locus-tag class description BKM78_00020 PF03462 PCRF domain BKM78_00020 PF00472 RF-1 domain BKM78_00025 PF00005 ABC transporter BKM78_00030 PF02687 FtsX-like permease family BKM78_00030 PF18075 FtsX extracellular domain BKM78_00035 PF01551 Peptidase family M23 BKM78_00035 PF04225 Opacity-associated protein A LysM-like domain BKM78_00040 PF01668 SmpB protein BKM78_00070 PF18766 SWI2/SNF2 ATPase BKM78_00070 PF11867 Domain of unknown function (DUF3387) BKM78_00070 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BKM78_00105 PF13784 Fic/DOC family N-terminal BKM78_00105 PF02661 Fic/DOC family BKM78_00120 PF02622 Uncharacterized ACR, COG1678 BKM78_00125 PF00486 Transcriptional regulatory protein, C terminal BKM78_00125 PF00072 Response regulator receiver domain BKM78_00130 PF00512 His Kinase A (phospho-acceptor) domain BKM78_00130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKM78_00130 PF00672 HAMP domain BKM78_00135 PF10647 Lipoprotein LpqB beta-propeller domain BKM78_00135 PF10646 Sporulation and spore germination BKM78_00140 PF00156 Phosphoribosyl transferase domain BKM78_00145 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BKM78_00145 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BKM78_00150 PF01043 SecA preprotein cross-linking domain BKM78_00150 PF07516 SecA Wing and Scaffold domain BKM78_00150 PF07517 SecA DEAD-like domain BKM78_00175 PF02735 Ku70/Ku80 beta-barrel domain BKM78_00185 PF02811 PHP domain BKM78_00190 PF00579 tRNA synthetases class I (W and Y) BKM78_00195 PF00270 DEAD/DEAH box helicase BKM78_00195 PF00271 Helicase conserved C-terminal domain BKM78_00210 PF04679 ATP dependent DNA ligase C terminal region BKM78_00210 PF01068 ATP dependent DNA ligase domain BKM78_00210 PF13298 DNA polymerase Ligase (LigD) BKM78_00215 PF00580 UvrD/REP helicase N-terminal domain BKM78_00215 PF13361 UvrD-like helicase C-terminal domain BKM78_00220 PF00580 UvrD/REP helicase N-terminal domain BKM78_00220 PF13361 UvrD-like helicase C-terminal domain BKM78_00225 PF09297 NADH pyrophosphatase zinc ribbon domain BKM78_00225 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BKM78_00225 PF00293 NUDIX domain BKM78_00235 PF00204 DNA gyrase B BKM78_00235 PF01751 Toprim domain BKM78_00235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKM78_00235 PF00986 DNA gyrase B subunit, carboxyl terminus BKM78_00240 PF02589 LUD domain BKM78_00245 PF11870 Domain of unknown function (DUF3390) BKM78_00245 PF13183 4Fe-4S dicluster domain BKM78_00245 PF02589 LUD domain BKM78_00250 PF02754 Cysteine-rich domain BKM78_00255 PF02652 L-lactate permease BKM78_00260 PF07729 FCD domain BKM78_00260 PF00392 Bacterial regulatory proteins, gntR family BKM78_00265 PF00484 Carbonic anhydrase BKM78_00270 PF00521 DNA gyrase/topoisomerase IV, subunit A BKM78_00270 PF03989 DNA gyrase C-terminal domain, beta-propeller BKM78_00295 PF00265 Thymidine kinase BKM78_00300 PF11268 Protein of unknown function (DUF3071) BKM78_00320 PF00692 dUTPase BKM78_00335 PF02254 TrkA-N domain BKM78_00335 PF02080 TrkA-C domain BKM78_00340 PF02080 TrkA-C domain BKM78_00340 PF02254 TrkA-N domain BKM78_00345 PF13520 Amino acid permease BKM78_00350 PF01938 TRAM domain BKM78_00350 PF05958 tRNA (Uracil-5-)-methyltransferase BKM78_00355 PF00694 Aconitase C-terminal domain BKM78_00355 PF00330 Aconitase family (aconitate hydratase) BKM78_00365 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BKM78_00365 PF02780 Transketolase, C-terminal domain BKM78_00365 PF02779 Transketolase, pyrimidine binding domain BKM78_00380 PF01641 SelR domain BKM78_00430 PF01300 Telomere recombination BKM78_00435 PF00248 Aldo/keto reductase family BKM78_00450 PF00365 Phosphofructokinase BKM78_00455 PF03328 HpcH/HpaI aldolase/citrate lyase family BKM78_00460 PF02449 Beta-galactosidase BKM78_00460 PF08533 Beta-galactosidase C-terminal domain BKM78_00460 PF08532 Beta-galactosidase trimerisation domain BKM78_00470 PF03631 Virulence factor BrkB BKM78_00475 PF13411 MerR HTH family regulatory protein BKM78_00480 PF02577 Bifunctional nuclease BKM78_00485 PF00376 MerR family regulatory protein BKM78_00490 PF00498 FHA domain BKM78_00500 PF06947 Protein of unknown function (DUF1290) BKM78_00510 PF01066 CDP-alcohol phosphatidyltransferase BKM78_00515 PF13439 Glycosyltransferase Family 4 BKM78_00520 PF03279 Bacterial lipid A biosynthesis acyltransferase BKM78_00525 PF01230 HIT domain BKM78_00530 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BKM78_00530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BKM78_00530 PF03129 Anticodon binding domain BKM78_00540 PF04073 Aminoacyl-tRNA editing domain BKM78_00545 PF00892 EamA-like transporter family BKM78_00560 PF02378 Phosphotransferase system, EIIC BKM78_00560 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BKM78_00560 PF00367 phosphotransferase system, EIIB BKM78_00565 PF00248 Aldo/keto reductase family BKM78_00575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BKM78_00575 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKM78_00580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BKM78_00585 PF08543 Phosphomethylpyrimidine kinase BKM78_00595 PF13397 RNA polymerase-binding protein BKM78_00600 PF04186 FxsA cytoplasmic membrane protein BKM78_00605 PF00535 Glycosyl transferase family 2 BKM78_00610 PF00535 Glycosyl transferase family 2 BKM78_00610 PF00795 Carbon-nitrogen hydrolase BKM78_00615 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BKM78_00615 PF01367 5'-3' exonuclease, C-terminal SAM fold BKM78_00620 PF07021 Methionine biosynthesis protein MetW BKM78_00620 PF00561 alpha/beta hydrolase fold BKM78_00625 PF00561 alpha/beta hydrolase fold BKM78_00640 PF01053 Cys/Met metabolism PLP-dependent enzyme BKM78_00650 PF03313 Serine dehydratase alpha chain BKM78_00650 PF03315 Serine dehydratase beta chain BKM78_00655 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKM78_00670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKM78_00670 PF08448 PAS fold BKM78_00670 PF13426 PAS domain BKM78_00670 PF00072 Response regulator receiver domain BKM78_00670 PF00512 His Kinase A (phospho-acceptor) domain BKM78_00675 PF05532 CsbD-like BKM78_00685 PF04545 Sigma-70, region 4 BKM78_00685 PF04539 Sigma-70 region 3 BKM78_00685 PF04542 Sigma-70 region 2 BKM78_00690 PF01370 NAD dependent epimerase/dehydratase family BKM78_00690 PF08338 Domain of unknown function (DUF1731) BKM78_00700 PF01928 CYTH domain BKM78_00700 PF05235 CHAD domain BKM78_00705 PF00571 CBS domain BKM78_00705 PF00005 ABC transporter BKM78_00710 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_00715 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_00720 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BKM78_00730 PF02386 Cation transport protein BKM78_00735 PF00313 'Cold-shock' DNA-binding domain BKM78_00740 PF07731 Multicopper oxidase BKM78_00740 PF07732 Multicopper oxidase BKM78_00740 PF00394 Multicopper oxidase BKM78_00745 PF05974 Domain of unknown function (DUF892) BKM78_00755 PF05532 CsbD-like BKM78_00760 PF00005 ABC transporter BKM78_00765 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKM78_00770 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_00775 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_00795 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BKM78_00795 PF01926 50S ribosome-binding GTPase BKM78_00800 PF02224 Cytidylate kinase BKM78_00815 PF02965 Vitamin B12 dependent methionine synthase, activation domain BKM78_00815 PF02574 Homocysteine S-methyltransferase BKM78_00815 PF02607 B12 binding domain BKM78_00815 PF02310 B12 binding domain BKM78_00815 PF00809 Pterin binding enzyme BKM78_00825 PF00834 Ribulose-phosphate 3 epimerase family BKM78_00830 PF01029 NusB family BKM78_00830 PF01189 16S rRNA methyltransferase RsmB/F BKM78_00835 PF00551 Formyl transferase BKM78_00835 PF02911 Formyl transferase, C-terminal domain BKM78_00840 PF17764 3′ DNA-binding domain (3′BD) BKM78_00845 PF02773 S-adenosylmethionine synthetase, C-terminal domain BKM78_00845 PF02772 S-adenosylmethionine synthetase, central domain BKM78_00845 PF00438 S-adenosylmethionine synthetase, N-terminal domain BKM78_00850 PF01192 RNA polymerase Rpb6 BKM78_00855 PF00625 Guanylate kinase BKM78_00865 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BKM78_00870 PF01180 Dihydroorotate dehydrogenase BKM78_00875 PF02142 MGS-like domain BKM78_00875 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BKM78_00875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BKM78_00880 PF00117 Glutamine amidotransferase class-I BKM78_00880 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BKM78_00885 PF01029 NusB family BKM78_00890 PF08207 Elongation factor P (EF-P) KOW-like domain BKM78_00890 PF01132 Elongation factor P (EF-P) OB domain BKM78_00890 PF09285 Elongation factor P, C-terminal BKM78_00895 PF01761 3-dehydroquinate synthase BKM78_00900 PF01202 Shikimate kinase BKM78_00905 PF01264 Chorismate synthase BKM78_00910 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BKM78_00910 PF01488 Shikimate / quinate 5-dehydrogenase BKM78_00910 PF08501 Shikimate dehydrogenase substrate binding domain BKM78_00920 PF03652 Holliday junction resolvase BKM78_00925 PF02272 DHHA1 domain BKM78_00925 PF01411 tRNA synthetases class II (A) BKM78_00925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BKM78_00940 PF16193 AAA C-terminal domain BKM78_00940 PF12002 MgsA AAA+ ATPase C terminal BKM78_00940 PF00004 ATPase family associated with various cellular activities (AAA) BKM78_00945 PF07690 Major Facilitator Superfamily BKM78_00950 PF02938 GAD domain BKM78_00950 PF00152 tRNA synthetases class II (D, K and N) BKM78_00950 PF01336 OB-fold nucleic acid binding domain BKM78_00955 PF13393 Histidyl-tRNA synthetase BKM78_00955 PF03129 Anticodon binding domain BKM78_00960 PF00753 Metallo-beta-lactamase superfamily BKM78_00965 PF03993 Domain of Unknown Function (DUF349) BKM78_00970 PF13291 ACT domain BKM78_00970 PF04607 Region found in RelA / SpoT proteins BKM78_00970 PF02824 TGS domain BKM78_00980 PF00156 Phosphoribosyl transferase domain BKM78_00985 PF02355 Protein export membrane protein BKM78_00985 PF07549 SecD/SecF GG Motif BKM78_00990 PF07549 SecD/SecF GG Motif BKM78_00990 PF02355 Protein export membrane protein BKM78_00995 PF02699 Preprotein translocase subunit BKM78_01000 PF13344 Haloacid dehalogenase-like hydrolase BKM78_01005 PF05496 Holliday junction DNA helicase RuvB P-loop domain BKM78_01005 PF05491 RuvB C-terminal winged helix domain BKM78_01005 PF17864 RuvB AAA lid domain BKM78_01010 PF01330 RuvA N terminal domain BKM78_01010 PF07499 RuvA, C-terminal domain BKM78_01015 PF02075 Crossover junction endodeoxyribonuclease RuvC BKM78_01020 PF01709 Transcriptional regulator BKM78_01045 PF00977 Histidine biosynthesis protein BKM78_01050 PF00117 Glutamine amidotransferase class-I BKM78_01055 PF00475 Imidazoleglycerol-phosphate dehydratase BKM78_01060 PF00155 Aminotransferase class I and II BKM78_01065 PF00815 Histidinol dehydrogenase BKM78_01075 PF07733 Bacterial DNA polymerase III alpha NTPase domain BKM78_01075 PF14579 Helix-hairpin-helix motif BKM78_01075 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BKM78_01075 PF02811 PHP domain BKM78_01080 PF06826 Predicted Permease Membrane Region BKM78_01080 PF02080 TrkA-C domain BKM78_01090 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BKM78_01090 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKM78_01095 PF04898 Glutamate synthase central domain BKM78_01095 PF01493 GXGXG motif BKM78_01095 PF01645 Conserved region in glutamate synthase BKM78_01095 PF00310 Glutamine amidotransferases class-II BKM78_01100 PF02903 Alpha amylase, N-terminal ig-like domain BKM78_01100 PF00128 Alpha amylase, catalytic domain BKM78_01105 PF02630 SCO1/SenC BKM78_01110 PF00290 Tryptophan synthase alpha chain BKM78_01115 PF00291 Pyridoxal-phosphate dependent enzyme BKM78_01120 PF00218 Indole-3-glycerol phosphate synthase BKM78_01135 PF00425 chorismate binding enzyme BKM78_01135 PF04715 Anthranilate synthase component I, N terminal region BKM78_01140 PF01502 Phosphoribosyl-AMP cyclohydrolase BKM78_01185 PF03992 Antibiotic biosynthesis monooxygenase BKM78_01190 PF02637 GatB domain BKM78_01190 PF02934 GatB/GatE catalytic domain BKM78_01195 PF01425 Amidase BKM78_01200 PF02686 Glu-tRNAGln amidotransferase C subunit BKM78_01230 PF00266 Aminotransferase class-V BKM78_01235 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BKM78_01235 PF00128 Alpha amylase, catalytic domain BKM78_01240 PF11896 Domain of unknown function (DUF3416) BKM78_01245 PF18085 Maltokinase N-terminal cap domain BKM78_01245 PF01636 Phosphotransferase enzyme family BKM78_01250 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BKM78_01250 PF00128 Alpha amylase, catalytic domain BKM78_01250 PF02806 Alpha amylase, C-terminal all-beta domain BKM78_01260 PF00690 Cation transporter/ATPase, N-terminus BKM78_01260 PF00689 Cation transporting ATPase, C-terminus BKM78_01265 PF00128 Alpha amylase, catalytic domain BKM78_01270 PF00128 Alpha amylase, catalytic domain BKM78_01270 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BKM78_01280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BKM78_01280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BKM78_01280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BKM78_01280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BKM78_01300 PF01594 AI-2E family transporter BKM78_01305 PF01939 Endonuclease NucS BKM78_01315 PF00561 alpha/beta hydrolase fold BKM78_01320 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BKM78_01325 PF01923 Cobalamin adenosyltransferase BKM78_01335 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BKM78_01340 PF02874 ATP synthase alpha/beta family, beta-barrel domain BKM78_01340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKM78_01345 PF00231 ATP synthase BKM78_01350 PF00306 ATP synthase alpha/beta chain, C terminal domain BKM78_01350 PF02874 ATP synthase alpha/beta family, beta-barrel domain BKM78_01350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKM78_01355 PF00213 ATP synthase delta (OSCP) subunit BKM78_01360 PF00430 ATP synthase B/B' CF(0) BKM78_01365 PF00137 ATP synthase subunit C BKM78_01370 PF00119 ATP synthase A chain BKM78_01385 PF00953 Glycosyl transferase family 4 BKM78_01390 PF01300 Telomere recombination BKM78_01395 PF13649 Methyltransferase domain BKM78_01395 PF17827 PrmC N-terminal domain BKM78_01400 PF03462 PCRF domain BKM78_01400 PF00472 RF-1 domain BKM78_01405 PF01197 Ribosomal protein L31 BKM78_01410 PF02371 Transposase IS116/IS110/IS902 family BKM78_01410 PF01548 Transposase BKM78_01415 PF07498 Rho termination factor, N-terminal domain BKM78_01415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKM78_01415 PF07497 Rho termination factor, RNA-binding domain BKM78_01420 PF08544 GHMP kinases C terminal BKM78_01420 PF00288 GHMP kinases N terminal domain BKM78_01425 PF01842 ACT domain BKM78_01425 PF00742 Homoserine dehydrogenase BKM78_01425 PF03447 Homoserine dehydrogenase, NAD binding domain BKM78_01430 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BKM78_01430 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BKM78_01450 PF16870 2-oxoglutarate dehydrogenase C-terminal BKM78_01450 PF16078 2-oxoglutarate dehydrogenase N-terminus BKM78_01450 PF02779 Transketolase, pyrimidine binding domain BKM78_01450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BKM78_01450 PF00676 Dehydrogenase E1 component BKM78_01460 PF00288 GHMP kinases N terminal domain BKM78_01460 PF10509 Galactokinase galactose-binding signature BKM78_01460 PF08544 GHMP kinases C terminal BKM78_01470 PF02467 Transcription factor WhiB BKM78_01480 PF12282 Signal transduction histidine kinase BKM78_01480 PF07568 Histidine kinase BKM78_01480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKM78_01490 PF08281 Sigma-70, region 4 BKM78_01490 PF04542 Sigma-70 region 2 BKM78_01495 PF02586 SOS response associated peptidase (SRAP) BKM78_01505 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BKM78_01510 PF03193 RsgA GTPase BKM78_01515 PF00459 Inositol monophosphatase family BKM78_01520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKM78_01520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKM78_01525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKM78_01525 PF00005 ABC transporter BKM78_01530 PF00005 ABC transporter BKM78_01530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKM78_01535 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_01535 PF12911 N-terminal TM domain of oligopeptide transport permease C BKM78_01540 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_01545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKM78_01560 PF00248 Aldo/keto reductase family BKM78_01580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKM78_01580 PF14824 Sirohaem biosynthesis protein central BKM78_01580 PF10414 Sirohaem synthase dimerisation region BKM78_01585 PF00300 Histidine phosphatase superfamily (branch 1) BKM78_01590 PF02514 CobN/Magnesium Chelatase BKM78_01595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKM78_01600 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BKM78_01600 PF07685 CobB/CobQ-like glutamine amidotransferase domain BKM78_01605 PF02571 Precorrin-6x reductase CbiJ/CobK BKM78_01610 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BKM78_01630 PF03186 CobD/Cbib protein BKM78_01635 PF02654 Cobalamin-5-phosphate synthase BKM78_01650 PF12557 Cob(I)alamin adenosyltransferase N terminal BKM78_01650 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BKM78_01655 PF13519 von Willebrand factor type A domain BKM78_01655 PF07728 AAA domain (dynein-related subfamily) BKM78_01655 PF17863 AAA lid domain BKM78_01660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKM78_01665 PF00881 Nitroreductase family BKM78_01670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKM78_01675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKM78_01680 PF02570 Precorrin-8X methylmutase BKM78_01695 PF00248 Aldo/keto reductase family BKM78_01715 PF03699 Uncharacterised protein family (UPF0182) BKM78_01740 PF13361 UvrD-like helicase C-terminal domain BKM78_01740 PF00580 UvrD/REP helicase N-terminal domain BKM78_01740 PF00570 HRDC domain BKM78_01745 PF17946 RecC C-terminal domain BKM78_01750 PF00580 UvrD/REP helicase N-terminal domain BKM78_01750 PF12705 PD-(D/E)XK nuclease superfamily BKM78_01750 PF13361 UvrD-like helicase C-terminal domain BKM78_01755 PF13538 UvrD-like helicase C-terminal domain BKM78_01760 PF00155 Aminotransferase class I and II BKM78_01765 PF04107 Glutamate-cysteine ligase family 2(GCS2) BKM78_01775 PF04542 Sigma-70 region 2 BKM78_01775 PF00140 Sigma-70 factor, region 1.2 BKM78_01775 PF04539 Sigma-70 region 3 BKM78_01775 PF04545 Sigma-70, region 4 BKM78_01780 PF04545 Sigma-70, region 4 BKM78_01780 PF04542 Sigma-70 region 2 BKM78_01780 PF04539 Sigma-70 region 3 BKM78_01780 PF00140 Sigma-70 factor, region 1.2 BKM78_01790 PF11898 Domain of unknown function (DUF3418) BKM78_01790 PF00270 DEAD/DEAH box helicase BKM78_01790 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BKM78_01790 PF00271 Helicase conserved C-terminal domain BKM78_01790 PF04408 Helicase associated domain (HA2) BKM78_01795 PF00582 Universal stress protein family BKM78_01820 PF01544 CorA-like Mg2+ transporter protein BKM78_01825 PF00920 Dehydratase family BKM78_01830 PF00581 Rhodanese-like domain BKM78_01835 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKM78_01835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BKM78_01845 PF02867 Ribonucleotide reductase, barrel domain BKM78_01845 PF08471 Class II vitamin B12-dependent ribonucleotide reductase BKM78_01850 PF03477 ATP cone domain BKM78_01860 PF01726 LexA DNA binding domain BKM78_01860 PF00717 Peptidase S24-like BKM78_01865 PF13307 Helicase C-terminal domain BKM78_01870 PF01926 50S ribosome-binding GTPase BKM78_01870 PF13167 GTP-binding GTPase N-terminal BKM78_01870 PF16360 GTP-binding GTPase Middle Region BKM78_01875 PF01678 Diaminopimelate epimerase BKM78_01890 PF00919 Uncharacterized protein family UPF0004 BKM78_01890 PF04055 Radical SAM superfamily BKM78_01895 PF01263 Aldose 1-epimerase BKM78_01900 PF01966 HD domain BKM78_01900 PF12072 Domain of unknown function (DUF3552) BKM78_01900 PF00013 KH domain BKM78_01905 PF02631 RecX family BKM78_01910 PF00154 recA bacterial DNA recombination protein BKM78_01920 PF00455 DeoR C terminal sensor domain BKM78_01920 PF08220 DeoR-like helix-turn-helix domain BKM78_01930 PF02464 Competence-damaged protein BKM78_01930 PF18146 Damage-inducible protein CinA KH domain BKM78_01930 PF00994 Probable molybdopterin binding domain BKM78_01940 PF00919 Uncharacterized protein family UPF0004 BKM78_01940 PF18693 TRAM domain BKM78_01940 PF04055 Radical SAM superfamily BKM78_01945 PF01580 FtsK/SpoIIIE family BKM78_01945 PF17854 FtsK alpha domain BKM78_01945 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BKM78_01945 PF09397 Ftsk gamma domain BKM78_01950 PF00586 AIR synthase related protein, N-terminal domain BKM78_01950 PF02769 AIR synthase related protein, C-terminal domain BKM78_01955 PF07478 D-ala D-ala ligase C-terminus BKM78_01955 PF01820 D-ala D-ala ligase N-terminus BKM78_01960 PF01553 Acyltransferase BKM78_01980 PF13673 Acetyltransferase (GNAT) domain BKM78_02010 PF00581 Rhodanese-like domain BKM78_02025 PF00266 Aminotransferase class-V BKM78_02030 PF01872 RibD C-terminal domain BKM78_02050 PF13302 Acetyltransferase (GNAT) domain BKM78_02060 PF12796 Ankyrin repeats (3 copies) BKM78_02085 PF02311 AraC-like ligand binding domain BKM78_02085 PF12833 Helix-turn-helix domain BKM78_02100 PF00857 Isochorismatase family BKM78_02110 PF01381 Helix-turn-helix BKM78_02165 PF00106 short chain dehydrogenase BKM78_02170 PF00580 UvrD/REP helicase N-terminal domain BKM78_02170 PF13361 UvrD-like helicase C-terminal domain BKM78_02185 PF07669 Eco57I restriction-modification methylase BKM78_02200 PF00176 SNF2 family N-terminal domain BKM78_02200 PF00271 Helicase conserved C-terminal domain BKM78_02200 PF12137 RNA polymerase recycling family C-terminal BKM78_02200 PF18337 RapA N-terminal Tudor like domain BKM78_02200 PF18339 RapA N-terminal Tudor like domain 1 BKM78_02205 PF02733 Dak1 domain BKM78_02235 PF03466 LysR substrate binding domain BKM78_02235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKM78_02240 PF03601 Conserved hypothetical protein 698 BKM78_02260 PF00694 Aconitase C-terminal domain BKM78_02265 PF00330 Aconitase family (aconitate hydratase) BKM78_02270 PF01614 Bacterial transcriptional regulator BKM78_02270 PF09339 IclR helix-turn-helix domain BKM78_02290 PF02517 CPBP intramembrane metalloprotease BKM78_02295 PF01557 Fumarylacetoacetate (FAA) hydrolase family BKM78_02300 PF08502 LeuA allosteric (dimerisation) domain BKM78_02300 PF00682 HMGL-like BKM78_02305 PF00180 Isocitrate/isopropylmalate dehydrogenase BKM78_02310 PF08240 Alcohol dehydrogenase GroES-like domain BKM78_02310 PF00107 Zinc-binding dehydrogenase BKM78_02315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BKM78_02315 PF02378 Phosphotransferase system, EIIC BKM78_02315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BKM78_02320 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BKM78_02320 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BKM78_02325 PF10369 Small subunit of acetolactate synthase BKM78_02330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKM78_02330 PF00205 Thiamine pyrophosphate enzyme, central domain BKM78_02330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKM78_02340 PF01230 HIT domain BKM78_02345 PF00977 Histidine biosynthesis protein BKM78_02350 PF00270 DEAD/DEAH box helicase BKM78_02350 PF08148 DSHCT (NUC185) domain BKM78_02350 PF00271 Helicase conserved C-terminal domain BKM78_02355 PF00781 Diacylglycerol kinase catalytic domain BKM78_02360 PF00902 Sec-independent protein translocase protein (TatC) BKM78_02365 PF02416 mttA/Hcf106 family BKM78_02375 PF13280 WYL domain BKM78_02380 PF13280 WYL domain BKM78_02385 PF00749 tRNA synthetases class I (E and Q), catalytic domain BKM78_02390 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BKM78_02390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BKM78_02395 PF00849 RNA pseudouridylate synthase BKM78_02395 PF01479 S4 domain BKM78_02400 PF04079 Segregation and condensation complex subunit ScpB BKM78_02405 PF02616 Segregation and condensation protein ScpA BKM78_02415 PF13614 AAA domain BKM78_02420 PF00589 Phage integrase family BKM78_02420 PF02899 Phage integrase, N-terminal SAM-like domain BKM78_02430 PF06418 CTP synthase N-terminus BKM78_02430 PF00117 Glutamine amidotransferase class-I BKM78_02435 PF02463 RecF/RecN/SMC N terminal domain BKM78_02440 PF01513 ATP-NAD kinase BKM78_02445 PF01479 S4 domain BKM78_02445 PF01728 FtsJ-like methyltransferase BKM78_02455 PF13344 Haloacid dehalogenase-like hydrolase BKM78_02490 PF00579 tRNA synthetases class I (W and Y) BKM78_02495 PF00206 Lyase BKM78_02495 PF14698 Argininosuccinate lyase C-terminal BKM78_02500 PF01316 Arginine repressor, DNA binding domain BKM78_02500 PF02863 Arginine repressor, C-terminal domain BKM78_02505 PF00202 Aminotransferase class-III BKM78_02510 PF00696 Amino acid kinase family BKM78_02515 PF01960 ArgJ family BKM78_02520 PF01118 Semialdehyde dehydrogenase, NAD binding domain BKM78_02520 PF02774 Semialdehyde dehydrogenase, dimerisation domain BKM78_02540 PF00474 Sodium:solute symporter family BKM78_02545 PF07690 Major Facilitator Superfamily BKM78_02550 PF00067 Cytochrome P450 BKM78_02555 PF00440 Bacterial regulatory proteins, tetR family BKM78_02555 PF02909 Tetracyclin repressor-like, C-terminal domain BKM78_02565 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BKM78_02565 PF03484 tRNA synthetase B5 domain BKM78_02565 PF03147 Ferredoxin-fold anticodon binding domain BKM78_02565 PF03483 B3/4 domain BKM78_02565 PF01588 Putative tRNA binding domain BKM78_02570 PF01409 tRNA synthetases class II core domain (F) BKM78_02570 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BKM78_02575 PF00588 SpoU rRNA Methylase family BKM78_02575 PF08032 RNA 2'-O ribose methyltransferase substrate binding BKM78_02580 PF00453 Ribosomal protein L20 BKM78_02585 PF01632 Ribosomal protein L35 BKM78_02590 PF05198 Translation initiation factor IF-3, N-terminal domain BKM78_02590 PF00707 Translation initiation factor IF-3, C-terminal domain BKM78_02610 PF01634 ATP phosphoribosyltransferase BKM78_02610 PF08029 HisG, C-terminal domain BKM78_02615 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BKM78_02620 PF01406 tRNA synthetases class I (C) catalytic domain BKM78_02640 PF02673 Bacitracin resistance protein BacA BKM78_02645 PF00248 Aldo/keto reductase family BKM78_02660 PF00589 Phage integrase family BKM78_02660 PF02899 Phage integrase, N-terminal SAM-like domain BKM78_02665 PF04542 Sigma-70 region 2 BKM78_02665 PF08281 Sigma-70, region 4 BKM78_02675 PF01548 Transposase BKM78_02675 PF02371 Transposase IS116/IS110/IS902 family BKM78_02700 PF00872 Transposase, Mutator family BKM78_02705 PF02384 N-6 DNA Methylase BKM78_02730 PF01443 Viral (Superfamily 1) RNA helicase BKM78_02730 PF03389 MobA/MobL family BKM78_02730 PF17841 BID domain of Bartonella effector protein (Bep) BKM78_02770 PF10137 Predicted nucleotide-binding protein containing TIR-like domain BKM78_02790 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKM78_02790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BKM78_02795 PF09278 MerR, DNA binding BKM78_02795 PF00376 MerR family regulatory protein BKM78_02810 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BKM78_02810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKM78_02810 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BKM78_02810 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BKM78_02810 PF10371 Domain of unknown function BKM78_02825 PF00486 Transcriptional regulatory protein, C terminal BKM78_02825 PF00072 Response regulator receiver domain BKM78_02855 PF16916 Dimerisation domain of Zinc Transporter BKM78_02855 PF01545 Cation efflux family BKM78_02860 PF08534 Redoxin BKM78_02865 PF02683 Cytochrome C biogenesis protein transmembrane region BKM78_02885 PF00072 Response regulator receiver domain BKM78_02885 PF00486 Transcriptional regulatory protein, C terminal BKM78_02890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKM78_02890 PF00512 His Kinase A (phospho-acceptor) domain BKM78_02890 PF00672 HAMP domain BKM78_02910 PF01790 Prolipoprotein diacylglyceryl transferase BKM78_02915 PF00403 Heavy-metal-associated domain BKM78_02930 PF13276 HTH-like domain BKM78_02930 PF00665 Integrase core domain BKM78_02935 PF01527 Transposase BKM78_02940 PF00403 Heavy-metal-associated domain BKM78_02945 PF02583 Metal-sensitive transcriptional repressor BKM78_02965 PF00005 ABC transporter BKM78_02965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKM78_02970 PF00005 ABC transporter BKM78_02970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKM78_02980 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_02985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKM78_03000 PF13401 AAA domain BKM78_03010 PF02796 Helix-turn-helix domain of resolvase BKM78_03010 PF00239 Resolvase, N terminal domain BKM78_03015 PF01022 Bacterial regulatory protein, arsR family BKM78_03045 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BKM78_03045 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BKM78_03045 PF10371 Domain of unknown function BKM78_03045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKM78_03045 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BKM78_03065 PF00274 Fructose-bisphosphate aldolase class-I BKM78_03085 PF13419 Haloacid dehalogenase-like hydrolase BKM78_03105 PF00005 ABC transporter BKM78_03120 PF02481 DNA recombination-mediator protein A BKM78_03120 PF18255 DNA processing protein A sterile alpha motif domain BKM78_03125 PF01078 Magnesium chelatase, subunit ChlI BKM78_03125 PF13335 Magnesium chelatase, subunit ChlI C-terminal BKM78_03130 PF02021 Uncharacterised protein family UPF0102 BKM78_03135 PF10611 Protein of unknown function (DUF2469) BKM78_03140 PF01351 Ribonuclease HII BKM78_03145 PF10502 Signal peptidase, peptidase S26 BKM78_03150 PF01245 Ribosomal protein L19 BKM78_03155 PF13085 2Fe-2S iron-sulfur cluster binding domain BKM78_03155 PF13183 4Fe-4S dicluster domain BKM78_03160 PF02910 Fumarate reductase flavoprotein C-term BKM78_03160 PF00890 FAD binding domain BKM78_03170 PF01746 tRNA (Guanine-1)-methyltransferase BKM78_03175 PF01782 RimM N-terminal domain BKM78_03175 PF05239 PRC-barrel domain BKM78_03185 PF00886 Ribosomal protein S16 BKM78_03200 PF01979 Amidohydrolase family BKM78_03205 PF02881 SRP54-type protein, helical bundle domain BKM78_03205 PF02978 Signal peptide binding domain BKM78_03205 PF00448 SRP54-type protein, GTPase domain BKM78_03210 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BKM78_03210 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BKM78_03210 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BKM78_03215 PF02233 NAD(P) transhydrogenase beta subunit BKM78_03220 PF07730 Histidine kinase BKM78_03225 PF00072 Response regulator receiver domain BKM78_03225 PF00196 Bacterial regulatory proteins, luxR family BKM78_03235 PF00005 ABC transporter BKM78_03240 PF00448 SRP54-type protein, GTPase domain BKM78_03240 PF02881 SRP54-type protein, helical bundle domain BKM78_03250 PF06470 SMC proteins Flexible Hinge Domain BKM78_03250 PF02463 RecF/RecN/SMC N terminal domain BKM78_03260 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BKM78_03260 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BKM78_03260 PF06827 Zinc finger found in FPG and IleRS BKM78_03265 PF14622 Ribonuclease-III-like BKM78_03265 PF00035 Double-stranded RNA binding motif BKM78_03270 PF01783 Ribosomal L32p protein family BKM78_03275 PF02620 Large ribosomal RNA subunit accumulation protein YceD BKM78_03285 PF01467 Cytidylyltransferase-like BKM78_03295 PF17191 RecG wedge domain BKM78_03295 PF00271 Helicase conserved C-terminal domain BKM78_03295 PF00270 DEAD/DEAH box helicase BKM78_03300 PF00830 Ribosomal L28 family BKM78_03305 PF10150 Ribonuclease E/G family BKM78_03315 PF08903 Domain of unknown function (DUF1846) BKM78_03325 PF00334 Nucleoside diphosphate kinase BKM78_03335 PF02875 Mur ligase family, glutamate ligase domain BKM78_03335 PF08245 Mur ligase middle domain BKM78_03345 PF08264 Anticodon-binding domain of tRNA BKM78_03345 PF00133 tRNA synthetases class I (I, L, M and V) BKM78_03355 PF00356 Bacterial regulatory proteins, lacI family BKM78_03360 PF04030 D-arabinono-1,4-lactone oxidase BKM78_03360 PF01565 FAD binding domain BKM78_03365 PF07676 WD40-like Beta Propeller Repeat BKM78_03365 PF03572 Peptidase family S41 BKM78_03365 PF14684 Tricorn protease C1 domain BKM78_03365 PF14685 Tricorn protease PDZ domain BKM78_03370 PF01068 ATP dependent DNA ligase domain BKM78_03370 PF04679 ATP dependent DNA ligase C terminal region BKM78_03375 PF06689 ClpX C4-type zinc finger BKM78_03375 PF10431 C-terminal, D2-small domain, of ClpB protein BKM78_03375 PF07724 AAA domain (Cdc48 subfamily) BKM78_03380 PF00574 Clp protease BKM78_03385 PF00574 Clp protease BKM78_03390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BKM78_03390 PF05698 Bacterial trigger factor protein (TF) C-terminus BKM78_03390 PF05697 Bacterial trigger factor protein (TF) BKM78_03405 PF07804 HipA-like C-terminal domain BKM78_03405 PF13657 HipA N-terminal domain BKM78_03420 PF05336 L-rhamnose mutarotase BKM78_03430 PF03636 Glycosyl hydrolase family 65, N-terminal domain BKM78_03430 PF03633 Glycosyl hydrolase family 65, C-terminal domain BKM78_03430 PF03632 Glycosyl hydrolase family 65 central catalytic domain BKM78_03435 PF13419 Haloacid dehalogenase-like hydrolase BKM78_03440 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BKM78_03440 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BKM78_03440 PF06827 Zinc finger found in FPG and IleRS BKM78_03445 PF02502 Ribose/Galactose Isomerase BKM78_03450 PF12826 Helix-hairpin-helix motif BKM78_03450 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BKM78_03450 PF03120 NAD-dependent DNA ligase OB-fold domain BKM78_03450 PF01653 NAD-dependent DNA ligase adenylation domain BKM78_03450 PF00533 BRCA1 C Terminus (BRCT) domain BKM78_03455 PF11838 ERAP1-like C-terminal domain BKM78_03455 PF01433 Peptidase family M1 domain BKM78_03465 PF00156 Phosphoribosyl transferase domain BKM78_03470 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BKM78_03470 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BKM78_03475 PF01979 Amidohydrolase family BKM78_03490 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKM78_03490 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BKM78_03500 PF00271 Helicase conserved C-terminal domain BKM78_03500 PF08494 DEAD/H associated BKM78_03500 PF00270 DEAD/DEAH box helicase BKM78_03505 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BKM78_03505 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BKM78_03510 PF00356 Bacterial regulatory proteins, lacI family BKM78_03525 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_03530 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_03535 PF01547 Bacterial extracellular solute-binding