadd9ea 607 Pfam PF03445 Putative nucleotidyltransferase DUF294 289 424 1.3E-47 T 13-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 RPIT_08305 5a4845ccd7464d93bd51103ecaa0c58e 87 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 1 87 17.089 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 RPIT_08305 5a4845ccd7464d93bd51103ecaa0c58e 87 Gene3D G3DSA:1.10.287.1080 1 87 2.4E-21 T 13-10-2018 RPIT_08305 5a4845ccd7464d93bd51103ecaa0c58e 87 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 86 1.3E-22 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 RPIT_08305 5a4845ccd7464d93bd51103ecaa0c58e 87 SUPERFAMILY SSF101386 2 87 3.74E-22 T 13-10-2018 RPIT_08305 5a4845ccd7464d93bd51103ecaa0c58e 87 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 2 83 1.3E-9 T 13-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 RPIT_01935 d3d71391166f2dc3f453b93af6f6bb16 285 SUPERFAMILY SSF54637 66 158 3.73E-12 T 13-10-2018 IPR029069 HotDog domain superfamily RPIT_01935 d3d71391166f2dc3f453b93af6f6bb16 285 SUPERFAMILY SSF54637 172 284 7.28E-25 T 13-10-2018 IPR029069 HotDog domain superfamily RPIT_01935 d3d71391166f2dc3f453b93af6f6bb16 285 Pfam PF01575 MaoC like domain 185 269 4.4E-15 T 13-10-2018 IPR002539 MaoC-like dehydratase domain RPIT_01935 d3d71391166f2dc3f453b93af6f6bb16 285 Gene3D G3DSA:3.10.129.10 35 285 8.5E-75 T 13-10-2018 RPIT_01935 d3d71391166f2dc3f453b93af6f6bb16 285 Pfam PF13452 N-terminal half of MaoC dehydratase 67 132 3.8E-5 T 13-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 RPIT_01935 d3d71391166f2dc3f453b93af6f6bb16 285 PRINTS PR01483 Fatty acid synthase signature 185 207 8.7E-8 T 13-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 RPIT_01935 d3d71391166f2dc3f453b93af6f6bb16 285 PRINTS PR01483 Fatty acid synthase signature 207 228 8.7E-8 T 13-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 RPIT_01320 e46f7b06fcbed664cf84f0ac99d93a1b 1307 SUPERFAMILY SSF49899 6 175 8.71E-16 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RPIT_01320 e46f7b06fcbed664cf84f0ac99d93a1b 1307 Gene3D G3DSA:2.60.120.560 882 1029 7.4E-23 T 13-10-2018 RPIT_01320 e46f7b06fcbed664cf84f0ac99d93a1b 1307 Pfam PF02018 Carbohydrate binding domain 348 489 2.2E-10 T 13-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 RPIT_01320 e46f7b06fcbed664cf84f0ac99d93a1b 1307 SMART SM00813 757 1120 5.5E-45 T 13-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 RPIT_01320 e46f7b06fcbed664cf84f0ac99d93a1b 1307 Gene3D G3DSA:3.20.20.80 503 830 6.5E-80 T 13-10-2018 RPIT_01320 e46f7b06fcbed664cf84f0ac99d93a1b 1307 SUPERFAMILY SSF49899 911 1025 1.0E-6 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RPIT_01320 e46f7b06fcbed664cf84f0ac99d93a1b 1307 Pfam PF07081 Protein of unknown function (DUF1349) 6 176 1.0E-11 T 13-10-2018 IPR009784 Protein of unknown function DUF1349 RPIT_01320 e46f7b06fcbed664cf84f0ac99d93a1b 1307 Gene3D G3DSA:2.60.120.260 349 502 5.9E-14 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_01320 e46f7b06fcbed664cf84f0ac99d93a1b 1307 SUPERFAMILY SSF49785 348 502 9.99E-11 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_01320 e46f7b06fcbed664cf84f0ac99d93a1b 1307 SUPERFAMILY SSF51445 481 835 6.32E-59 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_01320 e46f7b06fcbed664cf84f0ac99d93a1b 1307 Gene3D G3DSA:2.60.120.200 3 183 1.8E-24 T 13-10-2018 RPIT_01320 e46f7b06fcbed664cf84f0ac99d93a1b 1307 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 757 1098 5.9E-36 T 13-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 RPIT_14410 d6b9cf464563b8edcc3f0f3ead09a054 353 SUPERFAMILY SSF52075 204 336 9.55E-26 T 13-10-2018 RPIT_14410 d6b9cf464563b8edcc3f0f3ead09a054 353 Gene3D G3DSA:3.80.10.10 172 345 2.2E-28 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily RPIT_13810 497fc30348018c30c4fbaf7b7fc24bd8 436 SUPERFAMILY SSF53756 115 428 1.21E-50 T 13-10-2018 RPIT_13810 497fc30348018c30c4fbaf7b7fc24bd8 436 Gene3D G3DSA:3.40.50.2000 115 425 2.0E-47 T 13-10-2018 RPIT_13810 497fc30348018c30c4fbaf7b7fc24bd8 436 Pfam PF13692 Glycosyl transferases group 1 252 396 1.6E-21 T 13-10-2018 RPIT_13810 497fc30348018c30c4fbaf7b7fc24bd8 436 Gene3D G3DSA:3.40.50.2000 228 411 2.0E-47 T 13-10-2018 RPIT_13810 497fc30348018c30c4fbaf7b7fc24bd8 436 Pfam PF13579 Glycosyl transferase 4-like domain 77 226 2.4E-8 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RPIT_13155 2a08cc784f898963353faf118b0cd5c2 921 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 571 597 1.0E-6 T 13-10-2018 IPR023908 xxxLxxG heptad repeat RPIT_13155 2a08cc784f898963353faf118b0cd5c2 921 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 227 253 4.6E-7 T 13-10-2018 IPR023908 xxxLxxG heptad repeat RPIT_13155 2a08cc784f898963353faf118b0cd5c2 921 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 268 295 1.5E-4 T 13-10-2018 IPR023908 xxxLxxG heptad repeat RPIT_13155 2a08cc784f898963353faf118b0cd5c2 921 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 544 569 6.4E-5 T 13-10-2018 IPR023908 xxxLxxG heptad repeat RPIT_13155 2a08cc784f898963353faf118b0cd5c2 921 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 179 204 1.6E-5 T 13-10-2018 IPR023908 xxxLxxG heptad repeat RPIT_13155 2a08cc784f898963353faf118b0cd5c2 921 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 249 274 3.1E-5 T 13-10-2018 IPR023908 xxxLxxG heptad repeat RPIT_13155 2a08cc784f898963353faf118b0cd5c2 921 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 619 643 3.9E-5 T 13-10-2018 IPR023908 xxxLxxG heptad repeat RPIT_13155 2a08cc784f898963353faf118b0cd5c2 921 SUPERFAMILY SSF101967 535 678 9.81E-6 T 13-10-2018 RPIT_11610 e698d8a6d71000ec0a148082e347c37e 400 Gene3D G3DSA:3.40.50.20 28 105 7.1E-6 T 13-10-2018 RPIT_11610 e698d8a6d71000ec0a148082e347c37e 400 SUPERFAMILY SSF56059 107 286 2.17E-8 T 13-10-2018 RPIT_11610 e698d8a6d71000ec0a148082e347c37e 400 Gene3D G3DSA:3.30.1490.20 106 198 7.1E-6 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 RPIT_11610 e698d8a6d71000ec0a148082e347c37e 400 Gene3D G3DSA:3.30.470.20 199 292 7.1E-6 T 13-10-2018 RPIT_12255 1bacba384db4b16c13aea38143bf2de8 134 SUPERFAMILY SSF103473 9 121 3.4E-5 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_03875 8a6dc530d5c48a459d89b788f7364b0e 405 Pfam PF02687 FtsX-like permease family 313 399 1.5E-7 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 RPIT_03875 8a6dc530d5c48a459d89b788f7364b0e 405 Pfam PF12704 MacB-like periplasmic core domain 35 241 1.8E-11 T 13-10-2018 IPR025857 MacB-like periplasmic core domain RPIT_13415 60b5b403d846db4931c2accf8203873f 358 SUPERFAMILY SSF51395 3 324 4.64E-73 T 13-10-2018 RPIT_13415 60b5b403d846db4931c2accf8203873f 358 Gene3D G3DSA:3.20.20.70 2 323 1.1E-77 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_13415 60b5b403d846db4931c2accf8203873f 358 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 17 316 2.5E-45 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RPIT_11370 0dfd6fe3a552c5a62d61c8b8fc617868 497 Gene3D G3DSA:3.20.20.70 1 461 7.3E-155 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_11370 0dfd6fe3a552c5a62d61c8b8fc617868 497 SUPERFAMILY SSF89000 298 458 5.1E-48 T 13-10-2018 RPIT_11370 0dfd6fe3a552c5a62d61c8b8fc617868 497 SUPERFAMILY SSF51569 4 291 1.81E-85 T 13-10-2018 RPIT_11370 0dfd6fe3a552c5a62d61c8b8fc617868 497 Pfam PF02436 Conserved carboxylase domain 293 489 4.8E-47 T 13-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 RPIT_11370 0dfd6fe3a552c5a62d61c8b8fc617868 497 Pfam PF00682 HMGL-like 8 271 8.8E-47 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 RPIT_10880 083c93915d0695b80295a828da0f6efd 229 Gene3D G3DSA:3.40.50.1400 116 224 8.3E-16 T 13-10-2018 RPIT_10880 083c93915d0695b80295a828da0f6efd 229 Gene3D G3DSA:3.40.50.1400 2 115 3.0E-26 T 13-10-2018 RPIT_10880 083c93915d0695b80295a828da0f6efd 229 Pfam PF01903 CbiX 10 108 1.4E-18 T 13-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 RPIT_10880 083c93915d0695b80295a828da0f6efd 229 Pfam PF01903 CbiX 128 217 9.8E-7 T 13-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 RPIT_10880 083c93915d0695b80295a828da0f6efd 229 SUPERFAMILY SSF53800 2 221 1.42E-32 T 13-10-2018 RPIT_03510 73ee1a0c90d9f4c3586449fe56dee266 972 SUPERFAMILY SSF81593 329 473 2.28E-32 T 13-10-2018 RPIT_03510 73ee1a0c90d9f4c3586449fe56dee266 972 SUPERFAMILY SSF81301 64 322 3.6E-57 T 13-10-2018 RPIT_03510 73ee1a0c90d9f4c3586449fe56dee266 972 SUPERFAMILY SSF81593 820 969 2.51E-33 T 13-10-2018 RPIT_03510 73ee1a0c90d9f4c3586449fe56dee266 972 Gene3D G3DSA:3.30.460.100 88 317 1.2E-56 T 13-10-2018 RPIT_03510 73ee1a0c90d9f4c3586449fe56dee266 972 Gene3D G3DSA:3.30.460.100 587 807 3.7E-50 T 13-10-2018 RPIT_03510 73ee1a0c90d9f4c3586449fe56dee266 972 Pfam PF08335 GlnD PII-uridylyltransferase 828 969 1.1E-20 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RPIT_03510 73ee1a0c90d9f4c3586449fe56dee266 972 Pfam PF08335 GlnD PII-uridylyltransferase 337 473 1.2E-28 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RPIT_03510 73ee1a0c90d9f4c3586449fe56dee266 972 Gene3D G3DSA:1.20.120.330 817 970 1.2E-34 T 13-10-2018 RPIT_03510 73ee1a0c90d9f4c3586449fe56dee266 972 Gene3D G3DSA:1.20.120.330 328 475 1.5E-36 T 13-10-2018 RPIT_03510 73ee1a0c90d9f4c3586449fe56dee266 972 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 579 804 7.1E-39 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RPIT_03510 73ee1a0c90d9f4c3586449fe56dee266 972 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 79 313 1.7E-41 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RPIT_03510 73ee1a0c90d9f4c3586449fe56dee266 972 SUPERFAMILY SSF81301 550 812 9.15E-55 T 13-10-2018 RPIT_12940 d04928c4799b8faf856b387dd5903ff7 429 Pfam PF00534 Glycosyl transferases group 1 238 380 5.3E-23 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 RPIT_12940 d04928c4799b8faf856b387dd5903ff7 429 SUPERFAMILY SSF53756 13 418 5.89E-64 T 13-10-2018 RPIT_12940 d04928c4799b8faf856b387dd5903ff7 429 Pfam PF13439 Glycosyltransferase Family 4 29 227 4.1E-24 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RPIT_12940 d04928c4799b8faf856b387dd5903ff7 429 Gene3D G3DSA:3.40.50.2000 234 400 9.9E-29 T 13-10-2018 RPIT_07190 3ffdb1c0750331f27e19edf915d97056 174 SUPERFAMILY SSF55136 43 156 5.62E-14 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily RPIT_07190 3ffdb1c0750331f27e19edf915d97056 174 Gene3D G3DSA:3.20.80.10 15 173 6.3E-37 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily RPIT_07190 3ffdb1c0750331f27e19edf915d97056 174 SMART SM00871 16 173 1.4E-7 T 13-10-2018 IPR010499 Bacterial transcription activator, effector binding RPIT_07190 3ffdb1c0750331f27e19edf915d97056 174 Pfam PF06445 GyrI-like small molecule binding domain 68 172 1.3E-8 T 13-10-2018 IPR029442 GyrI-like small molecule binding domain RPIT_01060 010e8682cb7b606a14222ce0b5a542ba 424 SUPERFAMILY SSF53850 26 421 1.18E-51 T 13-10-2018 RPIT_01060 010e8682cb7b606a14222ce0b5a542ba 424 Gene3D G3DSA:3.40.190.10 61 365 8.0E-120 T 13-10-2018 RPIT_01060 010e8682cb7b606a14222ce0b5a542ba 424 Gene3D G3DSA:3.40.190.10 149 403 8.0E-120 T 13-10-2018 RPIT_01060 010e8682cb7b606a14222ce0b5a542ba 424 Pfam PF01547 Bacterial extracellular solute-binding protein 56 336 4.4E-22 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein RPIT_08375 1ffc43a6b7e0433aee3ede149f745f89 105 Pfam PF13518 Helix-turn-helix domain 12 62 2.6E-8 T 13-10-2018 RPIT_08375 1ffc43a6b7e0433aee3ede149f745f89 105 SUPERFAMILY SSF48295 8 62 3.56E-12 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 RPIT_12200 d3ad6c9c0e8857e87984f3e46c9e5f41 332 Gene3D G3DSA:3.40.50.720 1 121 1.3E-37 T 13-10-2018 RPIT_12200 d3ad6c9c0e8857e87984f3e46c9e5f41 332 Gene3D G3DSA:3.30.360.10 122 326 5.8E-51 T 13-10-2018 RPIT_12200 d3ad6c9c0e8857e87984f3e46c9e5f41 332 SUPERFAMILY SSF51735 3 157 4.49E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_12200 d3ad6c9c0e8857e87984f3e46c9e5f41 332 SUPERFAMILY SSF55347 128 290 3.27E-32 T 13-10-2018 RPIT_12200 d3ad6c9c0e8857e87984f3e46c9e5f41 332 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 119 1.5E-21 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 RPIT_06375 9c8c140af56531bb613ae1d8c8cd4afe 362 Gene3D G3DSA:3.90.1150.10 15 348 1.7E-119 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_06375 9c8c140af56531bb613ae1d8c8cd4afe 362 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 218 227 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 RPIT_06375 9c8c140af56531bb613ae1d8c8cd4afe 362 SUPERFAMILY SSF53383 28 354 1.46E-74 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_06375 9c8c140af56531bb613ae1d8c8cd4afe 362 Gene3D G3DSA:3.40.640.10 50 268 1.7E-119 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_06375 9c8c140af56531bb613ae1d8c8cd4afe 362 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 355 53.484 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 RPIT_06375 9c8c140af56531bb613ae1d8c8cd4afe 362 Pfam PF00155 Aminotransferase class I and II 28 348 1.8E-58 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIT_06375 9c8c140af56531bb613ae1d8c8cd4afe 362 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 17 353 2.6E-89 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 RPIT_10855 793db4d8e3c323caab248c8e506af086 380 Gene3D G3DSA:3.90.220.20 188 380 5.2E-26 T 13-10-2018 RPIT_10855 793db4d8e3c323caab248c8e506af086 380 Pfam PF01420 Type I restriction modification DNA specificity domain 239 356 7.3E-6 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RPIT_10855 793db4d8e3c323caab248c8e506af086 380 Pfam PF01420 Type I restriction modification DNA specificity domain 3 159 1.7E-21 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RPIT_10855 793db4d8e3c323caab248c8e506af086 380 SUPERFAMILY SSF116734 3 186 2.29E-39 T 13-10-2018 RPIT_10855 793db4d8e3c323caab248c8e506af086 380 SUPERFAMILY SSF116734 191 380 7.85E-23 T 13-10-2018 RPIT_10855 793db4d8e3c323caab248c8e506af086 380 Gene3D G3DSA:3.90.220.20 1 165 1.2E-34 T 13-10-2018 RPIT_04820 4362e7f143995496e92f9b8a57df78b2 306 SUPERFAMILY SSF53613 1 305 1.26E-64 T 13-10-2018 IPR029056 Ribokinase-like RPIT_04820 4362e7f143995496e92f9b8a57df78b2 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RPIT_04820 4362e7f143995496e92f9b8a57df78b2 306 Gene3D G3DSA:3.40.1190.20 1 306 2.2E-73 T 13-10-2018 IPR029056 Ribokinase-like RPIT_04820 4362e7f143995496e92f9b8a57df78b2 306 Pfam PF00294 pfkB family carbohydrate kinase 4 296 1.3E-50 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB RPIT_03180 91c8eb825051a90c889395c213732ff9 60 SUPERFAMILY SSF55129 1 59 2.09E-20 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily RPIT_03180 91c8eb825051a90c889395c213732ff9 60 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 4.6E-17 T 13-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RPIT_03180 91c8eb825051a90c889395c213732ff9 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.512 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03180 91c8eb825051a90c889395c213732ff9 60 PIRSF PIRSF002211 1 60 2.3E-27 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03180 91c8eb825051a90c889395c213732ff9 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 8.5E-23 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03180 91c8eb825051a90c889395c213732ff9 60 Gene3D G3DSA:3.30.1390.20 1 60 4.8E-25 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily RPIT_01280 36ca4c895cb9db476cbc3f41e9e5f6d2 139 Pfam PF00462 Glutaredoxin 65 123 5.4E-8 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 RPIT_01280 36ca4c895cb9db476cbc3f41e9e5f6d2 139 Gene3D G3DSA:3.40.30.10 62 139 3.6E-15 T 13-10-2018 RPIT_01280 36ca4c895cb9db476cbc3f41e9e5f6d2 139 SUPERFAMILY SSF52833 64 137 1.59E-10 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_03545 0da3ec2e4333b27a26527cdb393c907c 450 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 1.3E-31 T 13-10-2018 RPIT_03545 0da3ec2e4333b27a26527cdb393c907c 450 PRINTS PR00173 Glutamate-aspartate symporter signature 22 42 1.3E-31 T 13-10-2018 RPIT_03545 0da3ec2e4333b27a26527cdb393c907c 450 PRINTS PR00173 Glutamate-aspartate symporter signature 224 243 1.3E-31 T 13-10-2018 RPIT_03545 0da3ec2e4333b27a26527cdb393c907c 450 PRINTS PR00173 Glutamate-aspartate symporter signature 70 90 1.3E-31 T 13-10-2018 RPIT_03545 0da3ec2e4333b27a26527cdb393c907c 450 PRINTS PR00173 Glutamate-aspartate symporter signature 325 351 1.3E-31 T 13-10-2018 RPIT_03545 0da3ec2e4333b27a26527cdb393c907c 450 PRINTS PR00173 Glutamate-aspartate symporter signature 387 407 1.3E-31 T 13-10-2018 RPIT_03545 0da3ec2e4333b27a26527cdb393c907c 450 PRINTS PR00173 Glutamate-aspartate symporter signature 100 125 1.3E-31 T 13-10-2018 RPIT_03545 0da3ec2e4333b27a26527cdb393c907c 450 PRINTS PR00173 Glutamate-aspartate symporter signature 177 199 1.3E-31 T 13-10-2018 RPIT_03545 0da3ec2e4333b27a26527cdb393c907c 450 SUPERFAMILY SSF118215 24 433 1.96E-93 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 RPIT_03545 0da3ec2e4333b27a26527cdb393c907c 450 Pfam PF00375 Sodium:dicarboxylate symporter family 24 432 1.4E-103 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RPIT_03545 0da3ec2e4333b27a26527cdb393c907c 450 Gene3D G3DSA:1.10.3860.10 17 445 8.1E-106 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 RPIT_10195 644755207525874871cab063d6474988 280 SUPERFAMILY SSF54001 9 261 4.91E-33 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily RPIT_10195 644755207525874871cab063d6474988 280 Pfam PF01841 Transglutaminase-like superfamily 126 233 7.5E-19 T 13-10-2018 IPR002931 Transglutaminase-like RPIT_10195 644755207525874871cab063d6474988 280 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 4 82 2.3E-18 T 13-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal RPIT_10195 644755207525874871cab063d6474988 280 SMART SM00460 168 235 8.2E-13 T 13-10-2018 IPR002931 Transglutaminase-like RPIT_10195 644755207525874871cab063d6474988 280 Gene3D G3DSA:3.10.620.30 75 269 4.1E-43 T 13-10-2018 RPIT_03780 f5fe42b151abaeb03c988aefc14921d1 252 SMART SM00563 35 155 4.8E-32 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 RPIT_03780 f5fe42b151abaeb03c988aefc14921d1 252 Pfam PF01553 Acyltransferase 25 152 1.8E-23 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 RPIT_03780 f5fe42b151abaeb03c988aefc14921d1 252 SUPERFAMILY SSF69593 2 217 4.58E-46 T 13-10-2018 RPIT_07215 98f89f53b9dac270089e5dcc2fa59b62 161 PIRSF PIRSF021700 1 160 8.8E-66 T 13-10-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase RPIT_07215 98f89f53b9dac270089e5dcc2fa59b62 161 SUPERFAMILY SSF54593 5 158 2.18E-49 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_07215 98f89f53b9dac270089e5dcc2fa59b62 161 Gene3D G3DSA:3.10.180.70 2 161 1.2E-62 T 13-10-2018 RPIT_07215 98f89f53b9dac270089e5dcc2fa59b62 161 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 6 120 3.4E-47 T 13-10-2018 IPR028973 PhnB-like RPIT_02430 6538f7bc8f0fec701e7f1dc05ff062e5 494 SUPERFAMILY SSF48695 63 469 8.05E-131 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily RPIT_02430 6538f7bc8f0fec701e7f1dc05ff062e5 494 Gene3D G3DSA:1.20.140.10 355 469 2.6E-113 T 13-10-2018 RPIT_02430 6538f7bc8f0fec701e7f1dc05ff062e5 494 Gene3D G3DSA:1.10.1130.10 73 354 2.6E-113 T 13-10-2018 RPIT_02430 6538f7bc8f0fec701e7f1dc05ff062e5 494 Pfam PF02335 Cytochrome c552 69 471 2.9E-134 T 13-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RPIT_02430 6538f7bc8f0fec701e7f1dc05ff062e5 494 PIRSF PIRSF000243 15 492 7.6E-148 T 13-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 RPIT_05605 4460c0fa4c921a65eb5048a79cec5168 379 Gene3D G3DSA:3.40.50.150 197 373 2.1E-49 T 13-10-2018 RPIT_05605 4460c0fa4c921a65eb5048a79cec5168 379 Gene3D G3DSA:2.40.50.140 1 68 1.8E-22 T 13-10-2018 RPIT_05605 4460c0fa4c921a65eb5048a79cec5168 379 Gene3D G3DSA:3.40.50.150 69 131 1.6E-7 T 13-10-2018 RPIT_05605 4460c0fa4c921a65eb5048a79cec5168 379 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 13-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site RPIT_05605 4460c0fa4c921a65eb5048a79cec5168 379 SUPERFAMILY SSF53335 62 374 3.43E-55 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_05605 4460c0fa4c921a65eb5048a79cec5168 379 SUPERFAMILY SSF50249 2 59 8.57E-11 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_05605 4460c0fa4c921a65eb5048a79cec5168 379 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 300 372 2.9E-7 T 13-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 RPIT_05855 668864872ea8b16e7c3791560b0a766a 334 SUPERFAMILY SSF53474 42 319 4.16E-66 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_05855 668864872ea8b16e7c3791560b0a766a 334 Gene3D G3DSA:3.40.50.1820 3 312 1.5E-80 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_05855 668864872ea8b16e7c3791560b0a766a 334 Pfam PF07859 alpha/beta hydrolase fold 83 295 2.4E-65 T 13-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 RPIT_13145 a8f792ae3a84ea9f7a44a75caea4e7db 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 452 1.6E-65 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RPIT_13145 a8f792ae3a84ea9f7a44a75caea4e7db 505 Gene3D G3DSA:3.30.420.40 3 254 2.7E-111 T 13-10-2018 RPIT_13145 a8f792ae3a84ea9f7a44a75caea4e7db 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 498 5.9E-225 T 13-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 RPIT_13145 a8f792ae3a84ea9f7a44a75caea4e7db 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 253 2.7E-79 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RPIT_13145 a8f792ae3a84ea9f7a44a75caea4e7db 505 PIRSF PIRSF000538 3 504 4.3E-172 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RPIT_13145 a8f792ae3a84ea9f7a44a75caea4e7db 505 SUPERFAMILY SSF53067 4 256 5.18E-89 T 13-10-2018 RPIT_13145 a8f792ae3a84ea9f7a44a75caea4e7db 505 Hamap MF_00186 Glycerol kinase [glpK]. 3 499 56.163 T 13-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 RPIT_13145 a8f792ae3a84ea9f7a44a75caea4e7db 505 Gene3D G3DSA:3.30.420.40 255 505 2.1E-96 T 13-10-2018 RPIT_13145 a8f792ae3a84ea9f7a44a75caea4e7db 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 364 384 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RPIT_13145 a8f792ae3a84ea9f7a44a75caea4e7db 505 SUPERFAMILY SSF53067 256 499 1.55E-83 T 13-10-2018 RPIT_09470 e2e1375d45e955508b12787f0cc77781 182 SUPERFAMILY SSF55144 4 181 2.62E-34 T 13-10-2018 IPR009097 Cyclic phosphodiesterase RPIT_09470 e2e1375d45e955508b12787f0cc77781 182 Gene3D G3DSA:3.90.1140.10 4 182 6.1E-39 T 13-10-2018 RPIT_09470 e2e1375d45e955508b12787f0cc77781 182 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 4 181 2.0E-29 T 13-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 RPIT_09470 e2e1375d45e955508b12787f0cc77781 182 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 3 181 18.384 T 13-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 RPIT_09470 e2e1375d45e955508b12787f0cc77781 182 Pfam PF13563 2'-5' RNA ligase superfamily 11 168 1.1E-11 T 13-10-2018 RPIT_04395 98816a8be96297c80809aa1bf4b05b1b 532 Pfam PF00005 ABC transporter 343 471 7.4E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_04395 98816a8be96297c80809aa1bf4b05b1b 532 SUPERFAMILY SSF52540 330 516 3.83E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04395 98816a8be96297c80809aa1bf4b05b1b 532 ProSitePatterns PS00211 ABC transporters family signature. 443 457 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_04395 98816a8be96297c80809aa1bf4b05b1b 532 Pfam PF00005 ABC transporter 17 187 6.9E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_04395 98816a8be96297c80809aa1bf4b05b1b 532 Gene3D G3DSA:3.40.50.300 291 529 3.2E-51 T 13-10-2018 RPIT_04395 98816a8be96297c80809aa1bf4b05b1b 532 Pfam PF12848 ABC transporter 230 299 1.8E-9 T 13-10-2018 IPR032781 ABC-transporter extension domain RPIT_04395 98816a8be96297c80809aa1bf4b05b1b 532 SMART SM00382 26 231 5.5E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_04395 98816a8be96297c80809aa1bf4b05b1b 532 SMART SM00382 350 517 2.2E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_04395 98816a8be96297c80809aa1bf4b05b1b 532 SUPERFAMILY SSF52540 2 233 3.16E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04395 98816a8be96297c80809aa1bf4b05b1b 532 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_11100 7440e7775b639864d9c4a09a51c758d6 545 Pfam PF00037 4Fe-4S binding domain 516 538 1.3E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIT_11100 7440e7775b639864d9c4a09a51c758d6 545 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 522 533 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIT_11100 7440e7775b639864d9c4a09a51c758d6 545 SUPERFAMILY SSF46548 410 539 6.28E-19 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIT_11100 7440e7775b639864d9c4a09a51c758d6 545 SUPERFAMILY SSF46548 36 136 9.42E-21 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIT_11100 7440e7775b639864d9c4a09a51c758d6 545 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 36 115 2.4E-17 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 RPIT_11100 7440e7775b639864d9c4a09a51c758d6 545 Gene3D G3DSA:3.30.70.20 460 545 1.3E-10 T 13-10-2018 RPIT_11100 7440e7775b639864d9c4a09a51c758d6 545 SUPERFAMILY SSF51971 126 357 7.65E-54 T 13-10-2018 RPIT_11100 7440e7775b639864d9c4a09a51c758d6 545 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 128 398 8.4E-29 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIT_11100 7440e7775b639864d9c4a09a51c758d6 545 Gene3D G3DSA:1.10.1060.10 25 124 1.8E-21 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIT_11100 7440e7775b639864d9c4a09a51c758d6 545 Gene3D G3DSA:3.50.50.60 125 246 2.2E-30 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_11100 7440e7775b639864d9c4a09a51c758d6 545 Gene3D G3DSA:3.50.50.60 253 442 9.3E-24 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_11100 7440e7775b639864d9c4a09a51c758d6 545 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 129 148 1.1E-18 T 13-10-2018 RPIT_11100 7440e7775b639864d9c4a09a51c758d6 545 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 275 1.1E-18 T 13-10-2018 RPIT_11100 7440e7775b639864d9c4a09a51c758d6 545 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 364 1.1E-18 T 13-10-2018 RPIT_11100 7440e7775b639864d9c4a09a51c758d6 545 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 376 398 1.1E-18 T 13-10-2018 RPIT_11100 7440e7775b639864d9c4a09a51c758d6 545 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 386 404 3.6E-14 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIT_11100 7440e7775b639864d9c4a09a51c758d6 545 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 253 277 3.6E-14 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIT_11100 7440e7775b639864d9c4a09a51c758d6 545 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 150 3.6E-14 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIT_14330 5783cc13776f2000e7e7d0fd10f292d9 268 Pfam PF14344 Domain of unknown function (DUF4397) 32 147 4.0E-21 T 13-10-2018 IPR025510 Domain of unknown function DUF4397 RPIT_12330 30dddc3f342a490f33e345c0477fbcc0 314 SUPERFAMILY SSF55120 90 298 5.92E-45 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIT_12330 30dddc3f342a490f33e345c0477fbcc0 314 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIT_12330 30dddc3f342a490f33e345c0477fbcc0 314 Pfam PF00849 RNA pseudouridylate synthase 103 249 2.2E-20 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIT_12330 30dddc3f342a490f33e345c0477fbcc0 314 Gene3D G3DSA:3.30.2350.10 86 299 7.0E-41 T 13-10-2018 RPIT_10685 64033c840b560cc523d19f6c9a2ad050 335 Pfam PF03060 Nitronate monooxygenase 3 331 5.0E-60 T 13-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RPIT_10685 64033c840b560cc523d19f6c9a2ad050 335 Gene3D G3DSA:3.20.20.70 1 334 6.1E-92 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_10685 64033c840b560cc523d19f6c9a2ad050 335 SUPERFAMILY SSF51412 2 319 7.02E-53 T 13-10-2018 RPIT_11480 83875e9504aae823a73265d9a034630e 328 SUPERFAMILY SSF47413 7 65 1.03E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_11480 83875e9504aae823a73265d9a034630e 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 54 6.2E-18 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_11480 83875e9504aae823a73265d9a034630e 328 SMART SM00354 7 77 3.0E-21 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_11480 83875e9504aae823a73265d9a034630e 328 Gene3D G3DSA:3.40.50.2300 86 320 3.6E-57 T 13-10-2018 RPIT_11480 83875e9504aae823a73265d9a034630e 328 Pfam PF13377 Periplasmic binding protein-like domain 174 328 2.6E-35 T 13-10-2018 RPIT_11480 83875e9504aae823a73265d9a034630e 328 Gene3D G3DSA:3.40.50.2300 165 322 3.6E-57 T 13-10-2018 RPIT_11480 83875e9504aae823a73265d9a034630e 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 10 28 - T 13-10-2018 RPIT_11480 83875e9504aae823a73265d9a034630e 328 SUPERFAMILY SSF53822 112 328 6.16E-45 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_11480 83875e9504aae823a73265d9a034630e 328 Gene3D G3DSA:1.10.260.40 6 65 4.0E-20 T 13-10-2018 RPIT_10900 b945dc249da6303617b6ee5f8f42121d 700 Gene3D G3DSA:2.40.40.20 570 699 3.9E-38 T 13-10-2018 RPIT_10900 b945dc249da6303617b6ee5f8f42121d 700 SUPERFAMILY SSF50692 544 694 3.62E-45 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily RPIT_10900 b945dc249da6303617b6ee5f8f42121d 700 Gene3D G3DSA:3.40.50.740 62 540 6.8E-145 T 13-10-2018 RPIT_10900 b945dc249da6303617b6ee5f8f42121d 700 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 51 2.6E-8 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_10900 b945dc249da6303617b6ee5f8f42121d 700 SUPERFAMILY SSF53706 2 569 2.88E-162 T 13-10-2018 RPIT_10900 b945dc249da6303617b6ee5f8f42121d 700 SMART SM00926 1 54 0.0014 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_10900 b945dc249da6303617b6ee5f8f42121d 700 Gene3D G3DSA:2.20.25.90 1 53 2.8E-8 T 13-10-2018 RPIT_10900 b945dc249da6303617b6ee5f8f42121d 700 Gene3D G3DSA:3.40.228.10 135 344 6.8E-145 T 13-10-2018 RPIT_10900 b945dc249da6303617b6ee5f8f42121d 700 Pfam PF00384 Molybdopterin oxidoreductase 57 493 1.3E-65 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_10900 b945dc249da6303617b6ee5f8f42121d 700 Pfam PF01568 Molydopterin dinucleotide binding domain 583 689 1.5E-32 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 RPIT_01080 cda70c97092f00be9d8ca506e1dbddd1 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 6.3E-17 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_01080 cda70c97092f00be9d8ca506e1dbddd1 343 SUPERFAMILY SSF47413 10 67 5.63E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_01080 cda70c97092f00be9d8ca506e1dbddd1 343 Gene3D G3DSA:3.40.50.2300 175 301 1.2E-65 T 13-10-2018 RPIT_01080 cda70c97092f00be9d8ca506e1dbddd1 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 21 31 1.2E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_01080 cda70c97092f00be9d8ca506e1dbddd1 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 11 21 1.2E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_01080 cda70c97092f00be9d8ca506e1dbddd1 343 Gene3D G3DSA:1.10.260.40 9 62 1.8E-21 T 13-10-2018 RPIT_01080 cda70c97092f00be9d8ca506e1dbddd1 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 13-10-2018 RPIT_01080 cda70c97092f00be9d8ca506e1dbddd1 343 Gene3D G3DSA:3.40.50.2300 63 318 1.2E-65 T 13-10-2018 RPIT_01080 cda70c97092f00be9d8ca506e1dbddd1 343 SMART SM00354 9 79 1.3E-25 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_01080 cda70c97092f00be9d8ca506e1dbddd1 343 Pfam PF13377 Periplasmic binding protein-like domain 183 339 3.4E-34 T 13-10-2018 RPIT_01080 cda70c97092f00be9d8ca506e1dbddd1 343 SUPERFAMILY SSF53822 104 342 2.83E-60 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_03795 b6c3b90f12c8f0f506469ed55064b2d3 461 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 8 444 1.2E-210 T 13-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 RPIT_03795 b6c3b90f12c8f0f506469ed55064b2d3 461 SUPERFAMILY SSF51569 6 443 4.69E-190 T 13-10-2018 RPIT_03795 b6c3b90f12c8f0f506469ed55064b2d3 461 Pfam PF01474 Class-II DAHP synthetase family 7 439 4.5E-194 T 13-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 RPIT_03795 b6c3b90f12c8f0f506469ed55064b2d3 461 Gene3D G3DSA:3.20.20.70 192 444 4.4E-106 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_05095 3ab0295287ae314ba6bc3e90c9b7926e 428 PIRSF PIRSF001369 36 428 8.2E-143 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type RPIT_05095 3ab0295287ae314ba6bc3e90c9b7926e 428 SUPERFAMILY SSF48256 2 428 5.1E-148 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 RPIT_05095 3ab0295287ae314ba6bc3e90c9b7926e 428 Gene3D G3DSA:1.10.580.10 56 411 2.2E-129 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 RPIT_05095 3ab0295287ae314ba6bc3e90c9b7926e 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 13-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 RPIT_05095 3ab0295287ae314ba6bc3e90c9b7926e 428 Gene3D G3DSA:1.10.230.10 267 376 2.2E-129 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain RPIT_05095 3ab0295287ae314ba6bc3e90c9b7926e 428 Pfam PF00285 Citrate synthase, C-terminal domain 45 411 5.0E-129 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 RPIT_05095 3ab0295287ae314ba6bc3e90c9b7926e 428 Gene3D G3DSA:2.20.28.60 1 49 1.9E-18 T 13-10-2018 RPIT_05095 3ab0295287ae314ba6bc3e90c9b7926e 428 PRINTS PR00143 Citrate synthase signature 218 233 1.3E-51 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 RPIT_05095 3ab0295287ae314ba6bc3e90c9b7926e 428 PRINTS PR00143 Citrate synthase signature 240 268 1.3E-51 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 RPIT_05095 3ab0295287ae314ba6bc3e90c9b7926e 428 PRINTS PR00143 Citrate synthase signature 296 316 1.3E-51 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 RPIT_05095 3ab0295287ae314ba6bc3e90c9b7926e 428 PRINTS PR00143 Citrate synthase signature 379 393 1.3E-51 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 RPIT_05095 3ab0295287ae314ba6bc3e90c9b7926e 428 PRINTS PR00143 Citrate synthase signature 164 177 1.3E-51 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 RPIT_05095 3ab0295287ae314ba6bc3e90c9b7926e 428 PRINTS PR00143 Citrate synthase signature 359 375 1.3E-51 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 RPIT_05095 3ab0295287ae314ba6bc3e90c9b7926e 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 13 418 6.7E-156 T 13-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 RPIT_11300 896a157e417ae85aed27210449282503 161 Gene3D G3DSA:1.20.58.1290 62 161 4.4E-37 T 13-10-2018 RPIT_11300 896a157e417ae85aed27210449282503 161 Pfam PF02559 CarD-like/TRCF domain 3 112 1.1E-15 T 13-10-2018 IPR003711 CarD-like/TRCF domain RPIT_11300 896a157e417ae85aed27210449282503 161 SUPERFAMILY SSF141259 2 67 1.2E-12 T 13-10-2018 IPR036101 CarD-like/TRCF domain superfamily RPIT_11300 896a157e417ae85aed27210449282503 161 Gene3D G3DSA:2.30.30.840 1 61 3.7E-21 T 13-10-2018 RPIT_11300 896a157e417ae85aed27210449282503 161 SMART SM01058 2 113 2.7E-28 T 13-10-2018 IPR003711 CarD-like/TRCF domain RPIT_12535 2d7b141ea8049ee6ac5f4448ef2c8e3d 326 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 9 311 7.5E-106 T 13-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 RPIT_12535 2d7b141ea8049ee6ac5f4448ef2c8e3d 326 Pfam PF00294 pfkB family carbohydrate kinase 11 306 1.6E-47 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB RPIT_12535 2d7b141ea8049ee6ac5f4448ef2c8e3d 326 SUPERFAMILY SSF53613 8 313 3.12E-70 T 13-10-2018 IPR029056 Ribokinase-like RPIT_12535 2d7b141ea8049ee6ac5f4448ef2c8e3d 326 Gene3D G3DSA:2.20.150.10 17 112 1.7E-91 T 13-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 RPIT_12535 2d7b141ea8049ee6ac5f4448ef2c8e3d 326 Gene3D G3DSA:3.40.1190.20 12 296 1.7E-91 T 13-10-2018 IPR029056 Ribokinase-like RPIT_09040 229ed7018a7c8f8fb59d3139c8274acd 198 Gene3D G3DSA:3.90.1140.10 20 198 6.5E-14 T 13-10-2018 RPIT_09040 229ed7018a7c8f8fb59d3139c8274acd 198 SUPERFAMILY SSF55144 20 187 1.05E-13 T 13-10-2018 IPR009097 Cyclic phosphodiesterase RPIT_14630 99360bfe90ac50a7fe184e493f35f635 263 Pfam PF13614 AAA domain 2 180 2.7E-38 T 13-10-2018 IPR025669 AAA domain RPIT_14630 99360bfe90ac50a7fe184e493f35f635 263 Gene3D G3DSA:3.40.50.300 1 261 2.3E-54 T 13-10-2018 RPIT_14630 99360bfe90ac50a7fe184e493f35f635 263 PIRSF PIRSF009320 93 262 3.9E-7 T 13-10-2018 RPIT_14630 99360bfe90ac50a7fe184e493f35f635 263 PIRSF PIRSF009320 1 74 4.9E-12 T 13-10-2018 RPIT_14630 99360bfe90ac50a7fe184e493f35f635 263 SUPERFAMILY SSF52540 1 254 9.21E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_07765 62083dcee9f33a5ac35c00b60d6b07cd 706 SUPERFAMILY SSF82171 9 419 1.31E-29 T 13-10-2018 RPIT_07765 62083dcee9f33a5ac35c00b60d6b07cd 706 Gene3D G3DSA:2.120.10.30 224 431 8.1E-16 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like RPIT_07765 62083dcee9f33a5ac35c00b60d6b07cd 706 Gene3D G3DSA:2.120.10.30 4 176 6.7E-6 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like RPIT_07765 62083dcee9f33a5ac35c00b60d6b07cd 706 Pfam PF00326 Prolyl oligopeptidase family 480 687 4.5E-38 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RPIT_07765 62083dcee9f33a5ac35c00b60d6b07cd 706 Gene3D G3DSA:3.40.50.1820 432 693 3.1E-59 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_07765 62083dcee9f33a5ac35c00b60d6b07cd 706 SUPERFAMILY SSF53474 435 687 5.71E-60 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_12770 4aba12ded95218839192f5a26fc2725e 99 Gene3D G3DSA:3.30.70.100 1 99 2.0E-22 T 13-10-2018 RPIT_12770 4aba12ded95218839192f5a26fc2725e 99 Pfam PF07876 Stress responsive A/B Barrel Domain 2 98 5.7E-19 T 13-10-2018 IPR013097 Stress responsive alpha-beta barrel RPIT_12770 4aba12ded95218839192f5a26fc2725e 99 SMART SM00886 2 99 3.7E-20 T 13-10-2018 IPR013097 Stress responsive alpha-beta barrel RPIT_12770 4aba12ded95218839192f5a26fc2725e 99 SUPERFAMILY SSF54909 2 98 2.46E-21 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel RPIT_06680 f215ca3304787dc483862b208f6ba43e 264 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 101 261 3.8E-17 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06680 f215ca3304787dc483862b208f6ba43e 264 Hamap MF_01416 ATP synthase subunit delta [atpD]. 88 263 13.47 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06680 f215ca3304787dc483862b208f6ba43e 264 PRINTS PR00125 ATP synthase delta subunit signature 221 236 2.2E-6 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06680 f215ca3304787dc483862b208f6ba43e 264 PRINTS PR00125 ATP synthase delta subunit signature 236 254 2.2E-6 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06680 f215ca3304787dc483862b208f6ba43e 264 Pfam PF00213 ATP synthase delta (OSCP) subunit 101 261 7.8E-26 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 PRINTS PR00681 Ribosomal protein S1 signature 101 120 1.6E-85 T 13-10-2018 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 PRINTS PR00681 Ribosomal protein S1 signature 345 363 1.6E-85 T 13-10-2018 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 PRINTS PR00681 Ribosomal protein S1 signature 35 53 1.6E-85 T 13-10-2018 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 PRINTS PR00681 Ribosomal protein S1 signature 171 191 1.6E-85 T 13-10-2018 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 PRINTS PR00681 Ribosomal protein S1 signature 125 141 1.6E-85 T 13-10-2018 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 PRINTS PR00681 Ribosomal protein S1 signature 53 67 1.6E-85 T 13-10-2018 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 PRINTS PR00681 Ribosomal protein S1 signature 228 249 1.6E-85 T 13-10-2018 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 PRINTS PR00681 Ribosomal protein S1 signature 142 159 1.6E-85 T 13-10-2018 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 PRINTS PR00681 Ribosomal protein S1 signature 306 325 1.6E-85 T 13-10-2018 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 Gene3D G3DSA:2.40.50.140 203 282 2.7E-29 T 13-10-2018 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 SUPERFAMILY SSF50249 31 129 1.0E-20 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 SUPERFAMILY SSF50249 206 286 5.5E-26 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 SUPERFAMILY SSF50249 276 364 1.07E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 Pfam PF00575 S1 RNA binding domain 205 276 3.3E-25 T 13-10-2018 IPR003029 S1 domain GO:0003676 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 Pfam PF00575 S1 RNA binding domain 120 187 1.6E-13 T 13-10-2018 IPR003029 S1 domain GO:0003676 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 Pfam PF00575 S1 RNA binding domain 290 362 1.5E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 Pfam PF00575 S1 RNA binding domain 32 104 1.5E-13 T 13-10-2018 IPR003029 S1 domain GO:0003676 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 Gene3D G3DSA:2.40.50.140 117 198 4.2E-11 T 13-10-2018 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 Gene3D G3DSA:2.40.50.140 23 116 1.5E-21 T 13-10-2018 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 Gene3D G3DSA:2.40.50.140 283 366 4.3E-27 T 13-10-2018 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 SUPERFAMILY SSF50249 107 190 2.0E-14 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 SMART SM00316 33 104 2.3E-15 T 13-10-2018 IPR022967 RNA-binding domain, S1 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 SMART SM00316 291 362 1.8E-24 T 13-10-2018 IPR022967 RNA-binding domain, S1 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 SMART SM00316 206 276 2.9E-26 T 13-10-2018 IPR022967 RNA-binding domain, S1 RPIT_04120 fef6bfd1bf05a647cfbf6104696eadf8 478 SMART SM00316 120 187 4.0E-10 T 13-10-2018 IPR022967 RNA-binding domain, S1 RPIT_11465 10ea0b5ac2463f44182bc2f885063431 297 SUPERFAMILY SSF53474 32 290 1.51E-51 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_11465 10ea0b5ac2463f44182bc2f885063431 297 Pfam PF12146 Serine aminopeptidase, S33 77 182 2.0E-11 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 RPIT_11465 10ea0b5ac2463f44182bc2f885063431 297 Gene3D G3DSA:3.40.50.1820 50 294 1.7E-48 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_11465 10ea0b5ac2463f44182bc2f885063431 297 Pfam PF08386 TAP-like protein 216 289 6.7E-5 T 13-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal RPIT_12250 85e88e2d71188b77ae180eb632ad1b74 362 Gene3D G3DSA:1.20.1250.20 1 353 3.6E-24 T 13-10-2018 RPIT_12250 85e88e2d71188b77ae180eb632ad1b74 362 SUPERFAMILY SSF103473 10 352 4.19E-26 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_03400 66d3870c82faf7e2aa41a944664a5f13 380 Pfam PF13692 Glycosyl transferases group 1 193 326 2.0E-24 T 13-10-2018 RPIT_03400 66d3870c82faf7e2aa41a944664a5f13 380 Pfam PF13439 Glycosyltransferase Family 4 15 177 1.6E-15 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RPIT_03400 66d3870c82faf7e2aa41a944664a5f13 380 SUPERFAMILY SSF53756 2 359 2.63E-60 T 13-10-2018 RPIT_03400 66d3870c82faf7e2aa41a944664a5f13 380 Gene3D G3DSA:3.40.50.2000 1 188 8.5E-19 T 13-10-2018 RPIT_03400 66d3870c82faf7e2aa41a944664a5f13 380 Gene3D G3DSA:3.40.50.2000 189 349 5.0E-31 T 13-10-2018 RPIT_08630 7630efb01daf578fde7659b24547c241 762 Gene3D G3DSA:3.30.565.10 638 760 1.0E-19 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_08630 7630efb01daf578fde7659b24547c241 762 Pfam PF07730 Histidine kinase 563 616 1.7E-7 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RPIT_08630 7630efb01daf578fde7659b24547c241 762 SUPERFAMILY SSF55874 640 760 1.89E-7 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_13385 b470c79e1554e69184d8430261572d2a 305 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 197 225 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIT_13385 b470c79e1554e69184d8430261572d2a 305 Gene3D G3DSA:3.40.50.720 13 304 1.0E-81 T 13-10-2018 RPIT_13385 b470c79e1554e69184d8430261572d2a 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 210 229 3.7E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_13385 b470c79e1554e69184d8430261572d2a 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 190 198 3.7E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_13385 b470c79e1554e69184d8430261572d2a 305 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 146 3.7E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_13385 b470c79e1554e69184d8430261572d2a 305 SUPERFAMILY SSF51735 57 302 2.95E-72 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_13385 b470c79e1554e69184d8430261572d2a 305 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 67 301 1.0E-56 T 13-10-2018 RPIT_13385 b470c79e1554e69184d8430261572d2a 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 231 248 4.6E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_13385 b470c79e1554e69184d8430261572d2a 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 59 76 4.6E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_13385 b470c79e1554e69184d8430261572d2a 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 265 285 4.6E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_13385 b470c79e1554e69184d8430261572d2a 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 146 4.6E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_13385 b470c79e1554e69184d8430261572d2a 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 200 4.6E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_13385 b470c79e1554e69184d8430261572d2a 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 229 4.6E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01275 753531efdca500b9e67c8c5b85cd1ec0 402 Pfam PF07690 Major Facilitator Superfamily 237 397 1.2E-10 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIT_01275 753531efdca500b9e67c8c5b85cd1ec0 402 Gene3D G3DSA:1.20.1250.20 212 385 9.9E-12 T 13-10-2018 RPIT_01275 753531efdca500b9e67c8c5b85cd1ec0 402 SUPERFAMILY SSF103473 9 389 9.55E-30 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_01275 753531efdca500b9e67c8c5b85cd1ec0 402 Gene3D G3DSA:1.20.1250.20 6 186 8.5E-11 T 13-10-2018 RPIT_03340 55864004cfdae51d03466debe8979c66 376 PRINTS PR00702 Acriflavin resistance protein family signature 187 210 2.0E-8 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 RPIT_03340 55864004cfdae51d03466debe8979c66 376 PRINTS PR00702 Acriflavin resistance protein family signature 321 344 2.0E-8 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 RPIT_03340 55864004cfdae51d03466debe8979c66 376 PRINTS PR00702 Acriflavin resistance protein family signature 242 266 2.0E-8 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 RPIT_03340 55864004cfdae51d03466debe8979c66 376 Gene3D G3DSA:1.20.1640.10 187 344 2.6E-88 T 13-10-2018 RPIT_03340 55864004cfdae51d03466debe8979c66 376 SUPERFAMILY SSF82866 130 352 7.06E-46 T 13-10-2018 RPIT_03340 55864004cfdae51d03466debe8979c66 376 SUPERFAMILY SSF82714 47 125 7.32E-6 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIT_03340 55864004cfdae51d03466debe8979c66 376 Gene3D G3DSA:3.30.2090.10 46 128 2.6E-88 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIT_03340 55864004cfdae51d03466debe8979c66 376 Pfam PF00873 AcrB/AcrD/AcrF family 4 347 6.9E-66 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 RPIT_03340 55864004cfdae51d03466debe8979c66 376 Gene3D G3DSA:3.30.70.1440 7 186 2.6E-88 T 13-10-2018 RPIT_06910 3f15d724b3d0fc65bb172a9d83e5418f 445 TIGRFAM TIGR03624 TIGR03624: putative hydrolase 64 419 1.6E-76 T 13-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 RPIT_06910 3f15d724b3d0fc65bb172a9d83e5418f 445 Pfam PF10103 Zincin-like metallopeptidase 64 418 2.8E-89 T 13-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 RPIT_06910 3f15d724b3d0fc65bb172a9d83e5418f 445 SUPERFAMILY SSF55486 64 419 5.13E-75 T 13-10-2018 RPIT_06840 d67f0d87b28e842d5965843e16e7e8ce 274 Pfam PF00005 ABC transporter 21 177 6.8E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_06840 d67f0d87b28e842d5965843e16e7e8ce 274 SUPERFAMILY SSF52540 4 246 1.49E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06840 d67f0d87b28e842d5965843e16e7e8ce 274 Gene3D G3DSA:3.40.50.300 2 267 5.4E-75 T 13-10-2018 RPIT_06840 d67f0d87b28e842d5965843e16e7e8ce 274 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_06840 d67f0d87b28e842d5965843e16e7e8ce 274 SMART SM00382 29 233 3.8E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_12480 ca061559677dfe1352431e6cdbe48bca 158 Pfam PF03703 Bacterial PH domain 73 147 2.5E-5 T 13-10-2018 IPR005182 Domain of unknown function DUF304 RPIT_14265 be86b979ec02bd8fffcc139a580a686b 196 SUPERFAMILY SSF52218 3 177 1.86E-28 T 13-10-2018 IPR029039 Flavoprotein-like superfamily RPIT_14265 be86b979ec02bd8fffcc139a580a686b 196 Pfam PF03358 NADPH-dependent FMN reductase 2 151 4.3E-31 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RPIT_14265 be86b979ec02bd8fffcc139a580a686b 196 Gene3D G3DSA:3.40.50.360 1 178 2.4E-48 T 13-10-2018 IPR029039 Flavoprotein-like superfamily RPIT_14265 be86b979ec02bd8fffcc139a580a686b 196 TIGRFAM TIGR04037 LLM_duo_CE1759: LLM-partnered FMN reductase, CE1759 family 4 187 3.2E-67 T 13-10-2018 IPR023932 Uncharacterised protein family, CE1759 RPIT_11390 c8737a8e42b231ac4f172e42060be97a 441 Gene3D G3DSA:3.40.190.10 164 431 2.8E-122 T 13-10-2018 RPIT_11390 c8737a8e42b231ac4f172e42060be97a 441 Pfam PF01547 Bacterial extracellular solute-binding protein 57 360 3.0E-35 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein RPIT_11390 c8737a8e42b231ac4f172e42060be97a 441 Gene3D G3DSA:3.40.190.10 65 399 2.8E-122 T 13-10-2018 RPIT_11390 c8737a8e42b231ac4f172e42060be97a 441 SUPERFAMILY SSF53850 16 438 5.22E-71 T 13-10-2018 RPIT_06255 d38bed6e9e5790faa82a78f94220f594 407 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 394 8.5E-75 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 RPIT_06255 d38bed6e9e5790faa82a78f94220f594 407 Pfam PF07690 Major Facilitator Superfamily 22 364 6.1E-44 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIT_06255 d38bed6e9e5790faa82a78f94220f594 407 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 87 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIT_06255 d38bed6e9e5790faa82a78f94220f594 407 Gene3D G3DSA:1.20.1720.10 16 396 2.4E-90 T 13-10-2018 RPIT_06255 d38bed6e9e5790faa82a78f94220f594 407 SUPERFAMILY SSF103473 7 399 1.57E-62 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_14790 34f72dc5af5946c80ce6a8caed5ef739 348 Gene3D G3DSA:2.60.40.10 59 172 7.3E-23 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_14790 34f72dc5af5946c80ce6a8caed5ef739 348 Pfam PF16158 Ig-like domain from next to BRCA1 gene 70 164 7.3E-22 T 13-10-2018 IPR032350 Next to BRCA1, central domain RPIT_04320 f60cb907b717a7552dd01f3b4244fa3c 313 Pfam PF02628 Cytochrome oxidase assembly protein 71 285 2.3E-12 T 13-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 RPIT_04320 f60cb907b717a7552dd01f3b4244fa3c 313 Pfam PF02628 Cytochrome oxidase assembly protein 20 63 3.1E-11 T 13-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 RPIT_03865 8a6223e0f3a94e95731abcc30129720d 447 Gene3D G3DSA:1.10.101.10 120 190 8.5E-9 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 RPIT_03865 8a6223e0f3a94e95731abcc30129720d 447 Gene3D G3DSA:2.40.420.20 371 444 3.5E-8 T 13-10-2018 RPIT_03865 8a6223e0f3a94e95731abcc30129720d 447 Pfam PF01471 Putative peptidoglycan binding domain 132 168 2.7E-5 T 13-10-2018 IPR002477 Peptidoglycan binding-like RPIT_03865 8a6223e0f3a94e95731abcc30129720d 447 SUPERFAMILY SSF47090 120 176 6.8E-8 T 13-10-2018 IPR036365 PGBD-like superfamily RPIT_10970 ad7059d76ea6bc88a9696de2d09bd0f4 236 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 37 195 7.4E-41 T 13-10-2018 IPR027414 Glycosyl hydrolase family 95, N-terminal domain KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807 RPIT_10970 ad7059d76ea6bc88a9696de2d09bd0f4 236 Gene3D G3DSA:2.70.98.50 36 208 1.7E-45 T 13-10-2018 RPIT_00860 b40e0e11a8f43e4d118fb21419690652 599 Pfam PF01734 Patatin-like phospholipase 17 361 9.0E-16 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 RPIT_00860 b40e0e11a8f43e4d118fb21419690652 599 SUPERFAMILY SSF52151 161 374 4.97E-9 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RPIT_00860 b40e0e11a8f43e4d118fb21419690652 599 Gene3D G3DSA:3.40.1090.10 210 365 6.6E-6 T 13-10-2018 RPIT_14415 84317a963bff7909fd7a1de37dfd1c2c 363 Pfam PF01548 Transposase 20 164 1.5E-17 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RPIT_14415 84317a963bff7909fd7a1de37dfd1c2c 363 Pfam PF02371 Transposase IS116/IS110/IS902 family 248 323 1.2E-13 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RPIT_02630 24733615ec857432d02374f590e99880 119 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 19 118 1.3E-32 T 13-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02630 24733615ec857432d02374f590e99880 119 Gene3D G3DSA:1.20.58.1610 1 119 1.6E-36 T 13-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_07115 9f93a8a448feb5570c63db9a6b744ffe 475 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 187 207 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 RPIT_07115 9f93a8a448feb5570c63db9a6b744ffe 475 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 10 470 1.2E-119 T 13-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 RPIT_07115 9f93a8a448feb5570c63db9a6b744ffe 475 Pfam PF04055 Radical SAM superfamily 189 359 3.5E-20 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIT_07115 9f93a8a448feb5570c63db9a6b744ffe 475 Gene3D G3DSA:3.80.30.20 182 415 8.1E-68 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe RPIT_07115 9f93a8a448feb5570c63db9a6b744ffe 475 SMART SM00729 183 401 1.5E-39 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 RPIT_07115 9f93a8a448feb5570c63db9a6b744ffe 475 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 182 466 1.9E-77 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 RPIT_07115 9f93a8a448feb5570c63db9a6b744ffe 475 SUPERFAMILY SSF102114 170 404 1.96E-45 T 13-10-2018 RPIT_07115 9f93a8a448feb5570c63db9a6b744ffe 475 Gene3D G3DSA:3.40.50.12160 9 139 1.1E-36 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily RPIT_07115 9f93a8a448feb5570c63db9a6b744ffe 475 Gene3D G3DSA:2.40.50.140 416 475 3.6E-11 T 13-10-2018 RPIT_07115 9f93a8a448feb5570c63db9a6b744ffe 475 Pfam PF00919 Uncharacterized protein family UPF0004 10 108 7.6E-28 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 RPIT_07115 9f93a8a448feb5570c63db9a6b744ffe 475 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 8 474 58.666 T 13-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 RPIT_14155 46e8a16b4fe72767f04b4886a3e05c16 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 117 137 9.5E-6 T 13-10-2018 RPIT_14155 46e8a16b4fe72767f04b4886a3e05c16 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 147 171 9.5E-6 T 13-10-2018 RPIT_14155 46e8a16b4fe72767f04b4886a3e05c16 481 Gene3D G3DSA:1.20.1720.10 23 247 1.0E-42 T 13-10-2018 RPIT_14155 46e8a16b4fe72767f04b4886a3e05c16 481 Pfam PF07690 Major Facilitator Superfamily 28 433 1.2E-42 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIT_14155 46e8a16b4fe72767f04b4886a3e05c16 481 Gene3D G3DSA:1.20.1250.20 282 479 9.5E-11 T 13-10-2018 RPIT_14155 46e8a16b4fe72767f04b4886a3e05c16 481 SUPERFAMILY SSF103473 20 478 1.96E-53 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_03705 48bfd5474f7ce97629b97d1f8833de28 565 Gene3D G3DSA:1.20.810.10 25 466 1.9E-90 T 13-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 RPIT_03705 48bfd5474f7ce97629b97d1f8833de28 565 Pfam PF13631 Cytochrome b(N-terminal)/b6/petB 132 305 1.0E-58 T 13-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 RPIT_03705 48bfd5474f7ce97629b97d1f8833de28 565 SUPERFAMILY SSF81342 31 309 2.35E-61 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 RPIT_09785 3fa23da7ac07b78e1e2fc6abe1d8c63d 316 Gene3D G3DSA:3.40.50.2300 1 272 1.9E-86 T 13-10-2018 RPIT_09785 3fa23da7ac07b78e1e2fc6abe1d8c63d 316 SUPERFAMILY SSF53822 12 222 1.32E-6 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_09785 3fa23da7ac07b78e1e2fc6abe1d8c63d 316 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 1 157 1.3E-31 T 13-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 RPIT_09785 3fa23da7ac07b78e1e2fc6abe1d8c63d 316 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 176 300 1.9E-10 T 13-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 RPIT_09785 3fa23da7ac07b78e1e2fc6abe1d8c63d 316 Gene3D G3DSA:3.40.50.2300 101 308 1.9E-86 T 13-10-2018 RPIT_03245 6b69d2b4db61914e7a976bdfc708be22 379 SUPERFAMILY SSF53613 34 327 8.42E-47 T 13-10-2018 IPR029056 Ribokinase-like RPIT_03245 6b69d2b4db61914e7a976bdfc708be22 379 Gene3D G3DSA:3.40.1190.20 33 335 1.9E-48 T 13-10-2018 IPR029056 Ribokinase-like RPIT_03245 6b69d2b4db61914e7a976bdfc708be22 379 Pfam PF00294 pfkB family carbohydrate kinase 62 316 3.9E-24 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB RPIT_01240 608443420c448fcc09e017e524921a00 274 Pfam PF01061 ABC-2 type transporter 34 237 5.0E-14 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 RPIT_01240 608443420c448fcc09e017e524921a00 274 PIRSF PIRSF006648 10 273 9.0E-21 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 RPIT_01240 608443420c448fcc09e017e524921a00 274 PRINTS PR00164 ABC-2 type transport system membrane protein signature 214 233 2.9E-9 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 RPIT_01240 608443420c448fcc09e017e524921a00 274 PRINTS PR00164 ABC-2 type transport system membrane protein signature 194 213 2.9E-9 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 RPIT_01240 608443420c448fcc09e017e524921a00 274 PRINTS PR00164 ABC-2 type transport system membrane protein signature 41 62 2.9E-9 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 RPIT_08310 30e39df24bd249dfa1ada5286b7f59e3 416 Hamap MF_01697 L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [mshC]. 9 416 49.487 T 13-10-2018 IPR017812 Mycothiol ligase MshC GO:0010125|GO:0035446 RPIT_08310 30e39df24bd249dfa1ada5286b7f59e3 416 Gene3D G3DSA:3.40.50.620 8 333 4.0E-97 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_08310 30e39df24bd249dfa1ada5286b7f59e3 416 SUPERFAMILY SSF52374 34 340 4.29E-66 T 13-10-2018 RPIT_08310 30e39df24bd249dfa1ada5286b7f59e3 416 Gene3D G3DSA:1.20.120.640 334 416 2.7E-18 T 13-10-2018 RPIT_08310 30e39df24bd249dfa1ada5286b7f59e3 416 TIGRFAM TIGR03447 mycothiol_MshC: cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase 3 416 1.9E-182 T 13-10-2018 IPR017812 Mycothiol ligase MshC GO:0010125|GO:0035446 RPIT_08310 30e39df24bd249dfa1ada5286b7f59e3 416 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 41 341 2.7E-81 T 13-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 RPIT_08310 30e39df24bd249dfa1ada5286b7f59e3 416 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 81 90 9.8E-22 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIT_08310 30e39df24bd249dfa1ada5286b7f59e3 416 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 45 56 9.8E-22 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIT_08310 30e39df24bd249dfa1ada5286b7f59e3 416 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 249 270 9.8E-22 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIT_08310 30e39df24bd249dfa1ada5286b7f59e3 416 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 218 236 9.8E-22 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIT_05520 d43e12a63025ad2c545deb98686ee085 216 Gene3D G3DSA:3.40.50.300 1 140 4.4E-18 T 13-10-2018 RPIT_05520 d43e12a63025ad2c545deb98686ee085 216 Pfam PF00265 Thymidine kinase 3 191 2.6E-20 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 RPIT_05520 d43e12a63025ad2c545deb98686ee085 216 Gene3D G3DSA:3.30.60.20 145 193 8.3E-6 T 13-10-2018 RPIT_05520 d43e12a63025ad2c545deb98686ee085 216 PIRSF PIRSF035805 1 204 7.4E-37 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 RPIT_05520 d43e12a63025ad2c545deb98686ee085 216 SUPERFAMILY SSF57716 145 196 2.23E-7 T 13-10-2018 RPIT_05520 d43e12a63025ad2c545deb98686ee085 216 SUPERFAMILY SSF52540 2 140 9.19E-27 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_05960 c410383857574257acd97fc0552e6e8c 512 SUPERFAMILY SSF55205 75 503 2.62E-94 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RPIT_05960 c410383857574257acd97fc0552e6e8c 512 Gene3D G3DSA:3.65.10.10 76 501 1.2E-118 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 RPIT_05960 c410383857574257acd97fc0552e6e8c 512 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 77 494 6.4E-47 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 RPIT_05960 c410383857574257acd97fc0552e6e8c 512 SMART SM00530 11 66 6.8E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_05960 c410383857574257acd97fc0552e6e8c 512 SUPERFAMILY SSF47413 5 64 7.51E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_05960 c410383857574257acd97fc0552e6e8c 512 Gene3D G3DSA:1.10.260.40 2 73 3.0E-16 T 13-10-2018 RPIT_05960 c410383857574257acd97fc0552e6e8c 512 Gene3D G3DSA:3.65.10.10 91 303 1.2E-118 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 RPIT_05960 c410383857574257acd97fc0552e6e8c 512 Pfam PF01381 Helix-turn-helix 12 63 9.2E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_07840 98c7cd4491fcda4f284e8c8e4d9b3396 317 Gene3D G3DSA:1.10.510.10 2 290 2.6E-50 T 13-10-2018 RPIT_07840 98c7cd4491fcda4f284e8c8e4d9b3396 317 SUPERFAMILY SSF56112 5 247 1.03E-56 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily RPIT_07840 98c7cd4491fcda4f284e8c8e4d9b3396 317 Pfam PF00069 Protein kinase domain 11 208 4.3E-33 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RPIT_07840 98c7cd4491fcda4f284e8c8e4d9b3396 317 SMART SM00220 9 252 9.2E-37 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RPIT_07840 98c7cd4491fcda4f284e8c8e4d9b3396 317 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 15 38 - T 13-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 RPIT_07840 98c7cd4491fcda4f284e8c8e4d9b3396 317 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 123 135 - T 13-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RPIT_12415 436fe7e9895f98c17286fc753aa30b99 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 319 3.5E-36 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_12415 436fe7e9895f98c17286fc753aa30b99 321 SUPERFAMILY SSF161098 93 304 4.91E-17 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_12415 436fe7e9895f98c17286fc753aa30b99 321 Gene3D G3DSA:1.10.3720.10 88 314 9.9E-21 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_09300 1cf35676548b7d3fcadc690eeeab3be7 328 Gene3D G3DSA:3.40.50.2000 157 294 7.5E-11 T 13-10-2018 RPIT_09300 1cf35676548b7d3fcadc690eeeab3be7 328 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 225 279 2.3E-6 T 13-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 RPIT_09300 1cf35676548b7d3fcadc690eeeab3be7 328 SUPERFAMILY SSF53756 9 282 7.22E-15 T 13-10-2018 RPIT_10000 f87d077a8712ad7ba16275ad52bbea15 2200 Gene3D G3DSA:2.60.40.10 371 468 7.7E-8 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_06650 3766265cd17f66e0ce53b6ebc2a22f82 197 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 8 183 3.3E-50 T 13-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 RPIT_06650 3766265cd17f66e0ce53b6ebc2a22f82 197 Pfam PF01923 Cobalamin adenosyltransferase 7 178 1.7E-54 T 13-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 RPIT_06650 3766265cd17f66e0ce53b6ebc2a22f82 197 Gene3D G3DSA:1.20.1200.10 28 197 6.8E-54 T 13-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 RPIT_06650 3766265cd17f66e0ce53b6ebc2a22f82 197 SUPERFAMILY SSF89028 6 189 1.94E-54 T 13-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 RPIT_06650 3766265cd17f66e0ce53b6ebc2a22f82 197 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 13 188 4.0E-42 T 13-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 RPIT_02810 88909cb092b8638d179b1996c3f37f2e 135 Pfam PF01575 MaoC like domain 12 99 2.1E-21 T 13-10-2018 IPR002539 MaoC-like dehydratase domain RPIT_02810 88909cb092b8638d179b1996c3f37f2e 135 SUPERFAMILY SSF54637 3 125 8.86E-26 T 13-10-2018 IPR029069 HotDog domain superfamily RPIT_02810 88909cb092b8638d179b1996c3f37f2e 135 Gene3D G3DSA:3.10.129.10 1 135 4.9E-38 T 13-10-2018 RPIT_07360 ad13d72a4bc7d2d4b6834e9f46df5ef3 199 Gene3D G3DSA:3.20.80.10 2 189 5.1E-39 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily RPIT_07360 ad13d72a4bc7d2d4b6834e9f46df5ef3 199 Pfam PF04832 SOUL heme-binding protein 4 182 1.4E-41 T 13-10-2018 IPR006917 SOUL haem-binding protein RPIT_07360 ad13d72a4bc7d2d4b6834e9f46df5ef3 199 SUPERFAMILY SSF55136 3 184 8.63E-47 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily RPIT_07250 662d4d3c2dea93c4acebe0666e1a6c33 206 Gene3D G3DSA:3.40.30.10 60 196 7.7E-24 T 13-10-2018 RPIT_07250 662d4d3c2dea93c4acebe0666e1a6c33 206 SUPERFAMILY SSF52833 50 194 2.61E-22 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_07250 662d4d3c2dea93c4acebe0666e1a6c33 206 Pfam PF00578 AhpC/TSA family 63 180 3.9E-18 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RPIT_03115 12e709ecd031d32a0a7be6ab3c58d67a 336 Gene3D G3DSA:3.40.50.1100 14 305 1.4E-74 T 13-10-2018 RPIT_03115 12e709ecd031d32a0a7be6ab3c58d67a 336 SUPERFAMILY SSF53686 14 316 4.85E-66 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIT_03115 12e709ecd031d32a0a7be6ab3c58d67a 336 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 36 54 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 RPIT_03115 12e709ecd031d32a0a7be6ab3c58d67a 336 Gene3D G3DSA:3.40.50.1100 48 154 1.4E-74 T 13-10-2018 RPIT_03115 12e709ecd031d32a0a7be6ab3c58d67a 336 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 14 298 4.3E-46 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme RPIT_05200 5228cd721f0a70e60759e0f00a737860 81 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 38 76 2.0E-12 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 RPIT_05200 5228cd721f0a70e60759e0f00a737860 81 SUPERFAMILY SSF47336 3 79 1.09E-21 T 13-10-2018 IPR036736 ACP-like superfamily RPIT_05200 5228cd721f0a70e60759e0f00a737860 81 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 5 78 2.8E-23 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 RPIT_05200 5228cd721f0a70e60759e0f00a737860 81 Gene3D G3DSA:1.10.1200.10 2 79 6.4E-26 T 13-10-2018 IPR036736 ACP-like superfamily RPIT_05200 5228cd721f0a70e60759e0f00a737860 81 Pfam PF00550 Phosphopantetheine attachment site 10 76 7.8E-16 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain RPIT_05200 5228cd721f0a70e60759e0f00a737860 81 Hamap MF_01217 Acyl carrier protein [acpP]. 