CN03_00065 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CN03_00105 SM01011 Aminopeptidase P, N-terminal domain CN03_00150 SM01230 CN03_00150 CN03_00160 SM00062 Bacterial periplasmic substrate-binding proteins CN03_00165 SM00919 Malic enzyme, NAD binding domain CN03_00165 SM01274 CN03_00165 CN03_00170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CN03_00170 SM00387 Histidine kinase-like ATPases CN03_00170 SM00388 His Kinase A (phosphoacceptor) domain CN03_00175 SM00448 cheY-homologous receiver domain CN03_00175 SM00862 Transcriptional regulatory protein, C terminal CN03_00200 SM00091 PAS domain CN03_00200 SM00387 Histidine kinase-like ATPases CN03_00200 SM00388 His Kinase A (phosphoacceptor) domain CN03_00200 SM00448 cheY-homologous receiver domain CN03_00215 SM00363 S4 RNA-binding domain CN03_00230 SM00316 Ribosomal protein S1-like RNA-binding domain CN03_00230 SM00732 Likely ribonuclease with RNase H fold. CN03_00255 SM00320 WD40 repeats CN03_00280 SM00849 Metallo-beta-lactamase superfamily CN03_00300 SM00382 ATPases associated with a variety of cellular activities CN03_00370 SM00448 cheY-homologous receiver domain CN03_00370 SM00850 LytTr DNA-binding domain CN03_00395 SM00460 Transglutaminase/protease-like homologues CN03_00405 SM00460 Transglutaminase/protease-like homologues CN03_00430 SM00052 Putative diguanylate phosphodiesterase CN03_00430 SM00267 diguanylate cyclase CN03_00435 SM01116 CN03_00435 CN03_00460 SM00382 ATPases associated with a variety of cellular activities CN03_00505 SM00470 ParB-like nuclease domain CN03_00545 SM00448 cheY-homologous receiver domain CN03_00545 SM00862 Transcriptional regulatory protein, C terminal CN03_00550 SM00387 Histidine kinase-like ATPases CN03_00570 SM00530 Helix-turn-helix XRE-family like proteins CN03_00580 SM01228 CN03_00580 CN03_00615 SM01234 CN03_00615 CN03_00630 SM00382 ATPases associated with a variety of cellular activities CN03_00630 SM00760 Bacterial dnaA protein helix-turn-helix domain CN03_00635 SM00480 DNA polymerase III beta subunit CN03_00645 SM00387 Histidine kinase-like ATPases CN03_00645 SM00433 TopoisomeraseII CN03_00670 SM00563 Phosphate acyltransferases CN03_00680 SM00836 DALR anticodon binding domain CN03_00715 SM00434 DNA Topoisomerase IV CN03_00720 SM00052 Putative diguanylate phosphodiesterase CN03_00720 SM00091 PAS domain CN03_00720 SM00267 diguanylate cyclase CN03_00725 SM00387 Histidine kinase-like ATPases CN03_00725 SM00433 TopoisomeraseII CN03_00775 SM00220 Serine/Threonine protein kinases, catalytic domain CN03_00775 SM00331 Sigma factor PP2C-like phosphatases CN03_00775 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CN03_00800 SM00855 Phosphoglycerate mutase family CN03_00820 SM00382 ATPases associated with a variety of cellular activities CN03_00840 SM00052 Putative diguanylate phosphodiesterase CN03_00935 SM00420 helix_turn_helix, Deoxyribose operon repressor CN03_00935 SM01134 CN03_00935 CN03_00940 SM00267 diguanylate cyclase CN03_00985 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CN03_00985 SM00474 3'-5' exonuclease CN03_00985 SM00475 5'-3' exonuclease CN03_00985 SM00482 DNA polymerase A domain CN03_01010 SM00271 DnaJ molecular chaperone homology domain CN03_01045 SM00388 His Kinase A (phosphoacceptor) domain CN03_01045 SM01079 CN03_01045 CN03_01065 SM00387 Histidine kinase-like ATPases CN03_01065 SM00448 cheY-homologous receiver domain CN03_01140 SM01144 CN03_01140 CN03_01180 SM00257 Lysin motif CN03_01245 SM00448 cheY-homologous receiver domain CN03_01250 SM00387 Histidine kinase-like ATPases CN03_01265 SM00382 ATPases associated with a variety of cellular activities CN03_01265 SM00962 SRP54-type protein, GTPase domain CN03_01265 SM00963 SRP54-type protein, helical bundle domain CN03_01270 SM00382 ATPases associated with a variety of cellular activities CN03_01315 SM00382 ATPases associated with a variety of cellular activities CN03_01330 SM00091 PAS domain CN03_01330 SM00387 Histidine kinase-like ATPases CN03_01330 SM00388 His Kinase A (phosphoacceptor) domain CN03_01335 SM00448 cheY-homologous receiver domain CN03_01335 SM00862 Transcriptional regulatory protein, C terminal CN03_01400 SM00448 cheY-homologous receiver domain CN03_01405 SM00091 PAS domain CN03_01405 SM00387 Histidine kinase-like ATPases CN03_01405 SM00388 His Kinase A (phosphoacceptor) domain CN03_01410 SM00448 cheY-homologous receiver domain CN03_01410 SM00862 Transcriptional regulatory protein, C terminal CN03_01430 SM00411 bacterial (prokaryotic) histone like domain CN03_01460 SM00487 DEAD-like helicases superfamily CN03_01460 SM00490 helicase superfamily c-terminal domain CN03_01485 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CN03_01485 SM00954 Region found in RelA / SpoT proteins CN03_01490 SM01409 CN03_01490 CN03_01495 SM00072 Guanylate kinase homologues. CN03_01555 SM00487 DEAD-like helicases superfamily CN03_01630 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CN03_01630 SM01232 CN03_01630 CN03_01765 SM00052 Putative diguanylate phosphodiesterase CN03_01765 SM00267 diguanylate cyclase CN03_01765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CN03_01765 SM00387 Histidine kinase-like ATPases CN03_01765 SM00388 His Kinase A (phosphoacceptor) domain CN03_01765 SM00448 cheY-homologous receiver domain CN03_01795 SM00382 ATPases associated with a variety of cellular activities CN03_01825 SM00487 DEAD-like helicases superfamily CN03_01825 SM00490 helicase superfamily c-terminal domain CN03_01885 SM00732 Likely ribonuclease with RNase H fold. CN03_01905 SM00448 cheY-homologous receiver domain CN03_01910 SM00448 cheY-homologous receiver domain CN03_01915 SM00260 Two component signalling adaptor domain CN03_01920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CN03_01925 SM00138 Methyltransferase, chemotaxis proteins CN03_01930 SM00073 Histidine Phosphotransfer domain CN03_01930 SM00260 Two component signalling adaptor domain CN03_01930 SM00387 Histidine kinase-like ATPases CN03_01930 SM00448 cheY-homologous receiver domain