protein BKM78_03540 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BKM78_03545 PF04616 Glycosyl hydrolases family 43 BKM78_03550 PF04616 Glycosyl hydrolases family 43 BKM78_03550 PF16369 C-terminal lipocalin-like domain BKM78_03555 PF00356 Bacterial regulatory proteins, lacI family BKM78_03560 PF11762 L-arabinose isomerase C-terminal domain BKM78_03560 PF02610 L-arabinose isomerase BKM78_03585 PF01565 FAD binding domain BKM78_03585 PF02913 FAD linked oxidases, C-terminal domain BKM78_03605 PF00005 ABC transporter BKM78_03605 PF12848 ABC transporter BKM78_03610 PF01926 50S ribosome-binding GTPase BKM78_03635 PF00929 Exonuclease BKM78_03670 PF01451 Low molecular weight phosphotyrosine protein phosphatase BKM78_03675 PF03816 Cell envelope-related transcriptional attenuator domain BKM78_03685 PF00578 AhpC/TSA family BKM78_03690 PF01205 Uncharacterized protein family UPF0029 BKM78_03690 PF09186 Domain of unknown function (DUF1949) BKM78_03695 PF08460 Bacterial SH3 domain BKM78_03695 PF01551 Peptidase family M23 BKM78_03710 PF10011 Predicted membrane protein (DUF2254) BKM78_03720 PF11799 impB/mucB/samB family C-terminal domain BKM78_03720 PF00817 impB/mucB/samB family BKM78_03725 PF00186 Dihydrofolate reductase BKM78_03735 PF00303 Thymidylate synthase BKM78_03740 PF01725 Ham1 family BKM78_03745 PF03725 3' exoribonuclease family, domain 2 BKM78_03745 PF01138 3' exoribonuclease family, domain 1 BKM78_03750 PF01177 Asp/Glu/Hydantoin racemase BKM78_03760 PF02617 ATP-dependent Clp protease adaptor protein ClpS BKM78_03765 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BKM78_03765 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BKM78_03775 PF02446 4-alpha-glucanotransferase BKM78_03780 PF06271 RDD family BKM78_03785 PF07690 Major Facilitator Superfamily BKM78_03795 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BKM78_03795 PF05221 S-adenosyl-L-homocysteine hydrolase BKM78_03800 PF01220 Dehydroquinase class II BKM78_03810 PF03966 Trm112p-like protein BKM78_03815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BKM78_03815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BKM78_03815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BKM78_03815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BKM78_03840 PF02467 Transcription factor WhiB BKM78_03845 PF00483 Nucleotidyl transferase BKM78_03845 PF01050 Mannose-6-phosphate isomerase BKM78_03870 PF03816 Cell envelope-related transcriptional attenuator domain BKM78_03875 PF03816 Cell envelope-related transcriptional attenuator domain BKM78_03880 PF00731 AIR carboxylase BKM78_03885 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BKM78_03885 PF02222 ATP-grasp domain BKM78_03895 PF02237 Biotin protein ligase C terminal domain BKM78_03895 PF08279 HTH domain BKM78_03895 PF03099 Biotin/lipoate A/B protein ligase family BKM78_03900 PF01039 Carboxyl transferase domain BKM78_03910 PF02545 Maf-like protein BKM78_03925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BKM78_03925 PF00364 Biotin-requiring enzyme BKM78_03925 PF00289 Biotin carboxylase, N-terminal domain BKM78_03925 PF02785 Biotin carboxylase C-terminal domain BKM78_03935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BKM78_03935 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKM78_03940 PF01048 Phosphorylase superfamily BKM78_03945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BKM78_03945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BKM78_03945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BKM78_03945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BKM78_03960 PF09334 tRNA synthetases class I (M) BKM78_03960 PF08264 Anticodon-binding domain of tRNA BKM78_03965 PF00075 RNase H BKM78_03975 PF00072 Response regulator receiver domain BKM78_03975 PF00196 Bacterial regulatory proteins, luxR family BKM78_03995 PF00962 Adenosine/AMP deaminase BKM78_04000 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BKM78_04020 PF02608 ABC transporter substrate-binding protein PnrA-like BKM78_04030 PF01595 Cyclin M transmembrane N-terminal domain BKM78_04030 PF00571 CBS domain BKM78_04030 PF03471 Transporter associated domain BKM78_04035 PF00551 Formyl transferase BKM78_04045 PF00474 Sodium:solute symporter family BKM78_04050 PF00056 lactate/malate dehydrogenase, NAD binding domain BKM78_04050 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BKM78_04065 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BKM78_04065 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BKM78_04070 PF02142 MGS-like domain BKM78_04070 PF01808 AICARFT/IMPCHase bienzyme BKM78_04075 PF00551 Formyl transferase BKM78_04090 PF00549 CoA-ligase BKM78_04090 PF02629 CoA binding domain BKM78_04095 PF08442 ATP-grasp domain BKM78_04095 PF00549 CoA-ligase BKM78_04105 PF13361 UvrD-like helicase C-terminal domain BKM78_04105 PF00580 UvrD/REP helicase N-terminal domain BKM78_04110 PF13091 PLD-like domain BKM78_04110 PF13396 Phospholipase_D-nuclease N-terminal BKM78_04120 PF04226 Transglycosylase associated protein BKM78_04125 PF00196 Bacterial regulatory proteins, luxR family BKM78_04125 PF00072 Response regulator receiver domain BKM78_04150 PF00117 Glutamine amidotransferase class-I BKM78_04150 PF00958 GMP synthase C terminal domain BKM78_04150 PF02540 NAD synthase BKM78_04155 PF00291 Pyridoxal-phosphate dependent enzyme BKM78_04160 PF01370 NAD dependent epimerase/dehydratase family BKM78_04165 PF01593 Flavin containing amine oxidoreductase BKM78_04170 PF01817 Chorismate mutase type II BKM78_04170 PF02153 Prephenate dehydrogenase BKM78_04175 PF00478 IMP dehydrogenase / GMP reductase domain BKM78_04180 PF00571 CBS domain BKM78_04180 PF00478 IMP dehydrogenase / GMP reductase domain BKM78_04185 PF00118 TCP-1/cpn60 chaperonin family BKM78_04190 PF00166 Chaperonin 10 Kd subunit BKM78_04195 PF14602 Hexapeptide repeat of succinyl-transferase BKM78_04195 PF12464 Maltose acetyltransferase BKM78_04200 PF18096 THUMP domain-like BKM78_04210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKM78_04210 PF00005 ABC transporter BKM78_04215 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_04215 PF12911 N-terminal TM domain of oligopeptide transport permease C BKM78_04220 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_04225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKM78_04230 PF00814 Glycoprotease family BKM78_04240 PF00814 Glycoprotease family BKM78_04245 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BKM78_04250 PF00270 DEAD/DEAH box helicase BKM78_04250 PF00271 Helicase conserved C-terminal domain BKM78_04255 PF13439 Glycosyltransferase Family 4 BKM78_04255 PF00534 Glycosyl transferases group 1 BKM78_04260 PF16338 Domain of unknown function (DUF4968) BKM78_04260 PF17137 Domain of unknown function (DUF5110) BKM78_04260 PF13802 Galactose mutarotase-like BKM78_04260 PF01055 Glycosyl hydrolases family 31 BKM78_04270 PF04261 Dyp-type peroxidase family BKM78_04275 PF01256 Carbohydrate kinase BKM78_04275 PF03853 YjeF-related protein N-terminus BKM78_04280 PF01648 4'-phosphopantetheinyl transferase superfamily BKM78_04285 PF01380 SIS domain BKM78_04290 PF00485 Phosphoribulokinase / Uridine kinase family BKM78_04295 PF05195 Aminopeptidase P, N-terminal domain BKM78_04295 PF00557 Metallopeptidase family M24 BKM78_04315 PF03328 HpcH/HpaI aldolase/citrate lyase family BKM78_04320 PF00571 CBS domain BKM78_04320 PF03448 MgtE intracellular N domain BKM78_04320 PF01769 Divalent cation transporter BKM78_04335 PF01883 Iron-sulfur cluster assembly protein BKM78_04335 PF10609 NUBPL iron-transfer P-loop NTPase BKM78_04340 PF02416 mttA/Hcf106 family BKM78_04350 PF08281 Sigma-70, region 4 BKM78_04350 PF04542 Sigma-70 region 2 BKM78_04355 PF00701 Dihydrodipicolinate synthetase family BKM78_04360 PF01596 O-methyltransferase BKM78_04365 PF00483 Nucleotidyl transferase BKM78_04370 PF00534 Glycosyl transferases group 1 BKM78_04370 PF13439 Glycosyltransferase Family 4 BKM78_04385 PF03641 Possible lysine decarboxylase BKM78_04390 PF01546 Peptidase family M20/M25/M40 BKM78_04390 PF07687 Peptidase dimerisation domain BKM78_04395 PF08379 Bacterial transglutaminase-like N-terminal region BKM78_04395 PF01841 Transglutaminase-like superfamily BKM78_04405 PF04174 A circularly permuted ATPgrasp BKM78_04410 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle BKM78_04410 PF14602 Hexapeptide repeat of succinyl-transferase BKM78_04420 PF00005 ABC transporter BKM78_04420 PF00664 ABC transporter transmembrane region BKM78_04425 PF00664 ABC transporter transmembrane region BKM78_04425 PF00005 ABC transporter BKM78_04435 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_04440 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_04450 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BKM78_04455 PF00356 Bacterial regulatory proteins, lacI family BKM78_04460 PF00155 Aminotransferase class I and II BKM78_04465 PF00037 4Fe-4S binding domain BKM78_04475 PF01343 Peptidase family S49 BKM78_04480 PF02780 Transketolase, C-terminal domain BKM78_04480 PF00456 Transketolase, thiamine diphosphate binding domain BKM78_04480 PF02779 Transketolase, pyrimidine binding domain BKM78_04485 PF00156 Phosphoribosyl transferase domain BKM78_04505 PF00857 Isochorismatase family BKM78_04515 PF00132 Bacterial transferase hexapeptide (six repeats) BKM78_04515 PF06426 Serine acetyltransferase, N-terminal BKM78_04555 PF06071 Protein of unknown function (DUF933) BKM78_04555 PF01926 50S ribosome-binding GTPase BKM78_04565 PF02127 Aminopeptidase I zinc metalloprotease (M18) BKM78_04570 PF02646 RmuC family BKM78_04580 PF00585 C-terminal regulatory domain of Threonine dehydratase BKM78_04580 PF00291 Pyridoxal-phosphate dependent enzyme BKM78_04585 PF02401 LytB protein BKM78_04595 PF02601 Exonuclease VII, large subunit BKM78_04595 PF13742 OB-fold nucleic acid binding domain BKM78_04600 PF02609 Exonuclease VII small subunit BKM78_04610 PF01255 Putative undecaprenyl diphosphate synthase BKM78_04615 PF03006 Haemolysin-III related BKM78_04620 PF02562 PhoH-like protein BKM78_04620 PF13638 PIN domain BKM78_04640 PF03190 Protein of unknown function, DUF255 BKM78_04645 PF01694 Rhomboid family BKM78_04655 PF03449 Transcription elongation factor, N-terminal BKM78_04655 PF01272 Transcription elongation factor, GreA/GreB, C-term BKM78_04670 PF03167 Uracil DNA glycosylase superfamily BKM78_04675 PF01625 Peptide methionine sulfoxide reductase BKM78_04685 PF04228 Putative neutral zinc metallopeptidase BKM78_04690 PF00293 NUDIX domain BKM78_04725 PF01145 SPFH domain / Band 7 family BKM78_04725 PF15975 Flotillin BKM78_04730 PF02541 Ppx/GppA phosphatase family BKM78_04745 PF00113 Enolase, C-terminal TIM barrel domain BKM78_04745 PF03952 Enolase, N-terminal domain BKM78_04750 PF03819 MazG nucleotide pyrophosphohydrolase domain BKM78_04760 PF17757 UvrB interaction domain BKM78_04760 PF02559 CarD-like/TRCF domain BKM78_04760 PF00270 DEAD/DEAH box helicase BKM78_04760 PF03461 TRCF domain BKM78_04760 PF00271 Helicase conserved C-terminal domain BKM78_04765 PF01195 Peptidyl-tRNA hydrolase BKM78_04770 PF14693 Ribosomal protein TL5, C-terminal domain BKM78_04770 PF01386 Ribosomal L25p family BKM78_04775 PF00356 Bacterial regulatory proteins, lacI family BKM78_04800 PF00356 Bacterial regulatory proteins, lacI family BKM78_04835 PF00005 ABC transporter BKM78_04840 PF01566 Natural resistance-associated macrophage protein BKM78_04840 PF03358 NADPH-dependent FMN reductase BKM78_04845 PF14572 Phosphoribosyl synthetase-associated domain BKM78_04845 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BKM78_04850 PF00132 Bacterial transferase hexapeptide (six repeats) BKM78_04850 PF12804 MobA-like NTP transferase domain BKM78_04860 PF00356 Bacterial regulatory proteins, lacI family BKM78_04870 PF01569 PAP2 superfamily BKM78_04875 PF00356 Bacterial regulatory proteins, lacI family BKM78_04880 PF00722 Glycosyl hydrolases family 16 BKM78_04890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKM78_04910 PF03352 Methyladenine glycosylase BKM78_04930 PF08544 GHMP kinases C terminal BKM78_04930 PF00288 GHMP kinases N terminal domain BKM78_04935 PF00398 Ribosomal RNA adenine dimethylase BKM78_04940 PF01026 TatD related DNase BKM78_04945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKM78_04950 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase BKM78_04950 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BKM78_04960 PF00860 Permease family BKM78_04970 PF06965 Na+/H+ antiporter 1 BKM78_04985 PF02674 Colicin V production protein BKM78_04990 PF09244 Domain of unknown function (DUF1964) BKM78_04990 PF00128 Alpha amylase, catalytic domain BKM78_05005 PF03453 MoeA N-terminal region (domain I and II) BKM78_05005 PF03454 MoeA C-terminal region (domain IV) BKM78_05005 PF00994 Probable molybdopterin binding domain BKM78_05025 PF01741 Large-conductance mechanosensitive channel, MscL BKM78_05075 PF04324 BFD-like [2Fe-2S] binding domain BKM78_05075 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BKM78_05075 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKM78_05075 PF18267 Rubredoxin NAD+ reductase C-terminal domain BKM78_05075 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BKM78_05080 PF18267 Rubredoxin NAD+ reductase C-terminal domain BKM78_05080 PF04324 BFD-like [2Fe-2S] binding domain BKM78_05080 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BKM78_05080 PF13806 Rieske-like [2Fe-2S] domain BKM78_05080 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKM78_05080 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BKM78_05085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BKM78_05085 PF00384 Molybdopterin oxidoreductase BKM78_05085 PF01568 Molydopterin dinucleotide binding domain BKM78_05090 PF07690 Major Facilitator Superfamily BKM78_05110 PF01180 Dihydroorotate dehydrogenase BKM78_05115 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BKM78_05115 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BKM78_05115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKM78_05115 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BKM78_05115 PF10371 Domain of unknown function BKM78_05120 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BKM78_05120 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKM78_05140 PF00085 Thioredoxin BKM78_05145 PF01209 ubiE/COQ5 methyltransferase family BKM78_05150 PF02742 Iron dependent repressor, metal binding and dimerisation domain BKM78_05150 PF18357 Diphteria toxin repressor SH3 domain BKM78_05150 PF01325 Iron dependent repressor, N-terminal DNA binding domain BKM78_05155 PF01979 Amidohydrolase family BKM78_05160 PF00266 Aminotransferase class-V BKM78_05175 PF00289 Biotin carboxylase, N-terminal domain BKM78_05175 PF00364 Biotin-requiring enzyme BKM78_05175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BKM78_05175 PF00682 HMGL-like BKM78_05175 PF02436 Conserved carboxylase domain BKM78_05175 PF02785 Biotin carboxylase C-terminal domain BKM78_05180 PF00860 Permease family BKM78_05185 PF11228 Protein of unknown function (DUF3027) BKM78_05190 PF00313 'Cold-shock' DNA-binding domain BKM78_05195 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BKM78_05205 PF00293 NUDIX domain BKM78_05220 PF00118 TCP-1/cpn60 chaperonin family BKM78_05235 PF01238 Phosphomannose isomerase type I BKM78_05255 PF00005 ABC transporter BKM78_05255 PF08402 TOBE domain BKM78_05260 PF01053 Cys/Met metabolism PLP-dependent enzyme BKM78_05270 PF01209 ubiE/COQ5 methyltransferase family BKM78_05275 PF01406 tRNA synthetases class I (C) catalytic domain BKM78_05275 PF09190 DALR domain BKM78_05280 PF00588 SpoU rRNA Methylase family BKM78_05280 PF08032 RNA 2'-O ribose methyltransferase substrate binding BKM78_05285 PF00464 Serine hydroxymethyltransferase BKM78_05290 PF02542 YgbB family BKM78_05295 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BKM78_05300 PF02559 CarD-like/TRCF domain BKM78_05310 PF00072 Response regulator receiver domain BKM78_05310 PF00486 Transcriptional regulatory protein, C terminal BKM78_05315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKM78_05315 PF00512 His Kinase A (phospho-acceptor) domain BKM78_05320 PF01895 PhoU domain BKM78_05325 PF00300 Histidine phosphatase superfamily (branch 1) BKM78_05330 PF01594 AI-2E family transporter BKM78_05335 PF00106 short chain dehydrogenase BKM78_05340 PF00465 Iron-containing alcohol dehydrogenase BKM78_05350 PF00364 Biotin-requiring enzyme BKM78_05360 PF01039 Carboxyl transferase domain BKM78_05365 PF02436 Conserved carboxylase domain BKM78_05365 PF00682 HMGL-like BKM78_05380 PF00535 Glycosyl transferase family 2 BKM78_05390 PF00072 Response regulator receiver domain BKM78_05390 PF04397 LytTr DNA-binding domain BKM78_05395 PF03275 UDP-galactopyranose mutase BKM78_05400 PF14310 Fibronectin type III-like domain BKM78_05400 PF01915 Glycosyl hydrolase family 3 C-terminal domain BKM78_05400 PF00933 Glycosyl hydrolase family 3 N terminal domain BKM78_05410 PF00933 Glycosyl hydrolase family 3 N terminal domain BKM78_05415 PF00571 CBS domain BKM78_05430 PF00106 short chain dehydrogenase BKM78_05440 PF02779 Transketolase, pyrimidine binding domain BKM78_05440 PF02780 Transketolase, C-terminal domain BKM78_05445 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKM78_05445 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BKM78_05450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BKM78_05450 PF00364 Biotin-requiring enzyme BKM78_05450 PF02817 e3 binding domain BKM78_05455 PF08220 DeoR-like helix-turn-helix domain BKM78_05455 PF00455 DeoR C terminal sensor domain BKM78_05465 PF01202 Shikimate kinase BKM78_05470 PF00356 Bacterial