6 80 17.911 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 RPIT_06965 5270286f73dd4ee9f4cc967e9db72ab1 280 Gene3D G3DSA:3.10.129.90 2 277 7.4E-88 T 13-10-2018 RPIT_06965 5270286f73dd4ee9f4cc967e9db72ab1 280 Pfam PF13622 Thioesterase-like superfamily 32 275 9.1E-56 T 13-10-2018 RPIT_06965 5270286f73dd4ee9f4cc967e9db72ab1 280 SUPERFAMILY SSF54637 117 276 5.79E-42 T 13-10-2018 IPR029069 HotDog domain superfamily RPIT_06965 5270286f73dd4ee9f4cc967e9db72ab1 280 SUPERFAMILY SSF54637 5 114 2.06E-36 T 13-10-2018 IPR029069 HotDog domain superfamily RPIT_14185 5152f731ea0dc40d364b445b98919f18 326 Gene3D G3DSA:3.40.50.2020 7 298 1.0E-99 T 13-10-2018 RPIT_14185 5152f731ea0dc40d364b445b98919f18 326 SMART SM01400 4 120 1.2E-55 T 13-10-2018 RPIT_14185 5152f731ea0dc40d364b445b98919f18 326 Gene3D G3DSA:3.40.50.2020 147 286 1.0E-99 T 13-10-2018 RPIT_14185 5152f731ea0dc40d364b445b98919f18 326 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 309 4.0E-19 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 RPIT_14185 5152f731ea0dc40d364b445b98919f18 326 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 120 8.7E-37 T 13-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 RPIT_14185 5152f731ea0dc40d364b445b98919f18 326 SUPERFAMILY SSF53271 69 301 6.21E-49 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like RPIT_14185 5152f731ea0dc40d364b445b98919f18 326 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 310 1.1E-96 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 Gene3D G3DSA:3.30.70.870 295 376 1.3E-35 T 13-10-2018 RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 Gene3D G3DSA:3.40.50.300 10 194 7.6E-69 T 13-10-2018 RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 Pfam PF00009 Elongation factor Tu GTP binding domain 14 190 2.1E-51 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 TIGRFAM TIGR01393 lepA: elongation factor 4 14 603 5.9E-290 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 Gene3D G3DSA:2.40.30.10 195 294 3.2E-32 T 13-10-2018 RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 Pfam PF00679 Elongation factor G C-terminus 407 493 1.1E-20 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 Gene3D G3DSA:3.30.70.3380 377 486 1.9E-38 T 13-10-2018 RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 SMART SM00838 406 494 0.0093 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 SUPERFAMILY SSF50447 191 294 1.79E-17 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 Pfam PF06421 GTP-binding protein LepA C-terminus 497 601 8.7E-49 T 13-10-2018 IPR013842 GTP-binding protein LepA, C-terminal RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 PRINTS PR00315 GTP-binding elongation factor signature 16 29 1.2E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 PRINTS PR00315 GTP-binding elongation factor signature 135 144 1.2E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 PRINTS PR00315 GTP-binding elongation factor signature 99 110 1.2E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 PRINTS PR00315 GTP-binding elongation factor signature 83 93 1.2E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 PRINTS PR00315 GTP-binding elongation factor signature 59 67 1.2E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 SUPERFAMILY SSF54980 407 502 5.28E-22 T 13-10-2018 IPR035647 EF-G domain III/V-like RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 184 1.8E-18 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 Hamap MF_00071 Elongation factor 4 [lepA]. 1 606 284.308 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 SUPERFAMILY SSF52540 13 214 4.67E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 Gene3D G3DSA:3.30.70.2570 488 562 1.1E-32 T 13-10-2018 IPR038363 LepA, C-terminal domain superfamily RPIT_04865 e80bf739c7aef1b8810b17ac6259e18c 609 SUPERFAMILY SSF54980 300 379 4.68E-19 T 13-10-2018 IPR035647 EF-G domain III/V-like RPIT_07985 931bbde62dda8d03efcce33bbf2259a2 253 SUPERFAMILY SSF51366 4 253 8.63E-78 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 RPIT_07985 931bbde62dda8d03efcce33bbf2259a2 253 Pfam PF00977 Histidine biosynthesis protein 6 236 5.2E-81 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 RPIT_07985 931bbde62dda8d03efcce33bbf2259a2 253 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 253 1.9E-103 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 RPIT_07985 931bbde62dda8d03efcce33bbf2259a2 253 Gene3D G3DSA:3.20.20.70 1 253 8.3E-98 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_07985 931bbde62dda8d03efcce33bbf2259a2 253 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 253 45.506 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 RPIT_10405 1f4fe9fea0d66949bd630b4bece2c64c 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 2.5E-11 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 RPIT_10405 1f4fe9fea0d66949bd630b4bece2c64c 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 2.5E-11 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 RPIT_10405 1f4fe9fea0d66949bd630b4bece2c64c 166 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 2.5E-11 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 RPIT_10405 1f4fe9fea0d66949bd630b4bece2c64c 166 SUPERFAMILY SSF46785 9 68 1.57E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_10405 1f4fe9fea0d66949bd630b4bece2c64c 166 Pfam PF13404 AsnC-type helix-turn-helix domain 9 50 5.1E-16 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 RPIT_10405 1f4fe9fea0d66949bd630b4bece2c64c 166 Gene3D G3DSA:1.10.10.10 2 62 2.8E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_10405 1f4fe9fea0d66949bd630b4bece2c64c 166 SUPERFAMILY SSF54909 72 150 6.97E-14 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel RPIT_10405 1f4fe9fea0d66949bd630b4bece2c64c 166 Gene3D G3DSA:3.30.70.920 63 145 3.9E-18 T 13-10-2018 RPIT_10405 1f4fe9fea0d66949bd630b4bece2c64c 166 Pfam PF01037 Lrp/AsnC ligand binding domain 76 147 8.7E-15 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIT_10405 1f4fe9fea0d66949bd630b4bece2c64c 166 SMART SM00344 9 118 3.9E-27 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RPIT_00630 7d117c71d64470c13e367b50e1645baf 445 Pfam PF02386 Cation transport protein 42 427 8.8E-54 T 13-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 RPIT_00175 113af35f9c714a20f34976655a241ea4 709 Gene3D G3DSA:3.90.920.30 16 294 1.4E-91 T 13-10-2018 RPIT_00175 113af35f9c714a20f34976655a241ea4 709 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 14 253 3.3E-67 T 13-10-2018 IPR014145 DNA ligase D, polymerase domain RPIT_00175 113af35f9c714a20f34976655a241ea4 709 Gene3D G3DSA:3.30.470.30 353 546 2.1E-42 T 13-10-2018 RPIT_00175 113af35f9c714a20f34976655a241ea4 709 Pfam PF01068 ATP dependent DNA ligase domain 356 546 2.1E-39 T 13-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 RPIT_00175 113af35f9c714a20f34976655a241ea4 709 Pfam PF04679 ATP dependent DNA ligase C terminal region 565 686 1.4E-12 T 13-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 RPIT_00175 113af35f9c714a20f34976655a241ea4 709 Gene3D G3DSA:2.40.50.140 548 694 2.1E-30 T 13-10-2018 RPIT_00175 113af35f9c714a20f34976655a241ea4 709 SUPERFAMILY SSF56091 352 545 1.44E-42 T 13-10-2018 RPIT_00175 113af35f9c714a20f34976655a241ea4 709 SUPERFAMILY SSF50249 549 695 6.85E-12 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_03485 eae7d14a7a531a62cdddcaf884505393 267 Pfam PF01841 Transglutaminase-like superfamily 122 209 4.8E-18 T 13-10-2018 IPR002931 Transglutaminase-like RPIT_03485 eae7d14a7a531a62cdddcaf884505393 267 Gene3D G3DSA:2.60.40.2250 13 238 2.4E-63 T 13-10-2018 RPIT_03485 eae7d14a7a531a62cdddcaf884505393 267 Gene3D G3DSA:3.10.620.30 81 231 2.4E-63 T 13-10-2018 RPIT_03485 eae7d14a7a531a62cdddcaf884505393 267 SUPERFAMILY SSF54001 96 248 3.08E-30 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily RPIT_03485 eae7d14a7a531a62cdddcaf884505393 267 SMART SM00460 151 211 1.9E-10 T 13-10-2018 IPR002931 Transglutaminase-like RPIT_13225 08b4384e4b32b714f7d04cde2724fb2b 643 Gene3D G3DSA:3.90.1310.30 151 333 4.5E-14 T 13-10-2018 RPIT_13225 08b4384e4b32b714f7d04cde2724fb2b 643 SUPERFAMILY SSF56519 152 313 1.44E-15 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 RPIT_13225 08b4384e4b32b714f7d04cde2724fb2b 643 Pfam PF03717 Penicillin-binding Protein dimerisation domain 159 309 1.5E-10 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RPIT_13225 08b4384e4b32b714f7d04cde2724fb2b 643 Gene3D G3DSA:3.40.710.10 345 641 2.1E-57 T 13-10-2018 RPIT_13225 08b4384e4b32b714f7d04cde2724fb2b 643 Pfam PF00905 Penicillin binding protein transpeptidase domain 370 638 5.8E-34 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RPIT_13225 08b4384e4b32b714f7d04cde2724fb2b 643 SUPERFAMILY SSF56601 289 640 1.88E-52 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like RPIT_00295 689750941a4db584aea73a5ee301ef81 68 Gene3D G3DSA:1.10.260.40 3 66 2.0E-20 T 13-10-2018 RPIT_00295 689750941a4db584aea73a5ee301ef81 68 SMART SM00530 6 61 2.0E-13 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_00295 689750941a4db584aea73a5ee301ef81 68 Pfam PF01381 Helix-turn-helix 8 59 2.1E-15 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_00295 689750941a4db584aea73a5ee301ef81 68 SUPERFAMILY SSF47413 2 65 2.39E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_04300 995c475800a8eee0b8fca032d988dc5c 306 Gene3D G3DSA:1.10.357.140 28 176 2.8E-19 T 13-10-2018 RPIT_04300 995c475800a8eee0b8fca032d988dc5c 306 Pfam PF01040 UbiA prenyltransferase family 33 288 4.2E-67 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 RPIT_04300 995c475800a8eee0b8fca032d988dc5c 306 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 19 302 7.9E-99 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 RPIT_04300 995c475800a8eee0b8fca032d988dc5c 306 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 17 304 19.506 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 RPIT_05030 a15fc670770681c7765b0426e72bda69 248 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 62 234 8.6E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_05030 a15fc670770681c7765b0426e72bda69 248 Gene3D G3DSA:1.10.3720.10 1 236 1.3E-52 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_05030 a15fc670770681c7765b0426e72bda69 248 SUPERFAMILY SSF161098 1 248 3.4E-59 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_07470 d655e0a4d280dc933850287bed8bae18 555 Pfam PF00128 Alpha amylase, catalytic domain 39 398 2.6E-74 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_07470 d655e0a4d280dc933850287bed8bae18 555 SMART SM00642 24 425 8.0E-110 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_07470 d655e0a4d280dc933850287bed8bae18 555 Gene3D G3DSA:3.20.20.80 16 481 8.1E-141 T 13-10-2018 RPIT_07470 d655e0a4d280dc933850287bed8bae18 555 Pfam PF11941 Domain of unknown function (DUF3459) 472 553 6.8E-9 T 13-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) RPIT_07470 d655e0a4d280dc933850287bed8bae18 555 SUPERFAMILY SSF51445 14 486 1.64E-120 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_07470 d655e0a4d280dc933850287bed8bae18 555 Gene3D G3DSA:3.90.400.10 116 193 8.1E-141 T 13-10-2018 RPIT_12490 f88c412b85bfcda8a0ad59d4a792118d 300 SMART SM00382 26 203 1.1E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_12490 f88c412b85bfcda8a0ad59d4a792118d 300 Pfam PF00005 ABC transporter 17 156 1.2E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_12490 f88c412b85bfcda8a0ad59d4a792118d 300 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_12490 f88c412b85bfcda8a0ad59d4a792118d 300 SUPERFAMILY SSF52540 2 224 3.45E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_12490 f88c412b85bfcda8a0ad59d4a792118d 300 Gene3D G3DSA:3.40.50.300 1 247 2.0E-54 T 13-10-2018 RPIT_02125 56044aaaca9fe399ec843a15340a53c0 184 SUPERFAMILY SSF53448 5 135 1.99E-21 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_02125 56044aaaca9fe399ec843a15340a53c0 184 Pfam PF12804 MobA-like NTP transferase domain 6 154 6.0E-28 T 13-10-2018 IPR025877 MobA-like NTP transferase RPIT_02125 56044aaaca9fe399ec843a15340a53c0 184 Gene3D G3DSA:3.90.550.10 5 183 9.0E-32 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_00055 3516a0035601a4e47e46e889aa7343b5 119 Pfam PF00364 Biotin-requiring enzyme 56 118 1.1E-18 T 13-10-2018 IPR000089 Biotin/lipoyl attachment RPIT_00055 3516a0035601a4e47e46e889aa7343b5 119 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 76 93 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RPIT_00055 3516a0035601a4e47e46e889aa7343b5 119 Gene3D G3DSA:2.40.50.100 47 119 6.6E-26 T 13-10-2018 RPIT_00055 3516a0035601a4e47e46e889aa7343b5 119 SUPERFAMILY SSF51230 50 118 1.96E-22 T 13-10-2018 IPR011053 Single hybrid motif RPIT_06225 47a1744ba077fa5a7a1082762a6910b5 367 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 59 354 6.9E-51 T 13-10-2018 IPR003770 Endolytic murein transglycosylase RPIT_06225 47a1744ba077fa5a7a1082762a6910b5 367 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 20 358 29.94 T 13-10-2018 IPR003770 Endolytic murein transglycosylase RPIT_06225 47a1744ba077fa5a7a1082762a6910b5 367 Pfam PF02618 YceG-like family 65 354 2.6E-67 T 13-10-2018 IPR003770 Endolytic murein transglycosylase RPIT_06225 47a1744ba077fa5a7a1082762a6910b5 367 Gene3D G3DSA:1.10.8.1150 59 129 3.9E-8 T 13-10-2018 RPIT_07670 3f1addd7a25029a88b709fedf5882efb 241 SUPERFAMILY SSF161111 23 205 4.58E-33 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily RPIT_07670 3f1addd7a25029a88b709fedf5882efb 241 Pfam PF01545 Cation efflux family 31 202 8.9E-11 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIT_07670 3f1addd7a25029a88b709fedf5882efb 241 Gene3D G3DSA:1.20.1510.10 25 207 1.6E-17 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily RPIT_01970 c8a852c57cd7451e22ac644b087fe435 226 Pfam PF01903 CbiX 9 108 1.5E-7 T 13-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 RPIT_01970 c8a852c57cd7451e22ac644b087fe435 226 SUPERFAMILY SSF53800 3 111 2.45E-14 T 13-10-2018 RPIT_01970 c8a852c57cd7451e22ac644b087fe435 226 Gene3D G3DSA:3.40.50.1400 2 116 1.9E-17 T 13-10-2018 RPIT_12400 545f6ed39a5dfe3a6a25bbe369fb7ac0 305 SMART SM01130 3 302 4.1E-79 T 13-10-2018 IPR002220 DapA-like GO:0016829 RPIT_12400 545f6ed39a5dfe3a6a25bbe369fb7ac0 305 SUPERFAMILY SSF51569 1 304 1.67E-78 T 13-10-2018 RPIT_12400 545f6ed39a5dfe3a6a25bbe369fb7ac0 305 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 13-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 RPIT_12400 545f6ed39a5dfe3a6a25bbe369fb7ac0 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 5.8E-7 T 13-10-2018 IPR002220 DapA-like GO:0016829 RPIT_12400 545f6ed39a5dfe3a6a25bbe369fb7ac0 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 5.8E-7 T 13-10-2018 IPR002220 DapA-like GO:0016829 RPIT_12400 545f6ed39a5dfe3a6a25bbe369fb7ac0 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 5.8E-7 T 13-10-2018 IPR002220 DapA-like GO:0016829 RPIT_12400 545f6ed39a5dfe3a6a25bbe369fb7ac0 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 5.8E-7 T 13-10-2018 IPR002220 DapA-like GO:0016829 RPIT_12400 545f6ed39a5dfe3a6a25bbe369fb7ac0 305 Pfam PF00701 Dihydrodipicolinate synthetase family 3 299 1.6E-48 T 13-10-2018 IPR002220 DapA-like GO:0016829 RPIT_12400 545f6ed39a5dfe3a6a25bbe369fb7ac0 305 PIRSF PIRSF001365 1 305 3.3E-78 T 13-10-2018 IPR002220 DapA-like GO:0016829 RPIT_12400 545f6ed39a5dfe3a6a25bbe369fb7ac0 305 Gene3D G3DSA:3.20.20.70 1 304 6.1E-91 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_00015 86f952ac1c944bcf8c33cd19cf22b3da 437 Pfam PF00009 Elongation factor Tu GTP binding domain 4 201 2.7E-39 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_00015 86f952ac1c944bcf8c33cd19cf22b3da 437 Gene3D G3DSA:3.40.50.300 2 212 2.7E-63 T 13-10-2018 RPIT_00015 86f952ac1c944bcf8c33cd19cf22b3da 437 SUPERFAMILY SSF50465 314 416 3.02E-26 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RPIT_00015 86f952ac1c944bcf8c33cd19cf22b3da 437 PRINTS PR00315 GTP-binding elongation factor signature 6 19 8.4E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_00015 86f952ac1c944bcf8c33cd19cf22b3da 437 PRINTS PR00315 GTP-binding elongation factor signature 85 95 8.4E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_00015 86f952ac1c944bcf8c33cd19cf22b3da 437 PRINTS PR00315 GTP-binding elongation factor signature 101 112 8.4E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_00015 86f952ac1c944bcf8c33cd19cf22b3da 437 PRINTS PR00315 GTP-binding elongation factor signature 65 73 8.4E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_00015 86f952ac1c944bcf8c33cd19cf22b3da 437 PRINTS PR00315 GTP-binding elongation factor signature 138 147 8.4E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIT_00015 86f952ac1c944bcf8c33cd19cf22b3da 437 Gene3D G3DSA:2.40.30.10 312 416 2.6E-29 T 13-10-2018 RPIT_00015 86f952ac1c944bcf8c33cd19cf22b3da 437 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 5 415 1.4E-156 T 13-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 RPIT_00015 86f952ac1c944bcf8c33cd19cf22b3da 437 Gene3D G3DSA:2.40.30.10 215 310 4.7E-22 T 13-10-2018 RPIT_00015 86f952ac1c944bcf8c33cd19cf22b3da 437 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site RPIT_00015 86f952ac1c944bcf8c33cd19cf22b3da 437 SUPERFAMILY SSF52540 3 208 2.16E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_00015 86f952ac1c944bcf8c33cd19cf22b3da 437 SUPERFAMILY SSF50447 217 309 2.14E-17 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily RPIT_06690 823a3ca0fe1d4a7a95dcdf35b70ad937 72 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 18 72 2.7E-12 T 13-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RPIT_06690 823a3ca0fe1d4a7a95dcdf35b70ad937 72 Pfam PF00137 ATP synthase subunit C 16 72 2.6E-7 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RPIT_06690 823a3ca0fe1d4a7a95dcdf35b70ad937 72 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 72 12.829 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06690 823a3ca0fe1d4a7a95dcdf35b70ad937 72 ProSitePatterns PS00605 ATP synthase c subunit signature. 38 59 - T 13-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06690 823a3ca0fe1d4a7a95dcdf35b70ad937 72 SUPERFAMILY SSF81333 11 72 7.06E-13 T 13-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily RPIT_06690 823a3ca0fe1d4a7a95dcdf35b70ad937 72 PRINTS PR00124 ATP synthase C subunit signature 31 46 5.0E-14 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06690 823a3ca0fe1d4a7a95dcdf35b70ad937 72 PRINTS PR00124 ATP synthase C subunit signature 10 29 5.0E-14 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06690 823a3ca0fe1d4a7a95dcdf35b70ad937 72 PRINTS PR00124 ATP synthase C subunit signature 48 72 5.0E-14 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_06690 823a3ca0fe1d4a7a95dcdf35b70ad937 72 Gene3D G3DSA:1.20.20.10 10 72 8.7E-16 T 13-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RPIT_13610 1f20bb33a553925aa90b3f1be4ea6856 86 Pfam PF02583 Metal-sensitive transcriptional repressor 9 79 2.4E-22 T 13-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 RPIT_13610 1f20bb33a553925aa90b3f1be4ea6856 86 Gene3D G3DSA:1.20.58.1000 4 85 1.4E-21 T 13-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily RPIT_02355 fc71dc1f9b5ffc2ab99167ae2936da8a 314 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_02355 fc71dc1f9b5ffc2ab99167ae2936da8a 314 SUPERFAMILY SSF52540 23 239 4.94E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_02355 fc71dc1f9b5ffc2ab99167ae2936da8a 314 SMART SM00382 50 249 1.0E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_02355 fc71dc1f9b5ffc2ab99167ae2936da8a 314 Gene3D G3DSA:3.40.50.300 27 288 8.2E-62 T 13-10-2018 RPIT_02355 fc71dc1f9b5ffc2ab99167ae2936da8a 314 Pfam PF00005 ABC transporter 41 189 3.8E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_01735 67f33985250159a9b72e25c0127028b1 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 180 0.0018 T 13-10-2018 RPIT_01735 67f33985250159a9b72e25c0127028b1 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.2E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01735 67f33985250159a9b72e25c0127028b1 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.2E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01735 67f33985250159a9b72e25c0127028b1 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.2E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01735 67f33985250159a9b72e25c0127028b1 253 Pfam PF00106 short chain dehydrogenase 5 192 1.1E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01735 67f33985250159a9b72e25c0127028b1 253 SUPERFAMILY SSF51735 2 248 3.25E-64 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_01735 67f33985250159a9b72e25c0127028b1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 9.3E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01735 67f33985250159a9b72e25c0127028b1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 9.3E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01735 67f33985250159a9b72e25c0127028b1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 9.3E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01735 67f33985250159a9b72e25c0127028b1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 9.3E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01735 67f33985250159a9b72e25c0127028b1 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 9.3E-22 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01735 67f33985250159a9b72e25c0127028b1 253 Gene3D G3DSA:3.40.50.720 1 244 1.1E-63 T 13-10-2018 RPIT_01735 67f33985250159a9b72e25c0127028b1 253 PIRSF PIRSF000126 1 250 3.2E-75 T 13-10-2018 RPIT_11640 92d8ce4ce588366ab02e855890b0b3af 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 127 305 7.6E-14 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_11640 92d8ce4ce588366ab02e855890b0b3af 312 Gene3D G3DSA:1.10.3720.10 20 304 1.0E-69 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_11640 92d8ce4ce588366ab02e855890b0b3af 312 SUPERFAMILY SSF161098 28 312 6.21E-55 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_11470 8217081ad1ea127d1651008453b283ae 349 Pfam PF03099 Biotin/lipoate A/B protein ligase family 152 263 3.9E-10 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 RPIT_11470 8217081ad1ea127d1651008453b283ae 349 Gene3D G3DSA:3.30.930.10 103 347 6.4E-55 T 13-10-2018 RPIT_11470 8217081ad1ea127d1651008453b283ae 349 SUPERFAMILY SSF55681 98 345 8.52E-66 T 13-10-2018 RPIT_11470 8217081ad1ea127d1651008453b283ae 349 Gene3D G3DSA:3.30.390.50 1 88 1.1E-17 T 13-10-2018 RPIT_08900 7e91305231c7e3cf3559bc66b262834a 543 Gene3D G3DSA:3.90.180.10 1 193 5.6E-32 T 13-10-2018 RPIT_08900 7e91305231c7e3cf3559bc66b262834a 543 Gene3D G3DSA:3.40.50.720 307 441 1.6E-14 T 13-10-2018 RPIT_08900 7e91305231c7e3cf3559bc66b262834a 543 Gene3D G3DSA:3.90.180.10 442 479 1.6E-14 T 13-10-2018 RPIT_08900 7e91305231c7e3cf3559bc66b262834a 543 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 150 4.6E-13 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIT_08900 7e91305231c7e3cf3559bc66b262834a 543 SUPERFAMILY SSF51735 300 463 9.29E-12 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_08900 7e91305231c7e3cf3559bc66b262834a 543 SUPERFAMILY SSF50129 3 154 1.48E-26 T 13-10-2018 IPR011032 GroES-like superfamily RPIT_08890 20732881e0fbf519cd4fcc3347a97844 435 SUPERFAMILY SSF103473 28 420 1.09E-31 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_08890 20732881e0fbf519cd4fcc3347a97844 435 Gene3D G3DSA:1.20.1250.20 28 417 2.0E-28 T 13-10-2018 RPIT_08890 20732881e0fbf519cd4fcc3347a97844 435 Pfam PF07690 Major Facilitator Superfamily 31 320 1.5E-13 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIT_13780 61a5e05264afdeadf0627d19e8494719 317 Gene3D G3DSA:3.40.50.720 4 293 1.2E-92 T 13-10-2018 RPIT_13780 61a5e05264afdeadf0627d19e8494719 317 SUPERFAMILY SSF51735 2 309 7.34E-85 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_13780 61a5e05264afdeadf0627d19e8494719 317 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIT_13780 61a5e05264afdeadf0627d19e8494719 317 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 235 3.2E-57 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 RPIT_13780 61a5e05264afdeadf0627d19e8494719 317 Gene3D G3DSA:3.90.25.10 170 305 1.2E-92 T 13-10-2018 RPIT_01395 46eec9abf1d29ae3aedc07d6605e26cf 247 Pfam PF08241 Methyltransferase domain 32 109 2.6E-6 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 RPIT_01395 46eec9abf1d29ae3aedc07d6605e26cf 247 Gene3D G3DSA:3.40.50.150 9 204 1.9E-11 T 13-10-2018 RPIT_01395 46eec9abf1d29ae3aedc07d6605e26cf 247 SUPERFAMILY SSF53335 33 167 5.07E-14 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_01375 0a6110e7da4a13af91835df95fbf4689 140 SUPERFAMILY SSF52833 12 130 7.66E-25 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_01375 0a6110e7da4a13af91835df95fbf4689 140 Gene3D G3DSA:3.40.30.10 4 137 3.7E-25 T 13-10-2018 RPIT_01375 0a6110e7da4a13af91835df95fbf4689 140 ProSitePatterns PS00194 Thioredoxin family active site. 30 48 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 RPIT_01375 0a6110e7da4a13af91835df95fbf4689 140 Pfam PF08534 Redoxin 6 127 2.1E-13 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 RPIT_09390 2c86bdb97f4d2d494aa80ea43fcf6b40 330 Pfam PF07751 Abi-like protein 48 257 2.2E-22 T 13-10-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like RPIT_11645 55bebfe7c428395c9f5d4a644365799e 294 SUPERFAMILY SSF161098 50 278 8.76E-49 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_11645 55bebfe7c428395c9f5d4a644365799e 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 288 5.4E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_11645 55bebfe7c428395c9f5d4a644365799e 294 Gene3D G3DSA:1.10.3720.10 46 294 2.3E-61 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_12475 4e69fd411de34e8fb9e403dacd88bda3 133 Gene3D G3DSA:1.20.120.330 7 130 1.1E-5 T 13-10-2018 RPIT_05120 9dc213922ee34d51934b941f463daaf9 283 SUPERFAMILY SSF88659 208 266 2.8E-8 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like RPIT_05120 9dc213922ee34d51934b941f463daaf9 283 Gene3D G3DSA:1.20.120.1810 19 128 2.3E-6 T 13-10-2018 RPIT_05120 9dc213922ee34d51934b941f463daaf9 283 SUPERFAMILY SSF88946 31 124 3.79E-10 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_05120 9dc213922ee34d51934b941f463daaf9 283 Pfam PF04542 Sigma-70 region 2 78 124 1.2E-7 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_05120 9dc213922ee34d51934b941f463daaf9 283 Gene3D G3DSA:1.10.10.10 207 271 8.8E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_05120 9dc213922ee34d51934b941f463daaf9 283 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 65 259 1.4E-12 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 RPIT_05120 9dc213922ee34d51934b941f463daaf9 283 Pfam PF04545 Sigma-70, region 4 210 256 1.5E-9 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 RPIT_07835 5d94c66eb968a89f0c496bdb3923df0b 666 Gene3D G3DSA:3.40.50.410 33 223 1.5E-29 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily RPIT_07835 5d94c66eb968a89f0c496bdb3923df0b 666 Pfam PF00092 von Willebrand factor type A domain 36 215 4.6E-8 T 13-10-2018 IPR002035 von Willebrand factor, type A RPIT_07835 5d94c66eb968a89f0c496bdb3923df0b 666 SUPERFAMILY SSF53300 35 218 3.48E-21 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily RPIT_07835 5d94c66eb968a89f0c496bdb3923df0b 666 SMART SM00327 33 221 2.5E-12 T 13-10-2018 IPR002035 von Willebrand factor, type A RPIT_10570 d4deba8853d84a09afec3ac507260ca3 167 Gene3D G3DSA:1.10.287.180 7 79 2.1E-28 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 RPIT_10570 d4deba8853d84a09afec3ac507260ca3 167 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 86 165 1.6E-16 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RPIT_10570 d4deba8853d84a09afec3ac507260ca3 167 Gene3D G3DSA:3.10.50.30 82 166 1.0E-11 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 RPIT_10570 d4deba8853d84a09afec3ac507260ca3 167 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 129 145 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RPIT_10570 d4deba8853d84a09afec3ac507260ca3 167 Pfam PF03449 Transcription elongation factor, N-terminal 9 79 5.7E-30 T 13-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RPIT_10570 d4deba8853d84a09afec3ac507260ca3 167 SUPERFAMILY SSF54534 86 165 3.79E-12 T 13-10-2018 RPIT_10570 d4deba8853d84a09afec3ac507260ca3 167 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 10 164 2.5E-46 T 13-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 RPIT_10570 d4deba8853d84a09afec3ac507260ca3 167 PIRSF PIRSF006092 4 167 1.8E-38 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 RPIT_10570 d4deba8853d84a09afec3ac507260ca3 167 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 22 53 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RPIT_10570 d4deba8853d84a09afec3ac507260ca3 167 Hamap MF_00105 Transcription elongation factor GreA [greA]. 7 165 27.645 T 13-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 RPIT_10570 d4deba8853d84a09afec3ac507260ca3 167 SUPERFAMILY SSF46557 8 80 9.81E-25 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 RPIT_08940 942b76494911d434c8873d20be608977 178 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 4 175 33.262 T 13-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 RPIT_08940 942b76494911d434c8873d20be608977 178 Gene3D G3DSA:3.40.50.2020 1 178 6.3E-54 T 13-10-2018 RPIT_08940 942b76494911d434c8873d20be608977 178 Pfam PF00156 Phosphoribosyl transferase domain 13 146 1.8E-17 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIT_08940 942b76494911d434c8873d20be608977 178 SUPERFAMILY SSF53271 5 167 1.3E-33 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like RPIT_10410 563cec1459007967610a134ba55ff96a 306 SUPERFAMILY SSF53474 19 270 4.19E-32 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_10410 563cec1459007967610a134ba55ff96a 306 Gene3D G3DSA:3.40.50.1820 14 281 6.5E-31 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_10410 563cec1459007967610a134ba55ff96a 306 Pfam PF12697 Alpha/beta hydrolase family 36 272 2.5E-20 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_12000 05a2c52c79c8c355c11d8dd65652a257 349 Pfam PF13377 Periplasmic binding protein-like domain 167 321 7.5E-27 T 13-10-2018 RPIT_12000 05a2c52c79c8c355c11d8dd65652a257 349 Gene3D G3DSA:1.10.260.40 1 55 2.4E-14 T 13-10-2018 RPIT_12000 05a2c52c79c8c355c11d8dd65652a257 349 Gene3D G3DSA:3.40.50.2300 61 314 8.7E-60 T 13-10-2018 RPIT_12000 05a2c52c79c8c355c11d8dd65652a257 349 SMART SM00354 1 70 2.3E-9 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_12000 05a2c52c79c8c355c11d8dd65652a257 349 SUPERFAMILY SSF47413 1 52 6.75E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_12000 05a2c52c79c8c355c11d8dd65652a257 349 SUPERFAMILY SSF53822 60 316 3.85E-54 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_12000 05a2c52c79c8c355c11d8dd65652a257 349 Gene3D G3DSA:3.40.50.2300 159 319 8.7E-60 T 13-10-2018 RPIT_12000 05a2c52c79c8c355c11d8dd65652a257 349 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 43 1.4E-10 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_12610 ee8147b107cef44eccedaed37e676e1d 363 Gene3D G3DSA:3.30.565.10 233 359 1.4E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_12610 ee8147b107cef44eccedaed37e676e1d 363 Pfam PF07730 Histidine kinase 162 227 1.2E-15 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RPIT_12610 ee8147b107cef44eccedaed37e676e1d 363 SUPERFAMILY SSF55874 265 359 1.86E-12 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_09765 24143fc81446682a25150c6cdb99ba1c 131 Gene3D G3DSA:3.40.140.10 1 129 2.7E-46 T 13-10-2018 RPIT_09765 24143fc81446682a25150c6cdb99ba1c 131 SUPERFAMILY SSF53927 1 128 6.52E-39 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 RPIT_09765 24143fc81446682a25150c6cdb99ba1c 131 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 95 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RPIT_09765 24143fc81446682a25150c6cdb99ba1c 131 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 7 126 6.0E-34 T 13-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 RPIT_09765 24143fc81446682a25150c6cdb99ba1c 131 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 10 105 5.3E-11 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain RPIT_04195 63d7ab122732abbf019eafa2d86708c8 288 Gene3D G3DSA:3.40.50.300 9 168 8.6E-6 T 13-10-2018 RPIT_04195 63d7ab122732abbf019eafa2d86708c8 288 Pfam PF03668 P-loop ATPase protein family 8 288 1.9E-96 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 RPIT_04195 63d7ab122732abbf019eafa2d86708c8 288 SUPERFAMILY SSF52540 11 159 4.52E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04195 63d7ab122732abbf019eafa2d86708c8 288 PIRSF PIRSF005052 7 288 2.3E-99 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 RPIT_04195 63d7ab122732abbf019eafa2d86708c8 288 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 7 287 38.305 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 RPIT_02890 47c88b55c0aba47239ee17df56594731 250 PIRSF PIRSF039085 1 250 2.4E-116 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RPIT_02890 47c88b55c0aba47239ee17df56594731 250 SUPERFAMILY SSF52540 1 245 7.05E-79 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_02890 47c88b55c0aba47239ee17df56594731 250 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_02890 47c88b55c0aba47239ee17df56594731 250 Gene3D G3DSA:3.40.50.300 1 249 1.6E-74 T 13-10-2018 RPIT_02890 47c88b55c0aba47239ee17df56594731 250 Pfam PF00005 ABC transporter 17 175 2.1E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_02890 47c88b55c0aba47239ee17df56594731 250 SMART SM00382 26 223 3.5E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_09680 d26b78c559a34cbdf95a62fdf213c54b 171 Gene3D G3DSA:3.90.79.10 1 145 1.1E-36 T 13-10-2018 RPIT_09680 d26b78c559a34cbdf95a62fdf213c54b 171 SUPERFAMILY SSF55811 9 145 3.52E-29 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 RPIT_09680 d26b78c559a34cbdf95a62fdf213c54b 171 Pfam PF00293 NUDIX domain 35 140 6.3E-18 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 RPIT_09680 d26b78c559a34cbdf95a62fdf213c54b 171 ProSitePatterns PS00893 Nudix box signature. 54 75 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RPIT_09975 5beda5dda4b53fb3e5394ce14899aab1 351 TIGRFAM TIGR00433 bioB: biotin synthase 27 319 3.3E-109 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RPIT_09975 5beda5dda4b53fb3e5394ce14899aab1 351 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 231 319 6.4E-12 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RPIT_09975 5beda5dda4b53fb3e5394ce14899aab1 351 SMART SM00729 54 260 2.3E-36 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 RPIT_09975 5beda5dda4b53fb3e5394ce14899aab1 351 SUPERFAMILY SSF102114 14 320 1.57E-70 T 13-10-2018 RPIT_09975 5beda5dda4b53fb3e5394ce14899aab1 351 PIRSF PIRSF001619 2 324 2.2E-104 T 13-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RPIT_09975 5beda5dda4b53fb3e5394ce14899aab1 351 Gene3D G3DSA:3.20.20.70 18 322 6.5E-100 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_09975 5beda5dda4b53fb3e5394ce14899aab1 351 Pfam PF04055 Radical SAM superfamily 63 219 2.8E-13 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIT_09975 5beda5dda4b53fb3e5394ce14899aab1 351 SMART SM00876 231 321 7.9E-27 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RPIT_09975 5beda5dda4b53fb3e5394ce14899aab1 351 Hamap MF_01694 Biotin synthase [bioB]. 14 322 38.158 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RPIT_08335 f89baee44a52ca02e5e07254e7beaa86 320 Gene3D G3DSA:3.20.20.100 1 318 5.8E-92 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily RPIT_08335 f89baee44a52ca02e5e07254e7beaa86 320 PRINTS PR00069 Aldo-keto reductase signature 135 152 1.9E-5 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIT_08335 f89baee44a52ca02e5e07254e7beaa86 320 PRINTS PR00069 Aldo-keto reductase signature 105 123 1.9E-5 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIT_08335 f89baee44a52ca02e5e07254e7beaa86 320 SUPERFAMILY SSF51430 1 313 7.46E-84 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily RPIT_08335 f89baee44a52ca02e5e07254e7beaa86 320 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 135 152 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RPIT_08335 f89baee44a52ca02e5e07254e7beaa86 320 Pfam PF00248 Aldo/keto reductase family 15 311 3.8E-57 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain RPIT_10860 c93df055c63b8ea30242e40b3b25aa00 303 Pfam PF04471 Restriction endonuclease 163 279 6.1E-34 T 13-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 RPIT_10860 c93df055c63b8ea30242e40b3b25aa00 303 SUPERFAMILY SSF52980 165 282 5.9E-12 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RPIT_10860 c93df055c63b8ea30242e40b3b25aa00 303 Pfam PF14338 Mrr N-terminal domain 6 90 6.8E-27 T 13-10-2018 IPR025745 Restriction system protein Mrr-like N-terminal domain RPIT_10860 c93df055c63b8ea30242e40b3b25aa00 303 Gene3D G3DSA:3.40.91.100 138 298 4.6E-12 T 13-10-2018 RPIT_06390 f7105c544d252539b65de3dfb918e791 1179 Pfam PF14579 Helix-hairpin-helix motif 826 915 1.6E-24 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_06390 f7105c544d252539b65de3dfb918e791 1179 SUPERFAMILY SSF89550 5 281 2.35E-33 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 RPIT_06390 f7105c544d252539b65de3dfb918e791 1179 Pfam PF01336 OB-fold nucleic acid binding domain 1016 1081 1.8E-6 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RPIT_06390 f7105c544d252539b65de3dfb918e791 1179 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 311 753 2.8E-159 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_06390 f7105c544d252539b65de3dfb918e791 1179 Gene3D G3DSA:2.40.50.140 997 1084 1.4E-5 T 13-10-2018 RPIT_06390 f7105c544d252539b65de3dfb918e791 1179 Gene3D G3DSA:1.10.10.1600 444 530 2.6E-20 T 13-10-2018 RPIT_06390 f7105c544d252539b65de3dfb918e791 1179 SMART SM00481 6 73 1.2E-31 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal RPIT_06390 f7105c544d252539b65de3dfb918e791 1179 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1052 0.0 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIT_06390 f7105c544d252539b65de3dfb918e791 1179 Gene3D G3DSA:3.20.20.140 1 287 6.1E-100 T 13-10-2018 RPIT_06390 f7105c544d252539b65de3dfb918e791 1179 Pfam PF02811 PHP domain 7 191 2.8E-48 T 13-10-2018 IPR004013 PHP domain GO:0003824 RPIT_10545 8655b6fd6dfc1a2950f9b8a55c9f6e6c 445 Gene3D G3DSA:3.40.50.300 232 440 1.8E-53 T 13-10-2018 RPIT_10545 8655b6fd6dfc1a2950f9b8a55c9f6e6c 445 Gene3D G3DSA:3.40.50.1010 17 163 5.4E-19 T 13-10-2018 RPIT_10545 8655b6fd6dfc1a2950f9b8a55c9f6e6c 445 SUPERFAMILY SSF52540 233 395 1.05E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10545 8655b6fd6dfc1a2950f9b8a55c9f6e6c 445 Pfam PF02562 PhoH-like protein 234 438 7.7E-55 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 RPIT_10545 8655b6fd6dfc1a2950f9b8a55c9f6e6c 445 Pfam PF13638 PIN domain 22 160 1.5E-27 T 13-10-2018 IPR002716 PIN domain RPIT_10545 8655b6fd6dfc1a2950f9b8a55c9f6e6c 445 SMART SM00670 20 147 4.3E-17 T 13-10-2018 IPR002716 PIN domain RPIT_10545 8655b6fd6dfc1a2950f9b8a55c9f6e6c 445 SUPERFAMILY SSF88723 21 161 2.03E-10 T 13-10-2018 IPR029060 PIN-like domain superfamily RPIT_02040 aa077f36b54e9f8d52e04d6526955b8a 357 SUPERFAMILY SSF48208 48 269 1.96E-11 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 RPIT_02040 aa077f36b54e9f8d52e04d6526955b8a 357 Pfam PF03663 Glycosyl hydrolase family 76 99 306 8.0E-11 T 13-10-2018 IPR005198 Glycoside hydrolase, family 76 RPIT_02040 aa077f36b54e9f8d52e04d6526955b8a 357 Gene3D G3DSA:1.50.10.20 10 344 1.4E-62 T 13-10-2018 RPIT_01515 00b6f7d1a7d1c6030d62e94f7289597a 442 Pfam PF00909 Ammonium Transporter Family 12 416 6.8E-125 T 13-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RPIT_01515 00b6f7d1a7d1c6030d62e94f7289597a 442 Gene3D G3DSA:1.10.3430.10 2 431 1.9E-138 T 13-10-2018 IPR029020 Ammonium/urea transporter RPIT_01515 00b6f7d1a7d1c6030d62e94f7289597a 442 ProSitePatterns PS01219 Ammonium transporters signature. 172 197 - T 13-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 RPIT_01515 00b6f7d1a7d1c6030d62e94f7289597a 442 SUPERFAMILY SSF111352 6 397 7.59E-121 T 13-10-2018 RPIT_01515 00b6f7d1a7d1c6030d62e94f7289597a 442 TIGRFAM TIGR00836 amt: ammonium transporter 10 416 9.9E-138 T 13-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RPIT_11190 94afb00104af2f5e9885bd66ba32c54a 175 SUPERFAMILY SSF55729 10 172 3.72E-18 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_11190 94afb00104af2f5e9885bd66ba32c54a 175 Pfam PF00583 Acetyltransferase (GNAT) family 46 149 3.3E-9 T 13-10-2018 IPR000182 GNAT domain RPIT_11190 94afb00104af2f5e9885bd66ba32c54a 175 Gene3D G3DSA:3.40.630.30 6 168 3.1E-18 T 13-10-2018 RPIT_04020 927578792f83bc7d0664c35d7199f0c9 487 Gene3D G3DSA:3.40.50.720 18 111 4.1E-19 T 13-10-2018 RPIT_04020 927578792f83bc7d0664c35d7199f0c9 487 SUPERFAMILY SSF51984 19 113 2.88E-16 T 13-10-2018 RPIT_04020 927578792f83bc7d0664c35d7199f0c9 487 Pfam PF08245 Mur ligase middle domain 133 321 9.1E-24 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 RPIT_04020 927578792f83bc7d0664c35d7199f0c9 487 Gene3D G3DSA:3.90.190.20 346 487 2.4E-39 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RPIT_04020 927578792f83bc7d0664c35d7199f0c9 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 343 408 2.1E-6 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 RPIT_04020 927578792f83bc7d0664c35d7199f0c9 487 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 24 483 5.6E-112 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RPIT_04020 927578792f83bc7d0664c35d7199f0c9 487 Gene3D G3DSA:3.40.1190.10 113 339 2.5E-47 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 RPIT_04020 927578792f83bc7d0664c35d7199f0c9 487 SUPERFAMILY SSF53244 342 483 3.75E-37 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RPIT_04020 927578792f83bc7d0664c35d7199f0c9 487 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 20 90 5.9E-6 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RPIT_04020 927578792f83bc7d0664c35d7199f0c9 487 SUPERFAMILY SSF53623 124 336 1.07E-44 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 RPIT_04020 927578792f83bc7d0664c35d7199f0c9 487 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 23 485 31.099 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RPIT_04020 927578792f83bc7d0664c35d7199f0c9 487 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 131 154 - T 13-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 RPIT_02315 0fc8eb4d35d801958eb86ac61be57537 157 Pfam PF13565 Homeodomain-like domain 61 130 1.4E-11 T 13-10-2018 RPIT_02315 0fc8eb4d35d801958eb86ac61be57537 157 SUPERFAMILY SSF46689 33 135 3.94E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_11090 87d41857f7a4f2d85a98df42c39719e1 336 Pfam PF01180 Dihydroorotate dehydrogenase 4 292 1.5E-12 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 RPIT_11090 87d41857f7a4f2d85a98df42c39719e1 336 PIRSF PIRSF000164 1 307 1.4E-33 T 13-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 RPIT_11090 87d41857f7a4f2d85a98df42c39719e1 336 Gene3D G3DSA:3.20.20.70 4 298 7.1E-53 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_11090 87d41857f7a4f2d85a98df42c39719e1 336 SUPERFAMILY SSF51395 1 294 4.33E-53 T 13-10-2018 RPIT_06530 1bbaa7eac313881b4f9f37c8303b6a98 358 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 353 3.0E-93 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 RPIT_06530 1bbaa7eac313881b4f9f37c8303b6a98 358 Gene3D G3DSA:3.40.50.620 1 210 3.8E-74 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_06530 1bbaa7eac313881b4f9f37c8303b6a98 358 Pfam PF03054 tRNA methyl transferase 1 353 3.2E-115 T 13-10-2018 RPIT_06530 1bbaa7eac313881b4f9f37c8303b6a98 358 SUPERFAMILY SSF52402 1 243 5.73E-47 T 13-10-2018 RPIT_06530 1bbaa7eac313881b4f9f37c8303b6a98 358 Gene3D G3DSA:2.40.30.10 280 358 4.8E-13 T 13-10-2018 RPIT_06530 1bbaa7eac313881b4f9f37c8303b6a98 358 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 354 36.361 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 RPIT_06530 1bbaa7eac313881b4f9f37c8303b6a98 358 Gene3D G3DSA:2.30.30.280 212 277 9.2E-17 T 13-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 RPIT_13770 626964ba54cce919892076beca5f9cbf 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 166 198 2.1E-4 T 13-10-2018 IPR001451 Hexapeptide repeat RPIT_13770 626964ba54cce919892076beca5f9cbf 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 172 200 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RPIT_13770 626964ba54cce919892076beca5f9cbf 214 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 5 211 6.6E-57 T 13-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like RPIT_13770 626964ba54cce919892076beca5f9cbf 214 Gene3D G3DSA:2.160.10.10 99 207 1.4E-28 T 13-10-2018 RPIT_13770 626964ba54cce919892076beca5f9cbf 214 SUPERFAMILY SSF51161 5 211 2.22E-37 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily RPIT_13770 626964ba54cce919892076beca5f9cbf 214 Gene3D G3DSA:3.40.50.20 1 94 7.2E-17 T 13-10-2018 RPIT_03320 5f0dfe59a94488431b8c40c614d9dde9 396 SUPERFAMILY SSF51735 4 163 9.69E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_03320 5f0dfe59a94488431b8c40c614d9dde9 396 Gene3D G3DSA:3.40.50.720 4 134 5.9E-37 T 13-10-2018 RPIT_03320 5f0dfe59a94488431b8c40c614d9dde9 396 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 133 1.8E-20 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 RPIT_03320 5f0dfe59a94488431b8c40c614d9dde9 396 SUPERFAMILY SSF55347 139 331 2.45E-34 T 13-10-2018 RPIT_03320 5f0dfe59a94488431b8c40c614d9dde9 396 Gene3D G3DSA:3.30.360.10 135 385 2.2E-61 T 13-10-2018 RPIT_03320 5f0dfe59a94488431b8c40c614d9dde9 396 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 145 216 1.2E-11 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 RPIT_04765 c0b48a60cde1a8114d8f7ca0883d6e8f 162 Gene3D G3DSA:1.10.10.10 76 157 2.5E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_04765 c0b48a60cde1a8114d8f7ca0883d6e8f 162 SUPERFAMILY SSF46785 83 157 3.54E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_04765 c0b48a60cde1a8114d8f7ca0883d6e8f 162 Pfam PF11625 Protein of unknown function (DUF3253) 84 156 6.9E-23 T 13-10-2018 IPR021660 Protein of unknown function DUF3253 RPIT_03145 fd0b60fee1c22ca88dca4a058a44ddf5 123 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 4 117 19.134 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03145 fd0b60fee1c22ca88dca4a058a44ddf5 123 Gene3D G3DSA:2.30.30.30 1 121 1.1E-24 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 RPIT_03145 fd0b60fee1c22ca88dca4a058a44ddf5 123 SUPERFAMILY SSF50104 2 94 6.52E-22 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily RPIT_03145 fd0b60fee1c22ca88dca4a058a44ddf5 123 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 41 122 1.0E-16 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03145 fd0b60fee1c22ca88dca4a058a44ddf5 123 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 4 121 1.5E-24 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_03145 fd0b60fee1c22ca88dca4a058a44ddf5 123 ProSitePatterns PS01108 Ribosomal protein L24 signature. 9 26 - T 13-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03145 fd0b60fee1c22ca88dca4a058a44ddf5 123 Pfam PF00467 KOW motif 8 38 2.8E-6 T 13-10-2018 IPR005824 KOW RPIT_03145 fd0b60fee1c22ca88dca4a058a44ddf5 123 SMART SM00739 5 32 7.7E-5 T 13-10-2018 IPR005824 KOW RPIT_08470 0f703e7b625d856bda0f4a4637248c16 128 SUPERFAMILY SSF55961 4 124 8.68E-17 T 13-10-2018 RPIT_08470 0f703e7b625d856bda0f4a4637248c16 128 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 2 108 5.3E-7 T 13-10-2018 IPR019587 Polyketide cyclase/dehydrase RPIT_08470 0f703e7b625d856bda0f4a4637248c16 128 Gene3D G3DSA:3.30.530.20 3 120 6.6E-13 T 13-10-2018 IPR023393 START-like domain superfamily RPIT_09840 6d2f8447d0e68096ec5baa497dc08d26 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 120 2.6E-35 T 13-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 RPIT_09840 6d2f8447d0e68096ec5baa497dc08d26 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 280 1.3E-61 T 13-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 RPIT_09840 6d2f8447d0e68096ec5baa497dc08d26 284 Gene3D G3DSA:3.40.50.720 6 258 1.2E-108 T 13-10-2018 RPIT_09840 6d2f8447d0e68096ec5baa497dc08d26 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.0E-63 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 RPIT_09840 6d2f8447d0e68096ec5baa497dc08d26 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 205 234 1.0E-63 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 RPIT_09840 6d2f8447d0e68096ec5baa497dc08d26 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.0E-63 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 RPIT_09840 6d2f8447d0e68096ec5baa497dc08d26 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 1.0E-63 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 RPIT_09840 6d2f8447d0e68096ec5baa497dc08d26 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.0E-63 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 RPIT_09840 6d2f8447d0e68096ec5baa497dc08d26 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 1.0E-63 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 RPIT_09840 6d2f8447d0e68096ec5baa497dc08d26 284 SUPERFAMILY SSF51735 122 278 2.33E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_09840 6d2f8447d0e68096ec5baa497dc08d26 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 36.027 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 RPIT_09840 6d2f8447d0e68096ec5baa497dc08d26 284 SUPERFAMILY SSF53223 2 121 2.69E-36 T 13-10-2018 RPIT_09840 6d2f8447d0e68096ec5baa497dc08d26 284 Gene3D G3DSA:3.40.50.10860 8 275 1.2E-108 T 13-10-2018 RPIT_05470 e127d06a792364ca6f99dcee23c23916 491 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 327 338 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIT_05470 e127d06a792364ca6f99dcee23c23916 491 Gene3D G3DSA:3.40.50.10420 164 308 3.2E-8 T 13-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily RPIT_05470 e127d06a792364ca6f99dcee23c23916 491 SUPERFAMILY SSF46548 296 408 1.67E-15 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIT_05470 e127d06a792364ca6f99dcee23c23916 491 SUPERFAMILY SSF100950 75 309 5.44E-34 T 13-10-2018 IPR037171 NagB/RpiA transferase-like RPIT_05470 e127d06a792364ca6f99dcee23c23916 491 Pfam PF13183 4Fe-4S dicluster domain 325 393 4.6E-10 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIT_05470 e127d06a792364ca6f99dcee23c23916 491 Pfam PF02589 LUD domain 82 308 6.2E-48 T 13-10-2018 IPR003741 LUD domain RPIT_05470 e127d06a792364ca6f99dcee23c23916 491 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 30 470 4.1E-134 T 13-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 RPIT_05470 e127d06a792364ca6f99dcee23c23916 491 Pfam PF11870 Domain of unknown function (DUF3390) 404 486 5.3E-8 T 13-10-2018 IPR024569 4Fe-4S binding protein, C-terminal RPIT_10505 3d4001d2dde62b2c70976a18c9826b40 421 Gene3D G3DSA:3.40.1020.10 324 421 3.1E-10 T 13-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 RPIT_10505 3d4001d2dde62b2c70976a18c9826b40 421 SUPERFAMILY SSF53686 6 365 1.01E-91 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIT_10505 3d4001d2dde62b2c70976a18c9826b40 421 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 328 420 1.1E-25 T 13-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 RPIT_10505 3d4001d2dde62b2c70976a18c9826b40 421 Gene3D G3DSA:3.40.50.1100 20 323 3.3E-101 T 13-10-2018 RPIT_10505 3d4001d2dde62b2c70976a18c9826b40 421 Gene3D G3DSA:3.40.50.1100 54 152 3.3E-101 T 13-10-2018 RPIT_10505 3d4001d2dde62b2c70976a18c9826b40 421 TIGRFAM TIGR02079 THD1: threonine dehydratase 11 421 8.7E-151 T 13-10-2018 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 RPIT_10505 3d4001d2dde62b2c70976a18c9826b40 421 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 46 59 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RPIT_10505 3d4001d2dde62b2c70976a18c9826b40 421 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 315 2.9E-78 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme RPIT_01020 33ff2b1c0421ed36de3721b1c83f1ff6 227 SMART SM00895 88 208 1.5E-20 T 13-10-2018 IPR011711 GntR, C-terminal RPIT_01020 33ff2b1c0421ed36de3721b1c83f1ff6 227 SMART SM00345 20 78 4.3E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_01020 33ff2b1c0421ed36de3721b1c83f1ff6 227 SUPERFAMILY SSF48008 86 214 1.91E-28 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIT_01020 33ff2b1c0421ed36de3721b1c83f1ff6 227 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 78 2.6E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_01020 33ff2b1c0421ed36de3721b1c83f1ff6 227 Pfam PF07729 FCD domain 88 207 4.8E-28 T 13-10-2018 IPR011711 GntR, C-terminal RPIT_01020 33ff2b1c0421ed36de3721b1c83f1ff6 227 Gene3D G3DSA:1.20.120.530 84 218 2.7E-30 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIT_01020 33ff2b1c0421ed36de3721b1c83f1ff6 227 SUPERFAMILY SSF46785 15 82 6.12E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_01020 33ff2b1c0421ed36de3721b1c83f1ff6 227 Gene3D G3DSA:1.10.10.10 13 80 1.2E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_01020 33ff2b1c0421ed36de3721b1c83f1ff6 227 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 1.9E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_01020 33ff2b1c0421ed36de3721b1c83f1ff6 227 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 1.9E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_05675 b6cb6071e9ad4ca0eac35677245f708a 360 SUPERFAMILY SSF56752 8 356 4.32E-103 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 RPIT_05675 b6cb6071e9ad4ca0eac35677245f708a 360 Pfam PF01063 Amino-transferase class IV 72 315 1.3E-30 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 RPIT_05675 b6cb6071e9ad4ca0eac35677245f708a 360 PIRSF PIRSF006468 3 360 1.3E-118 T 13-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 RPIT_05675 b6cb6071e9ad4ca0eac35677245f708a 360 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 46 358 1.8E-113 T 13-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 RPIT_05675 b6cb6071e9ad4ca0eac35677245f708a 360 Gene3D G3DSA:3.20.10.10 173 342 1.2E-121 T 13-10-2018 RPIT_05675 b6cb6071e9ad4ca0eac35677245f708a 360 Gene3D G3DSA:3.30.470.10 27 355 1.2E-121 T 13-10-2018 RPIT_10300 78ef7b5905b5347e033ef6d693bf3e79 182 Gene3D G3DSA:3.60.15.10 3 180 2.6E-18 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RPIT_10300 78ef7b5905b5347e033ef6d693bf3e79 182 SMART SM00849 21 168 5.6E-9 T 13-10-2018 IPR001279 Metallo-beta-lactamase RPIT_10300 78ef7b5905b5347e033ef6d693bf3e79 182 SUPERFAMILY SSF56281 18 173 1.96E-21 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RPIT_10300 78ef7b5905b5347e033ef6d693bf3e79 182 Pfam PF00753 Metallo-beta-lactamase superfamily 22 147 1.4E-6 T 13-10-2018 IPR001279 Metallo-beta-lactamase RPIT_00985 af245d87a686958ad7fd6a1e8854b298 217 SUPERFAMILY SSF52540 17 184 1.12E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_00985 af245d87a686958ad7fd6a1e8854b298 217 Pfam PF13189 Cytidylate kinase-like family 4 165 3.3E-34 T 13-10-2018 RPIT_00985 af245d87a686958ad7fd6a1e8854b298 217 Gene3D G3DSA:3.40.50.300 1 182 1.3E-40 T 13-10-2018 RPIT_05665 eb7cf4a5c7bc3c6127525ac7e7085ce6 239 Pfam PF03458 UPF0126 domain 98 170 1.5E-19 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 RPIT_05665 eb7cf4a5c7bc3c6127525ac7e7085ce6 239 Pfam PF03458 UPF0126 domain 12 84 4.0E-19 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 RPIT_04700 3f05d50d809f7d8172f0691af5a3ab90 131 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 13 108 3.3E-29 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RPIT_04700 3f05d50d809f7d8172f0691af5a3ab90 131 Pfam PF02410 Ribosomal silencing factor during starvation 16 108 5.7E-21 T 13-10-2018 RPIT_04700 3f05d50d809f7d8172f0691af5a3ab90 131 SUPERFAMILY SSF81301 9 118 1.8E-34 T 13-10-2018 RPIT_04700 3f05d50d809f7d8172f0691af5a3ab90 131 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 4 109 20.755 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RPIT_04700 3f05d50d809f7d8172f0691af5a3ab90 131 Gene3D G3DSA:3.30.460.10 1 112 5.5E-35 T 13-10-2018 RPIT_13245 2ee0bad621c39dc806bf70234710155a 341 Gene3D G3DSA:3.20.20.30 2 340 1.7E-74 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 RPIT_13245 2ee0bad621c39dc806bf70234710155a 341 SUPERFAMILY SSF51679 4 338 4.06E-67 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 RPIT_13245 2ee0bad621c39dc806bf70234710155a 341 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 4 337 7.3E-143 T 13-10-2018 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative RPIT_13245 2ee0bad621c39dc806bf70234710155a 341 Pfam PF00296 Luciferase-like monooxygenase 26 305 3.2E-40 T 13-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIT_06360 a8b9cc27c58ba10626a5d753bbe217ad 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 5 238 30.353 T 13-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 RPIT_06360 a8b9cc27c58ba10626a5d753bbe217ad 245 SUPERFAMILY SSF51366 4 237 1.71E-62 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 RPIT_06360 a8b9cc27c58ba10626a5d753bbe217ad 245 Gene3D G3DSA:3.20.20.70 1 241 5.8E-88 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_06360 a8b9cc27c58ba10626a5d753bbe217ad 245 Pfam PF00977 Histidine biosynthesis protein 6 231 1.2E-59 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 RPIT_06360 a8b9cc27c58ba10626a5d753bbe217ad 245 TIGRFAM TIGR01919 hisA-trpF: bifunctional HisA/TrpF protein 4 239 5.6E-104 T 13-10-2018 IPR010188 Bifunctional HisA/TrpF GO:0000105|GO:0000162|GO:0003949|GO:0004640|GO:0005737 KEGG: 00340+5.3.1.16 RPIT_14400 1ad73b7ccfa15a89420c9e71efa16336 267 SMART SM00563 54 172 2.5E-14 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 RPIT_14400 1ad73b7ccfa15a89420c9e71efa16336 267 Pfam PF01553 Acyltransferase 39 169 3.5E-16 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 RPIT_14400 1ad73b7ccfa15a89420c9e71efa16336 267 SUPERFAMILY SSF69593 44 224 2.35E-29 T 13-10-2018 RPIT_02535 759a2fb7678824be3e7b18cdd13d0d02 490 Pfam PF01734 Patatin-like phospholipase 24 306 2.3E-27 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 RPIT_02535 759a2fb7678824be3e7b18cdd13d0d02 490 SUPERFAMILY SSF52151 20 347 2.44E-30 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RPIT_02535 759a2fb7678824be3e7b18cdd13d0d02 490 Gene3D G3DSA:3.40.1090.10 8 105 2.6E-11 T 13-10-2018 RPIT_02535 759a2fb7678824be3e7b18cdd13d0d02 490 Gene3D G3DSA:3.40.1090.10 160 353 1.4E-11 T 13-10-2018 RPIT_12835 dbc8ee037ae9ca7b8aad8d4f281893e6 511 Gene3D G3DSA:3.40.50.300 267 504 3.0E-43 T 13-10-2018 RPIT_12835 dbc8ee037ae9ca7b8aad8d4f281893e6 511 Gene3D G3DSA:3.40.50.300 6 266 1.0E-58 T 13-10-2018 RPIT_12835 dbc8ee037ae9ca7b8aad8d4f281893e6 511 SUPERFAMILY SSF52540 7 234 3.77E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_12835 dbc8ee037ae9ca7b8aad8d4f281893e6 511 SUPERFAMILY SSF52540 279 493 2.58E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_12835 dbc8ee037ae9ca7b8aad8d4f281893e6 511 SMART SM00382 33 223 2.1E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_12835 dbc8ee037ae9ca7b8aad8d4f281893e6 511 SMART SM00382 289 482 0.19 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_12835 dbc8ee037ae9ca7b8aad8d4f281893e6 511 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_12835 dbc8ee037ae9ca7b8aad8d4f281893e6 511 Pfam PF00005 ABC transporter 24 175 2.0E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_12835 dbc8ee037ae9ca7b8aad8d4f281893e6 511 Pfam PF00005 ABC transporter 280 434 2.0E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_02030 2ada2a02eb75219f2c0a38c586106633 194 Gene3D G3DSA:1.10.10.10 12 87 2.6E-5 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_02030 2ada2a02eb75219f2c0a38c586106633 194 SUPERFAMILY SSF46785 25 77 1.68E-6 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_02030 2ada2a02eb75219f2c0a38c586106633 194 Pfam PF13463 Winged helix DNA-binding domain 20 71 1.3E-4 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_13735 2cb91483167c1397bb47f0f59bc83c61 186 SUPERFAMILY SSF117916 98 168 1.18E-12 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily RPIT_13735 2cb91483167c1397bb47f0f59bc83c61 186 Gene3D G3DSA:3.30.300.130 89 175 2.1E-13 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily RPIT_13735 2cb91483167c1397bb47f0f59bc83c61 186 Pfam PF01106 NifU-like domain 101 164 5.1E-12 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 RPIT_13735 2cb91483167c1397bb47f0f59bc83c61 186 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 110 165 0.002 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 RPIT_02015 70459207ddc1fb4a646d6c525cd35771 751 SUPERFAMILY SSF55326 406 578 1.02E-53 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily RPIT_02015 70459207ddc1fb4a646d6c525cd35771 751 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 751 293.887 T 13-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RPIT_02015 70459207ddc1fb4a646d6c525cd35771 751 Pfam PF02769 AIR synthase related protein, C-terminal domain 587 726 1.1E-14 T 13-10-2018 IPR010918 PurM-like, C-terminal domain RPIT_02015 70459207ddc1fb4a646d6c525cd35771 751 Pfam PF02769 AIR synthase related protein, C-terminal domain 212 367 8.2E-32 T 13-10-2018 IPR010918 PurM-like, C-terminal domain RPIT_02015 70459207ddc1fb4a646d6c525cd35771 751 SUPERFAMILY SSF55326 18 204 4.64E-47 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily RPIT_02015 70459207ddc1fb4a646d6c525cd35771 751 Gene3D G3DSA:3.30.1330.10 49 203 3.3E-124 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily RPIT_02015 70459207ddc1fb4a646d6c525cd35771 751 Gene3D G3DSA:3.90.650.10 35 376 3.3E-124 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily RPIT_02015 70459207ddc1fb4a646d6c525cd35771 751 PIRSF PIRSF001587 9 751 1.5E-284 T 13-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RPIT_02015 70459207ddc1fb4a646d6c525cd35771 751 SUPERFAMILY SSF56042 584 750 3.29E-33 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily RPIT_02015 70459207ddc1fb4a646d6c525cd35771 751 Pfam PF00586 AIR synthase related protein, N-terminal domain 469 573 3.0E-20 T 13-10-2018 IPR016188 PurM-like, N-terminal domain RPIT_02015 70459207ddc1fb4a646d6c525cd35771 751 Pfam PF00586 AIR synthase related protein, N-terminal domain 97 198 7.9E-23 T 13-10-2018 IPR016188 PurM-like, N-terminal domain RPIT_02015 70459207ddc1fb4a646d6c525cd35771 751 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 24 746 1.5E-253 T 13-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RPIT_02015 70459207ddc1fb4a646d6c525cd35771 751 Gene3D G3DSA:3.30.1330.10 398 576 1.0E-52 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily RPIT_02015 70459207ddc1fb4a646d6c525cd35771 751 SUPERFAMILY SSF56042 211 440 1.94E-50 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily RPIT_02015 70459207ddc1fb4a646d6c525cd35771 751 Gene3D G3DSA:3.90.650.10 581 751 3.1E-36 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily RPIT_12820 2ca24e68561d6250bbbae8a253335d6c 282 SUPERFAMILY SSF74650 33 278 1.57E-8 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 RPIT_12820 2ca24e68561d6250bbbae8a253335d6c 282 Gene3D G3DSA:2.70.98.10 17 280 2.5E-14 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 RPIT_02640 a345da5948e0117674b7a0143faaae39 231 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 72 218 29.345 T 13-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02640 a345da5948e0117674b7a0143faaae39 231 Gene3D G3DSA:3.30.460.80 56 191 7.8E-48 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02640 a345da5948e0117674b7a0143faaae39 231 SUPERFAMILY SSF143243 82 226 2.35E-50 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02640 a345da5948e0117674b7a0143faaae39 231 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 89 210 1.8E-46 T 13-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02640 a345da5948e0117674b7a0143faaae39 231 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 140 200 5.0E-20 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02640 a345da5948e0117674b7a0143faaae39 231 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 89 211 5.6E-46 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_01465 f5fd3528d8cb7714e80e7f6752995374 205 SUPERFAMILY SSF52540 3 184 2.28E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01465 f5fd3528d8cb7714e80e7f6752995374 205 Hamap MF_00165 Thymidylate kinase [tmk]. 