CN03_01930 SM01231 CN03_01930 CN03_01940 SM00260 Two component signalling adaptor domain CN03_01945 SM00260 Two component signalling adaptor domain CN03_01985 SM00996 S-adenosyl-L-homocysteine hydrolase CN03_01985 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CN03_01995 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CN03_02000 SM00382 ATPases associated with a variety of cellular activities CN03_02010 SM00460 Transglutaminase/protease-like homologues CN03_02020 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CN03_02020 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CN03_02020 SM00493 CN03_02020 CN03_02060 SM00382 ATPases associated with a variety of cellular activities CN03_02080 SM00028 Tetratricopeptide repeats CN03_02085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CN03_02110 SM00859 Semialdehyde dehydrogenase, NAD binding domain CN03_02185 SM00917 LeuA allosteric (dimerisation) domain CN03_02205 SM00448 cheY-homologous receiver domain CN03_02220 SM00836 DALR anticodon binding domain CN03_02220 SM01016 Arginyl tRNA synthetase N terminal dom CN03_02230 SM00487 DEAD-like helicases superfamily CN03_02230 SM00490 helicase superfamily c-terminal domain CN03_02255 SM00478 endonuclease III CN03_02260 SM00052 Putative diguanylate phosphodiesterase CN03_02260 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CN03_02260 SM00091 PAS domain CN03_02260 SM00267 diguanylate cyclase CN03_02295 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CN03_02295 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CN03_02315 SM00849 Metallo-beta-lactamase superfamily CN03_02325 SM00244 prohibitin homologues CN03_02335 SM00240 Forkhead associated domain CN03_02400 SM00382 ATPases associated with a variety of cellular activities CN03_02400 SM01086 C-terminal, D2-small domain, of ClpB protein CN03_02445 SM01321 CN03_02445 CN03_02450 SM00331 Sigma factor PP2C-like phosphatases CN03_02450 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CN03_02460 SM00912 haemagglutination activity domain CN03_02525 SM00841 Elongation factor P, C-terminal CN03_02525 SM01185 CN03_02525 CN03_02575 SM01321 CN03_02575 CN03_02615 SM00845 GatB domain CN03_02650 SM00316 Ribosomal protein S1-like RNA-binding domain CN03_02670 SM00116 Domain in cystathionine beta-synthase and other proteins. CN03_02670 SM00924 MgtE intracellular N domain CN03_02700 SM00382 ATPases associated with a variety of cellular activities CN03_02715 SM00116 Domain in cystathionine beta-synthase and other proteins. CN03_02725 SM00382 ATPases associated with a variety of cellular activities CN03_02770 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CN03_02805 SM01192 CN03_02805 CN03_02805 SM01193 CN03_02805 CN03_02835 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CN03_02850 SM00267 diguanylate cyclase CN03_02890 SM00257 Lysin motif CN03_02900 SM00530 Helix-turn-helix XRE-family like proteins CN03_02960 SM00487 DEAD-like helicases superfamily CN03_03000 SM00382 ATPases associated with a variety of cellular activities CN03_03020 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CN03_03075 SM00421 helix_turn_helix, Lux Regulon CN03_03085 SM01144 CN03_03085 CN03_03110 SM00052 Putative diguanylate phosphodiesterase CN03_03110 SM00091 PAS domain CN03_03110 SM00267 diguanylate cyclase CN03_03125 SM00841 Elongation factor P, C-terminal CN03_03125 SM01185 CN03_03125 CN03_03160 SM00450 Rhodanese Homology Domain CN03_03185 SM00479 CN03_03185 CN03_03205 SM00257 Lysin motif CN03_03205 SM00646 CN03_03205 CN03_03210 SM00853 MutL C terminal dimerisation domain CN03_03210 SM01340 CN03_03210 CN03_03230 SM00244 prohibitin homologues CN03_03235 SM00244 prohibitin homologues CN03_03250 SM00788 Adenylosuccinate synthetase CN03_03270 SM00829 Enoylreductase CN03_03285 SM00460 Transglutaminase/protease-like homologues CN03_03355 SM01007 Class II Aldolase and Adducin N-terminal domain CN03_03395 SM00382 ATPases associated with a variety of cellular activities CN03_03395 SM00448 cheY-homologous receiver domain CN03_03400 SM00387 Histidine kinase-like ATPases CN03_03400 SM00388 His Kinase A (phosphoacceptor) domain CN03_03430 SM00769 Water Stress and Hypersensitive response CN03_03450 SM00382 ATPases associated with a variety of cellular activities CN03_03455 SM00100 Cyclic nucleotide-monophosphate binding domain CN03_03465 SM00486 DNA polymerase type-B family CN03_03495 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CN03_03495 SM00245 tail specific protease CN03_03510 SM00450 Rhodanese Homology Domain CN03_03580 SM00965 Secretin and TonB N terminus short domain CN03_03595 SM00382 ATPases associated with a variety of cellular activities CN03_03650 SM00382 ATPases associated with a variety of cellular activities CN03_03650 SM00448 cheY-homologous receiver domain CN03_03655 SM00091 PAS domain CN03_03655 SM00387 Histidine kinase-like ATPases CN03_03655 SM00388 His Kinase A (phosphoacceptor) domain CN03_03695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CN03_03695 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CN03_03700 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CN03_03765 SM00014 Acid phosphatase homologues CN03_03775 SM00342 helix_turn_helix, arabinose operon control protein CN03_03840 SM00116 Domain in cystathionine beta-synthase and other proteins. CN03_03900 SM00267 diguanylate cyclase CN03_03905 SM00267 diguanylate cyclase CN03_03950 SM00936 Penicillin-binding protein 5, C-terminal domain CN03_03965 SM00729 Elongator protein 3, MiaB family, Radical SAM CN03_03975 SM00448 cheY-homologous receiver domain CN03_04010 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CN03_04030 SM00904 Riboflavin kinase CN03_04090 SM00382 ATPases associated with a variety of cellular activities CN03_04090 SM00448 cheY-homologous receiver domain CN03_04095 SM00387 Histidine kinase-like ATPases CN03_04095 SM00388 His Kinase A (phosphoacceptor) domain CN03_04135 SM00382 ATPases associated with a variety of cellular activities CN03_04140 SM00388 His Kinase A (phosphoacceptor) domain CN03_04140 SM00448 cheY-homologous receiver domain CN03_04145 SM01209 CN03_04145 CN03_04145 SM01210 CN03_04145 CN03_04150 SM00798 AICARFT/IMPCHase bienzyme CN03_04150 SM00851 MGS-like domain CN03_04185 SM00052 Putative diguanylate phosphodiesterase CN03_04185 SM00267 diguanylate cyclase CN03_04210 SM00382 ATPases associated with a variety of cellular activities CN03_04215 SM00267 diguanylate cyclase CN03_04225 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CN03_04270 SM00091 PAS domain CN03_04270 SM00387 Histidine kinase-like ATPases CN03_04270 SM00388 His Kinase A (phosphoacceptor) domain CN03_04295 SM00481 DNA polymerase alpha chain like domain CN03_04370 SM00422 helix_turn_helix, mercury resistance CN03_04460 SM00382 ATPases associated with a variety of cellular activities CN03_04515 SM00342 helix_turn_helix, arabinose operon control protein CN03_04520 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CN03_04555 SM00267 diguanylate cyclase CN03_04560 SM00267 diguanylate cyclase CN03_04565 SM00267 diguanylate cyclase CN03_04600 SM00487 DEAD-like helicases superfamily CN03_04655 SM00271 DnaJ molecular chaperone homology domain CN03_04675 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CN03_04680 SM00851 MGS-like domain CN03_04680 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CN03_04710 SM01103 CN03_04710 CN03_04720 SM00382 ATPases associated with a variety of cellular activities CN03_04755 SM00316 Ribosomal protein S1-like RNA-binding domain CN03_04755 SM00322 K homology RNA-binding domain CN03_04775 SM01387 CN03_04775 CN03_04780 SM00316 Ribosomal protein S1-like RNA-binding domain CN03_04780 SM00322 K homology RNA-binding domain CN03_04810 SM00849 Metallo-beta-lactamase superfamily CN03_04810 SM01027 Beta-Casp domain CN03_04815 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CN03_04820 SM01400 CN03_04820 CN03_04830 SM00849 Metallo-beta-lactamase superfamily CN03_04860 SM00091 PAS domain CN03_04860 SM00267 diguanylate cyclase CN03_04920 SM00052 Putative diguanylate phosphodiesterase CN03_04920 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CN03_04920 SM00091 PAS domain CN03_04920 SM00267 diguanylate cyclase CN03_04930 SM00487 DEAD-like helicases superfamily CN03_04930 SM00490 helicase superfamily c-terminal domain CN03_04935 SM00834 Putative regulatory protein CN03_04945 SM00382 ATPases associated with a variety of cellular activities CN03_04945 SM01086 C-terminal, D2-small domain, of ClpB protein CN03_04955 SM00382 ATPases associated with a variety of cellular activities CN03_04960 SM00382 ATPases associated with a variety of cellular activities CN03_04980 SM00387 Histidine kinase-like ATPases CN03_04980 SM00388 His Kinase A (phosphoacceptor) domain CN03_04980 SM00448 cheY-homologous receiver domain CN03_04985 SM00421 helix_turn_helix, Lux Regulon CN03_04985 SM00448 cheY-homologous receiver domain CN03_05010 SM00342 helix_turn_helix, arabinose operon control protein CN03_05065 SM00990 CN03_05065 CN03_05075 SM00917 LeuA allosteric (dimerisation) domain CN03_05080 SM00344 helix_turn_helix ASNC type CN03_05085 SM00387 Histidine kinase-like ATPases CN03_05115 SM00062 Bacterial periplasmic substrate-binding proteins CN03_05120 SM01211 CN03_05120 CN03_05215 SM00670 Large family of predicted nucleotide-binding domains CN03_05290 SM00849 Metallo-beta-lactamase superfamily CN03_05300 SM00530 Helix-turn-helix XRE-family like proteins CN03_05330 SM00487 DEAD-like helicases superfamily CN03_05365 SM00858 CN03_05365 CN03_05370 SM00260 Two component signalling adaptor domain CN03_05370 SM00448 cheY-homologous receiver domain CN03_05375 SM00138 Methyltransferase, chemotaxis proteins CN03_05425 SM01321 CN03_05425 CN03_05430 SM00047 Lysozyme subfamily 2 CN03_05595 SM00984 UDP binding domain CN03_05600 SM00849 Metallo-beta-lactamase superfamily CN03_05600 SM01027 Beta-Casp domain CN03_05655 SM00937 CN03_05655 CN03_05665 SM00986 Uracil DNA glycosylase superfamily CN03_05665 SM00987 UreE urease accessory protein, C-terminal domain CN03_05680 SM00382 ATPases associated with a variety of cellular activities CN03_05690 SM00387 Histidine kinase-like ATPases CN03_05690 SM00388 His Kinase A (phosphoacceptor) domain CN03_05695 SM00382 ATPases associated with a variety of cellular activities CN03_05695 SM00448 cheY-homologous receiver domain CN03_05720 SM00382 ATPases associated with a variety of cellular activities CN03_05735 SM00448 cheY-homologous receiver domain CN03_05740 SM00073 Histidine Phosphotransfer domain CN03_05740 SM00260 Two component signalling adaptor domain CN03_05740 SM00387 Histidine kinase-like ATPases CN03_05740 SM01231 CN03_05740 CN03_05745 SM00260 Two component signalling adaptor domain CN03_05750 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CN03_05750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CN03_05755 SM00138 Methyltransferase, chemotaxis proteins CN03_05765 SM00448 cheY-homologous receiver domain CN03_05775 SM00331 Sigma factor PP2C-like phosphatases CN03_05775 SM00448 cheY-homologous receiver domain CN03_05840 SM00382 ATPases associated with a variety of cellular activities CN03_05840 SM00962 SRP54-type protein, GTPase domain CN03_05855 SM00448 cheY-homologous receiver domain CN03_05865 SM00073 Histidine Phosphotransfer domain CN03_05865 SM00260 Two component signalling adaptor domain CN03_05865 SM00387 Histidine kinase-like ATPases CN03_05865 SM01231 CN03_05865 CN03_05870 SM00448 cheY-homologous receiver domain CN03_05885 SM00260 Two component signalling adaptor domain CN03_05890 SM00260 Two component signalling adaptor domain CN03_05920 SM00342 helix_turn_helix, arabinose operon control protein CN03_05945 SM00448 cheY-homologous receiver domain CN03_05945 SM00862 Transcriptional regulatory protein, C terminal CN03_05950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CN03_05950 SM00387 Histidine kinase-like ATPases CN03_05950 SM00388 His Kinase A (phosphoacceptor) domain CN03_05960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CN03_05970 