regulatory proteins, lacI family BKM78_05470 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BKM78_05475 PF00005 ABC transporter BKM78_05480 PF02653 Branched-chain amino acid transport system / permease component BKM78_05505 PF00485 Phosphoribulokinase / Uridine kinase family BKM78_05510 PF01232 Mannitol dehydrogenase Rossmann domain BKM78_05510 PF08125 Mannitol dehydrogenase C-terminal domain BKM78_05540 PF00923 Transaldolase/Fructose-6-phosphate aldolase BKM78_05545 PF16123 Hydroxyacylglutathione hydrolase C-terminus BKM78_05545 PF00753 Metallo-beta-lactamase superfamily BKM78_05550 PF00581 Rhodanese-like domain BKM78_05555 PF01925 Sulfite exporter TauE/SafE BKM78_05560 PF01022 Bacterial regulatory protein, arsR family BKM78_05575 PF03099 Biotin/lipoate A/B protein ligase family BKM78_05575 PF10437 Bacterial lipoate protein ligase C-terminus BKM78_05585 PF00356 Bacterial regulatory proteins, lacI family BKM78_05590 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BKM78_05590 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BKM78_05595 PF07882 L-fucose isomerase, second N-terminal domain BKM78_05595 PF07881 L-fucose isomerase, first N-terminal domain BKM78_05595 PF02952 L-fucose isomerase, C-terminal domain BKM78_05605 PF02653 Branched-chain amino acid transport system / permease component BKM78_05610 PF00005 ABC transporter BKM78_05620 PF01116 Fructose-bisphosphate aldolase class-II BKM78_05645 PF04264 YceI-like domain BKM78_05650 PF04011 LemA family BKM78_05655 PF08671 Anti-repressor SinI BKM78_05655 PF01381 Helix-turn-helix BKM78_05660 PF00463 Isocitrate lyase family BKM78_05665 PF01274 Malate synthase BKM78_05670 PF00156 Phosphoribosyl transferase domain BKM78_05680 PF02277 Phosphoribosyltransferase BKM78_05685 PF02571 Precorrin-6x reductase CbiJ/CobK BKM78_05690 PF07685 CobB/CobQ-like glutamine amidotransferase domain BKM78_05690 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BKM78_05695 PF12557 Cob(I)alamin adenosyltransferase N terminal BKM78_05695 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BKM78_05700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKM78_05705 PF00005 ABC transporter BKM78_05720 PF01891 Cobalt uptake substrate-specific transmembrane region BKM78_05725 PF02570 Precorrin-8X methylmutase BKM78_05730 PF00561 alpha/beta hydrolase fold BKM78_05740 PF00196 Bacterial regulatory proteins, luxR family BKM78_05740 PF00072 Response regulator receiver domain BKM78_05745 PF01888 CbiD BKM78_05755 PF00202 Aminotransferase class-III BKM78_05760 PF10414 Sirohaem synthase dimerisation region BKM78_05760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKM78_05760 PF14824 Sirohaem biosynthesis protein central BKM78_05765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKM78_05770 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKM78_05775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKM78_05780 PF00270 DEAD/DEAH box helicase BKM78_05780 PF00570 HRDC domain BKM78_05780 PF09382 RQC domain BKM78_05780 PF16124 RecQ zinc-binding BKM78_05780 PF00271 Helicase conserved C-terminal domain BKM78_05785 PF07685 CobB/CobQ-like glutamine amidotransferase domain BKM78_05785 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BKM78_05795 PF02627 Carboxymuconolactone decarboxylase family BKM78_05800 PF00248 Aldo/keto reductase family BKM78_05810 PF00933 Glycosyl hydrolase family 3 N terminal domain BKM78_05810 PF01915 Glycosyl hydrolase family 3 C-terminal domain BKM78_05810 PF14310 Fibronectin type III-like domain BKM78_05815 PF01595 Cyclin M transmembrane N-terminal domain BKM78_05815 PF00571 CBS domain BKM78_05820 PF00571 CBS domain BKM78_05820 PF01595 Cyclin M transmembrane N-terminal domain BKM78_05820 PF03471 Transporter associated domain BKM78_05830 PF01022 Bacterial regulatory protein, arsR family BKM78_05850 PF00356 Bacterial regulatory proteins, lacI family BKM78_05865 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BKM78_05865 PF02837 Glycosyl hydrolases family 2, sugar binding domain BKM78_05865 PF16355 Domain of unknown function (DUF4982) BKM78_05865 PF00703 Glycosyl hydrolases family 2 BKM78_05865 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BKM78_05870 PF00356 Bacterial regulatory proteins, lacI family BKM78_05880 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_05915 PF07726 ATPase family associated with various cellular activities (AAA) BKM78_05915 PF17863 AAA lid domain BKM78_05935 PF00175 Oxidoreductase NAD-binding domain BKM78_05935 PF00111 2Fe-2S iron-sulfur cluster binding domain BKM78_05935 PF00970 Oxidoreductase FAD-binding domain BKM78_05950 PF00300 Histidine phosphatase superfamily (branch 1) BKM78_05965 PF13823 Alcohol dehydrogenase GroES-associated BKM78_05965 PF08240 Alcohol dehydrogenase GroES-like domain BKM78_05965 PF00107 Zinc-binding dehydrogenase BKM78_05970 PF07995 Glucose / Sorbosone dehydrogenase BKM78_05975 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BKM78_05975 PF01243 Pyridoxamine 5'-phosphate oxidase BKM78_05990 PF02861 Clp amino terminal domain, pathogenicity island component BKM78_05990 PF07724 AAA domain (Cdc48 subfamily) BKM78_05990 PF10431 C-terminal, D2-small domain, of ClpB protein BKM78_05990 PF00004 ATPase family associated with various cellular activities (AAA) BKM78_05990 PF17871 AAA lid domain BKM78_05995 PF00128 Alpha amylase, catalytic domain BKM78_05995 PF11941 Domain of unknown function (DUF3459) BKM78_06000 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BKM78_06000 PF00056 lactate/malate dehydrogenase, NAD binding domain BKM78_06020 PF00107 Zinc-binding dehydrogenase BKM78_06020 PF08240 Alcohol dehydrogenase GroES-like domain BKM78_06025 PF00155 Aminotransferase class I and II BKM78_06035 PF02110 Hydroxyethylthiazole kinase family BKM78_06040 PF03070 TENA/THI-4/PQQC family BKM78_06040 PF08543 Phosphomethylpyrimidine kinase BKM78_06040 PF02581 Thiamine monophosphate synthase BKM78_06045 PF08543 Phosphomethylpyrimidine kinase BKM78_06050 PF02581 Thiamine monophosphate synthase BKM78_06050 PF03070 TENA/THI-4/PQQC family BKM78_06050 PF08543 Phosphomethylpyrimidine kinase BKM78_06055 PF00343 Carbohydrate phosphorylase BKM78_06060 PF00005 ABC transporter BKM78_06065 PF01032 FecCD transport family BKM78_06070 PF01032 FecCD transport family BKM78_06090 PF13411 MerR HTH family regulatory protein BKM78_06095 PF00684 DnaJ central domain BKM78_06095 PF01556 DnaJ C terminal domain BKM78_06095 PF00226 DnaJ domain BKM78_06100 PF01025 GrpE BKM78_06105 PF00012 Hsp70 protein BKM78_06115 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BKM78_06115 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BKM78_06130 PF00291 Pyridoxal-phosphate dependent enzyme BKM78_06130 PF14821 Threonine synthase N terminus BKM78_06140 PF00005 ABC transporter BKM78_06155 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKM78_06160 PF07681 DoxX BKM78_06165 PF00486 Transcriptional regulatory protein, C terminal BKM78_06165 PF00072 Response regulator receiver domain BKM78_06170 PF00512 His Kinase A (phospho-acceptor) domain BKM78_06170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKM78_06170 PF00672 HAMP domain BKM78_06175 PF01791 DeoC/LacD family aldolase BKM78_06180 PF00664 ABC transporter transmembrane region BKM78_06180 PF00005 ABC transporter BKM78_06185 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) BKM78_06195 PF00155 Aminotransferase class I and II BKM78_06200 PF08264 Anticodon-binding domain of tRNA BKM78_06200 PF00133 tRNA synthetases class I (I, L, M and V) BKM78_06205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKM78_06205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKM78_06210 PF04337 Protein of unknown function, DUF480 BKM78_06215 PF00696 Amino acid kinase family BKM78_06215 PF01842 ACT domain BKM78_06215 PF13840 ACT domain BKM78_06225 PF05872 Bacterial protein of unknown function (DUF853) BKM78_06250 PF14437 MafB19-like deaminase BKM78_06265 PF14256 YwiC-like protein BKM78_06270 PF00378 Enoyl-CoA hydratase/isomerase BKM78_06275 PF03009 Glycerophosphoryl diester phosphodiesterase family BKM78_06280 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BKM78_06280 PF10135 Rod binding protein BKM78_06295 PF02805 Metal binding domain of Ada BKM78_06295 PF12833 Helix-turn-helix domain BKM78_06295 PF06029 AlkA N-terminal domain BKM78_06295 PF00730 HhH-GPD superfamily base excision DNA repair protein BKM78_06300 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BKM78_06300 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BKM78_06310 PF03816 Cell envelope-related transcriptional attenuator domain BKM78_06330 PF00356 Bacterial regulatory proteins, lacI family BKM78_06335 PF13407 Periplasmic binding protein domain BKM78_06340 PF00005 ABC transporter BKM78_06345 PF02653 Branched-chain amino acid transport system / permease component BKM78_06350 PF02653 Branched-chain amino acid transport system / permease component BKM78_06375 PF00849 RNA pseudouridylate synthase BKM78_06375 PF01479 S4 domain BKM78_06390 PF08240 Alcohol dehydrogenase GroES-like domain BKM78_06390 PF00107 Zinc-binding dehydrogenase BKM78_06395 PF02350 UDP-N-acetylglucosamine 2-epimerase BKM78_06405 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BKM78_06405 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BKM78_06405 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BKM78_06410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKM78_06410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKM78_06415 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BKM78_06420 PF00132 Bacterial transferase hexapeptide (six repeats) BKM78_06430 PF14524 Wzt C-terminal domain BKM78_06430 PF00005 ABC transporter BKM78_06455 PF00534 Glycosyl transferases group 1 BKM78_06455 PF13579 Glycosyl transferase 4-like domain BKM78_06465 PF00764 Arginosuccinate synthase BKM78_06480 PF16657 Maltogenic Amylase, C-terminal domain BKM78_06480 PF00128 Alpha amylase, catalytic domain BKM78_06490 PF02403 Seryl-tRNA synthetase N-terminal domain BKM78_06490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BKM78_06495 PF07690 Major Facilitator Superfamily BKM78_06500 PF00781 Diacylglycerol kinase catalytic domain BKM78_06505 PF00800 Prephenate dehydratase BKM78_06505 PF01842 ACT domain BKM78_06515 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BKM78_06515 PF06827 Zinc finger found in FPG and IleRS BKM78_06530 PF01168 Alanine racemase, N-terminal domain BKM78_06530 PF00842 Alanine racemase, C-terminal domain BKM78_06535 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BKM78_06535 PF00364 Biotin-requiring enzyme BKM78_06535 PF02817 e3 binding domain BKM78_06540 PF02780 Transketolase, C-terminal domain BKM78_06540 PF02779 Transketolase, pyrimidine binding domain BKM78_06545 PF00676 Dehydrogenase E1 component BKM78_06550 PF02872 5'-nucleotidase, C-terminal domain BKM78_06550 PF00149 Calcineurin-like phosphoesterase BKM78_06550 PF17936 Bacterial Ig domain BKM78_06555 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BKM78_06555 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BKM78_06560 PF01451 Low molecular weight phosphotyrosine protein phosphatase BKM78_06565 PF00072 Response regulator receiver domain BKM78_06565 PF00486 Transcriptional regulatory protein, C terminal BKM78_06570 PF00672 HAMP domain BKM78_06570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKM78_06570 PF00512 His Kinase A (phospho-acceptor) domain BKM78_06595 PF00872 Transposase, Mutator family BKM78_06605 PF00589 Phage integrase family BKM78_06605 PF02899 Phage integrase, N-terminal SAM-like domain BKM78_06630 PF00005 ABC transporter BKM78_06645 PF00512 His Kinase A (phospho-acceptor) domain BKM78_06645 PF00672 HAMP domain BKM78_06645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKM78_06650 PF00486 Transcriptional regulatory protein, C terminal BKM78_06650 PF00072 Response regulator receiver domain BKM78_06660 PF00005 ABC transporter BKM78_06670 PF03793 PASTA domain BKM78_06670 PF00069 Protein kinase domain BKM78_06675 PF00248 Aldo/keto reductase family BKM78_06695 PF00501 AMP-binding enzyme BKM78_06695 PF13193 AMP-binding enzyme C-terminal domain BKM78_06705 PF07311 Dodecin BKM78_06715 PF12419 SNF2 Helicase protein BKM78_06715 PF00271 Helicase conserved C-terminal domain BKM78_06715 PF00176 SNF2 family N-terminal domain BKM78_06725 PF00534 Glycosyl transferases group 1 BKM78_06725 PF13439 Glycosyltransferase Family 4 BKM78_06755 PF00356 Bacterial regulatory proteins, lacI family BKM78_06765 PF13183 4Fe-4S dicluster domain BKM78_06765 PF01565 FAD binding domain BKM78_06765 PF02913 FAD linked oxidases, C-terminal domain BKM78_06770 PF04198 Putative sugar-binding domain BKM78_06775 PF07944 Beta-L-arabinofuranosidase, GH127 BKM78_06780 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BKM78_06780 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BKM78_06785 PF07005 Sugar-binding N-terminal domain BKM78_06785 PF17042 Nucleotide-binding C-terminal domain BKM78_06805 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_06810 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_06820 PF16353 Domain of unknown function(DUF4981) BKM78_06820 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BKM78_06820 PF02837 Glycosyl hydrolases family 2, sugar binding domain BKM78_06820 PF02929 Beta galactosidase small chain BKM78_06830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BKM78_06830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BKM78_06835 PF13407 Periplasmic binding protein domain BKM78_06840 PF02653 Branched-chain amino acid transport system / permease component BKM78_06855 PF02780 Transketolase, C-terminal domain BKM78_06855 PF02779 Transketolase, pyrimidine binding domain BKM78_06860 PF00456 Transketolase, thiamine diphosphate binding domain BKM78_06865 PF01261 Xylose isomerase-like TIM barrel BKM78_06870 PF00294 pfkB family carbohydrate kinase BKM78_06875 PF05025 RbsD / FucU transport protein family BKM78_06885 PF00486 Transcriptional regulatory protein, C terminal BKM78_06885 PF00072 Response regulator receiver domain BKM78_06890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKM78_06890 PF00672 HAMP domain BKM78_06890 PF18698 Histidine kinase sensor domain BKM78_06890 PF00989 PAS fold BKM78_06890 PF00512 His Kinase A (phospho-acceptor) domain BKM78_06910 PF02585 GlcNAc-PI de-N-acetylase BKM78_06925 PF01740 STAS domain BKM78_06925 PF00916 Sulfate permease family BKM78_06930 PF00072 Response regulator receiver domain BKM78_06930 PF00486 Transcriptional regulatory protein, C terminal BKM78_06935 PF00989 PAS fold BKM78_06935 PF11808 Phosphate regulon sensor protein PhoR BKM78_06935 PF00512 His Kinase A (phospho-acceptor) domain BKM78_06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKM78_06945 PF00356 Bacterial regulatory proteins, lacI family BKM78_06950 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BKM78_06955 PF09594 Glycosyltransferase family 87 BKM78_06960 PF08402 TOBE domain BKM78_06960 PF00005 ABC transporter BKM78_06965 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_06975 PF00668 Condensation domain BKM78_06975 PF00550 Phosphopantetheine attachment site BKM78_06975 PF13193 AMP-binding enzyme C-terminal domain BKM78_06975 PF00501 AMP-binding enzyme BKM78_06985 PF03033 Glycosyltransferase family 28 N-terminal domain BKM78_07000 PF17760 UvrA interaction domain BKM78_07000 PF00005 ABC transporter BKM78_07000 PF17755 UvrA DNA-binding domain BKM78_07005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKM78_07005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKM78_07025 PF01281 Ribosomal protein L9, N-terminal domain BKM78_07025 PF03948 Ribosomal protein L9, C-terminal domain BKM78_07030 PF01084 Ribosomal protein S18 BKM78_07035 PF00436 Single-strand binding protein family BKM78_07040 PF01250 Ribosomal protein S6 BKM78_07050 PF00581 Rhodanese-like domain BKM78_07055 PF00501 AMP-binding enzyme BKM78_07060 PF01261 Xylose isomerase-like TIM barrel BKM78_07065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKM78_07065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKM78_07070 PF00356 Bacterial regulatory proteins, lacI family BKM78_07075 PF01261 Xylose isomerase-like TIM barrel BKM78_07080 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BKM78_07080 PF13244 Domain of unknown function (DUF4040) BKM78_07080 PF00361 Proton-conducting membrane transporter BKM78_07080 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BKM78_07110 PF00296 Luciferase-like monooxygenase BKM78_07115 PF13860 FlgD Ig-like domain BKM78_07115 PF05922 Peptidase inhibitor I9 BKM78_07115 PF00082 Subtilase family BKM78_07115 PF02225 PA domain BKM78_07120 PF07085 DRTGG domain BKM78_07120 PF01515 Phosphate acetyl/butaryl transferase BKM78_07125 PF00871 Acetokinase family BKM78_07130 PF00106 short chain dehydrogenase BKM78_07145 PF03883 Peroxide stress protein YaaA BKM78_07150 PF00209 Sodium:neurotransmitter symporter family BKM78_07160 PF00391 PEP-utilising enzyme, mobile domain BKM78_07160 PF02896 PEP-utilising enzyme, TIM barrel domain BKM78_07160 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BKM78_07165 PF03618 Kinase/pyrophosphorylase BKM78_07170 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BKM78_07170 PF02378 Phosphotransferase system, EIIC BKM78_07170 PF00367 phosphotransferase system, EIIB BKM78_07175 PF00381 PTS HPr component phosphorylation site BKM78_07175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BKM78_07175 PF02896 PEP-utilising enzyme, TIM barrel domain BKM78_07175 PF05524 PEP-utilising enzyme, N-terminal BKM78_07175 PF00391 PEP-utilising