4 202 27.124 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 RPIT_01465 f5fd3528d8cb7714e80e7f6752995374 205 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 3 194 4.2E-43 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 RPIT_01465 f5fd3528d8cb7714e80e7f6752995374 205 Pfam PF02223 Thymidylate kinase 8 193 1.2E-41 T 13-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 RPIT_01465 f5fd3528d8cb7714e80e7f6752995374 205 Gene3D G3DSA:3.40.50.300 1 203 1.3E-60 T 13-10-2018 RPIT_06795 6088f5f8602c4cb7e22cda39f1bda135 84 Pfam PF13490 Putative zinc-finger 12 45 1.8E-5 T 13-10-2018 IPR027383 Putative zinc-finger RPIT_03690 d7e47334b78dca244c7ef6b3e7e92975 293 Pfam PF00005 ABC transporter 17 157 5.5E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_03690 d7e47334b78dca244c7ef6b3e7e92975 293 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_03690 d7e47334b78dca244c7ef6b3e7e92975 293 SMART SM00382 26 205 6.6E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_03690 d7e47334b78dca244c7ef6b3e7e92975 293 Gene3D G3DSA:3.40.50.300 1 228 1.9E-60 T 13-10-2018 RPIT_03690 d7e47334b78dca244c7ef6b3e7e92975 293 SUPERFAMILY SSF52540 2 220 4.67E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_07865 f23f614fc36e88d4ea70396161b1d8ef 667 Gene3D G3DSA:3.40.50.410 34 224 1.7E-29 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily RPIT_07865 f23f614fc36e88d4ea70396161b1d8ef 667 Pfam PF13519 von Willebrand factor type A domain 37 155 2.9E-9 T 13-10-2018 IPR002035 von Willebrand factor, type A RPIT_07865 f23f614fc36e88d4ea70396161b1d8ef 667 SMART SM00327 34 222 7.0E-12 T 13-10-2018 IPR002035 von Willebrand factor, type A RPIT_07865 f23f614fc36e88d4ea70396161b1d8ef 667 SUPERFAMILY SSF53300 36 220 2.09E-21 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily RPIT_13295 92935b987609783f2c407cddcd29f07b 272 Gene3D G3DSA:3.20.20.70 2 263 6.1E-44 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_13295 92935b987609783f2c407cddcd29f07b 272 Pfam PF00290 Tryptophan synthase alpha chain 9 247 1.8E-29 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RPIT_13295 92935b987609783f2c407cddcd29f07b 272 SUPERFAMILY SSF51366 3 248 1.22E-38 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 RPIT_14310 366585a7e4685e0eedf4c41f21c5ce1d 206 Pfam PF01545 Cation efflux family 14 181 1.0E-10 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIT_14310 366585a7e4685e0eedf4c41f21c5ce1d 206 Gene3D G3DSA:1.20.1510.10 9 191 8.4E-7 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily RPIT_14310 366585a7e4685e0eedf4c41f21c5ce1d 206 SUPERFAMILY SSF161111 8 185 1.83E-26 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily RPIT_11850 921b6eee4d79dd67583795387c564895 229 Pfam PF03070 TENA/THI-4/PQQC family 27 219 1.9E-27 T 13-10-2018 IPR004305 Thiaminase-2/PQQC RPIT_11850 921b6eee4d79dd67583795387c564895 229 SUPERFAMILY SSF48613 2 219 6.23E-49 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 RPIT_11850 921b6eee4d79dd67583795387c564895 229 Gene3D G3DSA:1.20.910.10 3 227 8.8E-55 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 RPIT_01360 5e786c548b607a2b36f33fb50ac522b6 810 Gene3D G3DSA:3.30.10.20 707 765 1.1E-8 T 13-10-2018 RPIT_01360 5e786c548b607a2b36f33fb50ac522b6 810 Gene3D G3DSA:1.10.3810.10 66 274 2.4E-70 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RPIT_01360 5e786c548b607a2b36f33fb50ac522b6 810 Gene3D G3DSA:3.40.710.10 310 706 7.4E-84 T 13-10-2018 RPIT_01360 5e786c548b607a2b36f33fb50ac522b6 810 SUPERFAMILY SSF53955 62 278 2.02E-66 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily RPIT_01360 5e786c548b607a2b36f33fb50ac522b6 810 SUPERFAMILY SSF56601 240 703 9.2E-79 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like RPIT_01360 5e786c548b607a2b36f33fb50ac522b6 810 Pfam PF00912 Transglycosylase 72 258 1.4E-57 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RPIT_01360 5e786c548b607a2b36f33fb50ac522b6 810 Pfam PF00905 Penicillin binding protein transpeptidase domain 359 635 3.1E-34 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RPIT_09820 e011e336d278ac53e419187725616c32 329 Gene3D G3DSA:3.90.110.10 156 329 1.4E-68 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RPIT_09820 e011e336d278ac53e419187725616c32 329 PIRSF PIRSF000102 3 327 2.5E-62 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RPIT_09820 e011e336d278ac53e419187725616c32 329 SUPERFAMILY SSF51735 4 155 2.59E-39 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_09820 e011e336d278ac53e419187725616c32 329 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 5 322 2.5E-148 T 13-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RPIT_09820 e011e336d278ac53e419187725616c32 329 Gene3D G3DSA:3.40.50.720 2 155 4.4E-51 T 13-10-2018 RPIT_09820 e011e336d278ac53e419187725616c32 329 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 156 168 - T 13-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 RPIT_09820 e011e336d278ac53e419187725616c32 329 SUPERFAMILY SSF56327 157 325 9.73E-63 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RPIT_09820 e011e336d278ac53e419187725616c32 329 Hamap MF_01517 Malate dehydrogenase [mdh]. 3 327 55.17 T 13-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RPIT_09820 e011e336d278ac53e419187725616c32 329 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 150 2.9E-32 T 13-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 RPIT_09820 e011e336d278ac53e419187725616c32 329 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 157 324 1.7E-36 T 13-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 RPIT_14350 4e0f0a22cecadacd5b182ac5c580c96d 378 Gene3D G3DSA:3.90.1200.10 191 345 4.5E-7 T 13-10-2018 RPIT_14350 4e0f0a22cecadacd5b182ac5c580c96d 378 Pfam PF01636 Phosphotransferase enzyme family 117 299 1.0E-11 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase RPIT_14350 4e0f0a22cecadacd5b182ac5c580c96d 378 SUPERFAMILY SSF56112 83 326 3.64E-20 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily RPIT_00130 ab67488ce153f54aeea74c1e0ec64474 111 Pfam PF13601 Winged helix DNA-binding domain 17 99 2.0E-13 T 13-10-2018 IPR027395 Winged helix DNA-binding domain RPIT_00130 ab67488ce153f54aeea74c1e0ec64474 111 SUPERFAMILY SSF46785 15 99 1.79E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_00130 ab67488ce153f54aeea74c1e0ec64474 111 Gene3D G3DSA:1.10.10.10 3 101 4.9E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_02605 9fc3db6893766ef0994d2399baaa8944 106 Gene3D G3DSA:3.30.70.120 1 103 4.2E-38 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RPIT_02605 9fc3db6893766ef0994d2399baaa8944 106 SUPERFAMILY SSF102705 4 100 9.42E-23 T 13-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily RPIT_00745 85e925b1a5b2a88becf69d643a1e7004 196 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 190 2.7E-29 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RPIT_00745 85e925b1a5b2a88becf69d643a1e7004 196 Pfam PF01914 MarC family integral membrane protein 3 193 3.2E-49 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RPIT_09360 6767bc4dd28f97f8f50da6fca862bb40 111 SUPERFAMILY SSF46785 20 79 1.22E-6 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_09360 6767bc4dd28f97f8f50da6fca862bb40 111 Gene3D G3DSA:1.10.10.10 2 104 2.1E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_09360 6767bc4dd28f97f8f50da6fca862bb40 111 Pfam PF09339 IclR helix-turn-helix domain 21 66 5.7E-5 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIT_09545 31ba497e017e4818b5e9087de72942ba 448 Pfam PF07690 Major Facilitator Superfamily 12 303 1.6E-21 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIT_09545 31ba497e017e4818b5e9087de72942ba 448 SUPERFAMILY SSF103473 5 441 2.62E-35 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_09545 31ba497e017e4818b5e9087de72942ba 448 Gene3D G3DSA:1.20.1250.20 255 440 3.1E-10 T 13-10-2018 RPIT_09545 31ba497e017e4818b5e9087de72942ba 448 Gene3D G3DSA:1.20.1250.20 2 196 3.7E-23 T 13-10-2018 RPIT_03385 ca468a574dbabd4d33fc2386fa40162a 321 Gene3D G3DSA:3.40.50.2300 145 314 3.0E-85 T 13-10-2018 RPIT_03385 ca468a574dbabd4d33fc2386fa40162a 321 Gene3D G3DSA:3.40.50.2300 48 292 3.0E-85 T 13-10-2018 RPIT_03385 ca468a574dbabd4d33fc2386fa40162a 321 SUPERFAMILY SSF53822 38 286 5.14E-14 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_03385 ca468a574dbabd4d33fc2386fa40162a 321 Pfam PF04392 ABC transporter substrate binding protein 31 319 8.3E-88 T 13-10-2018 IPR007487 ABC transporter, substrate-binding protein RPIT_01065 cf1e52646fe91a300f52c655655e3a29 302 SUPERFAMILY SSF161098 70 292 1.44E-45 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_01065 cf1e52646fe91a300f52c655655e3a29 302 Gene3D G3DSA:1.10.3720.10 65 300 6.6E-54 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_01065 cf1e52646fe91a300f52c655655e3a29 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 293 1.4E-11 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_10245 8d9f07d35edf87666737dd48d4b9f4d1 167 Pfam PF00364 Biotin-requiring enzyme 100 165 5.0E-17 T 13-10-2018 IPR000089 Biotin/lipoyl attachment RPIT_10245 8d9f07d35edf87666737dd48d4b9f4d1 167 SUPERFAMILY SSF51230 92 167 1.44E-20 T 13-10-2018 IPR011053 Single hybrid motif RPIT_10245 8d9f07d35edf87666737dd48d4b9f4d1 167 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 123 140 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RPIT_10245 8d9f07d35edf87666737dd48d4b9f4d1 167 Gene3D G3DSA:2.40.50.100 92 167 4.9E-23 T 13-10-2018 RPIT_14015 08587e36d29db22ce669e7bbfce2951c 375 Pfam PF04230 Polysaccharide pyruvyl transferase 20 305 2.1E-21 T 13-10-2018 IPR007345 Polysaccharide pyruvyl transferase RPIT_10190 9fa987f9ca946fa1020711da4595ad8f 356 SUPERFAMILY SSF53187 1 351 7.8E-44 T 13-10-2018 RPIT_10190 9fa987f9ca946fa1020711da4595ad8f 356 Gene3D G3DSA:3.30.70.360 165 273 2.7E-95 T 13-10-2018 RPIT_10190 9fa987f9ca946fa1020711da4595ad8f 356 Pfam PF07687 Peptidase dimerisation domain 164 264 5.5E-16 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain RPIT_10190 9fa987f9ca946fa1020711da4595ad8f 356 Gene3D G3DSA:3.40.630.10 12 339 2.7E-95 T 13-10-2018 RPIT_10190 9fa987f9ca946fa1020711da4595ad8f 356 SUPERFAMILY SSF55031 165 265 4.34E-18 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain RPIT_10190 9fa987f9ca946fa1020711da4595ad8f 356 Pfam PF01546 Peptidase family M20/M25/M40 61 349 8.3E-24 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 RPIT_10190 9fa987f9ca946fa1020711da4595ad8f 356 TIGRFAM TIGR01900 dapE-gram_pos: succinyl-diaminopimelate desuccinylase 2 350 2.9E-148 T 13-10-2018 IPR010174 Succinyl-diaminopimelate desuccinylase, DapE GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 RPIT_03380 071166a5d17c76525f65ea5e2e63dca5 320 SUPERFAMILY SSF53822 46 245 8.25E-8 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_03380 071166a5d17c76525f65ea5e2e63dca5 320 Gene3D G3DSA:3.40.50.2300 143 313 2.2E-81 T 13-10-2018 RPIT_03380 071166a5d17c76525f65ea5e2e63dca5 320 Pfam PF04392 ABC transporter substrate binding protein 30 317 3.0E-80 T 13-10-2018 IPR007487 ABC transporter, substrate-binding protein RPIT_03380 071166a5d17c76525f65ea5e2e63dca5 320 Gene3D G3DSA:3.40.50.2300 46 290 2.2E-81 T 13-10-2018 RPIT_06920 22a29a572ff00f6d8c949b4e7d82dc40 979 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 237 610 4.7E-53 T 13-10-2018 RPIT_06920 22a29a572ff00f6d8c949b4e7d82dc40 979 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 10 184 4.6E-17 T 13-10-2018 RPIT_06920 22a29a572ff00f6d8c949b4e7d82dc40 979 Gene3D G3DSA:3.40.50.300 237 611 3.7E-54 T 13-10-2018 RPIT_06920 22a29a572ff00f6d8c949b4e7d82dc40 979 Gene3D G3DSA:1.10.486.10 321 525 3.7E-54 T 13-10-2018 RPIT_06920 22a29a572ff00f6d8c949b4e7d82dc40 979 SUPERFAMILY SSF52980 674 977 3.86E-30 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RPIT_06920 22a29a572ff00f6d8c949b4e7d82dc40 979 SUPERFAMILY SSF52540 235 612 5.04E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_06920 22a29a572ff00f6d8c949b4e7d82dc40 979 SUPERFAMILY SSF52540 5 184 2.07E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10695 2446adfb86ddd3358a9fbb243ea96843 165 Pfam PF04417 Protein of unknown function (DUF501) 27 150 6.1E-38 T 13-10-2018 IPR007511 Protein of unknown function DUF501 RPIT_09605 45e648d19f4148c59f6fd6a79733fcb7 339 Pfam PF13460 NAD(P)H-binding 3 155 1.3E-19 T 13-10-2018 IPR016040 NAD(P)-binding domain RPIT_09605 45e648d19f4148c59f6fd6a79733fcb7 339 SUPERFAMILY SSF51735 1 290 2.17E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_09605 45e648d19f4148c59f6fd6a79733fcb7 339 Gene3D G3DSA:3.40.50.720 1 265 2.5E-43 T 13-10-2018 RPIT_01940 de9a411a9255a49375a2e5b5fd17c61d 120 SUPERFAMILY SSF54427 25 117 2.19E-28 T 13-10-2018 IPR032710 NTF2-like domain superfamily RPIT_01940 de9a411a9255a49375a2e5b5fd17c61d 120 Gene3D G3DSA:3.10.450.50 3 119 2.9E-31 T 13-10-2018 RPIT_05750 c7328b66223f7dd4c21027350d3d968e 400 PIRSF PIRSF035875 4 296 4.2E-27 T 13-10-2018 IPR017039 Virulence factor BrkB RPIT_05750 c7328b66223f7dd4c21027350d3d968e 400 PIRSF PIRSF035875 366 393 990.0 T 13-10-2018 IPR017039 Virulence factor BrkB RPIT_05750 c7328b66223f7dd4c21027350d3d968e 400 Pfam PF03631 Virulence factor BrkB 29 283 3.7E-36 T 13-10-2018 IPR017039 Virulence factor BrkB RPIT_11755 7e6760bd6e0cc9b0d3f3d51e2c9271d0 291 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 33 283 9.8E-49 T 13-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 RPIT_11755 7e6760bd6e0cc9b0d3f3d51e2c9271d0 291 Gene3D G3DSA:3.40.190.100 117 226 9.7E-75 T 13-10-2018 RPIT_11755 7e6760bd6e0cc9b0d3f3d51e2c9271d0 291 SUPERFAMILY SSF53850 22 290 8.36E-61 T 13-10-2018 RPIT_11755 7e6760bd6e0cc9b0d3f3d51e2c9271d0 291 Gene3D G3DSA:3.40.190.10 35 290 9.7E-75 T 13-10-2018 RPIT_07730 01db614c0ac5a18925e33403f5844f08 72 SUPERFAMILY SSF47413 8 70 2.11E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_07730 01db614c0ac5a18925e33403f5844f08 72 Gene3D G3DSA:1.10.260.40 4 72 4.1E-11 T 13-10-2018 RPIT_07730 01db614c0ac5a18925e33403f5844f08 72 SMART SM00530 12 68 1.2E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_07730 01db614c0ac5a18925e33403f5844f08 72 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 12 71 1.6E-17 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_10990 02e276612b667ba3ba351e4b3ef8734f 483 SUPERFAMILY SSF49313 253 337 4.87E-13 T 13-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 RPIT_10990 02e276612b667ba3ba351e4b3ef8734f 483 Pfam PF05345 Putative Ig domain 195 232 8.9E-8 T 13-10-2018 IPR008009 Putative Ig RPIT_10990 02e276612b667ba3ba351e4b3ef8734f 483 Pfam PF05345 Putative Ig domain 284 324 2.0E-10 T 13-10-2018 IPR008009 Putative Ig RPIT_10990 02e276612b667ba3ba351e4b3ef8734f 483 Gene3D G3DSA:2.60.40.10 250 336 5.5E-21 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_10990 02e276612b667ba3ba351e4b3ef8734f 483 Gene3D G3DSA:2.60.40.10 152 245 2.4E-22 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_10990 02e276612b667ba3ba351e4b3ef8734f 483 SUPERFAMILY SSF49313 163 246 1.88E-11 T 13-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 RPIT_10990 02e276612b667ba3ba351e4b3ef8734f 483 Gene3D G3DSA:2.60.120.260 7 69 6.5E-11 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_10990 02e276612b667ba3ba351e4b3ef8734f 483 SUPERFAMILY SSF49785 9 65 6.45E-8 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_11650 83cbe34ca14ba2ac435ebf0bcea2ac21 341 Pfam PF13377 Periplasmic binding protein-like domain 175 333 2.3E-30 T 13-10-2018 RPIT_11650 83cbe34ca14ba2ac435ebf0bcea2ac21 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 13-10-2018 RPIT_11650 83cbe34ca14ba2ac435ebf0bcea2ac21 341 SUPERFAMILY SSF47413 3 64 2.0E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_11650 83cbe34ca14ba2ac435ebf0bcea2ac21 341 Gene3D G3DSA:1.10.260.40 1 59 1.0E-20 T 13-10-2018 RPIT_11650 83cbe34ca14ba2ac435ebf0bcea2ac21 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 53 9.9E-16 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_11650 83cbe34ca14ba2ac435ebf0bcea2ac21 341 Gene3D G3DSA:3.40.50.2300 165 298 3.1E-62 T 13-10-2018 RPIT_11650 83cbe34ca14ba2ac435ebf0bcea2ac21 341 Gene3D G3DSA:3.40.50.2300 60 314 3.1E-62 T 13-10-2018 RPIT_11650 83cbe34ca14ba2ac435ebf0bcea2ac21 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 8.7E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_11650 83cbe34ca14ba2ac435ebf0bcea2ac21 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 8.7E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_11650 83cbe34ca14ba2ac435ebf0bcea2ac21 341 SMART SM00354 4 76 5.0E-22 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_11650 83cbe34ca14ba2ac435ebf0bcea2ac21 341 SUPERFAMILY SSF53822 66 335 5.44E-55 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_04480 d053111808a6183f1df147ed5e922c65 202 PRINTS PR01576 Peptide deformylase signature 135 164 4.9E-30 T 13-10-2018 IPR023635 Peptide deformylase RPIT_04480 d053111808a6183f1df147ed5e922c65 202 PRINTS PR01576 Peptide deformylase signature 116 134 4.9E-30 T 13-10-2018 IPR023635 Peptide deformylase RPIT_04480 d053111808a6183f1df147ed5e922c65 202 PRINTS PR01576 Peptide deformylase signature 104 115 4.9E-30 T 13-10-2018 IPR023635 Peptide deformylase RPIT_04480 d053111808a6183f1df147ed5e922c65 202 PRINTS PR01576 Peptide deformylase signature 42 71 4.9E-30 T 13-10-2018 IPR023635 Peptide deformylase RPIT_04480 d053111808a6183f1df147ed5e922c65 202 Gene3D G3DSA:3.90.45.10 11 193 3.2E-53 T 13-10-2018 IPR036821 Peptide deformylase superfamily RPIT_04480 d053111808a6183f1df147ed5e922c65 202 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 15 174 2.2E-37 T 13-10-2018 IPR023635 Peptide deformylase RPIT_04480 d053111808a6183f1df147ed5e922c65 202 SUPERFAMILY SSF56420 12 183 1.44E-51 T 13-10-2018 IPR036821 Peptide deformylase superfamily RPIT_04480 d053111808a6183f1df147ed5e922c65 202 Hamap MF_00163 Peptide deformylase [def]. 11 177 26.97 T 13-10-2018 IPR023635 Peptide deformylase RPIT_04480 d053111808a6183f1df147ed5e922c65 202 Pfam PF01327 Polypeptide deformylase 13 166 2.6E-42 T 13-10-2018 IPR023635 Peptide deformylase RPIT_04480 d053111808a6183f1df147ed5e922c65 202 PIRSF PIRSF004749 2 189 1.3E-42 T 13-10-2018 IPR023635 Peptide deformylase RPIT_09025 ba204e3cd2b9ec1fa9220f4d8f568a7e 533 Gene3D G3DSA:3.40.50.300 34 246 4.7E-31 T 13-10-2018 RPIT_09025 ba204e3cd2b9ec1fa9220f4d8f568a7e 533 SUPERFAMILY SSF52540 46 232 5.85E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_09025 ba204e3cd2b9ec1fa9220f4d8f568a7e 533 Pfam PF01926 50S ribosome-binding GTPase 49 180 6.5E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 RPIT_01540 c91adc9f8c20289320427c0901f957af 179 SUPERFAMILY SSF50324 11 167 3.92E-53 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 RPIT_01540 c91adc9f8c20289320427c0901f957af 179 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 10 167 30.455 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 RPIT_01540 c91adc9f8c20289320427c0901f957af 179 Pfam PF00719 Inorganic pyrophosphatase 14 166 1.0E-50 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 RPIT_01540 c91adc9f8c20289320427c0901f957af 179 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 61 67 - T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 RPIT_01540 c91adc9f8c20289320427c0901f957af 179 Gene3D G3DSA:3.90.80.10 7 170 5.9E-61 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 RPIT_02115 d5e546ce92fd5d1a0a2e50a0c4e4f4a0 335 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 335 39.74 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RPIT_02115 d5e546ce92fd5d1a0a2e50a0c4e4f4a0 335 Gene3D G3DSA:3.20.20.70 2 335 1.3E-88 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_02115 d5e546ce92fd5d1a0a2e50a0c4e4f4a0 335 SUPERFAMILY SSF102114 5 307 7.59E-72 T 13-10-2018 RPIT_02115 d5e546ce92fd5d1a0a2e50a0c4e4f4a0 335 SMART SM00729 14 219 2.1E-7 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 RPIT_02115 d5e546ce92fd5d1a0a2e50a0c4e4f4a0 335 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 335 6.2E-111 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RPIT_02115 d5e546ce92fd5d1a0a2e50a0c4e4f4a0 335 Pfam PF13353 4Fe-4S single cluster domain 21 109 1.1E-5 T 13-10-2018 RPIT_02115 d5e546ce92fd5d1a0a2e50a0c4e4f4a0 335 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 316 2.4E-34 T 13-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RPIT_02115 d5e546ce92fd5d1a0a2e50a0c4e4f4a0 335 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 13-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RPIT_02115 d5e546ce92fd5d1a0a2e50a0c4e4f4a0 335 Pfam PF04055 Radical SAM superfamily 19 180 9.0E-31 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIT_09745 6dca1065c2ecc8ca525cd7f384655734 369 Gene3D G3DSA:3.30.565.10 235 365 1.4E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_09745 6dca1065c2ecc8ca525cd7f384655734 369 SMART SM00387 269 366 0.0016 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase RPIT_09745 6dca1065c2ecc8ca525cd7f384655734 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 363 1.8E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_09745 6dca1065c2ecc8ca525cd7f384655734 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 305 319 1.8E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_09745 6dca1065c2ecc8ca525cd7f384655734 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 344 1.8E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RPIT_09745 6dca1065c2ecc8ca525cd7f384655734 369 PIRSF PIRSF037434 2 369 8.1E-88 T 13-10-2018 IPR017205 Signal transduction histidine kinase, ChrS RPIT_09745 6dca1065c2ecc8ca525cd7f384655734 369 SUPERFAMILY SSF55874 228 365 8.56E-19 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_09745 6dca1065c2ecc8ca525cd7f384655734 369 Pfam PF07730 Histidine kinase 168 229 3.9E-12 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RPIT_09280 3901d9ab5eb5d7f82058ec78a4407fe4 133 SUPERFAMILY SSF54427 5 130 2.7E-23 T 13-10-2018 IPR032710 NTF2-like domain superfamily RPIT_09280 3901d9ab5eb5d7f82058ec78a4407fe4 133 Gene3D G3DSA:3.10.450.50 8 132 7.0E-32 T 13-10-2018 RPIT_09280 3901d9ab5eb5d7f82058ec78a4407fe4 133 Pfam PF12680 SnoaL-like domain 11 116 1.6E-14 T 13-10-2018 IPR037401 SnoaL-like domain RPIT_03870 69d684e24da41522794e3f3bd02b47eb 222 Pfam PF00005 ABC transporter 22 170 4.4E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_03870 69d684e24da41522794e3f3bd02b47eb 222 SUPERFAMILY SSF52540 4 220 7.14E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_03870 69d684e24da41522794e3f3bd02b47eb 222 Gene3D G3DSA:3.40.50.300 1 221 1.9E-56 T 13-10-2018 RPIT_03870 69d684e24da41522794e3f3bd02b47eb 222 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_03870 69d684e24da41522794e3f3bd02b47eb 222 SMART SM00382 31 218 2.0E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_14785 e3d3f0bca00aef1915d76c010c86aa7d 125 Gene3D G3DSA:1.10.1660.10 1 122 4.0E-30 T 13-10-2018 RPIT_14785 e3d3f0bca00aef1915d76c010c86aa7d 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 7 18 1.7E-8 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_14785 e3d3f0bca00aef1915d76c010c86aa7d 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 42 62 1.7E-8 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_14785 e3d3f0bca00aef1915d76c010c86aa7d 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 18 31 1.7E-8 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_14785 e3d3f0bca00aef1915d76c010c86aa7d 125 SUPERFAMILY SSF46955 7 119 2.75E-28 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily RPIT_14785 e3d3f0bca00aef1915d76c010c86aa7d 125 ProSitePatterns PS00552 MerR-type HTH domain signature. 9 31 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_14785 e3d3f0bca00aef1915d76c010c86aa7d 125 Pfam PF13411 MerR HTH family regulatory protein 7 73 4.9E-18 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_14785 e3d3f0bca00aef1915d76c010c86aa7d 125 SMART SM00422 6 75 1.1E-30 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIT_08000 b3c30d7345c14441b439e6f865edb815 290 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 7 270 14.044 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIT_08000 b3c30d7345c14441b439e6f865edb815 290 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 31 258 2.5E-46 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIT_08000 b3c30d7345c14441b439e6f865edb815 290 Pfam PF00902 Sec-independent protein translocase protein (TatC) 33 253 1.2E-51 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIT_08000 b3c30d7345c14441b439e6f865edb815 290 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 115 133 4.9E-30 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIT_08000 b3c30d7345c14441b439e6f865edb815 290 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 30 57 4.9E-30 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIT_08000 b3c30d7345c14441b439e6f865edb815 290 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 185 213 4.9E-30 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIT_08000 b3c30d7345c14441b439e6f865edb815 290 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 133 159 4.9E-30 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIT_11165 7748ca599cf0518090d31e9abe13eb08 127 SMART SM00357 3 65 3.7E-18 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 RPIT_11165 7748ca599cf0518090d31e9abe13eb08 127 Gene3D G3DSA:2.40.50.140 3 64 2.5E-18 T 13-10-2018 RPIT_11165 7748ca599cf0518090d31e9abe13eb08 127 SUPERFAMILY SSF50249 2 65 1.18E-15 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_11165 7748ca599cf0518090d31e9abe13eb08 127 Pfam PF00313 'Cold-shock' DNA-binding domain 3 63 1.6E-15 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIT_11165 7748ca599cf0518090d31e9abe13eb08 127 PRINTS PR00050 Cold shock protein signature 38 56 7.9E-11 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIT_11165 7748ca599cf0518090d31e9abe13eb08 127 PRINTS PR00050 Cold shock protein signature 4 19 7.9E-11 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIT_11165 7748ca599cf0518090d31e9abe13eb08 127 PRINTS PR00050 Cold shock protein signature 24 33 7.9E-11 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIT_05210 d1df6510bd4ca02c1d86a558742a56de 312 Gene3D G3DSA:3.40.366.10 3 278 3.2E-79 T 13-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 RPIT_05210 d1df6510bd4ca02c1d86a558742a56de 312 Gene3D G3DSA:3.30.70.250 125 188 3.2E-79 T 13-10-2018 RPIT_05210 d1df6510bd4ca02c1d86a558742a56de 312 SUPERFAMILY SSF55048 127 178 4.05E-10 T 13-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RPIT_05210 d1df6510bd4ca02c1d86a558742a56de 312 Pfam PF00698 Acyl transferase domain 5 221 2.5E-15 T 13-10-2018 IPR014043 Acyl transferase RPIT_05210 d1df6510bd4ca02c1d86a558742a56de 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 311 9.6E-17 T 13-10-2018 IPR020801 Polyketide synthase, acyl transferase domain RPIT_05210 d1df6510bd4ca02c1d86a558742a56de 312 SUPERFAMILY SSF52151 2 303 3.66E-62 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RPIT_04490 09deb840ab5c9a467ba9eec5921cbe50 292 Gene3D G3DSA:2.70.70.10 17 143 3.2E-22 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_04490 09deb840ab5c9a467ba9eec5921cbe50 292 Pfam PF01551 Peptidase family M23 47 138 5.5E-16 T 13-10-2018 IPR016047 Peptidase M23 RPIT_04490 09deb840ab5c9a467ba9eec5921cbe50 292 Pfam PF01551 Peptidase family M23 196 290 3.8E-25 T 13-10-2018 IPR016047 Peptidase M23 RPIT_04490 09deb840ab5c9a467ba9eec5921cbe50 292 SUPERFAMILY SSF51261 172 291 1.57E-44 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_04490 09deb840ab5c9a467ba9eec5921cbe50 292 SUPERFAMILY SSF51261 26 142 1.2E-18 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_04490 09deb840ab5c9a467ba9eec5921cbe50 292 Gene3D G3DSA:2.70.70.10 162 292 3.0E-39 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_02645 23c1e50773e0acad1a8991a5f3158b1a 426 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 58 69 - T 13-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02645 23c1e50773e0acad1a8991a5f3158b1a 426 SUPERFAMILY SSF56762 31 426 6.41E-116 T 13-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02645 23c1e50773e0acad1a8991a5f3158b1a 426 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 14 426 45.896 T 13-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02645 23c1e50773e0acad1a8991a5f3158b1a 426 Gene3D G3DSA:1.10.645.20 20 426 1.5E-156 T 13-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02645 23c1e50773e0acad1a8991a5f3158b1a 426 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 21 426 6.1E-165 T 13-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02645 23c1e50773e0acad1a8991a5f3158b1a 426 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 138 426 1.5E-103 T 13-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_12700 4b00812ee078d6d36fc14f6e3f857385 464 Pfam PF01098 Cell cycle protein 85 440 9.6E-74 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RPIT_01690 688951b37ceffc2d6e902cd93421cebb 33 Pfam PF08213 Mitochondrial domain of unknown function (DUF1713) 2 33 4.7E-11 T 13-10-2018 IPR013177 Domain of unknown function DUF1713 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_01690 688951b37ceffc2d6e902cd93421cebb 33 SMART SM01155 1 33 2.4E-6 T 13-10-2018 IPR013177 Domain of unknown function DUF1713 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_00440 f27be3ec54393cc0e6683641e73a2eaf 180 Pfam PF01965 DJ-1/PfpI family 7 175 3.5E-50 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 RPIT_00440 f27be3ec54393cc0e6683641e73a2eaf 180 Gene3D G3DSA:3.40.50.880 1 180 9.1E-50 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_00440 f27be3ec54393cc0e6683641e73a2eaf 180 SUPERFAMILY SSF52317 6 177 4.17E-43 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_00440 f27be3ec54393cc0e6683641e73a2eaf 180 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 8 176 7.6E-48 T 13-10-2018 IPR006286 Deglycase PfpI RPIT_05430 f1e7959f170c2bb43eb044c58572d7f6 1017 Pfam PF12705 PD-(D/E)XK nuclease superfamily 758 1009 8.1E-32 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type RPIT_05430 f1e7959f170c2bb43eb044c58572d7f6 1017 Gene3D G3DSA:1.10.10.160 102 194 5.8E-36 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily RPIT_05430 f1e7959f170c2bb43eb044c58572d7f6 1017 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 268 3.3E-23 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 RPIT_05430 f1e7959f170c2bb43eb044c58572d7f6 1017 Gene3D G3DSA:1.10.486.10 388 554 8.3E-32 T 13-10-2018 RPIT_05430 f1e7959f170c2bb43eb044c58572d7f6 1017 Gene3D G3DSA:3.40.50.300 4 271 5.8E-36 T 13-10-2018 RPIT_05430 f1e7959f170c2bb43eb044c58572d7f6 1017 Gene3D G3DSA:3.40.50.300 289 669 8.3E-32 T 13-10-2018 RPIT_05430 f1e7959f170c2bb43eb044c58572d7f6 1017 SUPERFAMILY SSF52540 2 669 1.58E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_05430 f1e7959f170c2bb43eb044c58572d7f6 1017 Pfam PF13361 UvrD-like helicase C-terminal domain 522 652 3.0E-12 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIT_01305 bae7c3e0a822d121cdaa5a8b54298d38 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 301 2.1E-37 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 RPIT_11495 6e7bd7c211d30c67d69fff71863712ff 360 Gene3D G3DSA:3.40.50.2300 180 312 1.7E-85 T 13-10-2018 RPIT_11495 6e7bd7c211d30c67d69fff71863712ff 360 SUPERFAMILY SSF53822 75 351 6.39E-63 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_11495 6e7bd7c211d30c67d69fff71863712ff 360 Gene3D G3DSA:3.40.50.2300 77 358 1.7E-85 T 13-10-2018 RPIT_11495 6e7bd7c211d30c67d69fff71863712ff 360 Pfam PF13407 Periplasmic binding protein domain 77 332 2.7E-50 T 13-10-2018 IPR025997 Periplasmic binding protein RPIT_07085 3b10be24f218df9b5646423cba73d323 347 Pfam PF00154 recA bacterial DNA recombination protein 8 269 2.7E-144 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIT_07085 3b10be24f218df9b5646423cba73d323 347 Hamap MF_00268 Protein RecA [recA]. 6 330 52.378 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIT_07085 3b10be24f218df9b5646423cba73d323 347 PRINTS PR00142 RecA protein signature 128 157 4.0E-85 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIT_07085 3b10be24f218df9b5646423cba73d323 347 PRINTS PR00142 RecA protein signature 298 315 4.0E-85 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIT_07085 3b10be24f218df9b5646423cba73d323 347 PRINTS PR00142 RecA protein signature 211 239 4.0E-85 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIT_07085 3b10be24f218df9b5646423cba73d323 347 PRINTS PR00142 RecA protein signature 166 195 4.0E-85 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIT_07085 3b10be24f218df9b5646423cba73d323 347 PRINTS PR00142 RecA protein signature 94 123 4.0E-85 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIT_07085 3b10be24f218df9b5646423cba73d323 347 PRINTS PR00142 RecA protein signature 244 273 4.0E-85 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIT_07085 3b10be24f218df9b5646423cba73d323 347 SMART SM00382 58 229 1.0E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_07085 3b10be24f218df9b5646423cba73d323 347 ProSitePatterns PS00321 recA signature. 214 222 - T 13-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 RPIT_07085 3b10be24f218df9b5646423cba73d323 347 Gene3D G3DSA:3.30.250.10 269 347 1.5E-27 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal RPIT_07085 3b10be24f218df9b5646423cba73d323 347 SUPERFAMILY SSF52540 6 268 5.75E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_07085 3b10be24f218df9b5646423cba73d323 347 Gene3D G3DSA:3.40.50.300 27 268 3.6E-84 T 13-10-2018 RPIT_07085 3b10be24f218df9b5646423cba73d323 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 5 324 3.3E-174 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIT_07085 3b10be24f218df9b5646423cba73d323 347 SUPERFAMILY SSF54752 269 327 4.71E-20 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal RPIT_03355 9a3a843fdd4d32bd279996dfd662334d 124 SUPERFAMILY SSF46946 2 121 1.96E-41 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RPIT_03355 9a3a843fdd4d32bd279996dfd662334d 124 Gene3D G3DSA:4.10.910.10 73 124 1.6E-22 T 13-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03355 9a3a843fdd4d32bd279996dfd662334d 124 PIRSF PIRSF002134 1 124 6.7E-41 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03355 9a3a843fdd4d32bd279996dfd662334d 124 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 7.3E-47 T 13-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03355 9a3a843fdd4d32bd279996dfd662334d 124 Pfam PF00416 Ribosomal protein S13/S18 3 109 7.2E-28 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03355 9a3a843fdd4d32bd279996dfd662334d 124 Gene3D G3DSA:1.10.8.50 1 72 1.7E-26 T 13-10-2018 RPIT_03355 9a3a843fdd4d32bd279996dfd662334d 124 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 13-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03355 9a3a843fdd4d32bd279996dfd662334d 124 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 25.161 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_07575 b6fe5b7a9cbd7ba78d3423c61f28f61d 469 Pfam PF13701 Transposase DDE domain group 1 10 465 1.1E-94 T 13-10-2018 IPR025668 Transposase DDE domain RPIT_02995 0994fffb619c4d5468c09421063f0dde 146 Pfam PF13430 Domain of unknown function (DUF4112) 3 100 5.4E-26 T 13-10-2018 IPR025187 Protein of unknown function DUF4112 RPIT_12860 fb1a934b286fd7be1a49b7021839ed6a 392 Gene3D G3DSA:3.40.50.720 2 206 3.2E-49 T 13-10-2018 RPIT_12860 fb1a934b286fd7be1a49b7021839ed6a 392 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 123 1.1E-9 T 13-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 RPIT_12860 fb1a934b286fd7be1a49b7021839ed6a 392 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 323 7.7E-21 T 13-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 RPIT_12860 fb1a934b286fd7be1a49b7021839ed6a 392 Gene3D G3DSA:1.10.1040.10 211 379 1.4E-41 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIT_12860 fb1a934b286fd7be1a49b7021839ed6a 392 SUPERFAMILY SSF51735 3 185 1.94E-15 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_12860 fb1a934b286fd7be1a49b7021839ed6a 392 SUPERFAMILY SSF48179 212 365 1.19E-21 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 RPIT_12230 0b98a27d00f1d254757f3f29095623bc 97 PIRSF PIRSF006909 1 97 9.9E-53 T 13-10-2018 IPR014447 Uncharacterised conserved protein UCP006909 RPIT_14190 3a885b21a604793650ab076e4c37963f 178 Gene3D G3DSA:3.40.50.360 1 177 8.8E-43 T 13-10-2018 IPR029039 Flavoprotein-like superfamily RPIT_14190 3a885b21a604793650ab076e4c37963f 178 Pfam PF03358 NADPH-dependent FMN reductase 1 146 3.2E-34 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RPIT_14190 3a885b21a604793650ab076e4c37963f 178 SUPERFAMILY SSF52218 1 172 1.09E-36 T 13-10-2018 IPR029039 Flavoprotein-like superfamily RPIT_13520 c41215ec7d23c8aa4d16c1ff359b14af 323 Gene3D G3DSA:1.10.10.60 3 51 4.1E-17 T 13-10-2018 RPIT_13520 c41215ec7d23c8aa4d16c1ff359b14af 323 SUPERFAMILY SSF100950 62 314 2.37E-63 T 13-10-2018 IPR037171 NagB/RpiA transferase-like RPIT_13520 c41215ec7d23c8aa4d16c1ff359b14af 323 Pfam PF04198 Putative sugar-binding domain 63 314 2.9E-59 T 13-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 RPIT_13520 c41215ec7d23c8aa4d16c1ff359b14af 323 Pfam PF04545 Sigma-70, region 4 13 46 3.5E-6 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 RPIT_13520 c41215ec7d23c8aa4d16c1ff359b14af 323 Gene3D G3DSA:3.40.50.1360 54 316 8.4E-75 T 13-10-2018 RPIT_06605 c575333203b9cbf122b49388d8d9841f 151 SUPERFAMILY SSF54593 9 146 1.07E-30 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_06605 c575333203b9cbf122b49388d8d9841f 151 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 11 143 2.2E-40 T 13-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 RPIT_06605 c575333203b9cbf122b49388d8d9841f 151 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 128 1.7E-20 T 13-10-2018 RPIT_06605 c575333203b9cbf122b49388d8d9841f 151 Gene3D G3DSA:3.10.180.10 3 147 5.7E-38 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_03825 089415d40327490d079e631cf139af41 348 Gene3D G3DSA:1.10.600.10 1 348 2.2E-96 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily RPIT_03825 089415d40327490d079e631cf139af41 348 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 226 238 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site RPIT_03825 089415d40327490d079e631cf139af41 348 SUPERFAMILY SSF48576 26 347 2.08E-69 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily RPIT_03825 089415d40327490d079e631cf139af41 348 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 78 92 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site RPIT_03825 089415d40327490d079e631cf139af41 348 Pfam PF00348 Polyprenyl synthetase 31 298 5.6E-52 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 RPIT_05080 29644b2cb163853519bc757654ffd6a6 99 Gene3D G3DSA:3.30.70.100 1 92 1.1E-10 T 13-10-2018 RPIT_05080 29644b2cb163853519bc757654ffd6a6 99 Pfam PF03992 Antibiotic biosynthesis monooxygenase 17 60 1.6E-5 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain RPIT_05080 29644b2cb163853519bc757654ffd6a6 99 SUPERFAMILY SSF54909 11 66 1.73E-8 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel RPIT_04335 b48b7980c8673bd576b877b3c13e4d71 223 Pfam PF01022 Bacterial regulatory protein, arsR family 9 51 8.0E-10 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_04335 b48b7980c8673bd576b877b3c13e4d71 223 SUPERFAMILY SSF46785 9 193 8.53E-29 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_04335 b48b7980c8673bd576b877b3c13e4d71 223 SMART SM00418 2 89 0.0035 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIT_04335 b48b7980c8673bd576b877b3c13e4d71 223 Gene3D G3DSA:1.10.10.10 4 92 1.1E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_09770 37fc3c1d20ae1f302ef7d05afa29a4c1 430 Pfam PF02653 Branched-chain amino acid transport system / permease component 133 408 2.6E-34 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 RPIT_10045 0f5c196e18e90162b1e698842049f318 215 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 172 9.0E-41 T 13-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 RPIT_10045 0f5c196e18e90162b1e698842049f318 215 Gene3D G3DSA:3.30.420.40 5 184 8.4E-36 T 13-10-2018 RPIT_10045 0f5c196e18e90162b1e698842049f318 215 SUPERFAMILY SSF53067 3 101 4.75E-18 T 13-10-2018 RPIT_10045 0f5c196e18e90162b1e698842049f318 215 Pfam PF00814 Glycoprotease family 33 154 2.2E-24 T 13-10-2018 IPR000905 Gcp-like domain RPIT_10045 0f5c196e18e90162b1e698842049f318 215 SUPERFAMILY SSF53067 112 163 1.94E-6 T 13-10-2018 RPIT_10045 0f5c196e18e90162b1e698842049f318 215 Gene3D G3DSA:3.30.420.40 95 177 8.4E-36 T 13-10-2018 RPIT_00360 4ddc3abdc6967e4d8a864d972edc3a9c 507 SUPERFAMILY SSF51230 3 88 2.09E-24 T 13-10-2018 IPR011053 Single hybrid motif RPIT_00360 4ddc3abdc6967e4d8a864d972edc3a9c 507 Pfam PF02817 e3 binding domain 172 206 2.4E-13 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 RPIT_00360 4ddc3abdc6967e4d8a864d972edc3a9c 507 SUPERFAMILY SSF52777 268 506 4.05E-72 T 13-10-2018 RPIT_00360 4ddc3abdc6967e4d8a864d972edc3a9c 507 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 273 505 1.2E-71 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 RPIT_00360 4ddc3abdc6967e4d8a864d972edc3a9c 507 Gene3D G3DSA:3.30.559.10 267 504 1.5E-72 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 RPIT_00360 4ddc3abdc6967e4d8a864d972edc3a9c 507 Gene3D G3DSA:2.40.50.100 2 85 4.8E-21 T 13-10-2018 RPIT_00360 4ddc3abdc6967e4d8a864d972edc3a9c 507 SUPERFAMILY SSF47005 165 209 5.75E-11 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 RPIT_00360 4ddc3abdc6967e4d8a864d972edc3a9c 507 Gene3D G3DSA:4.10.320.10 164 211 1.3E-14 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 RPIT_00360 4ddc3abdc6967e4d8a864d972edc3a9c 507 Pfam PF00364 Biotin-requiring enzyme 4 76 2.5E-18 T 13-10-2018 IPR000089 Biotin/lipoyl attachment RPIT_13380 fd7ed0952d889842113d3a2a91c19125 324 Gene3D G3DSA:3.20.20.100 1 317 1.6E-102 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily RPIT_13380 fd7ed0952d889842113d3a2a91c19125 324 Pfam PF00248 Aldo/keto reductase family 15 310 5.9E-66 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain RPIT_13380 fd7ed0952d889842113d3a2a91c19125 324 SUPERFAMILY SSF51430 1 313 1.44E-89 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily RPIT_13700 0e07b79abc9c7feb38c481d54279c2dc 427 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 22 391 1.0E-88 T 13-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 RPIT_13700 0e07b79abc9c7feb38c481d54279c2dc 427 Pfam PF06965 Na+/H+ antiporter 1 19 392 8.3E-122 T 13-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 RPIT_13700 0e07b79abc9c7feb38c481d54279c2dc 427 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 15 399 19.518 T 13-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 RPIT_13700 0e07b79abc9c7feb38c481d54279c2dc 427 Gene3D G3DSA:1.20.1530.10 13 401 1.1E-125 T 13-10-2018 IPR023171 Na/H antiporter domain superfamily RPIT_04945 5040e8d5418a0d2c4aee6c0412677b1c 192 Gene3D G3DSA:2.60.120.200 5 191 2.6E-48 T 13-10-2018 RPIT_04945 5040e8d5418a0d2c4aee6c0412677b1c 192 Pfam PF07081 Protein of unknown function (DUF1349) 11 186 1.3E-49 T 13-10-2018 IPR009784 Protein of unknown function DUF1349 RPIT_04945 5040e8d5418a0d2c4aee6c0412677b1c 192 SUPERFAMILY SSF49899 18 185 8.86E-12 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RPIT_03310 56673343bedecea2df76204118314460 334 Gene3D G3DSA:3.40.50.720 4 316 9.4E-100 T 13-10-2018 RPIT_03310 56673343bedecea2df76204118314460 334 Gene3D G3DSA:3.30.360.10 142 265 9.4E-100 T 13-10-2018 RPIT_03310 56673343bedecea2df76204118314460 334 SUPERFAMILY SSF55347 130 287 6.93E-19 T 13-10-2018 RPIT_03310 56673343bedecea2df76204118314460 334 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 192 4.1E-5 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 RPIT_03310 56673343bedecea2df76204118314460 334 SUPERFAMILY SSF51735 3 151 1.48E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_03310 56673343bedecea2df76204118314460 334 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 123 2.1E-25 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 RPIT_03310 56673343bedecea2df76204118314460 334 Hamap MF_01671 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [iolG]. 1 334 45.398 T 13-10-2018 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase GO:0019310|GO:0050112|GO:0055114 KEGG: 00521+1.1.1.18|KEGG: 00562+1.1.1.18|MetaCyc: PWY-5940|MetaCyc: PWY-7237|MetaCyc: PWY-7241 RPIT_11055 1ce7943baf6d9c889b02ef66e51e0190 458 Gene3D G3DSA:3.90.550.10 2 361 5.1E-132 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_11055 1ce7943baf6d9c889b02ef66e51e0190 458 SUPERFAMILY SSF53448 66 440 2.44E-71 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_11055 1ce7943baf6d9c889b02ef66e51e0190 458 Pfam PF01704 UTP--glucose-1-phosphate uridylyltransferase 32 435 9.8E-117 T 13-10-2018 IPR002618 UDPGP family GO:0070569 RPIT_11055 1ce7943baf6d9c889b02ef66e51e0190 458 Gene3D G3DSA:2.160.10.10 362 458 1.4E-27 T 13-10-2018 RPIT_11055 1ce7943baf6d9c889b02ef66e51e0190 458 PIRSF PIRSF000806 1 458 6.3E-133 T 13-10-2018 IPR016267 UTP--glucose-1-phosphate uridylyltransferase GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817|Reactome: R-HSA-173599|Reactome: R-HSA-3322077 RPIT_07245 e5ebd57ccc4563444514e90f22fff4f6 145 Gene3D G3DSA:1.20.1260.10 76 145 2.7E-11 T 13-10-2018 IPR012347 Ferritin-like RPIT_07245 e5ebd57ccc4563444514e90f22fff4f6 145 Pfam PF03713 Domain of unknown function (DUF305) 91 141 5.0E-11 T 13-10-2018 IPR005183 Domain of unknown function DUF305 RPIT_08095 ce10403eb96654c77095f52fecc79aae 298 Hamap MF_00361 NAD kinase [nadK]. 4 287 29.093 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 RPIT_08095 ce10403eb96654c77095f52fecc79aae 298 Gene3D G3DSA:3.40.50.10330 62 285 2.4E-79 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 RPIT_08095 ce10403eb96654c77095f52fecc79aae 298 Gene3D G3DSA:2.60.200.30 126 264 2.4E-79 T 13-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 RPIT_08095 ce10403eb96654c77095f52fecc79aae 298 SUPERFAMILY SSF111331 5 293 1.07E-72 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily RPIT_08095 ce10403eb96654c77095f52fecc79aae 298 Pfam PF01513 ATP-NAD kinase 62 271 4.8E-52 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 RPIT_01250 6ab9e34d89e9727f4559d58d76c47b36 573 SMART SM00919 281 541 2.7E-118 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 RPIT_01250 6ab9e34d89e9727f4559d58d76c47b36 573 Pfam PF03949 Malic enzyme, NAD binding domain 281 540 8.3E-97 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 RPIT_01250 6ab9e34d89e9727f4559d58d76c47b36 573 Pfam PF00390 Malic enzyme, N-terminal domain 90 271 4.8E-65 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RPIT_01250 6ab9e34d89e9727f4559d58d76c47b36 573 PRINTS PR00072 Malic enzyme signature 277 293 2.4E-64 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 RPIT_01250 6ab9e34d89e9727f4559d58d76c47b36 573 PRINTS PR00072 Malic enzyme signature 252 270 2.4E-64 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 RPIT_01250 6ab9e34d89e9727f4559d58d76c47b36 573 PRINTS PR00072 Malic enzyme signature 95 119 2.4E-64 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 RPIT_01250 6ab9e34d89e9727f4559d58d76c47b36 573 PRINTS PR00072 Malic enzyme signature 419 435 2.4E-64 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 RPIT_01250 6ab9e34d89e9727f4559d58d76c47b36 573 PRINTS PR00072 Malic enzyme signature 308 324 2.4E-64 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 RPIT_01250 6ab9e34d89e9727f4559d58d76c47b36 573 PRINTS PR00072 Malic enzyme signature 193 215 2.4E-64 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 RPIT_01250 6ab9e34d89e9727f4559d58d76c47b36 573 PRINTS PR00072 Malic enzyme signature 157 186 2.4E-64 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 RPIT_01250 6ab9e34d89e9727f4559d58d76c47b36 573 SMART SM01274 89 271 6.4E-83 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RPIT_01250 6ab9e34d89e9727f4559d58d76c47b36 573 SUPERFAMILY SSF53223 12 280 5.11E-93 T 13-10-2018 RPIT_01250 6ab9e34d89e9727f4559d58d76c47b36 573 Gene3D G3DSA:3.40.50.10380 23 278 6.9E-96 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 RPIT_01250 6ab9e34d89e9727f4559d58d76c47b36 573 SUPERFAMILY SSF51735 281 569 3.08E-89 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_01250 6ab9e34d89e9727f4559d58d76c47b36 573 PIRSF PIRSF000106 3 572 4.1E-206 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 RPIT_01250 6ab9e34d89e9727f4559d58d76c47b36 573 Gene3D G3DSA:3.40.50.720 279 573 2.6E-102 T 13-10-2018 RPIT_00520 a34295edb159e6a3612e5930d5033818 391 SUPERFAMILY SSF53756 2 379 2.66E-37 T 13-10-2018 RPIT_00520 a34295edb159e6a3612e5930d5033818 391 Pfam PF13692 Glycosyl transferases group 1 238 349 1.0E-7 T 13-10-2018 RPIT_00520 a34295edb159e6a3612e5930d5033818 391 Gene3D G3DSA:3.40.50.2000 206 365 6.4E-14 T 13-10-2018 RPIT_00520 a34295edb159e6a3612e5930d5033818 391 Pfam PF13439 Glycosyltransferase Family 4 15 197 2.0E-18 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RPIT_00520 a34295edb159e6a3612e5930d5033818 391 Gene3D G3DSA:3.40.50.2000 1 205 7.3E-24 T 13-10-2018 RPIT_01730 c90235321f1c4768ef62f55b057c2e52 483 Pfam PF10646 Sporulation and spore germination 257 349 2.5E-5 T 13-10-2018 IPR019606 GerMN domain RPIT_04595 8da6632d80b7fd64fad53eebbb89dab5 87 Gene3D G3DSA:3.30.1230.10 1 73 2.5E-11 T 13-10-2018 IPR035931 YlxR-like superfamily RPIT_04595 8da6632d80b7fd64fad53eebbb89dab5 87 SUPERFAMILY SSF64376 3 66 7.85E-14 T 13-10-2018 IPR035931 YlxR-like superfamily RPIT_04595 8da6632d80b7fd64fad53eebbb89dab5 87 Pfam PF04296 Protein of unknown function (DUF448) 5 64 1.5E-13 T 13-10-2018 IPR007393 Domain of unknown function DUF448 RPIT_10285 e43780cfee42ba7a1239355c9968906e 171 SUPERFAMILY SSF53271 7 159 9.83E-27 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like RPIT_10285 e43780cfee42ba7a1239355c9968906e 171 Pfam PF00156 Phosphoribosyl transferase domain 15 158 7.8E-24 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIT_10285 e43780cfee42ba7a1239355c9968906e 171 Gene3D G3DSA:3.40.50.2020 11 166 1.3E-38 T 13-10-2018 RPIT_12750 5b3efb20026b38d2dab29b7c56ed2100 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 287 5.6E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_12750 5b3efb20026b38d2dab29b7c56ed2100 302 SUPERFAMILY SSF161098 31 302 4.84E-58 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_12750 5b3efb20026b38d2dab29b7c56ed2100 302 Gene3D G3DSA:1.10.3720.10 30 293 2.2E-51 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_05235 d18757854d2d796cbe2383b7bf1c3cc4 339 Gene3D G3DSA:3.20.20.140 94 339 1.3E-64 T 13-10-2018 RPIT_05235 d18757854d2d796cbe2383b7bf1c3cc4 339 SUPERFAMILY SSF89550 99 327 2.35E-46 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 RPIT_05235 d18757854d2d796cbe2383b7bf1c3cc4 339 SMART SM00481 100 178 1.7E-16 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal RPIT_05235 d18757854d2d796cbe2383b7bf1c3cc4 339 Gene3D G3DSA:1.10.150.110 2 74 2.8E-8 T 13-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily RPIT_05235 d18757854d2d796cbe2383b7bf1c3cc4 339 SUPERFAMILY SSF47802 4 67 1.13E-9 T 13-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily RPIT_05235 d18757854d2d796cbe2383b7bf1c3cc4 339 Pfam PF02811 PHP domain 101 204 1.7E-7 T 13-10-2018 IPR004013 PHP domain GO:0003824 RPIT_05235 d18757854d2d796cbe2383b7bf1c3cc4 339 Pfam PF14716 Helix-hairpin-helix domain 5 63 4.6E-12 T 13-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain RPIT_02045 1ac9aa0ea2a7b789597b02ca2dba8e24 142 Gene3D G3DSA:3.90.79.10 2 135 2.6E-24 T 13-10-2018 RPIT_02045 1ac9aa0ea2a7b789597b02ca2dba8e24 142 SUPERFAMILY SSF55811 5 135 9.88E-24 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 RPIT_02045 1ac9aa0ea2a7b789597b02ca2dba8e24 142 Pfam PF00293 NUDIX domain 5 118 1.6E-16 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 RPIT_07300 fb3a38980978f46a6dbe90834ec80e98 103 Gene3D G3DSA:3.30.70.100 1 73 4.6E-6 T 13-10-2018 RPIT_07300 fb3a38980978f46a6dbe90834ec80e98 103 SUPERFAMILY SSF55008 3 74 6.94E-7 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 RPIT_04235 dcb2292be3746752160a05d7fb88b51f 215 Gene3D G3DSA:1.10.3720.10 1 213 1.7E-41 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_04235 dcb2292be3746752160a05d7fb88b51f 215 SUPERFAMILY SSF161098 8 197 3.27E-35 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_04235 dcb2292be3746752160a05d7fb88b51f 215 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 211 3.3E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_04235 dcb2292be3746752160a05d7fb88b51f 215 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 105 1.7E-20 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 RPIT_02940 71f3c73f80b52f6013174df3cbc7046a 387 SUPERFAMILY SSF53067 88 385 5.76E-41 T 13-10-2018 RPIT_02940 71f3c73f80b52f6013174df3cbc7046a 387 Gene3D G3DSA:1.10.10.10 8 81 1.8E-12 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_02940 71f3c73f80b52f6013174df3cbc7046a 387 Pfam PF00480 ROK family 89 381 4.6E-45 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 RPIT_02940 71f3c73f80b52f6013174df3cbc7046a 387 SUPERFAMILY SSF46785 12 78 4.9E-8 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_02940 71f3c73f80b52f6013174df3cbc7046a 387 Gene3D G3DSA:3.30.420.40 94 378 5.9E-67 T 13-10-2018 RPIT_02940 71f3c73f80b52f6013174df3cbc7046a 387 Gene3D G3DSA:3.30.420.40 210 369 5.9E-67 T 13-10-2018 RPIT_12570 4c71a0026bb14cdcf720d3607820e01b 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 2.6E-16 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_12570 4c71a0026bb14cdcf720d3607820e01b 220 Gene3D G3DSA:1.10.357.10 1 206 2.5E-58 T 13-10-2018 RPIT_12570 4c71a0026bb14cdcf720d3607820e01b 220 SUPERFAMILY SSF46689 7 76 4.41E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_12570 4c71a0026bb14cdcf720d3607820e01b 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.0E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_12570 4c71a0026bb14cdcf720d3607820e01b 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.0E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_05140 170f9fc6fb91af7a93c60f477432486a 275 Gene3D G3DSA:3.30.70.1020 111 190 4.5E-29 T 13-10-2018 RPIT_05140 170f9fc6fb91af7a93c60f477432486a 275 SUPERFAMILY SSF56784 26 271 2.62E-29 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_05140 170f9fc6fb91af7a93c60f477432486a 275 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 27 271 5.3E-27 T 13-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 RPIT_05140 170f9fc6fb91af7a93c60f477432486a 275 Pfam PF02358 Trehalose-phosphatase 29 240 4.2E-23 T 13-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 RPIT_05140 170f9fc6fb91af7a93c60f477432486a 275 Gene3D G3DSA:3.40.50.1000 27 228 4.5E-29 T 13-10-2018 IPR023214 HAD superfamily RPIT_00895 ed58051059c74c91b3d8ecc24ada5767 332 Gene3D G3DSA:3.40.50.2300 69 305 1.3E-52 T 13-10-2018 RPIT_00895 ed58051059c74c91b3d8ecc24ada5767 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 54 1.2E-13 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_00895 ed58051059c74c91b3d8ecc24ada5767 332 Pfam PF13377 Periplasmic binding protein-like domain 170 327 1.6E-25 T 13-10-2018 RPIT_00895 ed58051059c74c91b3d8ecc24ada5767 332 SUPERFAMILY SSF47413 9 67 7.69E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_00895 ed58051059c74c91b3d8ecc24ada5767 332 Gene3D G3DSA:1.10.260.40 9 67 7.8E-19 T 13-10-2018 RPIT_00895 ed58051059c74c91b3d8ecc24ada5767 332 SMART SM00354 9 79 5.7E-27 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RPIT_00895 ed58051059c74c91b3d8ecc24ada5767 332 Gene3D G3DSA:3.40.50.2300 161 287 1.3E-52 T 13-10-2018 RPIT_00895 ed58051059c74c91b3d8ecc24ada5767 332 SUPERFAMILY SSF53822 68 329 2.17E-47 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_09825 5c254f354435da2ac179d517a04a1d4f 184 Pfam PF07884 Vitamin K epoxide reductase family 1 128 4.7E-23 T 13-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 RPIT_09825 5c254f354435da2ac179d517a04a1d4f 184 Gene3D G3DSA:1.20.1440.130 1 156 2.9E-13 T 13-10-2018 IPR038354 VKOR domain superfamily Reactome: R-HSA-6806664 RPIT_09825 5c254f354435da2ac179d517a04a1d4f 184 SMART SM00756 1 135 3.6E-24 T 13-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 RPIT_04565 9eefbfafbb521a1ea96a76bae28d5a84 310 Gene3D G3DSA:1.20.1260.10 178 303 4.2E-5 T 13-10-2018 IPR012347 Ferritin-like RPIT_04565 9eefbfafbb521a1ea96a76bae28d5a84 310 SUPERFAMILY SSF47240 183 309 2.43E-6 T 13-10-2018 IPR009078 Ferritin-like superfamily RPIT_03175 0d6f391817107268c1f11c885965dbfb 201 Gene3D G3DSA:3.30.160.20 24 94 4.8E-29 T 13-10-2018 RPIT_03175 0d6f391817107268c1f11c885965dbfb 201 SUPERFAMILY SSF54211 101 180 2.3E-24 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RPIT_03175 0d6f391817107268c1f11c885965dbfb 201 ProSitePatterns PS00585 Ribosomal protein S5 signature. 