locus-tag class description DY252_00025 PF00905 Penicillin binding protein transpeptidase domain DY252_00025 PF00912 Transglycosylase DY252_00030 PF00912 Transglycosylase DY252_00035 PF01321 Creatinase/Prolidase N-terminal domain DY252_00035 PF00557 Metallopeptidase family M24 DY252_00040 PF00107 Zinc-binding dehydrogenase DY252_00040 PF08240 Alcohol dehydrogenase GroES-like domain DY252_00045 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_00055 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_00060 PF00392 Bacterial regulatory proteins, gntR family DY252_00060 PF07729 FCD domain DY252_00065 PF03786 D-mannonate dehydratase (UxuA) DY252_00070 PF08125 Mannitol dehydrogenase C-terminal domain DY252_00070 PF01232 Mannitol dehydrogenase Rossmann domain DY252_00075 PF00294 pfkB family carbohydrate kinase DY252_00080 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DY252_00095 PF01370 NAD dependent epimerase/dehydratase family DY252_00125 PF08241 Methyltransferase domain DY252_00130 PF00534 Glycosyl transferases group 1 DY252_00130 PF00535 Glycosyl transferase family 2 DY252_00140 PF00529 HlyD membrane-fusion protein of T1SS DY252_00145 PF00664 ABC transporter transmembrane region DY252_00145 PF00005 ABC transporter DY252_00150 PF12802 MarR family DY252_00155 PF13439 Glycosyltransferase Family 4 DY252_00160 PF01425 Amidase DY252_00165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_00170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_00170 PF00005 ABC transporter DY252_00175 PF12911 N-terminal TM domain of oligopeptide transport permease C DY252_00175 PF00528 Binding-protein-dependent transport system inner membrane component DY252_00180 PF00528 Binding-protein-dependent transport system inner membrane component DY252_00185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DY252_00190 PF00596 Class II Aldolase and Adducin N-terminal domain DY252_00200 PF00850 Histone deacetylase domain DY252_00205 PF00202 Aminotransferase class-III DY252_00210 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DY252_00215 PF05336 L-rhamnose mutarotase DY252_00220 PF02653 Branched-chain amino acid transport system / permease component DY252_00225 PF02653 Branched-chain amino acid transport system / permease component DY252_00230 PF00005 ABC transporter DY252_00235 PF13407 Periplasmic binding protein domain DY252_00240 PF08220 DeoR-like helix-turn-helix domain DY252_00240 PF00455 DeoR C terminal sensor domain DY252_00245 PF00596 Class II Aldolase and Adducin N-terminal domain DY252_00250 PF01261 Xylose isomerase-like TIM barrel DY252_00270 PF03852 DNA mismatch endonuclease Vsr DY252_00275 PF00145 C-5 cytosine-specific DNA methylase DY252_00295 PF13411 MerR HTH family regulatory protein DY252_00300 PF02600 Disulfide bond formation protein DsbB DY252_00305 PF13462 Thioredoxin DY252_00310 PF02630 SCO1/SenC DY252_00315 PF04314 Copper chaperone PCu(A)C DY252_00325 PF01252 Signal peptidase (SPase) II DY252_00330 PF02630 SCO1/SenC DY252_00355 PF01325 Iron dependent repressor, N-terminal DNA binding domain DY252_00355 PF02742 Iron dependent repressor, metal binding and dimerisation domain DY252_00375 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DY252_00375 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DY252_00380 PF08534 Redoxin DY252_00385 PF08534 Redoxin DY252_00400 PF02630 SCO1/SenC DY252_00415 PF02683 Cytochrome C biogenesis protein transmembrane region DY252_00420 PF00403 Heavy-metal-associated domain DY252_00440 PF13411 MerR HTH family regulatory protein DY252_00445 PF13411 MerR HTH family regulatory protein DY252_00455 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_00455 PF00403 Heavy-metal-associated domain DY252_00455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DY252_00465 PF00403 Heavy-metal-associated domain DY252_00465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DY252_00465 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_00470 PF13411 MerR HTH family regulatory protein DY252_00490 PF00239 Resolvase, N terminal domain DY252_00490 PF02796 Helix-turn-helix domain of resolvase DY252_00510 PF08676 MutL C terminal dimerisation domain DY252_00510 PF01119 DNA mismatch repair protein, C-terminal domain DY252_00525 PF00665 Integrase core domain DY252_00545 PF00300 Histidine phosphatase superfamily (branch 1) DY252_00550 PF00005 ABC transporter DY252_00550 PF08402 TOBE domain DY252_00555 PF00528 Binding-protein-dependent transport system inner membrane component DY252_00565 PF00158 Sigma-54 interaction domain DY252_00565 PF02954 Bacterial regulatory protein, Fis family DY252_00565 PF00072 Response regulator receiver domain DY252_00570 PF00512 His Kinase A (phospho-acceptor) domain DY252_00570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_00580 PF01751 Toprim domain DY252_00580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_00580 PF00986 DNA gyrase B subunit, carboxyl terminus DY252_00580 PF00204 DNA gyrase B DY252_00585 PF02463 RecF/RecN/SMC N terminal domain DY252_00590 PF02768 DNA polymerase III beta subunit, C-terminal domain DY252_00590 PF00712 DNA polymerase III beta subunit, N-terminal domain DY252_00590 PF02767 DNA polymerase III beta subunit, central domain DY252_00595 PF11638 DnaA N-terminal domain DY252_00595 PF08299 Bacterial dnaA protein helix-turn-helix DY252_00595 PF00308 Bacterial dnaA protein DY252_00600 PF01649 Ribosomal protein S20 DY252_00605 PF00378 Enoyl-CoA hydratase/isomerase DY252_00610 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DY252_00610 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DY252_00610 PF06827 Zinc finger found in FPG and IleRS DY252_00615 PF01925 Sulfite exporter TauE/SafE DY252_00620 PF07690 Major Facilitator Superfamily DY252_00625 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DY252_00635 PF00216 Bacterial DNA-binding protein DY252_00640 PF01343 Peptidase family S49 DY252_00645 PF00575 S1 RNA binding domain DY252_00650 PF02224 Cytidylate kinase DY252_00655 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DY252_00675 PF00155 Aminotransferase class I and II DY252_00680 PF13977 BetI-type transcriptional repressor, C-terminal DY252_00680 PF00440 Bacterial regulatory proteins, tetR family DY252_00685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DY252_00685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_00690 PF00596 Class II Aldolase and Adducin N-terminal domain DY252_00715 PF04143 Sulphur transport DY252_00725 PF02540 NAD synthase DY252_00725 PF00117 Glutamine amidotransferase class-I DY252_00725 PF00958 GMP synthase C terminal domain DY252_00730 PF00211 Adenylate and Guanylate cyclase catalytic domain DY252_00735 PF00011 Hsp20/alpha crystallin family DY252_00745 PF12706 Beta-lactamase superfamily domain DY252_00745 PF00753 Metallo-beta-lactamase superfamily DY252_00750 PF13426 PAS domain DY252_00750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_00750 PF08447 PAS fold DY252_00755 PF13426 PAS domain DY252_00755 PF08447 PAS fold DY252_00755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_00760 PF03692 Putative zinc- or iron-chelating domain DY252_00765 PF07685 CobB/CobQ-like glutamine amidotransferase domain DY252_00765 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DY252_00770 PF02630 SCO1/SenC DY252_00780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DY252_00785 PF01888 CbiD DY252_00790 PF02571 Precorrin-6x reductase CbiJ/CobK DY252_00795 PF16363 GDP-mannose 4,6 dehydratase DY252_00815 PF13649 Methyltransferase domain DY252_00820 PF00043 Glutathione S-transferase, C-terminal domain DY252_00820 PF13417 Glutathione S-transferase, N-terminal domain DY252_00825 PF07685 CobB/CobQ-like glutamine amidotransferase domain DY252_00830 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DY252_00845 PF02514 CobN/Magnesium Chelatase DY252_00850 PF07683 Cobalamin synthesis protein cobW C-terminal domain DY252_00850 PF02492 CobW/HypB/UreG, nucleotide-binding domain DY252_00855 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DY252_00865 PF00300 Histidine phosphatase superfamily (branch 1) DY252_00870 PF02654 Cobalamin-5-phosphate synthase DY252_00875 PF02277 Phosphoribosyltransferase DY252_00885 PF01370 NAD dependent epimerase/dehydratase family DY252_00890 PF13580 SIS domain DY252_00895 PF00294 pfkB family carbohydrate kinase DY252_00895 PF01467 Cytidylyltransferase-like DY252_00905 PF03186 CobD/Cbib protein DY252_00910 PF01903 CbiX DY252_00915 PF02570 Precorrin-8X methylmutase DY252_00920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DY252_00925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DY252_00930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DY252_00935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DY252_00940 PF14403 Circularly permuted ATP-grasp type 2 DY252_00945 PF04168 A predicted alpha-helical domain with a conserved ER motif. DY252_00945 PF14403 Circularly permuted ATP-grasp type 2 DY252_00950 PF08379 Bacterial transglutaminase-like N-terminal region DY252_00950 PF01841 Transglutaminase-like superfamily DY252_00960 PF00690 Cation transporter/ATPase, N-terminus DY252_00960 PF00689 Cation transporting ATPase, C-terminus DY252_00975 PF07690 Major Facilitator Superfamily DY252_00995 PF01209 ubiE/COQ5 methyltransferase family DY252_01005 PF01032 FecCD transport family DY252_01010 PF00005 ABC transporter DY252_01015 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DY252_01020 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DY252_01030 PF02915 Rubrerythrin DY252_01045 PF03725 3' exoribonuclease family, domain 2 DY252_01045 PF00575 S1 RNA binding domain DY252_01045 PF00013 KH domain DY252_01045 PF01138 3' exoribonuclease family, domain 1 DY252_01045 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DY252_01050 PF00312 Ribosomal protein S15 DY252_01055 PF01509 TruB family pseudouridylate synthase (N terminal domain) DY252_01055 PF16198 tRNA pseudouridylate synthase B C-terminal domain DY252_01055 PF09157 Pseudouridine synthase II TruB, C-terminal DY252_01060 PF02033 Ribosome-binding factor A DY252_01065 PF11987 Translation-initiation factor 2 DY252_01065 PF08364 Bacterial translation initiation factor IF-2 associated region DY252_01065 PF04760 Translation initiation factor IF-2, N-terminal region DY252_01065 PF00009 Elongation factor Tu GTP binding domain DY252_01065 PF03144 Elongation factor Tu domain 2 DY252_01070 PF04296 Protein of unknown function (DUF448) DY252_01075 PF00575 S1 RNA binding domain DY252_01075 PF08529 NusA N-terminal domain DY252_01075 PF13184 NusA-like KH domain DY252_01080 PF17384 RimP C-terminal SH3 domain DY252_01080 PF02576 RimP N-terminal domain DY252_01090 PF02390 Putative methyltransferase DY252_01095 PF02773 S-adenosylmethionine synthetase, C-terminal domain DY252_01095 PF02772 S-adenosylmethionine synthetase, central domain DY252_01095 PF00438 S-adenosylmethionine synthetase, N-terminal domain DY252_01100 PF01381 Helix-turn-helix DY252_01105 PF00795 Carbon-nitrogen hydrolase DY252_01110 PF00571 CBS domain DY252_01110 PF03471 Transporter associated domain DY252_01115 PF02130 Uncharacterized protein family UPF0054 DY252_01120 PF02562 PhoH-like protein DY252_01125 PF00919 Uncharacterized protein family UPF0004 DY252_01125 PF01938 TRAM domain DY252_01125 PF04055 Radical SAM superfamily DY252_01140 PF01475 Ferric uptake regulator family DY252_01155 PF00814 Glycoprotease family DY252_01160 PF01427 D-ala-D-ala dipeptidase DY252_01165 PF08402 TOBE domain DY252_01165 PF00005 ABC transporter DY252_01170 PF00528 Binding-protein-dependent transport system inner membrane component DY252_01180 PF01547 Bacterial extracellular solute-binding protein DY252_01185 PF00232 Glycosyl hydrolase family 1 DY252_01190 PF00356 Bacterial regulatory proteins, lacI family DY252_01195 PF02308 MgtC family DY252_01200 PF03466 LysR substrate binding domain DY252_01200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_01205 PF01810 LysE type translocator DY252_01215 PF00899 ThiF family DY252_01220 PF00291 Pyridoxal-phosphate dependent enzyme DY252_01225 PF02082 Transcriptional regulator DY252_01230 PF00692 dUTPase DY252_01235 PF04127 DNA / pantothenate metabolism flavoprotein DY252_01235 PF02441 Flavoprotein DY252_01245 PF00881 Nitroreductase family DY252_01250 PF16736 Single Cache-like DY252_01250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_01250 PF00512 His Kinase A (phospho-acceptor) domain DY252_01250 PF00989 PAS fold DY252_01255 PF00004 ATPase family associated with various cellular activities (AAA) DY252_01255 PF07724 AAA domain (Cdc48 subfamily) DY252_01255 PF10431 C-terminal, D2-small domain, of ClpB protein DY252_01260 PF00227 Proteasome subunit DY252_01265 PF01979 Amidohydrolase family DY252_01265 PF13382 Adenine deaminase C-terminal domain DY252_01270 PF00211 Adenylate and Guanylate cyclase catalytic domain DY252_01270 PF02743 Cache domain DY252_01270 PF00672 HAMP domain DY252_01275 PF00475 Imidazoleglycerol-phosphate dehydratase DY252_01285 PF00117 Glutamine amidotransferase class-I DY252_01290 PF00583 Acetyltransferase (GNAT) family DY252_01295 PF00977 Histidine biosynthesis protein DY252_01300 PF00977 Histidine biosynthesis protein DY252_01305 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DY252_01310 PF01230 HIT domain DY252_01320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_01320 PF03466 LysR substrate binding domain DY252_01330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_01340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_01340 PF03466 LysR substrate binding domain DY252_01365 PF00398 Ribosomal RNA adenine dimethylase DY252_01370 PF00248 Aldo/keto reductase family DY252_01380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_01380 PF03466 LysR substrate binding domain DY252_01385 PF01078 Magnesium chelatase, subunit ChlI DY252_01385 PF13335 Magnesium chelatase, subunit ChlI C-terminal DY252_01405 PF12802 MarR family DY252_01425 PF13417 Glutathione S-transferase, N-terminal domain DY252_01425 PF00043 Glutathione S-transferase, C-terminal domain DY252_01435 PF07883 Cupin domain DY252_01440 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DY252_01440 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DY252_01470 PF04055 Radical SAM superfamily DY252_01495 PF04186 FxsA cytoplasmic membrane protein DY252_01500 PF02556 Preprotein translocase subunit SecB DY252_01510 PF00762 Ferrochelatase DY252_01515 PF01208 Uroporphyrinogen decarboxylase (URO-D) DY252_01520 PF03618 Kinase/pyrophosphorylase DY252_01525 PF02545 Maf-like protein DY252_01530 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DY252_01530 PF01488 Shikimate / quinate 5-dehydrogenase DY252_01530 PF08501 Shikimate dehydrogenase substrate binding domain DY252_01535 PF01121 Dephospho-CoA kinase DY252_01540 PF00929 Exonuclease DY252_01550 PF01713 Smr domain DY252_01560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DY252_01560 PF07498 Rho termination factor, N-terminal domain DY252_01560 PF07497 Rho termination factor, RNA-binding domain DY252_01575 PF13291 ACT domain DY252_01575 PF04607 Region found in RelA / SpoT proteins DY252_01575 PF02824 TGS domain DY252_01585 PF00107 Zinc-binding dehydrogenase DY252_01585 PF08240 Alcohol dehydrogenase GroES-like domain DY252_01600 PF03190 Protein of unknown function, DUF255 DY252_01615 PF01926 50S ribosome-binding GTPase DY252_01615 PF12631 MnmE helical domain DY252_01615 PF10396 GTP-binding protein TrmE N-terminus DY252_01620 PF01134 Glucose inhibited division protein A DY252_01620 PF13932 GidA associated domain DY252_01625 PF02527 rRNA small subunit methyltransferase G DY252_01630 PF13614 AAA domain DY252_01635 PF02195 ParB-like nuclease domain DY252_01635 PF17762 HTH domain found in ParB protein DY252_01660 PF13609 Gram-negative porin DY252_01675 PF02581 Thiamine monophosphate synthase DY252_01685 PF00072 Response regulator receiver domain DY252_01685 PF00486 Transcriptional regulatory protein, C terminal DY252_01690 PF00925 GTP cyclohydrolase II DY252_01710 PF00579 tRNA synthetases class I (W and Y) DY252_01715 PF03023 Lipid II flippase MurJ DY252_01720 PF01909 Nucleotidyltransferase domain DY252_01720 PF01966 HD domain DY252_01720 PF08335 GlnD PII-uridylyltransferase DY252_01725 PF01624 MutS domain I DY252_01725 PF05188 MutS domain II DY252_01725 PF05192 MutS domain III DY252_01725 PF00488 MutS domain V DY252_01725 PF05190 MutS family domain IV DY252_01740 PF00390 Malic enzyme, N-terminal domain DY252_01740 PF03949 Malic enzyme, NAD binding domain DY252_01740 PF01515 Phosphate acetyl/butaryl transferase DY252_01755 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DY252_01760 PF01106 NifU-like domain DY252_01775 PF01661 Macro domain DY252_01780 PF00719 Inorganic pyrophosphatase DY252_01785 PF00535 Glycosyl transferase family 2 DY252_01790 PF16363 GDP-mannose 4,6 dehydratase DY252_01795 PF03466 LysR substrate binding domain DY252_01795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_01820 PF02146 Sir2 family DY252_01825 PF01025 GrpE DY252_01830 PF01628 HrcA protein C terminal domain DY252_01835 PF03725 3' exoribonuclease family, domain 2 DY252_01835 PF01138 3' exoribonuclease family, domain 1 DY252_01840 PF01725 Ham1 family DY252_01845 PF06969 HemN C-terminal domain DY252_01845 PF04055 Radical SAM superfamily DY252_01855 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DY252_01855 PF00535 Glycosyl transferase family 2 DY252_01865 PF03062 MBOAT, membrane-bound O-acyltransferase family DY252_01880 PF01380 SIS domain DY252_01880 PF00571 CBS domain DY252_01895 PF00005 ABC transporter DY252_01900 PF04963 Sigma-54 factor, core binding domain DY252_01900 PF00309 Sigma-54 factor, Activator interacting domain (AID) DY252_01900 PF04552 Sigma-54, DNA binding domain DY252_01905 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DY252_01905 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DY252_01910 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DY252_01915 PF07690 Major Facilitator Superfamily DY252_01925 PF00294 pfkB family carbohydrate kinase DY252_01955 PF02021 Uncharacterised protein family UPF0102 DY252_01960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DY252_01970 PF00633 Helix-hairpin-helix motif DY252_01970 PF00730 HhH-GPD superfamily base excision DNA repair protein DY252_01970 PF10576 Iron-sulfur binding domain of endonuclease III DY252_01980 PF00012 Hsp70 protein DY252_01985 PF00684 DnaJ central domain DY252_01985 PF00226 DnaJ domain DY252_01985 PF01556 DnaJ C terminal domain DY252_01990 PF01113 Dihydrodipicolinate reductase, N-terminus DY252_01990 PF05173 Dihydrodipicolinate reductase, C-terminus DY252_01995 PF01612 3'-5' exonuclease DY252_01995 PF00476 DNA polymerase family A DY252_01995 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DY252_01995 PF01367 5'-3' exonuclease, C-terminal SAM fold DY252_02015 PF02875 Mur ligase family, glutamate ligase domain DY252_02015 PF08245 Mur ligase middle domain DY252_02020 PF17848 Acetyl-coA carboxylase zinc finger domain DY252_02020 PF01039 Carboxyl transferase domain DY252_02025 PF00290 Tryptophan synthase alpha chain DY252_02030 PF00291 Pyridoxal-phosphate dependent enzyme DY252_02040 PF00005 ABC transporter DY252_02050 PF12146 Serine aminopeptidase, S33 DY252_02070 PF01048 Phosphorylase superfamily DY252_02075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DY252_02075 PF00205 Thiamine