TOL_0001 SM00382 ATPases associated with a variety of cellular activities TOL_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain TOL_0002 SM00480 DNA polymerase III beta subunit TOL_0027 SM00052 Putative diguanylate phosphodiesterase TOL_0027 SM00091 PAS domain TOL_0027 SM00267 diguanylate cyclase TOL_0046 SM00855 Phosphoglycerate mutase family TOL_0073 SM00420 helix_turn_helix, Deoxyribose operon repressor TOL_0073 SM01134 TOL_0073 TOL_0136 SM00382 ATPases associated with a variety of cellular activities TOL_0136 SM00962 SRP54-type protein, GTPase domain TOL_0136 SM00963 SRP54-type protein, helical bundle domain TOL_0137 SM00382 ATPases associated with a variety of cellular activities TOL_0147 SM00382 ATPases associated with a variety of cellular activities TOL_0151 SM00448 cheY-homologous receiver domain TOL_0151 SM00862 Transcriptional regulatory protein, C terminal TOL_0157 SM00448 cheY-homologous receiver domain TOL_0158 SM00091 PAS domain TOL_0158 SM00387 Histidine kinase-like ATPases TOL_0158 SM00388 His Kinase A (phosphoacceptor) domain TOL_0164 SM00411 bacterial (prokaryotic) histone like domain TOL_0170 SM00487 DEAD-like helicases superfamily TOL_0170 SM00490 helicase superfamily c-terminal domain TOL_0175 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TOL_0175 SM00954 Region found in RelA / SpoT proteins TOL_0176 SM01409 TOL_0176 TOL_0177 SM00072 Guanylate kinase homologues. TOL_0192 SM00220 Serine/Threonine protein kinases, catalytic domain TOL_0242 SM00052 Putative diguanylate phosphodiesterase TOL_0242 SM00267 diguanylate cyclase TOL_0242 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TOL_0242 SM00387 Histidine kinase-like ATPases TOL_0242 SM00388 His Kinase A (phosphoacceptor) domain TOL_0242 SM00448 cheY-homologous receiver domain TOL_0267 SM00732 Likely ribonuclease with RNase H fold. TOL_0272 SM00448 cheY-homologous receiver domain TOL_0273 SM00260 Two component signalling adaptor domain TOL_0274 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TOL_0275 SM00138 Methyltransferase, chemotaxis proteins TOL_0276 SM00073 Histidine Phosphotransfer domain TOL_0276 SM00260 Two component signalling adaptor domain TOL_0276 SM00387 Histidine kinase-like ATPases TOL_0276 SM00448 cheY-homologous receiver domain TOL_0276 SM01231 TOL_0276 TOL_0328 SM00917 LeuA allosteric (dimerisation) domain TOL_0332 SM00448 cheY-homologous receiver domain TOL_0338 SM00487 DEAD-like helicases superfamily TOL_0338 SM00490 helicase superfamily c-terminal domain TOL_0351 SM00478 endonuclease III TOL_0362 SM00849 Metallo-beta-lactamase superfamily TOL_0364 SM00244 prohibitin homologues TOL_0393 SM00912 haemagglutination activity domain TOL_0512 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TOL_0530 SM00267 diguanylate cyclase TOL_0540 SM00422 helix_turn_helix, mercury resistance TOL_0551 SM00938 Nitrogen regulatory protein P-II TOL_0555 SM00342 helix_turn_helix, arabinose operon control protein TOL_0556 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TOL_0556 SM00387 Histidine kinase-like ATPases TOL_0556 SM00388 His Kinase A (phosphoacceptor) domain TOL_0584 SM00905 Dihydroneopterin aldolase TOL_0598 SM00650 Ribosomal RNA adenine dimethylases TOL_0609 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TOL_0622 SM00028 Tetratricopeptide repeats TOL_0666 SM00387 Histidine kinase-like ATPases TOL_0666 SM00388 His Kinase A (phosphoacceptor) domain TOL_0666 SM00448 cheY-homologous receiver domain TOL_0683 SM00900 TOL_0683 TOL_0701 SM00855 Phosphoglycerate mutase family TOL_0788 SM00387 Histidine kinase-like ATPases TOL_0788 SM00388 His Kinase A (phosphoacceptor) domain TOL_0789 SM00448 cheY-homologous receiver domain TOL_0789 SM00862 Transcriptional regulatory protein, C terminal TOL_0806 SM00842 Cell division protein FtsA TOL_0807 SM00864 Tubulin/FtsZ family, GTPase domain TOL_0807 SM00865 Tubulin/FtsZ family, C-terminal domain TOL_0810 SM00957 SecA DEAD-like domain TOL_0810 