50 82 - T 13-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site RPIT_03175 0d6f391817107268c1f11c885965dbfb 201 Pfam PF03719 Ribosomal protein S5, C-terminal domain 109 179 7.0E-28 T 13-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIT_03175 0d6f391817107268c1f11c885965dbfb 201 SUPERFAMILY SSF54768 31 98 9.94E-22 T 13-10-2018 RPIT_03175 0d6f391817107268c1f11c885965dbfb 201 Gene3D G3DSA:3.30.230.10 96 188 3.7E-35 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIT_03175 0d6f391817107268c1f11c885965dbfb 201 Pfam PF00333 Ribosomal protein S5, N-terminal domain 35 97 6.1E-27 T 13-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIT_03175 0d6f391817107268c1f11c885965dbfb 201 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 31 185 4.4E-68 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RPIT_03175 0d6f391817107268c1f11c885965dbfb 201 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 185 34.489 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RPIT_12640 f09a022e347caf74b96fa44088e2ea13 289 Gene3D G3DSA:3.90.550.10 1 288 5.1E-76 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_12640 f09a022e347caf74b96fa44088e2ea13 289 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 1.1E-136 T 13-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 RPIT_12640 f09a022e347caf74b96fa44088e2ea13 289 SUPERFAMILY SSF53448 1 286 1.15E-80 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_12640 f09a022e347caf74b96fa44088e2ea13 289 Pfam PF00483 Nucleotidyl transferase 3 237 3.6E-64 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 RPIT_08325 2579a5f8053f593b3375ac092d9fd56d 216 SUPERFAMILY SSF53254 1 195 1.16E-46 T 13-10-2018 IPR029033 Histidine phosphatase superfamily RPIT_08325 2579a5f8053f593b3375ac092d9fd56d 216 Gene3D G3DSA:3.40.50.1240 1 202 3.0E-49 T 13-10-2018 IPR029033 Histidine phosphatase superfamily RPIT_08325 2579a5f8053f593b3375ac092d9fd56d 216 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 191 7.8E-48 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_08325 2579a5f8053f593b3375ac092d9fd56d 216 PIRSF PIRSF000709 2 182 6.7E-5 T 13-10-2018 RPIT_08325 2579a5f8053f593b3375ac092d9fd56d 216 SMART SM00855 3 153 1.3E-18 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_10330 c678822c73c8e5725768171744c60a78 138 Pfam PF00581 Rhodanese-like domain 32 129 6.6E-13 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_10330 c678822c73c8e5725768171744c60a78 138 Gene3D G3DSA:3.40.250.10 8 137 1.7E-32 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_10330 c678822c73c8e5725768171744c60a78 138 SUPERFAMILY SSF52821 15 135 1.31E-27 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_10330 c678822c73c8e5725768171744c60a78 138 SMART SM00450 28 132 1.9E-19 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_07810 adb1d8be078c27a030c5288e2c6aa843 78 Gene3D G3DSA:1.10.1220.10 10 60 6.2E-14 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RPIT_07810 adb1d8be078c27a030c5288e2c6aa843 78 SUPERFAMILY SSF47598 3 67 3.2E-13 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 RPIT_02735 72286fb9c9144ed16c836b7625913688 453 Pfam PF04434 SWIM zinc finger 73 90 9.6E-4 T 13-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 RPIT_02925 d6eee97947b97f52e795299a93c9ecee 392 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 378 1.4E-40 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 RPIT_04535 f6f7ec6799941b8394811a408c265fbf 400 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 142 9.0E-41 T 13-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 RPIT_04535 f6f7ec6799941b8394811a408c265fbf 400 SUPERFAMILY SSF55347 136 272 5.56E-50 T 13-10-2018 RPIT_04535 f6f7ec6799941b8394811a408c265fbf 400 PIRSF PIRSF006205 1 400 9.9E-137 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 RPIT_04535 f6f7ec6799941b8394811a408c265fbf 400 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 394 2.1E-115 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 RPIT_04535 f6f7ec6799941b8394811a408c265fbf 400 Pfam PF13288 DXP reductoisomerase C-terminal domain 270 390 1.6E-35 T 13-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 RPIT_04535 f6f7ec6799941b8394811a408c265fbf 400 Gene3D G3DSA:1.10.1740.10 310 398 3.6E-25 T 13-10-2018 RPIT_04535 f6f7ec6799941b8394811a408c265fbf 400 SUPERFAMILY SSF51735 2 150 7.21E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_04535 f6f7ec6799941b8394811a408c265fbf 400 Gene3D G3DSA:3.40.50.720 1 158 2.5E-47 T 13-10-2018 RPIT_04535 f6f7ec6799941b8394811a408c265fbf 400 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 154 237 5.6E-33 T 13-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 RPIT_04535 f6f7ec6799941b8394811a408c265fbf 400 SUPERFAMILY SSF69055 301 396 1.83E-25 T 13-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 RPIT_04535 f6f7ec6799941b8394811a408c265fbf 400 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 395 43.233 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 RPIT_14300 1693cc46f6257347a3fd4ecc64ef9ec8 249 SUPERFAMILY SSF159888 141 246 3.14E-18 T 13-10-2018 RPIT_14300 1693cc46f6257347a3fd4ecc64ef9ec8 249 Pfam PF08818 Domain of unknown function (DU1801) 154 244 2.4E-8 T 13-10-2018 IPR014922 Domain of unknown function DUF1801 RPIT_14300 1693cc46f6257347a3fd4ecc64ef9ec8 249 Pfam PF08818 Domain of unknown function (DU1801) 24 127 6.8E-10 T 13-10-2018 IPR014922 Domain of unknown function DUF1801 RPIT_14300 1693cc46f6257347a3fd4ecc64ef9ec8 249 Gene3D G3DSA:1.10.10.810 137 249 1.5E-12 T 13-10-2018 RPIT_14255 758b7c6bb2cecbae25a9ba9e9370576c 357 PIRSF PIRSF006468 2 357 3.3E-125 T 13-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 RPIT_14255 758b7c6bb2cecbae25a9ba9e9370576c 357 SUPERFAMILY SSF56752 4 354 3.4E-108 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 RPIT_14255 758b7c6bb2cecbae25a9ba9e9370576c 357 Gene3D G3DSA:3.30.470.10 27 353 1.5E-125 T 13-10-2018 RPIT_14255 758b7c6bb2cecbae25a9ba9e9370576c 357 Gene3D G3DSA:3.20.10.10 174 340 1.5E-125 T 13-10-2018 RPIT_14255 758b7c6bb2cecbae25a9ba9e9370576c 357 Pfam PF01063 Amino-transferase class IV 72 311 2.7E-31 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 RPIT_14255 758b7c6bb2cecbae25a9ba9e9370576c 357 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 46 357 9.6E-117 T 13-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 RPIT_04935 3fa4bb2224619871a7e4b1ea6788d47c 167 Gene3D G3DSA:3.60.21.10 1 161 8.5E-37 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like RPIT_04935 3fa4bb2224619871a7e4b1ea6788d47c 167 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 107 131 - T 13-10-2018 IPR020935 Phosphodiesterase YfcE, conserved site RPIT_04935 3fa4bb2224619871a7e4b1ea6788d47c 167 SUPERFAMILY SSF56300 1 162 8.39E-35 T 13-10-2018 RPIT_04935 3fa4bb2224619871a7e4b1ea6788d47c 167 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 153 4.8E-27 T 13-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 RPIT_04935 3fa4bb2224619871a7e4b1ea6788d47c 167 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 151 9.6E-28 T 13-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 RPIT_10635 8a055399b0e0c6f3aee89cab4b099e27 279 Pfam PF12811 Bax inhibitor 1 like 32 278 1.1E-74 T 13-10-2018 IPR010539 Protein of unknown function UCP009160 RPIT_10635 8a055399b0e0c6f3aee89cab4b099e27 279 PIRSF PIRSF009160 2 279 5.9E-67 T 13-10-2018 IPR010539 Protein of unknown function UCP009160 RPIT_01790 ed57dc1f405368500ecbd56d198024e4 214 Gene3D G3DSA:1.10.10.10 110 213 3.8E-34 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_01790 ed57dc1f405368500ecbd56d198024e4 214 SUPERFAMILY SSF46894 107 204 5.95E-31 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIT_01790 ed57dc1f405368500ecbd56d198024e4 214 SMART SM00862 131 204 4.5E-29 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_01790 ed57dc1f405368500ecbd56d198024e4 214 Gene3D G3DSA:3.40.50.2300 3 109 1.5E-24 T 13-10-2018 RPIT_01790 ed57dc1f405368500ecbd56d198024e4 214 Pfam PF00486 Transcriptional regulatory protein, C terminal 131 204 8.5E-28 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_08705 f53639d1b7bada2ca16aab801240833c 191 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 124 130 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RPIT_08705 f53639d1b7bada2ca16aab801240833c 191 Gene3D G3DSA:3.40.50.150 1 191 6.3E-53 T 13-10-2018 RPIT_08705 f53639d1b7bada2ca16aab801240833c 191 Pfam PF03602 Conserved hypothetical protein 95 2 187 6.4E-46 T 13-10-2018 RPIT_08705 f53639d1b7bada2ca16aab801240833c 191 PIRSF PIRSF004553 1 191 1.3E-48 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 RPIT_08705 f53639d1b7bada2ca16aab801240833c 191 SUPERFAMILY SSF53335 2 187 9.23E-41 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_08705 f53639d1b7bada2ca16aab801240833c 191 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 3 187 1.4E-37 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 RPIT_02155 60e49f223bff8d012835d1a14a838855 462 Gene3D G3DSA:1.20.1250.20 234 460 2.9E-44 T 13-10-2018 RPIT_02155 60e49f223bff8d012835d1a14a838855 462 Gene3D G3DSA:1.20.1250.20 3 233 1.2E-60 T 13-10-2018 RPIT_02155 60e49f223bff8d012835d1a14a838855 462 SUPERFAMILY SSF103473 8 453 3.14E-32 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_02155 60e49f223bff8d012835d1a14a838855 462 Pfam PF07690 Major Facilitator Superfamily 37 421 2.3E-10 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIT_07590 a6efa0aa7b5cf58d1c0d376ba6001e3d 1541 SUPERFAMILY SSF53335 287 1110 1.72E-33 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_07590 a6efa0aa7b5cf58d1c0d376ba6001e3d 1541 Gene3D G3DSA:3.40.50.150 501 672 1.5E-17 T 13-10-2018 RPIT_14495 1881066300b053c0471bf94ebd5da89a 213 SUPERFAMILY SSF52266 23 204 1.02E-30 T 13-10-2018 RPIT_14495 1881066300b053c0471bf94ebd5da89a 213 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 27 193 4.0E-24 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain RPIT_14495 1881066300b053c0471bf94ebd5da89a 213 Gene3D G3DSA:3.40.50.1110 24 205 4.8E-29 T 13-10-2018 IPR036514 SGNH hydrolase superfamily RPIT_13280 e93312f7343dc4819a378839a6855b02 319 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 309 9.7E-37 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 RPIT_00795 a81944b2faf611e179c9654acf38e702 373 SUPERFAMILY SSF51905 4 295 1.29E-10 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_00795 a81944b2faf611e179c9654acf38e702 373 Pfam PF05834 Lycopene cyclase protein 6 361 5.8E-40 T 13-10-2018 RPIT_00795 a81944b2faf611e179c9654acf38e702 373 Gene3D G3DSA:3.50.50.60 2 295 5.2E-7 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 52 465 36.946 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 SUPERFAMILY SSF50621 301 465 4.81E-45 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 SUPERFAMILY SSF51419 63 328 2.45E-69 T 13-10-2018 IPR029066 PLP-binding barrel RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 PRINTS PR01181 Diaminopimelate decarboxylase signature 432 454 6.0E-22 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 PRINTS PR01181 Diaminopimelate decarboxylase signature 110 127 6.0E-22 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 PRINTS PR01181 Diaminopimelate decarboxylase signature 199 208 6.0E-22 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 PRINTS PR01181 Diaminopimelate decarboxylase signature 349 367 6.0E-22 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 Gene3D G3DSA:2.40.37.10 50 461 2.6E-148 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 Gene3D G3DSA:3.20.20.10 71 326 2.6E-148 T 13-10-2018 IPR029066 PLP-binding barrel RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 92 110 - T 13-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 42 464 3.2E-129 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 264 279 - T 13-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 72 325 2.0E-61 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 326 421 1.5E-14 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 112 124 8.6E-14 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 92 110 8.6E-14 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 316 335 8.6E-14 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 422 435 8.6E-14 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RPIT_06750 8dc962154719b0d7c26fd794f1999b99 467 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 227 240 8.6E-14 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RPIT_08005 a73f8ae730dd5d386fec1848d7335e15 101 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 8 47 4.2E-16 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RPIT_08005 a73f8ae730dd5d386fec1848d7335e15 101 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 4 87 17.235 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RPIT_08005 a73f8ae730dd5d386fec1848d7335e15 101 Pfam PF02416 mttA/Hcf106 family 8 49 3.5E-17 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RPIT_05305 76c00660192dc9c9535e04e3db63efb5 471 Pfam PF01551 Peptidase family M23 367 465 1.0E-25 T 13-10-2018 IPR016047 Peptidase M23 RPIT_05305 76c00660192dc9c9535e04e3db63efb5 471 Gene3D G3DSA:2.70.70.10 315 469 5.2E-44 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_05305 76c00660192dc9c9535e04e3db63efb5 471 SUPERFAMILY SSF51261 305 466 6.28E-50 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_01635 7ca0d699289a02deddeaf7ecd8e12b22 347 Gene3D G3DSA:3.40.190.10 134 341 3.5E-106 T 13-10-2018 RPIT_01635 7ca0d699289a02deddeaf7ecd8e12b22 347 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 36 340 9.9E-74 T 13-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 RPIT_01635 7ca0d699289a02deddeaf7ecd8e12b22 347 Gene3D G3DSA:3.40.190.10 39 315 3.5E-106 T 13-10-2018 RPIT_01635 7ca0d699289a02deddeaf7ecd8e12b22 347 Pfam PF13343 Bacterial extracellular solute-binding protein 86 310 1.5E-24 T 13-10-2018 RPIT_01635 7ca0d699289a02deddeaf7ecd8e12b22 347 SUPERFAMILY SSF53850 37 342 1.0E-56 T 13-10-2018 RPIT_02740 bf99b74d7a52f5193b5693f4e67488ce 134 SUPERFAMILY SSF56770 4 126 2.49E-25 T 13-10-2018 RPIT_02740 bf99b74d7a52f5193b5693f4e67488ce 134 Gene3D G3DSA:3.40.50.12280 2 131 1.8E-31 T 13-10-2018 RPIT_02740 bf99b74d7a52f5193b5693f4e67488ce 134 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 40 124 1.8E-12 T 13-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_05725 42d166b631ac7432699ceda5915cec45 250 Pfam PF05949 Bacterial protein of unknown function (DUF881) 109 242 2.6E-30 T 13-10-2018 IPR010273 Protein of unknown function DUF881 RPIT_05725 42d166b631ac7432699ceda5915cec45 250 Gene3D G3DSA:3.30.70.1880 108 250 4.6E-37 T 13-10-2018 RPIT_10120 57a9e4bcd35f88d8f56d971c5360bbc7 424 Gene3D G3DSA:1.25.60.10 153 274 1.2E-22 T 13-10-2018 IPR038076 MgtE, N-terminal domain superfamily RPIT_10120 57a9e4bcd35f88d8f56d971c5360bbc7 424 Pfam PF03448 MgtE intracellular N domain 176 276 2.3E-23 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain RPIT_10120 57a9e4bcd35f88d8f56d971c5360bbc7 424 Gene3D G3DSA:3.10.580.10 275 404 2.0E-26 T 13-10-2018 RPIT_10120 57a9e4bcd35f88d8f56d971c5360bbc7 424 SUPERFAMILY SSF158791 164 276 2.09E-28 T 13-10-2018 RPIT_10120 57a9e4bcd35f88d8f56d971c5360bbc7 424 Pfam PF00571 CBS domain 355 402 5.2E-5 T 13-10-2018 IPR000644 CBS domain RPIT_10120 57a9e4bcd35f88d8f56d971c5360bbc7 424 SMART SM00924 176 279 2.9E-29 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain RPIT_10120 57a9e4bcd35f88d8f56d971c5360bbc7 424 Pfam PF05239 PRC-barrel domain 7 35 8.0E-5 T 13-10-2018 IPR027275 PRC-barrel domain RPIT_10120 57a9e4bcd35f88d8f56d971c5360bbc7 424 SUPERFAMILY SSF54631 278 410 9.83E-24 T 13-10-2018 RPIT_03020 16f82412f26a03839917344ab30acc3a 191 Pfam PF00929 Exonuclease 11 172 7.1E-14 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIT_03020 16f82412f26a03839917344ab30acc3a 191 SMART SM00479 8 181 2.4E-26 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIT_03020 16f82412f26a03839917344ab30acc3a 191 Gene3D G3DSA:3.30.420.10 4 183 6.4E-28 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 RPIT_03020 16f82412f26a03839917344ab30acc3a 191 SUPERFAMILY SSF53098 6 178 1.38E-34 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily RPIT_14865 9bdca612d3f9e5827c49fcc64ad928ff 163 Gene3D G3DSA:3.40.1260.10 1 163 9.8E-32 T 13-10-2018 IPR027396 DsrEFH-like RPIT_14865 9bdca612d3f9e5827c49fcc64ad928ff 163 Pfam PF13686 DsrE/DsrF/DrsH-like family 2 160 2.1E-33 T 13-10-2018 IPR032836 DsrE2-like family RPIT_14865 9bdca612d3f9e5827c49fcc64ad928ff 163 SUPERFAMILY SSF75169 2 152 2.36E-15 T 13-10-2018 IPR027396 DsrEFH-like RPIT_12360 069e37452fb75347e1ab813a6d0c0f05 456 SUPERFAMILY SSF103473 10 453 4.19E-80 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_12360 069e37452fb75347e1ab813a6d0c0f05 456 ProSitePatterns PS00216 Sugar transport proteins signature 1. 313 328 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIT_12360 069e37452fb75347e1ab813a6d0c0f05 456 ProSitePatterns PS00216 Sugar transport proteins signature 1. 77 93 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIT_12360 069e37452fb75347e1ab813a6d0c0f05 456 ProSitePatterns PS00217 Sugar transport proteins signature 2. 119 144 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIT_12360 069e37452fb75347e1ab813a6d0c0f05 456 Pfam PF00083 Sugar (and other) transporter 55 455 1.7E-53 T 13-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RPIT_12360 069e37452fb75347e1ab813a6d0c0f05 456 Gene3D G3DSA:1.20.1250.20 20 456 8.6E-88 T 13-10-2018 RPIT_02295 0ad97b8fa8f3db8d6dd20ed919eeee22 256 SMART SM00382 103 236 4.9E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_02295 0ad97b8fa8f3db8d6dd20ed919eeee22 256 Gene3D G3DSA:3.40.50.300 66 252 8.5E-47 T 13-10-2018 RPIT_02295 0ad97b8fa8f3db8d6dd20ed919eeee22 256 PIRSF PIRSF003073 4 256 3.1E-78 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein RPIT_02295 0ad97b8fa8f3db8d6dd20ed919eeee22 256 SUPERFAMILY SSF52540 98 241 5.88E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_02295 0ad97b8fa8f3db8d6dd20ed919eeee22 256 Pfam PF01695 IstB-like ATP binding protein 62 235 1.5E-60 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 RPIT_10445 87c752d4c8ba07e8cf7747c55869d8d1 93 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 93 7.6E-16 T 13-10-2018 IPR007711 Toxin HigB-1 RPIT_10445 87c752d4c8ba07e8cf7747c55869d8d1 93 SUPERFAMILY SSF143011 5 93 2.16E-12 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily RPIT_10445 87c752d4c8ba07e8cf7747c55869d8d1 93 Gene3D G3DSA:3.30.2310.20 1 93 2.0E-20 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily RPIT_06980 57b41cec26c4b4d6890872e5bcfbacde 133 Gene3D G3DSA:2.30.110.10 6 132 4.3E-25 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 RPIT_06980 57b41cec26c4b4d6890872e5bcfbacde 133 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 14 93 2.8E-20 T 13-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related RPIT_06980 57b41cec26c4b4d6890872e5bcfbacde 133 SUPERFAMILY SSF50475 12 94 2.0E-16 T 13-10-2018 RPIT_02350 4e0cff3afb3e14acf03a6e73b8d6ac71 236 Pfam PF00005 ABC transporter 28 175 5.4E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_02350 4e0cff3afb3e14acf03a6e73b8d6ac71 236 SMART SM00382 35 224 6.2E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_02350 4e0cff3afb3e14acf03a6e73b8d6ac71 236 Gene3D G3DSA:3.40.50.300 10 233 2.5E-61 T 13-10-2018 RPIT_02350 4e0cff3afb3e14acf03a6e73b8d6ac71 236 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_02350 4e0cff3afb3e14acf03a6e73b8d6ac71 236 SUPERFAMILY SSF52540 10 227 1.46E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_09810 0a96215cfcc301f25787c67e3c80b987 114 Pfam PF04341 Protein of unknown function, DUF485 20 107 2.5E-33 T 13-10-2018 IPR007436 Protein of unknown function DUF485 RPIT_09495 f1269debdb560192778ebaa370a28b7e 202 Gene3D G3DSA:3.90.950.10 3 201 1.3E-72 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like RPIT_09495 f1269debdb560192778ebaa370a28b7e 202 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 7 198 5.4E-50 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 RPIT_09495 f1269debdb560192778ebaa370a28b7e 202 Pfam PF01725 Ham1 family 7 196 2.9E-57 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 RPIT_09495 f1269debdb560192778ebaa370a28b7e 202 SUPERFAMILY SSF52972 6 200 1.75E-66 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like RPIT_09495 f1269debdb560192778ebaa370a28b7e 202 Hamap MF_01405 dITP/XTP pyrophosphatase. 5 200 48.472 T 13-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 RPIT_01285 ee656902f8a776644939efa6bede4391 254 SUPERFAMILY SSF48317 24 232 2.62E-36 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily RPIT_01285 ee656902f8a776644939efa6bede4391 254 Gene3D G3DSA:1.20.144.10 139 250 3.2E-27 T 13-10-2018 RPIT_01285 ee656902f8a776644939efa6bede4391 254 Gene3D G3DSA:1.20.144.10 49 138 6.6E-8 T 13-10-2018 RPIT_01285 ee656902f8a776644939efa6bede4391 254 SMART SM00014 105 221 2.4E-21 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIT_01285 ee656902f8a776644939efa6bede4391 254 Pfam PF01569 PAP2 superfamily 108 224 2.8E-23 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIT_14565 1e66e5edeaa4734d901db9423604cb87 534 Pfam PF02254 TrkA-N domain 393 508 4.4E-15 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RPIT_14565 1e66e5edeaa4734d901db9423604cb87 534 Pfam PF00999 Sodium/hydrogen exchanger family 7 351 1.7E-31 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RPIT_14565 1e66e5edeaa4734d901db9423604cb87 534 Gene3D G3DSA:1.20.1530.20 2 360 1.6E-40 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily RPIT_14565 1e66e5edeaa4734d901db9423604cb87 534 SUPERFAMILY SSF51735 392 521 4.57E-13 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_14565 1e66e5edeaa4734d901db9423604cb87 534 Gene3D G3DSA:3.40.50.720 384 527 9.4E-25 T 13-10-2018 RPIT_05985 b9b6f8c8ceb28a52e725a06799755a17 263 SUPERFAMILY SSF53448 11 226 6.88E-42 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_05985 b9b6f8c8ceb28a52e725a06799755a17 263 Pfam PF00535 Glycosyl transferase family 2 15 177 2.9E-28 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RPIT_05985 b9b6f8c8ceb28a52e725a06799755a17 263 Gene3D G3DSA:3.90.550.10 2 251 9.5E-44 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_08690 373d4483785b25384fa349f7cc01a29d 63 Pfam PF01783 Ribosomal L32p protein family 2 54 6.1E-20 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08690 373d4483785b25384fa349f7cc01a29d 63 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 5.4E-19 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08690 373d4483785b25384fa349f7cc01a29d 63 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 61 16.889 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08690 373d4483785b25384fa349f7cc01a29d 63 SUPERFAMILY SSF57829 1 54 6.71E-16 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 RPIT_03330 4cb5a22827926f21b9a2d162fbe98e7e 378 SMART SM00829 17 374 3.0E-10 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIT_03330 4cb5a22827926f21b9a2d162fbe98e7e 378 Gene3D G3DSA:3.90.180.10 14 367 6.2E-106 T 13-10-2018 RPIT_03330 4cb5a22827926f21b9a2d162fbe98e7e 378 Gene3D G3DSA:3.40.50.720 183 320 6.2E-106 T 13-10-2018 RPIT_03330 4cb5a22827926f21b9a2d162fbe98e7e 378 SUPERFAMILY SSF50129 4 208 6.39E-53 T 13-10-2018 IPR011032 GroES-like superfamily RPIT_03330 4cb5a22827926f21b9a2d162fbe98e7e 378 Pfam PF00107 Zinc-binding dehydrogenase 206 332 8.4E-31 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIT_03330 4cb5a22827926f21b9a2d162fbe98e7e 378 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 163 4.6E-29 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIT_03330 4cb5a22827926f21b9a2d162fbe98e7e 378 SUPERFAMILY SSF51735 168 343 1.79E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_09920 f3fd1071aa0eb725083329abfeb32a99 90 Pfam PF04024 PspC domain 2 57 4.7E-19 T 13-10-2018 IPR007168 Phage shock protein, PspC, N-terminal RPIT_07680 3555f3353607c3e45945d656b67fa1b4 155 SUPERFAMILY SSF55961 4 153 7.24E-14 T 13-10-2018 RPIT_07680 3555f3353607c3e45945d656b67fa1b4 155 Gene3D G3DSA:3.30.530.20 2 154 5.5E-6 T 13-10-2018 IPR023393 START-like domain superfamily RPIT_05765 cd9909dc78e42e8b5993b4dc1639f926 140 Pfam PF07811 TadE-like protein 9 50 9.7E-7 T 13-10-2018 IPR012495 TadE-like RPIT_14765 e3bf4bf05af8dcafcdfe2aff9a634add 668 Pfam PF03639 Glycosyl hydrolase family 81 264 658 9.6E-66 T 13-10-2018 IPR005200 Endo-1,3(4)-beta-glucanase GO:0052861 RPIT_14840 0657be257fe28811ffb3d58799a9deff 447 Gene3D G3DSA:3.40.190.10 139 425 4.0E-42 T 13-10-2018 RPIT_14840 0657be257fe28811ffb3d58799a9deff 447 Gene3D G3DSA:3.40.190.10 55 373 4.0E-42 T 13-10-2018 RPIT_14840 0657be257fe28811ffb3d58799a9deff 447 Pfam PF13416 Bacterial extracellular solute-binding protein 53 373 6.1E-42 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein RPIT_14840 0657be257fe28811ffb3d58799a9deff 447 SUPERFAMILY SSF53850 34 438 3.75E-36 T 13-10-2018 RPIT_13360 a9de8e02e1035c022e322f5e63f4a472 200 Pfam PF03596 Cadmium resistance transporter 14 197 1.5E-30 T 13-10-2018 IPR004676 Cadmium resistance transporter RPIT_14060 5b1c26fa011715f3267d9419381c0a0e 626 SUPERFAMILY SSF53448 315 520 9.38E-51 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_14060 5b1c26fa011715f3267d9419381c0a0e 626 Gene3D G3DSA:3.90.550.10 285 533 6.5E-51 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_14060 5b1c26fa011715f3267d9419381c0a0e 626 Pfam PF14907 Uncharacterised nucleotidyltransferase 16 195 1.1E-10 T 13-10-2018 IPR039498 Uncharacterised nucleotidyltransferase RPIT_14060 5b1c26fa011715f3267d9419381c0a0e 626 Pfam PF00535 Glycosyl transferase family 2 318 431 2.9E-35 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RPIT_07995 ca29d0699769445bf9bd2d737d5d8ff8 304 Gene3D G3DSA:3.40.50.10330 3 138 5.9E-30 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 RPIT_07995 ca29d0699769445bf9bd2d737d5d8ff8 304 SUPERFAMILY SSF111331 11 303 7.19E-69 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily RPIT_07995 ca29d0699769445bf9bd2d737d5d8ff8 304 SMART SM00046 10 134 8.4E-4 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 RPIT_07995 ca29d0699769445bf9bd2d737d5d8ff8 304 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 12 303 5.1E-45 T 13-10-2018 IPR005218 Diacylglycerol/lipid kinase RPIT_07995 ca29d0699769445bf9bd2d737d5d8ff8 304 Pfam PF00781 Diacylglycerol kinase catalytic domain 11 135 1.8E-26 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 RPIT_07995 ca29d0699769445bf9bd2d737d5d8ff8 304 Gene3D G3DSA:2.60.200.40 140 295 2.0E-40 T 13-10-2018 RPIT_01535 e6c5bb6a09699ec46c8e0049dc50da90 112 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 2 112 14.552 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RPIT_01535 e6c5bb6a09699ec46c8e0049dc50da90 112 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 4 107 9.0E-18 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RPIT_11585 e4fbe69493d91621195ca1415e0e7875 180 SUPERFAMILY SSF101874 8 179 4.45E-57 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily RPIT_11585 e4fbe69493d91621195ca1415e0e7875 180 Pfam PF04264 YceI-like domain 10 175 8.8E-45 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIT_11585 e4fbe69493d91621195ca1415e0e7875 180 Gene3D G3DSA:2.40.128.110 9 180 3.3E-55 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily RPIT_11585 e4fbe69493d91621195ca1415e0e7875 180 SMART SM00867 9 177 3.3E-68 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIT_06880 14e7a879b2060cbde53846deaa7c31f9 334 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 204 210 9.7E-6 T 13-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 RPIT_06880 14e7a879b2060cbde53846deaa7c31f9 334 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 271 284 9.7E-6 T 13-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 RPIT_06880 14e7a879b2060cbde53846deaa7c31f9 334 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 258 270 9.7E-6 T 13-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 RPIT_06880 14e7a879b2060cbde53846deaa7c31f9 334 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 110 120 9.7E-6 T 13-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 RPIT_06880 14e7a879b2060cbde53846deaa7c31f9 334 Pfam PF00248 Aldo/keto reductase family 15 314 2.9E-76 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain RPIT_06880 14e7a879b2060cbde53846deaa7c31f9 334 SUPERFAMILY SSF51430 1 315 5.37E-98 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily RPIT_06880 14e7a879b2060cbde53846deaa7c31f9 334 Gene3D G3DSA:3.20.20.100 1 327 4.9E-112 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily RPIT_14675 3fa27b19c2aaf58034fa6b6460a61e7f 166 SUPERFAMILY SSF55729 9 155 1.36E-26 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_14675 3fa27b19c2aaf58034fa6b6460a61e7f 166 Gene3D G3DSA:3.40.630.30 3 153 1.1E-32 T 13-10-2018 RPIT_14675 3fa27b19c2aaf58034fa6b6460a61e7f 166 Pfam PF00583 Acetyltransferase (GNAT) family 31 143 3.3E-14 T 13-10-2018 IPR000182 GNAT domain RPIT_00905 aae2a61cec7ad75b148fe91bb9c8a699 334 SUPERFAMILY SSF51658 1 330 1.35E-47 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily RPIT_00905 aae2a61cec7ad75b148fe91bb9c8a699 334 Pfam PF07582 AP endonuclease family 2 C terminus 286 326 8.5E-6 T 13-10-2018 IPR011418 AP endonuclease, family 2, C-terminal RPIT_00905 aae2a61cec7ad75b148fe91bb9c8a699 334 Pfam PF01261 Xylose isomerase-like TIM barrel 20 252 1.1E-33 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain RPIT_00905 aae2a61cec7ad75b148fe91bb9c8a699 334 Gene3D G3DSA:3.20.20.150 1 327 6.5E-68 T 13-10-2018 RPIT_07395 abd591598400a7dae64f439abcf74aa2 205 Gene3D G3DSA:3.40.50.300 19 171 1.7E-10 T 13-10-2018 RPIT_07395 abd591598400a7dae64f439abcf74aa2 205 SUPERFAMILY SSF52540 23 165 1.76E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10395 f778aae43a7f32b59ac9c966c181f0b1 470 SMART SM00507 329 381 1.1E-8 T 13-10-2018 IPR003615 HNH nuclease RPIT_10395 f778aae43a7f32b59ac9c966c181f0b1 470 Pfam PF02720 Domain of unknown function (DUF222) 57 338 6.7E-38 T 13-10-2018 IPR003870 Domain of unknown function DUF222 RPIT_02825 c9cbf6b9ddedce662e3ad057169834f9 388 Pfam PF07687 Peptidase dimerisation domain 183 281 4.5E-16 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain RPIT_02825 c9cbf6b9ddedce662e3ad057169834f9 388 SUPERFAMILY SSF55031 183 286 2.36E-29 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain RPIT_02825 c9cbf6b9ddedce662e3ad057169834f9 388 Gene3D G3DSA:3.30.70.360 182 296 4.6E-89 T 13-10-2018 RPIT_02825 c9cbf6b9ddedce662e3ad057169834f9 388 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 22 372 2.2E-68 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 RPIT_02825 c9cbf6b9ddedce662e3ad057169834f9 388 Pfam PF01546 Peptidase family M20/M25/M40 74 353 5.3E-18 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 RPIT_02825 c9cbf6b9ddedce662e3ad057169834f9 388 Gene3D G3DSA:3.40.630.10 22 362 4.6E-89 T 13-10-2018 RPIT_02825 c9cbf6b9ddedce662e3ad057169834f9 388 SUPERFAMILY SSF53187 11 378 1.89E-46 T 13-10-2018 RPIT_10440 5ac0a21d955eb6da6a4a290842458c09 100 SUPERFAMILY SSF47413 11 95 3.29E-27 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 RPIT_10440 5ac0a21d955eb6da6a4a290842458c09 100 Gene3D G3DSA:1.10.260.40 2 99 7.5E-35 T 13-10-2018 RPIT_10440 5ac0a21d955eb6da6a4a290842458c09 100 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 7 85 7.6E-32 T 13-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 RPIT_10440 5ac0a21d955eb6da6a4a290842458c09 100 SMART SM00530 16 71 1.5E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_10440 5ac0a21d955eb6da6a4a290842458c09 100 Pfam PF01381 Helix-turn-helix 24 70 8.7E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIT_07265 214ae2e6df3962ce99d8613ce1bfce6d 259 SMART SM00448 31 141 1.5E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_07265 214ae2e6df3962ce99d8613ce1bfce6d 259 Gene3D G3DSA:1.10.10.10 158 259 1.6E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_07265 214ae2e6df3962ce99d8613ce1bfce6d 259 SUPERFAMILY SSF46894 157 255 1.19E-28 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIT_07265 214ae2e6df3962ce99d8613ce1bfce6d 259 SUPERFAMILY SSF52172 27 152 4.84E-38 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_07265 214ae2e6df3962ce99d8613ce1bfce6d 259 Pfam PF00486 Transcriptional regulatory protein, C terminal 180 255 3.2E-25 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_07265 214ae2e6df3962ce99d8613ce1bfce6d 259 Gene3D G3DSA:3.40.50.2300 20 157 3.6E-33 T 13-10-2018 RPIT_07265 214ae2e6df3962ce99d8613ce1bfce6d 259 SMART SM00862 179 255 2.7E-26 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIT_07265 214ae2e6df3962ce99d8613ce1bfce6d 259 Pfam PF00072 Response regulator receiver domain 33 142 4.7E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_14525 eafa3acca63cb82a0e28dda2056ddb61 285 Pfam PF07859 alpha/beta hydrolase fold 70 246 6.4E-13 T 13-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 RPIT_14525 eafa3acca63cb82a0e28dda2056ddb61 285 SUPERFAMILY SSF53474 34 271 6.15E-38 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_14525 eafa3acca63cb82a0e28dda2056ddb61 285 Gene3D G3DSA:3.40.50.1820 10 280 7.3E-61 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_11950 f52cc6a799a8ad9439d053fdd6729ef3 434 Gene3D G3DSA:3.40.190.10 50 432 2.8E-64 T 13-10-2018 RPIT_11950 f52cc6a799a8ad9439d053fdd6729ef3 434 SUPERFAMILY SSF53850 22 429 3.48E-59 T 13-10-2018 RPIT_11950 f52cc6a799a8ad9439d053fdd6729ef3 434 Pfam PF01547 Bacterial extracellular solute-binding protein 65 337 2.0E-29 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein RPIT_03760 28a10b45791671072f7c0742dabb3681 169 PIRSF PIRSF001467 1 168 4.9E-54 T 13-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 RPIT_03760 28a10b45791671072f7c0742dabb3681 169 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 53 70 - T 13-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 RPIT_03760 28a10b45791671072f7c0742dabb3681 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 2.5E-26 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 RPIT_03760 28a10b45791671072f7c0742dabb3681 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 58 70 2.5E-26 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 RPIT_03760 28a10b45791671072f7c0742dabb3681 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 2.5E-26 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 RPIT_03760 28a10b45791671072f7c0742dabb3681 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 2.5E-26 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 RPIT_03760 28a10b45791671072f7c0742dabb3681 169 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 2.5E-26 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 RPIT_03760 28a10b45791671072f7c0742dabb3681 169 SUPERFAMILY SSF50891 3 167 1.9E-62 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily RPIT_03760 28a10b45791671072f7c0742dabb3681 169 Gene3D G3DSA:2.40.100.10 1 169 5.6E-71 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily RPIT_03760 28a10b45791671072f7c0742dabb3681 169 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 166 5.5E-45 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 RPIT_08650 d05084b0ded5fa304964495e96edb552 305 SMART SM00382 26 204 2.8E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_08650 d05084b0ded5fa304964495e96edb552 305 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_08650 d05084b0ded5fa304964495e96edb552 305 Pfam PF00005 ABC transporter 17 156 1.4E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_08650 d05084b0ded5fa304964495e96edb552 305 Gene3D G3DSA:3.40.50.300 1 237 5.1E-59 T 13-10-2018 RPIT_08650 d05084b0ded5fa304964495e96edb552 305 SUPERFAMILY SSF52540 2 219 3.75E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_09480 a471ee416a92cad7d4c6e14eb3f4780b 160 PRINTS PR00070 Dihydrofolate reductase signature 94 108 1.9E-7 T 13-10-2018 RPIT_09480 a471ee416a92cad7d4c6e14eb3f4780b 160 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.9E-7 T 13-10-2018 RPIT_09480 a471ee416a92cad7d4c6e14eb3f4780b 160 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.9E-7 T 13-10-2018 RPIT_09480 a471ee416a92cad7d4c6e14eb3f4780b 160 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.9E-7 T 13-10-2018 RPIT_09480 a471ee416a92cad7d4c6e14eb3f4780b 160 PIRSF PIRSF000194 1 157 5.2E-53 T 13-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 RPIT_09480 a471ee416a92cad7d4c6e14eb3f4780b 160 SUPERFAMILY SSF53597 1 152 8.46E-47 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 RPIT_09480 a471ee416a92cad7d4c6e14eb3f4780b 160 Pfam PF00186 Dihydrofolate reductase 3 146 1.7E-48 T 13-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RPIT_09480 a471ee416a92cad7d4c6e14eb3f4780b 160 Gene3D G3DSA:3.40.430.10 1 157 3.0E-48 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 RPIT_14530 5b8bba52d7228decd0807f9326deecbb 304 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 48 261 3.6E-49 T 13-10-2018 IPR018713 Domain of unknown function DUF2236 RPIT_09090 8ba1dcd711d89ee9083d9ca14a83f03e 217 SUPERFAMILY SSF51735 2 186 7.75E-24 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_09090 8ba1dcd711d89ee9083d9ca14a83f03e 217 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 112 140 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIT_09090 8ba1dcd711d89ee9083d9ca14a83f03e 217 Pfam PF00106 short chain dehydrogenase 1 159 1.7E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_09090 8ba1dcd711d89ee9083d9ca14a83f03e 217 Gene3D G3DSA:3.40.50.720 1 195 3.8E-20 T 13-10-2018 RPIT_05440 53914c790c35d0491025b3bfce41a19f 282 Gene3D G3DSA:3.90.79.10 142 276 2.0E-33 T 13-10-2018 RPIT_05440 53914c790c35d0491025b3bfce41a19f 282 SUPERFAMILY SSF55811 94 273 2.84E-36 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 RPIT_05440 53914c790c35d0491025b3bfce41a19f 282 ProSitePatterns PS00893 Nudix box signature. 175 196 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RPIT_05440 53914c790c35d0491025b3bfce41a19f 282 Pfam PF00293 NUDIX domain 145 247 2.2E-15 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 RPIT_11230 c867b0e9c6b5bd5fa972064c2c17a072 269 Pfam PF09335 SNARE associated Golgi protein 97 219 2.7E-10 T 13-10-2018 IPR032816 SNARE associated Golgi protein RPIT_02135 35a361f6c13ee50d7a1313fbc7535613 523 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 361 441 3.5E-29 T 13-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 RPIT_02135 35a361f6c13ee50d7a1313fbc7535613 523 Pfam PF13247 4Fe-4S dicluster domain 178 273 9.2E-36 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIT_02135 35a361f6c13ee50d7a1313fbc7535613 523 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 484 1.3E-222 T 13-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 RPIT_02135 35a361f6c13ee50d7a1313fbc7535613 523 SUPERFAMILY SSF54862 1 488 2.26E-154 T 13-10-2018 RPIT_02135 35a361f6c13ee50d7a1313fbc7535613 523 Gene3D G3DSA:3.30.70.20 1 302 3.1E-93 T 13-10-2018 RPIT_02135 35a361f6c13ee50d7a1313fbc7535613 523 Gene3D G3DSA:1.10.3650.10 361 440 1.7E-24 T 13-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 RPIT_01265 156afdac9bcb679ddb69831e5e770313 267 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 12 238 1.4E-34 T 13-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA RPIT_01265 156afdac9bcb679ddb69831e5e770313 267 Pfam PF13242 HAD-hyrolase-like 189 263 1.0E-19 T 13-10-2018 RPIT_01265 156afdac9bcb679ddb69831e5e770313 267 Pfam PF13344 Haloacid dehalogenase-like hydrolase 11 110 1.6E-22 T 13-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA RPIT_01265 156afdac9bcb679ddb69831e5e770313 267 PIRSF PIRSF000915 5 267 5.3E-56 T 13-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA RPIT_01265 156afdac9bcb679ddb69831e5e770313 267 SUPERFAMILY SSF56784 8 265 4.33E-60 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_01265 156afdac9bcb679ddb69831e5e770313 267 Gene3D G3DSA:3.40.50.1000 88 189 1.7E-70 T 13-10-2018 IPR023214 HAD superfamily RPIT_01265 156afdac9bcb679ddb69831e5e770313 267 Gene3D G3DSA:3.40.50.1000 11 260 1.7E-70 T 13-10-2018 IPR023214 HAD superfamily RPIT_02200 9c1e240543a6e0cd2d3d032fa15eaa66 494 SUPERFAMILY SSF52540 61 444 8.88E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_08070 d466533228c95b5b919b285debcdb146 302 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 88 3.1E-17 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RPIT_08070 d466533228c95b5b919b285debcdb146 302 Gene3D G3DSA:1.10.150.130 1 107 2.5E-20 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal RPIT_08070 d466533228c95b5b919b285debcdb146 302 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 8 301 3.5E-105 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RPIT_08070 d466533228c95b5b919b285debcdb146 302 Gene3D G3DSA:1.10.443.10 109 295 7.8E-61 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 RPIT_08070 d466533228c95b5b919b285debcdb146 302 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 2 301 53.747 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RPIT_08070 d466533228c95b5b919b285debcdb146 302 Pfam PF00589 Phage integrase family 110 285 1.6E-44 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIT_08070 d466533228c95b5b919b285debcdb146 302 SUPERFAMILY SSF56349 3 293 5.0E-55 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIT_08070 d466533228c95b5b919b285debcdb146 302 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 4 301 55.497 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD RPIT_02805 80eb2cd09de64f9e29b51e379c7f60e4 141 Pfam PF13452 N-terminal half of MaoC dehydratase 7 127 4.0E-20 T 13-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 RPIT_02805 80eb2cd09de64f9e29b51e379c7f60e4 141 Gene3D G3DSA:3.10.129.10 2 140 2.2E-34 T 13-10-2018 RPIT_02805 80eb2cd09de64f9e29b51e379c7f60e4 141 PIRSF PIRSF018072 1 140 2.4E-35 T 13-10-2018 IPR016709 Uncharacterised protein family UPF0336 RPIT_02805 80eb2cd09de64f9e29b51e379c7f60e4 141 SUPERFAMILY SSF54637 8 135 5.95E-28 T 13-10-2018 IPR029069 HotDog domain superfamily RPIT_06885 d5cedb62132194eac883e820074f709a 424 Pfam PF05193 Peptidase M16 inactive domain 177 353 1.1E-21 T 13-10-2018 IPR007863 Peptidase M16, C-terminal RPIT_06885 d5cedb62132194eac883e820074f709a 424 SUPERFAMILY SSF63411 241 417 6.17E-27 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RPIT_06885 d5cedb62132194eac883e820074f709a 424 Pfam PF00675 Insulinase (Peptidase family M16) 21 152 1.9E-24 T 13-10-2018 IPR011765 Peptidase M16, N-terminal RPIT_06885 d5cedb62132194eac883e820074f709a 424 Gene3D G3DSA:3.30.830.10 234 416 3.3E-34 T 13-10-2018 RPIT_06885 d5cedb62132194eac883e820074f709a 424 SUPERFAMILY SSF63411 11 215 1.01E-52 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RPIT_06885 d5cedb62132194eac883e820074f709a 424 Gene3D G3DSA:3.30.830.10 6 228 1.4E-69 T 13-10-2018 RPIT_14700 0eb2f54c4104f4f452c558784982bdfb 389 Pfam PF01594 AI-2E family transporter 58 380 2.3E-44 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like RPIT_10530 89a5fc8eab571350359656261de298a5 187 Pfam PF14030 Protein of unknown function (DUF4245) 8 180 5.1E-35 T 13-10-2018 IPR025339 Protein of unknown function DUF4245 RPIT_02260 49fed8ea1fe79debdb5e10d54ac82f46 297 Pfam PF13276 HTH-like domain 50 102 8.7E-8 T 13-10-2018 IPR025948 HTH-like domain RPIT_02260 49fed8ea1fe79debdb5e10d54ac82f46 297 Pfam PF00665 Integrase core domain 130 242 1.0E-26 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 RPIT_02260 49fed8ea1fe79debdb5e10d54ac82f46 297 SUPERFAMILY SSF53098 122 285 4.55E-36 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily RPIT_02260 49fed8ea1fe79debdb5e10d54ac82f46 297 Gene3D G3DSA:3.30.420.10 132 294 3.5E-13 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 RPIT_04365 7a6e161da49658620d89fb100bd41897 147 SUPERFAMILY SSF82649 1 138 5.23E-44 T 13-10-2018 RPIT_04365 7a6e161da49658620d89fb100bd41897 147 Gene3D G3DSA:3.90.1010.10 1 145 4.6E-46 T 13-10-2018 RPIT_04365 7a6e161da49658620d89fb100bd41897 147 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 4 138 7.7E-49 T 13-10-2018 RPIT_04365 7a6e161da49658620d89fb100bd41897 147 Pfam PF01592 NifU-like N terminal domain 7 127 5.0E-21 T 13-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 RPIT_08770 2b8e62563add1b44b44e63f087438b89 132 Pfam PF14017 Protein of unknown function (DUF4233) 27 128 1.3E-20 T 13-10-2018 IPR025327 Protein of unknown function DUF4233 RPIT_14490 c2dd63525b38c517307efa01bb4830df 125 Pfam PF00581 Rhodanese-like domain 22 111 5.2E-12 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_14490 c2dd63525b38c517307efa01bb4830df 125 Gene3D G3DSA:3.40.250.10 8 117 1.4E-21 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_14490 c2dd63525b38c517307efa01bb4830df 125 SMART SM00450 14 115 1.7E-15 T 13-10-2018 IPR001763 Rhodanese-like domain RPIT_14490 c2dd63525b38c517307efa01bb4830df 125 SUPERFAMILY SSF52821 14 120 3.93E-22 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily RPIT_14685 e46077c2f788050fdc188635110cf199 562 Gene3D G3DSA:3.40.50.1820 294 549 6.1E-59 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_14685 e46077c2f788050fdc188635110cf199 562 SUPERFAMILY SSF82171 49 283 4.84E-27 T 13-10-2018 RPIT_14685 e46077c2f788050fdc188635110cf199 562 Pfam PF00326 Prolyl oligopeptidase family 342 545 2.3E-40 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RPIT_14685 e46077c2f788050fdc188635110cf199 562 Gene3D G3DSA:2.130.10.10 179 288 7.8E-10 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 RPIT_14685 e46077c2f788050fdc188635110cf199 562 SUPERFAMILY SSF53474 297 545 7.9E-56 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_05310 0cb7200368889c804535f27b792af467 159 Pfam PF01668 SmpB protein 10 151 1.5E-56 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 RPIT_05310 0cb7200368889c804535f27b792af467 159 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 10 134 8.0E-49 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 RPIT_05310 0cb7200368889c804535f27b792af467 159 Gene3D G3DSA:2.40.280.10 3 130 4.3E-47 T 13-10-2018 IPR023620 Small protein B RPIT_05310 0cb7200368889c804535f27b792af467 159 Hamap MF_00023 SsrA-binding protein [smpB]. 1 157 69.958 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 RPIT_05310 0cb7200368889c804535f27b792af467 159 SUPERFAMILY SSF74982 4 134 4.32E-48 T 13-10-2018 IPR023620 Small protein B RPIT_05310 0cb7200368889c804535f27b792af467 159 TIGRFAM TIGR00086 smpB: SsrA-binding protein 10 151 3.7E-52 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 RPIT_04310 2f6c9e9b542daf81f000959cbcfdd3ae 189 Pfam PF04978 Protein of unknown function (DUF664) 7 156 2.7E-43 T 13-10-2018 IPR007061 Protein of unknown function DUF664 RPIT_04310 2f6c9e9b542daf81f000959cbcfdd3ae 189 Gene3D G3DSA:1.20.120.450 3 156 3.6E-32 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes RPIT_04310 2f6c9e9b542daf81f000959cbcfdd3ae 189 SUPERFAMILY SSF109854 1 155 4.12E-38 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes RPIT_11695 f34ce35755fb54b94b80ee47e7fc9307 596 SUPERFAMILY SSF51182 227 561 2.89E-64 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily RPIT_11695 f34ce35755fb54b94b80ee47e7fc9307 596 Gene3D G3DSA:2.60.120.10 224 467 5.4E-65 T 13-10-2018 IPR014710 RmlC-like jelly roll fold RPIT_11000 5c0c6f2e1d342f3e001926f5a6f8cd57 472 Pfam PF00860 Permease family 27 414 2.7E-74 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 RPIT_14270 f2e2132f1304849440d990122a7bd0b6 582 SUPERFAMILY SSF52058 216 556 1.36E-44 T 13-10-2018 RPIT_14270 f2e2132f1304849440d990122a7bd0b6 582 Gene3D G3DSA:3.80.10.10 189 523 1.1E-56 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily RPIT_14850 0f5ab14bbd1f2acbee3f5a5414ad0773 274 Gene3D G3DSA:1.10.3720.10 1 265 5.8E-52 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_14850 0f5ab14bbd1f2acbee3f5a5414ad0773 274 SUPERFAMILY SSF161098 3 274 1.68E-57 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_14850 0f5ab14bbd1f2acbee3f5a5414ad0773 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 264 1.2E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_12880 301db207982f89abdcb0cd17312bfdf5 474 SUPERFAMILY SSF159941 59 240 9.94E-54 T 13-10-2018 IPR024047 MM3350-like superfamily RPIT_12880 301db207982f89abdcb0cd17312bfdf5 474 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 60 237 2.2E-55 T 13-10-2018 IPR012912 Plasmid pRiA4b, Orf3 RPIT_12880 301db207982f89abdcb0cd17312bfdf5 474 Gene3D G3DSA:3.10.290.30 55 240 6.7E-57 T 13-10-2018 IPR024047 MM3350-like superfamily RPIT_13180 397859ebed0722c104902f7e16a4ce1a 237 SUPERFAMILY SSF53335 5 234 3.28E-34 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_13180 397859ebed0722c104902f7e16a4ce1a 237 Gene3D G3DSA:3.40.50.150 12 230 4.9E-34 T 13-10-2018 RPIT_13180 397859ebed0722c104902f7e16a4ce1a 237 Pfam PF01209 ubiE/COQ5 methyltransferase family 6 218 4.3E-23 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 RPIT_13725 2bcd3c5b8d37dc1a3045af1518e61100 79 Pfam PF04023 FeoA domain 7 78 1.2E-16 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 RPIT_13725 2bcd3c5b8d37dc1a3045af1518e61100 79 SUPERFAMILY SSF50037 11 78 1.51E-18 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal RPIT_13725 2bcd3c5b8d37dc1a3045af1518e61100 79 Gene3D G3DSA:2.30.30.90 4 79 2.7E-24 T 13-10-2018 IPR038157 Ferrous iron transporter, core domain RPIT_13725 2bcd3c5b8d37dc1a3045af1518e61100 79 SMART SM00899 7 79 3.7E-17 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 RPIT_14860 57c4659a6e09f30057cd92431ca3ad2f 178 Pfam PF04073 Aminoacyl-tRNA editing domain 42 165 2.0E-18 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIT_14860 57c4659a6e09f30057cd92431ca3ad2f 178 SUPERFAMILY SSF55826 38 173 1.57E-24 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 RPIT_14860 57c4659a6e09f30057cd92431ca3ad2f 178 Gene3D G3DSA:3.90.960.10 25 174 3.7E-25 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 RPIT_07290 3b023a8fc38d76ef84c82687c90f4a78 266 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 3 236 2.6E-43 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 RPIT_06265 9e14ce67d31cc12101d59894b5bb0e47 177 Pfam PF02559 CarD-like/TRCF domain 3 110 4.2E-8 T 13-10-2018 IPR003711 CarD-like/TRCF domain RPIT_06265 9e14ce67d31cc12101d59894b5bb0e47 177 Gene3D G3DSA:1.20.58.1290 62 161 5.5E-21 T 13-10-2018 RPIT_06265 9e14ce67d31cc12101d59894b5bb0e47 177 Gene3D G3DSA:2.30.30.840 1 60 6.8E-17 T 13-10-2018 RPIT_06265 9e14ce67d31cc12101d59894b5bb0e47 177 SUPERFAMILY SSF141259 2 65 3.14E-10 T 13-10-2018 IPR036101 CarD-like/TRCF domain superfamily RPIT_06265 9e14ce67d31cc12101d59894b5bb0e47 177 SMART SM01058 2 112 3.3E-8 T 13-10-2018 IPR003711 CarD-like/TRCF domain RPIT_05020 9eee21b8c1fb46a5f7ae2cd40a50b481 434 Pfam PF13416 Bacterial extracellular solute-binding protein 76 370 1.2E-43 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein RPIT_05020 9eee21b8c1fb46a5f7ae2cd40a50b481 434 SUPERFAMILY SSF53850 57 430 3.67E-65 T 13-10-2018 RPIT_05020 9eee21b8c1fb46a5f7ae2cd40a50b481 434 Gene3D G3DSA:3.40.190.10 53 434 4.4E-68 T 13-10-2018 RPIT_06810 c321518f7de4522e0b0641cedebb813c 204 Pfam PF07681 DoxX 6 97 8.6E-8 T 13-10-2018 IPR032808 DoxX family RPIT_01900 d39b9a81723719cb97c7026b4a5db5ff 450 Pfam PF01547 Bacterial extracellular solute-binding protein 67 341 4.6E-17 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein RPIT_01900 d39b9a81723719cb97c7026b4a5db5ff 450 Gene3D G3DSA:3.40.190.10 45 447 1.1E-45 T 13-10-2018 RPIT_01900 d39b9a81723719cb97c7026b4a5db5ff 450 SUPERFAMILY SSF53850 49 443 2.94E-40 T 13-10-2018 RPIT_02975 a465aa5d3e5c62ad7d2a571190b8d0df 142 SUPERFAMILY SSF88723 2 137 1.5E-14 T 13-10-2018 IPR029060 PIN-like domain superfamily RPIT_02975 a465aa5d3e5c62ad7d2a571190b8d0df 142 Gene3D G3DSA:3.40.50.1010 2 139 5.1E-7 T 13-10-2018 RPIT_02975 a465aa5d3e5c62ad7d2a571190b8d0df 142 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 139 10.345 T 13-10-2018 IPR022907 VapC family GO:0004540 RPIT_07325 7ab25eab484fda9ee3a5b9f5f27853ff 96 Gene3D G3DSA:1.10.10.60 9 93 1.2E-13 T 13-10-2018 RPIT_07325 7ab25eab484fda9ee3a5b9f5f27853ff 96 Pfam PF01527 Transposase 5 82 1.0E-15 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RPIT_07325 7ab25eab484fda9ee3a5b9f5f27853ff 96 SUPERFAMILY SSF46689 5 93 5.02E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_03345 a24d9c169b1579919677222a9c8c3954 73 Gene3D G3DSA:2.40.50.140 1 73 5.6E-36 T 13-10-2018 RPIT_03345 a24d9c169b1579919677222a9c8c3954 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 4 72 5.3E-36 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RPIT_03345 a24d9c169b1579919677222a9c8c3954 73 Pfam PF01176 Translation initiation factor 1A / IF-1 9 71 3.5E-27 T 13-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 RPIT_03345 a24d9c169b1579919677222a9c8c3954 73 SUPERFAMILY SSF50249 4 72 9.43E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_03345 a24d9c169b1579919677222a9c8c3954 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 2 73 25.857 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RPIT_04250 e958f799772a2712f712574d8d6503ea 98 PRINTS PR01651 Protein-export SecG membrane protein signature 23 43 1.2E-5 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RPIT_04250 e958f799772a2712f712574d8d6503ea 98 PRINTS PR01651 Protein-export SecG membrane protein signature 74 96 1.2E-5 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RPIT_04250 e958f799772a2712f712574d8d6503ea 98 PRINTS PR01651 Protein-export SecG membrane protein signature 43 57 1.2E-5 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RPIT_04250 e958f799772a2712f712574d8d6503ea 98 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 23 93 3.3E-19 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RPIT_04250 e958f799772a2712f712574d8d6503ea 98 Pfam PF03840 Preprotein translocase SecG subunit 25 92 5.5E-17 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RPIT_04115 a08f810410aef15fcccef0438ea16313 165 Gene3D G3DSA:2.40.260.10 5 164 1.3E-7 T 13-10-2018 IPR023365 Sortase domain superfamily RPIT_06815 da0a3b91da6d8109e9eb143710ba10ca 416 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 12 414 1.1E-112 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RPIT_06815 da0a3b91da6d8109e9eb143710ba10ca 416 ProSitePatterns PS00885 EPSP synthase signature 2. 328 346 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RPIT_06815 da0a3b91da6d8109e9eb143710ba10ca 416 PIRSF PIRSF000505 1 416 1.8E-120 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RPIT_06815 da0a3b91da6d8109e9eb143710ba10ca 416 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 409 1.8E-108 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 RPIT_06815 da0a3b91da6d8109e9eb143710ba10ca 416 Gene3D G3DSA:3.65.10.10 12 406 6.4E-136 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 RPIT_06815 da0a3b91da6d8109e9eb143710ba10ca 416 SUPERFAMILY SSF55205 7 413 7.46E-107 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RPIT_06815 da0a3b91da6d8109e9eb143710ba10ca 416 ProSitePatterns PS00104 EPSP synthase signature 1. 83 97 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RPIT_06815 da0a3b91da6d8109e9eb143710ba10ca 416 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 8 416 29.334 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RPIT_06815 da0a3b91da6d8109e9eb143710ba10ca 416 Gene3D G3DSA:3.65.10.10 20 233 6.4E-136 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 RPIT_01760 a7a689b75c2597903727ae28826a471c 359 Gene3D G3DSA:1.10.3720.10 131 354 3.7E-32 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_01760 a7a689b75c2597903727ae28826a471c 359 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 151 351 4.1E-23 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_01760 a7a689b75c2597903727ae28826a471c 359 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 83 353 2.2E-86 T 13-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 RPIT_01760 a7a689b75c2597903727ae28826a471c 359 SUPERFAMILY SSF161098 89 345 6.54E-40 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_04690 6423b0a9bdc77543281d3b0c1af22698 413 Pfam PF00171 Aldehyde dehydrogenase family 9 282 4.0E-14 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 RPIT_04690 6423b0a9bdc77543281d3b0c1af22698 413 PIRSF PIRSF000151 1 413 1.3E-168 T 13-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 RPIT_04690 6423b0a9bdc77543281d3b0c1af22698 413 Gene3D G3DSA:3.40.605.10 15 407 1.7E-157 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 RPIT_04690 6423b0a9bdc77543281d3b0c1af22698 413 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 412 40.976 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RPIT_04690 6423b0a9bdc77543281d3b0c1af22698 413 SUPERFAMILY SSF53720 5 412 9.82E-111 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 RPIT_04690 6423b0a9bdc77543281d3b0c1af22698 413 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 319 340 - T 13-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RPIT_04690 6423b0a9bdc77543281d3b0c1af22698 413 Gene3D G3DSA:3.40.309.10 222 370 1.7E-157 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 RPIT_04690 6423b0a9bdc77543281d3b0c1af22698 413 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 402 5.0E-145 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RPIT_12175 005e4528780fce0f2ed5e8a94ca46df9 621 SUPERFAMILY SSF90123 33 353 5.62E-75 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_12175 005e4528780fce0f2ed5e8a94ca46df9 621 SMART SM00382 408 594 5.4E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_12175 005e4528780fce0f2ed5e8a94ca46df9 621 Pfam PF00005 ABC transporter 399 548 1.5E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_12175 005e4528780fce0f2ed5e8a94ca46df9 621 Pfam PF00664 ABC transporter transmembrane region 46 319 2.4E-42 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 RPIT_12175 005e4528780fce0f2ed5e8a94ca46df9 621 ProSitePatterns PS00211 ABC transporters family signature. 520 534 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_12175 005e4528780fce0f2ed5e8a94ca46df9 621 Gene3D G3DSA:3.40.50.300 359 621 2.6E-86 T 13-10-2018 RPIT_12175 005e4528780fce0f2ed5e8a94ca46df9 621 SUPERFAMILY SSF52540 363 619 2.66E-82 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_12175 005e4528780fce0f2ed5e8a94ca46df9 621 Gene3D G3DSA:1.20.1560.10 17 349 6.9E-81 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 RPIT_13230 d864d1c92aac0b8ce5398abd6792e2cd 124 Pfam PF00893 Small Multidrug Resistance protein 6 95 1.2E-17 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 RPIT_13230 d864d1c92aac0b8ce5398abd6792e2cd 124 SUPERFAMILY SSF103481 10 107 3.92E-13 T 13-10-2018 RPIT_13230 d864d1c92aac0b8ce5398abd6792e2cd 124 Gene3D G3DSA:1.10.3730.20 5 112 1.6E-23 T 13-10-2018 RPIT_11730 438e40460a1efc488b78f00b990b6e4a 230 Gene3D G3DSA:1.10.3720.10 23 215 1.1E-20 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_11730 438e40460a1efc488b78f00b990b6e4a 230 SUPERFAMILY SSF161098 22 205 1.83E-27 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_11730 438e40460a1efc488b78f00b990b6e4a 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 216 5.4E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_08415 20c97183c99cdbc4eae875fafaa7b53c 130 SUPERFAMILY SSF49265 17 123 3.95E-5 T 13-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 RPIT_08415 20c97183c99cdbc4eae875fafaa7b53c 130 Gene3D G3DSA:2.60.40.10 20 128 1.2E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_08720 35f666f2734efe3d3cb578c05eb85230 255 SMART SM00421 175 232 1.7E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_08720 35f666f2734efe3d3cb578c05eb85230 255 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 192 1.8E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_08720 35f666f2734efe3d3cb578c05eb85230 255 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 208 220 1.8E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_08720 35f666f2734efe3d3cb578c05eb85230 255 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 208 1.8E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_08720 35f666f2734efe3d3cb578c05eb85230 255 ProSitePatterns PS00622 LuxR-type HTH domain signature. 192 219 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_08720 35f666f2734efe3d3cb578c05eb85230 255 Pfam PF00196 Bacterial regulatory proteins, luxR family 178 230 3.3E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIT_08720 35f666f2734efe3d3cb578c05eb85230 255 Gene3D G3DSA:1.10.10.10 136 248 8.2E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_08720 35f666f2734efe3d3cb578c05eb85230 255 SUPERFAMILY SSF46894 167 238 6.8E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIT_12530 77b58f5a2623818e57dd98b9a6795391 125 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 115 2.9E-26 T 13-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV RPIT_13320 c0f9c52907102d615980bfc379525e63 161 Pfam PF12724 Flavodoxin domain 5 144 1.2E-20 T 13-10-2018 IPR026816 Flavodoxin domain RPIT_13320 c0f9c52907102d615980bfc379525e63 161 Gene3D G3DSA:3.40.50.360 4 115 7.4E-13 T 13-10-2018 IPR029039 Flavoprotein-like superfamily RPIT_13320 c0f9c52907102d615980bfc379525e63 161 SUPERFAMILY SSF52218 1 158 7.99E-17 T 13-10-2018 IPR029039 Flavoprotein-like superfamily RPIT_07090 c87fc9f88ab239be6e524a3b52cef702 64 Pfam PF11248 Protein of unknown function (DUF3046) 1 61 1.6E-20 T 13-10-2018 IPR021408 Protein of unknown function DUF3046 RPIT_09180 037e16532f763a4731094bc8983d7dfc 194 Gene3D G3DSA:3.40.630.30 3 193 6.4E-41 T 13-10-2018 RPIT_09180 037e16532f763a4731094bc8983d7dfc 194 Pfam PF13302 Acetyltransferase (GNAT) domain 15 151 4.6E-10 T 13-10-2018 IPR000182 GNAT domain RPIT_09180 037e16532f763a4731094bc8983d7dfc 194 SUPERFAMILY SSF55729 7 176 2.44E-30 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_11775 98de213cd2034c51c7c8d71f803c797d 434 TIGRFAM TIGR00797 matE: MATE efflux family protein 13 389 1.3E-83 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RPIT_11775 98de213cd2034c51c7c8d71f803c797d 434 PIRSF PIRSF006603 1 430 9.0E-58 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RPIT_11775 98de213cd2034c51c7c8d71f803c797d 434 Pfam PF01554 MatE 242 388 1.9E-18 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RPIT_11775 98de213cd2034c51c7c8d71f803c797d 434 Pfam PF01554 MatE 13 172 1.0E-28 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RPIT_00665 82b63a237c13195946d4133103fe8255 162 Pfam PF03703 Bacterial PH domain 74 151 1.3E-13 T 13-10-2018 IPR005182 Domain of unknown function DUF304 RPIT_08725 eb59609072309c4fb3595955f6c9140a 61 Gene3D G3DSA:2.30.170.40 20 61 1.3E-17 T 13-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08725 eb59609072309c4fb3595955f6c9140a 61 SUPERFAMILY SSF143800 2 59 4.12E-21 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_08725 eb59609072309c4fb3595955f6c9140a 61 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 61 14.31 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_08725 eb59609072309c4fb3595955f6c9140a 61 TIGRFAM TIGR00009 L28: ribosomal protein bL28 2 56 1.6E-19 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_08725 eb59609072309c4fb3595955f6c9140a 61 Pfam PF00830 Ribosomal L28 family 4 58 1.7E-21 T 13-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_11605 907c48b2144895d0eaad8a2ca63b8f93 518 PRINTS PR01806 Virulence factor MviN signature 414 431 8.8E-10 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIT_11605 907c48b2144895d0eaad8a2ca63b8f93 518 PRINTS PR01806 Virulence factor MviN signature 162 183 8.8E-10 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIT_11605 907c48b2144895d0eaad8a2ca63b8f93 518 PRINTS PR01806 Virulence factor MviN signature 40 59 8.8E-10 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIT_11605 907c48b2144895d0eaad8a2ca63b8f93 518 PRINTS PR01806 Virulence factor MviN signature 262 288 8.8E-10 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIT_11605 907c48b2144895d0eaad8a2ca63b8f93 518 PRINTS PR01806 Virulence factor MviN signature 358 377 8.8E-10 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIT_11605 907c48b2144895d0eaad8a2ca63b8f93 518 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 9 500 4.2E-87 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIT_11605 907c48b2144895d0eaad8a2ca63b8f93 518 Pfam PF03023 MviN-like protein 35 469 4.9E-78 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIT_11605 907c48b2144895d0eaad8a2ca63b8f93 518 PIRSF PIRSF002869 5 508 3.2E-93 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIT_01315 9313ad8bcdc3f1595919432e1fb9b79e 661 Pfam PF07532 Bacterial Ig-like domain (group 4) 470 525 6.9E-15 T 13-10-2018 IPR011081 Bacterial Ig-related RPIT_01315 9313ad8bcdc3f1595919432e1fb9b79e 661 Gene3D G3DSA:2.115.10.20 168 462 5.6E-23 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RPIT_01315 9313ad8bcdc3f1595919432e1fb9b79e 661 Gene3D G3DSA:2.60.40.1080 540 626 3.3E-24 T 13-10-2018 RPIT_01315 9313ad8bcdc3f1595919432e1fb9b79e 661 SMART SM00635 544 621 5.2E-19 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 RPIT_01315 9313ad8bcdc3f1595919432e1fb9b79e 661 SUPERFAMILY SSF75005 189 466 1.16E-24 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RPIT_01315 9313ad8bcdc3f1595919432e1fb9b79e 661 SUPERFAMILY SSF49373 542 624 4.45E-17 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments RPIT_01315 9313ad8bcdc3f1595919432e1fb9b79e 661 Pfam PF02368 Bacterial Ig-like domain (group 2) 545 622 2.9E-18 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 RPIT_03785 c0e264aabf7f0cd10f5a053121ebd4ec 382 SUPERFAMILY SSF55874 268 373 2.62E-9 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_03785 c0e264aabf7f0cd10f5a053121ebd4ec 382 Gene3D G3DSA:3.30.565.10 245 373 4.9E-14 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_00780 2051ec4ffc3fafac87fe1a1f2c752aac 331 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 258 264 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RPIT_00780 2051ec4ffc3fafac87fe1a1f2c752aac 331 Pfam PF05175 Methyltransferase small domain 157 323 2.5E-39 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 RPIT_00780 2051ec4ffc3fafac87fe1a1f2c752aac 331 Gene3D G3DSA:3.40.50.150 149 330 7.5E-41 T 13-10-2018 RPIT_00780 2051ec4ffc3fafac87fe1a1f2c752aac 331 Gene3D G3DSA:3.40.50.150 4 136 1.5E-21 T 13-10-2018 RPIT_00780 2051ec4ffc3fafac87fe1a1f2c752aac 331 SUPERFAMILY SSF53335 154 304 6.72E-28 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_10400 b0c464cbfa33eba83922e4ace81b9f3e 176 SUPERFAMILY SSF55729 1 162 1.34E-24 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_10400 b0c464cbfa33eba83922e4ace81b9f3e 176 Pfam PF00583 Acetyltransferase (GNAT) family 37 151 2.0E-13 T 13-10-2018 IPR000182 GNAT domain RPIT_10400 b0c464cbfa33eba83922e4ace81b9f3e 176 Gene3D G3DSA:3.40.630.30 1 166 4.0E-30 T 13-10-2018 RPIT_08035 da43815088ebccc8d25888e87e760bbc 198 Gene3D G3DSA:1.10.10.10 1 79 7.1E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_08035 da43815088ebccc8d25888e87e760bbc 198 Gene3D G3DSA:1.10.10.10 80 172 1.9E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_08035 da43815088ebccc8d25888e87e760bbc 198 SUPERFAMILY SSF46785 81 154 1.43E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_08035 da43815088ebccc8d25888e87e760bbc 198 SUPERFAMILY SSF46785 2 75 2.0E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_08035 da43815088ebccc8d25888e87e760bbc 198 PIRSF PIRSF019345 1 198 1.3E-49 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RPIT_08035 da43815088ebccc8d25888e87e760bbc 198 Pfam PF04079 Segregation and condensation complex subunit ScpB 5 163 1.0E-47 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RPIT_07800 ea9d57e5096aa7bd69c4f3c7ba084e02 216 SUPERFAMILY SSF52540 2 157 1.06E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_07800 ea9d57e5096aa7bd69c4f3c7ba084e02 216 Pfam PF00176 SNF2 family N-terminal domain 15 145 8.1E-8 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 RPIT_07800 ea9d57e5096aa7bd69c4f3c7ba084e02 216 Gene3D G3DSA:3.40.50.10810 1 207 1.4E-40 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily RPIT_12985 b8d51523e2ddc290238ea77ba89d8fd7 205 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 80 200 6.3E-23 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I RPIT_12985 b8d51523e2ddc290238ea77ba89d8fd7 205 Pfam PF12085 Protein of unknown function (DUF3562) 28 66 2.8E-6 T 13-10-2018 IPR021945 Protein of unknown function DUF3562 RPIT_12985 b8d51523e2ddc290238ea77ba89d8fd7 205 Gene3D G3DSA:3.40.50.2300 75 205 5.7E-47 T 13-10-2018 RPIT_12985 b8d51523e2ddc290238ea77ba89d8fd7 205 Gene3D G3DSA:1.10.8.1060 2 74 2.5E-13 T 13-10-2018 RPIT_12985 b8d51523e2ddc290238ea77ba89d8fd7 205 SMART SM00226 77 202 1.1E-39 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I RPIT_12985 b8d51523e2ddc290238ea77ba89d8fd7 205 SUPERFAMILY SSF52788 77 200 4.71E-33 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily RPIT_09500 57623b7f32f0470caa59486bef42a121 241 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 6 240 1.3E-111 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 RPIT_09500 57623b7f32f0470caa59486bef42a121 241 Gene3D G3DSA:3.30.230.70 14 241 2.5E-56 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RPIT_09500 57623b7f32f0470caa59486bef42a121 241 SUPERFAMILY SSF55666 156 240 1.19E-25 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RPIT_09500 57623b7f32f0470caa59486bef42a121 241 Pfam PF03725 3' exoribonuclease family, domain 2 162 227 4.2E-11 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RPIT_09500 57623b7f32f0470caa59486bef42a121 241 SUPERFAMILY SSF54211 5 185 4.76E-45 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RPIT_09500 57623b7f32f0470caa59486bef42a121 241 Pfam PF01138 3' exoribonuclease family, domain 1 14 144 1.1E-21 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RPIT_09500 57623b7f32f0470caa59486bef42a121 241 Hamap MF_00564 Ribonuclease PH [rph]. 