pyrophosphate enzyme, central domain DY252_02075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DY252_02090 PF02397 Bacterial sugar transferase DY252_02095 PF00072 Response regulator receiver domain DY252_02095 PF00486 Transcriptional regulatory protein, C terminal DY252_02100 PF01590 GAF domain DY252_02100 PF00563 EAL domain DY252_02100 PF00360 Phytochrome region DY252_02100 PF00990 Diguanylate cyclase, GGDEF domain DY252_02110 PF13426 PAS domain DY252_02110 PF08448 PAS fold DY252_02110 PF00512 His Kinase A (phospho-acceptor) domain DY252_02110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_02110 PF00072 Response regulator receiver domain DY252_02115 PF00072 Response regulator receiver domain DY252_02115 PF00158 Sigma-54 interaction domain DY252_02115 PF02954 Bacterial regulatory protein, Fis family DY252_02120 PF00072 Response regulator receiver domain DY252_02120 PF00196 Bacterial regulatory proteins, luxR family DY252_02130 PF17954 Quercetinase C-terminal cupin domain DY252_02130 PF02678 Pirin DY252_02135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_02135 PF03466 LysR substrate binding domain DY252_02145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_02145 PF03466 LysR substrate binding domain DY252_02160 PF08402 TOBE domain DY252_02160 PF00005 ABC transporter DY252_02170 PF00528 Binding-protein-dependent transport system inner membrane component DY252_02175 PF00528 Binding-protein-dependent transport system inner membrane component DY252_02180 PF01177 Asp/Glu/Hydantoin racemase DY252_02185 PF07729 FCD domain DY252_02185 PF00392 Bacterial regulatory proteins, gntR family DY252_02190 PF01925 Sulfite exporter TauE/SafE DY252_02205 PF01970 Tripartite tricarboxylate transporter TctA family DY252_02225 PF04349 Periplasmic glucan biosynthesis protein, MdoG DY252_02230 PF00535 Glycosyl transferase family 2 DY252_02240 PF00106 short chain dehydrogenase DY252_02245 PF00378 Enoyl-CoA hydratase/isomerase DY252_02255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DY252_02255 PF12806 Acetyl-CoA dehydrogenase C-terminal like DY252_02255 PF02770 Acyl-CoA dehydrogenase, middle domain DY252_02255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DY252_02260 PF00378 Enoyl-CoA hydratase/isomerase DY252_02260 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DY252_02260 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DY252_02270 PF00376 MerR family regulatory protein DY252_02270 PF09278 MerR, DNA binding DY252_02275 PF13193 AMP-binding enzyme C-terminal domain DY252_02275 PF00501 AMP-binding enzyme DY252_02295 PF16998 17 kDa outer membrane surface antigen DY252_02295 PF05433 Glycine zipper 2TM domain DY252_02300 PF01979 Amidohydrolase family DY252_02310 PF07690 Major Facilitator Superfamily DY252_02320 PF00593 TonB dependent receptor DY252_02320 PF07715 TonB-dependent Receptor Plug Domain DY252_02325 PF05171 Haemin-degrading HemS.ChuX domain DY252_02330 PF01497 Periplasmic binding protein DY252_02335 PF01032 FecCD transport family DY252_02340 PF00005 ABC transporter DY252_02345 PF03466 LysR substrate binding domain DY252_02345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_02350 PF01266 FAD dependent oxidoreductase DY252_02355 PF00202 Aminotransferase class-III DY252_02360 PF00171 Aldehyde dehydrogenase family DY252_02365 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DY252_02365 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DY252_02375 PF02581 Thiamine monophosphate synthase DY252_02380 PF02110 Hydroxyethylthiazole kinase family DY252_02385 PF17674 HHH domain DY252_02385 PF16921 Tex protein YqgF-like domain DY252_02385 PF09371 Tex-like protein N-terminal domain DY252_02385 PF00575 S1 RNA binding domain DY252_02390 PF07896 Protein of unknown function (DUF1674) DY252_02395 PF00834 Ribulose-phosphate 3 epimerase family DY252_02400 PF01189 16S rRNA methyltransferase RsmB/F DY252_02400 PF01029 NusB family DY252_02405 PF00953 Glycosyl transferase family 4 DY252_02410 PF02719 Polysaccharide biosynthesis protein DY252_02415 PF07063 Domain of unknown function (DUF1338) DY252_02420 PF01808 AICARFT/IMPCHase bienzyme DY252_02420 PF02142 MGS-like domain DY252_02440 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DY252_02440 PF03900 Porphobilinogen deaminase, C-terminal domain DY252_02445 PF00814 Glycoprotease family DY252_02450 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DY252_02450 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DY252_02455 PF03795 YCII-related domain DY252_02475 PF00534 Glycosyl transferases group 1 DY252_02475 PF13439 Glycosyltransferase Family 4 DY252_02485 PF05198 Translation initiation factor IF-3, N-terminal domain DY252_02485 PF00707 Translation initiation factor IF-3, C-terminal domain DY252_02490 PF00486 Transcriptional regulatory protein, C terminal DY252_02490 PF00072 Response regulator receiver domain DY252_02495 PF03547 Membrane transport protein DY252_02505 PF01632 Ribosomal protein L35 DY252_02510 PF00453 Ribosomal protein L20 DY252_02515 PF01409 tRNA synthetases class II core domain (F) DY252_02515 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DY252_02520 PF03484 tRNA synthetase B5 domain DY252_02520 PF03147 Ferredoxin-fold anticodon binding domain DY252_02520 PF01588 Putative tRNA binding domain DY252_02520 PF03483 B3/4 domain DY252_02520 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DY252_02530 PF00360 Phytochrome region DY252_02530 PF00512 His Kinase A (phospho-acceptor) domain DY252_02530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_02530 PF08446 PAS fold DY252_02530 PF01590 GAF domain DY252_02535 PF06421 GTP-binding protein LepA C-terminus DY252_02535 PF00009 Elongation factor Tu GTP binding domain DY252_02535 PF03144 Elongation factor Tu domain 2 DY252_02535 PF00679 Elongation factor G C-terminus DY252_02545 PF03928 Haem-degrading DY252_02555 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_02560 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DY252_02570 PF12804 MobA-like NTP transferase domain DY252_02575 PF12705 PD-(D/E)XK nuclease superfamily DY252_02580 PF13361 UvrD-like helicase C-terminal domain DY252_02580 PF12705 PD-(D/E)XK nuclease superfamily DY252_02580 PF00580 UvrD/REP helicase N-terminal domain DY252_02585 PF00085 Thioredoxin DY252_02590 PF00672 HAMP domain DY252_02590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_02590 PF17200 Single Cache domain 2 DY252_02595 PF01580 FtsK/SpoIIIE family DY252_02595 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DY252_02595 PF17854 FtsK alpha domain DY252_02595 PF09397 Ftsk gamma domain DY252_02605 PF00909 Ammonium Transporter Family DY252_02610 PF00909 Ammonium Transporter Family DY252_02615 PF00543 Nitrogen regulatory protein P-II DY252_02620 PF01494 FAD binding domain DY252_02625 PF03922 OmpW family DY252_02635 PF03966 Trm112p-like protein DY252_02645 PF00085 Thioredoxin DY252_02675 PF05088 Bacterial NAD-glutamate dehydrogenase DY252_02680 PF00440 Bacterial regulatory proteins, tetR family DY252_02685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DY252_02685 PF00529 HlyD membrane-fusion protein of T1SS DY252_02690 PF00873 AcrB/AcrD/AcrF family DY252_02705 PF01435 Peptidase family M48 DY252_02715 PF01027 Inhibitor of apoptosis-promoting Bax1 DY252_02725 PF00501 AMP-binding enzyme DY252_02725 PF13193 AMP-binding enzyme C-terminal domain DY252_02735 PF00005 ABC transporter DY252_02740 PF13472 GDSL-like Lipase/Acylhydrolase family DY252_02755 PF00248 Aldo/keto reductase family DY252_02760 PF02678 Pirin DY252_02760 PF05726 Pirin C-terminal cupin domain DY252_02770 PF03807 NADP oxidoreductase coenzyme F420-dependent DY252_02770 PF14748 Pyrroline-5-carboxylate reductase dimerisation DY252_02780 PF00892 EamA-like transporter family DY252_02785 PF01047 MarR family DY252_02840 PF08240 Alcohol dehydrogenase GroES-like domain DY252_02840 PF00107 Zinc-binding dehydrogenase DY252_02855 PF03466 LysR substrate binding domain DY252_02855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_02860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DY252_02865 PF00528 Binding-protein-dependent transport system inner membrane component DY252_02870 PF00528 Binding-protein-dependent transport system inner membrane component DY252_02870 PF12911 N-terminal TM domain of oligopeptide transport permease C DY252_02875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_02875 PF00005 ABC transporter DY252_02895 PF02789 Cytosol aminopeptidase family, N-terminal domain DY252_02895 PF00883 Cytosol aminopeptidase family, catalytic domain DY252_02905 PF03167 Uracil DNA glycosylase superfamily DY252_02910 PF01329 Pterin 4 alpha carbinolamine dehydratase DY252_02915 PF00106 short chain dehydrogenase DY252_02920 PF00892 EamA-like transporter family DY252_02925 PF00892 EamA-like transporter family DY252_02930 PF00892 EamA-like transporter family DY252_02935 PF01037 Lrp/AsnC ligand binding domain DY252_02940 PF03471 Transporter associated domain DY252_02940 PF00999 Sodium/hydrogen exchanger family DY252_02940 PF02080 TrkA-C domain DY252_02955 PF01810 LysE type translocator DY252_02965 PF00459 Inositol monophosphatase family DY252_02970 PF00459 Inositol monophosphatase family DY252_02975 PF00034 Cytochrome c DY252_02980 PF02348 Cytidylyltransferase DY252_02985 PF01842 ACT domain DY252_02985 PF00800 Prephenate dehydratase DY252_02990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_02990 PF17200 Single Cache domain 2 DY252_02990 PF00672 HAMP domain DY252_02995 PF00270 DEAD/DEAH box helicase DY252_02995 PF00271 Helicase conserved C-terminal domain DY252_03010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DY252_03010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DY252_03010 PF02770 Acyl-CoA dehydrogenase, middle domain DY252_03015 PF00108 Thiolase, N-terminal domain DY252_03015 PF02803 Thiolase, C-terminal domain DY252_03030 PF00484 Carbonic anhydrase DY252_03035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DY252_03035 PF02770 Acyl-CoA dehydrogenase, middle domain DY252_03035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DY252_03040 PF07804 HipA-like C-terminal domain DY252_03040 PF13657 HipA N-terminal domain DY252_03050 PF02954 Bacterial regulatory protein, Fis family DY252_03050 PF00158 Sigma-54 interaction domain DY252_03055 PF04012 PspA/IM30 family DY252_03070 PF13173 AAA domain DY252_03070 PF13635 Domain of unknown function (DUF4143) DY252_03090 PF03328 HpcH/HpaI aldolase/citrate lyase family DY252_03095 PF01575 MaoC like domain DY252_03100 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DY252_03110 PF02910 Fumarate reductase flavoprotein C-term DY252_03110 PF00890 FAD binding domain DY252_03115 PF13085 2Fe-2S iron-sulfur cluster binding domain DY252_03125 PF04115 Ureidoglycolate lyase DY252_03130 PF03561 Allantoicase repeat DY252_03135 PF09349 OHCU decarboxylase DY252_03135 PF01014 Uricase DY252_03145 PF00576 HIUase/Transthyretin family DY252_03150 PF01799 [2Fe-2S] binding domain DY252_03150 PF00111 2Fe-2S iron-sulfur cluster binding domain DY252_03155 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DY252_03155 PF00034 Cytochrome c DY252_03155 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DY252_03165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DY252_03170 PF00005 ABC transporter DY252_03180 PF02653 Branched-chain amino acid transport system / permease component DY252_03185 PF02608 ABC transporter substrate-binding protein PnrA-like DY252_03200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_03200 PF00672 HAMP domain DY252_03200 PF16591 Helical bimodular sensor domain DY252_03205 PF00850 Histone deacetylase domain DY252_03210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_03210 PF03466 LysR substrate binding domain DY252_03220 PF16123 Hydroxyacylglutathione hydrolase C-terminus DY252_03220 PF00753 Metallo-beta-lactamase superfamily DY252_03225 PF03466 LysR substrate binding domain DY252_03225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_03235 PF02653 Branched-chain amino acid transport system / permease component DY252_03245 PF12399 Branched-chain amino acid ATP-binding cassette transporter DY252_03245 PF00005 ABC transporter DY252_03250 PF00005 ABC transporter DY252_03255 PF01774 UreD urease accessory protein DY252_03260 PF00547 Urease, gamma subunit DY252_03265 PF00699 Urease beta subunit DY252_03270 PF00449 Urease alpha-subunit, N-terminal domain DY252_03270 PF01979 Amidohydrolase family DY252_03275 PF05194 UreE urease accessory protein, C-terminal domain DY252_03275 PF02814 UreE urease accessory protein, N-terminal domain DY252_03280 PF01730 UreF DY252_03285 PF02492 CobW/HypB/UreG, nucleotide-binding domain DY252_03300 PF02632 BioY family DY252_03305 PF00005 ABC transporter DY252_03310 PF02361 Cobalt transport protein DY252_03315 PF00756 Putative esterase DY252_03320 PF00107 Zinc-binding dehydrogenase DY252_03320 PF08240 Alcohol dehydrogenase GroES-like domain DY252_03325 PF03466 LysR substrate binding domain DY252_03325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_03335 PF00106 short chain dehydrogenase DY252_03340 PF18024 Helix-turn-helix domain DY252_03340 PF00158 Sigma-54 interaction domain DY252_03345 PF01053 Cys/Met metabolism PLP-dependent enzyme DY252_03365 PF02615 Malate/L-lactate dehydrogenase DY252_03370 PF01699 Sodium/calcium exchanger protein DY252_03375 PF01914 MarC family integral membrane protein DY252_03385 PF01435 Peptidase family M48 DY252_03390 PF00005 ABC transporter DY252_03390 PF00664 ABC transporter transmembrane region DY252_03395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DY252_03395 PF00529 HlyD membrane-fusion protein of T1SS DY252_03660 PF12708 Pectate lyase superfamily protein DY252_03660 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DY252_03660 PF13229 Right handed beta helix region DY252_03665 PF01207 Dihydrouridine synthase (Dus) DY252_03675 PF01642 Methylmalonyl-CoA mutase DY252_03675 PF02310 B12 binding domain DY252_03680 PF01642 Methylmalonyl-CoA mutase DY252_03685 PF00196 Bacterial regulatory proteins, luxR family DY252_03685 PF00072 Response regulator receiver domain DY252_03690 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DY252_03695 PF01037 Lrp/AsnC ligand binding domain DY252_03705 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DY252_03710 PF00072 Response regulator receiver domain DY252_03710 PF13426 PAS domain DY252_03710 PF08448 PAS fold DY252_03710 PF00512 His Kinase A (phospho-acceptor) domain DY252_03710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_03715 PF00072 Response regulator receiver domain DY252_03715 PF00158 Sigma-54 interaction domain DY252_03720 PF12833 Helix-turn-helix domain DY252_03720 PF00072 Response regulator receiver domain DY252_03725 PF00158 Sigma-54 interaction domain DY252_03725 PF02954 Bacterial regulatory protein, Fis family DY252_03725 PF00072 Response regulator receiver domain DY252_03740 PF01960 ArgJ family DY252_03765 PF07516 SecA Wing and Scaffold domain DY252_03765 PF01043 SecA preprotein cross-linking domain DY252_03765 PF02810 SEC-C motif DY252_03765 PF07517 SecA DEAD-like domain DY252_03790 PF00293 NUDIX domain DY252_03795 PF02464 Competence-damaged protein DY252_03795 PF18146 Damage-inducible protein CinA KH domain DY252_03795 PF00994 Probable molybdopterin binding domain DY252_03810 PF00881 Nitroreductase family DY252_03825 PF00689 Cation transporting ATPase, C-terminus DY252_03825 PF00690 Cation transporter/ATPase, N-terminus DY252_03845 PF02673 Bacitracin resistance protein BacA DY252_03850 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DY252_03850 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_03855 PF01645 Conserved region in glutamate synthase DY252_03855 PF04898 Glutamate synthase central domain DY252_03855 PF01493 GXGXG motif DY252_03855 PF00310 Glutamine amidotransferases class-II DY252_03870 PF00512 His Kinase A (phospho-acceptor) domain DY252_03870 PF00072 Response regulator receiver domain DY252_03870 PF13188 PAS domain DY252_03870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_03870 PF08448 PAS fold DY252_03875 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DY252_03890 PF01258 Prokaryotic dksA/traR C4-type zinc finger DY252_03900 PF13545 Crp-like helix-turn-helix domain DY252_03900 PF00027 Cyclic nucleotide-binding domain DY252_03905 PF00072 Response regulator receiver domain DY252_03905 PF00196 Bacterial regulatory proteins, luxR family DY252_03910 PF17200 Single Cache domain 2 DY252_03910 PF07730 Histidine kinase DY252_03915 PF02785 Biotin carboxylase C-terminal domain DY252_03915 PF00364 Biotin-requiring enzyme DY252_03915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DY252_03915 PF00682 HMGL-like DY252_03915 PF02436 Conserved carboxylase domain DY252_03915 PF00289 Biotin carboxylase, N-terminal domain DY252_03920 PF01565 FAD binding domain DY252_03920 PF02913 FAD linked oxidases, C-terminal domain DY252_03925 PF01565 FAD binding domain DY252_03930 PF13183 4Fe-4S dicluster domain DY252_03930 PF02754 Cysteine-rich domain DY252_03940 PF12849 PBP superfamily domain DY252_03945 PF00528 Binding-protein-dependent transport system inner membrane component DY252_03950 PF00528 Binding-protein-dependent transport system inner membrane component DY252_03955 PF00005 ABC transporter DY252_03960 PF01895 PhoU domain DY252_03965 PF00486 Transcriptional regulatory protein, C terminal DY252_03965 PF00072 Response regulator receiver domain DY252_03970 PF00999 Sodium/hydrogen exchanger family DY252_03970 PF02254 TrkA-N domain DY252_03975 PF01699 Sodium/calcium exchanger protein DY252_03985 PF02152 Dihydroneopterin aldolase DY252_03990 PF01541 GIY-YIG catalytic domain DY252_03990 PF08459 UvrC Helix-hairpin-helix N-terminal DY252_03990 PF12826 Helix-hairpin-helix motif DY252_03990 PF02151 UvrB/uvrC motif DY252_03995 PF00860 Permease family DY252_04000 PF01066 CDP-alcohol phosphatidyltransferase DY252_04005 PF02391 MoaE protein DY252_04020 PF07021 Methionine biosynthesis protein MetW DY252_04020 PF00561 alpha/beta hydrolase fold DY252_04025 PF00561 alpha/beta hydrolase fold DY252_04035 PF00155 Aminotransferase class I and II DY252_04040 PF02153 Prephenate dehydrogenase DY252_04045 PF00892 EamA-like transporter family DY252_04060 PF01553 Acyltransferase DY252_04075 PF00005 ABC transporter DY252_04090 PF08281 Sigma-70, region 4 DY252_04090 PF04542 Sigma-70 region 2 DY252_04095 PF04773 FecR protein DY252_04095 PF16220 Domain of unknown function (DUF4880) DY252_04100 PF07715 TonB-dependent Receptor Plug Domain DY252_04100 PF07660 Secretin and TonB N terminus short domain DY252_04100 PF00593 TonB dependent receptor DY252_04110 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DY252_04110 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DY252_04115 PF14698 Argininosuccinate lyase C-terminal DY252_04115 PF00206 Lyase DY252_04120 PF08534 Redoxin DY252_04125 PF00294 pfkB family carbohydrate kinase DY252_04130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DY252_04130 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DY252_04135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DY252_04135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DY252_04140 PF01012 Electron transfer flavoprotein domain DY252_04140 PF00766 Electron transfer flavoprotein FAD-binding domain DY252_04145 PF01012 Electron transfer flavoprotein domain DY252_04150 