SM00267 diguanylate cyclase CN03_06005 SM00829 Enoylreductase CN03_06045 SM00487 DEAD-like helicases superfamily CN03_06045 SM00490 helicase superfamily c-terminal domain CN03_06055 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CN03_06100 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CN03_06110 SM00935 Outer membrane protein (OmpH-like) CN03_06140 SM00563 Phosphate acyltransferases CN03_06150 SM00448 cheY-homologous receiver domain CN03_06160 SM00387 Histidine kinase-like ATPases CN03_06200 SM00796 Allophanate hydrolase subunit 1 CN03_06200 SM00797 Allophanate hydrolase subunit 2 CN03_06200 SM00878 Biotin carboxylase C-terminal domain CN03_06215 SM00062 Bacterial periplasmic substrate-binding proteins CN03_06225 SM00382 ATPases associated with a variety of cellular activities CN03_06235 SM01230 CN03_06235 CN03_06285 SM00363 S4 RNA-binding domain CN03_06310 SM00479 CN03_06310 CN03_06335 SM00530 Helix-turn-helix XRE-family like proteins CN03_06360 SM01321 CN03_06360 CN03_06430 SM00347 helix_turn_helix multiple antibiotic resistance protein CN03_06455 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CN03_06455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CN03_06455 SM01358 CN03_06455 CN03_06465 SM00478 endonuclease III CN03_06465 SM00525 CN03_06465 CN03_06490 SM00387 Histidine kinase-like ATPases CN03_06490 SM00388 His Kinase A (phosphoacceptor) domain CN03_06490 SM00448 cheY-homologous receiver domain CN03_06495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CN03_06495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CN03_06530 SM00382 ATPases associated with a variety of cellular activities CN03_06615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CN03_06615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CN03_06740 SM00287 Bacterial SH3 domain homologues CN03_06755 SM00481 DNA polymerase alpha chain like domain CN03_06785 SM00363 S4 RNA-binding domain CN03_06790 SM00267 diguanylate cyclase CN03_06815 SM00434 DNA Topoisomerase IV CN03_06830 SM00830 Chorismate mutase type II CN03_06850 SM00316 Ribosomal protein S1-like RNA-binding domain CN03_06855 SM00411 bacterial (prokaryotic) histone like domain CN03_06860 SM00028 Tetratricopeptide repeats CN03_06865 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CN03_06885 SM00382 ATPases associated with a variety of cellular activities CN03_06990 SM00487 DEAD-like helicases superfamily CN03_06990 SM00490 helicase superfamily c-terminal domain CN03_07005 SM00267 diguanylate cyclase CN03_07010 SM00342 helix_turn_helix, arabinose operon control protein CN03_07035 SM00421 helix_turn_helix, Lux Regulon CN03_07035 SM00448 cheY-homologous receiver domain CN03_07070 SM00487 DEAD-like helicases superfamily CN03_07105 SM00450 Rhodanese Homology Domain CN03_07115 SM00382 ATPases associated with a variety of cellular activities CN03_07130 SM00342 helix_turn_helix, arabinose operon control protein CN03_07260 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CN03_07285 SM00873 B3/4 domain CN03_07285 SM00874 tRNA synthetase B5 domain CN03_07285 SM00896 Ferredoxin-fold anticodon binding domain CN03_07290 SM00411 bacterial (prokaryotic) histone like domain CN03_07295 SM00422 helix_turn_helix, mercury resistance CN03_07410 SM00382 ATPases associated with a variety of cellular activities CN03_07445 SM01001 AIR carboxylase CN03_07450 SM00387 Histidine kinase-like ATPases CN03_07450 SM00388 His Kinase A (phosphoacceptor) domain CN03_07480 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CN03_07480 SM00245 tail specific protease CN03_07500 SM00382 ATPases associated with a variety of cellular activities CN03_07500 SM01086 C-terminal, D2-small domain, of ClpB protein CN03_07515 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CN03_07520 SM00382 ATPases associated with a variety of cellular activities CN03_07590 SM01130 CN03_07590 CN03_07600 SM00849 Metallo-beta-lactamase superfamily CN03_07675 SM00642 Alpha-amylase domain CN03_07685 SM00090 RIO-like kinase CN03_07710 SM00387 Histidine kinase-like ATPases CN03_07710 SM00388 His Kinase A (phosphoacceptor) domain CN03_07710 SM00448 cheY-homologous receiver domain CN03_07715 SM00342 helix_turn_helix, arabinose operon control protein CN03_07720 SM00091 PAS domain CN03_07720 SM00267 diguanylate cyclase CN03_07730 SM00448 cheY-homologous receiver domain CN03_07775 SM00387 Histidine kinase-like ATPases CN03_07840 SM00487 DEAD-like helicases superfamily CN03_07840 SM00490 helicase superfamily c-terminal domain CN03_07840 SM00982 CN03_07840 CN03_07840 SM01058 CarD-like/TRCF domain CN03_07845 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CN03_07860 SM00900 CN03_07860 CN03_08030 SM00382 ATPases associated with a variety of cellular activities CN03_08035 SM00342 helix_turn_helix, arabinose operon control protein CN03_08050 SM00421 helix_turn_helix, Lux Regulon CN03_08060 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CN03_08065 SM00226 Low molecular weight phosphatase family CN03_08100 SM00487 DEAD-like helicases superfamily CN03_08100 SM00490 helicase superfamily c-terminal domain CN03_08105 SM01322 CN03_08105 CN03_08110 SM00530 Helix-turn-helix XRE-family like proteins CN03_08125 SM00052 Putative diguanylate phosphodiesterase CN03_08125 SM00267 diguanylate cyclase CN03_08140 SM00342 helix_turn_helix, arabinose operon control protein CN03_08170 SM00155 Phospholipase D. Active site motifs. CN03_08185 SM00267 diguanylate cyclase CN03_08190 SM00867 YceI-like domain CN03_08205 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CN03_08210 SM00849 Metallo-beta-lactamase superfamily CN03_08265 SM00271 DnaJ molecular chaperone homology domain CN03_08295 SM00100 Cyclic nucleotide-monophosphate binding domain CN03_08295 SM00419 helix_turn_helix, cAMP Regulatory protein CN03_08375 SM00825 Beta-ketoacyl synthase CN03_08380 SM00342 helix_turn_helix, arabinose operon control protein CN03_08385 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CN03_08385 SM00091 PAS domain CN03_08385 SM00387 Histidine