15 241 42.099 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 RPIT_09500 57623b7f32f0470caa59486bef42a121 241 ProSitePatterns PS01277 Ribonuclease PH signature. 120 133 - T 13-10-2018 IPR018336 Ribonuclease PH, conserved site RPIT_12430 d6e0c38179ae803adf1bfe2b763d85f7 423 SUPERFAMILY SSF103473 16 413 4.58E-34 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_12430 d6e0c38179ae803adf1bfe2b763d85f7 423 Pfam PF05977 Transmembrane secretion effector 9 406 1.2E-30 T 13-10-2018 IPR010290 Transmembrane secretion effector RPIT_12430 d6e0c38179ae803adf1bfe2b763d85f7 423 Gene3D G3DSA:1.20.1250.20 12 408 1.3E-30 T 13-10-2018 RPIT_03165 a09be95f821a3c3b064e016751b3248d 180 Gene3D G3DSA:3.90.930.12 84 180 1.5E-38 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03165 a09be95f821a3c3b064e016751b3248d 180 SUPERFAMILY SSF56053 84 178 1.35E-33 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03165 a09be95f821a3c3b064e016751b3248d 180 PRINTS PR00059 Ribosomal protein L6 signature 72 97 7.6E-31 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIT_03165 a09be95f821a3c3b064e016751b3248d 180 PRINTS PR00059 Ribosomal protein L6 signature 101 117 7.6E-31 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIT_03165 a09be95f821a3c3b064e016751b3248d 180 PRINTS PR00059 Ribosomal protein L6 signature 143 164 7.6E-31 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIT_03165 a09be95f821a3c3b064e016751b3248d 180 SUPERFAMILY SSF56053 1 83 1.68E-25 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03165 a09be95f821a3c3b064e016751b3248d 180 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 178 5.6E-72 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIT_03165 a09be95f821a3c3b064e016751b3248d 180 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 156 164 - T 13-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIT_03165 a09be95f821a3c3b064e016751b3248d 180 Pfam PF00347 Ribosomal protein L6 91 166 2.2E-18 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03165 a09be95f821a3c3b064e016751b3248d 180 Pfam PF00347 Ribosomal protein L6 11 83 3.6E-18 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03165 a09be95f821a3c3b064e016751b3248d 180 Gene3D G3DSA:3.90.930.12 1 83 4.0E-30 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03165 a09be95f821a3c3b064e016751b3248d 180 PIRSF PIRSF002162 1 179 1.0E-47 T 13-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_03165 a09be95f821a3c3b064e016751b3248d 180 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 178 38.424 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIT_09565 2c6c8c0c1099ea29f1b82c78758e966c 337 Pfam PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain 190 330 1.8E-6 T 13-10-2018 IPR019490 Bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase, C-terminal GO:0004347|GO:0004476|GO:0005975 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00051+5.3.1.8|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.8+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 RPIT_09565 2c6c8c0c1099ea29f1b82c78758e966c 337 SUPERFAMILY SSF53697 55 331 1.61E-33 T 13-10-2018 RPIT_13270 4c2494bed559c6ccf3ff297862fa0e79 314 Pfam PF13407 Periplasmic binding protein domain 43 294 1.4E-37 T 13-10-2018 IPR025997 Periplasmic binding protein RPIT_13270 4c2494bed559c6ccf3ff297862fa0e79 314 Gene3D G3DSA:3.40.50.2300 141 314 1.8E-38 T 13-10-2018 RPIT_13270 4c2494bed559c6ccf3ff297862fa0e79 314 Gene3D G3DSA:3.40.50.2300 36 130 1.8E-14 T 13-10-2018 RPIT_13270 4c2494bed559c6ccf3ff297862fa0e79 314 SUPERFAMILY SSF53822 41 314 2.51E-51 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_13840 f1b0347988f785dc253e9ddd9bea4997 703 Pfam PF00535 Glycosyl transferase family 2 24 190 3.6E-30 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RPIT_13840 f1b0347988f785dc253e9ddd9bea4997 703 Pfam PF00535 Glycosyl transferase family 2 360 473 1.7E-20 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RPIT_13840 f1b0347988f785dc253e9ddd9bea4997 703 Gene3D G3DSA:3.90.550.10 326 615 3.1E-32 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_13840 f1b0347988f785dc253e9ddd9bea4997 703 Gene3D G3DSA:3.90.550.10 4 280 3.6E-51 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_13840 f1b0347988f785dc253e9ddd9bea4997 703 SUPERFAMILY SSF53448 359 589 4.12E-38 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_13840 f1b0347988f785dc253e9ddd9bea4997 703 SUPERFAMILY SSF53448 21 242 1.08E-48 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_02445 43756aac9da341bf936ae34ccce0e890 302 Pfam PF01578 Cytochrome C assembly protein 106 299 5.6E-42 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RPIT_02445 43756aac9da341bf936ae34ccce0e890 302 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 79 302 2.5E-60 T 13-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 RPIT_13025 6adf15e7525b1f548a56c1b84bdf8f55 389 Gene3D G3DSA:2.160.10.10 272 374 1.7E-22 T 13-10-2018 RPIT_13025 6adf15e7525b1f548a56c1b84bdf8f55 389 SUPERFAMILY SSF51161 228 373 6.93E-16 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily RPIT_13025 6adf15e7525b1f548a56c1b84bdf8f55 389 Pfam PF00483 Nucleotidyl transferase 8 258 9.5E-49 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 RPIT_13025 6adf15e7525b1f548a56c1b84bdf8f55 389 SUPERFAMILY SSF53448 5 337 1.6E-65 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_13025 6adf15e7525b1f548a56c1b84bdf8f55 389 Gene3D G3DSA:3.90.550.10 3 271 7.5E-69 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_01485 1f84345eae0ffe0008927567637ea86f 286 Pfam PF04468 PSP1 C-terminal conserved region 64 147 3.9E-15 T 13-10-2018 IPR007557 PSP1, C-terminal RPIT_11890 5aadb2cf80f61372a6b37be5e904f45a 465 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 459 1.3E-194 T 13-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 RPIT_11890 5aadb2cf80f61372a6b37be5e904f45a 465 PIRSF PIRSF000204 1 462 5.2E-199 T 13-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 RPIT_11890 5aadb2cf80f61372a6b37be5e904f45a 465 SUPERFAMILY SSF52467 289 461 1.11E-71 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily RPIT_11890 5aadb2cf80f61372a6b37be5e904f45a 465 Gene3D G3DSA:3.40.50.1220 281 463 1.3E-84 T 13-10-2018 RPIT_12105 8e78c87dd8c7df519f9c79cdebf715a6 485 Gene3D G3DSA:3.90.1380.10 1 94 5.0E-27 T 13-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily RPIT_12105 8e78c87dd8c7df519f9c79cdebf715a6 485 Gene3D G3DSA:3.40.50.1100 115 451 2.0E-126 T 13-10-2018 RPIT_12105 8e78c87dd8c7df519f9c79cdebf715a6 485 Pfam PF14821 Threonine synthase N terminus 2 85 2.9E-26 T 13-10-2018 IPR029144 Threonine synthase, N-terminal RPIT_12105 8e78c87dd8c7df519f9c79cdebf715a6 485 Gene3D G3DSA:3.40.50.1100 104 440 2.0E-126 T 13-10-2018 RPIT_12105 8e78c87dd8c7df519f9c79cdebf715a6 485 TIGRFAM TIGR00260 thrC: threonine synthase 97 433 2.1E-64 T 13-10-2018 IPR004450 Threonine synthase-like RPIT_12105 8e78c87dd8c7df519f9c79cdebf715a6 485 SUPERFAMILY SSF53686 1 471 1.77E-139 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIT_12105 8e78c87dd8c7df519f9c79cdebf715a6 485 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 109 123 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RPIT_12105 8e78c87dd8c7df519f9c79cdebf715a6 485 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 100 335 1.6E-13 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme RPIT_08420 702a3b574aa51679695fae1acf3b98f7 150 SUPERFAMILY SSF54197 11 133 1.26E-36 T 13-10-2018 IPR036265 HIT-like superfamily RPIT_08420 702a3b574aa51679695fae1acf3b98f7 150 Pfam PF01230 HIT domain 22 116 1.6E-22 T 13-10-2018 IPR001310 Histidine triad (HIT) protein RPIT_08420 702a3b574aa51679695fae1acf3b98f7 150 Gene3D G3DSA:3.30.428.10 8 149 6.4E-43 T 13-10-2018 IPR036265 HIT-like superfamily RPIT_08420 702a3b574aa51679695fae1acf3b98f7 150 PRINTS PR00332 Histidine triad family signature 34 52 7.1E-12 T 13-10-2018 IPR001310 Histidine triad (HIT) protein RPIT_08420 702a3b574aa51679695fae1acf3b98f7 150 PRINTS PR00332 Histidine triad family signature 13 29 7.1E-12 T 13-10-2018 IPR001310 Histidine triad (HIT) protein RPIT_08420 702a3b574aa51679695fae1acf3b98f7 150 PRINTS PR00332 Histidine triad family signature 102 112 7.1E-12 T 13-10-2018 IPR001310 Histidine triad (HIT) protein RPIT_02090 827a7cc7d94b8049947a3957749f51c4 524 SUPERFAMILY SSF161098 273 512 8.76E-58 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_02090 827a7cc7d94b8049947a3957749f51c4 524 Gene3D G3DSA:1.20.58.370 17 105 2.7E-8 T 13-10-2018 IPR035277 MalF, N-terminal RPIT_02090 827a7cc7d94b8049947a3957749f51c4 524 Gene3D G3DSA:2.40.430.10 137 224 4.6E-12 T 13-10-2018 RPIT_02090 827a7cc7d94b8049947a3957749f51c4 524 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 308 520 9.8E-20 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_02090 827a7cc7d94b8049947a3957749f51c4 524 Pfam PF16296 N-terminal of TM subunit in PBP-dependent ABC transporters 83 158 4.0E-20 T 13-10-2018 IPR032550 PBP-dependent ABC transporters TM subunit, N-terminal RPIT_02090 827a7cc7d94b8049947a3957749f51c4 524 Gene3D G3DSA:1.10.3720.10 283 521 6.0E-66 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_02090 827a7cc7d94b8049947a3957749f51c4 524 SUPERFAMILY SSF160964 23 271 3.27E-58 T 13-10-2018 RPIT_02090 827a7cc7d94b8049947a3957749f51c4 524 Gene3D G3DSA:3.10.650.10 225 280 4.6E-12 T 13-10-2018 RPIT_14450 117d73396e2878af9a643cabc2534ed4 106 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 35 84 1.6E-8 T 13-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 RPIT_06830 27c9d17a0d95338a8f236e4601790a33 396 SUPERFAMILY SSF51735 97 284 4.33E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_06830 27c9d17a0d95338a8f236e4601790a33 396 SUPERFAMILY SSF55021 325 396 2.08E-15 T 13-10-2018 RPIT_06830 27c9d17a0d95338a8f236e4601790a33 396 Gene3D G3DSA:3.40.50.720 98 286 2.2E-101 T 13-10-2018 RPIT_06830 27c9d17a0d95338a8f236e4601790a33 396 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 143 170 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RPIT_06830 27c9d17a0d95338a8f236e4601790a33 396 Gene3D G3DSA:3.40.50.720 4 301 2.2E-101 T 13-10-2018 RPIT_06830 27c9d17a0d95338a8f236e4601790a33 396 Gene3D G3DSA:3.30.70.260 313 396 4.3E-23 T 13-10-2018 RPIT_06830 27c9d17a0d95338a8f236e4601790a33 396 SUPERFAMILY SSF52283 2 127 2.84E-39 T 13-10-2018 RPIT_06830 27c9d17a0d95338a8f236e4601790a33 396 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 311 1.2E-31 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 RPIT_06830 27c9d17a0d95338a8f236e4601790a33 396 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 283 4.7E-48 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RPIT_13140 c91b110987d138ea82cf946507d2253a 722 Gene3D G3DSA:3.90.920.30 25 302 8.8E-89 T 13-10-2018 RPIT_13140 c91b110987d138ea82cf946507d2253a 722 Pfam PF04679 ATP dependent DNA ligase C terminal region 575 695 4.9E-13 T 13-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 RPIT_13140 c91b110987d138ea82cf946507d2253a 722 Gene3D G3DSA:2.40.50.140 557 703 5.1E-31 T 13-10-2018 RPIT_13140 c91b110987d138ea82cf946507d2253a 722 Pfam PF01068 ATP dependent DNA ligase domain 365 555 3.0E-41 T 13-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 RPIT_13140 c91b110987d138ea82cf946507d2253a 722 SUPERFAMILY SSF50249 558 702 1.71E-11 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_13140 c91b110987d138ea82cf946507d2253a 722 SUPERFAMILY SSF56091 361 555 1.53E-42 T 13-10-2018 RPIT_13140 c91b110987d138ea82cf946507d2253a 722 Gene3D G3DSA:3.30.470.30 362 556 8.5E-44 T 13-10-2018 RPIT_13140 c91b110987d138ea82cf946507d2253a 722 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 18 262 6.1E-68 T 13-10-2018 IPR014145 DNA ligase D, polymerase domain RPIT_11210 fdd3c90fe7715b0c0f159f26fd4c580f 91 Pfam PF11662 Protein of unknown function (DUF3263) 12 85 2.2E-30 T 13-10-2018 IPR021678 Protein of unknown function DUF3263 RPIT_14140 219d9c44aaec39ae059f7c6b9a1ad5e2 465 SUPERFAMILY SSF55961 5 148 2.85E-14 T 13-10-2018 RPIT_14140 219d9c44aaec39ae059f7c6b9a1ad5e2 465 Gene3D G3DSA:3.30.530.20 4 154 2.7E-10 T 13-10-2018 IPR023393 START-like domain superfamily RPIT_14140 219d9c44aaec39ae059f7c6b9a1ad5e2 465 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 160 449 2.1E-83 T 13-10-2018 IPR010099 Epimerase family protein SDR39U1 RPIT_14140 219d9c44aaec39ae059f7c6b9a1ad5e2 465 Pfam PF01370 NAD dependent epimerase/dehydratase family 160 276 3.5E-9 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 RPIT_14140 219d9c44aaec39ae059f7c6b9a1ad5e2 465 Pfam PF08338 Domain of unknown function (DUF1731) 404 451 8.3E-13 T 13-10-2018 IPR013549 Domain of unknown function DUF1731 RPIT_14140 219d9c44aaec39ae059f7c6b9a1ad5e2 465 SUPERFAMILY SSF51735 158 452 1.4E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_14140 219d9c44aaec39ae059f7c6b9a1ad5e2 465 Gene3D G3DSA:3.40.50.720 155 443 6.2E-72 T 13-10-2018 RPIT_06310 42fa7ebbdd3e5361af99a78c5af06b05 513 SUPERFAMILY SSF82866 271 472 5.23E-29 T 13-10-2018 RPIT_06310 42fa7ebbdd3e5361af99a78c5af06b05 513 Gene3D G3DSA:3.30.70.3400 11 95 8.1E-19 T 13-10-2018 RPIT_06310 42fa7ebbdd3e5361af99a78c5af06b05 513 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 479 36.088 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RPIT_06310 42fa7ebbdd3e5361af99a78c5af06b05 513 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 11 465 7.7E-97 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RPIT_06310 42fa7ebbdd3e5361af99a78c5af06b05 513 Pfam PF02355 Protein export membrane protein 293 469 3.7E-10 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RPIT_06310 42fa7ebbdd3e5361af99a78c5af06b05 513 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 219 457 1.5E-52 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RPIT_06310 42fa7ebbdd3e5361af99a78c5af06b05 513 Gene3D G3DSA:3.30.1360.200 145 290 5.3E-24 T 13-10-2018 RPIT_04780 188fc28dc81a3a1502e299e1c6777a45 425 Pfam PF01384 Phosphate transporter family 22 342 3.0E-76 T 13-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 RPIT_12790 6d67107a6002be0470329ed080c28d53 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 353 375 3.8E-8 T 13-10-2018 RPIT_12790 6d67107a6002be0470329ed080c28d53 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 3.8E-8 T 13-10-2018 RPIT_12790 6d67107a6002be0470329ed080c28d53 540 SUPERFAMILY SSF56425 234 350 3.74E-35 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 RPIT_12790 6d67107a6002be0470329ed080c28d53 540 Gene3D G3DSA:3.90.700.10 244 356 4.5E-139 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 RPIT_12790 6d67107a6002be0470329ed080c28d53 540 SUPERFAMILY SSF51905 8 408 8.37E-58 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_12790 6d67107a6002be0470329ed080c28d53 540 Gene3D G3DSA:3.50.50.60 15 401 4.5E-139 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_12790 6d67107a6002be0470329ed080c28d53 540 Gene3D G3DSA:1.20.58.100 415 521 4.4E-13 T 13-10-2018 RPIT_12790 6d67107a6002be0470329ed080c28d53 540 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 14 506 2.1E-149 T 13-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 RPIT_12790 6d67107a6002be0470329ed080c28d53 540 Pfam PF02910 Fumarate reductase flavoprotein C-term 430 536 1.3E-9 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RPIT_12790 6d67107a6002be0470329ed080c28d53 540 SUPERFAMILY SSF46977 430 536 4.06E-21 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RPIT_12790 6d67107a6002be0470329ed080c28d53 540 Pfam PF00890 FAD binding domain 15 390 2.9E-86 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RPIT_03015 faeea935510de1cc7d703628d2e87cbd 582 SMART SM00487 21 200 3.2E-14 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIT_03015 faeea935510de1cc7d703628d2e87cbd 582 Gene3D G3DSA:3.40.50.300 237 394 3.4E-12 T 13-10-2018 RPIT_03015 faeea935510de1cc7d703628d2e87cbd 582 Pfam PF04851 Type III restriction enzyme, res subunit 24 178 3.8E-16 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RPIT_03015 faeea935510de1cc7d703628d2e87cbd 582 Gene3D G3DSA:3.40.50.300 18 189 5.8E-21 T 13-10-2018 RPIT_03015 faeea935510de1cc7d703628d2e87cbd 582 SUPERFAMILY SSF52540 41 390 7.29E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_02815 f5c769d1decfe8350c3ec535d7b9b0eb 347 Gene3D G3DSA:3.90.78.10 231 347 1.3E-37 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_02815 f5c769d1decfe8350c3ec535d7b9b0eb 347 Pfam PF01565 FAD binding domain 22 144 4.5E-21 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIT_02815 f5c769d1decfe8350c3ec535d7b9b0eb 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 214 339 3.1E-37 T 13-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_02815 f5c769d1decfe8350c3ec535d7b9b0eb 347 Gene3D G3DSA:3.30.43.10 3 70 2.2E-21 T 13-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 RPIT_02815 f5c769d1decfe8350c3ec535d7b9b0eb 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 78.715 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_02815 f5c769d1decfe8350c3ec535d7b9b0eb 347 Gene3D G3DSA:3.30.465.10 78 225 6.1E-42 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 RPIT_02815 f5c769d1decfe8350c3ec535d7b9b0eb 347 SUPERFAMILY SSF56194 211 342 1.31E-32 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 RPIT_02815 f5c769d1decfe8350c3ec535d7b9b0eb 347 SUPERFAMILY SSF56176 7 184 3.08E-36 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 RPIT_05950 f0174e6b574d48e4093e74c639c82ea2 252 SUPERFAMILY SSF51735 3 251 7.83E-82 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_05950 f0174e6b574d48e4093e74c639c82ea2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.4E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_05950 f0174e6b574d48e4093e74c639c82ea2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 2.4E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_05950 f0174e6b574d48e4093e74c639c82ea2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.4E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_05950 f0174e6b574d48e4093e74c639c82ea2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.4E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_05950 f0174e6b574d48e4093e74c639c82ea2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.4E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_05950 f0174e6b574d48e4093e74c639c82ea2 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.4E-44 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_05950 f0174e6b574d48e4093e74c639c82ea2 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIT_05950 f0174e6b574d48e4093e74c639c82ea2 252 Gene3D G3DSA:3.40.50.720 1 250 8.5E-83 T 13-10-2018 RPIT_05950 f0174e6b574d48e4093e74c639c82ea2 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.2E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_05950 f0174e6b574d48e4093e74c639c82ea2 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.2E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_05950 f0174e6b574d48e4093e74c639c82ea2 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.2E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_05950 f0174e6b574d48e4093e74c639c82ea2 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 249 2.5E-62 T 13-10-2018 RPIT_10270 d3fa99232106f6e2cec3bacf2889f621 558 Pfam PF01343 Peptidase family S49 110 239 8.9E-24 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 RPIT_10270 d3fa99232106f6e2cec3bacf2889f621 558 Pfam PF01343 Peptidase family S49 342 493 4.0E-39 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 RPIT_10270 d3fa99232106f6e2cec3bacf2889f621 558 SUPERFAMILY SSF52096 266 479 1.63E-37 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily RPIT_10270 d3fa99232106f6e2cec3bacf2889f621 558 Gene3D G3DSA:3.90.226.10 49 263 1.9E-122 T 13-10-2018 RPIT_10270 d3fa99232106f6e2cec3bacf2889f621 558 Gene3D G3DSA:3.90.226.10 264 491 1.9E-122 T 13-10-2018 RPIT_10270 d3fa99232106f6e2cec3bacf2889f621 558 Gene3D G3DSA:3.40.1750.10 141 449 1.9E-122 T 13-10-2018 RPIT_10270 d3fa99232106f6e2cec3bacf2889f621 558 PIRSF PIRSF001217 13 517 9.8E-125 T 13-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 RPIT_10270 d3fa99232106f6e2cec3bacf2889f621 558 SUPERFAMILY SSF52096 38 233 2.61E-17 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily RPIT_09910 4dc7460bc90feaf77391d85991c58c40 372 Pfam PF04024 PspC domain 22 62 5.7E-6 T 13-10-2018 IPR007168 Phage shock protein, PspC, N-terminal RPIT_01800 383e233040b51a4700f7c14bf354867e 145 Gene3D G3DSA:3.50.80.10 1 143 3.2E-42 T 13-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily RPIT_01800 383e233040b51a4700f7c14bf354867e 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 140 8.1E-46 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 RPIT_01800 383e233040b51a4700f7c14bf354867e 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 141 6.9E-38 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 RPIT_01800 383e233040b51a4700f7c14bf354867e 145 SUPERFAMILY SSF69500 1 141 7.98E-43 T 13-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily RPIT_01800 383e233040b51a4700f7c14bf354867e 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 141 29.087 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 RPIT_07620 5e6eeb2b4d49db1eb4478aace0aeaba5 119 Pfam PF02635 DsrE/DsrF-like family 5 119 7.6E-9 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein RPIT_07620 5e6eeb2b4d49db1eb4478aace0aeaba5 119 Gene3D G3DSA:3.40.1260.10 1 119 7.2E-23 T 13-10-2018 IPR027396 DsrEFH-like RPIT_07620 5e6eeb2b4d49db1eb4478aace0aeaba5 119 SUPERFAMILY SSF75169 1 119 2.35E-20 T 13-10-2018 IPR027396 DsrEFH-like RPIT_04835 ac0fa7031389f65ad3041ddb761fe883 771 Gene3D G3DSA:3.60.15.10 514 764 3.8E-45 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RPIT_04835 ac0fa7031389f65ad3041ddb761fe883 771 Pfam PF03772 Competence protein 220 481 2.9E-47 T 13-10-2018 IPR004477 ComEC/Rec2-related protein RPIT_04835 ac0fa7031389f65ad3041ddb761fe883 771 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 242 409 7.5E-21 T 13-10-2018 IPR004477 ComEC/Rec2-related protein RPIT_04835 ac0fa7031389f65ad3041ddb761fe883 771 Pfam PF00753 Metallo-beta-lactamase superfamily 522 678 4.0E-10 T 13-10-2018 IPR001279 Metallo-beta-lactamase RPIT_04835 ac0fa7031389f65ad3041ddb761fe883 771 SUPERFAMILY SSF56281 512 767 6.5E-32 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RPIT_04835 ac0fa7031389f65ad3041ddb761fe883 771 SMART SM00849 524 701 0.001 T 13-10-2018 IPR001279 Metallo-beta-lactamase RPIT_05740 4b09f60a9ff6bc6aa5c1f4889551cafb 153 Gene3D G3DSA:3.10.690.10 1 138 5.9E-37 T 13-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 RPIT_05740 4b09f60a9ff6bc6aa5c1f4889551cafb 153 SUPERFAMILY SSF103256 2 133 2.35E-33 T 13-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 RPIT_05740 4b09f60a9ff6bc6aa5c1f4889551cafb 153 Pfam PF02577 Bifunctional nuclease 5 127 5.5E-36 T 13-10-2018 IPR003729 Bifunctional nuclease domain GO:0004518 RPIT_11535 0427d7ed98e2cf0ce78a65c2be5f6711 74 SUPERFAMILY SSF48008 26 67 1.49E-5 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIT_11535 0427d7ed98e2cf0ce78a65c2be5f6711 74 Gene3D G3DSA:1.20.120.530 8 65 1.2E-5 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIT_12155 2a96c10e3bb37db2bb7aa970f9f79fdf 408 Pfam PF10783 Protein of unknown function (DUF2599) 193 265 4.7E-11 T 13-10-2018 IPR019719 Protein of unknown function DUF2599 RPIT_14290 ca0ed35d648a582b5ab5033e47ceb5cc 328 SUPERFAMILY SSF117892 131 262 1.2E-11 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily RPIT_14290 ca0ed35d648a582b5ab5033e47ceb5cc 328 SMART SM00244 96 260 5.6E-10 T 13-10-2018 IPR001107 Band 7 domain RPIT_14290 ca0ed35d648a582b5ab5033e47ceb5cc 328 Pfam PF01145 SPFH domain / Band 7 family 100 274 1.1E-23 T 13-10-2018 IPR001107 Band 7 domain RPIT_14290 ca0ed35d648a582b5ab5033e47ceb5cc 328 Gene3D G3DSA:3.30.479.30 127 262 1.1E-10 T 13-10-2018 RPIT_10150 4396e813fe63a72c6760b1f1f5d10350 192 Gene3D G3DSA:1.10.10.10 117 178 2.7E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_10150 4396e813fe63a72c6760b1f1f5d10350 192 Gene3D G3DSA:1.10.1740.10 11 90 4.6E-25 T 13-10-2018 RPIT_10150 4396e813fe63a72c6760b1f1f5d10350 192 SUPERFAMILY SSF88659 115 176 1.83E-17 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like RPIT_10150 4396e813fe63a72c6760b1f1f5d10350 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 175 4.2E-30 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 RPIT_10150 4396e813fe63a72c6760b1f1f5d10350 192 Pfam PF08281 Sigma-70, region 4 122 172 1.3E-17 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIT_10150 4396e813fe63a72c6760b1f1f5d10350 192 Pfam PF04542 Sigma-70 region 2 23 89 5.3E-21 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_10150 4396e813fe63a72c6760b1f1f5d10350 192 SUPERFAMILY SSF88946 20 101 1.12E-23 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_09210 df8de38e8b8df9bc97403cb2bd557a35 109 SUPERFAMILY SSF52833 11 102 1.61E-19 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_09210 df8de38e8b8df9bc97403cb2bd557a35 109 Pfam PF00085 Thioredoxin 14 102 4.6E-12 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 RPIT_09210 df8de38e8b8df9bc97403cb2bd557a35 109 Gene3D G3DSA:3.40.30.10 2 105 4.2E-19 T 13-10-2018 RPIT_03855 a897d7bbfd09610e496215237b7b9e08 384 SUPERFAMILY SSF51971 8 308 1.0E-5 T 13-10-2018 RPIT_10430 92ffddabebfb9d908df0bb2ced4541f9 498 SUPERFAMILY SSF53098 203 449 4.17E-13 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily RPIT_10430 92ffddabebfb9d908df0bb2ced4541f9 498 Pfam PF01609 Transposase DDE domain 169 441 1.5E-20 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RPIT_12035 3a63f49d08820838541e4bacc984c23f 389 Pfam PF08014 Domain of unknown function (DUF1704) 48 367 3.0E-80 T 13-10-2018 IPR012548 Protein of unknown function DUF1704 RPIT_12035 3a63f49d08820838541e4bacc984c23f 389 SMART SM01154 39 378 5.0E-99 T 13-10-2018 IPR012548 Protein of unknown function DUF1704 RPIT_00215 666392fd58132a8bf8388a889a64c7ed 415 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 22 65 3.0E-8 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RPIT_00215 666392fd58132a8bf8388a889a64c7ed 415 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 77 125 6.5E-9 T 13-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain RPIT_00215 666392fd58132a8bf8388a889a64c7ed 415 Pfam PF01610 Transposase 144 406 3.9E-58 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RPIT_13655 0070d8da3344bfe833b1d523e5201d2a 175 Pfam PF05258 Protein of unknown function (DUF721) 64 150 4.2E-24 T 13-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 RPIT_02305 8109f5f108e86bb2328828deb2f49de4 250 Pfam PF00005 ABC transporter 23 168 3.1E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_02305 8109f5f108e86bb2328828deb2f49de4 250 SMART SM00382 27 222 2.0E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_02305 8109f5f108e86bb2328828deb2f49de4 250 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_02305 8109f5f108e86bb2328828deb2f49de4 250 Gene3D G3DSA:3.40.50.300 1 246 2.8E-56 T 13-10-2018 RPIT_02305 8109f5f108e86bb2328828deb2f49de4 250 SUPERFAMILY SSF52540 2 225 1.85E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_13425 465e2a2152267402f1bf17c834dce60f 114 SUPERFAMILY SSF54593 1 111 4.97E-15 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_13425 465e2a2152267402f1bf17c834dce60f 114 Gene3D G3DSA:3.10.180.10 1 113 3.4E-24 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_12270 1c95666747c4859dc50fc4421b789770 213 Pfam PF14681 Uracil phosphoribosyltransferase 5 210 1.2E-59 T 13-10-2018 RPIT_12270 1c95666747c4859dc50fc4421b789770 213 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 210 2.2E-72 T 13-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 RPIT_12270 1c95666747c4859dc50fc4421b789770 213 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 212 41.938 T 13-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 RPIT_12270 1c95666747c4859dc50fc4421b789770 213 Gene3D G3DSA:3.40.50.2020 1 211 1.9E-69 T 13-10-2018 RPIT_12270 1c95666747c4859dc50fc4421b789770 213 SUPERFAMILY SSF53271 3 210 8.65E-58 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like RPIT_11085 e25069bc523ccced26c2fc85af5c613c 101 Pfam PF01809 Haemolytic domain 14 74 2.6E-6 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor RPIT_08955 bb393df1b067c8b5f5f8ef86da61fe13 482 SMART SM01350 182 470 1.8E-187 T 13-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RPIT_08955 bb393df1b067c8b5f5f8ef86da61fe13 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 182 469 1.9E-116 T 13-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RPIT_08955 bb393df1b067c8b5f5f8ef86da61fe13 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 174 3.5E-47 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 RPIT_08955 bb393df1b067c8b5f5f8ef86da61fe13 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 171 199 2.3E-79 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RPIT_08955 bb393df1b067c8b5f5f8ef86da61fe13 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 252 279 2.3E-79 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RPIT_08955 bb393df1b067c8b5f5f8ef86da61fe13 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 360 382 2.3E-79 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RPIT_08955 bb393df1b067c8b5f5f8ef86da61fe13 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 123 148 2.3E-79 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RPIT_08955 bb393df1b067c8b5f5f8ef86da61fe13 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 7 30 2.3E-79 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RPIT_08955 bb393df1b067c8b5f5f8ef86da61fe13 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 70 99 2.3E-79 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RPIT_08955 bb393df1b067c8b5f5f8ef86da61fe13 482 PIRSF PIRSF000109 1 478 7.0E-199 T 13-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RPIT_08955 bb393df1b067c8b5f5f8ef86da61fe13 482 Gene3D G3DSA:1.10.1040.10 184 436 1.1E-94 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIT_08955 bb393df1b067c8b5f5f8ef86da61fe13 482 SUPERFAMILY SSF48179 180 472 6.24E-110 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 RPIT_08955 bb393df1b067c8b5f5f8ef86da61fe13 482 SUPERFAMILY SSF51735 7 180 2.37E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_08955 bb393df1b067c8b5f5f8ef86da61fe13 482 Gene3D G3DSA:3.40.50.720 3 183 1.1E-52 T 13-10-2018 RPIT_08955 bb393df1b067c8b5f5f8ef86da61fe13 482 Gene3D G3DSA:1.20.5.320 438 472 3.8E-15 T 13-10-2018 RPIT_08955 bb393df1b067c8b5f5f8ef86da61fe13 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 8 470 2.1E-195 T 13-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RPIT_09350 aace899f552c060aec874134bb069431 385 TIGRFAM TIGR04474 tcm_partner: three-Cys-motif partner protein 1 263 2.4E-32 T 13-10-2018 IPR031009 Three-Cys-motif partner protein RPIT_02500 f58a5d331b3d61d88d99773ff2c4846b 295 Pfam PF00589 Phage integrase family 119 265 1.1E-12 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIT_02500 f58a5d331b3d61d88d99773ff2c4846b 295 Gene3D G3DSA:1.10.150.130 3 85 9.1E-11 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal RPIT_02500 f58a5d331b3d61d88d99773ff2c4846b 295 SUPERFAMILY SSF56349 5 272 7.36E-39 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIT_02500 f58a5d331b3d61d88d99773ff2c4846b 295 Gene3D G3DSA:1.10.443.10 99 286 1.4E-29 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 RPIT_13375 9a7a1bcfbd4a826027f3a4fdf74b0f38 346 Pfam PF05661 Protein of unknown function (DUF808) 4 296 6.6E-120 T 13-10-2018 IPR008526 Inner membrane protein YedI RPIT_13375 9a7a1bcfbd4a826027f3a4fdf74b0f38 346 PIRSF PIRSF016660 1 308 1.2E-109 T 13-10-2018 IPR008526 Inner membrane protein YedI RPIT_12205 243934a722727537e95b5c1159b17908 205 Pfam PF00583 Acetyltransferase (GNAT) family 58 179 5.3E-9 T 13-10-2018 IPR000182 GNAT domain RPIT_12205 243934a722727537e95b5c1159b17908 205 Gene3D G3DSA:3.40.630.30 1 203 1.3E-44 T 13-10-2018 RPIT_12205 243934a722727537e95b5c1159b17908 205 SUPERFAMILY SSF55729 5 189 5.66E-25 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_12980 edecabe49b20f0f80d651b552c76f228 585 Pfam PF02374 Anion-transporting ATPase 326 461 4.7E-31 T 13-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 RPIT_12980 edecabe49b20f0f80d651b552c76f228 585 Pfam PF02374 Anion-transporting ATPase 10 291 5.5E-68 T 13-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 RPIT_12980 edecabe49b20f0f80d651b552c76f228 585 Pfam PF02374 Anion-transporting ATPase 483 578 1.4E-6 T 13-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 RPIT_12980 edecabe49b20f0f80d651b552c76f228 585 SUPERFAMILY SSF52540 9 290 7.63E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_12980 edecabe49b20f0f80d651b552c76f228 585 PIRSF PIRSF001327 1 581 1.8E-242 T 13-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 RPIT_12980 edecabe49b20f0f80d651b552c76f228 585 Gene3D G3DSA:3.40.50.300 307 579 5.6E-66 T 13-10-2018 RPIT_12980 edecabe49b20f0f80d651b552c76f228 585 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 13 291 1.9E-69 T 13-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 RPIT_12980 edecabe49b20f0f80d651b552c76f228 585 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 8 566 1.6E-234 T 13-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 RPIT_12980 edecabe49b20f0f80d651b552c76f228 585 Gene3D G3DSA:3.40.50.300 3 293 2.1E-79 T 13-10-2018 RPIT_12980 edecabe49b20f0f80d651b552c76f228 585 SUPERFAMILY SSF52540 318 548 2.0E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_11225 e96c5d5c060c51a3c14f8c84e112504c 202 SUPERFAMILY SSF53335 13 201 1.81E-27 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_11225 e96c5d5c060c51a3c14f8c84e112504c 202 Gene3D G3DSA:3.40.50.150 5 202 3.2E-50 T 13-10-2018 RPIT_11225 e96c5d5c060c51a3c14f8c84e112504c 202 Pfam PF13649 Methyltransferase domain 53 148 9.2E-14 T 13-10-2018 RPIT_08160 99851ab625833fe69c67171930ca4f6f 436 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 45 88 4.8E-6 T 13-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RPIT_08160 99851ab625833fe69c67171930ca4f6f 436 Pfam PF01610 Transposase 164 419 1.2E-63 T 13-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RPIT_10555 1968e616a5e3cfbf0c1b1e84f7898b5e 196 Pfam PF01694 Rhomboid family 51 188 1.2E-25 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RPIT_10555 1968e616a5e3cfbf0c1b1e84f7898b5e 196 SUPERFAMILY SSF144091 15 189 8.63E-30 T 13-10-2018 RPIT_10555 1968e616a5e3cfbf0c1b1e84f7898b5e 196 Gene3D G3DSA:1.20.1540.10 5 192 1.1E-19 T 13-10-2018 IPR035952 Rhomboid-like superfamily RPIT_02150 1fb49fb2d4c87f254d8ecac699c3797f 446 Gene3D G3DSA:1.20.1250.20 11 204 7.1E-41 T 13-10-2018 RPIT_02150 1fb49fb2d4c87f254d8ecac699c3797f 446 Gene3D G3DSA:1.20.1250.20 211 429 9.3E-58 T 13-10-2018 RPIT_02150 1fb49fb2d4c87f254d8ecac699c3797f 446 SUPERFAMILY SSF103473 13 422 1.31E-56 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_02150 1fb49fb2d4c87f254d8ecac699c3797f 446 Pfam PF07690 Major Facilitator Superfamily 26 387 1.4E-36 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIT_08930 5b2d8acacd42d170758d363092625a75 860 Pfam PF11838 ERAP1-like C-terminal domain 535 850 5.5E-49 T 13-10-2018 IPR024571 ERAP1-like C-terminal domain RPIT_08930 5b2d8acacd42d170758d363092625a75 860 Gene3D G3DSA:2.60.40.1730 34 201 1.8E-25 T 13-10-2018 RPIT_08930 5b2d8acacd42d170758d363092625a75 860 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 135 150 8.7E-19 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIT_08930 5b2d8acacd42d170758d363092625a75 860 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 266 276 8.7E-19 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIT_08930 5b2d8acacd42d170758d363092625a75 860 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 300 315 8.7E-19 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIT_08930 5b2d8acacd42d170758d363092625a75 860 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 331 8.7E-19 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIT_08930 5b2d8acacd42d170758d363092625a75 860 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 183 198 8.7E-19 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIT_08930 5b2d8acacd42d170758d363092625a75 860 SUPERFAMILY SSF55486 215 461 4.54E-67 T 13-10-2018 RPIT_08930 5b2d8acacd42d170758d363092625a75 860 TIGRFAM TIGR02412 pepN_strep_liv: aminopeptidase N 5 856 3.0E-277 T 13-10-2018 IPR012778 Peptidase M1, aminopeptidase GO:0004177|GO:0006508 KEGG: 00480+3.4.11.2 RPIT_08930 5b2d8acacd42d170758d363092625a75 860 Gene3D G3DSA:1.10.390.60 209 472 7.7E-65 T 13-10-2018 RPIT_08930 5b2d8acacd42d170758d363092625a75 860 Pfam PF01433 Peptidase family M1 domain 235 452 4.3E-58 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIT_08930 5b2d8acacd42d170758d363092625a75 860 SUPERFAMILY SSF63737 9 200 2.35E-34 T 13-10-2018 RPIT_06630 0336bf8d71aa8aac929640df03deec67 257 SUPERFAMILY SSF53474 3 256 3.0E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_06630 0336bf8d71aa8aac929640df03deec67 257 Gene3D G3DSA:3.40.50.1820 4 255 1.1E-51 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_06630 0336bf8d71aa8aac929640df03deec67 257 Pfam PF12697 Alpha/beta hydrolase family 15 247 7.6E-18 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_08555 8da0fee8e1eec7001cbb39484c2db48b 213 Hamap MF_00052_B Ribonuclease HII [rnhB]. 22 201 33.697 T 13-10-2018 IPR022898 Ribonuclease HII GO:0004523 RPIT_08555 8da0fee8e1eec7001cbb39484c2db48b 213 SUPERFAMILY SSF53098 11 205 1.67E-57 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily RPIT_08555 8da0fee8e1eec7001cbb39484c2db48b 213 Gene3D G3DSA:3.30.420.10 8 212 5.3E-64 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 RPIT_08555 8da0fee8e1eec7001cbb39484c2db48b 213 Pfam PF01351 Ribonuclease HII 24 200 1.6E-31 T 13-10-2018 IPR024567 Ribonuclease HII/HIII domain RPIT_12960 340e65db3ecf790e3ddbc61ad1ea2426 102 Pfam PF02583 Metal-sensitive transcriptional repressor 17 99 1.6E-31 T 13-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 RPIT_12960 340e65db3ecf790e3ddbc61ad1ea2426 102 Gene3D G3DSA:1.20.58.1000 14 102 1.2E-34 T 13-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily RPIT_13490 0e1501815789ff56a02f0aea47f018b0 396 SUPERFAMILY SSF50974 68 374 2.51E-67 T 13-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 RPIT_13490 0e1501815789ff56a02f0aea47f018b0 396 Pfam PF10282 Lactonase, 7-bladed beta-propeller 133 213 8.9E-7 T 13-10-2018 IPR019405 Lactonase, 7-bladed beta propeller RPIT_13490 0e1501815789ff56a02f0aea47f018b0 396 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 195 236 3.7E-9 T 13-10-2018 IPR011964 YVTN beta-propeller repeat RPIT_13490 0e1501815789ff56a02f0aea47f018b0 396 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 326 367 3.0E-10 T 13-10-2018 IPR011964 YVTN beta-propeller repeat RPIT_13490 0e1501815789ff56a02f0aea47f018b0 396 Gene3D G3DSA:2.130.10.10 11 173 6.5E-25 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 RPIT_13490 0e1501815789ff56a02f0aea47f018b0 396 Gene3D G3DSA:2.130.10.10 174 382 2.7E-47 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 RPIT_03615 9cddc3fd55a1b91e7007fb12f1d7aeb8 259 Pfam PF04012 PspA/IM30 family 3 231 6.1E-28 T 13-10-2018 IPR007157 PspA/IM30 RPIT_12625 378ce76efe7c8f3f49edcf3338ad385a 316 Pfam PF00294 pfkB family carbohydrate kinase 12 305 7.2E-60 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB RPIT_12625 378ce76efe7c8f3f49edcf3338ad385a 316 Hamap MF_01987 Ribokinase [rbsK]. 11 312 24.54 T 13-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 RPIT_12625 378ce76efe7c8f3f49edcf3338ad385a 316 Gene3D G3DSA:3.40.1190.20 2 311 5.2E-89 T 13-10-2018 IPR029056 Ribokinase-like RPIT_12625 378ce76efe7c8f3f49edcf3338ad385a 316 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RPIT_12625 378ce76efe7c8f3f49edcf3338ad385a 316 SUPERFAMILY SSF53613 12 308 6.39E-70 T 13-10-2018 IPR029056 Ribokinase-like RPIT_12625 378ce76efe7c8f3f49edcf3338ad385a 316 PRINTS PR00990 Ribokinase signature 113 126 3.1E-31 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 RPIT_12625 378ce76efe7c8f3f49edcf3338ad385a 316 PRINTS PR00990 Ribokinase signature 227 238 3.1E-31 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 RPIT_12625 378ce76efe7c8f3f49edcf3338ad385a 316 PRINTS PR00990 Ribokinase signature 15 36 3.1E-31 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 RPIT_12625 378ce76efe7c8f3f49edcf3338ad385a 316 PRINTS PR00990 Ribokinase signature 178 193 3.1E-31 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 RPIT_12625 378ce76efe7c8f3f49edcf3338ad385a 316 PRINTS PR00990 Ribokinase signature 42 61 3.1E-31 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 RPIT_13370 729f57a3cd4f0cfa0167734184e9df80 312 Gene3D G3DSA:3.40.50.1220 51 298 3.1E-67 T 13-10-2018 RPIT_13370 729f57a3cd4f0cfa0167734184e9df80 312 SUPERFAMILY SSF52467 44 309 7.48E-67 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily RPIT_13370 729f57a3cd4f0cfa0167734184e9df80 312 Pfam PF02146 Sir2 family 55 258 9.3E-37 T 13-10-2018 IPR003000 Sirtuin family GO:0070403 RPIT_13370 729f57a3cd4f0cfa0167734184e9df80 312 Gene3D G3DSA:3.30.1600.10 64 228 3.1E-67 T 13-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily RPIT_09525 1d9be41e8aea8f1534c27bf7a499118a 173 SUPERFAMILY SSF88659 102 159 5.23E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like RPIT_09525 1d9be41e8aea8f1534c27bf7a499118a 173 Gene3D G3DSA:1.10.1740.10 1 100 3.4E-13 T 13-10-2018 RPIT_09525 1d9be41e8aea8f1534c27bf7a499118a 173 Pfam PF04542 Sigma-70 region 2 12 75 5.1E-11 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_09525 1d9be41e8aea8f1534c27bf7a499118a 173 SUPERFAMILY SSF88946 2 84 1.57E-14 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 RPIT_09525 1d9be41e8aea8f1534c27bf7a499118a 173 Gene3D G3DSA:1.10.10.10 101 162 1.8E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_09525 1d9be41e8aea8f1534c27bf7a499118a 173 Pfam PF08281 Sigma-70, region 4 104 155 1.3E-13 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIT_09525 1d9be41e8aea8f1534c27bf7a499118a 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 158 8.3E-20 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 RPIT_09535 9cbd61ac2ffd12c13c170540661ab6ae 716 Pfam PF02446 4-alpha-glucanotransferase 179 678 9.1E-113 T 13-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 RPIT_09535 9cbd61ac2ffd12c13c170540661ab6ae 716 Gene3D G3DSA:3.20.20.80 173 692 5.4E-119 T 13-10-2018 RPIT_09535 9cbd61ac2ffd12c13c170540661ab6ae 716 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 135 679 3.7E-89 T 13-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 RPIT_09535 9cbd61ac2ffd12c13c170540661ab6ae 716 SUPERFAMILY SSF51445 172 687 5.9E-132 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_09795 7b480392d4c093455eaad1aefe5cbf27 403 SUPERFAMILY SSF56112 150 354 7.96E-17 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily RPIT_09795 7b480392d4c093455eaad1aefe5cbf27 403 Gene3D G3DSA:3.90.1200.10 216 403 2.8E-6 T 13-10-2018 RPIT_09795 7b480392d4c093455eaad1aefe5cbf27 403 Pfam PF01636 Phosphotransferase enzyme family 150 339 5.6E-10 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase RPIT_06085 4b2c84328b52906dd77b144ae503dcd4 468 Pfam PF01844 HNH endonuclease 371 404 1.3E-5 T 13-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 RPIT_06085 4b2c84328b52906dd77b144ae503dcd4 468 SMART SM00507 355 407 1.1E-10 T 13-10-2018 IPR003615 HNH nuclease RPIT_06085 4b2c84328b52906dd77b144ae503dcd4 468 Pfam PF02720 Domain of unknown function (DUF222) 43 364 8.4E-32 T 13-10-2018 IPR003870 Domain of unknown function DUF222 RPIT_03420 ecf6f790f00859b0cbb5044b2f26834e 198 Pfam PF05175 Methyltransferase small domain 25 191 1.7E-28 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 RPIT_03420 ecf6f790f00859b0cbb5044b2f26834e 198 Gene3D G3DSA:3.40.50.150 7 194 1.7E-35 T 13-10-2018 RPIT_03420 ecf6f790f00859b0cbb5044b2f26834e 198 SUPERFAMILY SSF53335 24 191 5.79E-27 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_07320 e7468f5447ada402840d7f9a405c9181 221 Gene3D G3DSA:3.40.50.12780 10 187 2.8E-9 T 13-10-2018 RPIT_01745 35d9e6843aacea513b4d73e48f0776b7 404 SUPERFAMILY SSF51445 76 402 4.11E-58 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_01745 35d9e6843aacea513b4d73e48f0776b7 404 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 74 394 6.3E-51 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RPIT_01745 35d9e6843aacea513b4d73e48f0776b7 404 Gene3D G3DSA:3.20.20.300 67 397 6.5E-94 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 RPIT_08990 6ae27aeed5ca479b8e4a176984725c52 610 Gene3D G3DSA:3.40.50.12780 339 469 5.1E-31 T 13-10-2018 RPIT_08990 6ae27aeed5ca479b8e4a176984725c52 610 Gene3D G3DSA:3.40.50.12780 4 338 2.5E-43 T 13-10-2018 RPIT_08990 6ae27aeed5ca479b8e4a176984725c52 610 ProSitePatterns PS00455 Putative AMP-binding domain signature. 197 208 - T 13-10-2018 IPR020845 AMP-binding, conserved site RPIT_08990 6ae27aeed5ca479b8e4a176984725c52 610 SUPERFAMILY SSF56801 14 606 1.23E-108 T 13-10-2018 RPIT_08990 6ae27aeed5ca479b8e4a176984725c52 610 Pfam PF00501 AMP-binding enzyme 20 476 3.3E-84 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 RPIT_00800 0777188be0ca398a8fe0a54bb849b19a 561 SUPERFAMILY SSF51445 30 328 1.35E-16 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_00800 0777188be0ca398a8fe0a54bb849b19a 561 Gene3D G3DSA:3.20.20.70 88 215 6.2E-6 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_00800 0777188be0ca398a8fe0a54bb849b19a 561 Pfam PF02638 Glycosyl hydrolase-like 10 42 348 2.7E-30 T 13-10-2018 IPR003790 Glycosyl hydrolase-like 10 RPIT_12705 98cd73feb4793eaf2030ba2cf15a05de 475 SUPERFAMILY SSF56519 35 117 1.44E-5 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 RPIT_12705 98cd73feb4793eaf2030ba2cf15a05de 475 Gene3D G3DSA:3.90.1310.10 52 373 2.0E-125 T 13-10-2018 RPIT_12705 98cd73feb4793eaf2030ba2cf15a05de 475 Pfam PF00905 Penicillin binding protein transpeptidase domain 155 471 3.7E-68 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RPIT_12705 98cd73feb4793eaf2030ba2cf15a05de 475 SUPERFAMILY SSF56601 98 474 3.07E-87 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like RPIT_12705 98cd73feb4793eaf2030ba2cf15a05de 475 Gene3D G3DSA:3.40.710.10 137 470 2.0E-125 T 13-10-2018 RPIT_10340 07254ee43ff4e58240472c213019b242 420 Gene3D G3DSA:3.40.50.2000 3 243 7.7E-26 T 13-10-2018 RPIT_10340 07254ee43ff4e58240472c213019b242 420 SUPERFAMILY SSF53756 9 413 5.5E-53 T 13-10-2018 RPIT_10340 07254ee43ff4e58240472c213019b242 420 Gene3D G3DSA:3.40.50.2000 245 398 1.4E-25 T 13-10-2018 RPIT_05925 81df6ee2e0e7fd4b057fca633990cd4b 124 Pfam PF02661 Fic/DOC family 14 81 2.5E-6 T 13-10-2018 IPR003812 Fido domain RPIT_05925 81df6ee2e0e7fd4b057fca633990cd4b 124 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 47 118 3.2E-12 T 13-10-2018 IPR006440 Death on curing protein GO:0016301 RPIT_05925 81df6ee2e0e7fd4b057fca633990cd4b 124 Gene3D G3DSA:1.20.120.1870 3 124 8.7E-28 T 13-10-2018 RPIT_03460 cd6cc8195681aef863ee277beb19c6d5 246 Pfam PF02591 C4-type zinc ribbon domain 204 238 7.6E-7 T 13-10-2018 IPR003743 C4-type zinc ribbon domain RPIT_03200 537d08aed6f19f4eeedb7c65cdce8b2a 272 SUPERFAMILY SSF55920 4 254 1.14E-74 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like RPIT_03200 537d08aed6f19f4eeedb7c65cdce8b2a 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 95 111 4.1E-20 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 RPIT_03200 537d08aed6f19f4eeedb7c65cdce8b2a 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 167 179 4.1E-20 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 RPIT_03200 537d08aed6f19f4eeedb7c65cdce8b2a 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 198 210 4.1E-20 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 RPIT_03200 537d08aed6f19f4eeedb7c65cdce8b2a 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 73 86 4.1E-20 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 RPIT_03200 537d08aed6f19f4eeedb7c65cdce8b2a 272 Hamap MF_01974 Methionine aminopeptidase [map]. 3 256 35.725 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 RPIT_03200 537d08aed6f19f4eeedb7c65cdce8b2a 272 Pfam PF00557 Metallopeptidase family M24 13 247 1.3E-45 T 13-10-2018 IPR000994 Peptidase M24 RPIT_03200 537d08aed6f19f4eeedb7c65cdce8b2a 272 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 255 3.2E-78 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 RPIT_03200 537d08aed6f19f4eeedb7c65cdce8b2a 272 Gene3D G3DSA:3.90.230.10 1 261 3.4E-86 T 13-10-2018 RPIT_03200 537d08aed6f19f4eeedb7c65cdce8b2a 272 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 173 191 - T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 RPIT_06710 309d0380a7fc8181324e0209c01ae313 379 Pfam PF00953 Glycosyl transferase family 4 83 241 7.8E-31 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 RPIT_04015 6120cbab8c2d0e7cf4b91339f0407e86 356 ProSitePatterns PS01347 MraY family signature 1. 46 58 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RPIT_04015 6120cbab8c2d0e7cf4b91339f0407e86 356 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 3 349 22.873 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RPIT_04015 6120cbab8c2d0e7cf4b91339f0407e86 356 ProSitePatterns PS01348 MraY family signature 2. 175 186 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RPIT_04015 6120cbab8c2d0e7cf4b91339f0407e86 356 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 17 344 3.8E-92 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RPIT_04015 6120cbab8c2d0e7cf4b91339f0407e86 356 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 46 58 9.9E-6 T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RPIT_04015 6120cbab8c2d0e7cf4b91339f0407e86 356 Pfam PF00953 Glycosyl transferase family 4 81 273 2.6E-39 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 RPIT_05395 6b46ec2fd61437656d90f6648d0aab5b 156 Pfam PF10698 Protein of unknown function (DUF2505) 4 154 2.8E-29 T 13-10-2018 IPR019639 Protein of unknown function DUF2505 RPIT_05395 6b46ec2fd61437656d90f6648d0aab5b 156 SUPERFAMILY SSF55961 1 154 1.99E-6 T 13-10-2018 RPIT_02905 7e5f2ce72d838539455b46c02765c9f9 205 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 24.027 T 13-10-2018 IPR022973 Ribosomal protein L10 RPIT_02905 7e5f2ce72d838539455b46c02765c9f9 205 Gene3D G3DSA:3.30.70.1730 2 153 4.3E-37 T 13-10-2018 RPIT_02905 7e5f2ce72d838539455b46c02765c9f9 205 SUPERFAMILY SSF160369 1 166 7.19E-48 T 13-10-2018 RPIT_02905 7e5f2ce72d838539455b46c02765c9f9 205 Pfam PF00466 Ribosomal protein L10 1 98 1.2E-24 T 13-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 RPIT_05475 44f391079ef5f46847a30012ed51e0b7 250 Pfam PF02754 Cysteine-rich domain 138 222 3.0E-15 T 13-10-2018 IPR004017 Cysteine-rich domain RPIT_05475 44f391079ef5f46847a30012ed51e0b7 250 Pfam PF02754 Cysteine-rich domain 7 87 2.9E-13 T 13-10-2018 IPR004017 Cysteine-rich domain RPIT_07700 b74d9a5ec109c73adea9811201b0cb16 212 Gene3D G3DSA:1.20.120.1630 11 205 8.7E-28 T 13-10-2018 RPIT_07700 b74d9a5ec109c73adea9811201b0cb16 212 Pfam PF04191 Phospholipid methyltransferase 91 191 7.2E-13 T 13-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 RPIT_06895 d3160d044832251d64f6cfe2976687d2 957 Pfam PF03699 Uncharacterised protein family (UPF0182) 19 807 1.2E-259 T 13-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 RPIT_06895 d3160d044832251d64f6cfe2976687d2 957 Hamap MF_01600 UPF0182 protein . 