PF01923 Cobalamin adenosyltransferase DY252_04160 PF01590 GAF domain DY252_04160 PF00158 Sigma-54 interaction domain DY252_04170 PF00528 Binding-protein-dependent transport system inner membrane component DY252_04175 PF00005 ABC transporter DY252_04180 PF02560 Cyanate lyase C-terminal domain DY252_04185 PF02798 Glutathione S-transferase, N-terminal domain DY252_04185 PF00043 Glutathione S-transferase, C-terminal domain DY252_04190 PF05221 S-adenosyl-L-homocysteine hydrolase DY252_04190 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DY252_04200 PF12729 Four helix bundle sensory module for signal transduction DY252_04200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_04200 PF00672 HAMP domain DY252_04205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DY252_04205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DY252_04205 PF02770 Acyl-CoA dehydrogenase, middle domain DY252_04220 PF00440 Bacterial regulatory proteins, tetR family DY252_04230 PF03707 Bacterial signalling protein N terminal repeat DY252_04230 PF00990 Diguanylate cyclase, GGDEF domain DY252_04230 PF00563 EAL domain DY252_04235 PF00075 RNase H DY252_04240 PF01636 Phosphotransferase enzyme family DY252_04245 PF02401 LytB protein DY252_04255 PF01571 Aminomethyltransferase folate-binding domain DY252_04255 PF08669 Glycine cleavage T-protein C-terminal barrel domain DY252_04260 PF01597 Glycine cleavage H-protein DY252_04265 PF02347 Glycine cleavage system P-protein DY252_04270 PF00266 Aminotransferase class-V DY252_04285 PF08534 Redoxin DY252_04285 PF00462 Glutaredoxin DY252_04290 PF11412 Disulphide bond corrector protein DsbC DY252_04290 PF02683 Cytochrome C biogenesis protein transmembrane region DY252_04295 PF02622 Uncharacterized ACR, COG1678 DY252_04305 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DY252_04305 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DY252_04310 PF00115 Cytochrome C and Quinol oxidase polypeptide I DY252_04315 PF01040 UbiA prenyltransferase family DY252_04320 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DY252_04325 PF00510 Cytochrome c oxidase subunit III DY252_04335 PF02104 SURF1 family DY252_04340 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DY252_04345 PF13545 Crp-like helix-turn-helix domain DY252_04345 PF00027 Cyclic nucleotide-binding domain DY252_04355 PF00675 Insulinase (Peptidase family M16) DY252_04355 PF05193 Peptidase M16 inactive domain DY252_04360 PF00480 ROK family DY252_04380 PF00288 GHMP kinases N terminal domain DY252_04380 PF08544 GHMP kinases C terminal DY252_04390 PF01546 Peptidase family M20/M25/M40 DY252_04390 PF07687 Peptidase dimerisation domain DY252_04405 PF03466 LysR substrate binding domain DY252_04405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_04415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DY252_04415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DY252_04420 PF00171 Aldehyde dehydrogenase family DY252_04430 PF03167 Uracil DNA glycosylase superfamily DY252_04435 PF01464 Transglycosylase SLT domain DY252_04450 PF03918 Cytochrome C biogenesis protein DY252_04455 PF08534 Redoxin DY252_04460 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DY252_04460 PF01578 Cytochrome C assembly protein DY252_04465 PF03100 CcmE DY252_04475 PF01578 Cytochrome C assembly protein DY252_04480 PF03379 CcmB protein DY252_04485 PF00005 ABC transporter DY252_04495 PF00209 Sodium:neurotransmitter symporter family DY252_04500 PF03707 Bacterial signalling protein N terminal repeat DY252_04500 PF00990 Diguanylate cyclase, GGDEF domain DY252_04500 PF00563 EAL domain DY252_04505 PF00694 Aconitase C-terminal domain DY252_04505 PF00330 Aconitase family (aconitate hydratase) DY252_04515 PF00005 ABC transporter DY252_04515 PF12399 Branched-chain amino acid ATP-binding cassette transporter DY252_04520 PF00501 AMP-binding enzyme DY252_04525 PF02653 Branched-chain amino acid transport system / permease component DY252_04540 PF00005 ABC transporter DY252_04545 PF14535 AMP-binding enzyme C-terminal domain DY252_04545 PF00501 AMP-binding enzyme DY252_04550 PF03773 Predicted permease DY252_04560 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DY252_04560 PF00361 Proton-conducting membrane transporter DY252_04560 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DY252_04560 PF13244 Domain of unknown function (DUF4040) DY252_04565 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DY252_04570 PF00361 Proton-conducting membrane transporter DY252_04575 PF01899 Na+/H+ ion antiporter subunit DY252_04580 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DY252_04585 PF03334 Na+/H+ antiporter subunit DY252_04590 PF01351 Ribonuclease HII DY252_04600 PF00472 RF-1 domain DY252_04605 PF04304 Protein of unknown function (DUF454) DY252_04615 PF00360 Phytochrome region DY252_04615 PF08446 PAS fold DY252_04615 PF00512 His Kinase A (phospho-acceptor) domain DY252_04615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_04615 PF01590 GAF domain DY252_04625 PF00072 Response regulator receiver domain DY252_04630 PF03707 Bacterial signalling protein N terminal repeat DY252_04630 PF00990 Diguanylate cyclase, GGDEF domain DY252_04630 PF00563 EAL domain DY252_04635 PF11953 Domain of unknown function (DUF3470) DY252_04635 PF00037 4Fe-4S binding domain DY252_04650 PF01435 Peptidase family M48 DY252_04660 PF00561 alpha/beta hydrolase fold DY252_04675 PF04209 homogentisate 1,2-dioxygenase DY252_04690 PF03466 LysR substrate binding domain DY252_04690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_04695 PF02770 Acyl-CoA dehydrogenase, middle domain DY252_04695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DY252_04695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DY252_04700 PF02515 CoA-transferase family III DY252_04705 PF00005 ABC transporter DY252_04705 PF08402 TOBE domain DY252_04710 PF00528 Binding-protein-dependent transport system inner membrane component DY252_04715 PF00528 Binding-protein-dependent transport system inner membrane component DY252_04720 PF13416 Bacterial extracellular solute-binding protein DY252_04730 PF08546 Ketopantoate reductase PanE/ApbA C terminal DY252_04730 PF02558 Ketopantoate reductase PanE/ApbA DY252_04740 PF14525 AraC-binding-like domain DY252_04740 PF12833 Helix-turn-helix domain DY252_04760 PF12833 Helix-turn-helix domain DY252_04760 PF02311 AraC-like ligand binding domain DY252_04770 PF00149 Calcineurin-like phosphoesterase DY252_04770 PF02872 5'-nucleotidase, C-terminal domain DY252_04785 PF01642 Methylmalonyl-CoA mutase DY252_04785 PF02310 B12 binding domain DY252_04805 PF00563 EAL domain DY252_04805 PF00990 Diguanylate cyclase, GGDEF domain DY252_04805 PF03707 Bacterial signalling protein N terminal repeat DY252_04805 PF13188 PAS domain DY252_04810 PF01551 Peptidase family M23 DY252_04820 PF01209 ubiE/COQ5 methyltransferase family DY252_04825 PF01575 MaoC like domain DY252_04830 PF01687 Riboflavin kinase DY252_04830 PF06574 FAD synthetase DY252_04835 PF00133 tRNA synthetases class I (I, L, M and V) DY252_04835 PF08264 Anticodon-binding domain of tRNA DY252_04840 PF01252 Signal peptidase (SPase) II DY252_04850 PF05193 Peptidase M16 inactive domain DY252_04850 PF00675 Insulinase (Peptidase family M16) DY252_04855 PF05193 Peptidase M16 inactive domain DY252_04860 PF08676 MutL C terminal dimerisation domain DY252_04860 PF01119 DNA mismatch repair protein, C-terminal domain DY252_04875 PF00691 OmpA family DY252_04875 PF13677 Membrane MotB of proton-channel complex MotA/MotB DY252_04880 PF01618 MotA/TolQ/ExbB proton channel family DY252_04890 PF04954 Siderophore-interacting protein DY252_04890 PF08021 Siderophore-interacting FAD-binding domain DY252_04895 PF00950 ABC 3 transport family DY252_04900 PF00950 ABC 3 transport family DY252_04905 PF00005 ABC transporter DY252_04910 PF01297 Zinc-uptake complex component A periplasmic DY252_04915 PF02742 Iron dependent repressor, metal binding and dimerisation domain DY252_04915 PF01325 Iron dependent repressor, N-terminal DNA binding domain DY252_04925 PF02350 UDP-N-acetylglucosamine 2-epimerase DY252_04930 PF08485 Polysaccharide biosynthesis protein C-terminal DY252_04930 PF02719 Polysaccharide biosynthesis protein DY252_04935 PF02911 Formyl transferase, C-terminal domain DY252_04935 PF00551 Formyl transferase DY252_04935 PF01370 NAD dependent epimerase/dehydratase family DY252_04940 PF00977 Histidine biosynthesis protein DY252_04945 PF00117 Glutamine amidotransferase class-I DY252_04965 PF00733 Asparagine synthase DY252_04965 PF13537 Glutamine amidotransferase domain DY252_04970 PF00534 Glycosyl transferases group 1 DY252_04970 PF13439 Glycosyltransferase Family 4 DY252_04995 PF00202 Aminotransferase class-III DY252_05005 PF02719 Polysaccharide biosynthesis protein DY252_05010 PF08666 SAF domain DY252_05010 PF03102 NeuB family DY252_05015 PF00664 ABC transporter transmembrane region DY252_05015 PF00005 ABC transporter DY252_05020 PF01370 NAD dependent epimerase/dehydratase family DY252_05030 PF00829 Ribosomal prokaryotic L21 protein DY252_05035 PF01016 Ribosomal L27 protein DY252_05040 PF01018 GTP1/OBG DY252_05040 PF01926 50S ribosome-binding GTPase DY252_05045 PF01472 PUA domain DY252_05045 PF00696 Amino acid kinase family DY252_05050 PF01381 Helix-turn-helix DY252_05060 PF07879 PHB/PHA accumulation regulator DNA-binding domain DY252_05060 PF05233 PHB accumulation regulatory domain DY252_05070 PF00561 alpha/beta hydrolase fold DY252_05080 PF01037 Lrp/AsnC ligand binding domain DY252_05095 PF00394 Multicopper oxidase DY252_05095 PF07731 Multicopper oxidase DY252_05095 PF07732 Multicopper oxidase DY252_05105 PF02803 Thiolase, C-terminal domain DY252_05105 PF00108 Thiolase, N-terminal domain DY252_05120 PF03466 LysR substrate binding domain DY252_05120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_05130 PF00005 ABC transporter DY252_05135 PF02653 Branched-chain amino acid transport system / permease component DY252_05140 PF13407 Periplasmic binding protein domain DY252_05150 PF16123 Hydroxyacylglutathione hydrolase C-terminus DY252_05150 PF00753 Metallo-beta-lactamase superfamily DY252_05165 PF02167 Cytochrome C1 family DY252_05170 PF00033 Cytochrome b/b6/petB DY252_05170 PF00032 Cytochrome b(C-terminal)/b6/petD DY252_05175 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DY252_05175 PF00355 Rieske [2Fe-2S] domain DY252_05180 PF00588 SpoU rRNA Methylase family DY252_05185 PF01218 Coproporphyrinogen III oxidase DY252_05190 PF05016 ParE toxin of type II toxin-antitoxin system, parDE DY252_05195 PF09386 Antitoxin ParD DY252_05210 PF03466 LysR substrate binding domain DY252_05210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_05215 PF00884 Sulfatase DY252_05215 PF12411 Choline sulfatase enzyme C terminal DY252_05220 PF02028 BCCT, betaine/carnitine/choline family transporter DY252_05225 PF01965 DJ-1/PfpI family DY252_05235 PF01063 Amino-transferase class IV DY252_05240 PF12802 MarR family DY252_05245 PF00486 Transcriptional regulatory protein, C terminal DY252_05245 PF00072 Response regulator receiver domain DY252_05250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_05250 PF00512 His Kinase A (phospho-acceptor) domain DY252_05250 PF00672 HAMP domain DY252_05260 PF00970 Oxidoreductase FAD-binding domain DY252_05260 PF00175 Oxidoreductase NAD-binding domain DY252_05265 PF13426 PAS domain DY252_05265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_05265 PF08447 PAS fold DY252_05270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_05270 PF08447 PAS fold DY252_05270 PF13426 PAS domain DY252_05275 PF01588 Putative tRNA binding domain DY252_05285 PF00440 Bacterial regulatory proteins, tetR family DY252_05285 PF13977 BetI-type transcriptional repressor, C-terminal DY252_05290 PF03807 NADP oxidoreductase coenzyme F420-dependent DY252_05290 PF14748 Pyrroline-5-carboxylate reductase dimerisation DY252_05305 PF01370 NAD dependent epimerase/dehydratase family DY252_05310 PF01790 Prolipoprotein diacylglyceryl transferase DY252_05330 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DY252_05330 PF14572 Phosphoribosyl synthetase-associated domain DY252_05335 PF01386 Ribosomal L25p family DY252_05335 PF14693 Ribosomal protein TL5, C-terminal domain DY252_05340 PF01195 Peptidyl-tRNA hydrolase DY252_05345 PF01926 50S ribosome-binding GTPase DY252_05345 PF06071 Protein of unknown function (DUF933) DY252_05350 PF00117 Glutamine amidotransferase class-I DY252_05350 PF00958 GMP synthase C terminal domain DY252_05355 PF10649 Protein of unknown function (DUF2478) DY252_05355 PF03459 TOBE domain DY252_05355 PF00005 ABC transporter DY252_05360 PF00107 Zinc-binding dehydrogenase DY252_05360 PF08240 Alcohol dehydrogenase GroES-like domain DY252_05370 PF03466 LysR substrate binding domain DY252_05370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_05375 PF00578 AhpC/TSA family DY252_05380 PF02627 Carboxymuconolactone decarboxylase family DY252_05385 PF01970 Tripartite tricarboxylate transporter TctA family DY252_05400 PF00486 Transcriptional regulatory protein, C terminal DY252_05400 PF00072 Response regulator receiver domain DY252_05405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_05405 PF00672 HAMP domain DY252_05405 PF00512 His Kinase A (phospho-acceptor) domain DY252_05425 PF17757 UvrB interaction domain DY252_05425 PF12344 Ultra-violet resistance protein B DY252_05425 PF02151 UvrB/uvrC motif DY252_05425 PF04851 Type III restriction enzyme, res subunit DY252_05425 PF00271 Helicase conserved C-terminal domain DY252_05430 PF00174 Oxidoreductase molybdopterin binding domain DY252_05435 PF03466 LysR substrate binding domain DY252_05435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_05440 PF07286 Protein of unknown function (DUF1445) DY252_05455 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_05465 PF01425 Amidase DY252_05470 PF00175 Oxidoreductase NAD-binding domain DY252_05470 PF00111 2Fe-2S iron-sulfur cluster binding domain DY252_05485 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_05490 PF00210 Ferritin-like domain DY252_05495 PF02743 Cache domain DY252_05495 PF00211 Adenylate and Guanylate cyclase catalytic domain DY252_05495 PF00672 HAMP domain DY252_05500 PF03466 LysR substrate binding domain DY252_05500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_05505 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_05510 PF01037 Lrp/AsnC ligand binding domain DY252_05515 PF01435 Peptidase family M48 DY252_05530 PF03449 Transcription elongation factor, N-terminal DY252_05530 PF01272 Transcription elongation factor, GreA/GreB, C-term DY252_05535 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DY252_05535 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DY252_05535 PF02142 MGS-like domain DY252_05540 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DY252_05540 PF00117 Glutamine amidotransferase class-I DY252_05545 PF09424 Yqey-like protein DY252_05550 PF08275 DNA primase catalytic core, N-terminal domain DY252_05550 PF13662 Toprim domain DY252_05550 PF08278 DNA primase DnaG DnaB-binding DY252_05550 PF01807 CHC2 zinc finger DY252_05550 PF10410 DnaB-helicase binding domain of primase DY252_05555 PF04545 Sigma-70, region 4 DY252_05555 PF04539 Sigma-70 region 3 DY252_05555 PF03979 Sigma-70 factor, region 1.1 DY252_05555 PF04546 Sigma-70, non-essential region DY252_05555 PF04542 Sigma-70 region 2 DY252_05555 PF00140 Sigma-70 factor, region 1.2 DY252_05635 PF10548 P22AR C-terminal domain DY252_05635 PF08346 AntA/AntB antirepressor DY252_05830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DY252_05830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DY252_05835 PF13419 Haloacid dehalogenase-like hydrolase DY252_05840 PF00005 ABC transporter DY252_05840 PF03459 TOBE domain DY252_05840 PF17912 MalK OB fold domain DY252_05845 PF00107 Zinc-binding dehydrogenase DY252_05845 PF08240 Alcohol dehydrogenase GroES-like domain DY252_05855 PF00528 Binding-protein-dependent transport system inner membrane component DY252_05860 PF00528 Binding-protein-dependent transport system inner membrane component DY252_05870 PF04198 Putative sugar-binding domain DY252_05880 PF00106 short chain dehydrogenase DY252_05885 PF03459 TOBE domain DY252_05885 PF10649 Protein of unknown function (DUF2478) DY252_05885 PF00005 ABC transporter DY252_05890 PF00484 Carbonic anhydrase DY252_05895 PF00639 PPIC-type PPIASE domain DY252_05895 PF09312 SurA N-terminal domain DY252_05900 PF02665 Nitrate reductase gamma subunit DY252_05905 PF02613 Nitrate reductase delta subunit DY252_05910 PF13247 4Fe-4S dicluster domain DY252_05910 PF14711 Respiratory nitrate reductase beta C-terminal DY252_05915 PF14710 Respiratory nitrate reductase alpha N-terminal DY252_05915 PF01568 Molydopterin dinucleotide binding domain DY252_05915 PF00384 Molybdopterin oxidoreductase DY252_05920 PF07690 Major Facilitator Superfamily DY252_05930 PF02627 Carboxymuconolactone decarboxylase family DY252_05950 PF04405 Domain of Unknown function (DUF542) DY252_05950 PF01814 Hemerythrin HHE cation binding domain DY252_05960 PF13545 Crp-like helix-turn-helix domain DY252_05960 PF00027 Cyclic nucleotide-binding domain DY252_05970 PF05573 NosL DY252_05975 PF12679 ABC-2 family transporter protein DY252_05980 PF00005 ABC transporter DY252_05985 PF05048 Periplasmic copper-binding protein (NosD) DY252_05990 PF18764 Nitrous oxide reductase propeller repeat DY252_05990 PF18793 Nitrous oxide reductase propeller repeat 2 DY252_05990 PF13473 Cupredoxin-like domain DY252_05995 PF04205 FMN-binding domain DY252_05995 PF12801 4Fe-4S binding domain DY252_06005 PF00356 Bacterial regulatory proteins, lacI family DY252_06020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DY252_06020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DY252_06025 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DY252_06030 PF00005 ABC transporter DY252_06035 PF02653 Branched-chain amino acid transport system / permease component DY252_06040 PF00005 ABC transporter DY252_06045 PF02653 Branched-chain amino acid transport system / permease component DY252_06085 PF13545 Crp-like helix-turn-helix domain DY252_06085 PF00027 Cyclic nucleotide-binding domain DY252_06100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DY252_06100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DY252_06110 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DY252_06110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DY252_06120 PF02653 Branched-chain amino acid transport system / permease component DY252_06125 PF00005 ABC transporter DY252_06130 PF00294 pfkB family carbohydrate kinase DY252_06135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DY252_06135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DY252_06135 PF00205 Thiamine pyrophosphate enzyme, central domain DY252_06140 PF01261 Xylose isomerase-like TIM barrel DY252_06145 PF04962 KduI/IolB family DY252_06150 PF14824 Sirohaem biosynthesis protein central DY252_06150 PF10414 Sirohaem synthase dimerisation region DY252_06150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DY252_06155 PF00384 Molybdopterin oxidoreductase DY252_06155 PF01568 Molydopterin dinucleotide binding domain DY252_06155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DY252_06155 PF04324 BFD-like [2Fe-2S] binding domain DY252_06160 PF00355 Rieske [2Fe-2S] domain DY252_06165 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DY252_06165 