SM00958 SecA preprotein cross-linking domain TOL_0816 SM00116 Domain in cystathionine beta-synthase and other proteins. TOL_0816 SM01091 Transporter associated domain TOL_0835 SM00937 TOL_0835 TOL_0873 SM00460 Transglutaminase/protease-like homologues TOL_0918 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TOL_0921 SM00358 Double-stranded RNA binding motif TOL_0921 SM00535 Ribonuclease III family TOL_0929 SM00954 Region found in RelA / SpoT proteins TOL_0950 SM00028 Tetratricopeptide repeats TOL_0966 SM00988 UreE urease accessory protein, N-terminal domain TOL_0978 SM00487 DEAD-like helicases superfamily TOL_1097 SM00100 Cyclic nucleotide-monophosphate binding domain TOL_1097 SM00116 Domain in cystathionine beta-synthase and other proteins. TOL_1098 SM00479 TOL_1098 TOL_1100 SM00052 Putative diguanylate phosphodiesterase TOL_1100 SM00267 diguanylate cyclase TOL_1100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TOL_1145 SM00342 helix_turn_helix, arabinose operon control protein TOL_1187 SM00028 Tetratricopeptide repeats TOL_1187 SM00327 von Willebrand factor (vWF) type A domain TOL_1188 SM00327 von Willebrand factor (vWF) type A domain TOL_1247 SM00479 TOL_1247 TOL_1255 SM00487 DEAD-like helicases superfamily TOL_1255 SM00490 helicase superfamily c-terminal domain TOL_1393 SM00369 Leucine-rich repeats, typical (most populated) subfamily TOL_1399 SM00900 TOL_1399 TOL_1408 SM00382 ATPases associated with a variety of cellular activities TOL_1427 SM01002 Alanine dehydrogenase/PNT, C-terminal domain TOL_1427 SM01003 Alanine dehydrogenase/PNT, N-terminal domain TOL_1454 SM00382 ATPases associated with a variety of cellular activities TOL_1567 SM00487 DEAD-like helicases superfamily TOL_1567 SM00490 helicase superfamily c-terminal domain TOL_1573 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TOL_1573 SM00475 5'-3' exonuclease TOL_1588 SM00474 3'-5' exonuclease TOL_1601 SM00028 Tetratricopeptide repeats TOL_1602 SM00028 Tetratricopeptide repeats TOL_1648 SM00822 TOL_1648 TOL_1657 SM00248 ankyrin repeats TOL_1668 SM00028 Tetratricopeptide repeats TOL_1677 SM00822 TOL_1677 TOL_1709 SM00387 Histidine kinase-like ATPases TOL_1709 SM00388 His Kinase A (phosphoacceptor) domain TOL_1724 SM00938 Nitrogen regulatory protein P-II TOL_1737 SM00450 Rhodanese Homology Domain TOL_1744 SM00226 Low molecular weight phosphatase family TOL_1763 SM00382 ATPases associated with a variety of cellular activities TOL_1770 SM00729 Elongator protein 3, MiaB family, Radical SAM TOL_1775 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TOL_1775 SM00465 GIY-YIG type nucleases (URI domain) TOL_1776 SM00421 helix_turn_helix, Lux Regulon TOL_1776 SM00448 cheY-homologous receiver domain TOL_1789 SM00382 ATPases associated with a variety of cellular activities TOL_1823 SM00855 Phosphoglycerate mutase family TOL_1827 SM00331 Sigma factor PP2C-like phosphatases TOL_1827 SM00448 cheY-homologous receiver domain TOL_1836 SM00829 Enoylreductase TOL_1845 SM00257 Lysin motif TOL_1850 SM00411 bacterial (prokaryotic) histone like domain TOL_1875 SM00226 Low molecular weight phosphatase family TOL_1878 SM00382 ATPases associated with a variety of cellular activities TOL_1929 SM00387 Histidine kinase-like ATPases TOL_1929 SM00388 His Kinase A (phosphoacceptor) domain TOL_1948 SM00347 helix_turn_helix multiple antibiotic resistance protein TOL_1954 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TOL_1967 SM00563 Phosphate acyltransferases TOL_1987 SM00052 Putative diguanylate phosphodiesterase TOL_1987 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TOL_1987 SM00091 PAS domain TOL_1987 SM00267 diguanylate cyclase TOL_1987 SM00448 cheY-homologous receiver domain TOL_2014 SM00271 DnaJ molecular chaperone homology domain TOL_2033 SM00155 Phospholipase D. Active site motifs. TOL_2054 SM00226 Low molecular weight phosphatase family TOL_2074 SM00900 TOL_2074 TOL_2100 SM00448 cheY-homologous receiver domain TOL_2102 