10 889 17.415 T 13-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 RPIT_14735 dfeec0c036e7f0b9cbba3d9d42e47d9f 556 SUPERFAMILY SSF53850 53 550 7.97E-103 T 13-10-2018 RPIT_14735 dfeec0c036e7f0b9cbba3d9d42e47d9f 556 Gene3D G3DSA:3.10.105.10 313 528 5.7E-103 T 13-10-2018 RPIT_14735 dfeec0c036e7f0b9cbba3d9d42e47d9f 556 Gene3D G3DSA:3.90.76.10 91 214 5.7E-103 T 13-10-2018 RPIT_14735 dfeec0c036e7f0b9cbba3d9d42e47d9f 556 Gene3D G3DSA:3.40.190.10 72 541 5.7E-103 T 13-10-2018 RPIT_14735 dfeec0c036e7f0b9cbba3d9d42e47d9f 556 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 103 476 6.3E-61 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain RPIT_14735 dfeec0c036e7f0b9cbba3d9d42e47d9f 556 PIRSF PIRSF002741 2 555 5.4E-79 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RPIT_12825 de7134c22c7380ea6ff278a95bca3aa2 602 Gene3D G3DSA:2.60.120.10 233 490 8.5E-25 T 13-10-2018 IPR014710 RmlC-like jelly roll fold RPIT_12825 de7134c22c7380ea6ff278a95bca3aa2 602 SUPERFAMILY SSF51182 237 586 3.91E-22 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily RPIT_09420 98c3911e6854b9355cdd3bb3082b74b7 764 Gene3D G3DSA:2.130.10.10 398 722 1.0E-6 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 RPIT_09420 98c3911e6854b9355cdd3bb3082b74b7 764 SUPERFAMILY SSF50998 276 638 7.61E-10 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RPIT_09420 98c3911e6854b9355cdd3bb3082b74b7 764 SUPERFAMILY SSF75011 72 311 1.24E-15 T 13-10-2018 RPIT_02690 fb51ef141494034d21c712e9e693e4bd 504 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 6 488 4.5E-138 T 13-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02690 fb51ef141494034d21c712e9e693e4bd 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 6.2E-31 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02690 fb51ef141494034d21c712e9e693e4bd 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 327 346 6.2E-31 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02690 fb51ef141494034d21c712e9e693e4bd 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 135 154 6.2E-31 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02690 fb51ef141494034d21c712e9e693e4bd 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 165 189 6.2E-31 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02690 fb51ef141494034d21c712e9e693e4bd 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 239 263 6.2E-31 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02690 fb51ef141494034d21c712e9e693e4bd 504 Pfam PF00361 Proton-conducting membrane transporter 129 421 3.0E-54 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_12675 925a78c5eb0ccd1df39524372483a594 344 Gene3D G3DSA:1.20.5.170 1 49 1.5E-17 T 13-10-2018 RPIT_12675 925a78c5eb0ccd1df39524372483a594 344 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 16 321 1.2E-103 T 13-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 RPIT_12675 925a78c5eb0ccd1df39524372483a594 344 Gene3D G3DSA:3.40.50.300 50 260 1.4E-78 T 13-10-2018 RPIT_12675 925a78c5eb0ccd1df39524372483a594 344 Gene3D G3DSA:1.10.287.130 263 326 1.7E-15 T 13-10-2018 RPIT_12675 925a78c5eb0ccd1df39524372483a594 344 Pfam PF03308 ArgK protein 21 292 4.4E-105 T 13-10-2018 RPIT_12675 925a78c5eb0ccd1df39524372483a594 344 SUPERFAMILY SSF52540 3 324 4.51E-87 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_14580 90cebb55d29861e4fcc8cdf360d08214 380 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 322 1.8E-84 T 13-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 RPIT_14580 90cebb55d29861e4fcc8cdf360d08214 380 Gene3D G3DSA:1.20.58.1130 10 216 5.0E-88 T 13-10-2018 RPIT_14580 90cebb55d29861e4fcc8cdf360d08214 380 Pfam PF01699 Sodium/calcium exchanger protein 9 145 2.9E-27 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 RPIT_14580 90cebb55d29861e4fcc8cdf360d08214 380 Pfam PF01699 Sodium/calcium exchanger protein 185 327 2.2E-29 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 RPIT_14580 90cebb55d29861e4fcc8cdf360d08214 380 Gene3D G3DSA:1.20.1420.30 36 319 5.0E-88 T 13-10-2018 RPIT_06555 dcd914443033d41d7c45316cd663ec36 383 SUPERFAMILY SSF56112 103 345 7.14E-21 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily RPIT_06555 dcd914443033d41d7c45316cd663ec36 383 Gene3D G3DSA:3.90.1200.10 168 383 2.3E-67 T 13-10-2018 RPIT_06555 dcd914443033d41d7c45316cd663ec36 383 Pfam PF01636 Phosphotransferase enzyme family 104 286 4.9E-8 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase RPIT_13405 e52c3c6f8dab39299617a177ff0de66b 498 Gene3D G3DSA:3.20.20.80 17 382 2.8E-216 T 13-10-2018 RPIT_13405 e52c3c6f8dab39299617a177ff0de66b 498 SUPERFAMILY SSF51011 370 495 2.81E-26 T 13-10-2018 RPIT_13405 e52c3c6f8dab39299617a177ff0de66b 498 SMART SM00813 290 489 7.0E-61 T 13-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 RPIT_13405 e52c3c6f8dab39299617a177ff0de66b 498 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 290 489 6.9E-33 T 13-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 RPIT_13405 e52c3c6f8dab39299617a177ff0de66b 498 SUPERFAMILY SSF51445 17 379 9.97E-109 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_13405 e52c3c6f8dab39299617a177ff0de66b 498 Gene3D G3DSA:2.60.40.1180 5 493 2.8E-216 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta RPIT_00535 faedf0dc8680271e4f3d64a513632fcb 373 Gene3D G3DSA:3.40.50.2000 166 337 4.5E-20 T 13-10-2018 RPIT_00535 faedf0dc8680271e4f3d64a513632fcb 373 Pfam PF13692 Glycosyl transferases group 1 180 322 7.6E-10 T 13-10-2018 RPIT_00535 faedf0dc8680271e4f3d64a513632fcb 373 SUPERFAMILY SSF53756 19 340 2.27E-24 T 13-10-2018 RPIT_05550 3f82b7e2fd5d66b1f7dba9bd149d12c7 145 Pfam PF00692 dUTPase 10 138 3.4E-32 T 13-10-2018 IPR029054 dUTPase-like RPIT_05550 3f82b7e2fd5d66b1f7dba9bd149d12c7 145 TIGRFAM TIGR00576 dut: dUTP diphosphatase 8 138 2.6E-44 T 13-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 RPIT_05550 3f82b7e2fd5d66b1f7dba9bd149d12c7 145 Gene3D G3DSA:2.70.40.10 4 141 1.0E-45 T 13-10-2018 IPR036157 dUTPase-like superfamily RPIT_05550 3f82b7e2fd5d66b1f7dba9bd149d12c7 145 SUPERFAMILY SSF51283 9 138 1.96E-42 T 13-10-2018 IPR036157 dUTPase-like superfamily RPIT_01140 503a189108a76d87e5bc3dd0780d221b 221 Pfam PF08867 FRG domain 12 100 1.0E-18 T 13-10-2018 IPR014966 FRG domain RPIT_01140 503a189108a76d87e5bc3dd0780d221b 221 SMART SM00901 9 115 6.8E-16 T 13-10-2018 IPR014966 FRG domain RPIT_03965 c32789a6413d7961d52369a5b329b93b 725 SMART SM00460 451 521 1.6E-16 T 13-10-2018 IPR002931 Transglutaminase-like RPIT_03965 c32789a6413d7961d52369a5b329b93b 725 Pfam PF01841 Transglutaminase-like superfamily 404 519 2.5E-24 T 13-10-2018 IPR002931 Transglutaminase-like RPIT_03965 c32789a6413d7961d52369a5b329b93b 725 Gene3D G3DSA:3.10.620.30 366 539 1.6E-19 T 13-10-2018 RPIT_03965 c32789a6413d7961d52369a5b329b93b 725 SUPERFAMILY SSF54001 387 533 4.77E-32 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily RPIT_01040 07a08c3758d8c53cc60a54d35ecefcf9 413 SUPERFAMILY SSF55874 299 409 2.8E-10 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_01040 07a08c3758d8c53cc60a54d35ecefcf9 413 Pfam PF07730 Histidine kinase 209 274 1.3E-14 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RPIT_01040 07a08c3758d8c53cc60a54d35ecefcf9 413 Gene3D G3DSA:3.30.565.10 288 411 4.2E-24 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_03445 8d6ce877ec6a838814a97f0774d941df 147 SUPERFAMILY SSF52161 4 144 1.57E-58 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 RPIT_03445 8d6ce877ec6a838814a97f0774d941df 147 Pfam PF00572 Ribosomal protein L13 14 138 2.4E-55 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RPIT_03445 8d6ce877ec6a838814a97f0774d941df 147 Gene3D G3DSA:3.90.1180.10 1 142 2.6E-61 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 RPIT_03445 8d6ce877ec6a838814a97f0774d941df 147 PIRSF PIRSF002181 2 147 7.1E-48 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RPIT_03445 8d6ce877ec6a838814a97f0774d941df 147 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 146 28.279 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RPIT_03445 8d6ce877ec6a838814a97f0774d941df 147 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 141 3.7E-58 T 13-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_05555 84cc2f0bf40cb78cdf403a77288772bf 228 Pfam PF12502 Protein of unknown function (DUF3710) 46 226 2.2E-44 T 13-10-2018 IPR022183 Protein of unknown function DUF3710 RPIT_14250 f8d0c0bc8014157d14a46a278f24f255 890 SMART SM00257 151 199 0.0049 T 13-10-2018 IPR018392 LysM domain RPIT_14250 f8d0c0bc8014157d14a46a278f24f255 890 SMART SM00257 207 256 0.46 T 13-10-2018 IPR018392 LysM domain RPIT_14250 f8d0c0bc8014157d14a46a278f24f255 890 Pfam PF01476 LysM domain 208 256 1.1E-4 T 13-10-2018 IPR018392 LysM domain RPIT_14250 f8d0c0bc8014157d14a46a278f24f255 890 Pfam PF01476 LysM domain 152 199 4.0E-6 T 13-10-2018 IPR018392 LysM domain RPIT_14250 f8d0c0bc8014157d14a46a278f24f255 890 Gene3D G3DSA:3.10.350.10 148 199 2.8E-9 T 13-10-2018 IPR036779 LysM domain superfamily RPIT_14250 f8d0c0bc8014157d14a46a278f24f255 890 Gene3D G3DSA:3.10.350.10 207 255 3.4E-9 T 13-10-2018 IPR036779 LysM domain superfamily RPIT_05345 42df0f4fd7c3aaf55c602c796a99b52e 245 Pfam PF00156 Phosphoribosyl transferase domain 150 231 5.0E-9 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIT_05345 42df0f4fd7c3aaf55c602c796a99b52e 245 SUPERFAMILY SSF53271 92 228 7.24E-21 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like RPIT_05345 42df0f4fd7c3aaf55c602c796a99b52e 245 Gene3D G3DSA:3.40.50.2020 85 243 4.9E-16 T 13-10-2018 RPIT_08510 1abb102c9eae2fe19f7196a95140ce79 375 Pfam PF02361 Cobalt transport protein 15 227 9.0E-12 T 13-10-2018 IPR003339 ABC/ECF transporter, transmembrane component RPIT_06805 436002836fcc2c9f594b8562435e5a59 232 Gene3D G3DSA:3.90.1680.10 1 232 6.1E-70 T 13-10-2018 IPR036590 SOS response associated peptidase-like RPIT_06805 436002836fcc2c9f594b8562435e5a59 232 SUPERFAMILY SSF143081 2 225 2.22E-61 T 13-10-2018 IPR036590 SOS response associated peptidase-like RPIT_06805 436002836fcc2c9f594b8562435e5a59 232 Pfam PF02586 SOS response associated peptidase (SRAP) 1 219 3.9E-62 T 13-10-2018 IPR003738 SOS response associated peptidase (SRAP) RPIT_08405 571edb3cd371e4e37854f4007ab62f4d 190 Pfam PF00872 Transposase, Mutator family 48 189 2.6E-37 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIT_00600 e05089bf22bcaed43508e0795971779c 341 Gene3D G3DSA:3.90.180.10 20 327 5.5E-101 T 13-10-2018 RPIT_00600 e05089bf22bcaed43508e0795971779c 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 132 7.6E-31 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIT_00600 e05089bf22bcaed43508e0795971779c 341 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 322 337 4.7E-5 T 13-10-2018 RPIT_00600 e05089bf22bcaed43508e0795971779c 341 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 166 188 4.7E-5 T 13-10-2018 RPIT_00600 e05089bf22bcaed43508e0795971779c 341 Gene3D G3DSA:3.40.50.720 153 286 5.5E-101 T 13-10-2018 RPIT_00600 e05089bf22bcaed43508e0795971779c 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 55.389 T 13-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 RPIT_00600 e05089bf22bcaed43508e0795971779c 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RPIT_00600 e05089bf22bcaed43508e0795971779c 341 SUPERFAMILY SSF50129 1 173 1.02E-50 T 13-10-2018 IPR011032 GroES-like superfamily RPIT_00600 e05089bf22bcaed43508e0795971779c 341 SMART SM00829 10 338 0.0039 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIT_00600 e05089bf22bcaed43508e0795971779c 341 SUPERFAMILY SSF51735 142 300 2.14E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_00600 e05089bf22bcaed43508e0795971779c 341 Pfam PF00107 Zinc-binding dehydrogenase 174 302 1.7E-22 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIT_12470 d5931d1a66418e43ef2e31e115fc02ad 197 Pfam PF01909 Nucleotidyltransferase domain 93 162 1.2E-8 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 RPIT_12470 d5931d1a66418e43ef2e31e115fc02ad 197 Gene3D G3DSA:3.30.460.10 86 185 4.6E-14 T 13-10-2018 RPIT_12470 d5931d1a66418e43ef2e31e115fc02ad 197 SUPERFAMILY SSF81301 87 187 2.66E-17 T 13-10-2018 RPIT_04890 0b6716bbd54e34267266b43e20c1cd4b 125 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 72 3.6E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_04890 0b6716bbd54e34267266b43e20c1cd4b 125 Gene3D G3DSA:1.10.10.10 6 118 1.7E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_04890 0b6716bbd54e34267266b43e20c1cd4b 125 SUPERFAMILY SSF46785 2 76 2.29E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_04890 0b6716bbd54e34267266b43e20c1cd4b 125 SMART SM00345 13 72 4.4E-11 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_12020 1a63335c348baf4223c85014bfa2b09b 374 Pfam PF08007 Cupin superfamily protein 13 247 2.4E-18 T 13-10-2018 IPR003347 JmjC domain RPIT_12020 1a63335c348baf4223c85014bfa2b09b 374 SUPERFAMILY SSF51197 11 234 6.73E-31 T 13-10-2018 RPIT_12020 1a63335c348baf4223c85014bfa2b09b 374 Gene3D G3DSA:2.60.120.650 6 207 1.3E-44 T 13-10-2018 RPIT_12670 b9327e6f515926a4fb2ae047dbb778b8 763 Pfam PF07676 WD40-like Beta Propeller Repeat 170 188 0.19 T 13-10-2018 IPR011659 WD40-like Beta Propeller RPIT_12670 b9327e6f515926a4fb2ae047dbb778b8 763 Pfam PF07676 WD40-like Beta Propeller Repeat 227 245 0.2 T 13-10-2018 IPR011659 WD40-like Beta Propeller RPIT_12670 b9327e6f515926a4fb2ae047dbb778b8 763 Gene3D G3DSA:2.120.10.30 212 356 2.1E-8 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like RPIT_12670 b9327e6f515926a4fb2ae047dbb778b8 763 Gene3D G3DSA:2.120.10.60 83 211 9.1E-10 T 13-10-2018 RPIT_12670 b9327e6f515926a4fb2ae047dbb778b8 763 SUPERFAMILY SSF103647 480 524 2.22E-5 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 RPIT_12670 b9327e6f515926a4fb2ae047dbb778b8 763 SUPERFAMILY SSF82171 94 339 9.42E-17 T 13-10-2018 RPIT_02330 97fc6050d02c6b15625e241a5b0144fc 296 SUPERFAMILY SSF53098 122 288 9.61E-37 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily RPIT_02330 97fc6050d02c6b15625e241a5b0144fc 296 Gene3D G3DSA:3.30.420.10 127 293 2.4E-13 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 RPIT_02330 97fc6050d02c6b15625e241a5b0144fc 296 Pfam PF00665 Integrase core domain 129 242 1.2E-26 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 RPIT_02330 97fc6050d02c6b15625e241a5b0144fc 296 Pfam PF13276 HTH-like domain 50 102 4.3E-9 T 13-10-2018 IPR025948 HTH-like domain RPIT_05570 53cfd018a52f50fd7cd35025b8769886 593 Pfam PF02378 Phosphotransferase system, EIIC 115 411 1.4E-25 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RPIT_05570 53cfd018a52f50fd7cd35025b8769886 593 Pfam PF00367 phosphotransferase system, EIIB 513 547 1.4E-6 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RPIT_05570 53cfd018a52f50fd7cd35025b8769886 593 Pfam PF00367 phosphotransferase system, EIIB 5 38 1.5E-15 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RPIT_05570 53cfd018a52f50fd7cd35025b8769886 593 Gene3D G3DSA:3.30.1360.60 507 587 9.2E-11 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 RPIT_05570 53cfd018a52f50fd7cd35025b8769886 593 SUPERFAMILY SSF55604 511 585 4.18E-10 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 RPIT_05570 53cfd018a52f50fd7cd35025b8769886 593 SUPERFAMILY SSF55604 4 77 1.06E-17 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 RPIT_05570 53cfd018a52f50fd7cd35025b8769886 593 Gene3D G3DSA:3.30.1360.60 1 75 2.2E-20 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 RPIT_05570 53cfd018a52f50fd7cd35025b8769886 593 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 16 33 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RPIT_14220 247e4e2fe6dedf33dcc5d35aeaf891a4 212 SMART SM00858 58 121 7.0E-6 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 RPIT_14220 247e4e2fe6dedf33dcc5d35aeaf891a4 212 Pfam PF08666 SAF domain 59 113 1.4E-5 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 RPIT_08015 959fbe25126b7d9599fcd392a1fb623e 311 Pfam PF13280 WYL domain 148 310 1.4E-16 T 13-10-2018 IPR026881 WYL domain RPIT_09205 f9e11766e68cb8f28c446f06d1f20b46 572 Gene3D G3DSA:2.60.40.1180 486 571 1.3E-12 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta RPIT_09205 f9e11766e68cb8f28c446f06d1f20b46 572 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 31 564 2.4E-242 T 13-10-2018 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622|MetaCyc: PWY-7900 RPIT_09205 f9e11766e68cb8f28c446f06d1f20b46 572 SMART SM00642 39 446 2.1E-103 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_09205 f9e11766e68cb8f28c446f06d1f20b46 572 Gene3D G3DSA:3.90.400.10 129 198 1.3E-199 T 13-10-2018 RPIT_09205 f9e11766e68cb8f28c446f06d1f20b46 572 SUPERFAMILY SSF51011 486 565 2.33E-8 T 13-10-2018 RPIT_09205 f9e11766e68cb8f28c446f06d1f20b46 572 SUPERFAMILY SSF51445 29 483 9.11E-126 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_09205 f9e11766e68cb8f28c446f06d1f20b46 572 Pfam PF16657 Maltogenic Amylase, C-terminal domain 486 563 4.1E-11 T 13-10-2018 IPR032091 Maltogenic Amylase, C-terminal RPIT_09205 f9e11766e68cb8f28c446f06d1f20b46 572 Gene3D G3DSA:3.20.20.80 31 480 1.3E-199 T 13-10-2018 RPIT_09205 f9e11766e68cb8f28c446f06d1f20b46 572 Pfam PF00128 Alpha amylase, catalytic domain 54 406 6.2E-70 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_12730 2b7e88911a00b022fb39b641cffa1e63 218 SUPERFAMILY SSF56784 11 203 2.81E-45 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_12730 2b7e88911a00b022fb39b641cffa1e63 218 Gene3D G3DSA:3.40.50.1000 66 215 4.3E-41 T 13-10-2018 IPR023214 HAD superfamily RPIT_12730 2b7e88911a00b022fb39b641cffa1e63 218 Gene3D G3DSA:1.10.150.240 9 46 5.7E-5 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RPIT_12730 2b7e88911a00b022fb39b641cffa1e63 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 182 3.7E-25 T 13-10-2018 RPIT_12730 2b7e88911a00b022fb39b641cffa1e63 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 182 9.6E-19 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 RPIT_13110 982dcf940e4ab7981fe191579354c225 466 Gene3D G3DSA:3.30.460.10 10 152 6.5E-37 T 13-10-2018 RPIT_13110 982dcf940e4ab7981fe191579354c225 466 TIGRFAM TIGR02692 tRNA_CCA_actino: CCA tRNA nucleotidyltransferase 2 464 1.6E-219 T 13-10-2018 IPR014065 tRNA adenylyltransferase RPIT_13110 982dcf940e4ab7981fe191579354c225 466 SUPERFAMILY SSF81891 151 465 7.32E-65 T 13-10-2018 RPIT_13110 982dcf940e4ab7981fe191579354c225 466 Pfam PF01743 Poly A polymerase head domain 25 153 1.1E-31 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 RPIT_13110 982dcf940e4ab7981fe191579354c225 466 Gene3D G3DSA:1.10.3090.10 153 448 1.9E-45 T 13-10-2018 RPIT_13110 982dcf940e4ab7981fe191579354c225 466 SUPERFAMILY SSF81301 7 149 1.2E-34 T 13-10-2018 RPIT_13110 982dcf940e4ab7981fe191579354c225 466 Pfam PF01966 HD domain 255 380 7.0E-15 T 13-10-2018 IPR006674 HD domain RPIT_13110 982dcf940e4ab7981fe191579354c225 466 SMART SM00471 251 391 0.002 T 13-10-2018 IPR003607 HD/PDEase domain RPIT_13110 982dcf940e4ab7981fe191579354c225 466 TIGRFAM TIGR00277 HDIG: HDIG domain 252 331 2.6E-16 T 13-10-2018 IPR006675 HDIG domain RPIT_13110 982dcf940e4ab7981fe191579354c225 466 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 180 241 5.6E-17 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 RPIT_13755 876ba817008bfc6556815f9e1bf30502 363 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 154 177 7.4E-5 T 13-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 RPIT_13755 876ba817008bfc6556815f9e1bf30502 363 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 127 147 7.4E-5 T 13-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 RPIT_13755 876ba817008bfc6556815f9e1bf30502 363 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 28 49 7.4E-5 T 13-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 RPIT_13755 876ba817008bfc6556815f9e1bf30502 363 PRINTS PR00933 B-lytic metalloendopeptidase (M23) signature 76 94 7.4E-5 T 13-10-2018 IPR000841 Peptidase M23A, B-lytic metalloendopeptidase GO:0004222|GO:0006508 RPIT_13755 876ba817008bfc6556815f9e1bf30502 363 SUPERFAMILY SSF51261 53 147 9.42E-16 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_13755 876ba817008bfc6556815f9e1bf30502 363 Pfam PF01551 Peptidase family M23 52 148 2.6E-14 T 13-10-2018 IPR016047 Peptidase M23 RPIT_13755 876ba817008bfc6556815f9e1bf30502 363 Gene3D G3DSA:2.70.70.10 25 190 4.4E-25 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_13975 7ccf6b2eaec3124184e56b9f60de6c78 312 Gene3D G3DSA:3.60.10.10 95 309 6.2E-13 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily RPIT_13975 7ccf6b2eaec3124184e56b9f60de6c78 312 SUPERFAMILY SSF56219 96 294 2.16E-16 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily RPIT_13975 7ccf6b2eaec3124184e56b9f60de6c78 312 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 99 294 5.2E-6 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase RPIT_06845 44504dbcb45cb03937b29abd2bda18a1 269 Gene3D G3DSA:1.10.3720.10 54 268 1.1E-22 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_06845 44504dbcb45cb03937b29abd2bda18a1 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 266 3.1E-34 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_06845 44504dbcb45cb03937b29abd2bda18a1 269 SUPERFAMILY SSF161098 60 247 4.06E-26 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_04445 5272509c6fbcfe81a0433795a6a8bc5b 155 Gene3D G3DSA:2.40.50.140 89 147 1.5E-15 T 13-10-2018 RPIT_04445 5272509c6fbcfe81a0433795a6a8bc5b 155 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 148 1.3E-18 T 13-10-2018 IPR002810 NfeD-like, C-terminal domain RPIT_04445 5272509c6fbcfe81a0433795a6a8bc5b 155 SUPERFAMILY SSF141322 85 146 2.09E-8 T 13-10-2018 RPIT_03640 58505813ec2a2119c300719732308488 570 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 36 479 1.9E-141 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03640 58505813ec2a2119c300719732308488 570 SUPERFAMILY SSF81442 24 532 2.22E-170 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03640 58505813ec2a2119c300719732308488 570 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 256 310 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03640 58505813ec2a2119c300719732308488 570 Gene3D G3DSA:1.20.210.10 14 539 1.0E-198 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03640 58505813ec2a2119c300719732308488 570 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 27 531 7.9E-211 T 13-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 RPIT_03640 58505813ec2a2119c300719732308488 570 PRINTS PR01165 Cytochrome c oxidase subunit I signature 143 155 2.6E-99 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03640 58505813ec2a2119c300719732308488 570 PRINTS PR01165 Cytochrome c oxidase subunit I signature 175 193 2.6E-99 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03640 58505813ec2a2119c300719732308488 570 PRINTS PR01165 Cytochrome c oxidase subunit I signature 322 343 2.6E-99 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03640 58505813ec2a2119c300719732308488 570 PRINTS PR01165 Cytochrome c oxidase subunit I signature 100 124 2.6E-99 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03640 58505813ec2a2119c300719732308488 570 PRINTS PR01165 Cytochrome c oxidase subunit I signature 204 223 2.6E-99 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03640 58505813ec2a2119c300719732308488 570 PRINTS PR01165 Cytochrome c oxidase subunit I signature 254 275 2.6E-99 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03640 58505813ec2a2119c300719732308488 570 PRINTS PR01165 Cytochrome c oxidase subunit I signature 26 51 2.6E-99 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03640 58505813ec2a2119c300719732308488 570 PRINTS PR01165 Cytochrome c oxidase subunit I signature 357 375 2.6E-99 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03640 58505813ec2a2119c300719732308488 570 PRINTS PR01165 Cytochrome c oxidase subunit I signature 73 96 2.6E-99 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03640 58505813ec2a2119c300719732308488 570 PRINTS PR01165 Cytochrome c oxidase subunit I signature 233 254 2.6E-99 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03640 58505813ec2a2119c300719732308488 570 PRINTS PR01165 Cytochrome c oxidase subunit I signature 300 315 2.6E-99 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03640 58505813ec2a2119c300719732308488 570 PRINTS PR01165 Cytochrome c oxidase subunit I signature 435 456 2.6E-99 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_03640 58505813ec2a2119c300719732308488 570 PRINTS PR01165 Cytochrome c oxidase subunit I signature 385 404 2.6E-99 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_07815 6e5f5f7a82d3232870c79530853464dc 142 Gene3D G3DSA:3.40.50.1010 1 139 2.9E-33 T 13-10-2018 RPIT_07815 6e5f5f7a82d3232870c79530853464dc 142 SUPERFAMILY SSF88723 2 137 1.51E-24 T 13-10-2018 IPR029060 PIN-like domain superfamily RPIT_07815 6e5f5f7a82d3232870c79530853464dc 142 Pfam PF01850 PIN domain 2 129 3.1E-8 T 13-10-2018 IPR002716 PIN domain RPIT_07815 6e5f5f7a82d3232870c79530853464dc 142 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 135 10.019 T 13-10-2018 IPR022907 VapC family GO:0004540 RPIT_09750 068a0e049c8f583b33db9237f73ee386 150 Pfam PF11070 Protein of unknown function (DUF2871) 3 133 1.1E-33 T 13-10-2018 IPR021299 Protein of unknown function DUF2871 RPIT_01385 05890e332dd8126722972b7168c180cd 155 Gene3D G3DSA:3.30.1330.40 1 151 4.3E-56 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 RPIT_01385 05890e332dd8126722972b7168c180cd 155 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 5 150 1.7E-34 T 13-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RPIT_01385 05890e332dd8126722972b7168c180cd 155 SUPERFAMILY SSF55298 1 150 3.3E-52 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 RPIT_14445 4d87823f34ea366b020618977a4b0215 121 Pfam PF03334 Na+/H+ antiporter subunit 12 91 3.1E-22 T 13-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 RPIT_14445 4d87823f34ea366b020618977a4b0215 121 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 98 7.6E-23 T 13-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 RPIT_07050 c0124e3f41fc7849635ede87da3def55 271 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 5 269 2.4E-67 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 RPIT_07050 c0124e3f41fc7849635ede87da3def55 271 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 73 87 - T 13-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 RPIT_07050 c0124e3f41fc7849635ede87da3def55 271 SUPERFAMILY SSF54506 141 269 3.66E-34 T 13-10-2018 RPIT_07050 c0124e3f41fc7849635ede87da3def55 271 Gene3D G3DSA:3.10.310.10 125 258 3.7E-85 T 13-10-2018 RPIT_07050 c0124e3f41fc7849635ede87da3def55 271 SUPERFAMILY SSF54506 5 132 1.53E-31 T 13-10-2018 RPIT_07050 c0124e3f41fc7849635ede87da3def55 271 Gene3D G3DSA:3.10.310.10 6 264 3.7E-85 T 13-10-2018 RPIT_07050 c0124e3f41fc7849635ede87da3def55 271 Pfam PF01678 Diaminopimelate epimerase 151 263 2.0E-23 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 RPIT_07050 c0124e3f41fc7849635ede87da3def55 271 Pfam PF01678 Diaminopimelate epimerase 6 133 1.8E-27 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 RPIT_07050 c0124e3f41fc7849635ede87da3def55 271 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 4 271 29.683 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 RPIT_08825 6f893e070fe691e204f3eae6ea58a296 295 Pfam PF01734 Patatin-like phospholipase 12 99 6.3E-9 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 RPIT_08825 6f893e070fe691e204f3eae6ea58a296 295 Gene3D G3DSA:3.40.1090.10 3 70 2.0E-8 T 13-10-2018 RPIT_08825 6f893e070fe691e204f3eae6ea58a296 295 SUPERFAMILY SSF52151 10 287 2.2E-29 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RPIT_03230 16b8240b5731563dba3271c2dedf22c1 295 PIRSF PIRSF036628 5 279 2.7E-79 T 13-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 RPIT_03230 16b8240b5731563dba3271c2dedf22c1 295 Gene3D G3DSA:2.60.120.10 23 128 1.5E-77 T 13-10-2018 IPR014710 RmlC-like jelly roll fold RPIT_03230 16b8240b5731563dba3271c2dedf22c1 295 Gene3D G3DSA:2.60.120.10 129 273 1.5E-77 T 13-10-2018 IPR014710 RmlC-like jelly roll fold RPIT_03230 16b8240b5731563dba3271c2dedf22c1 295 SUPERFAMILY SSF51182 17 256 4.0E-55 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily RPIT_03230 16b8240b5731563dba3271c2dedf22c1 295 Pfam PF04962 KduI/IolB family 10 273 1.6E-82 T 13-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 RPIT_03230 16b8240b5731563dba3271c2dedf22c1 295 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 22 273 1.8E-90 T 13-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 RPIT_01710 cb380efb915521db2d9932aac3d68921 183 SUPERFAMILY SSF52833 4 178 4.74E-31 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_01710 cb380efb915521db2d9932aac3d68921 183 Gene3D G3DSA:3.40.30.10 37 182 3.1E-35 T 13-10-2018 RPIT_01710 cb380efb915521db2d9932aac3d68921 183 Pfam PF08534 Redoxin 50 167 8.7E-17 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 RPIT_01710 cb380efb915521db2d9932aac3d68921 183 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 RPIT_07930 ea4998182a49c6a2c8c3c91f359bf920 308 Pfam PF02517 CAAX protease self-immunity 165 254 1.1E-14 T 13-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 RPIT_11865 6456cfee9f6ce5dc9ed0b0fd92770286 154 Gene3D G3DSA:3.40.190.10 21 154 2.7E-14 T 13-10-2018 RPIT_11865 6456cfee9f6ce5dc9ed0b0fd92770286 154 SUPERFAMILY SSF53850 2 118 3.1E-13 T 13-10-2018 RPIT_11865 6456cfee9f6ce5dc9ed0b0fd92770286 154 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 117 6.5E-6 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIT_02425 40e3b2604f66d65c00c86c926258c172 161 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 19 160 6.6E-11 T 13-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal RPIT_02425 40e3b2604f66d65c00c86c926258c172 161 Gene3D G3DSA:1.10.3820.10 12 161 1.2E-36 T 13-10-2018 IPR038266 NapC/NirT cytochrome c superfamily RPIT_02425 40e3b2604f66d65c00c86c926258c172 161 TIGRFAM TIGR03153 cytochr_NrfH: cytochrome c nitrite reductase, small subunit 23 158 9.1E-48 T 13-10-2018 IPR017571 Cytochrome c nitrite reductase, small subunit GO:0016021|GO:0022900 RPIT_02425 40e3b2604f66d65c00c86c926258c172 161 SUPERFAMILY SSF48695 18 159 2.02E-21 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily RPIT_02860 3c668df2bf467606e1426abc2296ee74 142 Gene3D G3DSA:1.10.10.250 74 142 9.7E-31 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily RPIT_02860 3c668df2bf467606e1426abc2296ee74 142 SUPERFAMILY SSF54747 4 74 3.01E-26 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily RPIT_02860 3c668df2bf467606e1426abc2296ee74 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 7 142 28.796 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RPIT_02860 3c668df2bf467606e1426abc2296ee74 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 38 75 4.0E-15 T 13-10-2018 RPIT_02860 3c668df2bf467606e1426abc2296ee74 142 Gene3D G3DSA:3.30.1550.10 4 73 2.8E-29 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily RPIT_02860 3c668df2bf467606e1426abc2296ee74 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 11 68 1.1E-24 T 13-10-2018 IPR020784 Ribosomal protein L11, N-terminal RPIT_02860 3c668df2bf467606e1426abc2296ee74 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 5 142 1.9E-59 T 13-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_02860 3c668df2bf467606e1426abc2296ee74 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 73 141 2.5E-25 T 13-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIT_02860 3c668df2bf467606e1426abc2296ee74 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 128 142 - T 13-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RPIT_02860 3c668df2bf467606e1426abc2296ee74 142 SMART SM00649 11 142 7.0E-80 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RPIT_02860 3c668df2bf467606e1426abc2296ee74 142 SUPERFAMILY SSF46906 69 142 6.8E-27 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily RPIT_10040 01a8c888c54fcc8f5770f3efb36ac2e8 161 SUPERFAMILY SSF55729 2 147 1.89E-27 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_10040 01a8c888c54fcc8f5770f3efb36ac2e8 161 Pfam PF00583 Acetyltransferase (GNAT) family 30 120 9.0E-12 T 13-10-2018 IPR000182 GNAT domain RPIT_10040 01a8c888c54fcc8f5770f3efb36ac2e8 161 Gene3D G3DSA:3.40.630.30 3 147 3.2E-29 T 13-10-2018 RPIT_02485 036c0fd8c7f892b69630e53f31c2c31f 210 SUPERFAMILY SSF52029 78 206 7.33E-13 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily RPIT_02485 036c0fd8c7f892b69630e53f31c2c31f 210 Gene3D G3DSA:3.50.7.10 75 209 6.5E-14 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily RPIT_09305 0c74fffce9a17e07aa95a53c4d1a5ade 359 Gene3D G3DSA:3.40.50.2000 21 352 1.5E-59 T 13-10-2018 RPIT_09305 0c74fffce9a17e07aa95a53c4d1a5ade 359 Pfam PF00534 Glycosyl transferases group 1 188 320 9.2E-15 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 RPIT_09305 0c74fffce9a17e07aa95a53c4d1a5ade 359 SUPERFAMILY SSF53756 18 353 2.04E-53 T 13-10-2018 RPIT_09305 0c74fffce9a17e07aa95a53c4d1a5ade 359 Gene3D G3DSA:3.40.50.2000 170 346 1.5E-59 T 13-10-2018 RPIT_09305 0c74fffce9a17e07aa95a53c4d1a5ade 359 Pfam PF13439 Glycosyltransferase Family 4 20 176 4.3E-19 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RPIT_04355 ac3f9cf2849c5e664d153c60f59f7b8d 254 SUPERFAMILY SSF52540 6 233 1.74E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04355 ac3f9cf2849c5e664d153c60f59f7b8d 254 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 246 6.5E-100 T 13-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 RPIT_04355 ac3f9cf2849c5e664d153c60f59f7b8d 254 Pfam PF00005 ABC transporter 23 174 1.2E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_04355 ac3f9cf2849c5e664d153c60f59f7b8d 254 SMART SM00382 32 233 3.8E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_04355 ac3f9cf2849c5e664d153c60f59f7b8d 254 Gene3D G3DSA:3.40.50.300 2 247 1.6E-53 T 13-10-2018 RPIT_13585 d03cc1672f23cb08458252bac49089c7 374 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 51 265 9.2E-60 T 13-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RPIT_13585 d03cc1672f23cb08458252bac49089c7 374 Pfam PF02096 60Kd inner membrane protein 52 264 1.6E-53 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 RPIT_05940 ca139904489e38bf84a78320505b34b9 208 Gene3D G3DSA:3.40.50.1820 14 201 2.4E-27 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_05940 ca139904489e38bf84a78320505b34b9 208 SUPERFAMILY SSF53474 12 184 5.95E-20 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_05940 ca139904489e38bf84a78320505b34b9 208 Pfam PF07819 PGAP1-like protein 71 166 9.8E-7 T 13-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 RPIT_08735 032c66b1e92e9f23e75ff7d51e1a5ee5 232 TIGRFAM TIGR03936 sam_1_link_chp: radical SAM-linked protein 16 215 2.5E-54 T 13-10-2018 IPR018768 Domain of unknown function DUF2344 RPIT_08735 032c66b1e92e9f23e75ff7d51e1a5ee5 232 Pfam PF10105 Uncharacterized protein conserved in bacteria (DUF2344) 16 194 8.3E-46 T 13-10-2018 IPR018768 Domain of unknown function DUF2344 RPIT_03680 72f52a976ad6f2ea42b8a501c97729be 385 Pfam PF12698 ABC-2 family transporter protein 32 358 2.7E-26 T 13-10-2018 RPIT_13690 cf7fc6d1b7e8a1d1d039ef3fbaa72bac 288 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 225 282 1.7E-6 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 RPIT_13690 cf7fc6d1b7e8a1d1d039ef3fbaa72bac 288 SUPERFAMILY SSF52777 34 282 7.17E-14 T 13-10-2018 RPIT_13690 cf7fc6d1b7e8a1d1d039ef3fbaa72bac 288 Gene3D G3DSA:3.30.559.10 169 284 4.1E-8 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 RPIT_12540 e8d3ef9286629505d173b91eb2f6082e 254 SMART SM00345 31 90 4.8E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_12540 e8d3ef9286629505d173b91eb2f6082e 254 SUPERFAMILY SSF64288 78 249 8.95E-46 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RPIT_12540 e8d3ef9286629505d173b91eb2f6082e 254 Pfam PF07702 UTRA domain 111 246 7.6E-35 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RPIT_12540 e8d3ef9286629505d173b91eb2f6082e 254 SMART SM00866 110 247 5.9E-35 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RPIT_12540 e8d3ef9286629505d173b91eb2f6082e 254 Gene3D G3DSA:1.10.10.10 9 90 1.3E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_12540 e8d3ef9286629505d173b91eb2f6082e 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 90 9.0E-13 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_12540 e8d3ef9286629505d173b91eb2f6082e 254 Gene3D G3DSA:3.40.1410.10 94 252 1.6E-44 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RPIT_12540 e8d3ef9286629505d173b91eb2f6082e 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 64 80 5.7E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_12540 e8d3ef9286629505d173b91eb2f6082e 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 64 5.7E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIT_12540 e8d3ef9286629505d173b91eb2f6082e 254 SUPERFAMILY SSF46785 20 99 2.97E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_05060 98700e1be0169062ef09963d6b82264e 133 Pfam PF01475 Ferric uptake regulator family 8 123 2.0E-29 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 RPIT_05060 98700e1be0169062ef09963d6b82264e 133 SUPERFAMILY SSF46785 8 128 1.15E-32 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_05060 98700e1be0169062ef09963d6b82264e 133 Gene3D G3DSA:3.30.1490.190 80 131 1.3E-21 T 13-10-2018 RPIT_05060 98700e1be0169062ef09963d6b82264e 133 Gene3D G3DSA:1.10.10.10 1 79 8.6E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_02100 2a451968903eb545902075c772ac4699 306 SUPERFAMILY SSF54001 186 304 2.45E-38 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily RPIT_02100 2a451968903eb545902075c772ac4699 306 Pfam PF00877 NlpC/P60 family 205 296 1.1E-24 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain RPIT_02100 2a451968903eb545902075c772ac4699 306 Gene3D G3DSA:3.90.1720.10 123 304 1.2E-46 T 13-10-2018 RPIT_11325 b0a6a323194701dc62160169c2a2d923 245 SMART SM00855 3 189 2.1E-15 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_11325 b0a6a323194701dc62160169c2a2d923 245 SUPERFAMILY SSF53254 1 220 1.24E-52 T 13-10-2018 IPR029033 Histidine phosphatase superfamily RPIT_11325 b0a6a323194701dc62160169c2a2d923 245 Gene3D G3DSA:3.40.50.1240 1 240 4.6E-59 T 13-10-2018 IPR029033 Histidine phosphatase superfamily RPIT_11325 b0a6a323194701dc62160169c2a2d923 245 PIRSF PIRSF000709 144 218 0.0096 T 13-10-2018 RPIT_11325 b0a6a323194701dc62160169c2a2d923 245 PIRSF PIRSF000709 2 112 7.9E-6 T 13-10-2018 RPIT_11325 b0a6a323194701dc62160169c2a2d923 245 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 13-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 RPIT_11325 b0a6a323194701dc62160169c2a2d923 245 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 128 3.0E-19 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RPIT_11325 b0a6a323194701dc62160169c2a2d923 245 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 243 1.0E-55 T 13-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 RPIT_04510 19a3da87d9d672d2e0fcc07696dc1a5b 185 Pfam PF01765 Ribosome recycling factor 21 182 1.5E-59 T 13-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 RPIT_04510 19a3da87d9d672d2e0fcc07696dc1a5b 185 Gene3D G3DSA:1.10.132.20 12 182 4.1E-66 T 13-10-2018 RPIT_04510 19a3da87d9d672d2e0fcc07696dc1a5b 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 25.964 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 RPIT_04510 19a3da87d9d672d2e0fcc07696dc1a5b 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 184 1.7E-62 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 RPIT_04510 19a3da87d9d672d2e0fcc07696dc1a5b 185 SUPERFAMILY SSF55194 1 184 2.62E-65 T 13-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 RPIT_04510 19a3da87d9d672d2e0fcc07696dc1a5b 185 Gene3D G3DSA:3.30.1360.40 31 105 4.1E-66 T 13-10-2018 RPIT_00580 88883b76622b458248919c5b75d51be3 198 SUPERFAMILY SSF51161 2 163 1.57E-39 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily RPIT_00580 88883b76622b458248919c5b75d51be3 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 49 83 2.4E-4 T 13-10-2018 IPR001451 Hexapeptide repeat RPIT_00580 88883b76622b458248919c5b75d51be3 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 47 2.5E-8 T 13-10-2018 IPR001451 Hexapeptide repeat RPIT_00580 88883b76622b458248919c5b75d51be3 198 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 115 142 0.002 T 13-10-2018 IPR001451 Hexapeptide repeat RPIT_00580 88883b76622b458248919c5b75d51be3 198 Gene3D G3DSA:2.160.10.10 1 158 2.0E-40 T 13-10-2018 RPIT_05800 ed85d69df43d91a248cd534beea5a3b2 170 Pfam PF04343 Protein of unknown function, DUF488 12 132 3.8E-30 T 13-10-2018 IPR007438 Protein of unknown function DUF488 RPIT_05800 ed85d69df43d91a248cd534beea5a3b2 170 PIRSF PIRSF024492 1 170 8.4E-63 T 13-10-2018 IPR014519 Uncharacterised conserved protein UCP024492 RPIT_02165 2aa720e9a54a407147a959b149ee5663 257 Gene3D G3DSA:3.40.50.720 9 256 1.2E-67 T 13-10-2018 RPIT_02165 2aa720e9a54a407147a959b149ee5663 257 Pfam PF00899 ThiF family 19 252 1.7E-52 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RPIT_02165 2aa720e9a54a407147a959b149ee5663 257 SUPERFAMILY SSF69572 4 251 4.71E-68 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 RPIT_06935 900c3cd6bb69001bc090d517794c87b3 398 SUPERFAMILY SSF53383 1 396 5.0E-112 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_06935 900c3cd6bb69001bc090d517794c87b3 398 PRINTS PR00799 Aspartate aminotransferase signature 208 220 7.4E-37 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RPIT_06935 900c3cd6bb69001bc090d517794c87b3 398 PRINTS PR00799 Aspartate aminotransferase signature 275 300 7.4E-37 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RPIT_06935 900c3cd6bb69001bc090d517794c87b3 398 PRINTS PR00799 Aspartate aminotransferase signature 177 196 7.4E-37 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RPIT_06935 900c3cd6bb69001bc090d517794c87b3 398 PRINTS PR00799 Aspartate aminotransferase signature 342 360 7.4E-37 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RPIT_06935 900c3cd6bb69001bc090d517794c87b3 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 RPIT_06935 900c3cd6bb69001bc090d517794c87b3 398 Pfam PF00155 Aminotransferase class I and II 29 393 1.2E-77 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIT_06935 900c3cd6bb69001bc090d517794c87b3 398 Gene3D G3DSA:3.40.640.10 62 302 4.1E-155 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_06935 900c3cd6bb69001bc090d517794c87b3 398 Gene3D G3DSA:3.90.1150.10 8 393 4.1E-155 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_05265 ee892e40c2138b2daf0de1da86ecb4dc 363 Pfam PF02371 Transposase IS116/IS110/IS902 family 248 323 1.2E-13 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RPIT_05265 ee892e40c2138b2daf0de1da86ecb4dc 363 Pfam PF01548 Transposase 20 164 1.0E-16 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RPIT_01415 d60b26c80f06447bf1e959710aa5bbb3 209 Pfam PF00482 Type II secretion system (T2SS), protein F 75 197 1.2E-15 T 13-10-2018 IPR018076 Type II secretion system F domain RPIT_02140 da5f656cd7dfdc7a7fa2f3d1ef306482 207 SUPERFAMILY SSF89155 8 166 1.44E-21 T 13-10-2018 IPR036411 TorD-like superfamily RPIT_02140 da5f656cd7dfdc7a7fa2f3d1ef306482 207 Pfam PF02613 Nitrate reductase delta subunit 47 124 5.3E-7 T 13-10-2018 IPR020945 DMSO/Nitrate reductase chaperone RPIT_02140 da5f656cd7dfdc7a7fa2f3d1ef306482 207 Gene3D G3DSA:1.10.3480.10 3 128 5.8E-6 T 13-10-2018 RPIT_02140 da5f656cd7dfdc7a7fa2f3d1ef306482 207 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 14 160 3.6E-26 T 13-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 RPIT_03845 5a77d04d07929f2fd35a66efab10c304 249 Pfam PF13462 Thioredoxin 80 243 8.5E-32 T 13-10-2018 IPR012336 Thioredoxin-like fold RPIT_03845 5a77d04d07929f2fd35a66efab10c304 249 Gene3D G3DSA:3.40.30.10 69 247 3.4E-48 T 13-10-2018 RPIT_03845 5a77d04d07929f2fd35a66efab10c304 249 SUPERFAMILY SSF52833 78 242 2.32E-39 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_08545 cfa6c20e9aab81866baeaeaf3f51c979 122 SUPERFAMILY SSF52980 8 114 2.68E-17 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RPIT_08545 cfa6c20e9aab81866baeaeaf3f51c979 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 5 117 19.581 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 RPIT_08545 cfa6c20e9aab81866baeaeaf3f51c979 122 Gene3D G3DSA:3.40.1350.10 11 121 5.1E-26 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 RPIT_08545 cfa6c20e9aab81866baeaeaf3f51c979 122 Pfam PF02021 Uncharacterised protein family UPF0102 12 103 9.1E-26 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 RPIT_06940 feb78afe092e38343a7cf6e128259faf 378 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 12 296 1.4E-85 T 13-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RPIT_06940 feb78afe092e38343a7cf6e128259faf 378 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 291 7.9E-54 T 13-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RPIT_06940 feb78afe092e38343a7cf6e128259faf 378 SUPERFAMILY SSF55931 3 368 5.98E-96 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 RPIT_06940 feb78afe092e38343a7cf6e128259faf 378 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 378 78.899 T 13-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RPIT_06940 feb78afe092e38343a7cf6e128259faf 378 Gene3D G3DSA:3.30.590.20 2 371 1.1E-98 T 13-10-2018 RPIT_02475 288943bbe723cca5fc44d22b1e63f38c 449 Pfam PF13726 Na+-H+ antiporter family 2 88 3.5E-31 T 13-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal RPIT_02475 288943bbe723cca5fc44d22b1e63f38c 449 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 2.5E-5 T 13-10-2018 RPIT_02475 288943bbe723cca5fc44d22b1e63f38c 449 PRINTS PR00173 Glutamate-aspartate symporter signature 382 401 2.5E-5 T 13-10-2018 RPIT_02475 288943bbe723cca5fc44d22b1e63f38c 449 PRINTS PR00173 Glutamate-aspartate symporter signature 192 214 2.5E-5 T 13-10-2018 RPIT_02475 288943bbe723cca5fc44d22b1e63f38c 449 Pfam PF03553 Na+/H+ antiporter family 153 443 8.7E-64 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 RPIT_04770 7ae51516027fcd084b8da1013dd83867 252 SUPERFAMILY SSF53448 9 242 1.8E-38 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_04770 7ae51516027fcd084b8da1013dd83867 252 Pfam PF12804 MobA-like NTP transferase domain 9 122 4.3E-14 T 13-10-2018 IPR025877 MobA-like NTP transferase RPIT_04770 7ae51516027fcd084b8da1013dd83867 252 Gene3D G3DSA:3.90.550.10 8 206 4.5E-32 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_08580 a1d11538c535efdef2c781824f32669f 228 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 4 226 4.4E-54 T 13-10-2018 IPR011138 Succinate dehydrogenase cytochrome b558 subunit RPIT_08580 a1d11538c535efdef2c781824f32669f 228 SUPERFAMILY SSF81343 2 228 4.84E-45 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RPIT_08580 a1d11538c535efdef2c781824f32669f 228 Gene3D G3DSA:1.20.1300.10 1 227 1.1E-47 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RPIT_09450 600145c9aa9677f26ccfa3a9ff537ae3 145 Pfam PF01230 HIT domain 18 108 2.0E-20 T 13-10-2018 IPR001310 Histidine triad (HIT) protein RPIT_09450 600145c9aa9677f26ccfa3a9ff537ae3 145 PRINTS PR00332 Histidine triad family signature 29 47 4.3E-5 T 13-10-2018 IPR001310 Histidine triad (HIT) protein RPIT_09450 600145c9aa9677f26ccfa3a9ff537ae3 145 PRINTS PR00332 Histidine triad family signature 96 106 4.3E-5 T 13-10-2018 IPR001310 Histidine triad (HIT) protein RPIT_09450 600145c9aa9677f26ccfa3a9ff537ae3 145 SUPERFAMILY SSF54197 4 118 3.4E-37 T 13-10-2018 IPR036265 HIT-like superfamily RPIT_09450 600145c9aa9677f26ccfa3a9ff537ae3 145 Gene3D G3DSA:3.30.428.10 1 144 5.0E-42 T 13-10-2018 IPR036265 HIT-like superfamily RPIT_07935 37a544e8a7bf9bc5e42442f3644f263b 267 Gene3D G3DSA:3.90.850.10 41 267 3.1E-82 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 RPIT_07935 37a544e8a7bf9bc5e42442f3644f263b 267 Pfam PF10370 Domain of unknown function (DUF2437) 1 61 8.5E-16 T 13-10-2018 IPR018833 Domain of unknown function DUF2437 RPIT_07935 37a544e8a7bf9bc5e42442f3644f263b 267 SUPERFAMILY SSF56529 59 264 4.45E-77 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 RPIT_07935 37a544e8a7bf9bc5e42442f3644f263b 267 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 67 264 6.5E-68 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 RPIT_06400 f98acc9df5669c242aa3f055bbecf0fd 572 SUPERFAMILY SSF161098 20 271 1.21E-50 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_06400 f98acc9df5669c242aa3f055bbecf0fd 572 Gene3D G3DSA:1.10.3720.10 297 562 2.2E-42 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_06400 f98acc9df5669c242aa3f055bbecf0fd 572 Gene3D G3DSA:1.10.3720.10 19 281 1.2E-59 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_06400 f98acc9df5669c242aa3f055bbecf0fd 572 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 366 551 9.3E-8 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_06400 f98acc9df5669c242aa3f055bbecf0fd 572 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 274 1.2E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_06400 f98acc9df5669c242aa3f055bbecf0fd 572 SUPERFAMILY SSF161098 300 556 2.15E-39 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_02565 e4c9a6acd3480e35b0681f3521b67560 83 Pfam PF13396 Phospholipase_D-nuclease N-terminal 13 57 5.2E-9 T 13-10-2018 IPR027379 Cardiolipin synthase N-terminal RPIT_10390 306f82f5889632d0d023bb7a04fdc0e8 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 252 1.3E-46 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 RPIT_10390 306f82f5889632d0d023bb7a04fdc0e8 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 RPIT_10390 306f82f5889632d0d023bb7a04fdc0e8 261 Gene3D G3DSA:3.90.226.10 2 257 1.7E-68 T 13-10-2018 RPIT_10390 306f82f5889632d0d023bb7a04fdc0e8 261 SUPERFAMILY SSF52096 3 254 2.2E-65 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily RPIT_00595 3c30e6c49b760ee71a627deb742e97b5 389 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 235 244 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 RPIT_00595 3c30e6c49b760ee71a627deb742e97b5 389 Gene3D G3DSA:3.40.640.10 50 290 7.4E-130 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_00595 3c30e6c49b760ee71a627deb742e97b5 389 Pfam PF00155 Aminotransferase class I and II 35 380 1.7E-70 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIT_00595 3c30e6c49b760ee71a627deb742e97b5 389 Gene3D G3DSA:3.90.1150.10 31 381 7.4E-130 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_00595 3c30e6c49b760ee71a627deb742e97b5 389 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 2 383 1.4E-183 T 13-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 RPIT_00595 3c30e6c49b760ee71a627deb742e97b5 389 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 1 389 50.091 T 13-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 RPIT_00595 3c30e6c49b760ee71a627deb742e97b5 389 SUPERFAMILY SSF53383 2 385 1.45E-117 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_05790 26a13b510e58833c999f9b24e38898ea 243 Pfam PF02585 GlcNAc-PI de-N-acetylase 17 143 1.8E-24 T 13-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 RPIT_05790 26a13b510e58833c999f9b24e38898ea 243 Gene3D G3DSA:3.40.50.10320 1 237 1.7E-64 T 13-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 RPIT_05790 26a13b510e58833c999f9b24e38898ea 243 SUPERFAMILY SSF102588 14 231 7.72E-40 T 13-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 RPIT_07515 acf5da21eab9eaca8d35ff2da4f2777f 398 Pfam PF01548 Transposase 10 164 9.5E-41 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RPIT_07515 acf5da21eab9eaca8d35ff2da4f2777f 398 Pfam PF02371 Transposase IS116/IS110/IS902 family 272 355 1.3E-25 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RPIT_11130 c2a582d3069b95d367c59c810c5fa231 322 SUPERFAMILY SSF63829 25 259 1.61E-14 T 13-10-2018 RPIT_09645 8172d6e1239ef196086ba22b97d45a5d 165 Pfam PF03703 Bacterial PH domain 77 152 3.5E-21 T 13-10-2018 IPR005182 Domain of unknown function DUF304 RPIT_01050 c30d76fad106b05d68db31a0c727f2a8 309 SMART SM00382 26 204 8.6E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_01050 c30d76fad106b05d68db31a0c727f2a8 309 SUPERFAMILY SSF52540 2 219 1.03E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01050 c30d76fad106b05d68db31a0c727f2a8 309 Gene3D G3DSA:3.40.50.300 1 263 4.3E-58 T 13-10-2018 RPIT_01050 c30d76fad106b05d68db31a0c727f2a8 309 Pfam PF00005 ABC transporter 18 156 2.3E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_03755 7db52b26a64efa65e9133369a92d9845 459 SUPERFAMILY SSF52833 195 286 3.86E-5 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_03755 7db52b26a64efa65e9133369a92d9845 459 Pfam PF07291 Methylamine utilisation protein MauE 4 155 2.6E-5 T 13-10-2018 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 RPIT_03290 0f1a457a077a5569278a383895464608 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 322 6.7E-56 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 RPIT_13960 81ba27732a5de73016e281cf9d912070 90 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 22 85 2.0E-5 T 13-10-2018 IPR008792 Coenzyme PQQ synthesis D RPIT_08615 feae34b8caaa53ecc375866c8bb85652 358 Gene3D G3DSA:3.20.20.140 48 318 8.8E-47 T 13-10-2018 RPIT_08615 feae34b8caaa53ecc375866c8bb85652 358 SUPERFAMILY SSF51338 21 357 4.54E-5 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 RPIT_08615 feae34b8caaa53ecc375866c8bb85652 358 Gene3D G3DSA:2.30.40.10 33 348 8.8E-47 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 RPIT_08615 feae34b8caaa53ecc375866c8bb85652 358 SUPERFAMILY SSF51556 46 317 1.05E-49 T 13-10-2018 IPR032466 Metal-dependent hydrolase RPIT_08615 feae34b8caaa53ecc375866c8bb85652 358 Pfam PF01979 Amidohydrolase family 42 335 2.9E-13 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 RPIT_02785 0e27352b1b7976ba3a83c45014d762b9 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 227 6.8E-74 T 13-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 RPIT_02785 0e27352b1b7976ba3a83c45014d762b9 236 Gene3D G3DSA:3.40.50.1580 1 235 7.7E-62 T 13-10-2018 RPIT_02785 0e27352b1b7976ba3a83c45014d762b9 236 Pfam PF01048 Phosphorylase superfamily 16 228 8.1E-36 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RPIT_02785 0e27352b1b7976ba3a83c45014d762b9 236 SUPERFAMILY SSF53167 3 230 1.17E-71 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 RPIT_00200 4fc27fac48bbdef883e78346d1181e0c 602 Pfam PF00128 Alpha amylase, catalytic domain 173 484 8.3E-53 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_00200 4fc27fac48bbdef883e78346d1181e0c 602 SUPERFAMILY SSF81296 8 111 4.2E-11 T 13-10-2018 IPR014756 Immunoglobulin E-set RPIT_00200 4fc27fac48bbdef883e78346d1181e0c 602 Gene3D G3DSA:2.60.40.10 4 116 7.2E-14 T 13-10-2018 IPR013783 Immunoglobulin-like fold RPIT_00200 4fc27fac48bbdef883e78346d1181e0c 602 Gene3D G3DSA:3.20.20.80 117 518 1.2E-102 T 13-10-2018 RPIT_00200 4fc27fac48bbdef883e78346d1181e0c 602 SMART SM00642 129 516 1.9E-72 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_00200 4fc27fac48bbdef883e78346d1181e0c 602 SUPERFAMILY SSF51445 113 525 2.9E-75 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_12345 6a2ca3b6e914d9a7d62caefc50511268 358 Pfam PF08239 Bacterial SH3 domain 153 203 4.9E-8 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type RPIT_12345 6a2ca3b6e914d9a7d62caefc50511268 358 SMART SM00287 144 207 1.5E-4 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type RPIT_12345 6a2ca3b6e914d9a7d62caefc50511268 358 Gene3D G3DSA:2.30.30.40 149 204 1.0E-11 T 13-10-2018 RPIT_12345 6a2ca3b6e914d9a7d62caefc50511268 358 PRINTS PR01217 Proline rich extensin signature 52 64 7.9E-9 T 13-10-2018 RPIT_12345 6a2ca3b6e914d9a7d62caefc50511268 358 PRINTS PR01217 Proline rich extensin signature 116 132 7.9E-9 T 13-10-2018 RPIT_12345 6a2ca3b6e914d9a7d62caefc50511268 358 PRINTS PR01217 Proline rich extensin signature 95 116 7.9E-9 T 13-10-2018 RPIT_12345 6a2ca3b6e914d9a7d62caefc50511268 358 PRINTS PR01217 Proline rich extensin signature 66 82 7.9E-9 T 13-10-2018 RPIT_09075 b3662d287f7459b9881b5eebeb06b6c2 348 Gene3D G3DSA:3.40.50.1820 90 337 6.0E-27 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_09075 b3662d287f7459b9881b5eebeb06b6c2 348 SUPERFAMILY SSF53474 84 335 5.36E-31 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_11600 d3e04843a1ccdcc5fb0f363568d1ed62 216 Pfam PF04203 Sortase family 79 193 9.1E-21 T 13-10-2018 IPR005754 Sortase family RPIT_11600 d3e04843a1ccdcc5fb0f363568d1ed62 216 SUPERFAMILY SSF63817 69 192 8.11E-20 T 13-10-2018 IPR023365 Sortase domain superfamily RPIT_11600 d3e04843a1ccdcc5fb0f363568d1ed62 216 Gene3D G3DSA:2.40.260.10 25 204 1.5E-34 T 13-10-2018 IPR023365 Sortase domain superfamily RPIT_11600 d3e04843a1ccdcc5fb0f363568d1ed62 216 TIGRFAM TIGR01076 sortase_fam: sortase 79 159 1.7E-11 T 13-10-2018 IPR005754 Sortase family RPIT_04075 32065751f60a38e67bd72c4cfc509c8c 306 SUPERFAMILY SSF55174 8 103 1.81E-6 T 13-10-2018 RPIT_04075 32065751f60a38e67bd72c4cfc509c8c 306 Gene3D G3DSA:3.30.2350.10 80 305 6.7E-70 T 13-10-2018 RPIT_04075 32065751f60a38e67bd72c4cfc509c8c 306 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 11 303 2.0E-82 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIT_04075 32065751f60a38e67bd72c4cfc509c8c 306 SUPERFAMILY SSF55120 76 303 1.73E-69 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIT_04075 32065751f60a38e67bd72c4cfc509c8c 306 Gene3D G3DSA:3.10.290.10 2 66 1.7E-11 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 RPIT_04075 32065751f60a38e67bd72c4cfc509c8c 306 Pfam PF00849 RNA pseudouridylate synthase 88 242 4.8E-32 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIT_04075 32065751f60a38e67bd72c4cfc509c8c 306 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIT_00705 3fa67c1c8dfdfdc0ccd61554b0516d13 353 SUPERFAMILY SSF55729 35 341 5.12E-15 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_00705 3fa67c1c8dfdfdc0ccd61554b0516d13 353 Pfam PF00583 Acetyltransferase (GNAT) family 29 107 5.8E-7 T 13-10-2018 IPR000182 GNAT domain RPIT_00705 3fa67c1c8dfdfdc0ccd61554b0516d13 353 Gene3D G3DSA:3.40.630.30 3 350 1.0E-72 T 13-10-2018 RPIT_03595 dd761f267dda23f0efe9166bc8d28140 501 SUPERFAMILY SSF52949 41 163 5.06E-13 T 13-10-2018 RPIT_03595 dd761f267dda23f0efe9166bc8d28140 501 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 6 501 31.835 T 13-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 RPIT_03595 dd761f267dda23f0efe9166bc8d28140 501 Gene3D G3DSA:3.40.630.10 167 500 2.8E-127 T 13-10-2018 RPIT_03595 dd761f267dda23f0efe9166bc8d28140 501 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 493 2.0E-115 T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RPIT_03595 dd761f267dda23f0efe9166bc8d28140 501 Gene3D G3DSA:3.40.220.10 34 163 1.2E-8 T 13-10-2018 RPIT_03595 dd761f267dda23f0efe9166bc8d28140 501 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 42 145 3.5E-13 T 13-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RPIT_03595 dd761f267dda23f0efe9166bc8d28140 501 SUPERFAMILY SSF53187 181 495 4.08E-107 T 13-10-2018 RPIT_03595 dd761f267dda23f0efe9166bc8d28140 501 PRINTS PR00481 Cytosol aminopeptidase signature 342 362 1.5E-49 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RPIT_03595 dd761f267dda23f0efe9166bc8d28140 501 PRINTS PR00481 Cytosol aminopeptidase signature 320 341 1.5E-49 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RPIT_03595 dd761f267dda23f0efe9166bc8d28140 501 PRINTS PR00481 Cytosol aminopeptidase signature 261 278 1.5E-49 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RPIT_03595 dd761f267dda23f0efe9166bc8d28140 501 PRINTS PR00481 Cytosol aminopeptidase signature 283 304 1.5E-49 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RPIT_03595 dd761f267dda23f0efe9166bc8d28140 501 PRINTS PR00481 Cytosol aminopeptidase signature 370 385 1.5E-49 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RPIT_03595 dd761f267dda23f0efe9166bc8d28140 501 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 346 353 - T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RPIT_13945 0a49b382efdae354c1d6b5fe845da31e 486 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 237 436 3.3E-53 T 13-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 RPIT_13945 0a49b382efdae354c1d6b5fe845da31e 486 SUPERFAMILY SSF52540 255 429 1.19E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_13945 0a49b382efdae354c1d6b5fe845da31e 486 Gene3D G3DSA:3.40.50.300 187 452 1.4E-71 T 13-10-2018 RPIT_13945 0a49b382efdae354c1d6b5fe845da31e 486 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 258 430 2.4E-9 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RPIT_12040 63bc9e4380de323dcd9a233ac2231230 253 SUPERFAMILY SSF53187 7 248 8.48E-21 T 13-10-2018 RPIT_12040 63bc9e4380de323dcd9a233ac2231230 253 Pfam PF05013 N-formylglutamate amidohydrolase 13 219 1.1E-28 T 13-10-2018 IPR007709 N-formylglutamate amidohydrolase RPIT_12040 63bc9e4380de323dcd9a233ac2231230 253 Gene3D G3DSA:3.40.630.40 7 247 5.2E-12 T 13-10-2018 RPIT_06460 613c0f6a07d78e5e318d59b93ccc7cb2 104 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 47 96 2.0E-18 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 RPIT_06460 613c0f6a07d78e5e318d59b93ccc7cb2 104 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 1 101 30.89 T 13-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 RPIT_06460 613c0f6a07d78e5e318d59b93ccc7cb2 104 Gene3D G3DSA:3.10.20.400 2 88 3.5E-41 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 RPIT_06460 613c0f6a07d78e5e318d59b93ccc7cb2 104 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 24 97 3.0E-35 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 RPIT_06460 613c0f6a07d78e5e318d59b93ccc7cb2 104 SUPERFAMILY SSF141734 3 101 8.24E-49 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 RPIT_14360 266143b5669f84ef293bccd744d7e1db 306 Gene3D G3DSA:3.40.1190.20 1 303 4.5E-60 T 13-10-2018 IPR029056 Ribokinase-like RPIT_14360 266143b5669f84ef293bccd744d7e1db 306 Pfam PF00294 pfkB family carbohydrate kinase 27 289 1.2E-30 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB RPIT_14360 266143b5669f84ef293bccd744d7e1db 306 PIRSF PIRSF000535 1 303 1.6E-46 T 13-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 RPIT_14360 266143b5669f84ef293bccd744d7e1db 306 SUPERFAMILY SSF53613 1 291 8.42E-43 T 13-10-2018 IPR029056 Ribokinase-like RPIT_06540 65953a7a29e63ac53d8a608d018167a3 370 PIRSF PIRSF005572 2 364 1.6E-98 T 13-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 RPIT_06540 65953a7a29e63ac53d8a608d018167a3 370 Gene3D G3DSA:3.90.1150.10 6 356 1.4E-111 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_06540 65953a7a29e63ac53d8a608d018167a3 370 Gene3D G3DSA:3.40.640.10 16 250 1.4E-111 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_06540 65953a7a29e63ac53d8a608d018167a3 370 SUPERFAMILY SSF53383 6 362 9.68E-82 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_06540 65953a7a29e63ac53d8a608d018167a3 370 Pfam PF00266 Aminotransferase class-V 6 357 2.0E-56 T 13-10-2018 IPR000192 Aminotransferase class V domain RPIT_12285 40b58995b924b8e509d11e6919cd1cd9 242 SUPERFAMILY SSF51695 3 237 2.49E-75 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 RPIT_12285 40b58995b924b8e509d11e6919cd1cd9 242 Gene3D G3DSA:3.20.20.190 1 240 1.1E-81 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 RPIT_12285 40b58995b924b8e509d11e6919cd1cd9 242 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 232 3.4E-45 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RPIT_11180 2274fc1c9294227b92accb48a59e5bea 172 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RPIT_11180 2274fc1c9294227b92accb48a59e5bea 172 SUPERFAMILY SSF55811 14 151 1.76E-19 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 RPIT_11180 2274fc1c9294227b92accb48a59e5bea 172 Gene3D G3DSA:3.90.79.10 9 146 5.6E-20 T 13-10-2018 RPIT_11180 2274fc1c9294227b92accb48a59e5bea 172 Pfam PF00293 NUDIX domain 14 140 1.4E-16 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 RPIT_11180 2274fc1c9294227b92accb48a59e5bea 172 PRINTS PR00502 NUDIX hydrolase family signature 43 57 3.3E-5 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RPIT_11180 2274fc1c9294227b92accb48a59e5bea 172 PRINTS PR00502 NUDIX hydrolase family signature 57 72 3.3E-5 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RPIT_02625 8ffa690ddce0793aaa37b106b75cab2c 428 SUPERFAMILY SSF51905 11 402 5.56E-46 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_02625 8ffa690ddce0793aaa37b106b75cab2c 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 313 1.0E-13 T 13-10-2018 RPIT_02625 8ffa690ddce0793aaa37b106b75cab2c 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 15 37 1.0E-13 T 13-10-2018 RPIT_02625 8ffa690ddce0793aaa37b106b75cab2c 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 161 176 1.0E-13 T 13-10-2018 RPIT_02625 8ffa690ddce0793aaa37b106b75cab2c 428 Pfam PF01494 FAD binding domain 13 338 6.8E-18 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 RPIT_02625 8ffa690ddce0793aaa37b106b75cab2c 428 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 15 333 1.6E-69 T 13-10-2018 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 RPIT_02625 8ffa690ddce0793aaa37b106b75cab2c 428 Gene3D G3DSA:3.50.50.60 10 407 1.5E-85 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_08700 b20b40f475ca510581dd44def9c43d68 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 59 4.1E-15 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIT_08700 b20b40f475ca510581dd44def9c43d68 164 Pfam PF01467 Cytidylyltransferase-like 4 131 3.4E-17 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIT_08700 b20b40f475ca510581dd44def9c43d68 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 48 72 5.3E-41 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 RPIT_08700 b20b40f475ca510581dd44def9c43d68 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 84 100 5.3E-41 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 RPIT_08700 b20b40f475ca510581dd44def9c43d68 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 19 40 5.3E-41 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 RPIT_08700 b20b40f475ca510581dd44def9c43d68 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 110 132 5.3E-41 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 RPIT_08700 b20b40f475ca510581dd44def9c43d68 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 1 19 5.3E-41 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 RPIT_08700 b20b40f475ca510581dd44def9c43d68 164 SUPERFAMILY SSF52374 2 151 5.36E-41 T 13-10-2018 RPIT_08700 b20b40f475ca510581dd44def9c43d68 164 Gene3D G3DSA:3.40.50.620 1 158 3.7E-49 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_08700 b20b40f475ca510581dd44def9c43d68 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 153 1.9E-51 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 RPIT_08700 b20b40f475ca510581dd44def9c43d68 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 1 156 30.299 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 RPIT_10235 dc2525abbe77ac4134d3251dc3c7655e 514 Gene3D G3DSA:3.90.226.10 258 514 1.5E-83 T 13-10-2018 RPIT_10235 dc2525abbe77ac4134d3251dc3c7655e 514 SUPERFAMILY SSF52096 2 248 3.02E-76 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily RPIT_10235 dc2525abbe77ac4134d3251dc3c7655e 514 SUPERFAMILY SSF52096 241 513 1.81E-81 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily RPIT_10235 dc2525abbe77ac4134d3251dc3c7655e 514 Gene3D G3DSA:3.90.226.10 1 256 1.4E-93 T 13-10-2018 RPIT_10235 dc2525abbe77ac4134d3251dc3c7655e 514 Pfam PF01039 Carboxyl transferase domain 27 511 5.0E-177 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 RPIT_03960 630e86af33a0d7f63d1e44430f05a6ca 130 Pfam PF11239 Protein of unknown function (DUF3040) 1 79 6.5E-22 T 13-10-2018 IPR021401 Protein of unknown function DUF3040 RPIT_07230 97b208ae84c7935d52b55c3817be322d 519 SUPERFAMILY SSF56524 219 415 1.29E-56 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 RPIT_07230 97b208ae84c7935d52b55c3817be322d 519 Gene3D G3DSA:2.60.40.650 413 518 7.0E-21 T 13-10-2018 RPIT_07230 97b208ae84c7935d52b55c3817be322d 519 Pfam PF00174 Oxidoreductase molybdopterin binding domain 246 397 7.0E-42 T 13-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 RPIT_07230 97b208ae84c7935d52b55c3817be322d 519 SUPERFAMILY SSF81296 408 518 2.03E-21 T 13-10-2018 IPR014756 Immunoglobulin E-set RPIT_07230 97b208ae84c7935d52b55c3817be322d 519 Gene3D G3DSA:3.90.420.10 200 412 1.6E-51 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 RPIT_06295 733bcd4d85f6a725da316d7d53a54466 359 Pfam PF07885 Ion channel 38 118 3.7E-11 T 13-10-2018 IPR013099 Potassium channel domain RPIT_06295 733bcd4d85f6a725da316d7d53a54466 359 Gene3D G3DSA:3.40.50.720 133 270 6.4E-35 T 13-10-2018 RPIT_06295 733bcd4d85f6a725da316d7d53a54466 359 Pfam PF02254 TrkA-N domain 139 256 3.7E-27 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RPIT_06295 733bcd4d85f6a725da316d7d53a54466 359 SUPERFAMILY SSF51735 135 274 7.88E-28 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_06295 733bcd4d85f6a725da316d7d53a54466 359 Gene3D G3DSA:1.10.287.70 26 132 1.3E-12 T 13-10-2018 RPIT_06295 733bcd4d85f6a725da316d7d53a54466 359 SUPERFAMILY SSF81324 26 162 3.92E-19 T 13-10-2018 RPIT_05880 32909f2e97bad65f4df4ffc21d4061d8 377 SUPERFAMILY SSF55874 280 365 4.14E-6 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_05880 32909f2e97bad65f4df4ffc21d4061d8 377 Pfam PF07730 Histidine kinase 177 242 2.0E-16 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RPIT_05880 32909f2e97bad65f4df4ffc21d4061d8 377 Gene3D G3DSA:3.30.565.10 252 374 8.5E-19 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RPIT_08740 164963a8926f3b9edf2b87cd0a0be779 394 Pfam PF07690 Major Facilitator Superfamily 28 345 1.8E-20 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIT_08740 164963a8926f3b9edf2b87cd0a0be779 394 Gene3D G3DSA:1.20.1250.20 2 386 2.5E-28 T 13-10-2018 RPIT_08740 164963a8926f3b9edf2b87cd0a0be779 394 SUPERFAMILY SSF103473 5 383 5.36E-37 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_06765 3fcf5b8765bc915bcac56585ee2ead82 425 Pfam PF09594 Glycosyltransferase family 87 89 314 7.2E-8 T 13-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 RPIT_13410 f43e1fd1ac11cd4e96404eb927f381ec 217 SUPERFAMILY SSF52317 17 216 2.24E-20 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_13410 f43e1fd1ac11cd4e96404eb927f381ec 217 Gene3D G3DSA:3.40.50.880 1 217 2.7E-21 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_13410 f43e1fd1ac11cd4e96404eb927f381ec 217 Pfam PF06283 Trehalose utilisation 17 214 2.6E-16 T 13-10-2018 IPR029010 ThuA-like domain RPIT_13915 58cd7096ffd2d109fa24cda0a882b80f 117 SUPERFAMILY SSF53448 4 116 1.13E-42 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_13915 58cd7096ffd2d109fa24cda0a882b80f 117 Gene3D G3DSA:3.90.550.10 1 116 2.9E-48 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_13915 58cd7096ffd2d109fa24cda0a882b80f 117 Pfam PF00535 Glycosyl transferase family 2 7 117 7.0E-35 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RPIT_03250 4de326c87e4f1ae9eee7c1c23e7343b8 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 261 2.2E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_03250 4de326c87e4f1ae9eee7c1c23e7343b8 269 Gene3D G3DSA:1.10.3720.10 3 256 5.5E-53 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_03250 4de326c87e4f1ae9eee7c1c23e7343b8 269 SUPERFAMILY SSF161098 8 268 9.55E-61 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_10525 450b0ea8657ed3ddd2483c954ce6f545 94 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 22 64 1.0E-13 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RPIT_10525 450b0ea8657ed3ddd2483c954ce6f545 94 Pfam PF02609 Exonuclease VII small subunit 25 75 1.6E-16 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RPIT_10525 450b0ea8657ed3ddd2483c954ce6f545 94 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 24 84 13.25 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RPIT_10525 450b0ea8657ed3ddd2483c954ce6f545 94 PIRSF PIRSF006488 13 94 3.3E-21 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RPIT_10525 450b0ea8657ed3ddd2483c954ce6f545 94 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 24 76 7.3E-19 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RPIT_10525 450b0ea8657ed3ddd2483c954ce6f545 94 Gene3D G3DSA:1.10.287.1040 19 92 1.5E-14 T 13-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 RPIT_10525 450b0ea8657ed3ddd2483c954ce6f545 94 SUPERFAMILY SSF116842 18 78 9.68E-17 T 13-10-2018 RPIT_14295 7f4c599e046ddc93c70dd4aefc558f2c 437 Gene3D G3DSA:1.20.1250.20 44 227 1.9E-7 T 13-10-2018 RPIT_14295 7f4c599e046ddc93c70dd4aefc558f2c 437 Gene3D G3DSA:1.20.1250.20 252 436 3.3E-8 T 13-10-2018 RPIT_14295 7f4c599e046ddc93c70dd4aefc558f2c 437 SUPERFAMILY SSF103473 54 431 6.15E-24 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_14295 7f4c599e046ddc93c70dd4aefc558f2c 437 Pfam PF07690 Major Facilitator Superfamily 53 271 2.0E-10 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIT_02255 7047d2da3972d174c38d95c1925b95a1 1626 Pfam PF05593 RHS Repeat 1148 1193 8.0E-5 T 13-10-2018 IPR031325 RHS repeat RPIT_02255 7047d2da3972d174c38d95c1925b95a1 1626 Pfam PF05593 RHS Repeat 992 1022 5.5E-5 T 13-10-2018 IPR031325 RHS repeat RPIT_02255 7047d2da3972d174c38d95c1925b95a1 1626 ProSitePatterns PS00018 EF-hand calcium-binding domain. 