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_06165 PF18267 Rubredoxin NAD+ reductase C-terminal domain DY252_06165 PF04324 BFD-like [2Fe-2S] binding domain DY252_06165 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DY252_06175 PF07690 Major Facilitator Superfamily DY252_06180 PF00072 Response regulator receiver domain DY252_06180 PF03861 ANTAR domain DY252_06185 PF00005 ABC transporter DY252_06195 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DY252_06200 PF03466 LysR substrate binding domain DY252_06200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_06205 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DY252_06205 PF00355 Rieske [2Fe-2S] domain DY252_06210 PF00175 Oxidoreductase NAD-binding domain DY252_06210 PF00111 2Fe-2S iron-sulfur cluster binding domain DY252_06210 PF00970 Oxidoreductase FAD-binding domain DY252_06215 PF13358 DDE superfamily endonuclease DY252_06220 PF12833 Helix-turn-helix domain DY252_06225 PF01266 FAD dependent oxidoreductase DY252_06230 PF04267 Sarcosine oxidase, delta subunit family DY252_06235 PF17806 Sarcosine oxidase A3 domain DY252_06235 PF01571 Aminomethyltransferase folate-binding domain DY252_06235 PF08669 Glycine cleavage T-protein C-terminal barrel domain DY252_06235 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_06245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_06245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DY252_06255 PF00005 ABC transporter DY252_06255 PF03459 TOBE domain DY252_06260 PF00528 Binding-protein-dependent transport system inner membrane component DY252_06275 PF00929 Exonuclease DY252_06280 PF00571 CBS domain DY252_06280 PF01380 SIS domain DY252_06285 PF00474 Sodium:solute symporter family DY252_06295 PF00005 ABC transporter DY252_06295 PF12848 ABC transporter DY252_06305 PF04333 MlaA lipoprotein DY252_06310 PF01209 ubiE/COQ5 methyltransferase family DY252_06315 PF02219 Methylenetetrahydrofolate reductase DY252_06320 PF02574 Homocysteine S-methyltransferase DY252_06320 PF00809 Pterin binding enzyme DY252_06320 PF02965 Vitamin B12 dependent methionine synthase, activation domain DY252_06320 PF02310 B12 binding domain DY252_06320 PF02607 B12 binding domain DY252_06325 PF02574 Homocysteine S-methyltransferase DY252_06325 PF02965 Vitamin B12 dependent methionine synthase, activation domain DY252_06325 PF02607 B12 binding domain DY252_06325 PF02310 B12 binding domain DY252_06325 PF00809 Pterin binding enzyme DY252_06330 PF07690 Major Facilitator Superfamily DY252_06335 PF00654 Voltage gated chloride channel DY252_06345 PF02350 UDP-N-acetylglucosamine 2-epimerase DY252_06350 PF13361 UvrD-like helicase C-terminal domain DY252_06350 PF00580 UvrD/REP helicase N-terminal domain DY252_06365 PF00072 Response regulator receiver domain DY252_06370 PF13188 PAS domain DY252_06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_06370 PF00512 His Kinase A (phospho-acceptor) domain DY252_06370 PF00072 Response regulator receiver domain DY252_06370 PF08448 PAS fold DY252_06385 PF00557 Metallopeptidase family M24 DY252_06385 PF01321 Creatinase/Prolidase N-terminal domain DY252_06390 PF00248 Aldo/keto reductase family DY252_06395 PF03466 LysR substrate binding domain DY252_06395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_06400 PF00892 EamA-like transporter family DY252_06415 PF00533 BRCA1 C Terminus (BRCT) domain DY252_06415 PF01653 NAD-dependent DNA ligase adenylation domain DY252_06415 PF12826 Helix-hairpin-helix motif DY252_06415 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DY252_06415 PF03120 NAD-dependent DNA ligase OB-fold domain DY252_06420 PF02463 RecF/RecN/SMC N terminal domain DY252_06425 PF13525 Outer membrane lipoprotein DY252_06430 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DY252_06435 PF12327 FtsZ family, C-terminal domain DY252_06435 PF00091 Tubulin/FtsZ family, GTPase domain DY252_06440 PF02491 SHS2 domain inserted in FTSA DY252_06445 PF08478 POTRA domain, FtsQ-type DY252_06445 PF03799 Cell division protein FtsQ DY252_06450 PF07478 D-ala D-ala ligase C-terminus DY252_06450 PF01820 D-ala D-ala ligase N-terminus DY252_06455 PF01565 FAD binding domain DY252_06455 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DY252_06460 PF02875 Mur ligase family, glutamate ligase domain DY252_06460 PF08245 Mur ligase middle domain DY252_06460 PF01225 Mur ligase family, catalytic domain DY252_06465 PF03033 Glycosyltransferase family 28 N-terminal domain DY252_06465 PF04101 Glycosyltransferase family 28 C-terminal domain DY252_06470 PF01098 Cell cycle protein DY252_06475 PF08245 Mur ligase middle domain DY252_06480 PF00953 Glycosyl transferase family 4 DY252_06485 PF08245 Mur ligase middle domain DY252_06485 PF01225 Mur ligase family, catalytic domain DY252_06485 PF02875 Mur ligase family, glutamate ligase domain DY252_06490 PF01225 Mur ligase family, catalytic domain DY252_06490 PF02875 Mur ligase family, glutamate ligase domain DY252_06490 PF08245 Mur ligase middle domain DY252_06495 PF03717 Penicillin-binding Protein dimerisation domain DY252_06495 PF03793 PASTA domain DY252_06495 PF00905 Penicillin binding protein transpeptidase domain DY252_06505 PF01795 MraW methylase family DY252_06510 PF02381 MraZ protein, putative antitoxin-like DY252_06525 PF01544 CorA-like Mg2+ transporter protein DY252_06530 PF00857 Isochorismatase family DY252_06545 PF01510 N-acetylmuramoyl-L-alanine amidase DY252_06560 PF00226 DnaJ domain DY252_06560 PF05099 Tellurite resistance protein TerB DY252_06565 PF00672 HAMP domain DY252_06565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_06570 PF00672 HAMP domain DY252_06570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_06595 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_06600 PF05378 Hydantoinase/oxoprolinase N-terminal region DY252_06600 PF01968 Hydantoinase/oxoprolinase DY252_06605 PF01645 Conserved region in glutamate synthase DY252_06610 PF09857 Putative toxin of bacterial toxin-antitoxin pair DY252_06615 PF00583 Acetyltransferase (GNAT) family DY252_06630 PF01565 FAD binding domain DY252_06630 PF02913 FAD linked oxidases, C-terminal domain DY252_06650 PF05170 AsmA family DY252_06655 PF01384 Phosphate transporter family DY252_06660 PF02592 Putative vitamin uptake transporter DY252_06665 PF02547 Queuosine biosynthesis protein DY252_06670 PF01702 Queuine tRNA-ribosyltransferase DY252_06675 PF14489 QueF-like protein DY252_06680 PF08331 Domain of unknown function (DUF1730) DY252_06685 PF00149 Calcineurin-like phosphoesterase DY252_06695 PF13537 Glutamine amidotransferase domain DY252_06695 PF00733 Asparagine synthase DY252_06700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_06700 PF00672 HAMP domain DY252_06700 PF00512 His Kinase A (phospho-acceptor) domain DY252_06700 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DY252_06700 PF00072 Response regulator receiver domain DY252_06700 PF01627 Hpt domain DY252_06710 PF00202 Aminotransferase class-III DY252_06715 PF05853 beta-keto acid cleavage enzyme DY252_06730 PF00582 Universal stress protein family DY252_06740 PF03781 Sulfatase-modifying factor enzyme 1 DY252_06750 PF00034 Cytochrome c DY252_06760 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_06770 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_06785 PF00348 Polyprenyl synthetase DY252_06795 PF17827 PrmC N-terminal domain DY252_06795 PF13847 Methyltransferase domain DY252_06805 PF02091 Glycyl-tRNA synthetase alpha subunit DY252_06810 PF02092 Glycyl-tRNA synthetase beta subunit DY252_06810 PF05746 DALR anticodon binding domain DY252_06815 PF02896 PEP-utilising enzyme, TIM barrel domain DY252_06815 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DY252_06815 PF00391 PEP-utilising enzyme, mobile domain DY252_06825 PF01571 Aminomethyltransferase folate-binding domain DY252_06840 PF00733 Asparagine synthase DY252_06840 PF13537 Glutamine amidotransferase domain DY252_06850 PF06803 Protein of unknown function (DUF1232) DY252_06855 PF00107 Zinc-binding dehydrogenase DY252_06860 PF00072 Response regulator receiver domain DY252_06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_06860 PF00512 His Kinase A (phospho-acceptor) domain DY252_06860 PF08448 PAS fold DY252_06860 PF13188 PAS domain DY252_06865 PF00196 Bacterial regulatory proteins, luxR family DY252_06865 PF00072 Response regulator receiver domain DY252_06875 PF01370 NAD dependent epimerase/dehydratase family DY252_06890 PF00692 dUTPase DY252_06895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DY252_06900 PF01634 ATP phosphoribosyltransferase DY252_06905 PF00815 Histidinol dehydrogenase DY252_06910 PF06793 Uncharacterised protein family (UPF0262) DY252_06915 PF01451 Low molecular weight phosphotyrosine protein phosphatase DY252_06920 PF00583 Acetyltransferase (GNAT) family DY252_06925 PF01176 Translation initiation factor 1A / IF-1 DY252_06930 PF02545 Maf-like protein DY252_06935 PF00575 S1 RNA binding domain DY252_06935 PF10150 Ribonuclease E/G family DY252_06935 PF12111 Polyribonucleotide phosphorylase C terminal DY252_06940 PF03884 DNA gyrase inhibitor YacG DY252_06965 PF00875 DNA photolyase DY252_06965 PF03441 FAD binding domain of DNA photolyase DY252_06970 PF00392 Bacterial regulatory proteins, gntR family DY252_06970 PF00155 Aminotransferase class I and II DY252_06980 PF04227 Indigoidine synthase A like protein DY252_06985 PF07690 Major Facilitator Superfamily DY252_06990 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DY252_06990 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DY252_06995 PF10369 Small subunit of acetolactate synthase DY252_07000 PF00205 Thiamine pyrophosphate enzyme, central domain DY252_07000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DY252_07000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DY252_07015 PF13180 PDZ domain DY252_07030 PF01145 SPFH domain / Band 7 family DY252_07030 PF12221 Bacterial membrane protein N terminal DY252_07035 PF10609 NUBPL iron-transfer P-loop NTPase DY252_07045 PF00586 AIR synthase related protein, N-terminal domain DY252_07045 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DY252_07045 PF02769 AIR synthase related protein, C-terminal domain DY252_07055 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DY252_07060 PF01259 SAICAR synthetase DY252_07075 PF00072 Response regulator receiver domain DY252_07075 PF00196 Bacterial regulatory proteins, luxR family DY252_07080 PF00117 Glutamine amidotransferase class-I DY252_07080 PF06418 CTP synthase N-terminus DY252_07085 PF00892 EamA-like transporter family DY252_07090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_07090 PF03466 LysR substrate binding domain DY252_07095 PF01161 Phosphatidylethanolamine-binding protein DY252_07100 PF00206 Lyase DY252_07100 PF10397 Adenylosuccinate lyase C-terminus DY252_07110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_07110 PF00005 ABC transporter DY252_07115 PF00005 ABC transporter DY252_07115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_07120 PF12911 N-terminal TM domain of oligopeptide transport permease C DY252_07120 PF00528 Binding-protein-dependent transport system inner membrane component DY252_07125 PF00528 Binding-protein-dependent transport system inner membrane component DY252_07130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DY252_07145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DY252_07150 PF04002 RadC-like JAB domain DY252_07155 PF00557 Metallopeptidase family M24 DY252_07160 PF17746 SfsA N-terminal OB domain DY252_07160 PF03749 Sugar fermentation stimulation protein RE domain DY252_07170 PF08241 Methyltransferase domain DY252_07175 PF00175 Oxidoreductase NAD-binding domain DY252_07175 PF00042 Globin DY252_07175 PF00970 Oxidoreductase FAD-binding domain DY252_07180 PF02798 Glutathione S-transferase, N-terminal domain DY252_07185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_07185 PF03466 LysR substrate binding domain DY252_07190 PF00156 Phosphoribosyl transferase domain DY252_07195 PF00462 Glutaredoxin DY252_07210 PF00795 Carbon-nitrogen hydrolase DY252_07245 PF13840 ACT domain DY252_07245 PF01842 ACT domain DY252_07245 PF00696 Amino acid kinase family DY252_07250 PF03060 Nitronate monooxygenase DY252_07255 PF01590 GAF domain DY252_07255 PF02896 PEP-utilising enzyme, TIM barrel domain DY252_07255 PF00391 PEP-utilising enzyme, mobile domain DY252_07255 PF05524 PEP-utilising enzyme, N-terminal DY252_07265 PF04551 GcpE protein DY252_07275 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DY252_07275 PF01488 Shikimate / quinate 5-dehydrogenase DY252_07275 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DY252_07280 PF00472 RF-1 domain DY252_07280 PF03462 PCRF domain DY252_07285 PF13847 Methyltransferase domain DY252_07285 PF17827 PrmC N-terminal domain DY252_07305 PF10431 C-terminal, D2-small domain, of ClpB protein DY252_07305 PF02861 Clp amino terminal domain, pathogenicity island component DY252_07305 PF17871 AAA lid domain DY252_07305 PF07724 AAA domain (Cdc48 subfamily) DY252_07305 PF00004 ATPase family associated with various cellular activities (AAA) DY252_07320 PF00501 AMP-binding enzyme DY252_07330 PF03109 ABC1 family DY252_07335 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DY252_07335 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DY252_07340 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DY252_07345 PF02233 NAD(P) transhydrogenase beta subunit DY252_07350 PF02463 RecF/RecN/SMC N terminal domain DY252_07365 PF01165 Ribosomal protein S21 DY252_07380 PF01327 Polypeptide deformylase DY252_07395 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DY252_07395 PF02222 ATP-grasp domain DY252_07400 PF00731 AIR carboxylase DY252_07415 PF00365 Phosphofructokinase DY252_07425 PF02441 Flavoprotein DY252_07435 PF13193 AMP-binding enzyme C-terminal domain DY252_07435 PF16177 Acetyl-coenzyme A synthetase N-terminus DY252_07435 PF00501 AMP-binding enzyme DY252_07445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_07445 PF03466 LysR substrate binding domain DY252_07450 PF00455 DeoR C terminal sensor domain DY252_07450 PF08220 DeoR-like helix-turn-helix domain DY252_07460 PF08240 Alcohol dehydrogenase GroES-like domain DY252_07460 PF00550 Phosphopantetheine attachment site DY252_07460 PF00698 Acyl transferase domain DY252_07460 PF00107 Zinc-binding dehydrogenase DY252_07460 PF16197 Ketoacyl-synthetase C-terminal extension DY252_07460 PF02801 Beta-ketoacyl synthase, C-terminal domain DY252_07460 PF14765 Polyketide synthase dehydratase DY252_07460 PF08659 KR domain DY252_07460 PF00109 Beta-ketoacyl synthase, N-terminal domain DY252_07475 PF00211 Adenylate and Guanylate cyclase catalytic domain DY252_07480 PF01197 Ribosomal protein L31 DY252_07485 PF01491 Frataxin-like domain DY252_07490 PF00664 ABC transporter transmembrane region DY252_07490 PF00005 ABC transporter DY252_07495 PF08525 Opacity-associated protein A N-terminal motif DY252_07495 PF01476 LysM domain DY252_07495 PF01551 Peptidase family M23 DY252_07535 PF02082 Transcriptional regulator DY252_07545 PF00528 Binding-protein-dependent transport system inner membrane component DY252_07550 PF00528 Binding-protein-dependent transport system inner membrane component DY252_07555 PF00005 ABC transporter DY252_07555 PF12857 TOBE-like domain DY252_07560 PF02080 TrkA-C domain DY252_07560 PF03600 Citrate transporter DY252_07575 PF01494 FAD binding domain DY252_07580 PF00158 Sigma-54 interaction domain DY252_07585 PF00005 ABC transporter DY252_07590 PF00528 Binding-protein-dependent transport system inner membrane component DY252_07595 PF00296 Luciferase-like monooxygenase DY252_07600 PF09084 NMT1/THI5 like DY252_07605 PF03358 NADPH-dependent FMN reductase DY252_07610 PF03600 Citrate transporter DY252_07610 PF02080 TrkA-C domain DY252_07620 PF02417 Chromate transporter DY252_07625 PF10114 Sensory domain found in PocR DY252_07625 PF12833 Helix-turn-helix domain DY252_07635 PF18818 Metallopeptidase superfamily domain DY252_07635 PF08401 Domain of unknown function (DUF1738) DY252_07645 PF02195 ParB-like nuclease domain DY252_07645 PF17762 HTH domain found in ParB protein DY252_07675 PF10502 Signal peptidase, peptidase S26 DY252_07680 PF01464 Transglycosylase SLT domain DY252_07695 PF02534 Type IV secretory system Conjugative DNA transfer DY252_07710 PF00437 Type II/IV secretion system protein DY252_07725 PF03135 CagE, TrbE, VirB family, component of type IV transporter system DY252_07750 PF03743 Bacterial conjugation TrbI-like protein DY252_07795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DY252_07795 PF00378 Enoyl-CoA hydratase/isomerase DY252_07795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DY252_07805 PF01494 FAD binding domain DY252_07810 PF00106 short chain dehydrogenase DY252_07820 PF00378 Enoyl-CoA hydratase/isomerase DY252_07830 PF13193 AMP-binding enzyme C-terminal domain DY252_07830 PF00501 AMP-binding enzyme DY252_07835 PF00266 Aminotransferase class-V DY252_07840 PF03301 Tryptophan 2,3-dioxygenase DY252_07850 PF02653 Branched-chain amino acid transport system / permease component DY252_07860 PF00005 ABC transporter DY252_07865 PF00005 ABC transporter DY252_07880 PF00528 Binding-protein-dependent transport system inner membrane component DY252_07885 PF00528 Binding-protein-dependent transport system inner membrane component DY252_07890 PF08402 TOBE domain DY252_07890 PF00005 ABC transporter DY252_07900 PF00392 Bacterial regulatory proteins, gntR family DY252_07900 PF00155 Aminotransferase class I and II DY252_07905 PF00202 Aminotransferase class-III DY252_07915 PF00106 short chain dehydrogenase DY252_07920 PF02954 Bacterial regulatory protein, Fis family DY252_07920 PF00158 Sigma-54 interaction domain DY252_07920 PF00072 Response regulator receiver domain DY252_07925 PF00989 PAS fold DY252_07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_07925 PF00512 His Kinase A (phospho-acceptor) domain DY252_07925 PF08447 PAS fold DY252_07935 PF07690 Major Facilitator Superfamily DY252_07940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_07940 PF03466 LysR substrate binding domain DY252_07950 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DY252_07950 PF00037 4Fe-4S binding domain DY252_07950 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DY252_07955 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DY252_07955 PF00037 4Fe-4S binding domain DY252_07955 PF01568 Molydopterin dinucleotide binding domain DY252_07955 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DY252_07955 PF00384 Molybdopterin oxidoreductase DY252_07965 PF02634 FdhD/NarQ family DY252_07970 PF00701 Dihydrodipicolinate synthetase family DY252_07975 PF07729 FCD domain DY252_07975 PF00392 Bacterial regulatory proteins, gntR family DY252_07980 PF00920 Dehydratase family DY252_07985 PF03737 Aldolase/RraA DY252_07990 PF00171 Aldehyde dehydrogenase family DY252_07995 PF00480 ROK family DY252_08005 PF00005 ABC transporter DY252_08010 PF02653 Branched-chain amino acid transport system / permease component DY252_08015 PF13407 Periplasmic binding protein domain DY252_08025 PF00920 Dehydratase family DY252_08030 PF00551 Formyl transferase DY252_08035 PF00120 Glutamine synthetase, catalytic domain DY252_08040 PF01645 Conserved region in glutamate synthase DY252_08045 PF01493 GXGXG motif DY252_08060 PF01571 Aminomethyltransferase folate-binding domain DY252_08060 PF08669 