SM00091 PAS domain TOL_2102 SM00267 diguanylate cyclase TOL_2103 SM00342 helix_turn_helix, arabinose operon control protein TOL_2130 SM01130 TOL_2130 TOL_2144 SM00382 ATPases associated with a variety of cellular activities TOL_2166 SM00382 ATPases associated with a variety of cellular activities TOL_2182 SM00422 helix_turn_helix, mercury resistance TOL_2183 SM00411 bacterial (prokaryotic) histone like domain TOL_2184 SM00873 B3/4 domain TOL_2184 SM00874 tRNA synthetase B5 domain TOL_2184 SM00896 Ferredoxin-fold anticodon binding domain TOL_2218 SM00382 ATPases associated with a variety of cellular activities TOL_2252 SM00342 helix_turn_helix, arabinose operon control protein TOL_2277 SM00382 ATPases associated with a variety of cellular activities TOL_2288 SM00830 Chorismate mutase type II TOL_2306 SM00287 Bacterial SH3 domain homologues TOL_2388 SM00487 DEAD-like helicases superfamily TOL_2388 SM00490 helicase superfamily c-terminal domain TOL_2411 SM01230 TOL_2411 TOL_2413 SM00382 ATPases associated with a variety of cellular activities TOL_2437 SM00935 Outer membrane protein (OmpH-like) TOL_2439 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TOL_2448 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TOL_2485 SM00448 cheY-homologous receiver domain TOL_2486 SM00073 Histidine Phosphotransfer domain TOL_2486 SM00260 Two component signalling adaptor domain TOL_2486 SM00387 Histidine kinase-like ATPases TOL_2486 SM01231 TOL_2486 TOL_2491 SM00382 ATPases associated with a variety of cellular activities TOL_2491 SM00962 SRP54-type protein, GTPase domain TOL_2503 SM00331 Sigma factor PP2C-like phosphatases TOL_2503 SM00448 cheY-homologous receiver domain TOL_2505 SM00448 cheY-homologous receiver domain TOL_2507 SM00138 Methyltransferase, chemotaxis proteins TOL_2508 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TOL_2508 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TOL_2509 SM00260 Two component signalling adaptor domain TOL_2510 SM00073 Histidine Phosphotransfer domain TOL_2510 SM00260 Two component signalling adaptor domain TOL_2510 SM00387 Histidine kinase-like ATPases TOL_2510 SM01231 TOL_2510 TOL_2511 SM00448 cheY-homologous receiver domain TOL_2514 SM00382 ATPases associated with a variety of cellular activities TOL_2519 SM00382 ATPases associated with a variety of cellular activities TOL_2519 SM00448 cheY-homologous receiver domain TOL_2538 SM00984 UDP binding domain TOL_2582 SM00047 Lysozyme subfamily 2 TOL_2595 SM00138 Methyltransferase, chemotaxis proteins TOL_2597 SM00858 TOL_2597 TOL_2618 SM00670 Large family of predicted nucleotide-binding domains TOL_2675 SM00382 ATPases associated with a variety of cellular activities TOL_2676 SM00382 ATPases associated with a variety of cellular activities TOL_2678 SM00382 ATPases associated with a variety of cellular activities TOL_2678 SM01086 C-terminal, D2-small domain, of ClpB protein TOL_2701 SM00849 Metallo-beta-lactamase superfamily TOL_2703 SM01400 TOL_2703 TOL_2717 SM00316 Ribosomal protein S1-like RNA-binding domain TOL_2717 SM00322 K homology RNA-binding domain TOL_2732 SM00851 MGS-like domain TOL_2732 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TOL_2733 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain TOL_2766 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. TOL_2808 SM00422 helix_turn_helix, mercury resistance TOL_2824 SM00481 DNA polymerase alpha chain like domain TOL_2830 SM00091 PAS domain TOL_2830 SM00387 Histidine kinase-like ATPases TOL_2830 SM00388 His Kinase A (phosphoacceptor) domain TOL_2855 SM00798 AICARFT/IMPCHase bienzyme TOL_2855 SM00851 MGS-like domain TOL_2856 SM01209 TOL_2856 TOL_2856 SM01210 TOL_2856 TOL_2857 SM00388 His Kinase A (phosphoacceptor) domain TOL_2857 SM00448 cheY-homologous receiver domain TOL_2867 SM00387 Histidine kinase-like ATPases TOL_2867 SM00388 His Kinase A (phosphoacceptor) domain TOL_2884 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase TOL_2935 SM00014 Acid phosphatase homologues TOL_2960 SM00965 Secretin and TonB N terminus short domain TOL_2977 SM00450 Rhodanese Homology Domain TOL_2989 SM00382 ATPases associated with a variety of cellular activities TOL_2999 SM00387 Histidine kinase-like ATPases TOL_2999 SM00388 His Kinase A (phosphoacceptor) domain TOL_3008 SM01007 Class II Aldolase and Adducin N-terminal domain TOL_3012 SM00460 Transglutaminase/protease-like homologues TOL_3027 SM00853 MutL C terminal dimerisation domain TOL_3027 SM01340 TOL_3027 TOL_3028 SM00257 Lysin motif TOL_3028 SM00646 TOL_3028 TOL_3037 SM00450 Rhodanese Homology Domain TOL_3076 SM01192 TOL_3076 TOL_3076 SM01193 TOL_3076 TOL_3096 SM00116 Domain in cystathionine beta-synthase and other proteins. TOL_3099 SM00382 ATPases associated with a variety of cellular activities TOL_3109 SM00316 Ribosomal protein S1-like RNA-binding domain TOL_3160 SM00967 RNA 2'-O ribose methyltransferase substrate binding TOL_3199 SM00967 RNA 2'-O ribose methyltransferase substrate binding TOL_3207 SM00849 Metallo-beta-lactamase superfamily TOL_3215 SM00387 Histidine kinase-like ATPases TOL_3247 SM00382 ATPases associated with a variety of cellular activities TOL_3249 SM00267 diguanylate cyclase TOL_3249 SM00448 cheY-homologous receiver domain TOL_3280 SM00095 Transthyretin TOL_3284 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TOL_3297 SM00028 Tetratricopeptide repeats TOL_3326 SM00860 SMI1 / KNR4 family TOL_3359 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TOL_3359 SM00387 Histidine kinase-like ATPases TOL_3359 SM00388 His Kinase A (phosphoacceptor) domain TOL_3378 SM00382 ATPases associated with a variety of cellular activities TOL_3410 SM00450 Rhodanese Homology Domain TOL_3425 SM00662 RNA polymerases D TOL_3426 SM00363 S4 RNA-binding domain TOL_3426 SM01390 TOL_3426 TOL_3439 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TOL_3440 SM01374 TOL_3440 TOL_3444 SM00322 K homology RNA-binding domain TOL_3447 SM01382 TOL_3447 TOL_3447 SM01383 TOL_3447 TOL_3453 SM00838 Elongation factor G C-terminus TOL_3453 SM00889 Elongation factor G, domain IV TOL_3461 SM00649 Ribosomal protein L11/L12 TOL_3462 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TOL_3462 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TOL_3496 SM00487 DEAD-like helicases superfamily TOL_3497 SM00506 Appr-1"-p processing enzyme TOL_3521 SM00852 Probable molybdopterin binding domain TOL_3530 SM01152 TOL_3530 TOL_3536 SM00729 Elongator protein 3, MiaB family, Radical SAM TOL_3538 SM00028 Tetratricopeptide repeats TOL_3555 SM00563 Phosphate acyltransferases TOL_3569 SM00938 Nitrogen regulatory protein P-II TOL_3577 SM00345 helix_turn_helix gluconate operon transcriptional repressor TOL_3577 SM00895 TOL_3577 TOL_3581 SM00382 ATPases associated with a variety of cellular activities TOL_3602 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TOL_3610 SM01011 Aminopeptidase P, N-terminal domain TOL_3624 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TOL_3624 SM00387 Histidine kinase-like ATPases TOL_3624 SM00388 His Kinase A (phosphoacceptor) domain TOL_3625 SM00448 cheY-homologous receiver domain TOL_3625 SM00862 Transcriptional regulatory protein, C terminal TOL_3630 SM00091 PAS domain TOL_3630 SM00387 Histidine kinase-like ATPases TOL_3630 SM00388 His Kinase A (phosphoacceptor) domain TOL_3630 SM00448 cheY-homologous receiver domain TOL_3633 SM00363 S4 RNA-binding domain TOL_3642 SM00320 WD40 repeats TOL_3646 SM00849 Metallo-beta-lactamase superfamily TOL_3676 SM00448 cheY-homologous receiver domain TOL_3676 SM00850 LytTr DNA-binding domain TOL_3684 SM00460 Transglutaminase/protease-like homologues TOL_3695 SM00382 ATPases associated with a variety of cellular activities TOL_3704 SM00470 ParB-like nuclease domain TOL_3712 SM00448 cheY-homologous receiver domain TOL_3712 SM00862 Transcriptional regulatory protein, C terminal TOL_3713 SM00387 Histidine kinase-like ATPases