kinase-like ATPases CN03_08390 SM00052 Putative diguanylate phosphodiesterase CN03_08390 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CN03_08390 SM00091 PAS domain CN03_08390 SM00267 diguanylate cyclase CN03_08390 SM00448 cheY-homologous receiver domain CN03_08400 SM00729 Elongator protein 3, MiaB family, Radical SAM CN03_08405 SM00267 diguanylate cyclase CN03_08405 SM00448 cheY-homologous receiver domain CN03_08410 SM00073 Histidine Phosphotransfer domain CN03_08410 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CN03_08410 SM00091 PAS domain CN03_08410 SM00387 Histidine kinase-like ATPases CN03_08410 SM00388 His Kinase A (phosphoacceptor) domain CN03_08410 SM00448 cheY-homologous receiver domain CN03_08450 SM00849 Metallo-beta-lactamase superfamily CN03_08460 SM00822 CN03_08460 CN03_08485 SM00563 Phosphate acyltransferases CN03_08530 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CN03_08560 SM00347 helix_turn_helix multiple antibiotic resistance protein CN03_08595 SM00382 ATPases associated with a variety of cellular activities CN03_08610 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CN03_08645 SM00448 cheY-homologous receiver domain CN03_08645 SM00862 Transcriptional regulatory protein, C terminal CN03_08650 SM00387 Histidine kinase-like ATPases CN03_08650 SM00388 His Kinase A (phosphoacceptor) domain CN03_08710 SM00448 cheY-homologous receiver domain CN03_08725 SM00342 helix_turn_helix, arabinose operon control protein CN03_08740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CN03_08785 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CN03_08830 SM00382 ATPases associated with a variety of cellular activities CN03_08840 SM00487 DEAD-like helicases superfamily CN03_08840 SM00491 CN03_08840 CN03_08860 SM00382 ATPases associated with a variety of cellular activities CN03_08870 SM00849 Metallo-beta-lactamase superfamily CN03_08885 SM00382 ATPases associated with a variety of cellular activities CN03_08900 SM00226 Low molecular weight phosphatase family CN03_08925 SM00840 CN03_08925 CN03_08960 SM01321 CN03_08960 CN03_08995 SM00474 3'-5' exonuclease CN03_09005 SM00460 Transglutaminase/protease-like homologues CN03_09045 SM00382 ATPases associated with a variety of cellular activities CN03_09045 SM00994 ClpX C4-type zinc finger CN03_09045 SM01086 C-terminal, D2-small domain, of ClpB protein CN03_09050 SM00382 ATPases associated with a variety of cellular activities CN03_09050 SM00464 Found in ATP-dependent protease La (LON) CN03_09055 SM00411 bacterial (prokaryotic) histone like domain CN03_09080 SM00257 Lysin motif CN03_09095 SM00479 CN03_09095 CN03_09125 SM00829 Enoylreductase CN03_09155 SM01018 B12 binding domain CN03_09170 SM00331 Sigma factor PP2C-like phosphatases CN03_09170 SM00448 cheY-homologous receiver domain CN03_09190 SM00855 Phosphoglycerate mutase family CN03_09245 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CN03_09280 SM00450 Rhodanese Homology Domain CN03_09315 SM00357 Cold shock protein domain CN03_09325 SM00382 ATPases associated with a variety of cellular activities CN03_09325 SM01086 C-terminal, D2-small domain, of ClpB protein CN03_09330 SM00316 Ribosomal protein S1-like RNA-binding domain CN03_09345 SM00843 CN03_09345 CN03_09355 SM00382 ATPases associated with a variety of cellular activities CN03_09415 SM00881 CoA binding domain CN03_09420 SM00421 helix_turn_helix, Lux Regulon CN03_09420 SM00448 cheY-homologous receiver domain CN03_09425 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CN03_09425 SM00465 GIY-YIG type nucleases (URI domain) CN03_09450 SM00729 Elongator protein 3, MiaB family, Radical SAM CN03_09470 SM00893 Electron transfer flavoprotein domain CN03_09475 SM00893 Electron transfer flavoprotein domain CN03_09480 SM00984 UDP binding domain CN03_09485 SM00382 ATPases associated with a variety of cellular activities CN03_09535 SM00487 DEAD-like helicases superfamily CN03_09535 SM00490 helicase superfamily c-terminal domain CN03_09630 SM00938 Nitrogen regulatory protein P-II CN03_09645 SM00422 helix_turn_helix, mercury resistance CN03_09680 SM00448 cheY-homologous receiver domain CN03_09680 SM00862 Transcriptional regulatory protein, C terminal CN03_09685 SM00387 Histidine kinase-like ATPases CN03_09685 SM00388 His Kinase A (phosphoacceptor) domain CN03_09735 SM00530 Helix-turn-helix XRE-family like proteins CN03_09780 SM00822 CN03_09780 CN03_09800 SM00822 CN03_09800 CN03_09805 SM00981 CN03_09805 CN03_09845 SM00028 Tetratricopeptide repeats CN03_09875 SM01264 CN03_09875 CN03_09900 SM00248 ankyrin repeats CN03_09945 SM00822 CN03_09945 CN03_09950 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CN03_09980 SM00363 S4 RNA-binding domain CN03_09985 SM00316 Ribosomal protein S1-like RNA-binding domain CN03_09995 SM00267 diguanylate cyclase CN03_10020 SM00345 helix_turn_helix gluconate operon transcriptional repressor CN03_10020 SM00895 CN03_10020 CN03_10145 SM00382 ATPases associated with a variety of cellular activities CN03_10145 SM00487 DEAD-like helicases superfamily CN03_10145 SM00490 helicase superfamily c-terminal domain CN03_10145 SM00847 Helicase associated domain (HA2) Add an annotation CN03_10185 SM00028 Tetratricopeptide repeats CN03_10190 SM00028 Tetratricopeptide repeats CN03_10225 SM00382 ATPases associated with a variety of cellular activities CN03_10230 SM00327 von Willebrand factor (vWF) type A domain CN03_10255 SM00474 3'-5' exonuclease CN03_10270 SM00382 ATPases associated with a variety of cellular activities CN03_10290 SM00387 Histidine kinase-like ATPases CN03_10290 SM00388 His Kinase A (phosphoacceptor) domain CN03_10290 SM00448 cheY-homologous receiver domain CN03_10325 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CN03_10325 SM00475 5'-3' exonuclease CN03_10330 SM00382 ATPases associated with a variety of cellular activities CN03_10335 SM00631 CN03_10335 CN03_10355 SM00487 DEAD-like helicases superfamily CN03_10355 SM00490 helicase superfamily c-terminal domain CN03_10400 