Glycine cleavage T-protein C-terminal barrel domain DY252_08070 PF00111 2Fe-2S iron-sulfur cluster binding domain DY252_08070 PF00175 Oxidoreductase NAD-binding domain DY252_08070 PF00970 Oxidoreductase FAD-binding domain DY252_08085 PF08669 Glycine cleavage T-protein C-terminal barrel domain DY252_08085 PF01571 Aminomethyltransferase folate-binding domain DY252_08095 PF01965 DJ-1/PfpI family DY252_08095 PF12833 Helix-turn-helix domain DY252_08100 PF01266 FAD dependent oxidoreductase DY252_08105 PF04267 Sarcosine oxidase, delta subunit family DY252_08110 PF01571 Aminomethyltransferase folate-binding domain DY252_08110 PF17806 Sarcosine oxidase A3 domain DY252_08110 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_08110 PF08669 Glycine cleavage T-protein C-terminal barrel domain DY252_08125 PF01546 Peptidase family M20/M25/M40 DY252_08125 PF07687 Peptidase dimerisation domain DY252_08130 PF01513 ATP-NAD kinase DY252_08135 PF16925 Tetracyclin repressor-like, C-terminal domain DY252_08135 PF00440 Bacterial regulatory proteins, tetR family DY252_08145 PF04143 Sulphur transport DY252_08155 PF00270 DEAD/DEAH box helicase DY252_08155 PF00271 Helicase conserved C-terminal domain DY252_08160 PF00313 'Cold-shock' DNA-binding domain DY252_08165 PF07729 FCD domain DY252_08165 PF00392 Bacterial regulatory proteins, gntR family DY252_08175 PF00528 Binding-protein-dependent transport system inner membrane component DY252_08185 PF00005 ABC transporter DY252_08195 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DY252_08200 PF00171 Aldehyde dehydrogenase family DY252_08215 PF07683 Cobalamin synthesis protein cobW C-terminal domain DY252_08215 PF02492 CobW/HypB/UreG, nucleotide-binding domain DY252_08220 PF03073 TspO/MBR family DY252_08230 PF00672 HAMP domain DY252_08230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_08230 PF17200 Single Cache domain 2 DY252_08235 PF00043 Glutathione S-transferase, C-terminal domain DY252_08235 PF02798 Glutathione S-transferase, N-terminal domain DY252_08240 PF00043 Glutathione S-transferase, C-terminal domain DY252_08240 PF02798 Glutathione S-transferase, N-terminal domain DY252_08245 PF07690 Major Facilitator Superfamily DY252_08245 PF00083 Sugar (and other) transporter DY252_08250 PF06481 COX Aromatic Rich Motif DY252_08250 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DY252_08255 PF00115 Cytochrome C and Quinol oxidase polypeptide I DY252_08260 PF00510 Cytochrome c oxidase subunit III DY252_08265 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DY252_08270 PF02104 SURF1 family DY252_08280 PF14834 Glutathione S-transferase, C-terminal domain DY252_08280 PF02798 Glutathione S-transferase, N-terminal domain DY252_08290 PF13649 Methyltransferase domain DY252_08295 PF17922 Tetracyclin repressor-like, C-terminal domain DY252_08295 PF00440 Bacterial regulatory proteins, tetR family DY252_08300 PF00186 Dihydrofolate reductase DY252_08305 PF00303 Thymidylate synthase DY252_08325 PF05683 Fumarase C-terminus DY252_08325 PF05681 Fumarate hydratase (Fumerase) DY252_08335 PF00892 EamA-like transporter family DY252_08340 PF12729 Four helix bundle sensory module for signal transduction DY252_08340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_08340 PF00672 HAMP domain DY252_08345 PF05145 Transition state regulatory protein AbrB DY252_08370 PF00990 Diguanylate cyclase, GGDEF domain DY252_08370 PF00563 EAL domain DY252_08370 PF08447 PAS fold DY252_08370 PF08448 PAS fold DY252_08380 PF00072 Response regulator receiver domain DY252_08380 PF00990 Diguanylate cyclase, GGDEF domain DY252_08385 PF01740 STAS domain DY252_08390 PF02954 Bacterial regulatory protein, Fis family DY252_08390 PF00072 Response regulator receiver domain DY252_08390 PF00158 Sigma-54 interaction domain DY252_08395 PF00155 Aminotransferase class I and II DY252_08415 PF13407 Periplasmic binding protein domain DY252_08420 PF00990 Diguanylate cyclase, GGDEF domain DY252_08420 PF00072 Response regulator receiver domain DY252_08425 PF01098 Cell cycle protein DY252_08430 PF00905 Penicillin binding protein transpeptidase domain DY252_08430 PF03717 Penicillin-binding Protein dimerisation domain DY252_08440 PF04085 rod shape-determining protein MreC DY252_08455 PF08502 LeuA allosteric (dimerisation) domain DY252_08455 PF00682 HMGL-like DY252_08465 PF01810 LysE type translocator DY252_08480 PF00990 Diguanylate cyclase, GGDEF domain DY252_08490 PF00313 'Cold-shock' DNA-binding domain DY252_08495 PF01812 5-formyltetrahydrofolate cyclo-ligase family DY252_08515 PF02541 Ppx/GppA phosphatase family DY252_08520 PF01728 FtsJ-like methyltransferase DY252_08525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_08525 PF08447 PAS fold DY252_08530 PF00571 CBS domain DY252_08530 PF00478 IMP dehydrogenase / GMP reductase domain DY252_08535 PF01189 16S rRNA methyltransferase RsmB/F DY252_08535 PF01029 NusB family DY252_08545 PF00117 Glutamine amidotransferase class-I DY252_08545 PF00958 GMP synthase C terminal domain DY252_08545 PF02540 NAD synthase DY252_08575 PF13443 Cro/C1-type HTH DNA-binding domain DY252_08590 PF00403 Heavy-metal-associated domain DY252_08595 PF00294 pfkB family carbohydrate kinase DY252_08600 PF14031 Putative serine dehydratase domain DY252_08605 PF00497 Bacterial extracellular solute-binding proteins, family 3 DY252_08610 PF00528 Binding-protein-dependent transport system inner membrane component DY252_08615 PF00528 Binding-protein-dependent transport system inner membrane component DY252_08620 PF00005 ABC transporter DY252_08625 PF01042 Endoribonuclease L-PSP DY252_08665 PF00171 Aldehyde dehydrogenase family DY252_08670 PF12697 Alpha/beta hydrolase family DY252_08675 PF00293 NUDIX domain DY252_08695 PF01547 Bacterial extracellular solute-binding protein DY252_08700 PF00528 Binding-protein-dependent transport system inner membrane component DY252_08705 PF00528 Binding-protein-dependent transport system inner membrane component DY252_08710 PF00128 Alpha amylase, catalytic domain DY252_08715 PF00005 ABC transporter DY252_08715 PF17912 MalK OB fold domain DY252_08715 PF03459 TOBE domain DY252_08720 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DY252_08720 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DY252_08725 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DY252_08730 PF00920 Dehydratase family DY252_08735 PF02685 Glucokinase DY252_08740 PF01081 KDPG and KHG aldolase DY252_08755 PF04545 Sigma-70, region 4 DY252_08755 PF04542 Sigma-70 region 2 DY252_08780 PF01297 Zinc-uptake complex component A periplasmic DY252_08795 PF04293 SpoVR like protein DY252_08800 PF04285 Protein of unknown function (DUF444) DY252_08805 PF08298 PrkA AAA domain DY252_08805 PF06798 PrkA serine protein kinase C-terminal domain DY252_08810 PF00581 Rhodanese-like domain DY252_08820 PF01042 Endoribonuclease L-PSP DY252_08835 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_08840 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DY252_08845 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_08880 PF00588 SpoU rRNA Methylase family DY252_08880 PF08032 RNA 2'-O ribose methyltransferase substrate binding DY252_08895 PF03143 Elongation factor Tu C-terminal domain DY252_08895 PF03144 Elongation factor Tu domain 2 DY252_08895 PF00009 Elongation factor Tu GTP binding domain DY252_08905 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DY252_08910 PF02357 Transcription termination factor nusG DY252_08910 PF00467 KOW motif DY252_08915 PF03946 Ribosomal protein L11, N-terminal domain DY252_08915 PF00298 Ribosomal protein L11, RNA binding domain DY252_08920 PF00687 Ribosomal protein L1p/L10e family DY252_08925 PF00466 Ribosomal protein L10 DY252_08930 PF16320 Ribosomal protein L7/L12 dimerisation domain DY252_08930 PF00542 Ribosomal protein L7/L12 C-terminal domain DY252_08935 PF04565 RNA polymerase Rpb2, domain 3 DY252_08935 PF10385 RNA polymerase beta subunit external 1 domain DY252_08935 PF00562 RNA polymerase Rpb2, domain 6 DY252_08935 PF04561 RNA polymerase Rpb2, domain 2 DY252_08935 PF04563 RNA polymerase beta subunit DY252_08935 PF04560 RNA polymerase Rpb2, domain 7 DY252_08940 PF05000 RNA polymerase Rpb1, domain 4 DY252_08940 PF04983 RNA polymerase Rpb1, domain 3 DY252_08940 PF00623 RNA polymerase Rpb1, domain 2 DY252_08940 PF04998 RNA polymerase Rpb1, domain 5 DY252_08940 PF04997 RNA polymerase Rpb1, domain 1 DY252_08945 PF00164 Ribosomal protein S12/S23 DY252_08950 PF00177 Ribosomal protein S7p/S5e DY252_08955 PF00679 Elongation factor G C-terminus DY252_08955 PF03144 Elongation factor Tu domain 2 DY252_08955 PF00009 Elongation factor Tu GTP binding domain DY252_08955 PF03764 Elongation factor G, domain IV DY252_08955 PF14492 Elongation Factor G, domain II DY252_08960 PF03144 Elongation factor Tu domain 2 DY252_08960 PF03143 Elongation factor Tu C-terminal domain DY252_08960 PF00009 Elongation factor Tu GTP binding domain DY252_08965 PF00338 Ribosomal protein S10p/S20e DY252_08970 PF00297 Ribosomal protein L3 DY252_08975 PF00573 Ribosomal protein L4/L1 family DY252_08980 PF00276 Ribosomal protein L23 DY252_08985 PF00181 Ribosomal Proteins L2, RNA binding domain DY252_08985 PF03947 Ribosomal Proteins L2, C-terminal domain DY252_08990 PF00203 Ribosomal protein S19 DY252_08995 PF00237 Ribosomal protein L22p/L17e DY252_09000 PF00189 Ribosomal protein S3, C-terminal domain DY252_09000 PF07650 KH domain DY252_09005 PF00252 Ribosomal protein L16p/L10e DY252_09010 PF00831 Ribosomal L29 protein DY252_09015 PF00366 Ribosomal protein S17 DY252_09020 PF00238 Ribosomal protein L14p/L23e DY252_09025 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DY252_09025 PF00467 KOW motif DY252_09030 PF00281 Ribosomal protein L5 DY252_09030 PF00673 ribosomal L5P family C-terminus DY252_09035 PF00253 Ribosomal protein S14p/S29e DY252_09040 PF00410 Ribosomal protein S8 DY252_09045 PF00347 Ribosomal protein L6 DY252_09050 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DY252_09055 PF03719 Ribosomal protein S5, C-terminal domain DY252_09055 PF00333 Ribosomal protein S5, N-terminal domain DY252_09060 PF00327 Ribosomal protein L30p/L7e DY252_09065 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DY252_09070 PF00344 SecY translocase DY252_09075 PF05191 Adenylate kinase, active site lid DY252_09080 PF00416 Ribosomal protein S13/S18 DY252_09085 PF00411 Ribosomal protein S11 DY252_09090 PF01000 RNA polymerase Rpb3/RpoA insert domain DY252_09090 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DY252_09090 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DY252_09095 PF01196 Ribosomal protein L17 DY252_09100 PF17820 PDZ domain DY252_09100 PF13180 PDZ domain DY252_09110 PF12002 MgsA AAA+ ATPase C terminal DY252_09110 PF00004 ATPase family associated with various cellular activities (AAA) DY252_09110 PF16193 AAA C-terminal domain DY252_09115 PF02525 Flavodoxin-like fold DY252_09125 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DY252_09130 PF00849 RNA pseudouridylate synthase DY252_09130 PF01479 S4 domain DY252_09140 PF13419 Haloacid dehalogenase-like hydrolase DY252_09155 PF01738 Dienelactone hydrolase family DY252_09160 PF00528 Binding-protein-dependent transport system inner membrane component DY252_09165 PF00005 ABC transporter DY252_09180 PF00563 EAL domain DY252_09180 PF03707 Bacterial signalling protein N terminal repeat DY252_09180 PF00990 Diguanylate cyclase, GGDEF domain DY252_09190 PF01039 Carboxyl transferase domain DY252_09195 PF00364 Biotin-requiring enzyme DY252_09195 PF00289 Biotin carboxylase, N-terminal domain DY252_09195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DY252_09195 PF02785 Biotin carboxylase C-terminal domain DY252_09215 PF00708 Acylphosphatase DY252_09245 PF01565 FAD binding domain DY252_09245 PF02913 FAD linked oxidases, C-terminal domain DY252_09250 PF01300 Telomere recombination DY252_09250 PF03481 Putative GTP-binding controlling metal-binding DY252_09260 PF00459 Inositol monophosphatase family DY252_09270 PF01875 Memo-like protein DY252_09300 PF00583 Acetyltransferase (GNAT) family DY252_09310 PF13289 SIR2-like domain DY252_09315 PF00883 Cytosol aminopeptidase family, catalytic domain DY252_09315 PF02789 Cytosol aminopeptidase family, N-terminal domain DY252_09320 PF04364 DNA polymerase III chi subunit, HolC DY252_09325 PF09383 NIL domain DY252_09325 PF00005 ABC transporter DY252_09330 PF00528 Binding-protein-dependent transport system inner membrane component DY252_09335 PF03180 NLPA lipoprotein DY252_09350 PF07690 Major Facilitator Superfamily DY252_09365 PF01381 Helix-turn-helix DY252_09370 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB DY252_09390 PF00005 ABC transporter DY252_09390 PF12848 ABC transporter DY252_09395 PF00334 Nucleoside diphosphate kinase DY252_09425 PF00551 Formyl transferase DY252_09430 PF00586 AIR synthase related protein, N-terminal domain DY252_09430 PF02769 AIR synthase related protein, C-terminal domain DY252_09440 PF01594 AI-2E family transporter DY252_09445 PF08299 Bacterial dnaA protein helix-turn-helix DY252_09445 PF00308 Bacterial dnaA protein DY252_09445 PF11638 DnaA N-terminal domain DY252_09450 PF18030 RimK PreATP-grasp domain DY252_09450 PF08443 RimK-like ATP-grasp domain DY252_09455 PF18030 RimK PreATP-grasp domain DY252_09455 PF08443 RimK-like ATP-grasp domain DY252_09465 PF00570 HRDC domain DY252_09465 PF01612 3'-5' exonuclease DY252_09475 PF00440 Bacterial regulatory proteins, tetR family DY252_09495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_09495 PF03466 LysR substrate binding domain DY252_09510 PF02541 Ppx/GppA phosphatase family DY252_09515 PF02503 Polyphosphate kinase middle domain DY252_09515 PF13089 Polyphosphate kinase N-terminal domain DY252_09515 PF17941 Polyphosphate kinase C-terminal domain 1 DY252_09515 PF13090 Polyphosphate kinase C-terminal domain 2 DY252_09525 PF02938 GAD domain DY252_09525 PF00152 tRNA synthetases class II (D, K and N) DY252_09525 PF01336 OB-fold nucleic acid binding domain DY252_09545 PF01022 Bacterial regulatory protein, arsR family DY252_09550 PF00850 Histone deacetylase domain DY252_09555 PF02609 Exonuclease VII small subunit DY252_09560 PF00348 Polyprenyl synthetase DY252_09570 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DY252_09570 PF02779 Transketolase, pyrimidine binding domain DY252_09570 PF02780 Transketolase, C-terminal domain DY252_09585 PF00501 AMP-binding enzyme DY252_09585 PF13193 AMP-binding enzyme C-terminal domain DY252_09595 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_09605 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_09610 PF07729 FCD domain DY252_09610 PF00392 Bacterial regulatory proteins, gntR family DY252_09615 PF01479 S4 domain DY252_09615 PF01728 FtsJ-like methyltransferase DY252_09635 PF00775 Dioxygenase DY252_09635 PF04444 Catechol dioxygenase N terminus DY252_09655 PF03631 Virulence factor BrkB DY252_09670 PF00501 AMP-binding enzyme DY252_09680 PF00924 Mechanosensitive ion channel DY252_09680 PF12794 Mechanosensitive ion channel inner membrane domain 1 DY252_09680 PF12795 Mechanosensitive ion channel porin domain DY252_09685 PF00684 DnaJ central domain DY252_09685 PF01556 DnaJ C terminal domain DY252_09685 PF00226 DnaJ domain DY252_09690 PF16998 17 kDa outer membrane surface antigen DY252_09690 PF05433 Glycine zipper 2TM domain DY252_09695 PF01243 Pyridoxamine 5'-phosphate oxidase DY252_09695 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DY252_09700 PF01022 Bacterial regulatory protein, arsR family DY252_09720 PF02586 SOS response associated peptidase (SRAP) DY252_09730 PF13508 Acetyltransferase (GNAT) domain DY252_09745 PF00155 Aminotransferase class I and II DY252_09760 PF03466 LysR substrate binding domain DY252_09760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_09775 PF00156 Phosphoribosyl transferase domain DY252_09785 PF01740 STAS domain DY252_09785 PF00916 Sulfate permease family DY252_09790 PF00378 Enoyl-CoA hydratase/isomerase DY252_09800 PF07690 Major Facilitator Superfamily DY252_09810 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_09815 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DY252_09820 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_09825 PF00158 Sigma-54 interaction domain DY252_09825 PF02954 Bacterial regulatory protein, Fis family DY252_09825 PF00072 Response regulator receiver domain DY252_09830 PF00512 His Kinase A (phospho-acceptor) domain DY252_09830 PF02743 Cache domain DY252_09830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_09845 PF04055 Radical SAM superfamily DY252_09860 PF02525 Flavodoxin-like fold DY252_09865 PF03466 LysR substrate binding domain DY252_09865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_09870 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_09875 PF01261 Xylose isomerase-like TIM barrel DY252_09880 PF05161 MOFRL family DY252_09880 PF13660 Domain of unknown function (DUF4147) DY252_09885 PF00392 Bacterial regulatory proteins, gntR family DY252_09885 PF07729 FCD domain DY252_09895 PF04107 Glutamate-cysteine ligase family 2(GCS2) DY252_09900 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) DY252_09915 PF00672 HAMP domain DY252_09915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_09915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_09915 PF00672 HAMP domain DY252_09945 PF00753 Metallo-beta-lactamase superfamily DY252_09950 PF00753 Metallo-beta-lactamase superfamily DY252_09950 PF04273 Putative phosphatase (DUF442) DY252_09955 PF01740 STAS domain DY252_09955 PF00916 Sulfate permease family DY252_09960 PF03594 Benzoate membrane transport protein DY252_09965 PF00578 AhpC/TSA family DY252_09965 PF10417 C-terminal domain of 1-Cys peroxiredoxin DY252_09975 PF00691 OmpA family DY252_09975 PF13677 Membrane MotB of proton-channel complex MotA/MotB DY252_09990 PF00459 Inositol monophosphatase family DY252_09995 PF09285 Elongation factor P, C-terminal DY252_09995 PF01132 Elongation factor P (EF-P) OB domain DY252_09995 PF08207 Elongation factor P (EF-P) KOW-like domain DY252_10000 PF02581 Thiamine monophosphate synthase DY252_10015 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DY252_10015 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DY252_10020 PF00456 Transketolase, thiamine diphosphate binding domain DY252_10020 PF02780 Transketolase, C-terminal domain DY252_10020 PF02779 Transketolase, pyrimidine binding domain DY252_10030 PF05164 Cell division protein ZapA DY252_10040 PF13277 YmdB-like protein DY252_10045 PF00672 HAMP domain DY252_10045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_10045 PF17200 Single Cache domain 2 DY252_10050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_10050 PF00672 HAMP domain DY252_10050 PF17200 Single Cache domain 2 DY252_10055 PF01709 Transcriptional regulator DY252_10060 PF02075 Crossover junction endodeoxyribonuclease RuvC DY252_10065 PF07499 RuvA, C-terminal domain DY252_10065 PF01330 RuvA N terminal domain DY252_10070 PF05496 Holliday junction DNA helicase RuvB P-loop domain DY252_10070 PF05491 RuvB C-terminal winged helix domain DY252_10070 PF17864 RuvB AAA lid domain DY252_10075 PF03061 Thioesterase superfamily DY252_10080 PF01618 MotA/TolQ/ExbB proton channel family DY252_10085 PF02472 Biopolymer transport protein ExbD/TolR DY252_10095 PF07676 WD40-like Beta Propeller Repeat DY252_10095 PF04052 TolB amino-terminal domain DY252_10100 PF00691 OmpA family DY252_10110 