enzyme, mobile domain BKM78_07185 PF03030 Inorganic H+ pyrophosphatase BKM78_07205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BKM78_07225 PF00912 Transglycosylase BKM78_07225 PF00905 Penicillin binding protein transpeptidase domain BKM78_07230 PF00924 Mechanosensitive ion channel BKM78_07235 PF12627 Probable RNA and SrmB- binding site of polymerase A BKM78_07235 PF01966 HD domain BKM78_07235 PF01743 Poly A polymerase head domain BKM78_07245 PF03023 Lipid II flippase MurJ BKM78_07250 PF01068 ATP dependent DNA ligase domain BKM78_07250 PF04679 ATP dependent DNA ligase C terminal region BKM78_07255 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BKM78_07255 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BKM78_07260 PF00230 Major intrinsic protein BKM78_07270 PF03176 MMPL family BKM78_07275 PF00440 Bacterial regulatory proteins, tetR family BKM78_07280 PF00753 Metallo-beta-lactamase superfamily BKM78_07285 PF16363 GDP-mannose 4,6 dehydratase BKM78_07290 PF07730 Histidine kinase BKM78_07290 PF05231 MASE1 BKM78_07290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKM78_07295 PF00072 Response regulator receiver domain BKM78_07295 PF00196 Bacterial regulatory proteins, luxR family BKM78_07305 PF03741 Integral membrane protein TerC family BKM78_07315 PF00893 Small Multidrug Resistance protein BKM78_07320 PF00893 Small Multidrug Resistance protein BKM78_07345 PF01323 DSBA-like thioredoxin domain BKM78_07350 PF00375 Sodium:dicarboxylate symporter family BKM78_07360 PF02146 Sir2 family BKM78_07365 PF05661 Protein of unknown function (DUF808) BKM78_07400 PF00211 Adenylate and Guanylate cyclase catalytic domain BKM78_07400 PF13191 AAA ATPase domain BKM78_07410 PF00355 Rieske [2Fe-2S] domain BKM78_07425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BKM78_07425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BKM78_07425 PF02770 Acyl-CoA dehydrogenase, middle domain BKM78_07480 PF02569 Pantoate-beta-alanine ligase BKM78_07485 PF02261 Aspartate decarboxylase BKM78_07490 PF02548 Ketopantoate hydroxymethyltransferase BKM78_07495 PF00665 Integrase core domain BKM78_07505 PF02837 Glycosyl hydrolases family 2, sugar binding domain BKM78_07505 PF16353 Domain of unknown function(DUF4981) BKM78_07505 PF00703 Glycosyl hydrolases family 2 BKM78_07505 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BKM78_07505 PF02929 Beta galactosidase small chain BKM78_07510 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_07515 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_07520 PF13416 Bacterial extracellular solute-binding protein BKM78_07525 PF00356 Bacterial regulatory proteins, lacI family BKM78_07555 PF01695 IstB-like ATP binding protein BKM78_07570 PF14310 Fibronectin type III-like domain BKM78_07570 PF00933 Glycosyl hydrolase family 3 N terminal domain BKM78_07570 PF01915 Glycosyl hydrolase family 3 C-terminal domain BKM78_07580 PF01613 Flavin reductase like domain BKM78_07580 PF00258 Flavodoxin BKM78_07595 PF06545 Protein of unknown function (DUF1116) BKM78_07600 PF02629 CoA binding domain BKM78_07600 PF00549 CoA-ligase BKM78_07610 PF12796 Ankyrin repeats (3 copies) BKM78_07615 PF00696 Amino acid kinase family BKM78_07620 PF00392 Bacterial regulatory proteins, gntR family BKM78_07620 PF07729 FCD domain BKM78_07630 PF01614 Bacterial transcriptional regulator BKM78_07630 PF09339 IclR helix-turn-helix domain BKM78_07635 PF00923 Transaldolase/Fructose-6-phosphate aldolase BKM78_07650 PF00665 Integrase core domain BKM78_07660 PF00248 Aldo/keto reductase family BKM78_07670 PF00520 Ion transport protein BKM78_07670 PF00027 Cyclic nucleotide-binding domain BKM78_07675 PF01548 Transposase BKM78_07675 PF02371 Transposase IS116/IS110/IS902 family BKM78_07695 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_07700 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_07710 PF00266 Aminotransferase class-V BKM78_07715 PF00392 Bacterial regulatory proteins, gntR family BKM78_07715 PF07729 FCD domain BKM78_07725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKM78_07725 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKM78_07730 PF01261 Xylose isomerase-like TIM barrel BKM78_07735 PF01261 Xylose isomerase-like TIM barrel BKM78_07740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKM78_07740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKM78_07745 PF02653 Branched-chain amino acid transport system / permease component BKM78_07750 PF00005 ABC transporter BKM78_07760 PF00480 ROK family BKM78_07765 PF00331 Glycosyl hydrolase family 10 BKM78_07765 PF06452 Carbohydrate family 9 binding domain-like BKM78_07765 PF02018 Carbohydrate binding domain BKM78_07765 PF00395 S-layer homology domain BKM78_07790 PF01734 Patatin-like phospholipase BKM78_07795 PF03747 ADP-ribosylglycohydrolase BKM78_07800 PF03631 Virulence factor BrkB BKM78_07835 PF07859 alpha/beta hydrolase fold BKM78_07845 PF00072 Response regulator receiver domain BKM78_07845 PF00196 Bacterial regulatory proteins, luxR family BKM78_07870 PF09084 NMT1/THI5 like BKM78_07875 PF00005 ABC transporter BKM78_07890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKM78_07890 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKM78_07895 PF00356 Bacterial regulatory proteins, lacI family BKM78_07910 PF13305 Tetracyclin repressor-like, C-terminal domain BKM78_07910 PF00440 Bacterial regulatory proteins, tetR family BKM78_07915 PF01699 Sodium/calcium exchanger protein BKM78_07925 PF00485 Phosphoribulokinase / Uridine kinase family BKM78_07930 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BKM78_07935 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BKM78_07935 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BKM78_07950 PF12089 Transmembrane domain of unknown function (DUF3566) BKM78_07955 PF00521 DNA gyrase/topoisomerase IV, subunit A BKM78_07955 PF03989 DNA gyrase C-terminal domain, beta-propeller BKM78_07960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKM78_07960 PF01751 Toprim domain BKM78_07960 PF00204 DNA gyrase B BKM78_07960 PF00986 DNA gyrase B subunit, carboxyl terminus BKM78_07970 PF01551 Peptidase family M23 BKM78_07980 PF05258 Dna[CI] antecedent, DciA BKM78_07985 PF02463 RecF/RecN/SMC N terminal domain BKM78_07990 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKM78_07990 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BKM78_07995 PF00712 DNA polymerase III beta subunit, N-terminal domain BKM78_07995 PF02767 DNA polymerase III beta subunit, central domain BKM78_07995 PF02768 DNA polymerase III beta subunit, C-terminal domain BKM78_08000 PF02687 FtsX-like permease family BKM78_08000 PF12704 MacB-like periplasmic core domain BKM78_08005 PF12704 MacB-like periplasmic core domain BKM78_08005 PF02687 FtsX-like permease family BKM78_08005 PF00005 ABC transporter BKM78_08010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BKM78_08010 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKM78_08015 PF02583 Metal-sensitive transcriptional repressor BKM78_08020 PF08299 Bacterial dnaA protein helix-turn-helix BKM78_08020 PF00308 Bacterial dnaA protein BKM78_08025 PF00468 Ribosomal protein L34 BKM78_08030 PF00825 Ribonuclease P BKM78_08035 PF01809 Putative membrane protein insertion efficiency factor BKM78_08040 PF02096 60Kd inner membrane protein BKM78_08050 PF02527 rRNA small subunit methyltransferase G BKM78_08055 PF13614 AAA domain BKM78_08060 PF17762 HTH domain found in ParB protein BKM78_08060 PF02195 ParB-like nuclease domain BKM78_08075 PF01820 D-ala D-ala ligase N-terminus BKM78_08075 PF07478 D-ala D-ala ligase C-terminus BKM78_08080 PF00155 Aminotransferase class I and II BKM78_08100 PF00378 Enoyl-CoA hydratase/isomerase BKM78_08110 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BKM78_08110 PF01266 FAD dependent oxidoreductase BKM78_08135 PF13614 AAA domain BKM78_08145 PF08751 TrwC relaxase BKM78_08145 PF18272 single-stranded DNA binding TraI N-terminal subdomain BKM78_08145 PF07057 DNA helicase TraI BKM78_08145 PF18340 DNA relaxase TraI 2B/2B-like domain BKM78_08170 PF02903 Alpha amylase, N-terminal ig-like domain BKM78_08170 PF00128 Alpha amylase, catalytic domain BKM78_08195 PF00072 Response regulator receiver domain BKM78_08195 PF00486 Transcriptional regulatory protein, C terminal BKM78_08220 PF07731 Multicopper oxidase BKM78_08220 PF07732 Multicopper oxidase BKM78_08250 PF00665 Integrase core domain BKM78_08255 PF12823 Domain of unknown function (DUF3817) BKM78_08255 PF03176 MMPL family BKM78_08285 PF00753 Metallo-beta-lactamase superfamily BKM78_08290 PF13407 Periplasmic binding protein domain BKM78_08295 PF00005 ABC transporter BKM78_08300 PF02653 Branched-chain amino acid transport system / permease component BKM78_08310 PF00069 Protein kinase domain BKM78_08310 PF03793 PASTA domain BKM78_08320 PF00356 Bacterial regulatory proteins, lacI family BKM78_08325 PF00005 ABC transporter BKM78_08330 PF02653 Branched-chain amino acid transport system / permease component BKM78_08335 PF02653 Branched-chain amino acid transport system / permease component BKM78_08340 PF13407 Periplasmic binding protein domain BKM78_08345 PF13183 4Fe-4S dicluster domain BKM78_08345 PF02754 Cysteine-rich domain BKM78_08350 PF00890 FAD binding domain BKM78_08355 PF01266 FAD dependent oxidoreductase BKM78_08355 PF04324 BFD-like [2Fe-2S] binding domain BKM78_08360 PF03741 Integral membrane protein TerC family BKM78_08380 PF00128 Alpha amylase, catalytic domain BKM78_08380 PF02806 Alpha amylase, C-terminal all-beta domain BKM78_08380 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BKM78_08425 PF13732 Domain of unknown function (DUF4162) BKM78_08425 PF00005 ABC transporter BKM78_08430 PF17933 Tetracyclin repressor-like, C-terminal domain BKM78_08430 PF00440 Bacterial regulatory proteins, tetR family BKM78_08435 PF00381 PTS HPr component phosphorylation site BKM78_08440 PF00294 pfkB family carbohydrate kinase BKM78_08445 PF00455 DeoR C terminal sensor domain BKM78_08445 PF08220 DeoR-like helix-turn-helix domain BKM78_08450 PF00391 PEP-utilising enzyme, mobile domain BKM78_08450 PF05524 PEP-utilising enzyme, N-terminal BKM78_08450 PF02896 PEP-utilising enzyme, TIM barrel domain BKM78_08455 PF00553 Cellulose binding domain BKM78_08455 PF01341 Glycosyl hydrolases family 6 BKM78_08470 PF00392 Bacterial regulatory proteins, gntR family BKM78_08470 PF07729 FCD domain BKM78_08480 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BKM78_08480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BKM78_08485 PF02447 GntP family permease BKM78_08520 PF00248 Aldo/keto reductase family BKM78_08525 PF13443 Cro/C1-type HTH DNA-binding domain BKM78_08540 PF02142 MGS-like domain BKM78_08545 PF01790 Prolipoprotein diacylglyceryl transferase BKM78_08550 PF00480 ROK family BKM78_08560 PF02146 Sir2 family BKM78_08565 PF00248 Aldo/keto reductase family BKM78_08575 PF07670 Nucleoside recognition BKM78_08575 PF07664 Ferrous iron transport protein B C terminus BKM78_08575 PF02421 Ferrous iron transport protein B BKM78_08590 PF01694 Rhomboid family BKM78_08625 PF00437 Type II/IV secretion system protein BKM78_08645 PF00107 Zinc-binding dehydrogenase BKM78_08645 PF08240 Alcohol dehydrogenase GroES-like domain BKM78_08655 PF14572 Phosphoribosyl synthetase-associated domain BKM78_08655 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BKM78_08675 PF00005 ABC transporter BKM78_08675 PF08402 TOBE domain BKM78_08680 PF13407 Periplasmic binding protein domain BKM78_08685 PF02653 Branched-chain amino acid transport system / permease component BKM78_08690 PF00005 ABC transporter BKM78_08695 PF13407 Periplasmic binding protein domain BKM78_08720 PF00285 Citrate synthase, C-terminal domain BKM78_08725 PF07944 Beta-L-arabinofuranosidase, GH127 BKM78_08730 PF00005 ABC transporter BKM78_08730 PF00664 ABC transporter transmembrane region BKM78_08735 PF13545 Crp-like helix-turn-helix domain BKM78_08735 PF00027 Cyclic nucleotide-binding domain BKM78_08740 PF00403 Heavy-metal-associated domain BKM78_08755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BKM78_08755 PF00289 Biotin carboxylase, N-terminal domain BKM78_08755 PF02785 Biotin carboxylase C-terminal domain BKM78_08760 PF13460 NAD(P)H-binding BKM78_08765 PF05681 Fumarate hydratase (Fumerase) BKM78_08765 PF05683 Fumarase C-terminus BKM78_08780 PF00005 ABC transporter BKM78_08785 PF00144 Beta-lactamase BKM78_08790 PF01063 Amino-transferase class IV BKM78_08800 PF00296 Luciferase-like monooxygenase BKM78_08805 PF03358 NADPH-dependent FMN reductase BKM78_08815 PF02585 GlcNAc-PI de-N-acetylase BKM78_08825 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKM78_08825 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKM78_08830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKM78_08830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKM78_08850 PF00128 Alpha amylase, catalytic domain BKM78_08850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BKM78_08855 PF00781 Diacylglycerol kinase catalytic domain BKM78_08870 PF02540 NAD synthase BKM78_08870 PF00795 Carbon-nitrogen hydrolase BKM78_08880 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BKM78_08880 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BKM78_08885 PF03330 Lytic transglycolase BKM78_08890 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_08895 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_08910 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BKM78_08910 PF04616 Glycosyl hydrolases family 43 BKM78_08920 PF00356 Bacterial regulatory proteins, lacI family BKM78_08925 PF13802 Galactose mutarotase-like BKM78_08925 PF01055 Glycosyl hydrolases family 31 BKM78_08930 PF00730 HhH-GPD superfamily base excision DNA repair protein BKM78_08930 PF00633 Helix-hairpin-helix motif BKM78_08935 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BKM78_08935 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BKM78_08935 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BKM78_08945 PF00534 Glycosyl transferases group 1 BKM78_08955 PF00005 ABC transporter BKM78_08965 PF00535 Glycosyl transferase family 2 BKM78_08990 PF02350 UDP-N-acetylglucosamine 2-epimerase BKM78_09000 PF00872 Transposase, Mutator family BKM78_09020 PF00311 Phosphoenolpyruvate carboxylase BKM78_09030 PF00772 DnaB-like helicase N terminal domain BKM78_09030 PF03796 DnaB-like helicase C terminal domain BKM78_09035 PF02583 Metal-sensitive transcriptional repressor BKM78_09040 PF00403 Heavy-metal-associated domain BKM78_09045 PF00403 Heavy-metal-associated domain BKM78_09050 PF00206 Lyase BKM78_09050 PF10415 Fumarase C C-terminus BKM78_09055 PF13439 Glycosyltransferase Family 4 BKM78_09055 PF00534 Glycosyl transferases group 1 BKM78_09060 PF02595 Glycerate kinase family BKM78_09065 PF00664 ABC transporter transmembrane region BKM78_09065 PF00005 ABC transporter BKM78_09075 PF02322 Cytochrome bd terminal oxidase subunit II BKM78_09080 PF01654 Cytochrome bd terminal oxidase subunit I BKM78_09085 PF03965 Penicillinase repressor BKM78_09090 PF03976 Polyphosphate kinase 2 (PPK2) BKM78_09095 PF03471 Transporter associated domain BKM78_09095 PF00999 Sodium/hydrogen exchanger family BKM78_09100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BKM78_09105 PF00480 ROK family BKM78_09110 PF01261 Xylose isomerase-like TIM barrel BKM78_09115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BKM78_09115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BKM78_09120 PF00664 ABC transporter transmembrane region BKM78_09120 PF00005 ABC transporter BKM78_09125 PF00005 ABC transporter BKM78_09125 PF00664 ABC transporter transmembrane region BKM78_09140 PF07883 Cupin domain BKM78_09160 PF00356 Bacterial regulatory proteins, lacI family BKM78_09170 PF02837 Glycosyl hydrolases family 2, sugar binding domain BKM78_09170 PF00703 Glycosyl hydrolases family 2 BKM78_09170 PF16353 Domain of unknown function(DUF4981) BKM78_09170 PF02929 Beta galactosidase small chain BKM78_09170 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BKM78_09190 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BKM78_09190 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BKM78_09195 PF00890 FAD binding domain BKM78_09195 PF02910 Fumarate reductase flavoprotein C-term BKM78_09200 PF02445 Quinolinate synthetase A protein BKM78_09215 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_09220 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_09235 PF00356 Bacterial regulatory proteins, lacI family BKM78_09240 PF00232 Glycosyl hydrolase family 1 BKM78_09245 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_09250 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_09260 PF01336 OB-fold nucleic acid binding domain BKM78_09260 PF00152 tRNA synthetases class II (D, K and N) BKM78_09265 PF13419 Haloacid dehalogenase-like hydrolase BKM78_09280 PF00117 Glutamine amidotransferase class-I BKM78_09285 PF03793 PASTA domain BKM78_09285 PF00069 Protein kinase domain BKM78_09290 PF00905 Penicillin binding protein transpeptidase domain BKM78_09295 PF01098 Cell cycle protein BKM78_09310 PF00498 FHA domain BKM78_09310 PF12401 Protein of unknown function (DUF2662) BKM78_09325 PF01757 Acyltransferase family BKM78_09330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BKM78_09335 PF00107 Zinc-binding dehydrogenase BKM78_09335 PF08240 Alcohol dehydrogenase GroES-like domain BKM78_09340 PF04198 Putative sugar-binding domain BKM78_09350 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BKM78_09360 PF02310 B12 binding domain BKM78_09360 PF01642 Methylmalonyl-CoA mutase BKM78_09365 PF01642 Methylmalonyl-CoA mutase BKM78_09370 PF00809 Pterin binding enzyme