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CN03_10400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CN03_10435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CN03_10435 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CN03_10435 SM01049 CN03_10435 CN03_10450 SM00460 Transglutaminase/protease-like homologues CN03_10505 SM00342 helix_turn_helix, arabinose operon control protein CN03_10525 SM00859 Semialdehyde dehydrogenase, NAD binding domain CN03_10530 SM01329 CN03_10530 CN03_10680 SM00881 CoA binding domain CN03_10700 SM00861 Transketolase, pyrimidine binding domain CN03_10740 SM00260 Two component signalling adaptor domain CN03_10740 SM00448 cheY-homologous receiver domain CN03_10745 SM00052 Putative diguanylate phosphodiesterase CN03_10755 SM00342 helix_turn_helix, arabinose operon control protein CN03_10780 SM00014 Acid phosphatase homologues CN03_10785 SM00825 Beta-ketoacyl synthase CN03_10790 SM00878 Biotin carboxylase C-terminal domain CN03_10860 SM01230 CN03_10860 CN03_10865 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CN03_10865 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CN03_10905 SM00448 cheY-homologous receiver domain CN03_10905 SM01012 CN03_10905 CN03_10925 SM00382 ATPases associated with a variety of cellular activities CN03_10945 SM00220 Serine/Threonine protein kinases, catalytic domain CN03_10945 SM00331 Sigma factor PP2C-like phosphatases CN03_10945 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CN03_10965 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CN03_11060 SM00267 diguanylate cyclase CN03_11080 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CN03_11080 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CN03_11095 SM00421 helix_turn_helix, Lux Regulon CN03_11150 SM00387 Histidine kinase-like ATPases CN03_11150 SM00388 His Kinase A (phosphoacceptor) domain CN03_11175 SM00382 ATPases associated with a variety of cellular activities CN03_11195 SM00831 Cation transporter/ATPase, N-terminus CN03_11220 SM00900 CN03_11220 CN03_11235 SM00450 Rhodanese Homology Domain CN03_11280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CN03_11280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CN03_11350 SM00363 S4 RNA-binding domain CN03_11370 SM00422 helix_turn_helix, mercury resistance CN03_11445 SM00387 Histidine kinase-like ATPases CN03_11530 SM00530 Helix-turn-helix XRE-family like proteins CN03_11555 SM00387 Histidine kinase-like ATPases CN03_11655 SM01323 CN03_11655 CN03_11685 SM00267 diguanylate cyclase CN03_11815 SM00116 Domain in cystathionine beta-synthase and other proteins. CN03_11815 SM01240 CN03_11815 CN03_11865 SM00487 DEAD-like helicases superfamily CN03_11865 SM00490 helicase superfamily c-terminal domain CN03_11890 SM00382 ATPases associated with a variety of cellular activities CN03_11935 SM00479 CN03_11935 CN03_11970 SM00822 CN03_11970 CN03_11975 SM00116 Domain in cystathionine beta-synthase and other proteins. CN03_12020 SM00487 DEAD-like helicases superfamily CN03_12020 SM00490 helicase superfamily c-terminal domain CN03_12020 SM00847 Helicase associated domain (HA2) Add an annotation CN03_12080 SM00736 Dystroglycan-type cadherin-like domains. CN03_12125 SM00704 CDGSH-type zinc finger. Function unknown. CN03_12160 SM00981 CN03_12160 CN03_12205 SM00327 von Willebrand factor (vWF) type A domain CN03_12210 SM00028 Tetratricopeptide repeats CN03_12210 SM00327 von Willebrand factor (vWF) type A domain CN03_12260 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CN03_12260 SM00292 breast cancer carboxy-terminal domain CN03_12260 SM00532 Ligase N family CN03_12265 SM00771 ZipA, C-terminal domain (FtsZ-binding) CN03_12270 SM00968 SMC proteins Flexible Hinge Domain CN03_12275 SM00345 helix_turn_helix gluconate operon transcriptional repressor CN03_12335 SM00342 helix_turn_helix, arabinose operon control protein CN03_12340 SM00822 CN03_12340 CN03_12405 SM01321 CN03_12405 CN03_12475 SM00382 ATPases associated with a variety of cellular activities CN03_12520 SM00342 helix_turn_helix, arabinose operon control protein CN03_12590 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CN03_12590 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CN03_12590 SM00493 CN03_12590 CN03_12595 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CN03_12620 SM00342 helix_turn_helix, arabinose operon control protein CN03_12640 SM00342 helix_turn_helix, arabinose operon control protein CN03_12680 SM01091 Transporter associated domain CN03_12685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CN03_12735 SM00052 Putative diguanylate phosphodiesterase CN03_12735 SM00267 diguanylate cyclase CN03_12735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CN03_12745 SM00479 CN03_12745 CN03_12750 SM00100 Cyclic nucleotide-monophosphate binding domain CN03_12750 SM00116 Domain in cystathionine beta-synthase and other proteins. CN03_12765 SM00387 Histidine kinase-like ATPases CN03_12765 SM00388 His Kinase A (phosphoacceptor) domain CN03_12765 SM00448 cheY-homologous receiver domain CN03_12770 SM00421 helix_turn_helix, Lux Regulon CN03_12770 SM00448 cheY-homologous receiver domain CN03_12855 SM00382 ATPases associated with a variety of cellular activities CN03_12875 SM00870 CN03_12875 CN03_12885 SM00729 Elongator protein 3, MiaB family, Radical SAM CN03_12915 SM00267 diguanylate cyclase CN03_12920 SM00047 Lysozyme subfamily 2 CN03_12940 SM00563 Phosphate acyltransferases CN03_12945 SM00267 diguanylate cyclase CN03_12970 SM00448 cheY-homologous receiver domain CN03_12995 SM00387 Histidine kinase-like ATPases CN03_12995 SM00388 His Kinase A (phosphoacceptor) domain CN03_12995 SM00448 cheY-homologous receiver domain CN03_13005 SM00448 cheY-homologous receiver domain CN03_13020 SM00342 helix_turn_helix, arabinose operon control protein CN03_13050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CN03_13050 SM00387 Histidine kinase-like ATPases CN03_13110 SM00342 helix_turn_helix, arabinose operon control protein CN03_13160 SM00357 Cold shock protein domain CN03_13160 SM00955 CN03_13160 CN03_13170 