PF01171 PP-loop family DY252_10115 PF06480 FtsH Extracellular DY252_10115 PF00004 ATPase family associated with various cellular activities (AAA) DY252_10115 PF17862 AAA+ lid domain DY252_10115 PF01434 Peptidase family M41 DY252_10120 PF00809 Pterin binding enzyme DY252_10125 PF00072 Response regulator receiver domain DY252_10125 PF00486 Transcriptional regulatory protein, C terminal DY252_10135 PF13492 GAF domain DY252_10135 PF13493 Domain of unknown function (DUF4118) DY252_10135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_10135 PF00512 His Kinase A (phospho-acceptor) domain DY252_10135 PF02702 Osmosensitive K+ channel His kinase sensor domain DY252_10145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DY252_10145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DY252_10145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DY252_10145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DY252_10150 PF08543 Phosphomethylpyrimidine kinase DY252_10150 PF02581 Thiamine monophosphate synthase DY252_10185 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DY252_10185 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DY252_10190 PF01037 Lrp/AsnC ligand binding domain DY252_10200 PF00528 Binding-protein-dependent transport system inner membrane component DY252_10205 PF00528 Binding-protein-dependent transport system inner membrane component DY252_10210 PF00005 ABC transporter DY252_10210 PF08402 TOBE domain DY252_10215 PF13416 Bacterial extracellular solute-binding protein DY252_10220 PF00120 Glutamine synthetase, catalytic domain DY252_10230 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DY252_10230 PF13378 Enolase C-terminal domain-like DY252_10235 PF02371 Transposase IS116/IS110/IS902 family DY252_10235 PF01548 Transposase DY252_10240 PF00990 Diguanylate cyclase, GGDEF domain DY252_10240 PF17151 Periplasmic sensor domain DY252_10275 PF00005 ABC transporter DY252_10280 PF13533 Biotin-lipoyl like DY252_10285 PF00149 Calcineurin-like phosphoesterase DY252_10285 PF10518 TAT (twin-arginine translocation) pathway signal sequence DY252_10290 PF00202 Aminotransferase class-III DY252_10295 PF03466 LysR substrate binding domain DY252_10295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_10315 PF01850 PIN domain DY252_10320 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DY252_10335 PF02913 FAD linked oxidases, C-terminal domain DY252_10335 PF13183 4Fe-4S dicluster domain DY252_10335 PF01565 FAD binding domain DY252_10345 PF08479 POTRA domain, ShlB-type DY252_10345 PF17287 POTRA domain DY252_10345 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DY252_10350 PF13018 Extended Signal Peptide of Type V secretion system DY252_10350 PF13332 Hemagglutinin repeat DY252_10350 PF05594 Haemagluttinin repeat DY252_10350 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain DY252_10350 PF05860 haemagglutination activity domain DY252_10360 PF00005 ABC transporter DY252_10365 PF00528 Binding-protein-dependent transport system inner membrane component DY252_10370 PF09084 NMT1/THI5 like DY252_10375 PF00491 Arginase family DY252_10380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_10380 PF03466 LysR substrate binding domain DY252_10385 PF05016 ParE toxin of type II toxin-antitoxin system, parDE DY252_10390 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DY252_10390 PF00171 Aldehyde dehydrogenase family DY252_10390 PF01619 Proline dehydrogenase DY252_10390 PF14850 DNA-binding domain of Proline dehydrogenase DY252_10395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_10395 PF03466 LysR substrate binding domain DY252_10410 PF12464 Maltose acetyltransferase DY252_10410 PF14602 Hexapeptide repeat of succinyl-transferase DY252_10425 PF00486 Transcriptional regulatory protein, C terminal DY252_10425 PF00072 Response regulator receiver domain DY252_10430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_10430 PF00512 His Kinase A (phospho-acceptor) domain DY252_10435 PF00356 Bacterial regulatory proteins, lacI family DY252_10440 PF01547 Bacterial extracellular solute-binding protein DY252_10445 PF00528 Binding-protein-dependent transport system inner membrane component DY252_10455 PF08402 TOBE domain DY252_10455 PF00005 ABC transporter DY252_10460 PF00149 Calcineurin-like phosphoesterase DY252_10465 PF01494 FAD binding domain DY252_10475 PF00893 Small Multidrug Resistance protein DY252_10480 PF01370 NAD dependent epimerase/dehydratase family DY252_10480 PF08338 Domain of unknown function (DUF1731) DY252_10490 PF03466 LysR substrate binding domain DY252_10490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_10505 PF08019 Phosphoethanolamine transferase EptA/EptB DY252_10505 PF00884 Sulfatase DY252_10515 PF01894 Uncharacterised protein family UPF0047 DY252_10540 PF00857 Isochorismatase family DY252_10545 PF08471 Class II vitamin B12-dependent ribonucleotide reductase DY252_10545 PF02867 Ribonucleotide reductase, barrel domain DY252_10570 PF09923 Uncharacterized protein conserved in bacteria (DUF2155) DY252_10580 PF04264 YceI-like domain DY252_10585 PF01292 Prokaryotic cytochrome b561 DY252_10595 PF00672 HAMP domain DY252_10595 PF17200 Single Cache domain 2 DY252_10595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_10600 PF00672 HAMP domain DY252_10600 PF00672 HAMP domain DY252_10600 PF17200 Single Cache domain 2 DY252_10600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_10600 PF17200 Single Cache domain 2 DY252_10600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_10605 PF02230 Phospholipase/Carboxylesterase DY252_10610 PF01554 MatE DY252_10615 PF01037 Lrp/AsnC ligand binding domain DY252_10625 PF02082 Transcriptional regulator DY252_10630 PF00271 Helicase conserved C-terminal domain DY252_10630 PF00270 DEAD/DEAH box helicase DY252_10650 PF01751 Toprim domain DY252_10650 PF00986 DNA gyrase B subunit, carboxyl terminus DY252_10650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_10650 PF00204 DNA gyrase B DY252_10655 PF03061 Thioesterase superfamily DY252_10665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_10665 PF00005 ABC transporter DY252_10670 PF00005 ABC transporter DY252_10670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_10680 PF00528 Binding-protein-dependent transport system inner membrane component DY252_10685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DY252_10710 PF00158 Sigma-54 interaction domain DY252_10710 PF00072 Response regulator receiver domain DY252_10710 PF02954 Bacterial regulatory protein, Fis family DY252_10715 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DY252_10720 PF02887 Pyruvate kinase, alpha/beta domain DY252_10720 PF00224 Pyruvate kinase, barrel domain DY252_10740 PF01965 DJ-1/PfpI family DY252_10745 PF00924 Mechanosensitive ion channel DY252_10745 PF05552 Conserved TM helix DY252_10750 PF00691 OmpA family DY252_10760 PF13380 CoA binding domain DY252_10765 PF01794 Ferric reductase like transmembrane component DY252_10775 PF01810 LysE type translocator DY252_10800 PF00572 Ribosomal protein L13 DY252_10805 PF00380 Ribosomal protein S9/S16 DY252_10810 PF01070 FMN-dependent dehydrogenase DY252_10825 PF00483 Nucleotidyl transferase DY252_10830 PF16363 GDP-mannose 4,6 dehydratase DY252_10835 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DY252_10840 PF08421 Putative zinc binding domain DY252_10840 PF08484 C-methyltransferase C-terminal domain DY252_10845 PF16363 GDP-mannose 4,6 dehydratase DY252_10855 PF04989 Cephalosporin hydroxylase DY252_10870 PF01118 Semialdehyde dehydrogenase, NAD binding domain DY252_10870 PF02774 Semialdehyde dehydrogenase, dimerisation domain DY252_10875 PF00132 Bacterial transferase hexapeptide (six repeats) DY252_10880 PF03150 Di-haem cytochrome c peroxidase DY252_10885 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DY252_10885 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DY252_10890 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DY252_10900 PF00155 Aminotransferase class I and II DY252_10905 PF03447 Homoserine dehydrogenase, NAD binding domain DY252_10905 PF00742 Homoserine dehydrogenase DY252_10905 PF01842 ACT domain DY252_10910 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DY252_10915 PF00012 Hsp70 protein DY252_10935 PF17768 RecJ OB domain DY252_10935 PF01368 DHH family DY252_10935 PF02272 DHHA1 domain DY252_10935 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DY252_10940 PF07690 Major Facilitator Superfamily DY252_10960 PF00817 impB/mucB/samB family DY252_10960 PF11799 impB/mucB/samB family C-terminal domain DY252_10980 PF12706 Beta-lactamase superfamily domain DY252_10980 PF00753 Metallo-beta-lactamase superfamily DY252_10985 PF00691 OmpA family DY252_10985 PF13677 Membrane MotB of proton-channel complex MotA/MotB DY252_10990 PF01618 MotA/TolQ/ExbB proton channel family DY252_10995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_10995 PF00672 HAMP domain DY252_11015 PF00156 Phosphoribosyl transferase domain DY252_11035 PF01053 Cys/Met metabolism PLP-dependent enzyme DY252_11040 PF01266 FAD dependent oxidoreductase DY252_11055 PF09084 NMT1/THI5 like DY252_11060 PF00528 Binding-protein-dependent transport system inner membrane component DY252_11065 PF00005 ABC transporter DY252_11085 PF00850 Histone deacetylase domain DY252_11125 PF00248 Aldo/keto reductase family DY252_11130 PF02492 CobW/HypB/UreG, nucleotide-binding domain DY252_11130 PF07683 Cobalamin synthesis protein cobW C-terminal domain DY252_11135 PF01502 Phosphoribosyl-AMP cyclohydrolase DY252_11145 PF00005 ABC transporter DY252_11150 PF00950 ABC 3 transport family DY252_11155 PF01053 Cys/Met metabolism PLP-dependent enzyme DY252_11160 PF00291 Pyridoxal-phosphate dependent enzyme DY252_11160 PF13291 ACT domain DY252_11165 PF01783 Ribosomal L32p protein family DY252_11180 PF00581 Rhodanese-like domain DY252_11185 PF02272 DHHA1 domain DY252_11185 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DY252_11185 PF01411 tRNA synthetases class II (A) DY252_11210 PF01810 LysE type translocator DY252_11215 PF02652 L-lactate permease DY252_11220 PF00296 Luciferase-like monooxygenase DY252_11230 PF03466 LysR substrate binding domain DY252_11230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_11235 PF07690 Major Facilitator Superfamily DY252_11240 PF00291 Pyridoxal-phosphate dependent enzyme DY252_11245 PF00293 NUDIX domain DY252_11250 PF07694 5TMR of 5TMR-LYT DY252_11250 PF00990 Diguanylate cyclase, GGDEF domain DY252_11260 PF01546 Peptidase family M20/M25/M40 DY252_11260 PF07687 Peptidase dimerisation domain DY252_11265 PF00684 DnaJ central domain DY252_11265 PF01556 DnaJ C terminal domain DY252_11265 PF00226 DnaJ domain DY252_11275 PF00444 Ribosomal protein L36 DY252_11290 PF03435 Saccharopine dehydrogenase NADP binding domain DY252_11290 PF16653 Saccharopine dehydrogenase C-terminal domain DY252_11310 PF01925 Sulfite exporter TauE/SafE DY252_11315 PF01206 Sulfurtransferase TusA DY252_11320 PF13673 Acetyltransferase (GNAT) domain DY252_11330 PF00563 EAL domain DY252_11330 PF03707 Bacterial signalling protein N terminal repeat DY252_11330 PF00990 Diguanylate cyclase, GGDEF domain DY252_11335 PF00990 Diguanylate cyclase, GGDEF domain DY252_11335 PF08448 PAS fold DY252_11335 PF00563 EAL domain DY252_11340 PF00990 Diguanylate cyclase, GGDEF domain DY252_11355 PF13654 AAA domain DY252_11355 PF05362 Lon protease (S16) C-terminal proteolytic domain DY252_11360 PF00392 Bacterial regulatory proteins, gntR family DY252_11360 PF00155 Aminotransferase class I and II DY252_11370 PF00291 Pyridoxal-phosphate dependent enzyme DY252_11370 PF13291 ACT domain DY252_11380 PF02567 Phenazine biosynthesis-like protein DY252_11385 PF03600 Citrate transporter DY252_11385 PF02080 TrkA-C domain DY252_11395 PF13393 Histidyl-tRNA synthetase DY252_11400 PF00709 Adenylosuccinate synthetase DY252_11415 PF00140 Sigma-70 factor, region 1.2 DY252_11415 PF04542 Sigma-70 region 2 DY252_11415 PF04545 Sigma-70, region 4 DY252_11420 PF00849 RNA pseudouridylate synthase DY252_11440 PF00571 CBS domain DY252_11440 PF00005 ABC transporter DY252_11445 PF00528 Binding-protein-dependent transport system inner membrane component DY252_11465 PF13416 Bacterial extracellular solute-binding protein DY252_11470 PF13416 Bacterial extracellular solute-binding protein DY252_11485 PF10996 Beta-Casp domain DY252_11485 PF00753 Metallo-beta-lactamase superfamily DY252_11485 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DY252_11495 PF00534 Glycosyl transferases group 1 DY252_11495 PF13439 Glycosyltransferase Family 4 DY252_11500 PF00534 Glycosyl transferases group 1 DY252_11500 PF13439 Glycosyltransferase Family 4 DY252_11525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_11525 PF00005 ABC transporter DY252_11530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DY252_11535 PF00528 Binding-protein-dependent transport system inner membrane component DY252_11540 PF12911 N-terminal TM domain of oligopeptide transport permease C DY252_11540 PF00528 Binding-protein-dependent transport system inner membrane component DY252_11555 PF12832 MFS_1 like family DY252_11560 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DY252_11560 PF01266 FAD dependent oxidoreductase DY252_11565 PF01207 Dihydrouridine synthase (Dus) DY252_11570 PF03960 ArsC family DY252_11575 PF13419 Haloacid dehalogenase-like hydrolase DY252_11600 PF00471 Ribosomal protein L33 DY252_11605 PF13180 PDZ domain DY252_11605 PF03572 Peptidase family S41 DY252_11620 PF17876 Cold shock domain DY252_11620 PF08461 Ribonuclease R winged-helix domain DY252_11620 PF08206 Ribonuclease B OB domain DY252_11620 PF00773 RNB domain DY252_11620 PF00575 S1 RNA binding domain DY252_11625 PF01396 Topoisomerase DNA binding C4 zinc finger DY252_11625 PF01131 DNA topoisomerase DY252_11625 PF13368 Topoisomerase C-terminal repeat DY252_11625 PF01751 Toprim domain DY252_11630 PF02481 DNA recombination-mediator protein A DY252_11630 PF17782 DprA winged helix domain DY252_11635 PF02660 Glycerol-3-phosphate acyltransferase DY252_11640 PF01979 Amidohydrolase family DY252_11645 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DY252_11645 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DY252_11660 PF03652 Holliday junction resolvase DY252_11665 PF08402 TOBE domain DY252_11665 PF00005 ABC transporter DY252_11675 PF00528 Binding-protein-dependent transport system inner membrane component DY252_11680 PF00528 Binding-protein-dependent transport system inner membrane component DY252_11685 PF02686 Glu-tRNAGln amidotransferase C subunit DY252_11690 PF01425 Amidase DY252_11695 PF02637 GatB domain DY252_11695 PF02934 GatB/GatE catalytic domain DY252_11700 PF03358 NADPH-dependent FMN reductase DY252_11705 PF00403 Heavy-metal-associated domain DY252_11710 PF01965 DJ-1/PfpI family DY252_11715 PF03466 LysR substrate binding domain DY252_11715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_11720 PF00265 Thymidine kinase DY252_11725 PF01810 LysE type translocator DY252_11730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_11730 PF03466 LysR substrate binding domain DY252_11735 PF04403 Paraquat-inducible protein A DY252_11740 PF02470 MlaD protein DY252_11755 PF01965 DJ-1/PfpI family DY252_11755 PF12833 Helix-turn-helix domain DY252_11800 PF00294 pfkB family carbohydrate kinase DY252_11805 PF02872 5'-nucleotidase, C-terminal domain DY252_11805 PF00149 Calcineurin-like phosphoesterase DY252_11830 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DY252_11835 PF01048 Phosphorylase superfamily DY252_11840 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DY252_11840 PF00591 Glycosyl transferase family, a/b domain DY252_11840 PF02885 Glycosyl transferase family, helical bundle domain DY252_11845 PF08220 DeoR-like helix-turn-helix domain DY252_11845 PF00455 DeoR C terminal sensor domain DY252_11850 PF00005 ABC transporter DY252_11855 PF00005 ABC transporter DY252_11860 PF00528 Binding-protein-dependent transport system inner membrane component DY252_11865 PF00528 Binding-protein-dependent transport system inner membrane component DY252_11870 PF00497 Bacterial extracellular solute-binding proteins, family 3 DY252_11875 PF00501 AMP-binding enzyme DY252_11875 PF13193 AMP-binding enzyme C-terminal domain DY252_11880 PF00994 Probable molybdopterin binding domain DY252_11890 PF12729 Four helix bundle sensory module for signal transduction DY252_11890 PF00672 HAMP domain DY252_11890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_11900 PF01614 Bacterial transcriptional regulator DY252_11900 PF09339 IclR helix-turn-helix domain DY252_11905 PF01625 Peptide methionine sulfoxide reductase DY252_11940 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DY252_11940 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DY252_11940 PF03129 Anticodon binding domain DY252_11940 PF02824 TGS domain DY252_11945 PF07690 Major Facilitator Superfamily DY252_11970 PF05698 Bacterial trigger factor protein (TF) C-terminus DY252_11975 PF03883 Peroxide stress protein YaaA DY252_11980 PF02885 Glycosyl transferase family, helical bundle domain DY252_11980 PF00591 Glycosyl transferase family, a/b domain DY252_11995 PF01891 Cobalt uptake substrate-specific transmembrane region DY252_12010 PF00005 ABC transporter DY252_12030 PF00583 Acetyltransferase (GNAT) family DY252_12030 PF13380 CoA binding domain DY252_12030 PF13607 Succinyl-CoA ligase like flavodoxin domain DY252_12055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_12055 PF08447 PAS fold DY252_12070 PF02321 Outer membrane efflux protein DY252_12080 PF00133 tRNA synthetases class I (I, L, M and V) DY252_12080 PF08264 Anticodon-binding domain of tRNA DY252_12080 PF10458 Valyl tRNA synthetase tRNA binding arm DY252_12085 PF04715 Anthranilate synthase component I, N terminal region DY252_12085 PF00425 chorismate binding enzyme DY252_12090 PF00117 Glutamine amidotransferase class-I DY252_12095 PF01063 Amino-transferase class IV DY252_12105 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DY252_12115 PF01521 Iron-sulphur cluster biosynthesis DY252_12120 PF03485 Arginyl tRNA synthetase N terminal domain DY252_12120 PF00750 tRNA synthetases class I (R) DY252_12120 PF05746 DALR anticodon binding domain DY252_12130 PF00933 Glycosyl hydrolase family 3 N terminal domain DY252_12135 PF02163 Peptidase family M50 DY252_12140 PF02616 Segregation and condensation protein ScpA DY252_12145 PF04079 Segregation and condensation complex subunit ScpB DY252_12150 PF08402 TOBE domain DY252_12150 PF00005 ABC transporter DY252_12155 PF02416 mttA/Hcf106 family DY252_12160 PF02416 mttA/Hcf106 family DY252_12165 PF00902 Sec-independent protein translocase protein (TatC) DY252_12170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DY252_12170 PF02403 Seryl-tRNA synthetase N-terminal domain DY252_12175 PF01975 Survival protein SurE DY252_12185 PF01551 Peptidase family M23 DY252_12185 PF01476 LysM domain DY252_12195 PF02699 Preprotein translocase subunit DY252_12210 PF04430 Protein of unknown function (DUF498/DUF598) DY252_12215 PF01593 Flavin containing amine oxidoreductase DY252_12220 PF00924 Mechanosensitive ion channel DY252_12235 PF01134 Glucose inhibited division protein A DY252_12245 PF17760 UvrA interaction domain DY252_12245 PF17755 UvrA DNA-binding domain DY252_12250 PF01116 Fructose-bisphosphate aldolase class-II DY252_12255 PF01979 Amidohydrolase family DY252_12265 PF13416 Bacterial