854 866 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site RPIT_07650 ced9ba3b56dad119c86a1d54353087b6 76 SUPERFAMILY SSF47598 3 52 3.45E-8 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 RPIT_11545 933d4491ecb9e234181b59f3eaa7c92c 114 Pfam PF13701 Transposase DDE domain group 1 3 109 3.8E-18 T 13-10-2018 IPR025668 Transposase DDE domain RPIT_04145 a73f183b7537ba9f73e79edfdcd7a385 89 SUPERFAMILY SSF103473 4 86 1.06E-5 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_09415 a701dd59d32944df11e7f3c94ae8d5b0 210 Gene3D G3DSA:3.30.230.30 3 129 2.9E-52 T 13-10-2018 IPR036956 Impact, N-terminal domain superfamily RPIT_09415 a701dd59d32944df11e7f3c94ae8d5b0 210 SUPERFAMILY SSF54211 10 127 3.0E-40 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RPIT_09415 a701dd59d32944df11e7f3c94ae8d5b0 210 Pfam PF01205 Uncharacterized protein family UPF0029 16 121 8.0E-30 T 13-10-2018 IPR001498 Impact, N-terminal RPIT_09415 a701dd59d32944df11e7f3c94ae8d5b0 210 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 76 105 - T 13-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site RPIT_00690 6ee241d262bdfe5fd4e47c575efa9b41 297 SUPERFAMILY SSF49785 46 168 1.28E-17 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_00690 6ee241d262bdfe5fd4e47c575efa9b41 297 Pfam PF00754 F5/8 type C domain 49 164 9.2E-10 T 13-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain RPIT_00690 6ee241d262bdfe5fd4e47c575efa9b41 297 Gene3D G3DSA:2.60.120.260 21 189 4.5E-29 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_07025 5609ac639fb8ac8d7e08e4d23d55f99e 171 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 151 71.938 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RPIT_07025 5609ac639fb8ac8d7e08e4d23d55f99e 171 Pfam PF03477 ATP cone domain 47 131 1.2E-13 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 RPIT_07025 5609ac639fb8ac8d7e08e4d23d55f99e 171 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 144 5.0E-47 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RPIT_13440 71ef62abeb63e45d4188d712443e9ad6 240 SUPERFAMILY SSF52540 48 206 5.62E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_13440 71ef62abeb63e45d4188d712443e9ad6 240 Gene3D G3DSA:3.40.50.300 33 218 2.0E-20 T 13-10-2018 RPIT_09285 71ef62abeb63e45d4188d712443e9ad6 240 SUPERFAMILY SSF52540 48 206 5.62E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_09285 71ef62abeb63e45d4188d712443e9ad6 240 Gene3D G3DSA:3.40.50.300 33 218 2.0E-20 T 13-10-2018 RPIT_03475 430c4babf46378f045502a20c92ea20d 803 Pfam PF14403 Circularly permuted ATP-grasp type 2 57 433 1.9E-125 T 13-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 RPIT_03475 430c4babf46378f045502a20c92ea20d 803 Gene3D G3DSA:3.40.50.11290 195 291 5.5E-27 T 13-10-2018 RPIT_03475 430c4babf46378f045502a20c92ea20d 803 SUPERFAMILY SSF56059 28 432 1.69E-23 T 13-10-2018 RPIT_03475 430c4babf46378f045502a20c92ea20d 803 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 481 783 4.2E-48 T 13-10-2018 IPR007296 Domain of unknown function DUF403 RPIT_01595 504f08a1e28d706e07ef79613e6f0f71 294 SUPERFAMILY SSF51717 12 284 6.15E-79 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_01595 504f08a1e28d706e07ef79613e6f0f71 294 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 25 281 4.3E-77 T 13-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 RPIT_01595 504f08a1e28d706e07ef79613e6f0f71 294 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 25 40 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_01595 504f08a1e28d706e07ef79613e6f0f71 294 Gene3D G3DSA:3.20.20.20 14 293 1.7E-83 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_01595 504f08a1e28d706e07ef79613e6f0f71 294 Pfam PF00809 Pterin binding enzyme 26 266 6.4E-65 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RPIT_01410 0c29126ef401eb496124682c90d6338a 252 Pfam PF00482 Type II secretion system (T2SS), protein F 88 206 9.1E-6 T 13-10-2018 IPR018076 Type II secretion system F domain RPIT_08235 5598b79613584289894ae37caeeb7e5e 351 Pfam PF02016 LD-carboxypeptidase 19 339 1.1E-54 T 13-10-2018 IPR003507 Peptidase family S66 RPIT_08235 5598b79613584289894ae37caeeb7e5e 351 Gene3D G3DSA:3.50.30.60 172 349 5.5E-35 T 13-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily RPIT_08235 5598b79613584289894ae37caeeb7e5e 351 SUPERFAMILY SSF141986 193 341 4.32E-13 T 13-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily RPIT_08235 5598b79613584289894ae37caeeb7e5e 351 Gene3D G3DSA:3.40.50.10740 6 163 3.3E-35 T 13-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal RPIT_08235 5598b79613584289894ae37caeeb7e5e 351 SUPERFAMILY SSF52317 9 163 4.58E-29 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_09725 ba528f961c952e8a76a844a534c330f5 202 Gene3D G3DSA:3.40.50.300 3 178 9.0E-27 T 13-10-2018 RPIT_09725 ba528f961c952e8a76a844a534c330f5 202 SUPERFAMILY SSF52540 3 147 2.77E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_09725 ba528f961c952e8a76a844a534c330f5 202 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 8 151 4.7E-7 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 RPIT_09725 ba528f961c952e8a76a844a534c330f5 202 PRINTS PR00988 Uridine kinase signature 137 147 3.0E-8 T 13-10-2018 RPIT_09725 ba528f961c952e8a76a844a534c330f5 202 PRINTS PR00988 Uridine kinase signature 77 92 3.0E-8 T 13-10-2018 RPIT_09725 ba528f961c952e8a76a844a534c330f5 202 PRINTS PR00988 Uridine kinase signature 3 20 3.0E-8 T 13-10-2018 RPIT_09725 ba528f961c952e8a76a844a534c330f5 202 PRINTS PR00988 Uridine kinase signature 30 41 3.0E-8 T 13-10-2018 RPIT_07790 ed7b4483f0c84fc48d387fef54fbb63c 270 Pfam PF05593 RHS Repeat 226 261 6.9E-7 T 13-10-2018 IPR031325 RHS repeat RPIT_07790 ed7b4483f0c84fc48d387fef54fbb63c 270 Pfam PF05593 RHS Repeat 186 219 2.4E-5 T 13-10-2018 IPR031325 RHS repeat RPIT_07790 ed7b4483f0c84fc48d387fef54fbb63c 270 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 206 242 0.0016 T 13-10-2018 IPR006530 YD repeat RPIT_07790 ed7b4483f0c84fc48d387fef54fbb63c 270 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 166 205 1.9E-8 T 13-10-2018 IPR006530 YD repeat RPIT_07790 ed7b4483f0c84fc48d387fef54fbb63c 270 Gene3D G3DSA:3.90.930.1 108 264 5.0E-8 T 13-10-2018 RPIT_07790 ed7b4483f0c84fc48d387fef54fbb63c 270 Pfam PF05524 PEP-utilising enzyme, N-terminal 18 79 5.7E-5 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RPIT_12920 6c3f6b5cc419aff74dd6856e25bb0eeb 493 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 472 2.1E-163 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 RPIT_12920 6c3f6b5cc419aff74dd6856e25bb0eeb 493 PIRSF PIRSF006446 1 487 1.1E-137 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 RPIT_07510 9a237b9a87aabe441f4c52bf8990eab4 214 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 11 207 1.0E-38 T 13-10-2018 IPR012808 Conserved hypothetical protein CHP02453 RPIT_07510 9a237b9a87aabe441f4c52bf8990eab4 214 Pfam PF09365 Conserved hypothetical protein (DUF2461) 11 204 2.6E-44 T 13-10-2018 IPR012808 Conserved hypothetical protein CHP02453 RPIT_07510 9a237b9a87aabe441f4c52bf8990eab4 214 PIRSF PIRSF028451 3 213 5.0E-34 T 13-10-2018 IPR015996 Uncharacterised conserved protein UCP028451 RPIT_08880 86a1b2fabb2cd808481d95ce098ae5d5 339 Hamap MF_00313 Glutaminase [glsA]. 23 323 36.432 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 RPIT_08880 86a1b2fabb2cd808481d95ce098ae5d5 339 Gene3D G3DSA:3.40.710.10 21 325 1.3E-109 T 13-10-2018 RPIT_08880 86a1b2fabb2cd808481d95ce098ae5d5 339 SUPERFAMILY SSF56601 23 324 5.51E-97 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like RPIT_08880 86a1b2fabb2cd808481d95ce098ae5d5 339 Pfam PF04960 Glutaminase 46 322 2.3E-101 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 RPIT_08880 86a1b2fabb2cd808481d95ce098ae5d5 339 TIGRFAM TIGR03814 Gln_ase: glutaminase A 38 322 4.4E-92 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 RPIT_05600 3adc2eb88edcdcf2b993fff399fab654 666 Pfam PF13520 Amino acid permease 53 464 1.4E-26 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 RPIT_05600 3adc2eb88edcdcf2b993fff399fab654 666 Gene3D G3DSA:1.20.1740.10 50 505 7.0E-18 T 13-10-2018 RPIT_09455 dd7435dc6096fd8a2255f9eb0ba6720e 161 SUPERFAMILY SSF52206 22 109 2.09E-17 T 13-10-2018 IPR036490 Hypothetical protein MTH538 superfamily RPIT_09455 dd7435dc6096fd8a2255f9eb0ba6720e 161 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 4 113 3.3E-22 T 13-10-2018 IPR015032 MTH538 TIR-like domain RPIT_09455 dd7435dc6096fd8a2255f9eb0ba6720e 161 Gene3D G3DSA:3.40.50.9200 21 110 5.6E-5 T 13-10-2018 IPR036490 Hypothetical protein MTH538 superfamily RPIT_05905 7c39e26c924d51aa6a21d0ba9dcdd2c1 205 Pfam PF13489 Methyltransferase domain 21 180 1.8E-12 T 13-10-2018 RPIT_05905 7c39e26c924d51aa6a21d0ba9dcdd2c1 205 SUPERFAMILY SSF53335 3 205 1.46E-29 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_05905 7c39e26c924d51aa6a21d0ba9dcdd2c1 205 Gene3D G3DSA:3.40.50.150 1 205 3.2E-29 T 13-10-2018 RPIT_02685 0f249e31d74280115e5ad71c011ffc96 618 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 1 612 1.5E-213 T 13-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02685 0f249e31d74280115e5ad71c011ffc96 618 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 63 120 3.3E-25 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02685 0f249e31d74280115e5ad71c011ffc96 618 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 57 81 2.9E-15 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RPIT_02685 0f249e31d74280115e5ad71c011ffc96 618 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 356 378 2.9E-15 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RPIT_02685 0f249e31d74280115e5ad71c011ffc96 618 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 83 103 2.9E-15 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RPIT_02685 0f249e31d74280115e5ad71c011ffc96 618 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 413 435 2.9E-15 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RPIT_02685 0f249e31d74280115e5ad71c011ffc96 618 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 488 509 2.9E-15 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RPIT_02685 0f249e31d74280115e5ad71c011ffc96 618 Pfam PF00361 Proton-conducting membrane transporter 132 420 4.2E-79 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02685 0f249e31d74280115e5ad71c011ffc96 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 221 242 1.2E-61 T 13-10-2018 RPIT_02685 0f249e31d74280115e5ad71c011ffc96 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 414 433 1.2E-61 T 13-10-2018 RPIT_02685 0f249e31d74280115e5ad71c011ffc96 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 81 106 1.2E-61 T 13-10-2018 RPIT_02685 0f249e31d74280115e5ad71c011ffc96 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 243 269 1.2E-61 T 13-10-2018 RPIT_02685 0f249e31d74280115e5ad71c011ffc96 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 109 129 1.2E-61 T 13-10-2018 RPIT_02685 0f249e31d74280115e5ad71c011ffc96 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 156 177 1.2E-61 T 13-10-2018 RPIT_02685 0f249e31d74280115e5ad71c011ffc96 618 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 311 323 1.2E-61 T 13-10-2018 RPIT_10975 2454858b979f46493cd7d8ec9230eacc 782 Pfam PF02687 FtsX-like permease family 683 770 6.0E-6 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 RPIT_10975 2454858b979f46493cd7d8ec9230eacc 782 Pfam PF02687 FtsX-like permease family 284 377 2.4E-7 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 RPIT_11475 3b24ca2e1e158d75458e4c984f6ab0bb 145 Gene3D G3DSA:3.40.1650.10 1 145 2.1E-31 T 13-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 RPIT_11475 3b24ca2e1e158d75458e4c984f6ab0bb 145 Pfam PF05025 RbsD / FucU transport protein family 1 142 4.9E-29 T 13-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 RPIT_11475 3b24ca2e1e158d75458e4c984f6ab0bb 145 SUPERFAMILY SSF102546 1 142 1.57E-28 T 13-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 RPIT_07615 860a5269b56a1a8b2853c7166d5a0ae8 199 SUPERFAMILY SSF48498 78 191 2.0E-21 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RPIT_07615 860a5269b56a1a8b2853c7166d5a0ae8 199 Gene3D G3DSA:1.10.10.60 1 48 7.0E-21 T 13-10-2018 RPIT_07615 860a5269b56a1a8b2853c7166d5a0ae8 199 Gene3D G3DSA:1.10.357.10 49 193 1.2E-30 T 13-10-2018 RPIT_07615 860a5269b56a1a8b2853c7166d5a0ae8 199 SUPERFAMILY SSF46689 4 70 6.67E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_07615 860a5269b56a1a8b2853c7166d5a0ae8 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 8.0E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_08085 ae38f4b6f1de0971a317e83c09e8764a 449 SUPERFAMILY SSF55797 70 201 1.62E-8 T 13-10-2018 IPR035940 CAP superfamily RPIT_08085 ae38f4b6f1de0971a317e83c09e8764a 449 Gene3D G3DSA:3.40.33.10 67 205 9.2E-7 T 13-10-2018 IPR035940 CAP superfamily RPIT_08085 ae38f4b6f1de0971a317e83c09e8764a 449 Pfam PF00188 Cysteine-rich secretory protein family 78 195 6.1E-7 T 13-10-2018 IPR014044 CAP domain RPIT_11670 ca5d8bc413562c76602489606c1cc82c 270 Gene3D G3DSA:1.10.3720.10 1 263 2.6E-46 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_11670 ca5d8bc413562c76602489606c1cc82c 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 258 4.5E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_11670 ca5d8bc413562c76602489606c1cc82c 270 SUPERFAMILY SSF161098 5 268 1.59E-49 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_04995 8ec2d55564bd72f23cc01fd447740780 335 Pfam PF02562 PhoH-like protein 116 319 2.3E-93 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 RPIT_04995 8ec2d55564bd72f23cc01fd447740780 335 SUPERFAMILY SSF52540 115 286 4.25E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04995 8ec2d55564bd72f23cc01fd447740780 335 Gene3D G3DSA:3.40.50.300 112 319 3.0E-74 T 13-10-2018 RPIT_13900 d2b077094a42547304b16fc700ccd8d4 201 Gene3D G3DSA:3.20.80.10 1 199 5.7E-70 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily RPIT_13900 d2b077094a42547304b16fc700ccd8d4 201 SUPERFAMILY SSF55136 121 191 9.24E-10 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily RPIT_13900 d2b077094a42547304b16fc700ccd8d4 201 Pfam PF06445 GyrI-like small molecule binding domain 19 196 8.5E-20 T 13-10-2018 IPR029442 GyrI-like small molecule binding domain RPIT_09225 0b369b55898ff60e3f0e1b170cc08b10 193 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 7 79 5.3E-27 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family RPIT_10905 d59260eb375ea82a6ed16cc7c759e286 452 SUPERFAMILY SSF103473 31 442 5.49E-41 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_10905 d59260eb375ea82a6ed16cc7c759e286 452 Gene3D G3DSA:1.20.1250.20 13 233 5.1E-67 T 13-10-2018 RPIT_10905 d59260eb375ea82a6ed16cc7c759e286 452 Gene3D G3DSA:1.20.1250.20 234 449 4.1E-63 T 13-10-2018 RPIT_10905 d59260eb375ea82a6ed16cc7c759e286 452 Pfam PF07690 Major Facilitator Superfamily 54 311 1.7E-15 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIT_00315 869851659971b42ecac796e10ed3a122 102 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 3 98 1.7E-11 T 13-10-2018 IPR008407 Branched-chain amino acid transport, AzlD RPIT_13565 06a3e2b47282b30a049486dc9a5b352b 294 SUPERFAMILY SSF110849 30 127 1.28E-27 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily RPIT_13565 06a3e2b47282b30a049486dc9a5b352b 294 Pfam PF02195 ParB-like nuclease domain 35 123 2.0E-22 T 13-10-2018 IPR003115 ParB/Sulfiredoxin RPIT_13565 06a3e2b47282b30a049486dc9a5b352b 294 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 33 209 2.7E-57 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 RPIT_13565 06a3e2b47282b30a049486dc9a5b352b 294 SUPERFAMILY SSF109709 116 224 8.11E-33 T 13-10-2018 RPIT_13565 06a3e2b47282b30a049486dc9a5b352b 294 Gene3D G3DSA:3.90.1530.30 47 109 1.7E-24 T 13-10-2018 RPIT_13565 06a3e2b47282b30a049486dc9a5b352b 294 Gene3D G3DSA:1.10.10.2830 110 224 1.4E-34 T 13-10-2018 RPIT_13565 06a3e2b47282b30a049486dc9a5b352b 294 SMART SM00470 34 124 1.8E-32 T 13-10-2018 IPR003115 ParB/Sulfiredoxin RPIT_03490 20d0a75548bb7e36e2e0e77ee2ab3d9a 291 Hamap MF_01974 Methionine aminopeptidase [map]. 38 284 39.482 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 RPIT_03490 20d0a75548bb7e36e2e0e77ee2ab3d9a 291 Pfam PF00557 Metallopeptidase family M24 47 274 3.3E-52 T 13-10-2018 IPR000994 Peptidase M24 RPIT_03490 20d0a75548bb7e36e2e0e77ee2ab3d9a 291 Gene3D G3DSA:3.90.230.10 3 288 3.2E-115 T 13-10-2018 RPIT_03490 20d0a75548bb7e36e2e0e77ee2ab3d9a 291 SUPERFAMILY SSF55920 42 284 9.29E-85 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like RPIT_03490 20d0a75548bb7e36e2e0e77ee2ab3d9a 291 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 201 219 - T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 RPIT_03490 20d0a75548bb7e36e2e0e77ee2ab3d9a 291 PRINTS PR00599 Methionine aminopeptidase-1 signature 103 116 7.0E-21 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 RPIT_03490 20d0a75548bb7e36e2e0e77ee2ab3d9a 291 PRINTS PR00599 Methionine aminopeptidase-1 signature 226 238 7.0E-21 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 RPIT_03490 20d0a75548bb7e36e2e0e77ee2ab3d9a 291 PRINTS PR00599 Methionine aminopeptidase-1 signature 195 207 7.0E-21 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 RPIT_03490 20d0a75548bb7e36e2e0e77ee2ab3d9a 291 PRINTS PR00599 Methionine aminopeptidase-1 signature 125 141 7.0E-21 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 RPIT_03490 20d0a75548bb7e36e2e0e77ee2ab3d9a 291 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 41 282 5.6E-85 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 RPIT_13185 d07126718065b385ebe882eb9a279fe5 499 Gene3D G3DSA:3.50.50.60 30 453 5.2E-25 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_13185 d07126718065b385ebe882eb9a279fe5 499 Gene3D G3DSA:3.90.660.50 105 426 5.2E-25 T 13-10-2018 RPIT_13185 d07126718065b385ebe882eb9a279fe5 499 Pfam PF01593 Flavin containing amine oxidoreductase 35 476 4.4E-38 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 RPIT_13185 d07126718065b385ebe882eb9a279fe5 499 SUPERFAMILY SSF51905 27 480 3.24E-46 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_05770 5bb39fdec2a7aea3897996ca481ab54c 294 SUPERFAMILY SSF51430 10 292 9.56E-73 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily RPIT_05770 5bb39fdec2a7aea3897996ca481ab54c 294 PRINTS PR00069 Aldo-keto reductase signature 42 66 2.1E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIT_05770 5bb39fdec2a7aea3897996ca481ab54c 294 PRINTS PR00069 Aldo-keto reductase signature 146 163 2.1E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIT_05770 5bb39fdec2a7aea3897996ca481ab54c 294 PRINTS PR00069 Aldo-keto reductase signature 183 212 2.1E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIT_05770 5bb39fdec2a7aea3897996ca481ab54c 294 PRINTS PR00069 Aldo-keto reductase signature 226 250 2.1E-6 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIT_05770 5bb39fdec2a7aea3897996ca481ab54c 294 Gene3D G3DSA:3.20.20.100 4 294 2.3E-75 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily RPIT_05770 5bb39fdec2a7aea3897996ca481ab54c 294 Pfam PF00248 Aldo/keto reductase family 14 292 3.0E-57 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain RPIT_13675 f5b2a08e38c8a9674b1f0aa847df98fe 190 Pfam PF12089 Transmembrane domain of unknown function (DUF3566) 72 189 6.9E-38 T 13-10-2018 IPR021949 Domain of unknown function DUF3566. transmembrane RPIT_02555 fe1ca8d4c3ec49207b21ac3e662ea83c 272 SUPERFAMILY SSF53448 8 270 4.47E-37 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_02555 fe1ca8d4c3ec49207b21ac3e662ea83c 272 Pfam PF00483 Nucleotidyl transferase 42 241 1.8E-20 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 RPIT_02555 fe1ca8d4c3ec49207b21ac3e662ea83c 272 Gene3D G3DSA:3.90.550.10 2 271 4.3E-47 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_07690 75db9084292344be0441c315e184b08b 83 Pfam PF13828 Domain of unknown function (DUF4190) 5 64 2.3E-9 T 13-10-2018 IPR025241 Domain of unknown function DUF4190 RPIT_10450 dfda97038d7725e857a82575f637bf61 236 SUPERFAMILY SSF52172 120 231 1.57E-15 T 13-10-2018 IPR011006 CheY-like superfamily RPIT_10450 dfda97038d7725e857a82575f637bf61 236 Gene3D G3DSA:3.40.50.2300 111 235 1.7E-15 T 13-10-2018 RPIT_10450 dfda97038d7725e857a82575f637bf61 236 SMART SM00448 121 231 0.0033 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_10450 dfda97038d7725e857a82575f637bf61 236 Pfam PF00072 Response regulator receiver domain 123 220 8.4E-10 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RPIT_11255 9238bcc345febbfd327f8f4fe9296959 200 Pfam PF08241 Methyltransferase domain 41 135 1.1E-23 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 RPIT_11255 9238bcc345febbfd327f8f4fe9296959 200 Gene3D G3DSA:3.40.50.150 3 195 8.2E-34 T 13-10-2018 RPIT_11255 9238bcc345febbfd327f8f4fe9296959 200 SUPERFAMILY SSF53335 10 186 1.84E-36 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_13820 3af690eb009457a14f42898a9d391b3a 216 Pfam PF13671 AAA domain 2 155 1.3E-7 T 13-10-2018 RPIT_13820 3af690eb009457a14f42898a9d391b3a 216 SUPERFAMILY SSF52540 2 178 1.56E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_13820 3af690eb009457a14f42898a9d391b3a 216 Gene3D G3DSA:3.40.50.300 2 211 3.5E-10 T 13-10-2018 RPIT_11630 77f4c69ce265bebae3a1bbd795970e3f 448 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 12 311 9.7E-88 T 13-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal RPIT_11630 77f4c69ce265bebae3a1bbd795970e3f 448 SMART SM00640 12 415 1.1E-104 T 13-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 RPIT_11630 77f4c69ce265bebae3a1bbd795970e3f 448 Gene3D G3DSA:2.115.10.20 4 324 7.0E-114 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RPIT_11630 77f4c69ce265bebae3a1bbd795970e3f 448 SUPERFAMILY SSF75005 5 323 3.05E-94 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RPIT_11630 77f4c69ce265bebae3a1bbd795970e3f 448 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 12 25 - T 13-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 RPIT_12505 ba5310426ba89edd4c8b33dadbbc7571 112 Gene3D G3DSA:3.30.420.130 1 109 6.3E-13 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily RPIT_12505 ba5310426ba89edd4c8b33dadbbc7571 112 SUPERFAMILY SSF53146 1 109 9.03E-14 T 13-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily RPIT_12505 ba5310426ba89edd4c8b33dadbbc7571 112 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 16 97 8.6E-8 T 13-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis RPIT_14195 d2b353b502e583dd69c0d495d8213ebb 449 Pfam PF03315 Serine dehydratase beta chain 4 147 3.9E-51 T 13-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 RPIT_14195 d2b353b502e583dd69c0d495d8213ebb 449 Gene3D G3DSA:3.30.1330.90 11 151 9.6E-45 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 RPIT_14195 d2b353b502e583dd69c0d495d8213ebb 449 Pfam PF03313 Serine dehydratase alpha chain 181 443 6.9E-102 T 13-10-2018 IPR005130 Serine dehydratase-like, alpha subunit RPIT_14195 d2b353b502e583dd69c0d495d8213ebb 449 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 4 446 2.0E-200 T 13-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 RPIT_14195 d2b353b502e583dd69c0d495d8213ebb 449 SUPERFAMILY SSF143548 17 148 2.01E-38 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 RPIT_02220 6ffd69ccc8e7d9567a5fb265e6e05955 479 SUPERFAMILY SSF52540 7 434 7.97E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_02220 6ffd69ccc8e7d9567a5fb265e6e05955 479 Gene3D G3DSA:3.40.50.300 227 429 2.8E-30 T 13-10-2018 RPIT_02220 6ffd69ccc8e7d9567a5fb265e6e05955 479 Pfam PF12696 TraM recognition site of TraD and TraG 291 407 1.7E-22 T 13-10-2018 IPR032689 TraD/TraG, TraM recognition site RPIT_11665 f3fb1cc03b26600fa691545bdc951185 717 SUPERFAMILY SSF48208 243 705 6.8E-21 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 RPIT_11665 f3fb1cc03b26600fa691545bdc951185 717 Gene3D G3DSA:1.50.10.10 309 665 1.1E-8 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 RPIT_14430 3ae971e277c24943459218631ed27d32 261 SUPERFAMILY SSF47240 6 232 3.55E-25 T 13-10-2018 IPR009078 Ferritin-like superfamily RPIT_14430 3ae971e277c24943459218631ed27d32 261 Gene3D G3DSA:1.10.620.20 10 236 3.1E-11 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 RPIT_09340 ec96ea59f07124c23686173461201fd5 598 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 332 354 3.1E-17 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 RPIT_09340 ec96ea59f07124c23686173461201fd5 598 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 126 145 3.1E-17 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 RPIT_09340 ec96ea59f07124c23686173461201fd5 598 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 92 104 3.1E-17 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 RPIT_09340 ec96ea59f07124c23686173461201fd5 598 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 355 369 3.1E-17 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 RPIT_09340 ec96ea59f07124c23686173461201fd5 598 Pfam PF01555 DNA methylase 92 387 1.0E-41 T 13-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 RPIT_09340 ec96ea59f07124c23686173461201fd5 598 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 95 101 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RPIT_09340 ec96ea59f07124c23686173461201fd5 598 SUPERFAMILY SSF53335 62 398 4.88E-61 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_10355 7f44aa158f747756cb12d89a518e07fb 444 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 299 345 8.1E-6 T 13-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 RPIT_10355 7f44aa158f747756cb12d89a518e07fb 444 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 56 5.7E-7 T 13-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RPIT_10355 7f44aa158f747756cb12d89a518e07fb 444 Gene3D G3DSA:3.40.50.2000 218 379 2.8E-69 T 13-10-2018 RPIT_10355 7f44aa158f747756cb12d89a518e07fb 444 Gene3D G3DSA:3.40.50.2000 9 217 2.8E-69 T 13-10-2018 RPIT_10355 7f44aa158f747756cb12d89a518e07fb 444 SUPERFAMILY SSF53756 1 395 4.28E-63 T 13-10-2018 RPIT_09030 f2516dc6aa433ec064ae3a33f5f5cadc 571 SUPERFAMILY SSF52540 41 228 1.32E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04785 9d0f7599882865e082a207285c73287d 234 Gene3D G3DSA:3.30.2010.10 141 230 2.0E-12 T 13-10-2018 RPIT_04785 9d0f7599882865e082a207285c73287d 234 Pfam PF01863 Protein of unknown function DUF45 29 231 1.9E-51 T 13-10-2018 IPR002725 Protein of unknown function DUF45 RPIT_07530 abdff9db05e2ddb67d6479c9f0475329 105 Pfam PF13518 Helix-turn-helix domain 12 62 2.6E-8 T 13-10-2018 RPIT_07530 abdff9db05e2ddb67d6479c9f0475329 105 SUPERFAMILY SSF48295 8 62 3.56E-12 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 RPIT_13995 abdff9db05e2ddb67d6479c9f0475329 105 Pfam PF13518 Helix-turn-helix domain 12 62 2.6E-8 T 13-10-2018 RPIT_13995 abdff9db05e2ddb67d6479c9f0475329 105 SUPERFAMILY SSF48295 8 62 3.56E-12 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 RPIT_10500 70aae003e47b878caa9069a01eb3126e 506 Pfam PF02646 RmuC family 160 448 1.8E-88 T 13-10-2018 IPR003798 DNA recombination RmuC RPIT_13765 bae5c607cdcfc2ba97286e19ee1e2f85 212 Pfam PF02397 Bacterial sugar transferase 14 185 6.1E-61 T 13-10-2018 IPR003362 Bacterial sugar transferase RPIT_01480 04fbdc9801af608e2111e3ac8baf9e9c 534 Pfam PF07681 DoxX 396 476 1.7E-5 T 13-10-2018 IPR032808 DoxX family RPIT_10425 2e583940c6386341c9423e1c344855ce 93 Gene3D G3DSA:3.30.2310.20 1 93 5.3E-23 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily RPIT_10425 2e583940c6386341c9423e1c344855ce 93 SUPERFAMILY SSF143011 4 93 9.02E-15 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily RPIT_10425 2e583940c6386341c9423e1c344855ce 93 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 93 1.6E-19 T 13-10-2018 IPR007711 Toxin HigB-1 RPIT_07165 7b83dd21927db92bc7edd5e4289f1b8c 301 Pfam PF08378 Nuclease-related domain 132 244 2.8E-11 T 13-10-2018 IPR011528 Nuclease-related domain, NERD RPIT_13070 dabe118e6d00b8fc224b80bb35e99661 200 Pfam PF14110 Domain of unknown function (DUF4282) 114 194 1.8E-18 T 13-10-2018 IPR025557 Protein of unknown function DUF4282 RPIT_07000 e89294cff03ea13c62f0fc93e93caabb 613 SUPERFAMILY SSF143975 4 424 1.31E-130 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RPIT_07000 e89294cff03ea13c62f0fc93e93caabb 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 611 1.7E-235 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RPIT_07000 e89294cff03ea13c62f0fc93e93caabb 613 Pfam PF00920 Dehydratase family 34 608 4.8E-209 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RPIT_07000 e89294cff03ea13c62f0fc93e93caabb 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RPIT_07000 e89294cff03ea13c62f0fc93e93caabb 613 SUPERFAMILY SSF52016 425 611 1.33E-56 T 13-10-2018 RPIT_07000 e89294cff03ea13c62f0fc93e93caabb 613 Gene3D G3DSA:3.50.30.80 425 576 4.6E-53 T 13-10-2018 RPIT_07000 e89294cff03ea13c62f0fc93e93caabb 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 611 43.783 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RPIT_07000 e89294cff03ea13c62f0fc93e93caabb 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 513 524 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RPIT_12165 86c56ce029f87a46b21a188aa4ff1274 355 Pfam PF04143 Sulphur transport 18 325 3.4E-91 T 13-10-2018 IPR007272 Sulphur transport domain RPIT_03745 f908654885d6b83b32866209f69ea6db 400 Pfam PF06224 Winged helix DNA-binding domain 37 375 1.9E-67 T 13-10-2018 IPR009351 Protein of unknown function DUF1006 RPIT_14375 49f2f0217fd443a419d2c2e0b624eed4 519 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 17 38 2.6E-26 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 RPIT_14375 49f2f0217fd443a419d2c2e0b624eed4 519 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 318 337 2.6E-26 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 RPIT_14375 49f2f0217fd443a419d2c2e0b624eed4 519 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 92 118 2.6E-26 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 RPIT_14375 49f2f0217fd443a419d2c2e0b624eed4 519 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 46 65 2.6E-26 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 RPIT_14375 49f2f0217fd443a419d2c2e0b624eed4 519 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 396 416 2.6E-26 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 RPIT_14375 49f2f0217fd443a419d2c2e0b624eed4 519 SUPERFAMILY SSF161070 9 495 5.75E-135 T 13-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 RPIT_14375 49f2f0217fd443a419d2c2e0b624eed4 519 Pfam PF00209 Sodium:neurotransmitter symporter family 9 127 4.9E-39 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 RPIT_14375 49f2f0217fd443a419d2c2e0b624eed4 519 Pfam PF00209 Sodium:neurotransmitter symporter family 130 491 1.6E-73 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 RPIT_14375 49f2f0217fd443a419d2c2e0b624eed4 519 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 33 47 - T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 RPIT_10070 605eb11181c74a1e64405088468b65ce 404 SUPERFAMILY SSF54909 56 396 2.5E-70 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel RPIT_10070 605eb11181c74a1e64405088468b65ce 404 Pfam PF04261 Dyp-type peroxidase family 60 390 7.6E-66 T 13-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 RPIT_10070 605eb11181c74a1e64405088468b65ce 404 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 60 390 1.2E-65 T 13-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 RPIT_08835 ada19328b490cc7fae60c6b19cce7756 285 SUPERFAMILY SSF52540 4 257 6.37E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_08315 d5ea425105e7baf57978c1d1fd3bb822 240 TIGRFAM TIGR03843 TIGR03843: conserved hypothetical protein 2 240 1.1E-85 T 13-10-2018 IPR022292 Conserved hypothetical protein CHP03843 RPIT_11345 fbc62b5718f123efb2bf5750b47dfc71 156 SUPERFAMILY SSF55729 5 138 1.92E-22 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_11345 fbc62b5718f123efb2bf5750b47dfc71 156 Gene3D G3DSA:3.40.630.30 2 153 1.4E-31 T 13-10-2018 RPIT_11345 fbc62b5718f123efb2bf5750b47dfc71 156 Pfam PF00583 Acetyltransferase (GNAT) family 40 132 1.9E-13 T 13-10-2018 IPR000182 GNAT domain RPIT_06945 4e8f133841765e68015ea29e953d0a67 248 SUPERFAMILY SSF52317 42 242 2.52E-31 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_06945 4e8f133841765e68015ea29e953d0a67 248 Gene3D G3DSA:3.40.50.880 13 237 1.7E-38 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like RPIT_06945 4e8f133841765e68015ea29e953d0a67 248 Pfam PF00117 Glutamine amidotransferase class-I 47 192 1.1E-12 T 13-10-2018 IPR017926 Glutamine amidotransferase RPIT_00770 46ae336d34e49c1163aaa95f810176f1 560 Gene3D G3DSA:3.30.750.24 440 550 2.3E-13 T 13-10-2018 IPR036513 STAS domain superfamily RPIT_00770 46ae336d34e49c1163aaa95f810176f1 560 SUPERFAMILY SSF52091 451 546 3.34E-9 T 13-10-2018 IPR036513 STAS domain superfamily RPIT_00770 46ae336d34e49c1163aaa95f810176f1 560 Pfam PF01740 STAS domain 451 522 1.7E-8 T 13-10-2018 IPR002645 STAS domain RPIT_00770 46ae336d34e49c1163aaa95f810176f1 560 Pfam PF00916 Sulfate permease family 29 387 1.3E-72 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 RPIT_06440 0bea27dd4a8e056614f88a4c1e5e27b8 261 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 51 68 - T 13-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 RPIT_06440 0bea27dd4a8e056614f88a4c1e5e27b8 261 Pfam PF00218 Indole-3-glycerol phosphate synthase 4 254 8.5E-81 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 RPIT_06440 0bea27dd4a8e056614f88a4c1e5e27b8 261 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 2 257 33.33 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 RPIT_06440 0bea27dd4a8e056614f88a4c1e5e27b8 261 Hamap MF_00134_A Indole-3-glycerol phosphate synthase [trpC]. 31 253 29.641 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 RPIT_06440 0bea27dd4a8e056614f88a4c1e5e27b8 261 Gene3D G3DSA:3.20.20.70 1 261 4.8E-104 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_06440 0bea27dd4a8e056614f88a4c1e5e27b8 261 SUPERFAMILY SSF51366 2 256 4.16E-80 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 RPIT_10575 9cbf3c7f1efb2e4d10380138e2d31585 138 Pfam PF09862 Protein of unknown function (DUF2089) 12 136 1.9E-32 T 13-10-2018 IPR018658 Protein of unknown function DUF2089 RPIT_12810 6ca0596157dd6681b6b04d19d5eee47e 150 SUPERFAMILY SSF51182 11 119 7.18E-22 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily RPIT_12810 6ca0596157dd6681b6b04d19d5eee47e 150 Pfam PF07883 Cupin domain 39 114 7.2E-14 T 13-10-2018 IPR013096 Cupin 2, conserved barrel RPIT_12810 6ca0596157dd6681b6b04d19d5eee47e 150 Gene3D G3DSA:2.60.120.10 14 139 8.3E-36 T 13-10-2018 IPR014710 RmlC-like jelly roll fold RPIT_07705 9b6cd01b64815cbe04309176f806eb69 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 71 3.7E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_07705 9b6cd01b64815cbe04309176f806eb69 208 SUPERFAMILY SSF46689 12 87 8.25E-19 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_07705 9b6cd01b64815cbe04309176f806eb69 208 Gene3D G3DSA:1.10.357.10 21 200 4.7E-34 T 13-10-2018 RPIT_07705 9b6cd01b64815cbe04309176f806eb69 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 1.8E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_07705 9b6cd01b64815cbe04309176f806eb69 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 1.8E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_06470 6ebc1f6e57d08b0145a7c15c69ace831 492 Gene3D G3DSA:3.40.50.200 174 489 8.5E-38 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 RPIT_06470 6ebc1f6e57d08b0145a7c15c69ace831 492 SUPERFAMILY SSF52743 185 477 2.75E-33 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 RPIT_06470 6ebc1f6e57d08b0145a7c15c69ace831 492 Pfam PF00082 Subtilase family 187 460 2.3E-15 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIT_01835 ba0a86ad38d88356bc226b480e006054 205 SUPERFAMILY SSF109604 28 194 1.65E-14 T 13-10-2018 RPIT_01835 ba0a86ad38d88356bc226b480e006054 205 PIRSF PIRSF035170 16 205 1.6E-35 T 13-10-2018 IPR009218 Predicted HD phosphohydrolase RPIT_02450 e011beee88695542a806a004b6bd5c11 186 SUPERFAMILY SSF52833 52 180 2.04E-27 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_02450 e011beee88695542a806a004b6bd5c11 186 Gene3D G3DSA:3.40.30.10 34 183 3.3E-31 T 13-10-2018 RPIT_02450 e011beee88695542a806a004b6bd5c11 186 Pfam PF00578 AhpC/TSA family 54 165 4.0E-16 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RPIT_11460 5dad44e9614f790a87934395fbbcefc8 223 SUPERFAMILY SSF51569 1 218 7.75E-55 T 13-10-2018 RPIT_11460 5dad44e9614f790a87934395fbbcefc8 223 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 203 4.1E-39 T 13-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 RPIT_11460 5dad44e9614f790a87934395fbbcefc8 223 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 RPIT_11460 5dad44e9614f790a87934395fbbcefc8 223 Gene3D G3DSA:3.20.20.70 1 222 6.5E-66 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_08050 6e324f0bbea2e93cec9f03d8404dc9a1 284 Pfam PF13614 AAA domain 32 207 5.4E-63 T 13-10-2018 IPR025669 AAA domain RPIT_08050 6e324f0bbea2e93cec9f03d8404dc9a1 284 Gene3D G3DSA:3.40.50.300 26 284 2.0E-83 T 13-10-2018 RPIT_08050 6e324f0bbea2e93cec9f03d8404dc9a1 284 SUPERFAMILY SSF52540 31 279 7.64E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_14640 074924fb2364800e4896cb281cb6a53c 80 Gene3D G3DSA:2.40.50.90 1 79 2.6E-15 T 13-10-2018 IPR035437 SNase-like, OB-fold superfamily RPIT_14640 074924fb2364800e4896cb281cb6a53c 80 Pfam PF00565 Staphylococcal nuclease homologue 3 75 2.4E-9 T 13-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 RPIT_14640 074924fb2364800e4896cb281cb6a53c 80 SUPERFAMILY SSF50199 2 76 1.57E-15 T 13-10-2018 RPIT_07405 1364f431ded2f9f04fedfca0d9b14b66 112 SUPERFAMILY SSF52499 3 86 7.06E-15 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 RPIT_07405 1364f431ded2f9f04fedfca0d9b14b66 112 Gene3D G3DSA:3.40.50.850 2 109 5.6E-13 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 RPIT_07405 1364f431ded2f9f04fedfca0d9b14b66 112 Pfam PF00857 Isochorismatase family 17 88 2.8E-10 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 RPIT_09600 97c1b2f9b7d00c07b581b0c4677ce031 95 Pfam PF02467 Transcription factor WhiB 27 90 1.5E-26 T 13-10-2018 IPR034768 WhiB-like iron-sulfur binding domain RPIT_09600 97c1b2f9b7d00c07b581b0c4677ce031 95 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 15 95 19.261 T 13-10-2018 IPR003482 Transcription factor WhiB RPIT_13065 145e005527daae381aac75259d06968c 839 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 69 783 20.655 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 RPIT_13065 145e005527daae381aac75259d06968c 839 Pfam PF03030 Inorganic H+ pyrophosphatase 81 777 1.1E-181 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 RPIT_13065 145e005527daae381aac75259d06968c 839 PIRSF PIRSF001265 69 792 4.8E-168 T 13-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 RPIT_13220 e2e94bbcbc7d96bd21590fa243a28123 396 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 5 317 1.2E-110 T 13-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 RPIT_13220 e2e94bbcbc7d96bd21590fa243a28123 396 Pfam PF03741 Integral membrane protein TerC family 71 273 9.8E-50 T 13-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 RPIT_08020 45abaee3ff8df9ca4972a4ea8ae33e4e 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 30 2.0E-16 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 RPIT_08020 45abaee3ff8df9ca4972a4ea8ae33e4e 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 174 184 2.0E-16 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 RPIT_08020 45abaee3ff8df9ca4972a4ea8ae33e4e 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 190 198 2.0E-16 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 RPIT_08020 45abaee3ff8df9ca4972a4ea8ae33e4e 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 5 17 2.0E-16 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 RPIT_08020 45abaee3ff8df9ca4972a4ea8ae33e4e 300 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 2.0E-16 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 RPIT_08020 45abaee3ff8df9ca4972a4ea8ae33e4e 300 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 2 300 36.869 T 13-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 RPIT_08020 45abaee3ff8df9ca4972a4ea8ae33e4e 300 Gene3D G3DSA:3.40.50.620 2 265 4.1E-74 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIT_08020 45abaee3ff8df9ca4972a4ea8ae33e4e 300 SUPERFAMILY SSF52374 3 245 9.12E-69 T 13-10-2018 RPIT_08020 45abaee3ff8df9ca4972a4ea8ae33e4e 300 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 241 3.6E-44 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 RPIT_11070 0470b0978cf6bc5ee7623b56a6bdde93 152 Gene3D G3DSA:1.20.120.520 10 150 4.5E-18 T 13-10-2018 RPIT_11070 0470b0978cf6bc5ee7623b56a6bdde93 152 Pfam PF01814 Hemerythrin HHE cation binding domain 13 123 4.1E-14 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 RPIT_05050 e4eb68a4ac16b71ce1a4b4baeb5aacda 254 Gene3D G3DSA:3.40.1180.10 2 247 2.1E-96 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 RPIT_05050 e4eb68a4ac16b71ce1a4b4baeb5aacda 254 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 25 253 38.665 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RPIT_05050 e4eb68a4ac16b71ce1a4b4baeb5aacda 254 SUPERFAMILY SSF64005 24 248 1.11E-84 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 RPIT_05050 e4eb68a4ac16b71ce1a4b4baeb5aacda 254 Pfam PF01255 Putative undecaprenyl diphosphate synthase 32 252 4.3E-73 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RPIT_05050 e4eb68a4ac16b71ce1a4b4baeb5aacda 254 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 25 252 6.3E-74 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RPIT_05050 e4eb68a4ac16b71ce1a4b4baeb5aacda 254 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 198 215 - T 13-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 RPIT_01190 0a18ef672861145f69c5be8acede1c9d 321 Pfam PF06089 L-asparaginase II 8 309 2.2E-102 T 13-10-2018 IPR010349 L-asparaginase II RPIT_10065 aa71bef60f6a18e2e2d8f550ae0c9d3c 130 SUPERFAMILY SSF110087 11 117 3.53E-28 T 13-10-2018 IPR036182 Copper chaperone PCuAC superfamily RPIT_10065 aa71bef60f6a18e2e2d8f550ae0c9d3c 130 Pfam PF04314 Copper chaperone PCu(A)C 9 109 1.7E-28 T 13-10-2018 IPR007410 Copper chaperone PCuAC RPIT_10065 aa71bef60f6a18e2e2d8f550ae0c9d3c 130 Gene3D G3DSA:2.60.40.1890 5 120 6.5E-31 T 13-10-2018 IPR036182 Copper chaperone PCuAC superfamily RPIT_01725 b9c640a154accc627df32abf51147815 303 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 63 301 9.3E-71 T 13-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 RPIT_01725 b9c640a154accc627df32abf51147815 303 Pfam PF01578 Cytochrome C assembly protein 88 298 4.5E-39 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RPIT_06600 8fb0c707e48339facfbf9d4b121c6db9 180 Pfam PF03703 Bacterial PH domain 84 139 1.1E-8 T 13-10-2018 IPR005182 Domain of unknown function DUF304 RPIT_00955 23e1ee196bb2e4e94570ace42144c3b6 106 Pfam PF08378 Nuclease-related domain 19 86 4.4E-11 T 13-10-2018 IPR011528 Nuclease-related domain, NERD RPIT_07410 baa9dde5f6e2fe8e9d8066abc11b360c 428 SUPERFAMILY SSF46785 228 271 1.8E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_07410 baa9dde5f6e2fe8e9d8066abc11b360c 428 Pfam PF13635 Domain of unknown function (DUF4143) 205 369 7.2E-23 T 13-10-2018 IPR025420 Domain of unknown function DUF4143 RPIT_07410 baa9dde5f6e2fe8e9d8066abc11b360c 428 Pfam PF13173 AAA domain 23 140 1.6E-14 T 13-10-2018 RPIT_07410 baa9dde5f6e2fe8e9d8066abc11b360c 428 SUPERFAMILY SSF52540 18 162 2.91E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04050 eaed75ee0bc6c94865b10df058397696 148 Pfam PF04472 Cell division protein SepF 60 129 4.2E-24 T 13-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 RPIT_04050 eaed75ee0bc6c94865b10df058397696 148 Gene3D G3DSA:3.30.110.150 57 138 2.6E-26 T 13-10-2018 IPR038594 SepF-like superfamily RPIT_04050 eaed75ee0bc6c94865b10df058397696 148 Hamap MF_01197 Cell division protein SepF [sepF]. 12 139 17.771 T 13-10-2018 IPR023052 Cell division protein SepF GO:0090529 RPIT_00405 fbc93b1d457bf3d0aa7798d6ae57b684 92 Gene3D G3DSA:1.10.287.1060 21 92 3.9E-8 T 13-10-2018 RPIT_00405 fbc93b1d457bf3d0aa7798d6ae57b684 92 SUPERFAMILY SSF140453 24 88 1.96E-7 T 13-10-2018 IPR036689 ESAT-6-like superfamily RPIT_05700 52015f40faf6d2125e892f1ed758d6d4 274 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 80 274 5.3E-21 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RPIT_07735 338e80415f2d7f99a7e64aa1d4c14f1f 202 Pfam PF11188 Protein of unknown function (DUF2975) 78 199 1.2E-11 T 13-10-2018 IPR021354 Protein of unknown function DUF2975 RPIT_10370 33e3e4f9dcf0ae8b31614de8fe840dac 196 Gene3D G3DSA:3.40.50.150 1 189 9.3E-57 T 13-10-2018 RPIT_10370 33e3e4f9dcf0ae8b31614de8fe840dac 196 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 2 183 3.8E-40 T 13-10-2018 RPIT_10370 33e3e4f9dcf0ae8b31614de8fe840dac 196 SUPERFAMILY SSF53335 3 183 5.74E-34 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_05215 1bc1ae5a679eaefcd36bc90d83586ffa 393 Pfam PF13556 PucR C-terminal helix-turn-helix domain 330 387 3.3E-20 T 13-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain RPIT_05215 1bc1ae5a679eaefcd36bc90d83586ffa 393 Gene3D G3DSA:1.10.10.2840 267 393 3.5E-40 T 13-10-2018 RPIT_10940 aac20c7d9d8431c02c86bb019f058cf8 164 SUPERFAMILY SSF46785 11 158 1.82E-36 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily RPIT_10940 aac20c7d9d8431c02c86bb019f058cf8 164 SMART SM00347 43 146 2.9E-23 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_10940 aac20c7d9d8431c02c86bb019f058cf8 164 Pfam PF12802 MarR family 48 110 1.0E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_10940 aac20c7d9d8431c02c86bb019f058cf8 164 ProSitePatterns PS01117 MarR-type HTH domain signature. 85 119 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site RPIT_10940 aac20c7d9d8431c02c86bb019f058cf8 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 122 1.1E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_10940 aac20c7d9d8431c02c86bb019f058cf8 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 136 156 1.1E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_10940 aac20c7d9d8431c02c86bb019f058cf8 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 86 1.1E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_10940 aac20c7d9d8431c02c86bb019f058cf8 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 102 1.1E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIT_10940 aac20c7d9d8431c02c86bb019f058cf8 164 Gene3D G3DSA:1.10.10.10 1 160 9.5E-41 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_06655 58102821b1a502134b67009228d7a401 153 Pfam PF10739 Protein of unknown function (DUF2550) 13 141 1.5E-37 T 13-10-2018 IPR019675 Protein of unknown function DUF2550 RPIT_12010 07e1b9dd3b91fd1bfbfa9140fe95716a 410 SUPERFAMILY SSF53756 2 406 4.32E-64 T 13-10-2018 RPIT_12010 07e1b9dd3b91fd1bfbfa9140fe95716a 410 Gene3D G3DSA:3.40.50.2000 2 225 1.2E-80 T 13-10-2018 RPIT_12010 07e1b9dd3b91fd1bfbfa9140fe95716a 410 Gene3D G3DSA:3.40.50.2000 226 394 1.2E-80 T 13-10-2018 RPIT_13650 1a705d75271f5a375a5da3e80455dd89 152 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 13 136 6.6E-23 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain RPIT_13650 1a705d75271f5a375a5da3e80455dd89 152 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 94 126 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RPIT_13650 1a705d75271f5a375a5da3e80455dd89 152 PIRSF PIRSF006019 4 151 7.5E-40 T 13-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 RPIT_13650 1a705d75271f5a375a5da3e80455dd89 152 Gene3D G3DSA:3.40.140.10 6 149 1.7E-35 T 13-10-2018 RPIT_13650 1a705d75271f5a375a5da3e80455dd89 152 SUPERFAMILY SSF53927 14 139 6.78E-28 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 RPIT_11410 e6450c96a33b32b76e38ade7da5357f2 79 SUPERFAMILY SSF69047 6 56 3.4E-5 T 13-10-2018 IPR036629 YjbJ superfamily RPIT_09510 1bce01d0c72a01f6ff32de4ab40f30aa 196 Pfam PF09438 Domain of unknown function (DUF2017) 35 172 2.1E-11 T 13-10-2018 IPR018561 Domain of unknown function DUF2017 RPIT_11860 7062a0729b129d0005f43509d5be7d28 317 SUPERFAMILY SSF161111 19 228 1.83E-28 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily RPIT_11860 7062a0729b129d0005f43509d5be7d28 317 Gene3D G3DSA:1.20.1510.10 21 227 1.2E-20 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily RPIT_11860 7062a0729b129d0005f43509d5be7d28 317 Pfam PF01545 Cation efflux family 29 227 2.1E-15 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIT_03890 2dc20d7a32e290c22febb25c84b03412 265 Pfam PF02371 Transposase IS116/IS110/IS902 family 124 179 9.0E-6 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RPIT_11505 f48018230796ea3356a6893f23c422e0 505 Gene3D G3DSA:3.40.50.300 1 240 9.2E-56 T 13-10-2018 RPIT_11505 f48018230796ea3356a6893f23c422e0 505 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_11505 f48018230796ea3356a6893f23c422e0 505 Gene3D G3DSA:3.40.50.300 245 496 2.0E-44 T 13-10-2018 RPIT_11505 f48018230796ea3356a6893f23c422e0 505 Pfam PF00005 ABC transporter 271 425 1.7E-19 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_11505 f48018230796ea3356a6893f23c422e0 505 SUPERFAMILY SSF52540 4 229 3.48E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_11505 f48018230796ea3356a6893f23c422e0 505 SUPERFAMILY SSF52540 260 484 2.19E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_11505 f48018230796ea3356a6893f23c422e0 505 Pfam PF00005 ABC transporter 20 171 2.2E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_11505 f48018230796ea3356a6893f23c422e0 505 SMART SM00382 29 225 1.1E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_11505 f48018230796ea3356a6893f23c422e0 505 SMART SM00382 280 476 2.6E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_14440 0130383aabb36a82dad0dda53a89fd24 355 Gene3D G3DSA:3.20.20.30 1 354 1.5E-89 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 RPIT_14440 0130383aabb36a82dad0dda53a89fd24 355 SUPERFAMILY SSF51679 1 333 9.03E-72 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 RPIT_14440 0130383aabb36a82dad0dda53a89fd24 355 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 3 352 1.0E-104 T 13-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 RPIT_14440 0130383aabb36a82dad0dda53a89fd24 355 Pfam PF00296 Luciferase-like monooxygenase 1 321 5.5E-39 T 13-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIT_00660 4ec120a9abb0af82b8d211f5e88364e9 468 Pfam PF03703 Bacterial PH domain 265 322 7.3E-7 T 13-10-2018 IPR005182 Domain of unknown function DUF304 RPIT_00660 4ec120a9abb0af82b8d211f5e88364e9 468 Pfam PF03703 Bacterial PH domain 84 160 9.8E-14 T 13-10-2018 IPR005182 Domain of unknown function DUF304 RPIT_00660 4ec120a9abb0af82b8d211f5e88364e9 468 Pfam PF03703 Bacterial PH domain 385 451 1.1E-9 T 13-10-2018 IPR005182 Domain of unknown function DUF304 RPIT_00660 4ec120a9abb0af82b8d211f5e88364e9 468 PIRSF PIRSF026631 371 466 3.1E-13 T 13-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 RPIT_00660 4ec120a9abb0af82b8d211f5e88364e9 468 PIRSF PIRSF026631 25 377 3.7E-52 T 13-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 RPIT_00135 ba479d8b699cf4356cf4b05ad30c4ff9 212 SUPERFAMILY SSF50800 6 211 6.28E-52 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily RPIT_00135 ba479d8b699cf4356cf4b05ad30c4ff9 212 Gene3D G3DSA:2.40.33.20 1 212 3.8E-65 T 13-10-2018 RPIT_00135 ba479d8b699cf4356cf4b05ad30c4ff9 212 Pfam PF03473 MOSC domain 53 165 9.3E-22 T 13-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 RPIT_12445 b05e69d0c81b48ebcafed894f5952f15 255 Gene3D G3DSA:1.20.1260.10 30 181 2.0E-43 T 13-10-2018 IPR012347 Ferritin-like RPIT_12445 b05e69d0c81b48ebcafed894f5952f15 255 SUPERFAMILY SSF47240 40 175 6.19E-13 T 13-10-2018 IPR009078 Ferritin-like superfamily RPIT_12445 b05e69d0c81b48ebcafed894f5952f15 255 Pfam PF09968 Uncharacterized protein domain (DUF2202) 35 172 1.2E-34 T 13-10-2018 IPR019243 Domain of unknown function DUF2202 RPIT_10415 7c2256e9ccb758b59d99c8efb35285f0 173 Gene3D G3DSA:3.40.50.300 1 172 1.7E-26 T 13-10-2018 RPIT_10415 7c2256e9ccb758b59d99c8efb35285f0 173 SUPERFAMILY SSF52540 3 171 1.31E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_10415 7c2256e9ccb758b59d99c8efb35285f0 173 Pfam PF13671 AAA domain 5 139 1.8E-14 T 13-10-2018 RPIT_11635 75c390b4921ddb664e1a512a4ead972a 530 Gene3D G3DSA:3.40.190.10 178 525 1.5E-115 T 13-10-2018 RPIT_11635 75c390b4921ddb664e1a512a4ead972a 530 Gene3D G3DSA:3.40.190.10 79 431 1.5E-115 T 13-10-2018 RPIT_11635 75c390b4921ddb664e1a512a4ead972a 530 SUPERFAMILY SSF53850 22 528 1.6E-79 T 13-10-2018 RPIT_11635 75c390b4921ddb664e1a512a4ead972a 530 Pfam PF01547 Bacterial extracellular solute-binding protein 71 371 1.6E-12 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein RPIT_00530 3f0c2c142e5054f83cc1698638403125 259 SMART SM00382 57 229 2.8E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_00530 3f0c2c142e5054f83cc1698638403125 259 Gene3D G3DSA:3.40.50.300 35 252 1.1E-45 T 13-10-2018 RPIT_00530 3f0c2c142e5054f83cc1698638403125 259 Pfam PF00005 ABC transporter 48 180 9.3E-18 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_00530 3f0c2c142e5054f83cc1698638403125 259 SUPERFAMILY SSF52540 33 241 4.72E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_00530 3f0c2c142e5054f83cc1698638403125 259 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_08460 27c8f23f2365b8bdfbe2ad44e8dffc13 219 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_08460 27c8f23f2365b8bdfbe2ad44e8dffc13 219 SMART SM00382 34 217 2.6E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_08460 27c8f23f2365b8bdfbe2ad44e8dffc13 219 Gene3D G3DSA:3.40.50.300 4 219 2.3E-59 T 13-10-2018 RPIT_08460 27c8f23f2365b8bdfbe2ad44e8dffc13 219 Pfam PF00005 ABC transporter 26 175 3.3E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_08460 27c8f23f2365b8bdfbe2ad44e8dffc13 219 SUPERFAMILY SSF52540 7 217 2.34E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_02700 1ece92af9700cee8e69621153da924ea 310 Pfam PF00348 Polyprenyl synthetase 21 260 9.3E-59 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 RPIT_02700 1ece92af9700cee8e69621153da924ea 310 Gene3D G3DSA:1.10.600.10 2 310 6.0E-98 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily RPIT_02700 1ece92af9700cee8e69621153da924ea 310 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 192 204 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site RPIT_02700 1ece92af9700cee8e69621153da924ea 310 SUPERFAMILY SSF48576 6 309 3.45E-78 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily RPIT_03900 3a9e0c4eb833b0824c5e52cb8062c3fe 315 SUPERFAMILY SSF56112 32 289 3.06E-10 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily RPIT_03900 3a9e0c4eb833b0824c5e52cb8062c3fe 315 Pfam PF01636 Phosphotransferase enzyme family 126 246 1.1E-5 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase RPIT_03900 3a9e0c4eb833b0824c5e52cb8062c3fe 315 Gene3D G3DSA:3.90.1200.10 164 312 3.9E-6 T 13-10-2018 RPIT_14830 3081fbad0cc82307b6bb0a4071a6de29 221 Pfam PF03006 Haemolysin-III related 9 211 1.4E-39 T 13-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 RPIT_13255 71e6b6ca33ed8087aa05cb383ce4c74d 159 Pfam PF11188 Protein of unknown function (DUF2975) 36 159 4.6E-19 T 13-10-2018 IPR021354 Protein of unknown function DUF2975 RPIT_06285 8890595c0351bd724a1deac103505989 414 Pfam PF03993 Domain of Unknown Function (DUF349) 249 323 5.1E-18 T 13-10-2018 IPR007139 Protein of unknown function DUF349 RPIT_06285 8890595c0351bd724a1deac103505989 414 Pfam PF03993 Domain of Unknown Function (DUF349) 95 167 5.2E-11 T 13-10-2018 IPR007139 Protein of unknown function DUF349 RPIT_06285 8890595c0351bd724a1deac103505989 414 Pfam PF03993 Domain of Unknown Function (DUF349) 172 244 3.5E-20 T 13-10-2018 IPR007139 Protein of unknown function DUF349 RPIT_09540 39c5e4c0ce5fb79e8f5932ede4dadf9f 241 Pfam PF10708 Protein of unknown function (DUF2510) 10 42 7.8E-9 T 13-10-2018 IPR018929 Domain of unknown function DUF2510 RPIT_09540 39c5e4c0ce5fb79e8f5932ede4dadf9f 241 Pfam PF06271 RDD family 77 234 1.5E-16 T 13-10-2018 IPR010432 RDD RPIT_11625 e65b399b062a534182eaa32ff5fbfe32 554 Gene3D G3DSA:3.40.50.300 390 552 5.9E-7 T 13-10-2018 RPIT_11625 e65b399b062a534182eaa32ff5fbfe32 554 SUPERFAMILY SSF52540 208 536 4.15E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_11625 e65b399b062a534182eaa32ff5fbfe32 554 Pfam PF08378 Nuclease-related domain 14 113 5.2E-9 T 13-10-2018 IPR011528 Nuclease-related domain, NERD RPIT_11625 e65b399b062a534182eaa32ff5fbfe32 554 Gene3D G3DSA:3.40.50.300 198 380 1.7E-14 T 13-10-2018 RPIT_06065 ddb545c2904c797512073775217a8eed 354 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 99 5.2E-10 T 13-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 RPIT_06065 ddb545c2904c797512073775217a8eed 354 Gene3D G3DSA:3.40.50.720 2 149 4.4E-25 T 13-10-2018 RPIT_06065 ddb545c2904c797512073775217a8eed 354 SUPERFAMILY SSF51735 1 134 7.79E-18 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_02935 423608f3f235e436a65ee112fc82693f 382 Gene3D G3DSA:3.40.50.2300 156 372 1.3E-128 T 13-10-2018 RPIT_02935 423608f3f235e436a65ee112fc82693f 382 SUPERFAMILY SSF53822 52 361 2.36E-69 T 13-10-2018 IPR028082 Periplasmic binding protein-like I RPIT_02935 423608f3f235e436a65ee112fc82693f 382 Gene3D G3DSA:3.40.50.2300 54 351 1.3E-128 T 13-10-2018 RPIT_02935 423608f3f235e436a65ee112fc82693f 382 Pfam PF13407 Periplasmic binding protein domain 54 329 4.6E-68 T 13-10-2018 IPR025997 Periplasmic binding protein RPIT_01890 ca973ec854b3db569bbef41b973585a4 282 SUPERFAMILY SSF161098 2 282 1.31E-59 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_01890 ca973ec854b3db569bbef41b973585a4 282 Gene3D G3DSA:1.10.3720.10 2 269 1.3E-49 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_01890 ca973ec854b3db569bbef41b973585a4 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 272 1.3E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_09135 a1c1f198c62b2f6a15f26f24d9bcd8e1 79 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 7 67 3.8E-14 T 13-10-2018 IPR018691 Protein of unknown function DUF2188 RPIT_07390 26683f922352c394076a1930a1ca32b5 527 Pfam PF00106 short chain dehydrogenase 157 246 6.0E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_07390 26683f922352c394076a1930a1ca32b5 527 SUPERFAMILY SSF51735 153 472 7.54E-26 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_07390 26683f922352c394076a1930a1ca32b5 527 Gene3D G3DSA:3.40.50.720 282 506 1.6E-13 T 13-10-2018 RPIT_07390 26683f922352c394076a1930a1ca32b5 527 Gene3D G3DSA:3.40.50.720 143 262 1.1E-18 T 13-10-2018 RPIT_07080 256d2993296afe2297c8999fdafbdee6 167 Pfam PF02631 RecX family 35 154 1.0E-26 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 RPIT_07080 256d2993296afe2297c8999fdafbdee6 167 Gene3D G3DSA:1.10.10.10 58 103 1.5E-12 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily RPIT_07080 256d2993296afe2297c8999fdafbdee6 167 Hamap MF_01114 Regulatory protein RecX [recX]. 6 159 14.13 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 RPIT_02745 8cb8ddf4ec9ce86e5cfabcfe1d7b31b3 171 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 4 114 9.2E-20 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02745 8cb8ddf4ec9ce86e5cfabcfe1d7b31b3 171 Gene3D G3DSA:3.30.460.80 2 94 2.6E-15 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02745 8cb8ddf4ec9ce86e5cfabcfe1d7b31b3 171 SUPERFAMILY SSF143243 5 121 1.14E-22 T 13-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02745 8cb8ddf4ec9ce86e5cfabcfe1d7b31b3 171 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 52 107 2.0E-5 T 13-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_04895 3325f5f99977d55c12c6ef89f3b970a4 236 SMART SM00382 30 213 6.1E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_04895 3325f5f99977d55c12c6ef89f3b970a4 236 SUPERFAMILY SSF52540 4 225 4.54E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_04895 3325f5f99977d55c12c6ef89f3b970a4 236 Pfam PF00005 ABC transporter 21 156 4.3E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_04895 3325f5f99977d55c12c6ef89f3b970a4 236 Gene3D G3DSA:3.40.50.300 1 231 4.1E-46 T 13-10-2018 RPIT_00185 cbdf78573fdf8de7a011fa15d7fb2321 66 Gene3D G3DSA:3.10.180.10 6 66 2.3E-11 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_00185 cbdf78573fdf8de7a011fa15d7fb2321 66 SUPERFAMILY SSF54593 21 66 5.17E-7 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_06615 95bbcd126395e020027bb3624ac4c26d 382 Pfam PF01594 AI-2E family transporter 58 371 2.5E-51 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like RPIT_00540 32740daa485d14e514c4cb8941fb9a27 348 Pfam PF02371 Transposase IS116/IS110/IS902 family 231 312 7.8E-20 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RPIT_00540 32740daa485d14e514c4cb8941fb9a27 348 Pfam PF01548 Transposase 12 160 2.5E-16 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RPIT_13390 32740daa485d14e514c4cb8941fb9a27 348 Pfam PF02371 Transposase IS116/IS110/IS902 family 231 312 7.8E-20 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 RPIT_13390 32740daa485d14e514c4cb8941fb9a27 348 Pfam PF01548 Transposase 12 160 2.5E-16 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 RPIT_02230 441ee288c84c479af5d0ab813d620864 275 Pfam PF14355 Abortive infection C-terminus 192 274 8.9E-8 T 13-10-2018 IPR026001 Abortive infection protein-like, C-terminal domain RPIT_13955 9812a449c8a2e40ea1e588b1b31265a6 255 SUPERFAMILY SSF53795 84 148 6.59E-7 T 13-10-2018 RPIT_11155 b7e6f628c8feecca57ec034379165052 172 Pfam PF05481 Mycobacterium 19 kDa lipoprotein antigen 57 169 1.0E-9 T 13-10-2018 IPR008691 19kDa lipoprotein antigen GO:0016020 RPIT_02675 befbcb87399af1bd3eb68a145377bb3f 273 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 25 173 1.7E-28 T 13-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_02675 befbcb87399af1bd3eb68a145377bb3f 273 Gene3D G3DSA:1.20.120.1200 13 176 1.2E-36 T 13-10-2018 RPIT_04190 83948f7c39b6342468d9e57ad00ec406 209 Pfam PF02361 Cobalt transport protein 19 201 6.6E-7 T 13-10-2018 IPR003339 ABC/ECF transporter, transmembrane component RPIT_08745 74d6f914acdae6276c0375459e128126 499 Gene3D G3DSA:3.40.140.40 346 491 4.9E-57 T 13-10-2018 RPIT_08745 74d6f914acdae6276c0375459e128126 499 Hamap MF_01567 UPF0371 protein . 