SM00899 CN03_13170 CN03_13180 SM00903 Flavin reductase like domain CN03_13195 SM00357 Cold shock protein domain CN03_13300 SM00255 Toll - interleukin 1 - resistance CN03_13315 SM00487 DEAD-like helicases superfamily CN03_13335 SM00382 ATPases associated with a variety of cellular activities CN03_13335 SM00962 SRP54-type protein, GTPase domain CN03_13335 SM00963 SRP54-type protein, helical bundle domain CN03_13345 SM00116 Domain in cystathionine beta-synthase and other proteins. CN03_13345 SM01091 Transporter associated domain CN03_13375 SM00988 UreE urease accessory protein, N-terminal domain CN03_13395 SM00841 Elongation factor P, C-terminal CN03_13395 SM01185 CN03_13395 CN03_13405 SM00978 CN03_13405 CN03_13415 SM00342 helix_turn_helix, arabinose operon control protein CN03_13435 SM00564 beta-propeller repeat CN03_13455 SM00028 Tetratricopeptide repeats CN03_13465 SM00562 CN03_13465 CN03_13495 SM00357 Cold shock protein domain CN03_13505 SM00563 Phosphate acyltransferases CN03_13525 SM00384 DNA binding domain with preference for A/T rich regions CN03_13545 SM00954 Region found in RelA / SpoT proteins CN03_13560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CN03_13560 SM00387 Histidine kinase-like ATPases CN03_13560 SM00388 His Kinase A (phosphoacceptor) domain CN03_13560 SM00448 cheY-homologous receiver domain CN03_13585 SM00358 Double-stranded RNA binding motif CN03_13585 SM00535 Ribonuclease III family CN03_13595 SM00838 Elongation factor G C-terminus CN03_13600 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CN03_13675 SM00028 Tetratricopeptide repeats CN03_13750 SM00782 PhnA Zinc-Ribbon CN03_13760 SM00342 helix_turn_helix, arabinose operon control protein CN03_13780 SM00382 ATPases associated with a variety of cellular activities CN03_13820 SM00460 Transglutaminase/protease-like homologues CN03_13865 SM00347 helix_turn_helix multiple antibiotic resistance protein CN03_13940 SM00937 CN03_13940 CN03_13950 SM00028 Tetratricopeptide repeats CN03_13970 SM01400 CN03_13970 CN03_14015 SM00729 Elongator protein 3, MiaB family, Radical SAM CN03_14030 SM00116 Domain in cystathionine beta-synthase and other proteins. CN03_14030 SM01091 Transporter associated domain CN03_14040 SM00345 helix_turn_helix gluconate operon transcriptional repressor CN03_14060 SM00957 SecA DEAD-like domain CN03_14060 SM00958 SecA preprotein cross-linking domain CN03_14075 SM00864 Tubulin/FtsZ family, GTPase domain CN03_14075 SM00865 Tubulin/FtsZ family, C-terminal domain CN03_14080 SM00842 Cell division protein FtsA CN03_14175 SM01321 CN03_14175 CN03_14180 SM01321 CN03_14180 CN03_14215 SM00100 Cyclic nucleotide-monophosphate binding domain CN03_14235 SM00342 helix_turn_helix, arabinose operon control protein CN03_14255 SM00052 Putative diguanylate phosphodiesterase CN03_14255 SM00267 diguanylate cyclase CN03_14260 SM00052 Putative diguanylate phosphodiesterase CN03_14260 SM00267 diguanylate cyclase CN03_14280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CN03_14280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CN03_14295 SM00642 Alpha-amylase domain CN03_14305 SM00316 Ribosomal protein S1-like RNA-binding domain CN03_14330 SM00382 ATPases associated with a variety of cellular activities CN03_14335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CN03_14335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CN03_14345 SM00100 Cyclic nucleotide-monophosphate binding domain CN03_14370 SM00977 TilS substrate C-terminal domain CN03_14375 SM00481 DNA polymerase alpha chain like domain CN03_14410 SM00487 DEAD-like helicases superfamily CN03_14410 SM00490 helicase superfamily c-terminal domain CN03_14475 SM00883 Chaperonin 10 Kd subunit CN03_14505 SM00244 prohibitin homologues CN03_14530 SM00422 helix_turn_helix, mercury resistance CN03_14535 SM00822 CN03_14535 CN03_14550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CN03_14550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CN03_14590 SM00855 Phosphoglycerate mutase family CN03_14620 SM00644 CN03_14620 CN03_14670 SM00421 helix_turn_helix, Lux Regulon CN03_14680 SM00900 CN03_14680 CN03_14715 SM00267 diguanylate cyclase CN03_14765 SM00387 Histidine kinase-like ATPases CN03_14765 SM00388 His Kinase A (phosphoacceptor) domain CN03_14765 SM00448 cheY-homologous receiver domain CN03_14795 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CN03_14800 SM00422 helix_turn_helix, mercury resistance CN03_14825 SM00100 Cyclic nucleotide-monophosphate binding domain CN03_14825 SM00419 helix_turn_helix, cAMP Regulatory protein CN03_14890 SM00729 Elongator protein 3, MiaB family, Radical SAM CN03_14890 SM00876 Biotin and Thiamin Synthesis associated domain CN03_14940 SM00116 Domain in cystathionine beta-synthase and other proteins. CN03_14955 SM00098 Alkaline phosphatase homologues CN03_14960 SM00098 Alkaline phosphatase homologues CN03_15010 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CN03_15035 SM00271 DnaJ molecular chaperone homology domain CN03_15065 SM00650 Ribosomal RNA adenine dimethylases CN03_15080 SM00450 Rhodanese Homology Domain CN03_15085 SM00763 PrkA AAA domain CN03_15120 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CN03_15130 SM00905 Dihydroneopterin aldolase CN03_15150 SM00400 zinc finger CN03_15150 SM00493 CN03_15150 CN03_15265 SM00448 cheY-homologous receiver domain CN03_15265 SM00862 Transcriptional regulatory protein, C terminal CN03_15275 SM00342 helix_turn_helix, arabinose operon control protein CN03_15295 SM00938 Nitrogen regulatory protein P-II CN03_15330 SM00422 helix_turn_helix, mercury resistance CN03_15360 SM00422 helix_turn_helix, mercury resistance CN03_15390 SM00382 ATPases associated with a variety of cellular activities CN03_15400 SM00530 Helix-turn-helix XRE-family like proteins CN03_15405 SM00487 DEAD-like helicases superfamily CN03_15405 SM00490 helicase superfamily c-terminal domain CN03_15430 SM00729 Elongator protein 3, MiaB family, Radical SAM CN03_15475 SM00267 diguanylate cyclase CN03_15480 SM00342 helix_turn_helix, arabinose