extracellular solute-binding protein DY252_12270 PF00528 Binding-protein-dependent transport system inner membrane component DY252_12275 PF00528 Binding-protein-dependent transport system inner membrane component DY252_12280 PF00005 ABC transporter DY252_12280 PF17912 MalK OB fold domain DY252_12285 PF13185 GAF domain DY252_12290 PF00436 Single-strand binding protein family DY252_12300 PF02810 SEC-C motif DY252_12305 PF04545 Sigma-70, region 4 DY252_12305 PF04542 Sigma-70 region 2 DY252_12305 PF00140 Sigma-70 factor, region 1.2 DY252_12310 PF13344 Haloacid dehalogenase-like hydrolase DY252_12310 PF00293 NUDIX domain DY252_12325 PF17191 RecG wedge domain DY252_12325 PF00270 DEAD/DEAH box helicase DY252_12325 PF00271 Helicase conserved C-terminal domain DY252_12335 PF02559 CarD-like/TRCF domain DY252_12335 PF00271 Helicase conserved C-terminal domain DY252_12335 PF00270 DEAD/DEAH box helicase DY252_12335 PF03461 TRCF domain DY252_12335 PF17757 UvrB interaction domain DY252_12345 PF01676 Metalloenzyme superfamily DY252_12350 PF01791 DeoC/LacD family aldolase DY252_12360 PF00528 Binding-protein-dependent transport system inner membrane component DY252_12365 PF00528 Binding-protein-dependent transport system inner membrane component DY252_12370 PF00497 Bacterial extracellular solute-binding proteins, family 3 DY252_12375 PF00005 ABC transporter DY252_12380 PF02743 Cache domain DY252_12380 PF00672 HAMP domain DY252_12380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_12395 PF08274 PhnA Zinc-Ribbon DY252_12395 PF03831 PhnA domain DY252_12405 PF02698 DUF218 domain DY252_12410 PF13406 Transglycosylase SLT domain DY252_12415 PF03330 Lytic transglycolase DY252_12415 PF05036 Sporulation related domain DY252_12420 PF00768 D-alanyl-D-alanine carboxypeptidase DY252_12420 PF07943 Penicillin-binding protein 5, C-terminal domain DY252_12425 PF02223 Thymidylate kinase DY252_12430 PF09115 DNA polymerase III, delta subunit, C terminal DY252_12435 PF08264 Anticodon-binding domain of tRNA DY252_12435 PF09334 tRNA synthetases class I (M) DY252_12440 PF01026 TatD related DNase DY252_12445 PF03099 Biotin/lipoate A/B protein ligase family DY252_12445 PF12706 Beta-lactamase superfamily domain DY252_12470 PF00550 Phosphopantetheine attachment site DY252_12475 PF00550 Phosphopantetheine attachment site DY252_12485 PF13193 AMP-binding enzyme C-terminal domain DY252_12485 PF00501 AMP-binding enzyme DY252_12510 PF04820 Tryptophan halogenase DY252_12520 PF02801 Beta-ketoacyl synthase, C-terminal domain DY252_12520 PF00109 Beta-ketoacyl synthase, N-terminal domain DY252_12535 PF02801 Beta-ketoacyl synthase, C-terminal domain DY252_12535 PF00109 Beta-ketoacyl synthase, N-terminal domain DY252_12545 PF02653 Branched-chain amino acid transport system / permease component DY252_12550 PF02653 Branched-chain amino acid transport system / permease component DY252_12555 PF00005 ABC transporter DY252_12565 PF05384 Sensor protein DegS DY252_12565 PF07730 Histidine kinase DY252_12565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_12575 PF00512 His Kinase A (phospho-acceptor) domain DY252_12575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_12575 PF08521 Two-component sensor kinase N-terminal DY252_12580 PF00072 Response regulator receiver domain DY252_12580 PF00486 Transcriptional regulatory protein, C terminal DY252_12595 PF02515 CoA-transferase family III DY252_12615 PF01970 Tripartite tricarboxylate transporter TctA family DY252_12620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_12625 PF05145 Transition state regulatory protein AbrB DY252_12630 PF10518 TAT (twin-arginine translocation) pathway signal sequence DY252_12630 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_12630 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding DY252_12640 PF00034 Cytochrome c DY252_12645 PF00174 Oxidoreductase molybdopterin binding domain DY252_12680 PF02683 Cytochrome C biogenesis protein transmembrane region DY252_12690 PF01022 Bacterial regulatory protein, arsR family DY252_12695 PF04143 Sulphur transport DY252_12710 PF00583 Acetyltransferase (GNAT) family DY252_12715 PF00202 Aminotransferase class-III DY252_12720 PF06339 Ectoine synthase DY252_12725 PF00696 Amino acid kinase family DY252_12725 PF13840 ACT domain DY252_12730 PF03819 MazG nucleotide pyrophosphohydrolase domain DY252_12735 PF00459 Inositol monophosphatase family DY252_12740 PF01926 50S ribosome-binding GTPase DY252_12740 PF13167 GTP-binding GTPase N-terminal DY252_12740 PF16360 GTP-binding GTPase Middle Region DY252_12745 PF17209 Hfq protein DY252_12755 PF02080 TrkA-C domain DY252_12755 PF02254 TrkA-N domain DY252_12760 PF00072 Response regulator receiver domain DY252_12760 PF02954 Bacterial regulatory protein, Fis family DY252_12760 PF00158 Sigma-54 interaction domain DY252_12765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_12765 PF00672 HAMP domain DY252_12770 PF00072 Response regulator receiver domain DY252_12770 PF02954 Bacterial regulatory protein, Fis family DY252_12770 PF00158 Sigma-54 interaction domain DY252_12775 PF00989 PAS fold DY252_12775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_12775 PF00512 His Kinase A (phospho-acceptor) domain DY252_12780 PF01207 Dihydrouridine synthase (Dus) DY252_12785 PF01578 Cytochrome C assembly protein DY252_12790 PF02542 YgbB family DY252_12790 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DY252_12795 PF04279 Intracellular septation protein A DY252_12800 PF03091 CutA1 divalent ion tolerance protein DY252_12820 PF13411 MerR HTH family regulatory protein DY252_12825 PF00216 Bacterial DNA-binding protein DY252_12830 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DY252_12830 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DY252_12835 PF02504 Fatty acid synthesis protein DY252_12855 PF00586 AIR synthase related protein, N-terminal domain DY252_12855 PF02769 AIR synthase related protein, C-terminal domain DY252_12860 PF01029 NusB family DY252_12865 PF00885 6,7-dimethyl-8-ribityllumazine synthase DY252_12870 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DY252_12870 PF00925 GTP cyclohydrolase II DY252_12875 PF00677 Lumazine binding domain DY252_12880 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DY252_12880 PF01872 RibD C-terminal domain DY252_12885 PF03477 ATP cone domain DY252_12890 PF00464 Serine hydroxymethyltransferase DY252_12895 PF02502 Ribose/Galactose Isomerase DY252_12900 PF05443 ROS/MUCR transcriptional regulator protein DY252_12905 PF13458 Periplasmic binding protein DY252_12915 PF00005 ABC transporter DY252_12920 PF00005 ABC transporter DY252_12920 PF12399 Branched-chain amino acid ATP-binding cassette transporter DY252_12925 PF02653 Branched-chain amino acid transport system / permease component DY252_12925 PF11862 Domain of unknown function (DUF3382) DY252_12930 PF02653 Branched-chain amino acid transport system / permease component DY252_12940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DY252_12940 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DY252_12945 PF00378 Enoyl-CoA hydratase/isomerase DY252_12950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DY252_12950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DY252_12950 PF02770 Acyl-CoA dehydrogenase, middle domain DY252_12955 PF01053 Cys/Met metabolism PLP-dependent enzyme DY252_12960 PF08220 DeoR-like helix-turn-helix domain DY252_12960 PF00455 DeoR C terminal sensor domain DY252_12970 PF00490 Delta-aminolevulinic acid dehydratase DY252_12975 PF13419 Haloacid dehalogenase-like hydrolase DY252_12985 PF00501 AMP-binding enzyme DY252_12985 PF13193 AMP-binding enzyme C-terminal domain DY252_12995 PF00171 Aldehyde dehydrogenase family DY252_13005 PF00291 Pyridoxal-phosphate dependent enzyme DY252_13005 PF13291 ACT domain DY252_13010 PF01613 Flavin reductase like domain DY252_13015 PF01618 MotA/TolQ/ExbB proton channel family DY252_13020 PF00691 OmpA family DY252_13020 PF13677 Membrane MotB of proton-channel complex MotA/MotB DY252_13025 PF04376 Arginine-tRNA-protein transferase, N terminus DY252_13025 PF04377 Arginine-tRNA-protein transferase, C terminus DY252_13030 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_13035 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_13045 PF03989 DNA gyrase C-terminal domain, beta-propeller DY252_13045 PF00521 DNA gyrase/topoisomerase IV, subunit A DY252_13050 PF02565 Recombination protein O C terminal DY252_13050 PF11967 Recombination protein O N terminal DY252_13060 PF01926 50S ribosome-binding GTPase DY252_13060 PF07650 KH domain DY252_13065 PF14622 Ribonuclease-III-like DY252_13065 PF00035 Double-stranded RNA binding motif DY252_13070 PF10502 Signal peptidase, peptidase S26 DY252_13075 PF01648 4'-phosphopantetheinyl transferase superfamily DY252_13080 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DY252_13090 PF04607 Region found in RelA / SpoT proteins DY252_13090 PF02824 TGS domain DY252_13090 PF13291 ACT domain DY252_13095 PF01192 RNA polymerase Rpb6 DY252_13110 PF03167 Uracil DNA glycosylase superfamily DY252_13115 PF16124 RecQ zinc-binding DY252_13115 PF00271 Helicase conserved C-terminal domain DY252_13115 PF09382 RQC domain DY252_13115 PF00570 HRDC domain DY252_13115 PF00270 DEAD/DEAH box helicase DY252_13120 PF00255 Glutathione peroxidase DY252_13125 PF00174 Oxidoreductase molybdopterin binding domain DY252_13130 PF01668 SmpB protein DY252_13135 PF00701 Dihydrodipicolinate synthetase family DY252_13140 PF10145 Phage-related minor tail protein DY252_13140 PF01464 Transglycosylase SLT domain DY252_13140 PF01551 Peptidase family M23 DY252_13155 PF01551 Peptidase family M23 DY252_13160 PF04608 Phosphatidylglycerophosphatase A DY252_13165 PF00994 Probable molybdopterin binding domain DY252_13165 PF02464 Competence-damaged protein DY252_13170 PF03364 Polyketide cyclase / dehydrase and lipid transport DY252_13175 PF04055 Radical SAM superfamily DY252_13180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DY252_13180 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_13185 PF02817 e3 binding domain DY252_13185 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DY252_13185 PF00364 Biotin-requiring enzyme DY252_13190 PF02780 Transketolase, C-terminal domain DY252_13190 PF00364 Biotin-requiring enzyme DY252_13190 PF02779 Transketolase, pyrimidine binding domain DY252_13195 PF00676 Dehydrogenase E1 component DY252_13205 PF00113 Enolase, C-terminal TIM barrel domain DY252_13205 PF03952 Enolase, N-terminal domain DY252_13210 PF00793 DAHP synthetase I family DY252_13215 PF00117 Glutamine amidotransferase class-I DY252_13215 PF06418 CTP synthase N-terminus DY252_13225 PF00121 Triosephosphate isomerase DY252_13230 PF00639 PPIC-type PPIASE domain DY252_13235 PF04715 Anthranilate synthase component I, N terminal region DY252_13235 PF00425 chorismate binding enzyme DY252_13240 PF04748 Divergent polysaccharide deacetylase DY252_13245 PF00117 Glutamine amidotransferase class-I DY252_13250 PF02885 Glycosyl transferase family, helical bundle domain DY252_13250 PF00591 Glycosyl transferase family, a/b domain DY252_13255 PF00218 Indole-3-glycerol phosphate synthase DY252_13260 PF01967 MoaC family DY252_13265 PF01726 LexA DNA binding domain DY252_13265 PF00717 Peptidase S24-like DY252_13270 PF13567 Domain of unknown function (DUF4131) DY252_13270 PF00753 Metallo-beta-lactamase superfamily DY252_13270 PF03772 Competence protein DY252_13275 PF00749 tRNA synthetases class I (E and Q), catalytic domain DY252_13280 PF00285 Citrate synthase, C-terminal domain DY252_13290 PF01810 LysE type translocator DY252_13295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_13295 PF03466 LysR substrate binding domain DY252_13300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DY252_13305 PF02684 Lipid-A-disaccharide synthetase DY252_13310 PF06230 LpxI C-terminal domain DY252_13310 PF17930 LpxI N-terminal domain DY252_13315 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DY252_13315 PF00132 Bacterial transferase hexapeptide (six repeats) DY252_13320 PF07977 FabA-like domain DY252_13325 PF00132 Bacterial transferase hexapeptide (six repeats) DY252_13325 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DY252_13335 PF01103 Surface antigen DY252_13335 PF07244 Surface antigen variable number repeat DY252_13340 PF17820 PDZ domain DY252_13340 PF02163 Peptidase family M50 DY252_13345 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DY252_13345 PF13288 DXP reductoisomerase C-terminal domain DY252_13345 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DY252_13355 PF01255 Putative undecaprenyl diphosphate synthase DY252_13360 PF01765 Ribosome recycling factor DY252_13365 PF00696 Amino acid kinase family DY252_13370 PF00889 Elongation factor TS DY252_13375 PF00318 Ribosomal protein S2 DY252_13380 PF02811 PHP domain DY252_13380 PF14579 Helix-hairpin-helix motif DY252_13380 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DY252_13380 PF07733 Bacterial DNA polymerase III alpha NTPase domain DY252_13385 PF00005 ABC transporter DY252_13390 PF12704 MacB-like periplasmic core domain DY252_13390 PF02687 FtsX-like permease family DY252_13395 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DY252_13395 PF03129 Anticodon binding domain DY252_13415 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DY252_13415 PF12706 Beta-lactamase superfamily domain DY252_13415 PF17770 Ribonuclease J C-terminal domain DY252_13420 PF03309 Type III pantothenate kinase DY252_13425 PF02237 Biotin protein ligase C terminal domain DY252_13425 PF03099 Biotin/lipoate A/B protein ligase family DY252_13430 PF00361 Proton-conducting membrane transporter DY252_13435 PF00361 Proton-conducting membrane transporter DY252_13435 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DY252_13440 PF00361 Proton-conducting membrane transporter DY252_13440 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DY252_13445 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DY252_13450 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DY252_13455 PF12838 4Fe-4S dicluster domain DY252_13460 PF00146 NADH dehydrogenase DY252_13465 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DY252_13465 PF00384 Molybdopterin oxidoreductase DY252_13465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DY252_13470 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DY252_13470 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DY252_13470 PF10531 SLBB domain DY252_13480 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DY252_13485 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DY252_13490 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DY252_13495 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DY252_13505 PF01706 FliG C-terminal domain DY252_13505 PF14842 FliG N-terminal domain DY252_13505 PF14841 FliG middle domain DY252_13525 PF00216 Bacterial DNA-binding protein DY252_13530 PF02190 ATP-dependent protease La (LON) substrate-binding domain DY252_13530 PF05362 Lon protease (S16) C-terminal proteolytic domain DY252_13530 PF00004 ATPase family associated with various cellular activities (AAA) DY252_13535 PF06689 ClpX C4-type zinc finger DY252_13535 PF10431 C-terminal, D2-small domain, of ClpB protein DY252_13535 PF07724 AAA domain (Cdc48 subfamily) DY252_13540 PF00574 Clp protease DY252_13545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DY252_13545 PF05698 Bacterial trigger factor protein (TF) C-terminus DY252_13545 PF05697 Bacterial trigger factor protein (TF) DY252_13560 PF01256 Carbohydrate kinase DY252_13560 PF03853 YjeF-related protein N-terminus DY252_13565 PF01266 FAD dependent oxidoreductase DY252_13570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_13570 PF00512 His Kinase A (phospho-acceptor) domain DY252_13570 PF00989 PAS fold DY252_13575 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DY252_13580 PF00376 MerR family regulatory protein DY252_13580 PF09278 MerR, DNA binding DY252_13585 PF00403 Heavy-metal-associated domain DY252_13590 PF00210 Ferritin-like domain DY252_13595 PF00210 Ferritin-like domain DY252_13600 PF04244 Deoxyribodipyrimidine photo-lyase-related protein DY252_13605 PF03441 FAD binding domain of DNA photolyase DY252_13605 PF00875 DNA photolyase DY252_13625 PF01547 Bacterial extracellular solute-binding protein DY252_13635 PF00528 Binding-protein-dependent transport system inner membrane component DY252_13640 PF00005 ABC transporter DY252_13640 PF17912 MalK OB fold domain DY252_13645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_13645 PF00672 HAMP domain DY252_13645 PF00512 His Kinase A (phospho-acceptor) domain DY252_13650 PF00486 Transcriptional regulatory protein, C terminal DY252_13650 PF00072 Response regulator receiver domain DY252_13660 PF01593 Flavin containing amine oxidoreductase DY252_13675 PF00342 Phosphoglucose isomerase DY252_13680 PF00294 pfkB family carbohydrate kinase DY252_13695 PF00491 Arginase family DY252_13700 PF00171 Aldehyde dehydrogenase family DY252_13705 PF07883 Cupin domain DY252_13705 PF01381 Helix-turn-helix DY252_13710 PF00120 Glutamine synthetase, catalytic domain DY252_13715 PF00202 Aminotransferase class-III DY252_13735 PF01266 FAD dependent oxidoreductase DY252_13740 PF03313 Serine dehydratase alpha chain DY252_13745 PF05199 GMC oxidoreductase DY252_13745 PF00732 GMC oxidoreductase DY252_13750 PF00171 Aldehyde dehydrogenase family DY252_13755 PF00440 Bacterial regulatory proteins, tetR family DY252_13755 PF13977 BetI-type transcriptional repressor, C-terminal DY252_13760 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DY252_13765 PF00528 Binding-protein-dependent transport system inner membrane component DY252_13770 PF00571 CBS domain DY252_13770 PF00005 ABC transporter DY252_13780 PF03466 LysR substrate binding domain DY252_13780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_13790 PF00528 Binding-protein-dependent transport system inner membrane component DY252_13800 PF00005 ABC transporter DY252_13800 PF08402 TOBE domain DY252_13805 PF00202 Aminotransferase class-III DY252_13810 PF05853 beta-keto acid cleavage enzyme DY252_13815 PF00850 Histone deacetylase domain DY252_13820 PF01266 FAD dependent oxidoreductase DY252_13825 PF01546 Peptidase family M20/M25/M40 DY252_13825 PF07687 Peptidase dimerisation domain DY252_13830 PF01042 Endoribonuclease L-PSP DY252_13850 PF02423 Ornithine cyclodeaminase/mu-crystallin family DY252_13860 PF07364 Metallopeptidase family M81 DY252_13860 PF07171 MlrC C-terminus DY252_13865 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_13870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_13880 PF01380 SIS domain DY252_13880 PF01418 Helix-turn-helix domain, rpiR family DY252_13890 PF01103 Surface antigen DY252_13890 PF17243 POTRA domain TamA domain 1 DY252_13910 PF02371 Transposase IS116/IS110/IS902 family DY252_13910 PF01548 Transposase DY252_13930 PF10397 Adenylosuccinate lyase C-terminus DY252_13930 PF00206 Lyase DY252_13935 PF00108 Thiolase, N-terminal domain DY252_13935 PF02803 Thiolase, C-terminal domain DY252_13940 PF01144 Coenzyme A transferase DY252_13945 PF01144 Coenzyme A transferase DY252_13955 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DY252_13955 PF00775 Dioxygenase DY252_13965 PF12146 Serine aminopeptidase, S33 DY252_13970 PF03466 LysR substrate binding domain DY252_13970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_13975 