BKM78_09375 PF02806 Alpha amylase, C-terminal all-beta domain BKM78_09375 PF00128 Alpha amylase, catalytic domain BKM78_09375 PF00686 Starch binding domain BKM78_09385 PF00923 Transaldolase/Fructose-6-phosphate aldolase BKM78_09395 PF00294 pfkB family carbohydrate kinase BKM78_09400 PF04962 KduI/IolB family BKM78_09405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKM78_09405 PF00205 Thiamine pyrophosphate enzyme, central domain BKM78_09405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKM78_09410 PF00171 Aldehyde dehydrogenase family BKM78_09415 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKM78_09415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKM78_09420 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BKM78_09425 PF00107 Zinc-binding dehydrogenase BKM78_09425 PF08240 Alcohol dehydrogenase GroES-like domain BKM78_09435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKM78_09435 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKM78_09440 PF00300 Histidine phosphatase superfamily (branch 1) BKM78_09445 PF02653 Branched-chain amino acid transport system / permease component BKM78_09450 PF00005 ABC transporter BKM78_09455 PF13407 Periplasmic binding protein domain BKM78_09460 PF01261 Xylose isomerase-like TIM barrel BKM78_09465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKM78_09465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKM78_09470 PF01261 Xylose isomerase-like TIM barrel BKM78_09485 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_09490 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_09500 PF13439 Glycosyltransferase Family 4 BKM78_09500 PF00534 Glycosyl transferases group 1 BKM78_09505 PF07729 FCD domain BKM78_09505 PF00392 Bacterial regulatory proteins, gntR family BKM78_09515 PF02018 Carbohydrate binding domain BKM78_09515 PF00331 Glycosyl hydrolase family 10 BKM78_09515 PF00395 S-layer homology domain BKM78_09515 PF06452 Carbohydrate family 9 binding domain-like BKM78_09520 PF00933 Glycosyl hydrolase family 3 N terminal domain BKM78_09520 PF01915 Glycosyl hydrolase family 3 C-terminal domain BKM78_09520 PF14310 Fibronectin type III-like domain BKM78_09525 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_09530 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_09540 PF00356 Bacterial regulatory proteins, lacI family BKM78_09545 PF00248 Aldo/keto reductase family BKM78_09565 PF00589 Phage integrase family BKM78_09565 PF14659 Phage integrase, N-terminal SAM-like domain BKM78_09585 PF00271 Helicase conserved C-terminal domain BKM78_09610 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BKM78_09610 PF01872 RibD C-terminal domain BKM78_09615 PF00677 Lumazine binding domain BKM78_09620 PF00925 GTP cyclohydrolase II BKM78_09620 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BKM78_09625 PF00885 6,7-dimethyl-8-ribityllumazine synthase BKM78_09645 PF01225 Mur ligase family, catalytic domain BKM78_09645 PF08245 Mur ligase middle domain BKM78_09645 PF02875 Mur ligase family, glutamate ligase domain BKM78_09655 PF03741 Integral membrane protein TerC family BKM78_09670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BKM78_09670 PF02142 MGS-like domain BKM78_09670 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BKM78_09675 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BKM78_09675 PF00117 Glutamine amidotransferase class-I BKM78_09680 PF00484 Carbonic anhydrase BKM78_09690 PF00311 Phosphoenolpyruvate carboxylase BKM78_09695 PF00689 Cation transporting ATPase, C-terminus BKM78_09695 PF00690 Cation transporter/ATPase, N-terminus BKM78_09755 PF02371 Transposase IS116/IS110/IS902 family BKM78_09755 PF01548 Transposase BKM78_09800 PF00005 ABC transporter BKM78_09830 PF01965 DJ-1/PfpI family BKM78_09855 PF00144 Beta-lactamase BKM78_09880 PF00255 Glutathione peroxidase BKM78_09890 PF00356 Bacterial regulatory proteins, lacI family BKM78_09895 PF16875 Glycosyl hydrolase family 36 N-terminal domain BKM78_09895 PF16874 Glycosyl hydrolase family 36 C-terminal domain BKM78_09900 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_09905 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_09910 PF13416 Bacterial extracellular solute-binding protein BKM78_09945 PF07729 FCD domain BKM78_09945 PF00392 Bacterial regulatory proteins, gntR family BKM78_09950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BKM78_09955 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_09960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKM78_09960 PF00005 ABC transporter BKM78_09965 PF00005 ABC transporter BKM78_09965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKM78_09970 PF00701 Dihydrodipicolinate synthetase family BKM78_09975 PF00480 ROK family BKM78_09980 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase BKM78_09985 PF07745 Glycosyl hydrolase family 53 BKM78_09990 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_09995 PF14785 Maltose transport system permease protein MalF P2 domain BKM78_09995 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_10005 PF02449 Beta-galactosidase BKM78_10005 PF08533 Beta-galactosidase C-terminal domain BKM78_10005 PF08532 Beta-galactosidase trimerisation domain BKM78_10010 PF00356 Bacterial regulatory proteins, lacI family BKM78_10030 PF08244 Glycosyl hydrolases family 32 C terminal BKM78_10030 PF00251 Glycosyl hydrolases family 32 N-terminal domain BKM78_10040 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_10045 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_10050 PF00356 Bacterial regulatory proteins, lacI family BKM78_10070 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain BKM78_10070 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain BKM78_10075 PF03176 MMPL family BKM78_10085 PF03372 Endonuclease/Exonuclease/phosphatase family BKM78_10095 PF00069 Protein kinase domain BKM78_10105 PF00356 Bacterial regulatory proteins, lacI family BKM78_10115 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_10120 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_10130 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BKM78_10130 PF04616 Glycosyl hydrolases family 43 BKM78_10135 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKM78_10135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKM78_10145 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKM78_10145 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKM78_10150 PF07690 Major Facilitator Superfamily BKM78_10170 PF00085 Thioredoxin BKM78_10185 PF03816 Cell envelope-related transcriptional attenuator domain BKM78_10195 PF07690 Major Facilitator Superfamily BKM78_10220 PF00342 Phosphoglucose isomerase BKM78_10225 PF00596 Class II Aldolase and Adducin N-terminal domain BKM78_10230 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BKM78_10230 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BKM78_10230 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BKM78_10255 PF05746 DALR anticodon binding domain BKM78_10255 PF00750 tRNA synthetases class I (R) BKM78_10255 PF03485 Arginyl tRNA synthetase N terminal domain BKM78_10280 PF00365 Phosphofructokinase BKM78_10285 PF01565 FAD binding domain BKM78_10285 PF02913 FAD linked oxidases, C-terminal domain BKM78_10305 PF00483 Nucleotidyl transferase BKM78_10315 PF13419 Haloacid dehalogenase-like hydrolase BKM78_10320 PF03180 NLPA lipoprotein BKM78_10325 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_10330 PF00005 ABC transporter BKM78_10330 PF09383 NIL domain BKM78_10350 PF01068 ATP dependent DNA ligase domain BKM78_10350 PF04679 ATP dependent DNA ligase C terminal region BKM78_10355 PF01546 Peptidase family M20/M25/M40 BKM78_10355 PF07687 Peptidase dimerisation domain BKM78_10360 PF01914 MarC family integral membrane protein BKM78_10365 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BKM78_10365 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BKM78_10370 PF00300 Histidine phosphatase superfamily (branch 1) BKM78_10385 PF05175 Methyltransferase small domain BKM78_10390 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKM78_10390 PF14824 Sirohaem biosynthesis protein central BKM78_10390 PF10414 Sirohaem synthase dimerisation region BKM78_10395 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BKM78_10400 PF02654 Cobalamin-5-phosphate synthase BKM78_10415 PF01235 Sodium:alanine symporter family BKM78_10435 PF13726 Na+-H+ antiporter family BKM78_10435 PF03553 Na+/H+ antiporter family BKM78_10450 PF12169 DNA polymerase III subunits gamma and tau domain III BKM78_10455 PF02575 YbaB/EbfC DNA-binding family BKM78_10460 PF02132 RecR protein BKM78_10460 PF13662 Toprim domain BKM78_10470 PF00392 Bacterial regulatory proteins, gntR family BKM78_10475 PF01680 SOR/SNZ family BKM78_10480 PF01174 SNO glutamine amidotransferase family BKM78_10490 PF00005 ABC transporter BKM78_10495 PF01061 ABC-2 type transporter BKM78_10505 PF00916 Sulfate permease family BKM78_10505 PF01740 STAS domain BKM78_10510 PF03949 Malic enzyme, NAD binding domain BKM78_10510 PF00390 Malic enzyme, N-terminal domain BKM78_10515 PF13344 Haloacid dehalogenase-like hydrolase BKM78_10520 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BKM78_10520 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BKM78_10535 PF03608 PTS system enzyme II sorbitol-specific factor BKM78_10540 PF07663 Sorbitol phosphotransferase enzyme II C-terminus BKM78_10540 PF03612 Sorbitol phosphotransferase enzyme II N-terminus BKM78_10550 PF13685 Iron-containing alcohol dehydrogenase BKM78_10555 PF00381 PTS HPr component phosphorylation site BKM78_10560 PF05524 PEP-utilising enzyme, N-terminal BKM78_10560 PF00391 PEP-utilising enzyme, mobile domain BKM78_10560 PF02896 PEP-utilising enzyme, TIM barrel domain BKM78_10565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKM78_10565 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKM78_10575 PF02885 Glycosyl transferase family, helical bundle domain BKM78_10575 PF00591 Glycosyl transferase family, a/b domain BKM78_10575 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BKM78_10580 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain BKM78_10580 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain BKM78_10590 PF00171 Aldehyde dehydrogenase family BKM78_10600 PF00149 Calcineurin-like phosphoesterase BKM78_10605 PF00905 Penicillin binding protein transpeptidase domain BKM78_10605 PF00912 Transglycosylase BKM78_10610 PF02467 Transcription factor WhiB BKM78_10615 PF00293 NUDIX domain BKM78_10620 PF08534 Redoxin BKM78_10625 PF00633 Helix-hairpin-helix motif BKM78_10625 PF00730 HhH-GPD superfamily base excision DNA repair protein BKM78_10625 PF10576 Iron-sulfur binding domain of endonuclease III BKM78_10640 PF08241 Methyltransferase domain BKM78_10650 PF00437 Type II/IV secretion system protein BKM78_10665 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain BKM78_10665 PF01522 Polysaccharide deacetylase BKM78_10670 PF00271 Helicase conserved C-terminal domain BKM78_10670 PF00270 DEAD/DEAH box helicase BKM78_10670 PF09369 Domain of unknown function (DUF1998) BKM78_10690 PF00248 Aldo/keto reductase family BKM78_10695 PF17827 PrmC N-terminal domain BKM78_10695 PF05175 Methyltransferase small domain BKM78_10700 PF01131 DNA topoisomerase BKM78_10700 PF01751 Toprim domain BKM78_10700 PF13368 Topoisomerase C-terminal repeat BKM78_10710 PF02223 Thymidylate kinase BKM78_10715 PF12169 DNA polymerase III subunits gamma and tau domain III BKM78_10725 PF04468 PSP1 C-terminal conserved region BKM78_10730 PF00561 alpha/beta hydrolase fold BKM78_10750 PF05448 Acetyl xylan esterase (AXE1) BKM78_10760 PF01593 Flavin containing amine oxidoreductase BKM78_10770 PF00543 Nitrogen regulatory protein P-II BKM78_10775 PF00909 Ammonium Transporter Family BKM78_10790 PF00719 Inorganic pyrophosphatase BKM78_10805 PF01171 PP-loop family BKM78_10820 PF01227 GTP cyclohydrolase I BKM78_10825 PF00809 Pterin binding enzyme BKM78_10830 PF02152 Dihydroneopterin aldolase BKM78_10835 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BKM78_10850 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BKM78_10860 PF10431 C-terminal, D2-small domain, of ClpB protein BKM78_10860 PF00004 ATPase family associated with various cellular activities (AAA) BKM78_10860 PF17871 AAA lid domain BKM78_10860 PF07724 AAA domain (Cdc48 subfamily) BKM78_10860 PF02861 Clp amino terminal domain, pathogenicity island component BKM78_10865 PF02656 Domain of unknown function (DUF202) BKM78_10870 PF02656 Domain of unknown function (DUF202) BKM78_10880 PF08402 TOBE domain BKM78_10880 PF00005 ABC transporter BKM78_10895 PF02457 DisA bacterial checkpoint controller nucleotide-binding BKM78_10895 PF10635 DisA bacterial checkpoint controller linker region BKM78_10900 PF03109 ABC1 family BKM78_10910 PF13411 MerR HTH family regulatory protein BKM78_10915 PF18073 Rubredoxin metal binding domain BKM78_10915 PF06745 KaiC BKM78_10925 PF01261 Xylose isomerase-like TIM barrel BKM78_10940 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BKM78_10945 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BKM78_10955 PF01118 Semialdehyde dehydrogenase, NAD binding domain BKM78_10955 PF02774 Semialdehyde dehydrogenase, dimerisation domain BKM78_10960 PF03807 NADP oxidoreductase coenzyme F420-dependent BKM78_10960 PF14748 Pyrroline-5-carboxylate reductase dimerisation BKM78_10975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKM78_10975 PF10414 Sirohaem synthase dimerisation region BKM78_10975 PF14824 Sirohaem biosynthesis protein central BKM78_10980 PF00300 Histidine phosphatase superfamily (branch 1) BKM78_10985 PF08534 Redoxin BKM78_10990 PF02683 Cytochrome C biogenesis protein transmembrane region BKM78_10995 PF05140 ResB-like family BKM78_11000 PF01578 Cytochrome C assembly protein BKM78_11010 PF00106 short chain dehydrogenase BKM78_11015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BKM78_11015 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKM78_11020 PF00933 Glycosyl hydrolase family 3 N terminal domain BKM78_11030 PF00005 ABC transporter BKM78_11035 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_11040 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_11045 PF12849 PBP superfamily domain BKM78_11050 PF00872 Transposase, Mutator family BKM78_11055 PF13276 HTH-like domain BKM78_11055 PF00665 Integrase core domain BKM78_11060 PF01527 Transposase BKM78_11075 PF01695 IstB-like ATP binding protein BKM78_11085 PF03928 Haem-degrading BKM78_11090 PF02733 Dak1 domain BKM78_11095 PF02734 DAK2 domain BKM78_11100 PF13419 Haloacid dehalogenase-like hydrolase BKM78_11105 PF01116 Fructose-bisphosphate aldolase class-II BKM78_11110 PF00392 Bacterial regulatory proteins, gntR family BKM78_11115 PF02779 Transketolase, pyrimidine binding domain BKM78_11115 PF02780 Transketolase, C-terminal domain BKM78_11115 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BKM78_11120 PF00456 Transketolase, thiamine diphosphate binding domain BKM78_11125 PF02502 Ribose/Galactose Isomerase BKM78_11130 PF13344 Haloacid dehalogenase-like hydrolase BKM78_11130 PF18407 GCN5-related N-acetyltransferase like domain BKM78_11145 PF00872 Transposase, Mutator family BKM78_11150 PF00293 NUDIX domain BKM78_11150 PF00300 Histidine phosphatase superfamily (branch 1) BKM78_11160 PF00486 Transcriptional regulatory protein, C terminal BKM78_11170 PF02580 D-Tyr-tRNA(Tyr) deacylase BKM78_11175 PF08768 Domain of unknown function (DUF1794) BKM78_11180 PF01571 Aminomethyltransferase folate-binding domain BKM78_11190 PF08534 Redoxin BKM78_11200 PF01451 Low molecular weight phosphotyrosine protein phosphatase BKM78_11240 PF00391 PEP-utilising enzyme, mobile domain BKM78_11240 PF00381 PTS HPr component phosphorylation site BKM78_11240 PF03610 PTS system fructose IIA component BKM78_11240 PF05524 PEP-utilising enzyme, N-terminal BKM78_11245 PF02734 DAK2 domain BKM78_11250 PF02733 Dak1 domain BKM78_11255 PF00085 Thioredoxin BKM78_11260 PF00709 Adenylosuccinate synthetase BKM78_11265 PF02844 Phosphoribosylglycinamide synthetase, N domain BKM78_11265 PF02843 Phosphoribosylglycinamide synthetase, C domain BKM78_11265 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BKM78_11275 PF00440 Bacterial regulatory proteins, tetR family BKM78_11280 PF00108 Thiolase, N-terminal domain BKM78_11280 PF02803 Thiolase, C-terminal domain BKM78_11300 PF00206 Lyase BKM78_11300 PF10397 Adenylosuccinate lyase C-terminus BKM78_11320 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BKM78_11320 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BKM78_11325 PF01507 Phosphoadenosine phosphosulfate reductase family BKM78_11330 PF01507 Phosphoadenosine phosphosulfate reductase family BKM78_11335 PF00009 Elongation factor Tu GTP binding domain BKM78_11345 PF01259 SAICAR synthetase BKM78_11350 PF01063 Amino-transferase class IV BKM78_11355 PF02245 Methylpurine-DNA glycosylase (MPG) BKM78_11360 PF00155 Aminotransferase class I and II BKM78_11375 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BKM78_11385 PF01541 GIY-YIG catalytic domain BKM78_11390 PF11838 ERAP1-like C-terminal domain BKM78_11390 PF01433 Peptidase family M1 domain BKM78_11395 PF00586 AIR synthase related protein, N-terminal domain BKM78_11395 PF02769 AIR synthase related protein, C-terminal domain BKM78_11395 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BKM78_11400 PF01546 Peptidase family M20/M25/M40 BKM78_11410 PF00665 Integrase core domain BKM78_11415 PF00293 NUDIX domain BKM78_11420 PF10415 Fumarase C C-terminus BKM78_11420 PF00206 Lyase BKM78_11425 PF00378 Enoyl-CoA hydratase/isomerase BKM78_11435 PF02225 PA domain BKM78_11435 PF04389 Peptidase