5 499 57.721 T 13-10-2018 IPR014999 Uncharacterised protein family UPF0371 RPIT_08745 74d6f914acdae6276c0375459e128126 499 Gene3D G3DSA:1.20.1570.10 212 339 5.1E-166 T 13-10-2018 RPIT_08745 74d6f914acdae6276c0375459e128126 499 Pfam PF08903 Domain of unknown function (DUF1846) 7 496 7.2E-245 T 13-10-2018 IPR014999 Uncharacterised protein family UPF0371 RPIT_08745 74d6f914acdae6276c0375459e128126 499 Gene3D G3DSA:3.10.630.10 7 289 5.1E-166 T 13-10-2018 RPIT_08745 74d6f914acdae6276c0375459e128126 499 PIRSF PIRSF033132 5 499 1.8E-249 T 13-10-2018 IPR014999 Uncharacterised protein family UPF0371 RPIT_00890 aa762366c4898a8d875d9a217cf03bdf 159 SUPERFAMILY SSF54631 25 126 2.15E-11 T 13-10-2018 RPIT_00890 aa762366c4898a8d875d9a217cf03bdf 159 Gene3D G3DSA:3.10.580.10 22 129 1.2E-8 T 13-10-2018 RPIT_00890 aa762366c4898a8d875d9a217cf03bdf 159 Pfam PF00571 CBS domain 27 77 8.8E-4 T 13-10-2018 IPR000644 CBS domain RPIT_14625 fde27672c31d6681b22ff9d166022c0f 70 Gene3D G3DSA:1.10.1220.180 1 70 2.2E-15 T 13-10-2018 RPIT_12085 e23756aa99ce31d519c255f4d08f7946 398 SUPERFAMILY SSF53300 9 217 8.89E-5 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily RPIT_07955 4e23b48b960b42d8a3c665b767ee3ac5 195 SUPERFAMILY SSF55729 5 176 6.6E-39 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_07955 4e23b48b960b42d8a3c665b767ee3ac5 195 Gene3D G3DSA:3.40.630.30 2 190 1.1E-43 T 13-10-2018 RPIT_07955 4e23b48b960b42d8a3c665b767ee3ac5 195 Pfam PF13302 Acetyltransferase (GNAT) domain 11 153 9.7E-26 T 13-10-2018 IPR000182 GNAT domain RPIT_12885 5bb11c12de77910771e0310634e6984e 190 SUPERFAMILY SSF46689 4 68 8.72E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_12885 5bb11c12de77910771e0310634e6984e 190 Gene3D G3DSA:1.10.357.10 6 165 3.3E-15 T 13-10-2018 RPIT_12885 5bb11c12de77910771e0310634e6984e 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 2.0E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIT_11500 b1c31b6a44788c97badc10df9f482355 319 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 306 6.6E-45 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 RPIT_01660 c3cf80e8cc3756242c8d3e69006c8cd6 211 Pfam PF13468 Glyoxalase-like domain 4 173 1.8E-31 T 13-10-2018 IPR025870 Glyoxalase-like domain RPIT_01660 c3cf80e8cc3756242c8d3e69006c8cd6 211 Gene3D G3DSA:3.10.180.10 1 152 7.4E-11 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_11075 bedf8ec59f3c79ad8300a8f69feb07ab 93 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 23 91 1.7E-21 T 13-10-2018 IPR018720 Domain of unknown function DUF2249 RPIT_13315 333b070540652a346dc016864d48ccff 252 Pfam PF06904 Extensin-like protein C-terminus 108 176 2.0E-6 T 13-10-2018 IPR009683 Extensin-like, C-terminal RPIT_12275 9cbaf952850c20f1d9a7138847954de4 254 Pfam PF14256 YwiC-like protein 10 140 1.4E-33 T 13-10-2018 IPR025576 YwiC-like protein RPIT_11420 fee683c12d8bfdea86da2efeb011edb0 368 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 242 270 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIT_11420 fee683c12d8bfdea86da2efeb011edb0 368 SUPERFAMILY SSF51735 101 365 1.09E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_11420 fee683c12d8bfdea86da2efeb011edb0 368 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 255 274 8.6E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_11420 fee683c12d8bfdea86da2efeb011edb0 368 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 276 293 8.6E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_11420 fee683c12d8bfdea86da2efeb011edb0 368 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 104 121 8.6E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_11420 fee683c12d8bfdea86da2efeb011edb0 368 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 187 8.6E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_11420 fee683c12d8bfdea86da2efeb011edb0 368 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 329 349 8.6E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_11420 fee683c12d8bfdea86da2efeb011edb0 368 Gene3D G3DSA:3.40.50.720 91 367 1.6E-55 T 13-10-2018 RPIT_11420 fee683c12d8bfdea86da2efeb011edb0 368 Pfam PF00106 short chain dehydrogenase 103 288 4.8E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RPIT_01625 54bdeae16fba574bc6f044eed58c728c 323 Pfam PF00005 ABC transporter 20 159 2.9E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIT_01625 54bdeae16fba574bc6f044eed58c728c 323 SUPERFAMILY SSF52540 4 238 7.02E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01625 54bdeae16fba574bc6f044eed58c728c 323 SMART SM00382 28 209 5.6E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain RPIT_01625 54bdeae16fba574bc6f044eed58c728c 323 Gene3D G3DSA:3.40.50.300 2 235 1.2E-68 T 13-10-2018 RPIT_01625 54bdeae16fba574bc6f044eed58c728c 323 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIT_09550 06b94c7539e7cdc2561083d29a364a3c 80 Pfam PF11238 Protein of unknown function (DUF3039) 21 76 2.7E-30 T 13-10-2018 IPR021400 Protein of unknown function DUF3039 RPIT_10060 26f25ef0baf5223bb418af12027695d5 378 Pfam PF00534 Glycosyl transferases group 1 194 344 2.3E-21 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 RPIT_10060 26f25ef0baf5223bb418af12027695d5 378 Gene3D G3DSA:3.40.50.2000 179 349 1.6E-59 T 13-10-2018 RPIT_10060 26f25ef0baf5223bb418af12027695d5 378 Pfam PF13439 Glycosyltransferase Family 4 14 180 2.6E-23 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 RPIT_10060 26f25ef0baf5223bb418af12027695d5 378 Gene3D G3DSA:3.40.50.2000 5 178 1.6E-59 T 13-10-2018 RPIT_10060 26f25ef0baf5223bb418af12027695d5 378 SUPERFAMILY SSF53756 2 367 8.46E-67 T 13-10-2018 RPIT_10825 640c32f68ceccbc752ec1016793405bb 279 Gene3D G3DSA:3.30.70.20 143 212 8.8E-10 T 13-10-2018 RPIT_10825 640c32f68ceccbc752ec1016793405bb 279 SUPERFAMILY SSF54862 136 201 2.3E-13 T 13-10-2018 RPIT_10825 640c32f68ceccbc752ec1016793405bb 279 Pfam PF12838 4Fe-4S dicluster domain 152 199 1.8E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIT_10825 640c32f68ceccbc752ec1016793405bb 279 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 152 163 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIT_11010 1793e0c55621eb92a5bfbe16d0b377e9 899 Pfam PF03200 Glycosyl hydrolase family 63 C-terminal domain 573 882 2.8E-5 T 13-10-2018 IPR031335 Glycosyl hydrolase family 63, C-terminal KEGG: 00510+3.2.1.106|MetaCyc: PWY-7918|MetaCyc: PWY-7919|Reactome: R-HSA-4793954|Reactome: R-HSA-532668 RPIT_11010 1793e0c55621eb92a5bfbe16d0b377e9 899 SUPERFAMILY SSF48208 440 884 4.01E-45 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 RPIT_01205 69867e396f305a333e984611e5026eb0 104 PIRSF PIRSF004555 3 103 7.9E-29 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family RPIT_01205 69867e396f305a333e984611e5026eb0 104 SUPERFAMILY SSF82607 7 96 1.44E-24 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily RPIT_01205 69867e396f305a333e984611e5026eb0 104 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 97 18.934 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family RPIT_01205 69867e396f305a333e984611e5026eb0 104 Gene3D G3DSA:3.30.1310.10 1 103 6.1E-30 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily RPIT_01205 69867e396f305a333e984611e5026eb0 104 Pfam PF02575 YbaB/EbfC DNA-binding family 11 96 3.1E-29 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family RPIT_01205 69867e396f305a333e984611e5026eb0 104 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 102 1.5E-22 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family RPIT_12865 e9f42da22a3783e71e8943015eb3b620 349 Pfam PF13810 Domain of unknown function (DUF4185) 23 304 2.7E-24 T 13-10-2018 IPR025442 Domain of unknown function DUF4185 RPIT_10475 1d494df4f7c9f91c59e7d09e9c5dd0a4 340 Gene3D G3DSA:1.10.3470.10 14 336 2.4E-61 T 13-10-2018 IPR037294 ABC transporter, BtuC-like RPIT_10475 1d494df4f7c9f91c59e7d09e9c5dd0a4 340 SUPERFAMILY SSF81345 19 333 5.62E-63 T 13-10-2018 IPR037294 ABC transporter, BtuC-like RPIT_10475 1d494df4f7c9f91c59e7d09e9c5dd0a4 340 Pfam PF01032 FecCD transport family 31 333 7.1E-62 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 RPIT_10305 7b440546f0777f872f217c70608bb08f 60 Pfam PF17227 Family of unknown function (DUF5302) 11 59 2.9E-10 T 13-10-2018 IPR035172 Protein of unknown function DUF5302 RPIT_04420 dc1cbf70377fe73d837b3a95b96fddbe 251 Pfam PF02104 SURF1 family 17 216 7.5E-26 T 13-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RPIT_05325 ff99b13208118778a398d6345f4ca6d8 188 SUPERFAMILY SSF143456 7 181 8.5E-36 T 13-10-2018 RPIT_05325 ff99b13208118778a398d6345f4ca6d8 188 Pfam PF02622 Uncharacterized ACR, COG1678 23 172 1.7E-27 T 13-10-2018 IPR003774 Protein of unknown function UPF0301 RPIT_05325 ff99b13208118778a398d6345f4ca6d8 188 Gene3D G3DSA:3.40.1740.10 2 179 1.1E-43 T 13-10-2018 RPIT_09835 d9b592339eefc5456471bee94a6c6002 94 Pfam PF11222 Protein of unknown function (DUF3017) 16 88 6.8E-20 T 13-10-2018 IPR021385 Protein of unknown function DUF3017 RPIT_05980 56e5e3c20606981e3a16da1e4ce4e08f 164 Pfam PF04186 FxsA cytoplasmic membrane protein 14 116 1.6E-28 T 13-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 RPIT_07195 33d35a88152842f6f101591e64e0e052 185 SUPERFAMILY SSF55729 5 173 3.96E-39 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_07195 33d35a88152842f6f101591e64e0e052 185 Gene3D G3DSA:3.40.630.30 1 162 8.8E-43 T 13-10-2018 RPIT_07195 33d35a88152842f6f101591e64e0e052 185 Pfam PF13302 Acetyltransferase (GNAT) domain 10 151 2.4E-30 T 13-10-2018 IPR000182 GNAT domain RPIT_06950 85727e5b898cb7ccfc7d57c6eea30ded 333 Gene3D G3DSA:2.160.20.20 24 201 4.0E-8 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily RPIT_13795 9e0000c1efdd0b09c4ac6cd2a586c4d2 284 Pfam PF01522 Polysaccharide deacetylase 87 201 1.1E-21 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIT_13795 9e0000c1efdd0b09c4ac6cd2a586c4d2 284 SUPERFAMILY SSF88713 55 213 2.75E-26 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIT_13795 9e0000c1efdd0b09c4ac6cd2a586c4d2 284 Gene3D G3DSA:3.20.20.370 27 251 1.4E-46 T 13-10-2018 RPIT_13190 18342d6abcf1971060bf23f907260177 298 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 169 194 - T 13-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 RPIT_13190 18342d6abcf1971060bf23f907260177 298 Gene3D G3DSA:1.10.600.10 1 289 3.7E-82 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily RPIT_13190 18342d6abcf1971060bf23f907260177 298 SUPERFAMILY SSF48576 8 291 5.97E-76 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily RPIT_13190 18342d6abcf1971060bf23f907260177 298 Pfam PF00494 Squalene/phytoene synthase 17 278 9.0E-65 T 13-10-2018 RPIT_06785 bd53fc93c0ab9bf876efeb1e03f1a28c 83 Pfam PF02467 Transcription factor WhiB 3 71 1.2E-26 T 13-10-2018 IPR034768 WhiB-like iron-sulfur binding domain RPIT_06785 bd53fc93c0ab9bf876efeb1e03f1a28c 83 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 76 18.486 T 13-10-2018 IPR003482 Transcription factor WhiB RPIT_13015 92559ee549084476120ab16bca059413 399 Gene3D G3DSA:1.20.1250.20 1 388 1.8E-31 T 13-10-2018 RPIT_13015 92559ee549084476120ab16bca059413 399 SUPERFAMILY SSF103473 23 386 2.09E-36 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_13015 92559ee549084476120ab16bca059413 399 Pfam PF07690 Major Facilitator Superfamily 44 343 3.7E-20 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIT_00510 deec8c7d3ffd89c9a20105c2f13ebffe 138 Pfam PF08818 Domain of unknown function (DU1801) 12 114 4.1E-10 T 13-10-2018 IPR014922 Domain of unknown function DUF1801 RPIT_01470 29364bc0e7fdd8f7c5ffd90d688a3473 237 Gene3D G3DSA:2.30.110.10 10 233 2.6E-45 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 RPIT_01470 29364bc0e7fdd8f7c5ffd90d688a3473 237 Pfam PF04299 Putative FMN-binding domain 11 190 2.8E-31 T 13-10-2018 IPR007396 Transcriptional regulator PAI 2-type RPIT_01470 29364bc0e7fdd8f7c5ffd90d688a3473 237 PIRSF PIRSF010372 10 233 1.1E-33 T 13-10-2018 IPR007396 Transcriptional regulator PAI 2-type RPIT_01470 29364bc0e7fdd8f7c5ffd90d688a3473 237 SUPERFAMILY SSF50475 20 217 1.49E-25 T 13-10-2018 RPIT_10995 f929bf6039c488fa31ae083e153e8747 364 Gene3D G3DSA:3.30.9.10 87 291 7.2E-11 T 13-10-2018 RPIT_10995 f929bf6039c488fa31ae083e153e8747 364 SUPERFAMILY SSF51905 3 347 2.33E-16 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_10995 f929bf6039c488fa31ae083e153e8747 364 Gene3D G3DSA:3.50.50.60 6 330 7.2E-11 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_10995 f929bf6039c488fa31ae083e153e8747 364 Pfam PF01266 FAD dependent oxidoreductase 4 329 8.3E-12 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIT_07310 df4ceab35d102454c0bb68b8ea468ccd 93 Gene3D G3DSA:1.20.58.1000 4 93 7.1E-26 T 13-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily RPIT_07310 df4ceab35d102454c0bb68b8ea468ccd 93 Pfam PF02583 Metal-sensitive transcriptional repressor 8 88 2.5E-22 T 13-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 RPIT_12185 3ebb320996435625574082eadec0c3a2 487 SUPERFAMILY SSF49879 387 475 2.29E-10 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 RPIT_12185 3ebb320996435625574082eadec0c3a2 487 Pfam PF00498 FHA domain 395 464 2.6E-6 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 RPIT_12185 3ebb320996435625574082eadec0c3a2 487 Gene3D G3DSA:2.60.200.20 377 474 2.5E-11 T 13-10-2018 RPIT_09110 fb760746adc9d45245c95c875b953be3 319 Gene3D G3DSA:3.10.270.10 36 309 1.7E-47 T 13-10-2018 RPIT_09110 fb760746adc9d45245c95c875b953be3 319 Pfam PF02649 Type I GTP cyclohydrolase folE2 52 305 2.7E-36 T 13-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 RPIT_03410 548059cef3f709c9e7e013a1bcf0a573 639 Pfam PF01757 Acyltransferase family 12 348 1.3E-20 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 RPIT_04515 83426850fc754110722185ad62d3308d 286 Pfam PF01148 Cytidylyltransferase family 22 282 9.2E-55 T 13-10-2018 RPIT_04515 83426850fc754110722185ad62d3308d 286 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 241 267 - T 13-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 RPIT_14175 07668f8067263fa0b8551b59d54acb67 451 Pfam PF11700 Vacuole effluxer Atg22 like 151 390 4.9E-29 T 13-10-2018 IPR024671 Autophagy-related protein 22-like RPIT_14175 07668f8067263fa0b8551b59d54acb67 451 SUPERFAMILY SSF103473 17 430 1.7E-33 T 13-10-2018 IPR036259 MFS transporter superfamily RPIT_14175 07668f8067263fa0b8551b59d54acb67 451 Gene3D G3DSA:1.20.1250.20 18 214 7.4E-11 T 13-10-2018 RPIT_14175 07668f8067263fa0b8551b59d54acb67 451 Gene3D G3DSA:1.20.1250.20 235 434 1.6E-12 T 13-10-2018 RPIT_06345 299397f719b1638363df43c39bc452de 200 SUPERFAMILY SSF69593 57 155 1.05E-5 T 13-10-2018 RPIT_04340 b1b41303aa019fefa2f4c5d465665e1a 480 Pfam PF01458 Uncharacterized protein family (UPF0051) 226 451 2.9E-74 T 13-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 RPIT_04340 b1b41303aa019fefa2f4c5d465665e1a 480 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 24 471 6.2E-219 T 13-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 RPIT_04340 b1b41303aa019fefa2f4c5d465665e1a 480 SUPERFAMILY SSF101960 47 477 9.02E-138 T 13-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily RPIT_12190 b051d4de8f971b8580e73e94032eae9f 377 Gene3D G3DSA:3.90.1150.10 18 361 9.4E-104 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_12190 b051d4de8f971b8580e73e94032eae9f 377 Gene3D G3DSA:3.40.640.10 56 265 9.4E-104 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_12190 b051d4de8f971b8580e73e94032eae9f 377 SUPERFAMILY SSF53383 22 367 5.78E-62 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_12190 b051d4de8f971b8580e73e94032eae9f 377 Pfam PF00155 Aminotransferase class I and II 60 361 1.6E-25 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIT_05110 c7b11d193e7755a01143836e5b440cdf 120 Pfam PF04341 Protein of unknown function, DUF485 24 111 1.0E-26 T 13-10-2018 IPR007436 Protein of unknown function DUF485 RPIT_05710 599d8724f284900de4fccef10c342e3c 195 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 59 81 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RPIT_05710 599d8724f284900de4fccef10c342e3c 195 Pfam PF01066 CDP-alcohol phosphatidyltransferase 18 81 7.4E-15 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RPIT_05710 599d8724f284900de4fccef10c342e3c 195 Gene3D G3DSA:1.20.120.1760 5 187 1.1E-11 T 13-10-2018 RPIT_05710 599d8724f284900de4fccef10c342e3c 195 PIRSF PIRSF000847 13 195 5.3E-43 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 RPIT_05540 92ac96bd799633d5ba4fbc9ab9443ee7 97 Pfam PF14019 Protein of unknown function (DUF4235) 9 80 2.2E-22 T 13-10-2018 IPR025329 Protein of unknown function DUF4235 RPIT_03435 4f1a7413690aafa1bb95c0cd64ae8cfd 127 PIRSF PIRSF028777 1 126 1.6E-44 T 13-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 RPIT_03435 4f1a7413690aafa1bb95c0cd64ae8cfd 127 Pfam PF03733 Inner membrane component domain 4 54 9.0E-20 T 13-10-2018 IPR005185 Inner membrane component domain RPIT_03435 4f1a7413690aafa1bb95c0cd64ae8cfd 127 Pfam PF03733 Inner membrane component domain 68 118 1.4E-12 T 13-10-2018 IPR005185 Inner membrane component domain RPIT_03210 2434399f4d647fdc79854ae986ed45ec 292 Pfam PF04228 Putative neutral zinc metallopeptidase 120 234 2.9E-6 T 13-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative RPIT_13885 38faf76dd6fe62c9e378da123a181384 215 Pfam PF02397 Bacterial sugar transferase 7 197 3.4E-50 T 13-10-2018 IPR003362 Bacterial sugar transferase RPIT_02480 25a383bda9918715da01eedbb1d239bf 459 Pfam PF08239 Bacterial SH3 domain 46 95 7.3E-12 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type RPIT_02480 25a383bda9918715da01eedbb1d239bf 459 SMART SM00287 35 98 1.6E-9 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type RPIT_02480 25a383bda9918715da01eedbb1d239bf 459 SMART SM00287 112 176 0.077 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type RPIT_02480 25a383bda9918715da01eedbb1d239bf 459 Gene3D G3DSA:2.30.30.40 112 178 2.4E-10 T 13-10-2018 RPIT_02480 25a383bda9918715da01eedbb1d239bf 459 Gene3D G3DSA:2.30.30.40 36 100 1.8E-15 T 13-10-2018 RPIT_12660 cbd7861700377ef73b03188a43aeb29d 85 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 23 81 5.3E-6 T 13-10-2018 IPR008792 Coenzyme PQQ synthesis D RPIT_12660 cbd7861700377ef73b03188a43aeb29d 85 Gene3D G3DSA:1.10.10.1150 8 83 4.5E-5 T 13-10-2018 RPIT_00695 472690558ae21b669160dd6ef32372d9 327 Pfam PF04018 Domain of unknown function (DUF368) 33 254 1.6E-36 T 13-10-2018 IPR007163 Protein of unknown function DUF368 RPIT_07355 278179df8861e9d0c2079ae9c859df25 137 Gene3D G3DSA:3.40.50.1010 2 123 6.6E-12 T 13-10-2018 RPIT_07355 278179df8861e9d0c2079ae9c859df25 137 SUPERFAMILY SSF88723 3 120 4.71E-7 T 13-10-2018 IPR029060 PIN-like domain superfamily RPIT_08530 2b258970d30c0266248beb0f1d7f5d04 495 SUPERFAMILY SSF48239 141 295 2.62E-16 T 13-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RPIT_08530 2b258970d30c0266248beb0f1d7f5d04 495 Gene3D G3DSA:1.50.10.20 101 263 6.4E-13 T 13-10-2018 RPIT_11040 5108a51621cef5924e9fd2d6061e9db2 205 SMART SM00858 42 104 3.8E-7 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 RPIT_11040 5108a51621cef5924e9fd2d6061e9db2 205 Pfam PF08666 SAF domain 43 99 6.9E-7 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 RPIT_05115 d4ba69ceb8c7d90b1de88bb8233fe492 531 Gene3D G3DSA:1.20.1730.10 29 489 1.7E-51 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily RPIT_05115 d4ba69ceb8c7d90b1de88bb8233fe492 531 Pfam PF00474 Sodium:solute symporter family 41 448 6.0E-86 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 RPIT_14065 8fc6c8845839d02e227ead91492b5a45 94 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 32 90 8.1E-7 T 13-10-2018 IPR008792 Coenzyme PQQ synthesis D RPIT_14455 969f0359f682921cb4d68b4f8cfa0a1e 197 Pfam PF01899 Na+/H+ ion antiporter subunit 21 167 2.0E-30 T 13-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 RPIT_08320 be45b85c3dc67d966216307e3b0777d1 175 Pfam PF11290 Protein of unknown function (DUF3090) 7 163 2.8E-49 T 13-10-2018 IPR021441 Protein of unknown function DUF3090 RPIT_08320 be45b85c3dc67d966216307e3b0777d1 175 TIGRFAM TIGR03847 TIGR03847: conserved hypothetical protein 6 167 1.6E-50 T 13-10-2018 IPR021441 Protein of unknown function DUF3090 RPIT_13335 758f3707df4ab164cbe252c268f0b6aa 113 Pfam PF09966 Uncharacterized protein conserved in bacteria (DUF2200) 3 112 1.3E-52 T 13-10-2018 IPR014580 Uncharacterised conserved protein UCP033199 RPIT_13335 758f3707df4ab164cbe252c268f0b6aa 113 PIRSF PIRSF033199 1 113 8.0E-51 T 13-10-2018 IPR014580 Uncharacterised conserved protein UCP033199 RPIT_13335 758f3707df4ab164cbe252c268f0b6aa 113 Gene3D G3DSA:1.10.8.290 1 113 3.6E-52 T 13-10-2018 IPR023204 SP1917 domain superfamily RPIT_02265 e5031a9fe533a9a4a88baed61b1f6614 96 Pfam PF01527 Transposase 4 82 7.1E-17 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RPIT_02265 e5031a9fe533a9a4a88baed61b1f6614 96 Gene3D G3DSA:1.10.10.60 9 93 8.8E-14 T 13-10-2018 RPIT_02265 e5031a9fe533a9a4a88baed61b1f6614 96 SUPERFAMILY SSF46689 4 93 7.17E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 RPIT_09665 bf6676d5ff8208f1cf06eaeb9ec8c23c 201 Pfam PF02545 Maf-like protein 4 187 1.1E-41 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 RPIT_09665 bf6676d5ff8208f1cf06eaeb9ec8c23c 201 PIRSF PIRSF006305 1 193 9.5E-41 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 RPIT_09665 bf6676d5ff8208f1cf06eaeb9ec8c23c 201 Hamap MF_00528 Septum formation protein Maf [maf]. 4 194 25.804 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 RPIT_09665 bf6676d5ff8208f1cf06eaeb9ec8c23c 201 SUPERFAMILY SSF52972 2 187 2.03E-48 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like RPIT_09665 bf6676d5ff8208f1cf06eaeb9ec8c23c 201 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 185 4.2E-42 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 RPIT_09665 bf6676d5ff8208f1cf06eaeb9ec8c23c 201 Gene3D G3DSA:3.90.950.10 3 194 5.3E-54 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like RPIT_13135 af4e1fac2fc03a70e080d466f991b805 223 Gene3D G3DSA:1.10.287.700 128 222 4.8E-5 T 13-10-2018 RPIT_13135 af4e1fac2fc03a70e080d466f991b805 223 SUPERFAMILY SSF58113 130 214 3.53E-5 T 13-10-2018 RPIT_13135 af4e1fac2fc03a70e080d466f991b805 223 Pfam PF12277 Protein of unknown function (DUF3618) 3 46 1.7E-14 T 13-10-2018 IPR022062 Protein of unknown function DUF3618 RPIT_05850 5e11ca773557ad8e4f3a2c5e1671007c 185 Pfam PF07853 Protein of unknown function (DUF1648) 24 68 3.4E-11 T 13-10-2018 IPR012867 Domain of unknown function DUF1648 RPIT_08430 b5457b77a3c34c58a58588c71ab16ff4 201 Gene3D G3DSA:2.60.40.3700 41 201 3.2E-62 T 13-10-2018 RPIT_01825 57fe3f50fff80af0f04e60a5b9f2029f 211 Pfam PF16264 SatD family (SatD) 14 121 7.3E-9 T 13-10-2018 IPR032580 SatD family RPIT_04285 48e8393a5d435cb72dd5fc6cdaccfe88 281 SUPERFAMILY SSF117892 52 185 3.92E-38 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily RPIT_04285 48e8393a5d435cb72dd5fc6cdaccfe88 281 Gene3D G3DSA:3.30.479.30 49 180 4.7E-45 T 13-10-2018 RPIT_04285 48e8393a5d435cb72dd5fc6cdaccfe88 281 PRINTS PR00721 Stomatin signature 28 50 2.4E-61 T 13-10-2018 IPR001972 Stomatin family GO:0016020 RPIT_04285 48e8393a5d435cb72dd5fc6cdaccfe88 281 PRINTS PR00721 Stomatin signature 130 153 2.4E-61 T 13-10-2018 IPR001972 Stomatin family GO:0016020 RPIT_04285 48e8393a5d435cb72dd5fc6cdaccfe88 281 PRINTS PR00721 Stomatin signature 154 172 2.4E-61 T 13-10-2018 IPR001972 Stomatin family GO:0016020 RPIT_04285 48e8393a5d435cb72dd5fc6cdaccfe88 281 PRINTS PR00721 Stomatin signature 110 127 2.4E-61 T 13-10-2018 IPR001972 Stomatin family GO:0016020 RPIT_04285 48e8393a5d435cb72dd5fc6cdaccfe88 281 PRINTS PR00721 Stomatin signature 75 96 2.4E-61 T 13-10-2018 IPR001972 Stomatin family GO:0016020 RPIT_04285 48e8393a5d435cb72dd5fc6cdaccfe88 281 PRINTS PR00721 Stomatin signature 198 221 2.4E-61 T 13-10-2018 IPR001972 Stomatin family GO:0016020 RPIT_04285 48e8393a5d435cb72dd5fc6cdaccfe88 281 PRINTS PR00721 Stomatin signature 173 194 2.4E-61 T 13-10-2018 IPR001972 Stomatin family GO:0016020 RPIT_04285 48e8393a5d435cb72dd5fc6cdaccfe88 281 SMART SM00244 21 178 6.3E-52 T 13-10-2018 IPR001107 Band 7 domain RPIT_04285 48e8393a5d435cb72dd5fc6cdaccfe88 281 Pfam PF01145 SPFH domain / Band 7 family 25 194 2.4E-34 T 13-10-2018 IPR001107 Band 7 domain RPIT_04360 d0ee13e117927db65a71519c61a50fb8 422 Pfam PF00266 Aminotransferase class-V 33 405 1.5E-143 T 13-10-2018 IPR000192 Aminotransferase class V domain RPIT_04360 d0ee13e117927db65a71519c61a50fb8 422 Gene3D G3DSA:3.40.640.10 44 305 4.6E-166 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 RPIT_04360 d0ee13e117927db65a71519c61a50fb8 422 Gene3D G3DSA:3.90.1150.10 16 409 4.6E-166 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 RPIT_04360 d0ee13e117927db65a71519c61a50fb8 422 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 15 416 1.6E-168 T 13-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 RPIT_04360 d0ee13e117927db65a71519c61a50fb8 422 SUPERFAMILY SSF53383 12 409 2.8E-120 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase RPIT_13435 0c28f9ee25e67ce42fd430ea2a64d792 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 130 5.6E-8 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIT_13435 0c28f9ee25e67ce42fd430ea2a64d792 138 SUPERFAMILY SSF54593 9 133 5.78E-16 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_13435 0c28f9ee25e67ce42fd430ea2a64d792 138 Gene3D G3DSA:3.10.180.10 8 135 9.3E-16 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIT_13845 7374cd75ea17b3f727b12effa2396f2b 179 Pfam PF00881 Nitroreductase family 92 156 6.0E-8 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 RPIT_13845 7374cd75ea17b3f727b12effa2396f2b 179 Pfam PF00881 Nitroreductase family 12 71 2.1E-10 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 RPIT_13845 7374cd75ea17b3f727b12effa2396f2b 179 SUPERFAMILY SSF55469 11 177 1.57E-31 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RPIT_13845 7374cd75ea17b3f727b12effa2396f2b 179 Gene3D G3DSA:3.40.109.10 7 178 1.0E-31 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RPIT_01525 e8b38f9aadac8dd0ef8fa88770442627 334 SUPERFAMILY SSF53335 125 291 3.27E-11 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_05785 0f0bd53eff14f37a0731ca7348fd7cd0 231 Pfam PF06078 Bacterial protein of unknown function (DUF937) 8 126 2.2E-19 T 13-10-2018 IPR009282 Protein of unknown function DUF937 RPIT_13010 2b05de3a0a25610f51e16bc561a26678 202 Gene3D G3DSA:2.160.20.80 10 202 6.9E-44 T 13-10-2018 RPIT_13010 2b05de3a0a25610f51e16bc561a26678 202 Pfam PF13599 Pentapeptide repeats (9 copies) 103 164 1.4E-12 T 13-10-2018 IPR001646 Pentapeptide repeat RPIT_13010 2b05de3a0a25610f51e16bc561a26678 202 Pfam PF13599 Pentapeptide repeats (9 copies) 34 89 1.3E-9 T 13-10-2018 IPR001646 Pentapeptide repeat RPIT_13010 2b05de3a0a25610f51e16bc561a26678 202 SUPERFAMILY SSF141571 28 200 6.15E-39 T 13-10-2018 RPIT_14460 5766e763c760e3a32e1cdde35a8da78c 517 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 237 261 8.4E-13 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_14460 5766e763c760e3a32e1cdde35a8da78c 517 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 166 190 8.4E-13 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_14460 5766e763c760e3a32e1cdde35a8da78c 517 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 136 155 8.4E-13 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_14460 5766e763c760e3a32e1cdde35a8da78c 517 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 375 401 8.4E-13 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_14460 5766e763c760e3a32e1cdde35a8da78c 517 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 323 342 8.4E-13 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_14460 5766e763c760e3a32e1cdde35a8da78c 517 Pfam PF00361 Proton-conducting membrane transporter 130 415 1.6E-65 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RPIT_10140 e084d649da49004c6165048dcc272cb2 148 Pfam PF02416 mttA/Hcf106 family 7 32 6.5E-6 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RPIT_10140 e084d649da49004c6165048dcc272cb2 148 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 4.4E-8 T 13-10-2018 RPIT_10140 e084d649da49004c6165048dcc272cb2 148 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 4.4E-8 T 13-10-2018 RPIT_10140 e084d649da49004c6165048dcc272cb2 148 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 4.4E-8 T 13-10-2018 RPIT_01425 21ccc40b6c21b18e16432dac24faf5ab 74 Pfam PF14029 Protein of unknown function (DUF4244) 20 56 1.0E-7 T 13-10-2018 IPR025338 Protein of unknown function DUF4244 RPIT_10680 539f06c91f3af043a06b749076636364 220 Pfam PF08713 DNA alkylation repair enzyme 7 186 9.6E-21 T 13-10-2018 IPR014825 DNA alkylation repair enzyme RPIT_10680 539f06c91f3af043a06b749076636364 220 SUPERFAMILY SSF48371 4 218 1.12E-60 T 13-10-2018 IPR016024 Armadillo-type fold RPIT_04055 f322184bd750a8eec4310906a44c5515 94 Pfam PF02325 YGGT family 8 89 8.1E-19 T 13-10-2018 IPR003425 CCB3/YggT GO:0016020 RPIT_03815 7f3a6c1964d6d821f389f4d60ad23a1f 242 Pfam PF02581 Thiamine monophosphate synthase 102 189 8.2E-7 T 13-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RPIT_03815 7f3a6c1964d6d821f389f4d60ad23a1f 242 Gene3D G3DSA:3.20.20.70 22 211 1.5E-13 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIT_03815 7f3a6c1964d6d821f389f4d60ad23a1f 242 SUPERFAMILY SSF51391 7 205 1.2E-14 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RPIT_12310 add9711980c97a9ef971037d3b98b635 624 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 308 493 6.9E-19 T 13-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain RPIT_12310 add9711980c97a9ef971037d3b98b635 624 Gene3D G3DSA:1.10.260.150 281 573 8.2E-52 T 13-10-2018 RPIT_12310 add9711980c97a9ef971037d3b98b635 624 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 308 493 2.6E-20 T 13-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain RPIT_05145 c31559eab8ba3d03ba864ea3bf2619aa 331 SUPERFAMILY SSF110296 37 300 3.4E-7 T 13-10-2018 RPIT_10630 cb2431a13524392714e1627e7889b359 145 Gene3D G3DSA:3.90.79.10 3 137 1.9E-21 T 13-10-2018 RPIT_10630 cb2431a13524392714e1627e7889b359 145 PRINTS PR00502 NUDIX hydrolase family signature 28 42 1.4E-6 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RPIT_10630 cb2431a13524392714e1627e7889b359 145 PRINTS PR00502 NUDIX hydrolase family signature 42 57 1.4E-6 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RPIT_10630 cb2431a13524392714e1627e7889b359 145 ProSitePatterns PS00893 Nudix box signature. 33 54 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RPIT_10630 cb2431a13524392714e1627e7889b359 145 Pfam PF00293 NUDIX domain 19 132 9.5E-13 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 RPIT_10630 cb2431a13524392714e1627e7889b359 145 SUPERFAMILY SSF55811 2 139 1.06E-20 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 RPIT_08675 d84ff8ee7ab8a261278f9af6fe4fca79 186 Pfam PF04138 GtrA-like protein 17 168 7.2E-16 T 13-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 RPIT_14235 2ce78606016b9f15b3dadbd98c1fdaac 286 Pfam PF00482 Type II secretion system (T2SS), protein F 109 234 4.2E-9 T 13-10-2018 IPR018076 Type II secretion system F domain RPIT_02765 256fb28456f1a7ab4a501affd8262e75 293 Pfam PF12697 Alpha/beta hydrolase family 84 258 6.6E-9 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 RPIT_02765 256fb28456f1a7ab4a501affd8262e75 293 Gene3D G3DSA:3.40.50.1820 67 293 2.5E-25 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_02765 256fb28456f1a7ab4a501affd8262e75 293 SUPERFAMILY SSF53474 44 292 1.23E-27 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_04025 96aec900fc01b0c07d81fa4c3e05a6b7 387 Pfam PF01098 Cell cycle protein 11 357 1.9E-83 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RPIT_04025 96aec900fc01b0c07d81fa4c3e05a6b7 387 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 5 357 1.3E-104 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RPIT_04815 bb041e9682b2f5e240f1bbea0b1f9b77 292 Pfam PF13830 Domain of unknown function (DUF4192) 8 285 1.0E-27 T 13-10-2018 IPR025447 Protein of unknown function DUF4192 RPIT_13045 2140189cfe737d88a37ecfd0e5fe4e2c 198 Pfam PF13548 Domain of unknown function (DUF4126) 6 172 5.2E-43 T 13-10-2018 IPR025196 Domain of unknown function DUF4126 RPIT_07255 5cb83c215c80049379bb2339d21cfab0 321 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 14 192 2.9E-13 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 RPIT_11150 afb318e7be39505be1b87e424568e090 504 Pfam PF00860 Permease family 82 457 1.5E-16 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 RPIT_07500 5d6a70a8194c3084817f9166c2643134 316 Gene3D G3DSA:3.20.170.40 175 316 4.1E-51 T 13-10-2018 IPR038611 Rifampin ADP-ribosyltransferase superfamily RPIT_07500 5d6a70a8194c3084817f9166c2643134 316 Pfam PF12120 Rifampin ADP-ribosyl transferase 190 286 2.8E-40 T 13-10-2018 IPR021975 Rifampin ADP-ribosyltransferase RPIT_07605 10128542e8baeb9e4030ae17a6134eda 76 Pfam PF01402 Ribbon-helix-helix protein, copG family 40 74 1.2E-7 T 13-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 RPIT_06990 74506f3206ee5436d71f02e16ff39b72 301 Pfam PF03547 Membrane transport protein 152 295 1.5E-15 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 RPIT_09595 f51747d1df206c12a3b128e4334fc286 983 SUPERFAMILY SSF53448 31 255 4.59E-27 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_09595 f51747d1df206c12a3b128e4334fc286 983 Pfam PF00535 Glycosyl transferase family 2 37 150 1.1E-9 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RPIT_09595 f51747d1df206c12a3b128e4334fc286 983 Gene3D G3DSA:3.90.550.10 28 258 1.5E-23 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_14575 9dae9d35f0c2685216066e91cc043391 333 Gene3D G3DSA:2.130.10.10 1 333 2.3E-63 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 RPIT_14575 9dae9d35f0c2685216066e91cc043391 333 SUPERFAMILY SSF51004 4 331 1.57E-25 T 13-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily RPIT_14575 9dae9d35f0c2685216066e91cc043391 333 Pfam PF10282 Lactonase, 7-bladed beta-propeller 12 321 8.8E-39 T 13-10-2018 IPR019405 Lactonase, 7-bladed beta propeller RPIT_04650 d925c119ff5773d1032d23747edb20ee 310 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 2 279 3.8E-92 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 RPIT_09875 7adfe868310ca911a201c971e9632126 353 SUPERFAMILY SSF51261 178 347 9.42E-46 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_09875 7adfe868310ca911a201c971e9632126 353 Pfam PF01551 Peptidase family M23 242 329 1.8E-29 T 13-10-2018 IPR016047 Peptidase M23 RPIT_09875 7adfe868310ca911a201c971e9632126 353 Gene3D G3DSA:2.70.70.10 162 349 9.8E-42 T 13-10-2018 IPR011055 Duplicated hybrid motif RPIT_11745 4240a7f45b13eb9a7f2695c0979131d0 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 271 4.5E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_11745 4240a7f45b13eb9a7f2695c0979131d0 306 Gene3D G3DSA:1.10.3720.10 88 277 1.2E-31 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_11745 4240a7f45b13eb9a7f2695c0979131d0 306 SUPERFAMILY SSF161098 92 273 2.49E-36 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_09895 e7d407dffcd60e90eb5b5fadb691b18a 87 Pfam PF04226 Transglycosylase associated protein 34 84 8.1E-12 T 13-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 RPIT_03515 5f5540eccaf5cf72481007ae7e68da6c 247 SUPERFAMILY SSF161098 47 227 9.68E-26 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_03515 5f5540eccaf5cf72481007ae7e68da6c 247 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 70 235 3.1E-24 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 RPIT_03515 5f5540eccaf5cf72481007ae7e68da6c 247 Gene3D G3DSA:1.10.3720.10 40 239 1.1E-24 T 13-10-2018 IPR035906 MetI-like superfamily RPIT_01675 045855a096c8f4af419c7c923cf5bdd9 253 Pfam PF02517 CAAX protease self-immunity 146 235 1.9E-14 T 13-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 RPIT_05500 e06cb57d23bce33140e2ebeef67ff19f 346 Pfam PF09949 Uncharacterized conserved protein (DUF2183) 200 295 4.7E-27 T 13-10-2018 IPR019236 Domain of unknown function DUF2183 RPIT_09355 e7dfec727b8f0809ece3020ee193a21b 248 Pfam PF07505 Protein of unknown function (DUF5131) 5 243 1.5E-92 T 13-10-2018 IPR011101 Protein of unknown function DUF5131 RPIT_14010 490b3f6fd948c4c5348f917d491c0a22 421 Pfam PF00872 Transposase, Mutator family 24 386 6.4E-126 T 13-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RPIT_07445 38975455252c3393549bde478488aa89 427 Pfam PF13191 AAA ATPase domain 28 178 9.4E-10 T 13-10-2018 RPIT_07445 38975455252c3393549bde478488aa89 427 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 43 56 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RPIT_07445 38975455252c3393549bde478488aa89 427 SUPERFAMILY SSF52540 24 283 1.82E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_05315 a5b5c90571eaaff65df28c95931c8a9f 191 Pfam PF08044 Domain of unknown function (DUF1707) 6 55 4.4E-14 T 13-10-2018 IPR012551 Protein of unknown function DUF1707 RPIT_06575 3b1c5b8d545ba8a2b62dcd2ef80322ef 136 SMART SM00116 76 123 1.4E-11 T 13-10-2018 IPR000644 CBS domain RPIT_06575 3b1c5b8d545ba8a2b62dcd2ef80322ef 136 SMART SM00116 11 58 2.6E-7 T 13-10-2018 IPR000644 CBS domain RPIT_06575 3b1c5b8d545ba8a2b62dcd2ef80322ef 136 Pfam PF00571 CBS domain 72 122 3.5E-12 T 13-10-2018 IPR000644 CBS domain RPIT_06575 3b1c5b8d545ba8a2b62dcd2ef80322ef 136 Pfam PF00571 CBS domain 4 54 7.9E-14 T 13-10-2018 IPR000644 CBS domain RPIT_06575 3b1c5b8d545ba8a2b62dcd2ef80322ef 136 SUPERFAMILY SSF54631 2 118 4.8E-34 T 13-10-2018 RPIT_06575 3b1c5b8d545ba8a2b62dcd2ef80322ef 136 Gene3D G3DSA:3.10.580.10 1 125 4.6E-39 T 13-10-2018 RPIT_10295 b2df5d17b1082c402cee65b2f6b32e74 263 Gene3D G3DSA:2.70.98.10 2 261 2.9E-48 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 RPIT_10295 b2df5d17b1082c402cee65b2f6b32e74 263 SUPERFAMILY SSF74650 3 259 1.18E-35 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 RPIT_10295 b2df5d17b1082c402cee65b2f6b32e74 263 Pfam PF01263 Aldose 1-epimerase 13 258 7.8E-18 T 13-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RPIT_09080 bb6dd3aad2f99cde4cfc59300959173d 497 Pfam PF01609 Transposase DDE domain 169 441 7.3E-19 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RPIT_09080 bb6dd3aad2f99cde4cfc59300959173d 497 SUPERFAMILY SSF53098 197 453 2.73E-10 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily RPIT_11110 3e25dad57d494e9df2f630111458fa17 248 SUPERFAMILY SSF53335 39 194 1.48E-30 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_11110 3e25dad57d494e9df2f630111458fa17 248 Gene3D G3DSA:3.40.50.150 27 194 1.2E-30 T 13-10-2018 RPIT_11110 3e25dad57d494e9df2f630111458fa17 248 Pfam PF08241 Methyltransferase domain 46 135 3.3E-23 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 RPIT_11815 7770e1e7e8ab01b7d1addc5510b47285 417 Pfam PF10011 Predicted membrane protein (DUF2254) 25 391 6.6E-109 T 13-10-2018 IPR018723 Protein of unknown function DUF2254, membrane RPIT_03610 c2e652fb1ff1b46771178779442fde3e 218 Pfam PF11241 Protein of unknown function (DUF3043) 59 216 1.4E-36 T 13-10-2018 IPR021403 Protein of unknown function DUF3043 RPIT_11035 7e30dc107ec5a3cf7100985cb73d1b01 89 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 51 5.7E-21 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RPIT_11035 7e30dc107ec5a3cf7100985cb73d1b01 89 SMART SM00834 1 41 1.6E-17 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RPIT_11035 7e30dc107ec5a3cf7100985cb73d1b01 89 Pfam PF09723 Zinc ribbon domain 1 40 2.2E-16 T 13-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RPIT_05375 70cfef7a40e3773bd394d01e0e474233 109 Gene3D G3DSA:2.60.40.420 18 108 4.4E-7 T 13-10-2018 IPR008972 Cupredoxin RPIT_05375 70cfef7a40e3773bd394d01e0e474233 109 SUPERFAMILY SSF49503 11 108 9.58E-9 T 13-10-2018 IPR008972 Cupredoxin RPIT_06070 a3cf2822ed91edcd48af33d15441fcfe 536 SUPERFAMILY SSF53474 314 495 2.25E-15 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_06070 a3cf2822ed91edcd48af33d15441fcfe 536 Gene3D G3DSA:3.40.50.1820 313 536 3.3E-35 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold RPIT_06070 a3cf2822ed91edcd48af33d15441fcfe 536 Pfam PF10503 Esterase PHB depolymerase 390 456 5.8E-6 T 13-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 RPIT_06985 03e75278ba6cf40c80d21b6688254c4e 299 SUPERFAMILY SSF69635 169 286 1.05E-8 T 13-10-2018 RPIT_01460 cad73689f658ee9a44a901d513262c9b 460 SUPERFAMILY SSF55154 47 163 4.9E-7 T 13-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 RPIT_00930 e0cb012b843f1766e3fff60c9ae49e3c 203 SUPERFAMILY SSF50199 5 112 7.59E-15 T 13-10-2018 RPIT_00930 e0cb012b843f1766e3fff60c9ae49e3c 203 Gene3D G3DSA:2.40.50.90 1 120 6.9E-20 T 13-10-2018 IPR035437 SNase-like, OB-fold superfamily RPIT_00930 e0cb012b843f1766e3fff60c9ae49e3c 203 Pfam PF00565 Staphylococcal nuclease homologue 18 96 5.4E-5 T 13-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 RPIT_00205 2267a694a80ceef003397c687f54ae33 67 SUPERFAMILY SSF48208 1 57 1.36E-11 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 RPIT_00205 2267a694a80ceef003397c687f54ae33 67 Gene3D G3DSA:1.50.10.10 1 62 3.0E-14 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 RPIT_00160 fc5f0fe51493a324e5ea34a60edfe91a 207 Gene3D G3DSA:3.30.470.30 13 100 4.6E-12 T 13-10-2018 RPIT_00160 fc5f0fe51493a324e5ea34a60edfe91a 207 Pfam PF01068 ATP dependent DNA ligase domain 19 95 2.3E-10 T 13-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 RPIT_00160 fc5f0fe51493a324e5ea34a60edfe91a 207 SUPERFAMILY SSF56091 21 94 4.89E-11 T 13-10-2018 RPIT_13345 654ea3758b4ada562330adc561b9a250 452 Pfam PF02687 FtsX-like permease family 348 445 3.8E-13 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 RPIT_13345 654ea3758b4ada562330adc561b9a250 452 Pfam PF12704 MacB-like periplasmic core domain 21 161 1.9E-11 T 13-10-2018 IPR025857 MacB-like periplasmic core domain RPIT_01180 020464283c001c7a3c440bb18058a955 485 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 278 6.8E-13 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIT_01180 020464283c001c7a3c440bb18058a955 485 SUPERFAMILY SSF51905 2 396 1.23E-10 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_01180 020464283c001c7a3c440bb18058a955 485 Gene3D G3DSA:3.50.50.100 1 476 5.0E-94 T 13-10-2018 RPIT_01180 020464283c001c7a3c440bb18058a955 485 SUPERFAMILY SSF51905 1 190 2.59E-21 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily RPIT_00375 ad8b9250c71d94c7dcb16787e7d5d5b6 230 Pfam PF12787 EcsC protein family 41 214 1.4E-11 T 13-10-2018 IPR024787 EcsC protein RPIT_06570 d209af8f8366a0f0cc94a68677a266e3 221 Pfam PF12787 EcsC protein family 51 214 3.8E-9 T 13-10-2018 IPR024787 EcsC protein RPIT_05845 e74320a2d7687477c1c5e2517f878c7f 1121 Pfam PF03639 Glycosyl hydrolase family 81 46 687 1.6E-63 T 13-10-2018 IPR005200 Endo-1,3(4)-beta-glucanase GO:0052861 RPIT_03325 66ae541401912971267f2da7e208b1cc 246 Pfam PF01925 Sulfite exporter TauE/SafE 11 244 2.2E-27 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIT_03505 b7deeb8419ce9de730e9d24b85798e3c 140 Gene3D G3DSA:3.30.1050.40 10 140 3.6E-36 T 13-10-2018 RPIT_14340 ad131612a29cb67e8fc7ce2b46b40c30 208 Pfam PF10099 Anti-sigma-K factor rskA 29 204 6.3E-15 T 13-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 RPIT_13460 772a6d91fad894d54fde54d4fbc1ab9e 73 Gene3D G3DSA:1.10.8.1250 1 67 6.3E-7 T 13-10-2018 IPR038296 Antitoxin ParD superfamily RPIT_02680 56e47e54c422e79de075f116759f3cec 99 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 94 8.1E-21 T 13-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like RPIT_02680 56e47e54c422e79de075f116759f3cec 99 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 1 99 19.795 T 13-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RPIT_13080 3605910ef6a27e73e7548554414f0337 421 Pfam PF09594 Glycosyltransferase family 87 85 317 2.4E-57 T 13-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 RPIT_09255 bb52a808125cccb9690d4612bb2db6c6 456 Pfam PF14040 Deoxyribonuclease NucA/NucB 326 451 4.1E-8 T 13-10-2018 IPR029476 Deoxyribonuclease NucA/NucB RPIT_14380 58ab8f2e88bfa3c7380ea3473b3e66ae 256 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 256 31.371 T 13-10-2018 IPR005583 Peroxide stress protein YaaA RPIT_14380 58ab8f2e88bfa3c7380ea3473b3e66ae 256 Pfam PF03883 Peroxide stress protein YaaA 1 245 1.5E-80 T 13-10-2018 IPR005583 Peroxide stress protein YaaA RPIT_10770 f768dc43859a349754cece32ebe424a8 277 Pfam PF12730 ABC-2 family transporter protein 27 190 6.2E-12 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 RPIT_03495 59e0ecb2ffacd72d2143d3ce8c3ddd67 282 Pfam PF10708 Protein of unknown function (DUF2510) 4 26 7.5E-7 T 13-10-2018 IPR018929 Domain of unknown function DUF2510 RPIT_02370 a6a4d09ea9e844abc346c2f14be41120 515 Pfam PF02687 FtsX-like permease family 408 504 1.7E-6 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 RPIT_14635 7c60cbec29fa8a063ba2f03be776a870 119 SUPERFAMILY SSF50249 1 105 1.3E-12 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold RPIT_14635 7c60cbec29fa8a063ba2f03be776a870 119 Gene3D G3DSA:2.40.50.140 2 118 3.7E-18 T 13-10-2018 RPIT_14635 7c60cbec29fa8a063ba2f03be776a870 119 Pfam PF00436 Single-strand binding protein family 7 104 6.4E-10 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 RPIT_04345 ea8e38a470af3efc55bd18ddc728bcb5 393 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 105 371 7.7E-68 T 13-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 RPIT_04345 ea8e38a470af3efc55bd18ddc728bcb5 393 Pfam PF01458 Uncharacterized protein family (UPF0051) 135 354 1.6E-65 T 13-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 RPIT_04345 ea8e38a470af3efc55bd18ddc728bcb5 393 SUPERFAMILY SSF101960 19 380 5.1E-80 T 13-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily RPIT_10700 be437f3eb9483060bc52711e6f47550b 140 Pfam PF04977 Septum formation initiator 1 76 1.1E-18 T 13-10-2018 IPR007060 Septum formation initiator FtsL/DivIC RPIT_06995 ec7054637c08d330dd58e7b067b83794 161 Pfam PF09335 SNARE associated Golgi protein 13 115 4.2E-16 T 13-10-2018 IPR032816 SNARE associated Golgi protein RPIT_07460 b024c95fff23aacb95609f656d5eb625 701 Pfam PF03235 Protein of unknown function DUF262 12 224 9.7E-30 T 13-10-2018 IPR004919 Domain of unknown function DUF262 RPIT_13910 13ea2bc108fefc2e1059ddaac987b703 253 SUPERFAMILY SSF53448 18 87 3.19E-5 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases RPIT_09085 9d8481293a37fdfb0b8b8d0f08bce59c 251 SUPERFAMILY SSF56784 31 218 3.4E-20 T 13-10-2018 IPR036412 HAD-like superfamily RPIT_09085 9d8481293a37fdfb0b8b8d0f08bce59c 251 Pfam PF13419 Haloacid dehalogenase-like hydrolase 92 198 4.5E-6 T 13-10-2018 RPIT_09085 9d8481293a37fdfb0b8b8d0f08bce59c 251 Gene3D G3DSA:3.40.50.1000 87 244 3.4E-18 T 13-10-2018 IPR023214 HAD superfamily RPIT_12585 371cfd0a0de91bf3e3c5e1cd67f121ce 290 Gene3D G3DSA:3.40.960.10 179 279 3.3E-11 T 13-10-2018 RPIT_11855 f4dced440743bff11f403a43b5a9f831 268 Pfam PF02535 ZIP Zinc transporter 116 259 9.4E-21 T 13-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 RPIT_05545 6dbdc91f51fa9c2194834bce66692418 146 Pfam PF11292 Protein of unknown function (DUF3093) 3 142 2.8E-40 T 13-10-2018 IPR021443 Protein of unknown function DUF3093 RPIT_07455 43843d605d64c902a8a150aee6a2ad31 252 Pfam PF14281 PD-(D/E)XK nuclease superfamily 10 157 7.7E-13 T 13-10-2018 IPR029470 PD-(D/E)XK nuclease superfamily 4 RPIT_05975 3ada7e9ed90b5133979a3e647a0396fd 113 Gene3D G3DSA:2.20.28.270 1 80 5.2E-29 T 13-10-2018 IPR038638 RbpA superfamily RPIT_05975 3ada7e9ed90b5133979a3e647a0396fd 113 Hamap MF_01483 RNA polymerase-binding protein RbpA [rbpA]. 16 113 23.16 T 13-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 RPIT_05975 3ada7e9ed90b5133979a3e647a0396fd 113 Pfam PF13397 RNA polymerase-binding protein 4 107 1.2E-37 T 13-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 RPIT_03550 806d9890a66ec4f11a545c20808df68f 142 PIRSF PIRSF021697 2 138 5.4E-44 T 13-10-2018 IPR016795 Uncharacterised conserved protein UCP021697, membrane RPIT_03550 806d9890a66ec4f11a545c20808df68f 142 Pfam PF06271 RDD family 22 124 6.5E-8 T 13-10-2018 IPR010432 RDD RPIT_14160 09c65dbf2254fb88a14ecd779d961b99 438 Pfam PF02417 Chromate transporter 257 430 1.4E-10 T 13-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 RPIT_14160 09c65dbf2254fb88a14ecd779d961b99 438 Pfam PF02417 Chromate transporter 11 164 4.2E-12 T 13-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 RPIT_14855 212cd99cb1b97d6481ff6ee738cd8881 137 Pfam PF04854 Protein of unknown function, DUF624 19 90 2.0E-11 T 13-10-2018 IPR006938 Protein of unknown function DUF624 RPIT_01590 cd7c64e8f905a9bcea7deac5994ea534 162 Pfam PF11377 Protein of unknown function (DUF3180) 16 146 3.1E-19 T 13-10-2018 IPR021517 Protein of unknown function DUF3180 RPIT_08040 9b76f576c0ee5b9dab82c172d105ffb0 275 Pfam PF02616 Segregation and condensation protein ScpA 33 252 3.8E-41 T 13-10-2018 IPR003768 Segregation and condensation protein A RPIT_11945 ec9b00d6e4b3099bee9749a9378f7a6e 76 SUPERFAMILY SSF56601 2 75 2.71E-12 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like RPIT_11945 ec9b00d6e4b3099bee9749a9378f7a6e 76 Pfam PF00905 Penicillin binding protein transpeptidase domain 2 72 4.4E-7 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RPIT_11945 ec9b00d6e4b3099bee9749a9378f7a6e 76 Gene3D G3DSA:3.40.710.10 1 76 7.9E-14 T 13-10-2018 RPIT_07200 1181f9baf383ee98325bc85293675d6e 258 Pfam PF02517 CAAX protease self-immunity 104 201 1.1E-15 T 13-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 RPIT_10625 8b3eadf20ded70aea9615e45370247bc 294 Pfam PF04228 Putative neutral zinc metallopeptidase 6 287 1.8E-73 T 13-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative RPIT_12115 8f47ed3b6a7a5acb6f0d77f7933518c2 142 SUPERFAMILY SSF54427 41 132 1.23E-6 T 13-10-2018 IPR032710 NTF2-like domain superfamily RPIT_05225 08c112e114857f5e8d6a2bce90c775ac 470 Pfam PF01235 Sodium:alanine symporter family 58 448 3.7E-139 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RPIT_05225 08c112e114857f5e8d6a2bce90c775ac 470 Gene3D G3DSA:1.20.1740.10 63 444 2.5E-5 T 13-10-2018 RPIT_05225 08c112e114857f5e8d6a2bce90c775ac 470 TIGRFAM TIGR00835 agcS: amino acid carrier protein 21 445 2.0E-149 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RPIT_05225 08c112e114857f5e8d6a2bce90c775ac 470 PRINTS PR00175 Sodium/alanine symporter signature 94 116 6.7E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RPIT_05225 08c112e114857f5e8d6a2bce90c775ac 470 PRINTS PR00175 Sodium/alanine symporter signature 216 235 6.7E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RPIT_05225 08c112e114857f5e8d6a2bce90c775ac 470 PRINTS PR00175 Sodium/alanine symporter signature 310 328 6.7E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RPIT_05225 08c112e114857f5e8d6a2bce90c775ac 470 PRINTS PR00175 Sodium/alanine symporter signature 414 434 6.7E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RPIT_05225 08c112e114857f5e8d6a2bce90c775ac 470 PRINTS PR00175 Sodium/alanine symporter signature 355 377 6.7E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RPIT_05225 08c112e114857f5e8d6a2bce90c775ac 470 PRINTS PR00175 Sodium/alanine symporter signature 188 206 6.7E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RPIT_01505 527690dd2208149790be3ce4375ce930 359 Pfam PF06224 Winged helix DNA-binding domain 29 347 6.3E-44 T 13-10-2018 IPR009351 Protein of unknown function DUF1006 RPIT_06350 1786cb5ac8d376d2a020f460a44e3093 506 Gene3D G3DSA:3.40.50.11440 46 210 2.5E-19 T 13-10-2018 RPIT_06350 1786cb5ac8d376d2a020f460a44e3093 506 Pfam PF09861 Domain of unknown function (DUF2088) 34 184 1.3E-20 T 13-10-2018 IPR018657 LarA-like, N-terminal GO:0050043 KEGG: 00620+5.1.2.1 RPIT_05415 693af51f6240a03a95e4a1025f0cc45e 74 Pfam PF11305 Protein of unknown function (DUF3107) 1 72 3.1E-27 T 13-10-2018 IPR021456 Protein of unknown function DUF3107 RPIT_02515 026275581c52bc32956a2f5382940259 557 Pfam PF00128 Alpha amylase, catalytic domain 41 410 1.8E-72 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_02515 026275581c52bc32956a2f5382940259 557 SMART SM00642 26 437 9.7E-111 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RPIT_02515 026275581c52bc32956a2f5382940259 557 SUPERFAMILY SSF51445 17 493 6.18E-114 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily RPIT_11770 498e9c21a7fa3aa2edb154b959b30922 267 SUPERFAMILY SSF53335 24 218 5.55E-18 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIT_11770 498e9c21a7fa3aa2edb154b959b30922 267 Gene3D G3DSA:3.40.50.150 2 258 5.3E-46 T 13-10-2018 RPIT_02440 2821897f444349673a2e5ab7705bd89a 464 Pfam PF05140 ResB-like family 372 443 7.6E-14 T 13-10-2018 IPR007816 ResB-like domain RPIT_02440 2821897f444349673a2e5ab7705bd89a 464 Pfam PF05140 ResB-like family 17 282 1.8E-49 T 13-10-2018 IPR007816 ResB-like domain RPIT_07710 cbcbc88577ea8ca1b21c175b7105e18b 227 SUPERFAMILY SSF55729 98 213 3.17E-11 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase RPIT_07710 cbcbc88577ea8ca1b21c175b7105e18b 227 Gene3D G3DSA:3.40.630.30 95 224 3.2E-12 T 13-10-2018 RPIT_00525 94da60496588f0e20ba8571819dbf543 284 Pfam PF01061 ABC-2 type transporter 43 214 2.2E-9 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 RPIT_10125 98e4d3b41aa8f725f8d8199739eba2e3 168 Pfam PF06210 Protein of unknown function (DUF1003) 40 142 7.4E-39 T 13-10-2018 IPR010406 Protein of unknown function DUF1003 RPIT_10565 bdbfbc6144a58c170bd147ba3545f681 136 Pfam PF14155 Domain of unknown function (DUF4307) 26 132 4.0E-15 T 13-10-2018 IPR025443 Protein of unknown function DUF4307 RPIT_12720 87e520f9354c4ecd9c93be9148172b4b 227 Pfam PF05949 Bacterial protein of unknown function (DUF881) 78 221 5.1E-39 T 13-10-2018 IPR010273 Protein of unknown function DUF881 RPIT_12720 87e520f9354c4ecd9c93be9148172b4b 227 Gene3D G3DSA:3.30.70.1880 75 227 1.6E-27 T 13-10-2018 RPIT_06610 9d9ed7acca3ce284f3dad5be80e7f248 355 Pfam PF05103 DivIVA protein 26 133 1.1E-7 T 13-10-2018 IPR007793 DivIVA family RPIT_06010 2c7f36f70bb3cc3a009abc155726aa53 236 Pfam PF01988 VIT family 21 228 6.8E-45 T 13-10-2018 IPR008217 Ccc1 family RPIT_13325 4f9b37ad718e1300c3cd30cd63a1bff2 200 SUPERFAMILY SSF52833 2 159 5.11E-18 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_13325 4f9b37ad718e1300c3cd30cd63a1bff2 200 Gene3D G3DSA:3.40.30.10 4 200 3.8E-66 T 13-10-2018 RPIT_07275 009b82688ecf28f9c54854b2a16fc54a 217 Gene3D G3DSA:1.20.1260.10 55 217 3.3E-53 T 13-10-2018 IPR012347 Ferritin-like RPIT_07275 009b82688ecf28f9c54854b2a16fc54a 217 Pfam PF03713 Domain of unknown function (DUF305) 67 214 1.2E-50 T 13-10-2018 IPR005183 Domain of unknown function DUF305 RPIT_01795 4b8d05951acbac65b4ba9ed1104dca80 250 SUPERFAMILY SSF49785 124 204 4.89E-7 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_01795 4b8d05951acbac65b4ba9ed1104dca80 250 Gene3D G3DSA:2.60.120.260 117 232 4.8E-6 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily RPIT_14035 06e3cd0120e9e4d3aa98dc67f13c7a6e 288 Pfam PF04230 Polysaccharide pyruvyl transferase 61 131 3.3E-7 T 13-10-2018 IPR007345 Polysaccharide pyruvyl transferase RPIT_10435 cad25201054852933d2f204849bba26f 164 SUPERFAMILY SSF81301 13 109 6.54E-7 T 13-10-2018 RPIT_10435 cad25201054852933d2f204849bba26f 164 Gene3D G3DSA:3.30.460.40 3 160 2.3E-40 T 13-10-2018 RPIT_04905 f3583fa570794b8ab999bf4b83b306a5 278 Pfam PF11296 Protein of unknown function (DUF3097) 3 275 2.2E-109 T 13-10-2018 IPR021447 Protein of unknown function DUF3097 RPIT_08895 705fe2b31db8057fc2abed7a8072fa7a 377 Gene3D G3DSA:2.60.120.1440 72 190 2.7E-6 T 13-10-2018 RPIT_08895 705fe2b31db8057fc2abed7a8072fa7a 377 Pfam PF04773 FecR protein 83 165 3.1E-11 T 13-10-2018 IPR006860 FecR protein RPIT_09935 ddcb9413aa5f45a7dace68ba2da794bf 132 Gene3D G3DSA:3.40.50.720 1 96 8.2E-11 T 13-10-2018 RPIT_09935 ddcb9413aa5f45a7dace68ba2da794bf 132 SUPERFAMILY SSF51735 1 80 2.13E-12 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily RPIT_03205 e5a4bc8e89ce9c862c11cc7059e362dc 120 Pfam PF08044 Domain of unknown function (DUF1707) 19 67 1.0E-11 T 13-10-2018 IPR012551 Protein of unknown function DUF1707 RPIT_09660 904fb130b8274630dbbc9ca810a38df4 71 Pfam PF13822 Acyl-CoA carboxylase epsilon subunit 5 65 1.8E-9 T 13-10-2018 IPR032716 Acyl-CoA carboxylase epsilon subunit RPIT_12320 ec4965917e72a00527ec5be5f4bee79f 408 Pfam PF01757 Acyltransferase family 63 373 5.1E-18 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 RPIT_01720 ab1b79b10144f41b03a4d13c742dd672 542 Pfam PF05140 ResB-like family 24 485 1.2E-110 T 13-10-2018 IPR007816 ResB-like domain RPIT_09815 e57aed33eafb2682c0c2cd5db9aa22b5 535 Gene3D G3DSA:1.20.1730.10 16 492 4.7E-48 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily RPIT_09815 e57aed33eafb2682c0c2cd5db9aa22b5 535 Pfam PF00474 Sodium:solute symporter family 44 452 8.8E-88 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 RPIT_13615 20fcd25d06c239de555d93101d3b0250 309 Pfam PF02485 Core-2/I-Branching enzyme 10 241 1.4E-12 T 13-10-2018 IPR003406 Glycosyl transferase, family 14 GO:0008375|GO:0016020 RPIT_10605 f64dadd79556a1e1f1fe11f20a21e03e 580 SUPERFAMILY SSF143597 359 484 2.35E-8 T 13-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily RPIT_07060 19acdaffd3961e12e66ea176d0109b38 70 Pfam PF14013 MT0933-like antitoxin protein 4 50 6.3E-20 T 13-10-2018 IPR028037 Antitoxin Rv0909/MT0933 RPIT_09625 e45a3dd06a058369410ba95e59dbc516 499 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 181 354 7.8E-21 T 13-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain RPIT_09625 e45a3dd06a058369410ba95e59dbc516 499 Gene3D G3DSA:1.10.260.150 154 420 8.6E-51 T 13-10-2018 RPIT_07260 b3098f23ee3dd6cc810ac7ba478ff2bd 85 SUPERFAMILY SSF52833 3 83 6.63E-8 T 13-10-2018 IPR036249 Thioredoxin-like superfamily RPIT_10840 ba431b64f42540eed4d456cad50e66c6 304 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 2 296 5.3E-34 T 13-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 RPIT_14225 cea97cd313de24a729bbf2d835ce0b9f 266 Gene3D G3DSA:3.40.50.300 2 252 2.9E-13 T 13-10-2018 RPIT_14225 cea97cd313de24a729bbf2d835ce0b9f 266 SUPERFAMILY SSF52540 1 251 2.2E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIT_01530 a3faf4d284a22574d2f1f1600a353e0f 117 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 103 1.5E-8 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RPIT_09720 645563110af0813be31e3a6796b7e37c 604 Pfam PF09972 Predicted membrane protein (DUF2207) 33 525 3.2E-69 T 13-10-2018 IPR018702 Protein of unknown function DUF2207, membrane RPIT_09220 cf840ab9dd260848eacc22c72adbe4ab 148 SUPERFAMILY SSF55961 4 144 4.03E-7 T 13-10-2018 RPIT_13965 df4f7d4467532fb3c69ff8b403bf28f2 296 Pfam PF14907 Uncharacterised nucleotidyltransferase 22 192 9.7E-15 T 13-10-2018 IPR039498 Uncharacterised nucleotidyltransferase RPIT_11335 02c26c7b1e0a0037becb722b94fe3498 450 Pfam PF01594 AI-2E family transporter 45 363 1.4E-56 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like RPIT_03850 c583b9ddb46b0ab6dc52fbd8ef2b3e08 269 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 9 191 2.2E-20 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 RPIT_12135 dac9c51a4da8d2d247ff91c5abef9df5 168 Pfam PF07681 DoxX 12 94 1.1E-15 T 13-10-2018 IPR032808 DoxX family RPIT_13035 4c714b0b16c027d3aecd3c5d3a855596 772 SUPERFAMILY SSF48208 316 395 1.47E-5 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 RPIT_13035 4c714b0b16c027d3aecd3c5d3a855596 772 Pfam PF06662 D-glucuronyl C5-epimerase C-terminus 327 482 2.1E-20 T 13-10-2018 IPR010598 D-glucuronyl C5-epimerase, C-terminal KEGG: 00534+5.1.3.17|MetaCyc: PWY-6558|Reactome: R-HSA-2022928 RPIT_03390 c3277c12615b51c2ac9302f63769f931 300 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 273 2.0E-29 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 RPIT_05255 89129ae86cfd2d9d1cfd3126ba792770 142 Pfam PF11253 Protein of unknown function (DUF3052) 15 138 2.4E-46 T 13-10-2018 IPR021412 Protein of unknown function DUF3052 RPIT_00275 27b5b067b475dbc8426629cd0aec470b 129 Pfam PF01810 LysE type translocator 17 89 4.3E-12 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 RPIT_05190 dcbd7a947b29b146739b32679e1afef3 174 Pfam PF11343 Protein of unknown function (DUF3145) 16 172 2.4E-65 T 13-10-2018 IPR021491 Protein of unknown function DUF3145 RPIT_12120 1cd946870d9576da60758d4b201deadb 466 Pfam PF09594 Glycosyltransferase family 87 139 392 7.2E-6 T 13-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 RPIT_14050 d860e401671e4ed33e9279b9fd41c121 326 Pfam PF04932 O-Antigen ligase 126 261 6.5E-11 T 13-10-2018 IPR007016 O-antigen ligase-related RPIT_12600 c98971cf238c7777bea3af39020c79ab 272 Pfam PF12679 ABC-2 family transporter protein 73 271 1.6E-9 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 RPIT_06105 c5e48f079cc8287a4f25ad82218cc8d1 118 Pfam PF11255 Protein of unknown function (DUF3054) 8 107 5.1E-23 T 13-10-2018 IPR021414 Protein of unknown function DUF3054 RPIT_02285 b2f2716499a6afeb4e127d0dd311d378 133 Pfam PF13586 Transposase DDE domain 36 131 5.4E-20 T 13-10-2018 IPR025668 Transposase DDE domain RPIT_00095 5e1dd78c6d3cc795779eaba374200f9c 204 Pfam PF02698 DUF218 domain 46 169 4.0E-21 T 13-10-2018 IPR003848 Domain of unknown function DUF218 RPIT_12235 d1ca07ff1b306f609391d9ece96ca05a 189 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 56 139 2.6E-12 T 13-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain RPIT_05930 2e796e2206c1bf6aaa54e38f8e834323 67 SUPERFAMILY SSF47598 3 58 5.34E-5 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 RPIT_11450 086a7311db8986e8730f26d7cfa70902 242 Pfam PF02517 CAAX protease self-immunity 143 227 7.0E-9 T 13-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 RPIT_13130 1e68c6dc841d606191fa0a23c2958a4f 146 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 19 137 3.4E-27 T 13-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III RPIT_11970 67f8c0b857b0d050c5c34a9102ad7084 204 Pfam PF08044 Domain of unknown function (DUF1707) 10 62 1.0E-17 T 13-10-2018 IPR012551 Protein of unknown function DUF1707 RPIT_13740 f7ad7f66ecdfd77febabf8ef6ac1d83d 388 Pfam PF07907 YibE/F-like protein 126 363 6.4E-68 T 13-10-2018 IPR012507 YibE/F-like RPIT_10650 5359436e84307bfb24c29f5f701b0a56 170 Gene3D G3DSA:2.40.50.140 86 163 2.7E-10 T 13-10-2018 RPIT_00260 7669e3399b65101c6af421e0b745be6f 353 SUPERFAMILY SSF69304 153 323 1.83E-6 T 13-10-2018 RPIT_05630 b61eef9607954942ac10eafa830e1ff6 194 Pfam PF11452 Protein of unknown function (DUF3000) 10 186 1.2E-63 T 13-10-2018 IPR021555 Protein of unknown function DUF3000 RPIT_12830 493d9b507f3766e5e5618376280be915 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 315 1.9E-42 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 RPIT_04425 41e1b720702d05691e346675c3386018 105 Pfam PF11298 Protein of unknown function (DUF3099) 9 74 1.9E-22 T 13-10-2018 IPR021449 Protein of unknown function DUF3099 RPIT_02360 b66ed3c28898f3e95ee7c230f6908476 628 Pfam PF02687 FtsX-like permease family 524 616 2.5E-7 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 RPIT_13830 506ed5612721d77e699a62e61a404543 370 Pfam PF04230 Polysaccharide pyruvyl transferase 14 311 8.3E-25 T 13-10-2018 IPR007345 Polysaccharide pyruvyl transferase RPIT_07425 41a08baea1a48559eea0cb739676ce4c 209 Pfam PF08044 Domain of unknown function (DUF1707) 11 62 1.5E-10 T 13-10-2018 IPR012551 Protein of unknown function DUF1707