operon control protein CN03_15535 SM00342 helix_turn_helix, arabinose operon control protein CN03_15540 SM00267 diguanylate cyclase CN03_15560 SM01007 Class II Aldolase and Adducin N-terminal domain CN03_15590 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CN03_15620 SM00342 helix_turn_helix, arabinose operon control protein CN03_15630 SM00382 ATPases associated with a variety of cellular activities CN03_15660 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CN03_15660 SM00534 ATPase domain of DNA mismatch repair MUTS family CN03_15670 SM00852 Probable molybdopterin binding domain CN03_15685 SM00382 ATPases associated with a variety of cellular activities CN03_15690 SM00052 Putative diguanylate phosphodiesterase CN03_15690 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CN03_15690 SM00091 PAS domain CN03_15690 SM00267 diguanylate cyclase CN03_15810 SM00967 RNA 2'-O ribose methyltransferase substrate binding CN03_15815 SM00861 Transketolase, pyrimidine binding domain CN03_15865 SM00947 Carbonic anhydrase CN03_15875 SM00878 Biotin carboxylase C-terminal domain CN03_15940 SM00347 helix_turn_helix multiple antibiotic resistance protein CN03_15955 SM00052 Putative diguanylate phosphodiesterase CN03_15990 SM00967 RNA 2'-O ribose methyltransferase substrate binding CN03_15995 SM00316 Ribosomal protein S1-like RNA-binding domain CN03_15995 SM00357 Cold shock protein domain CN03_15995 SM00955 CN03_15995 CN03_16005 SM00382 ATPases associated with a variety of cellular activities CN03_16005 SM01086 C-terminal, D2-small domain, of ClpB protein CN03_16030 SM00849 Metallo-beta-lactamase superfamily CN03_16045 SM00487 DEAD-like helicases superfamily CN03_16045 SM00490 helicase superfamily c-terminal domain CN03_16065 SM00448 cheY-homologous receiver domain CN03_16070 SM00387 Histidine kinase-like ATPases CN03_16075 SM00861 Transketolase, pyrimidine binding domain CN03_16115 SM00382 ATPases associated with a variety of cellular activities CN03_16185 SM00965 Secretin and TonB N terminus short domain CN03_16205 SM00842 Cell division protein FtsA CN03_16225 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CN03_16230 SM00382 ATPases associated with a variety of cellular activities CN03_16240 SM00267 diguanylate cyclase CN03_16240 SM00448 cheY-homologous receiver domain CN03_16285 SM00267 diguanylate cyclase CN03_16345 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CN03_16360 SM00342 helix_turn_helix, arabinose operon control protein CN03_16395 SM00095 Transthyretin CN03_16415 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CN03_16420 SM01092 CO dehydrogenase flavoprotein C-terminal domain CN03_16425 SM00382 ATPases associated with a variety of cellular activities CN03_16480 SM00028 Tetratricopeptide repeats CN03_16510 SM00829 Enoylreductase CN03_16530 SM01005 Alanine racemase, C-terminal domain CN03_16670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CN03_16670 SM00387 Histidine kinase-like ATPases CN03_16670 SM00388 His Kinase A (phosphoacceptor) domain CN03_16675 SM00448 cheY-homologous receiver domain CN03_16675 SM00862 Transcriptional regulatory protein, C terminal CN03_16685 SM00116 Domain in cystathionine beta-synthase and other proteins. CN03_16765 SM00382 ATPases associated with a variety of cellular activities CN03_16855 SM00530 Helix-turn-helix XRE-family like proteins CN03_16895 SM00867 YceI-like domain CN03_16925 SM00450 Rhodanese Homology Domain CN03_16955 SM00052 Putative diguanylate phosphodiesterase CN03_16955 SM00267 diguanylate cyclase CN03_16990 SM00662 RNA polymerases D CN03_16995 SM00363 S4 RNA-binding domain CN03_16995 SM01390 CN03_16995 CN03_17060 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CN03_17065 SM01374 CN03_17065 CN03_17085 SM00322 K homology RNA-binding domain CN03_17100 SM01382 CN03_17100 CN03_17100 SM01383 CN03_17100 CN03_17120 SM01403 CN03_17120 CN03_17130 SM00838 Elongation factor G C-terminus CN03_17130 SM00889 Elongation factor G, domain IV CN03_17145 SM00663 RNA polymerase I subunit A N-terminus CN03_17170 SM00649 Ribosomal protein L11/L12 CN03_17175 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CN03_17175 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CN03_17195 SM00838 Elongation factor G C-terminus CN03_17195 SM00889 Elongation factor G, domain IV CN03_17240 SM01359 CN03_17240 CN03_17240 SM01360 CN03_17240 CN03_17310 SM00052 Putative diguanylate phosphodiesterase CN03_17310 SM00267 diguanylate cyclase CN03_17390 SM00382 ATPases associated with a variety of cellular activities CN03_17405 SM00822 CN03_17405 CN03_17460 SM00487 DEAD-like helicases superfamily CN03_17465 SM00530 Helix-turn-helix XRE-family like proteins CN03_17485 SM00530 Helix-turn-helix XRE-family like proteins CN03_17520 SM00248 ankyrin repeats CN03_17540 SM00530 Helix-turn-helix XRE-family like proteins CN03_17590 SM00829 Enoylreductase CN03_17680 SM00729 Elongator protein 3, MiaB family, Radical SAM CN03_17690 SM00852 Probable molybdopterin binding domain CN03_17710 SM00382 ATPases associated with a variety of cellular activities CN03_17715 SM00382 ATPases associated with a variety of cellular activities CN03_17735 SM01152 CN03_17735 CN03_17765 SM00729 Elongator protein 3, MiaB family, Radical SAM CN03_17775 SM00028 Tetratricopeptide repeats CN03_17800 SM00347 helix_turn_helix multiple antibiotic resistance protein CN03_17850 SM00463 Small MutS-related domain CN03_17855 SM00563 Phosphate acyltransferases CN03_17875 SM01004 Delta-aminolevulinic acid dehydratase CN03_17895 SM00357 Cold shock protein domain CN03_17895 SM00382 ATPases associated with a variety of cellular activities CN03_17895 SM00959 Rho termination factor, N-terminal domain CN03_17920 SM00938 Nitrogen regulatory protein P-II CN03_17935 SM00382 ATPases associated with a variety of cellular activities CN03_17960 SM00345 helix_turn_helix gluconate operon transcriptional repressor CN03_17960 SM00895 CN03_17960 CN03_17980 SM00382 ATPases associated with a variety of cellular activities CN03_17985 SM01118 CN03_17985