family M28 BKM78_11440 PF00381 PTS HPr component phosphorylation site BKM78_11450 PF00356 Bacterial regulatory proteins, lacI family BKM78_11460 PF14785 Maltose transport system permease protein MalF P2 domain BKM78_11460 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_11465 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_11475 PF04055 Radical SAM superfamily BKM78_11475 PF06463 Molybdenum Cofactor Synthesis C BKM78_11480 PF12804 MobA-like NTP transferase domain BKM78_11485 PF01568 Molydopterin dinucleotide binding domain BKM78_11485 PF00384 Molybdopterin oxidoreductase BKM78_11490 PF13247 4Fe-4S dicluster domain BKM78_11490 PF14711 Respiratory nitrate reductase beta C-terminal BKM78_11495 PF02613 Nitrate reductase delta subunit BKM78_11495 PF02665 Nitrate reductase gamma subunit BKM78_11495 PF00384 Molybdopterin oxidoreductase BKM78_11500 PF00384 Molybdopterin oxidoreductase BKM78_11500 PF02613 Nitrate reductase delta subunit BKM78_11500 PF02665 Nitrate reductase gamma subunit BKM78_11510 PF07690 Major Facilitator Superfamily BKM78_11515 PF02391 MoaE protein BKM78_11520 PF03454 MoeA C-terminal region (domain IV) BKM78_11520 PF00994 Probable molybdopterin binding domain BKM78_11520 PF03453 MoeA N-terminal region (domain I and II) BKM78_11530 PF01967 MoaC family BKM78_11535 PF01967 MoaC family BKM78_11535 PF00994 Probable molybdopterin binding domain BKM78_11545 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_11550 PF03459 TOBE domain BKM78_11550 PF00005 ABC transporter BKM78_11555 PF00156 Phosphoribosyl transferase domain BKM78_11560 PF00586 AIR synthase related protein, N-terminal domain BKM78_11560 PF02769 AIR synthase related protein, C-terminal domain BKM78_11565 PF00343 Carbohydrate phosphorylase BKM78_11580 PF05025 RbsD / FucU transport protein family BKM78_11590 PF00005 ABC transporter BKM78_11595 PF02653 Branched-chain amino acid transport system / permease component BKM78_11600 PF13407 Periplasmic binding protein domain BKM78_11610 PF00356 Bacterial regulatory proteins, lacI family BKM78_11615 PF03971 Monomeric isocitrate dehydrogenase BKM78_11650 PF00118 TCP-1/cpn60 chaperonin family BKM78_11660 PF00128 Alpha amylase, catalytic domain BKM78_11675 PF01226 Formate/nitrite transporter BKM78_11680 PF02091 Glycyl-tRNA synthetase alpha subunit BKM78_11680 PF02092 Glycyl-tRNA synthetase beta subunit BKM78_11685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKM78_11690 PF16916 Dimerisation domain of Zinc Transporter BKM78_11690 PF01545 Cation efflux family BKM78_11700 PF10509 Galactokinase galactose-binding signature BKM78_11700 PF08544 GHMP kinases C terminal BKM78_11700 PF00288 GHMP kinases N terminal domain BKM78_11705 PF00483 Nucleotidyl transferase BKM78_11710 PF02734 DAK2 domain BKM78_11720 PF00501 AMP-binding enzyme BKM78_11720 PF13193 AMP-binding enzyme C-terminal domain BKM78_11725 PF01040 UbiA prenyltransferase family BKM78_11730 PF13378 Enolase C-terminal domain-like BKM78_11730 PF18374 Enolase N-terminal domain-like BKM78_11735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKM78_11745 PF01209 ubiE/COQ5 methyltransferase family BKM78_11750 PF00561 alpha/beta hydrolase fold BKM78_11755 PF00005 ABC transporter BKM78_11765 PF00425 chorismate binding enzyme BKM78_11770 PF01494 FAD binding domain BKM78_11775 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BKM78_11780 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BKM78_11785 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BKM78_11790 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BKM78_11800 PF10531 SLBB domain BKM78_11800 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BKM78_11800 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BKM78_11805 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BKM78_11805 PF01568 Molydopterin dinucleotide binding domain BKM78_11805 PF00384 Molybdopterin oxidoreductase BKM78_11810 PF00146 NADH dehydrogenase BKM78_11815 PF12838 4Fe-4S dicluster domain BKM78_11820 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BKM78_11825 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BKM78_11830 PF00361 Proton-conducting membrane transporter BKM78_11830 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BKM78_11835 PF00361 Proton-conducting membrane transporter BKM78_11840 PF00361 Proton-conducting membrane transporter BKM78_11845 PF00348 Polyprenyl synthetase BKM78_11850 PF05649 Peptidase family M13 BKM78_11850 PF01431 Peptidase family M13 BKM78_11855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKM78_11860 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BKM78_11860 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BKM78_11860 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BKM78_11865 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BKM78_11870 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BKM78_11875 PF00037 4Fe-4S binding domain BKM78_11890 PF04461 Protein of unknown function (DUF520) BKM78_11900 PF01048 Phosphorylase superfamily BKM78_11915 PF00471 Ribosomal protein L33 BKM78_11920 PF13452 N-terminal half of MaoC dehydratase BKM78_11930 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BKM78_11930 PF01565 FAD binding domain BKM78_11935 PF01546 Peptidase family M20/M25/M40 BKM78_11935 PF07687 Peptidase dimerisation domain BKM78_11940 PF00664 ABC transporter transmembrane region BKM78_11940 PF00005 ABC transporter BKM78_11945 PF00005 ABC transporter BKM78_11945 PF00664 ABC transporter transmembrane region BKM78_11955 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BKM78_11960 PF02357 Transcription termination factor nusG BKM78_11965 PF00298 Ribosomal protein L11, RNA binding domain BKM78_11965 PF03946 Ribosomal protein L11, N-terminal domain BKM78_11970 PF00687 Ribosomal protein L1p/L10e family BKM78_11975 PF00378 Enoyl-CoA hydratase/isomerase BKM78_11980 PF00300 Histidine phosphatase superfamily (branch 1) BKM78_11980 PF13456 Reverse transcriptase-like BKM78_11985 PF01256 Carbohydrate kinase BKM78_11990 PF00331 Glycosyl hydrolase family 10 BKM78_11990 PF00553 Cellulose binding domain BKM78_12000 PF00005 ABC transporter BKM78_12005 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_12020 PF00466 Ribosomal protein L10 BKM78_12025 PF16320 Ribosomal protein L7/L12 dimerisation domain BKM78_12025 PF00542 Ribosomal protein L7/L12 C-terminal domain BKM78_12030 PF04565 RNA polymerase Rpb2, domain 3 BKM78_12030 PF10385 RNA polymerase beta subunit external 1 domain BKM78_12030 PF00562 RNA polymerase Rpb2, domain 6 BKM78_12030 PF04563 RNA polymerase beta subunit BKM78_12030 PF04560 RNA polymerase Rpb2, domain 7 BKM78_12030 PF04561 RNA polymerase Rpb2, domain 2 BKM78_12035 PF00623 RNA polymerase Rpb1, domain 2 BKM78_12035 PF04998 RNA polymerase Rpb1, domain 5 BKM78_12035 PF04997 RNA polymerase Rpb1, domain 1 BKM78_12035 PF04983 RNA polymerase Rpb1, domain 3 BKM78_12035 PF05000 RNA polymerase Rpb1, domain 4 BKM78_12040 PF00164 Ribosomal protein S12/S23 BKM78_12045 PF00177 Ribosomal protein S7p/S5e BKM78_12050 PF00009 Elongation factor Tu GTP binding domain BKM78_12050 PF03764 Elongation factor G, domain IV BKM78_12050 PF00679 Elongation factor G C-terminus BKM78_12050 PF03144 Elongation factor Tu domain 2 BKM78_12050 PF14492 Elongation Factor G, domain II BKM78_12055 PF00009 Elongation factor Tu GTP binding domain BKM78_12055 PF03144 Elongation factor Tu domain 2 BKM78_12055 PF03143 Elongation factor Tu C-terminal domain BKM78_12060 PF00749 tRNA synthetases class I (E and Q), catalytic domain BKM78_12060 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BKM78_12070 PF00749 tRNA synthetases class I (E and Q), catalytic domain BKM78_12075 PF00011 Hsp20/alpha crystallin family BKM78_12080 PF13409 Glutathione S-transferase, N-terminal domain BKM78_12085 PF04851 Type III restriction enzyme, res subunit BKM78_12090 PF03441 FAD binding domain of DNA photolyase BKM78_12090 PF00875 DNA photolyase BKM78_12105 PF01228 Glycine radical BKM78_12105 PF02901 Pyruvate formate lyase-like BKM78_12110 PF04055 Radical SAM superfamily BKM78_12115 PF00338 Ribosomal protein S10p/S20e BKM78_12120 PF00297 Ribosomal protein L3 BKM78_12125 PF00573 Ribosomal protein L4/L1 family BKM78_12130 PF00276 Ribosomal protein L23 BKM78_12135 PF03947 Ribosomal Proteins L2, C-terminal domain BKM78_12135 PF00181 Ribosomal Proteins L2, RNA binding domain BKM78_12140 PF00203 Ribosomal protein S19 BKM78_12145 PF00237 Ribosomal protein L22p/L17e BKM78_12150 PF07650 KH domain BKM78_12150 PF00189 Ribosomal protein S3, C-terminal domain BKM78_12155 PF00252 Ribosomal protein L16p/L10e BKM78_12160 PF00831 Ribosomal L29 protein BKM78_12165 PF00366 Ribosomal protein S17 BKM78_12175 PF01370 NAD dependent epimerase/dehydratase family BKM78_12180 PF00270 DEAD/DEAH box helicase BKM78_12180 PF00271 Helicase conserved C-terminal domain BKM78_12180 PF12300 ATP-dependent RNA helicase RhlB BKM78_12185 PF00238 Ribosomal protein L14p/L23e BKM78_12190 PF00467 KOW motif BKM78_12190 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BKM78_12195 PF00281 Ribosomal protein L5 BKM78_12195 PF00673 ribosomal L5P family C-terminus BKM78_12200 PF00253 Ribosomal protein S14p/S29e BKM78_12205 PF00410 Ribosomal protein S8 BKM78_12210 PF00347 Ribosomal protein L6 BKM78_12215 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BKM78_12220 PF00333 Ribosomal protein S5, N-terminal domain BKM78_12220 PF03719 Ribosomal protein S5, C-terminal domain BKM78_12225 PF00327 Ribosomal protein L30p/L7e BKM78_12230 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BKM78_12235 PF00344 SecY translocase BKM78_12245 PF00557 Metallopeptidase family M24 BKM78_12260 PF00294 pfkB family carbohydrate kinase BKM78_12265 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_12270 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_12275 PF01547 Bacterial extracellular solute-binding protein BKM78_12285 PF02056 Family 4 glycosyl hydrolase BKM78_12285 PF11975 Family 4 glycosyl hydrolase C-terminal domain BKM78_12295 PF01176 Translation initiation factor 1A / IF-1 BKM78_12300 PF00444 Ribosomal protein L36 BKM78_12305 PF00416 Ribosomal protein S13/S18 BKM78_12310 PF00411 Ribosomal protein S11 BKM78_12315 PF01479 S4 domain BKM78_12315 PF00163 Ribosomal protein S4/S9 N-terminal domain BKM78_12320 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BKM78_12320 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BKM78_12320 PF01000 RNA polymerase Rpb3/RpoA insert domain BKM78_12325 PF01196 Ribosomal protein L17 BKM78_12340 PF02653 Branched-chain amino acid transport system / permease component BKM78_12345 PF00005 ABC transporter BKM78_12350 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BKM78_12350 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BKM78_12360 PF05175 Methyltransferase small domain BKM78_12360 PF08468 Methyltransferase small domain N-terminal BKM78_12365 PF01416 tRNA pseudouridine synthase BKM78_12370 PF02390 Putative methyltransferase BKM78_12375 PF03733 Inner membrane component domain BKM78_12385 PF04127 DNA / pantothenate metabolism flavoprotein BKM78_12385 PF02441 Flavoprotein BKM78_12390 PF03144 Elongation factor Tu domain 2 BKM78_12390 PF14492 Elongation Factor G, domain II BKM78_12390 PF03764 Elongation factor G, domain IV BKM78_12390 PF00009 Elongation factor Tu GTP binding domain BKM78_12390 PF00679 Elongation factor G C-terminus BKM78_12395 PF00572 Ribosomal protein L13 BKM78_12400 PF00380 Ribosomal protein S9/S16 BKM78_12405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BKM78_12405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BKM78_12405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BKM78_12405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BKM78_12415 PF00575 S1 RNA binding domain BKM78_12415 PF00773 RNB domain BKM78_12430 PF04168 A predicted alpha-helical domain with a conserved ER motif. BKM78_12430 PF14403 Circularly permuted ATP-grasp type 2 BKM78_12435 PF08379 Bacterial transglutaminase-like N-terminal region BKM78_12435 PF01841 Transglutaminase-like superfamily BKM78_12445 PF00557 Metallopeptidase family M24 BKM78_12455 PF00120 Glutamine synthetase, catalytic domain BKM78_12455 PF03951 Glutamine synthetase, beta-Grasp domain BKM78_12465 PF03710 Glutamate-ammonia ligase adenylyltransferase BKM78_12465 PF08335 GlnD PII-uridylyltransferase BKM78_12470 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_12475 PF09084 NMT1/THI5 like BKM78_12480 PF08240 Alcohol dehydrogenase GroES-like domain BKM78_12480 PF00107 Zinc-binding dehydrogenase BKM78_12485 PF03176 MMPL family BKM78_12490 PF03951 Glutamine synthetase, beta-Grasp domain BKM78_12490 PF00120 Glutamine synthetase, catalytic domain BKM78_12500 PF00005 ABC transporter BKM78_12515 PF01541 GIY-YIG catalytic domain BKM78_12520 PF00005 ABC transporter BKM78_12520 PF12848 ABC transporter BKM78_12520 PF16326 ABC transporter C-terminal domain BKM78_12530 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BKM78_12530 PF04055 Radical SAM superfamily BKM78_12540 PF03099 Biotin/lipoate A/B protein ligase family BKM78_12555 PF11066 Protein of unknown function (DUF2867) BKM78_12555 PF13460 NAD(P)H-binding BKM78_12560 PF01209 ubiE/COQ5 methyltransferase family BKM78_12565 PF01593 Flavin containing amine oxidoreductase BKM78_12575 PF01593 Flavin containing amine oxidoreductase BKM78_12580 PF00293 NUDIX domain BKM78_12585 PF13411 MerR HTH family regulatory protein BKM78_12585 PF02607 B12 binding domain BKM78_12585 PF02310 B12 binding domain BKM78_12590 PF02817 e3 binding domain BKM78_12590 PF00364 Biotin-requiring enzyme BKM78_12590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BKM78_12595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BKM78_12595 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKM78_12605 PF02789 Cytosol aminopeptidase family, N-terminal domain BKM78_12605 PF00883 Cytosol aminopeptidase family, catalytic domain BKM78_12635 PF02595 Glycerate kinase family BKM78_12640 PF01521 Iron-sulphur cluster biosynthesis BKM78_12645 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BKM78_12650 PF00115 Cytochrome C and Quinol oxidase polypeptide I BKM78_12655 PF12270 Cytochrome c oxidase subunit IV BKM78_12665 PF00571 CBS domain BKM78_12665 PF00478 IMP dehydrogenase / GMP reductase domain BKM78_12670 PF02678 Pirin BKM78_12670 PF05726 Pirin C-terminal cupin domain BKM78_12680 PF00355 Rieske [2Fe-2S] domain BKM78_12685 PF00034 Cytochrome c BKM78_12685 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKM78_12690 PF00510 Cytochrome c oxidase subunit III BKM78_12705 PF00591 Glycosyl transferase family, a/b domain BKM78_12705 PF02885 Glycosyl transferase family, helical bundle domain BKM78_12720 PF06224 Winged helix DNA-binding domain BKM78_12725 PF01451 Low molecular weight phosphotyrosine protein phosphatase BKM78_12735 PF02719 Polysaccharide biosynthesis protein BKM78_12750 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BKM78_12760 PF00005 ABC transporter BKM78_12760 PF13732 Domain of unknown function (DUF4162) BKM78_12770 PF00929 Exonuclease BKM78_12770 PF01541 GIY-YIG catalytic domain BKM78_12775 PF00877 NlpC/P60 family BKM78_12795 PF00196 Bacterial regulatory proteins, luxR family BKM78_12795 PF00072 Response regulator receiver domain BKM78_12800 PF01474 Class-II DAHP synthetase family BKM78_12805 PF01212 Beta-eliminating lyase BKM78_12820 PF03793 PASTA domain BKM78_12820 PF00069 Protein kinase domain BKM78_12825 PF02581 Thiamine monophosphate synthase BKM78_12825 PF17792 ThiD2 family BKM78_12840 PF02219 Methylenetetrahydrofolate reductase BKM78_12845 PF13538 UvrD-like helicase C-terminal domain BKM78_12860 PF13462 Thioredoxin BKM78_12860 PF06965 Na+/H+ antiporter 1 BKM78_12880 PF02811 PHP domain BKM78_12880 PF07733 Bacterial DNA polymerase III alpha NTPase domain BKM78_12880 PF14579 Helix-hairpin-helix motif BKM78_12880 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BKM78_12885 PF11799 impB/mucB/samB family C-terminal domain BKM78_12885 PF00817 impB/mucB/samB family BKM78_12890 PF07722 Peptidase C26 BKM78_12910 PF17863 AAA lid domain BKM78_12910 PF07726 ATPase family associated with various cellular activities (AAA) BKM78_12915 PF02381 MraZ protein, putative antitoxin-like BKM78_12920 PF01795 MraW methylase family BKM78_12930 PF03717 Penicillin-binding Protein dimerisation domain BKM78_12930 PF00905 Penicillin binding protein transpeptidase domain BKM78_12935 PF01225 Mur ligase family, catalytic domain BKM78_12935 PF08245 Mur ligase middle domain BKM78_12935 PF02875 Mur ligase family, glutamate ligase domain BKM78_12940 PF08245 Mur ligase middle domain BKM78_12940 PF02875 Mur ligase family, glutamate ligase domain BKM78_12940 PF01225 Mur ligase family, catalytic domain BKM78_12945 PF00953 Glycosyl transferase family 4 BKM78_12945 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BKM78_12950 PF08245 Mur ligase middle domain BKM78_12950 PF02875 Mur ligase family, glutamate ligase domain BKM78_12955 PF01098 Cell cycle protein BKM78_12960 PF04101 Glycosyltransferase family 28 C-terminal domain BKM78_12960 PF03033 Glycosyltransferase family 28 N-terminal domain BKM78_12965 PF08245 Mur ligase middle domain BKM78_12965 PF01225 Mur ligase family, catalytic domain BKM78_12965 PF02875 Mur ligase family, glutamate ligase domain BKM78_12975 PF00091 Tubulin/FtsZ family, GTPase domain BKM78_12975 PF12327 FtsZ family, C-terminal domain BKM78_12980 PF04472 Cell division protein SepF BKM78_13000 PF01252 Signal peptidase (SPase) II BKM78_13005 PF00849 RNA pseudouridylate synthase BKM78_13010 PF02887 Pyruvate kinase, alpha/beta domain BKM78_13010 PF00224 Pyruvate kinase, barrel domain BKM78_13020 PF00072 Response regulator receiver domain BKM78_13020 PF03861 ANTAR domain BKM78_13025 PF00872 Transposase, Mutator family BKM78_13035 PF03061 Thioesterase superfamily BKM78_13040 PF00476 DNA polymerase family A BKM78_13040 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BKM78_13040 PF01367 5'-3' exonuclease, C-terminal SAM fold BKM78_13050 PF00575 S1 RNA binding domain BKM78_13055 PF01121 Dephospho-CoA kinase BKM78_13055 PF04229 GrpB protein BKM78_13060 PF02347 Glycine cleavage system P-protein BKM78_13065 PF01597 Glycine cleavage H-protein BKM78_13070 PF01571 Aminomethyltransferase folate-binding domain BKM78_13070 PF08669 Glycine cleavage T-protein C-terminal barrel domain BKM78_13075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKM78_13075 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKM78_13080 PF04851 Type III restriction enzyme, res subunit BKM78_13080 PF12344 Ultra-violet resistance protein B BKM78_13080 PF02151 UvrB/uvrC motif BKM78_13080 PF17757 UvrB interaction domain BKM78_13080 PF00271 Helicase conserved C-terminal domain BKM78_13090 PF00005 ABC transporter BKM78_13090 PF17755 UvrA DNA-binding domain BKM78_13090 PF17760 UvrA interaction domain BKM78_13095 PF13614 AAA domain BKM78_13115 PF00872 Transposase, Mutator family BKM78_13135 PF13439 Glycosyltransferase Family 4 BKM78_13140 PF00953 Glycosyl transferase family 4 BKM78_13140 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BKM78_13145 PF02719 Polysaccharide biosynthesis protein BKM78_13150 PF08459 UvrC Helix-hairpin-helix N-terminal BKM78_13150 PF02151 UvrB/uvrC motif BKM78_13150 PF01541 GIY-YIG catalytic domain BKM78_13155 PF02632 BioY family BKM78_13160 PF00005 ABC transporter BKM78_13170 PF03668 P-loop ATPase protein family BKM78_13175 PF01933 Uncharacterised protein family UPF0052 BKM78_13180 PF10298 WhiA N-terminal LAGLIDADG-like domain BKM78_13180 PF02650 WhiA C-terminal HTH domain BKM78_13180 PF14527 WhiA LAGLIDADG-like domain BKM78_13185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BKM78_13185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BKM78_13190 PF00162 Phosphoglycerate kinase BKM78_13195 PF00121 Triosephosphate isomerase BKM78_13200 PF03840 Preprotein translocase SecG subunit BKM78_13210 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BKM78_13220 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BKM78_13220 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BKM78_13225 PF01040 UbiA prenyltransferase family BKM78_13235 PF07690 Major Facilitator Superfamily BKM78_13250 PF01432 Peptidase family M3 BKM78_13255 PF02628 Cytochrome oxidase assembly protein BKM78_13275 PF01458 Uncharacterized protein family (UPF0051) BKM78_13280 PF01458 Uncharacterized protein family (UPF0051) BKM78_13285 PF00355 Rieske [2Fe-2S] domain BKM78_13290 PF00005 ABC transporter BKM78_13295 PF00266 Aminotransferase class-V BKM78_13300 PF01592 NifU-like N terminal domain BKM78_13305 PF01883 Iron-sulfur cluster assembly protein BKM78_13325 PF00005 ABC transporter BKM78_13340 PF00072 Response regulator receiver domain BKM78_13340 PF00196 Bacterial regulatory proteins, luxR family BKM78_13345 PF00561 alpha/beta hydrolase fold BKM78_13350 PF00892 EamA-like transporter family BKM78_13355 PF16326 ABC transporter C-terminal domain BKM78_13355 PF00005 ABC transporter BKM78_13355 PF12848 ABC transporter BKM78_13360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BKM78_13360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BKM78_13360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BKM78_13360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BKM78_13370 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BKM78_13375 PF13649 Methyltransferase domain BKM78_13400 PF00005 ABC transporter BKM78_13410 PF01145 SPFH domain / Band 7 family BKM78_13420 PF13593 SBF-like CPA transporter family (DUF4137) BKM78_13425 PF00117 Glutamine amidotransferase class-I BKM78_13425 PF00425 chorismate binding enzyme BKM78_13425 PF04715 Anthranilate synthase component I, N terminal region BKM78_13430 PF00588 SpoU rRNA Methylase family BKM78_13450 PF01327 Polypeptide deformylase BKM78_13455 PF00589 Phage integrase family BKM78_13455 PF02899 Phage integrase, N-terminal SAM-like domain BKM78_13460 PF01551 Peptidase family M23 BKM78_13460 PF04225 Opacity-associated protein A LysM-like domain BKM78_13465 PF00318 Ribosomal protein S2 BKM78_13470 PF00889 Elongation factor TS BKM78_13475 PF00696 Amino acid kinase family BKM78_13480 PF01765 Ribosome recycling factor BKM78_13490 PF04055 Radical SAM superfamily BKM78_13495 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BKM78_13495 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BKM78_13500 PF01636 Phosphotransferase enzyme family BKM78_13505 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BKM78_13505 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BKM78_13505 PF13288 DXP reductoisomerase C-terminal domain BKM78_13510 PF17820 PDZ domain BKM78_13510 PF02163 Peptidase family M50 BKM78_13515 PF04551 GcpE protein BKM78_13520 PF13508 Acetyltransferase (GNAT) domain BKM78_13520 PF00583 Acetyltransferase (GNAT) family BKM78_13525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BKM78_13525 PF04073 Aminoacyl-tRNA editing domain BKM78_13525 PF03129 Anticodon binding domain BKM78_13535 PF17384 RimP C-terminal SH3 domain BKM78_13535 PF02576 RimP N-terminal domain BKM78_13540 PF08529 NusA N-terminal domain BKM78_13540 PF13184 NusA-like KH domain BKM78_13550 PF06737 Transglycosylase-like domain BKM78_13550 PF03990 G5-linked-Ubiquitin-like domain BKM78_13550 PF07501 G5 domain BKM78_13565 PF11987 Translation-initiation factor 2 BKM78_13565 PF00009 Elongation factor Tu GTP binding domain BKM78_13565 PF04760 Translation initiation factor IF-2, N-terminal region BKM78_13570 PF02033 Ribosome-binding factor A BKM78_13575 PF09142 tRNA Pseudouridine synthase II, C terminal BKM78_13575 PF01509 TruB family pseudouridylate synthase (N terminal domain) BKM78_13575 PF16198 tRNA pseudouridylate synthase B C-terminal domain BKM78_13580 PF06574 FAD synthetase BKM78_13580 PF01687 Riboflavin kinase BKM78_13590 PF00312 Ribosomal protein S15 BKM78_13595 PF00171 Aldehyde dehydrogenase family BKM78_13595 PF01619 Proline dehydrogenase BKM78_13595 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BKM78_13595 PF14850 DNA-binding domain of Proline dehydrogenase BKM78_13600 PF00575 S1 RNA binding domain BKM78_13600 PF01138 3' exoribonuclease family, domain 1 BKM78_13600 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BKM78_13600 PF00013 KH domain BKM78_13605 PF05173 Dihydrodipicolinate reductase, C-terminus BKM78_13605 PF01113 Dihydrodipicolinate reductase, N-terminus BKM78_13610 PF02028 BCCT, betaine/carnitine/choline family transporter BKM78_13620 PF17770 Ribonuclease J C-terminal domain BKM78_13620 PF12706 Beta-lactamase superfamily domain BKM78_13620 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BKM78_13625 PF00829 Ribosomal prokaryotic L21 protein BKM78_13630 PF01016 Ribosomal L27 protein BKM78_13635 PF01018 GTP1/OBG BKM78_13635 PF09269 Domain of unknown function (DUF1967) BKM78_13635 PF01926 50S ribosome-binding GTPase BKM78_13640 PF01472 PUA domain BKM78_13640 PF00696 Amino acid kinase family BKM78_13655 PF00171 Aldehyde dehydrogenase family BKM78_13660 PF01467 Cytidylyltransferase-like BKM78_13670 PF00300 Histidine phosphatase superfamily (branch 1) BKM78_13685 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BKM78_13685 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BKM78_13685 PF01488 Shikimate / quinate 5-dehydrogenase BKM78_13690 PF01208 Uroporphyrinogen decarboxylase (URO-D) BKM78_13700 PF03900 Porphobilinogen deaminase, C-terminal domain BKM78_13700 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BKM78_13705 PF00490 Delta-aminolevulinic acid dehydratase BKM78_13710 PF00202 Aminotransferase class-III BKM78_13715 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BKM78_13715 PF03900 Porphobilinogen deaminase, C-terminal domain BKM78_13730 PF00581 Rhodanese-like domain BKM78_13735 PF02585 GlcNAc-PI de-N-acetylase BKM78_13740 PF00465 Iron-containing alcohol dehydrogenase BKM78_13745 PF07085 DRTGG domain BKM78_13745 PF01515 Phosphate acetyl/butaryl transferase BKM78_13770 PF06249 Ethanolamine utilisation protein EutQ BKM78_13775 PF00936 BMC domain BKM78_13780 PF00465 Iron-containing alcohol dehydrogenase BKM78_13780 PF00171 Aldehyde dehydrogenase family BKM78_13785 PF00936 BMC domain BKM78_13790 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BKM78_13795 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BKM78_13800 PF06277 Ethanolamine utilisation protein EutA BKM78_13805 PF03319 Ethanolamine utilisation protein EutN/carboxysome BKM78_13810 PF04346 Ethanolamine utilisation protein, EutH BKM78_13820 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_13825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKM78_13825 PF00005 ABC transporter BKM78_13830 PF00005 ABC transporter BKM78_13830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKM78_13835 PF00701 Dihydrodipicolinate synthetase family BKM78_13840 PF00480 ROK family BKM78_13845 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase BKM78_13850 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase BKM78_13850 PF13088 BNR repeat-like domain BKM78_13850 PF00754 F5/8 type C domain BKM78_13865 PF05368 NmrA-like family BKM78_13870 PF00970 Oxidoreductase FAD-binding domain BKM78_13870 PF00042 Globin BKM78_13870 PF00175 Oxidoreductase NAD-binding domain BKM78_13875 PF13407 Periplasmic binding protein domain BKM78_13880 PF02653 Branched-chain amino acid transport system / permease component BKM78_13885 PF00005 ABC transporter BKM78_13890 PF00480 ROK family BKM78_13895 PF00005 ABC transporter BKM78_13900 PF00356 Bacterial regulatory proteins, lacI family BKM78_13910 PF01384 Phosphate transporter family BKM78_13930 PF07486 Cell Wall Hydrolase BKM78_13930 PF01471 Putative peptidoglycan binding domain BKM78_13950 PF00005 ABC transporter BKM78_13950 PF02687 FtsX-like permease family BKM78_13950 PF12704 MacB-like periplasmic core domain BKM78_13955 PF02687 FtsX-like permease family BKM78_13955 PF00005 ABC transporter BKM78_13955 PF12704 MacB-like periplasmic core domain BKM78_13970 PF00294 pfkB family carbohydrate kinase BKM78_13975 PF09334 tRNA synthetases class I (M) BKM78_13975 PF08264 Anticodon-binding domain of tRNA BKM78_13975 PF00133 tRNA synthetases class I (I, L, M and V) BKM78_13975 PF13603 Leucyl-tRNA synthetase, Domain 2 BKM78_13980 PF10531 SLBB domain BKM78_13995 PF01649 Ribosomal protein S20 BKM78_14000 PF00679 Elongation factor G C-terminus BKM78_14000 PF03144 Elongation factor Tu domain 2 BKM78_14000 PF00009 Elongation factor Tu GTP binding domain BKM78_14000 PF06421 GTP-binding protein LepA C-terminus BKM78_14005 PF00465 Iron-containing alcohol dehydrogenase BKM78_14010 PF04055 Radical SAM superfamily BKM78_14020 PF00459 Inositol monophosphatase family BKM78_14030 PF08220 DeoR-like helix-turn-helix domain BKM78_14030 PF01628 HrcA protein C terminal domain BKM78_14035 PF00684 DnaJ central domain BKM78_14035 PF00226 DnaJ domain BKM78_14035 PF01556 DnaJ C terminal domain BKM78_14040 PF04452 RNA methyltransferase BKM78_14045 PF01702 Queuine tRNA-ribosyltransferase BKM78_14060 PF02562 PhoH-like protein BKM78_14065 PF02130 Uncharacterized protein family UPF0054 BKM78_14070 PF13520 Amino acid permease BKM78_14075 PF03471 Transporter associated domain BKM78_14075 PF01595 Cyclin M transmembrane N-terminal domain BKM78_14075 PF00571 CBS domain BKM78_14080 PF01926 50S ribosome-binding GTPase BKM78_14080 PF07650 KH domain BKM78_14085 PF01547 Bacterial extracellular solute-binding protein BKM78_14090 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_14095 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_14100 PF08502 LeuA allosteric (dimerisation) domain BKM78_14100 PF00682 HMGL-like BKM78_14105 PF00271 Helicase conserved C-terminal domain BKM78_14105 PF08148 DSHCT (NUC185) domain BKM78_14105 PF00270 DEAD/DEAH box helicase BKM78_14110 PF03061 Thioesterase superfamily BKM78_14115 PF01255 Putative undecaprenyl diphosphate synthase BKM78_14120 PF11967 Recombination protein O N terminal BKM78_14120 PF02565 Recombination protein O C terminal BKM78_14125 PF01475 Ferric uptake regulator family BKM78_14130 PF00950 ABC 3 transport family BKM78_14135 PF00005 ABC transporter BKM78_14140 PF01297 Zinc-uptake complex component A periplasmic BKM78_14145 PF01547 Bacterial extracellular solute-binding protein BKM78_14150 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_14155 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_14165 PF16874 Glycosyl hydrolase family 36 C-terminal domain BKM78_14165 PF16875 Glycosyl hydrolase family 36 N-terminal domain BKM78_14170 PF01047 MarR family BKM78_14170 PF00480 ROK family BKM78_14175 PF01207 Dihydrouridine synthase (Dus) BKM78_14185 PF00285 Citrate synthase, C-terminal domain BKM78_14190 PF13286 Phosphohydrolase-associated domain BKM78_14190 PF01966 HD domain BKM78_14195 PF10410 DnaB-helicase binding domain of primase BKM78_14195 PF08278 DNA primase DnaG DnaB-binding BKM78_14195 PF13662 Toprim domain BKM78_14195 PF01807 CHC2 zinc finger BKM78_14195 PF08275 DNA primase catalytic core, N-terminal domain BKM78_14205 PF00474 Sodium:solute symporter family BKM78_14210 PF00140 Sigma-70 factor, region 1.2 BKM78_14210 PF04545 Sigma-70, region 4 BKM78_14210 PF04539 Sigma-70 region 3 BKM78_14210 PF04542 Sigma-70 region 2 BKM78_14255 PF00437 Type II/IV secretion system protein BKM78_14315 PF01425 Amidase BKM78_14335 PF00248 Aldo/keto reductase family BKM78_14340 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BKM78_14350 PF13823 Alcohol dehydrogenase GroES-associated BKM78_14350 PF00107 Zinc-binding dehydrogenase BKM78_14350 PF08240 Alcohol dehydrogenase GroES-like domain BKM78_14355 PF07690 Major Facilitator Superfamily BKM78_14360 PF01022 Bacterial regulatory protein, arsR family BKM78_14365 PF01545 Cation efflux family BKM78_14375 PF01022 Bacterial regulatory protein, arsR family BKM78_14385 PF01202 Shikimate kinase BKM78_14415 PF00872 Transposase, Mutator family BKM78_14435 PF01695 IstB-like ATP binding protein BKM78_14440 PF02371 Transposase IS116/IS110/IS902 family BKM78_14440 PF01548 Transposase BKM78_14450 PF03069 Acetamidase/Formamidase family BKM78_14510 PF00251 Glycosyl hydrolases family 32 N-terminal domain BKM78_14510 PF08244 Glycosyl hydrolases family 32 C terminal BKM78_14515 PF00251 Glycosyl hydrolases family 32 N-terminal domain BKM78_14515 PF08244 Glycosyl hydrolases family 32 C terminal BKM78_14520 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_14525 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_14530 PF01547 Bacterial extracellular solute-binding protein BKM78_14535 PF00356 Bacterial regulatory proteins, lacI family BKM78_14540 PF10410 DnaB-helicase binding domain of primase BKM78_14540 PF08278 DNA primase DnaG DnaB-binding BKM78_14540 PF13662 Toprim domain BKM78_14540 PF08275 DNA primase catalytic core, N-terminal domain BKM78_14540 PF01807 CHC2 zinc finger BKM78_14545 PF00145 C-5 cytosine-specific DNA methylase BKM78_14565 PF01119 DNA mismatch repair protein, C-terminal domain BKM78_14565 PF08676 MutL C terminal dimerisation domain BKM78_14580 PF01380 SIS domain BKM78_14580 PF00571 CBS domain BKM78_14590 PF02653 Branched-chain amino acid transport system / permease component BKM78_14595 PF00005 ABC transporter BKM78_14600 PF02653 Branched-chain amino acid transport system / permease component BKM78_14615 PF08240 Alcohol dehydrogenase GroES-like domain BKM78_14615 PF00107 Zinc-binding dehydrogenase BKM78_14625 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BKM78_14625 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BKM78_14635 PF04198 Putative sugar-binding domain BKM78_14640 PF01156 Inosine-uridine preferring nucleoside hydrolase BKM78_14650 PF00528 Binding-protein-dependent transport system inner membrane component BKM78_14660 PF00356 Bacterial regulatory proteins, lacI family BKM78_14665 PF00480 ROK family BKM78_14685 PF00982 Glycosyltransferase family 20 BKM78_14705 PF07726 ATPase family associated with various cellular activities (AAA) BKM78_14705 PF17863 AAA lid domain BKM78_14710 PF01882 Protein of unknown function DUF58 BKM78_14715 PF07584 Aerotolerance regulator N-terminal BKM78_14715 PF00092 von Willebrand factor type A domain BKM78_14720 PF13519 von Willebrand factor type A domain BKM78_14720 PF07584 Aerotolerance regulator N-terminal BKM78_14725 PF01168 Alanine racemase, N-terminal domain BKM78_14730 PF00326 Prolyl oligopeptidase family BKM78_14740 PF00109 Beta-ketoacyl synthase, N-terminal domain BKM78_14740 PF02801 Beta-ketoacyl synthase, C-terminal domain BKM78_14745 PF00550 Phosphopantetheine attachment site BKM78_14750 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BKM78_14750 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BKM78_14755 PF00698 Acyl transferase domain BKM78_14760 PF13556 PucR C-terminal helix-turn-helix domain BKM78_14760 PF17853 GGDEF-like domain BKM78_14765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKM78_14770 PF01235 Sodium:alanine symporter family BKM78_14775 PF14791 DNA polymerase beta thumb BKM78_14775 PF14716 Helix-hairpin-helix domain BKM78_14775 PF02811 PHP domain BKM78_14780 PF00456 Transketolase, thiamine diphosphate binding domain BKM78_14780 PF17831 Pyruvate dehydrogenase E1 component middle domain BKM78_14785 PF11253 Protein of unknown function (DUF3052) BKM78_14790 PF00365 Phosphofructokinase