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_13985 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_13995 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DY252_13995 PF02272 DHHA1 domain DY252_13995 PF01411 tRNA synthetases class II (A) DY252_14000 PF01266 FAD dependent oxidoreductase DY252_14000 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DY252_14025 PF07690 Major Facilitator Superfamily DY252_14035 PF04954 Siderophore-interacting protein DY252_14035 PF08021 Siderophore-interacting FAD-binding domain DY252_14045 PF08240 Alcohol dehydrogenase GroES-like domain DY252_14045 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DY252_14085 PF01494 FAD binding domain DY252_14110 PF00128 Alpha amylase, catalytic domain DY252_14115 PF00205 Thiamine pyrophosphate enzyme, central domain DY252_14115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DY252_14115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DY252_14125 PF00583 Acetyltransferase (GNAT) family DY252_14135 PF12833 Helix-turn-helix domain DY252_14135 PF12852 Cupin DY252_14140 PF07690 Major Facilitator Superfamily DY252_14165 PF08275 DNA primase catalytic core, N-terminal domain DY252_14165 PF00772 DnaB-like helicase N terminal domain DY252_14165 PF01807 CHC2 zinc finger DY252_14180 PF00392 Bacterial regulatory proteins, gntR family DY252_14180 PF07729 FCD domain DY252_14185 PF02653 Branched-chain amino acid transport system / permease component DY252_14190 PF02653 Branched-chain amino acid transport system / permease component DY252_14195 PF00005 ABC transporter DY252_14200 PF13407 Periplasmic binding protein domain DY252_14205 PF01263 Aldose 1-epimerase DY252_14215 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_14225 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_14230 PF07729 FCD domain DY252_14230 PF00392 Bacterial regulatory proteins, gntR family DY252_14235 PF01965 DJ-1/PfpI family DY252_14235 PF12833 Helix-turn-helix domain DY252_14255 PF05114 Protein of unknown function (DUF692) DY252_14320 PF11940 Domain of unknown function (DUF3458) Ig-like fold DY252_14320 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DY252_14320 PF01433 Peptidase family M1 domain DY252_14325 PF00196 Bacterial regulatory proteins, luxR family DY252_14325 PF00072 Response regulator receiver domain DY252_14335 PF12833 Helix-turn-helix domain DY252_14340 PF01810 LysE type translocator DY252_14355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_14355 PF00512 His Kinase A (phospho-acceptor) domain DY252_14365 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_14370 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_14380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_14380 PF02743 Cache domain DY252_14380 PF00672 HAMP domain DY252_14385 PF12833 Helix-turn-helix domain DY252_14385 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DY252_14390 PF07715 TonB-dependent Receptor Plug Domain DY252_14390 PF00593 TonB dependent receptor DY252_14395 PF01497 Periplasmic binding protein DY252_14410 PF02472 Biopolymer transport protein ExbD/TolR DY252_14415 PF02472 Biopolymer transport protein ExbD/TolR DY252_14420 PF01618 MotA/TolQ/ExbB proton channel family DY252_14435 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DY252_14440 PF01467 Cytidylyltransferase-like DY252_14445 PF00521 DNA gyrase/topoisomerase IV, subunit A DY252_14445 PF03989 DNA gyrase C-terminal domain, beta-propeller DY252_14475 PF01979 Amidohydrolase family DY252_14505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DY252_14505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DY252_14510 PF03466 LysR substrate binding domain DY252_14510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_14520 PF00155 Aminotransferase class I and II DY252_14530 PF00543 Nitrogen regulatory protein P-II DY252_14535 PF03951 Glutamine synthetase, beta-Grasp domain DY252_14535 PF00120 Glutamine synthetase, catalytic domain DY252_14540 PF13181 Tetratricopeptide repeat DY252_14545 PF08447 PAS fold DY252_14545 PF00990 Diguanylate cyclase, GGDEF domain DY252_14545 PF00563 EAL domain DY252_14545 PF13426 PAS domain DY252_14545 PF08448 PAS fold DY252_14545 PF05231 MASE1 DY252_14555 PF02566 OsmC-like protein DY252_14570 PF00962 Adenosine/AMP deaminase DY252_14575 PF13181 Tetratricopeptide repeat DY252_14590 PF00990 Diguanylate cyclase, GGDEF domain DY252_14590 PF13188 PAS domain DY252_14590 PF03707 Bacterial signalling protein N terminal repeat DY252_14590 PF00563 EAL domain DY252_14600 PF05368 NmrA-like family DY252_14605 PF07729 FCD domain DY252_14605 PF00392 Bacterial regulatory proteins, gntR family DY252_14610 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_14615 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_14615 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DY252_14620 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_14625 PF12833 Helix-turn-helix domain DY252_14640 PF03466 LysR substrate binding domain DY252_14640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_14645 PF13458 Periplasmic binding protein DY252_14650 PF00005 ABC transporter DY252_14650 PF12399 Branched-chain amino acid ATP-binding cassette transporter DY252_14665 PF02653 Branched-chain amino acid transport system / permease component DY252_14665 PF11862 Domain of unknown function (DUF3382) DY252_14685 PF00563 EAL domain DY252_14685 PF00990 Diguanylate cyclase, GGDEF domain DY252_14685 PF03707 Bacterial signalling protein N terminal repeat DY252_14730 PF03070 TENA/THI-4/PQQC family DY252_14735 PF04384 Iron-sulphur cluster assembly DY252_14740 PF00111 2Fe-2S iron-sulfur cluster binding domain DY252_14745 PF00012 Hsp70 protein DY252_14750 PF00226 DnaJ domain DY252_14750 PF07743 HSCB C-terminal oligomerisation domain DY252_14755 PF01521 Iron-sulphur cluster biosynthesis DY252_14760 PF01592 NifU-like N terminal domain DY252_14765 PF00266 Aminotransferase class-V DY252_14770 PF00266 Aminotransferase class-V DY252_14775 PF02082 Transcriptional regulator DY252_14780 PF00132 Bacterial transferase hexapeptide (six repeats) DY252_14780 PF06426 Serine acetyltransferase, N-terminal DY252_14785 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DY252_14790 PF03702 Anhydro-N-acetylmuramic acid kinase DY252_14795 PF00579 tRNA synthetases class I (W and Y) DY252_14805 PF08335 GlnD PII-uridylyltransferase DY252_14805 PF03710 Glutamate-ammonia ligase adenylyltransferase DY252_14810 PF00578 AhpC/TSA family DY252_14820 PF04305 Protein of unknown function (DUF455) DY252_14825 PF00107 Zinc-binding dehydrogenase DY252_14825 PF08240 Alcohol dehydrogenase GroES-like domain DY252_14830 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DY252_14830 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DY252_14835 PF02805 Metal binding domain of Ada DY252_14835 PF06029 AlkA N-terminal domain DY252_14835 PF12833 Helix-turn-helix domain DY252_14835 PF00730 HhH-GPD superfamily base excision DNA repair protein DY252_14840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_14840 PF00672 HAMP domain DY252_14865 PF00905 Penicillin binding protein transpeptidase domain DY252_14865 PF00912 Transglycosylase DY252_14865 PF17092 Penicillin-binding protein OB-like domain DY252_14870 PF01520 N-acetylmuramoyl-L-alanine amidase DY252_14870 PF11741 AMIN domain DY252_14875 PF12111 Polyribonucleotide phosphorylase C terminal DY252_14875 PF00575 S1 RNA binding domain DY252_14875 PF10150 Ribonuclease E/G family DY252_14880 PF00155 Aminotransferase class I and II DY252_14890 PF01435 Peptidase family M48 DY252_14900 PF06965 Na+/H+ antiporter 1 DY252_14900 PF13462 Thioredoxin DY252_14905 PF02597 ThiS family DY252_14905 PF05690 Thiazole biosynthesis protein ThiG DY252_14910 PF01220 Dehydroquinase class II DY252_14915 PF00364 Biotin-requiring enzyme DY252_14920 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DY252_14920 PF02785 Biotin carboxylase C-terminal domain DY252_14920 PF00289 Biotin carboxylase, N-terminal domain DY252_14925 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DY252_14935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_14935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DY252_14935 PF01842 ACT domain DY252_14945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_14945 PF02203 Tar ligand binding domain homologue DY252_14945 PF00672 HAMP domain DY252_14965 PF02617 ATP-dependent Clp protease adaptor protein ClpS DY252_14980 PF00768 D-alanyl-D-alanine carboxypeptidase DY252_14980 PF07943 Penicillin-binding protein 5, C-terminal domain DY252_14985 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DY252_14985 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DY252_14985 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DY252_14985 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DY252_14990 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DY252_14990 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DY252_14990 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DY252_14995 PF00483 Nucleotidyl transferase DY252_15000 PF00226 DnaJ domain DY252_15000 PF01556 DnaJ C terminal domain DY252_15000 PF00684 DnaJ central domain DY252_15010 PF13614 AAA domain DY252_15020 PF01266 FAD dependent oxidoreductase DY252_15025 PF03537 Glycoside-hydrolase family GH114 DY252_15030 PF01323 DSBA-like thioredoxin domain DY252_15035 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DY252_15035 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DY252_15040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DY252_15040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DY252_15040 PF00205 Thiamine pyrophosphate enzyme, central domain DY252_15050 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DY252_15050 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DY252_15060 PF04972 BON domain DY252_15065 PF00171 Aldehyde dehydrogenase family DY252_15065 PF01619 Proline dehydrogenase DY252_15065 PF14850 DNA-binding domain of Proline dehydrogenase DY252_15065 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DY252_15075 PF01037 Lrp/AsnC ligand binding domain DY252_15080 PF01323 DSBA-like thioredoxin domain DY252_15090 PF01039 Carboxyl transferase domain DY252_15095 PF00378 Enoyl-CoA hydratase/isomerase DY252_15100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DY252_15100 PF00364 Biotin-requiring enzyme DY252_15100 PF00289 Biotin carboxylase, N-terminal domain DY252_15100 PF02785 Biotin carboxylase C-terminal domain DY252_15105 PF00682 HMGL-like DY252_15125 PF00672 HAMP domain DY252_15125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_15135 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DY252_15135 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DY252_15160 PF03976 Polyphosphate kinase 2 (PPK2) DY252_15165 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DY252_15165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DY252_15170 PF03572 Peptidase family S41 DY252_15170 PF13180 PDZ domain DY252_15175 PF12806 Acetyl-CoA dehydrogenase C-terminal like DY252_15175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DY252_15175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DY252_15175 PF02770 Acyl-CoA dehydrogenase, middle domain DY252_15180 PF03739 Lipopolysaccharide export system permease LptF/LptG DY252_15190 PF04453 LPS transport system D DY252_15190 PF03968 OstA-like protein DY252_15195 PF09312 SurA N-terminal domain DY252_15195 PF00639 PPIC-type PPIASE domain DY252_15200 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DY252_15205 PF00398 Ribosomal RNA adenine dimethylase DY252_15210 PF00625 Guanylate kinase DY252_15215 PF03755 YicC-like family, N-terminal region DY252_15215 PF08340 Domain of unknown function (DUF1732) DY252_15220 PF00106 short chain dehydrogenase DY252_15225 PF02618 YceG-like family DY252_15230 PF02801 Beta-ketoacyl synthase, C-terminal domain DY252_15230 PF00109 Beta-ketoacyl synthase, N-terminal domain DY252_15235 PF00550 Phosphopantetheine attachment site DY252_15245 PF00698 Acyl transferase domain DY252_15250 PF01250 Ribosomal protein S6 DY252_15255 PF01084 Ribosomal protein S18 DY252_15265 PF03948 Ribosomal protein L9, C-terminal domain DY252_15265 PF01281 Ribosomal protein L9, N-terminal domain DY252_15270 PF03796 DnaB-like helicase C terminal domain DY252_15270 PF00772 DnaB-like helicase N terminal domain DY252_15275 PF00842 Alanine racemase, C-terminal domain DY252_15275 PF01168 Alanine racemase, N-terminal domain DY252_15280 PF02405 Permease MlaE DY252_15285 PF00005 ABC transporter DY252_15290 PF18073 Rubredoxin metal binding domain DY252_15290 PF06745 KaiC DY252_15300 PF13537 Glutamine amidotransferase domain DY252_15300 PF00156 Phosphoribosyl transferase domain DY252_15305 PF00106 short chain dehydrogenase DY252_15315 PF00005 ABC transporter DY252_15340 PF01926 50S ribosome-binding GTPase DY252_15340 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DY252_15345 PF13360 PQQ-like domain DY252_15375 PF02899 Phage integrase, N-terminal SAM-like domain DY252_15375 PF00589 Phage integrase family DY252_15405 PF00394 Multicopper oxidase DY252_15405 PF07732 Multicopper oxidase DY252_15405 PF07731 Multicopper oxidase DY252_15410 PF05275 Copper resistance protein B precursor (CopB) DY252_15435 PF04945 YHS domain DY252_15450 PF01252 Signal peptidase (SPase) II DY252_15460 PF13411 MerR HTH family regulatory protein DY252_15470 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DY252_15475 PF00291 Pyridoxal-phosphate dependent enzyme DY252_15480 PF00011 Hsp20/alpha crystallin family DY252_15485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DY252_15490 PF00118 TCP-1/cpn60 chaperonin family DY252_15495 PF00166 Chaperonin 10 Kd subunit DY252_15505 PF13411 MerR HTH family regulatory protein DY252_15515 PF01252 Signal peptidase (SPase) II DY252_15530 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DY252_15535 PF00483 Nucleotidyl transferase DY252_15540 PF04321 RmlD substrate binding domain DY252_15545 PF16363 GDP-mannose 4,6 dehydratase DY252_15555 PF01380 SIS domain DY252_15560 PF00132 Bacterial transferase hexapeptide (six repeats) DY252_15560 PF12804 MobA-like NTP transferase domain DY252_15565 PF13419 Haloacid dehalogenase-like hydrolase DY252_15570 PF00920 Dehydratase family DY252_15575 PF02653 Branched-chain amino acid transport system / permease component DY252_15580 PF00005 ABC transporter DY252_15585 PF13407 Periplasmic binding protein domain DY252_15590 PF03466 LysR substrate binding domain DY252_15590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_15600 PF13538 UvrD-like helicase C-terminal domain DY252_15610 PF01641 SelR domain DY252_15620 PF00300 Histidine phosphatase superfamily (branch 1) DY252_15625 PF12706 Beta-lactamase superfamily domain DY252_15630 PF08402 TOBE domain DY252_15630 PF00005 ABC transporter DY252_15635 PF00528 Binding-protein-dependent transport system inner membrane component DY252_15640 PF13416 Bacterial extracellular solute-binding protein DY252_15645 PF08220 DeoR-like helix-turn-helix domain DY252_15645 PF00455 DeoR C terminal sensor domain DY252_15725 PF00211 Adenylate and Guanylate cyclase catalytic domain DY252_15730 PF00512 His Kinase A (phospho-acceptor) domain DY252_15730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_15730 PF00672 HAMP domain DY252_15735 PF00072 Response regulator receiver domain DY252_15735 PF00486 Transcriptional regulatory protein, C terminal DY252_15750 PF02690 Na+/Pi-cotransporter DY252_15755 PF01266 FAD dependent oxidoreductase DY252_15755 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DY252_15760 PF00733 Asparagine synthase DY252_15760 PF13537 Glutamine amidotransferase domain DY252_15765 PF02954 Bacterial regulatory protein, Fis family DY252_15765 PF00158 Sigma-54 interaction domain DY252_15765 PF01590 GAF domain DY252_15770 PF00171 Aldehyde dehydrogenase family DY252_15780 PF03601 Conserved hypothetical protein 698 DY252_15790 PF01654 Cytochrome bd terminal oxidase subunit I DY252_15795 PF02322 Cytochrome bd terminal oxidase subunit II DY252_15805 PF00155 Aminotransferase class I and II DY252_15815 PF01507 Phosphoadenosine phosphosulfate reductase family DY252_15820 PF00009 Elongation factor Tu GTP binding domain DY252_15835 PF01066 CDP-alcohol phosphatidyltransferase DY252_15850 PF01541 GIY-YIG catalytic domain DY252_15865 PF01081 KDPG and KHG aldolase DY252_15870 PF05035 2-keto-3-deoxy-galactonokinase DY252_15880 PF00141 Peroxidase DY252_15915 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DY252_15955 PF05544 Proline racemase DY252_15960 PF00392 Bacterial regulatory proteins, gntR family DY252_15960 PF07729 FCD domain DY252_15965 PF05544 Proline racemase DY252_15970 PF01266 FAD dependent oxidoreductase DY252_15975 PF00701 Dihydrodipicolinate synthetase family DY252_15980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DY252_15980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DY252_15990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DY252_15990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DY252_16000 PF00171 Aldehyde dehydrogenase family DY252_16010 PF07690 Major Facilitator Superfamily DY252_16015 PF07715 TonB-dependent Receptor Plug Domain DY252_16015 PF00593 TonB dependent receptor DY252_16030 PF01266 FAD dependent oxidoreductase DY252_16030 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DY252_16035 PF17912 MalK OB fold domain DY252_16035 PF00005 ABC transporter DY252_16040 PF00005 ABC transporter DY252_16040 PF17912 MalK OB fold domain DY252_16045 PF00528 Binding-protein-dependent transport system inner membrane component DY252_16050 PF00528 Binding-protein-dependent transport system inner membrane component DY252_16070 PF12804 MobA-like NTP transferase domain DY252_16075 PF00893 Small Multidrug Resistance protein DY252_16080 PF03466 LysR substrate binding domain DY252_16080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_16095 PF01979 Amidohydrolase family DY252_16105 PF00528 Binding-protein-dependent transport system inner membrane component DY252_16110 PF00528 Binding-protein-dependent transport system inner membrane component DY252_16115 PF00005 ABC transporter DY252_16125 PF00202 Aminotransferase class-III DY252_16130 PF00440 Bacterial regulatory proteins, tetR family DY252_16130 PF08362 YcdC-like protein, C-terminal region DY252_16140 PF07687 Peptidase dimerisation domain DY252_16140 PF01546 Peptidase family M20/M25/M40 DY252_16145 PF01180 Dihydroorotate dehydrogenase DY252_16150 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DY252_16150 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_16155 PF03061 Thioesterase superfamily DY252_16160 PF05343 M42 glutamyl aminopeptidase DY252_16170 PF00005 ABC transporter DY252_16170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_16175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_16175 PF00005 ABC transporter DY252_16185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DY252_16195 PF01546 Peptidase family M20/M25/M40 DY252_16195 PF07687 Peptidase dimerisation domain DY252_16205 PF01235 Sodium:alanine symporter family DY252_16225 PF03600 Citrate transporter DY252_16235 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DY252_16235 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DY252_16250 PF08450 SMP-30/Gluconolactonase/LRE-like region DY252_16255 PF00005 ABC transporter DY252_16265 PF01497 Periplasmic binding protein DY252_16270 PF01032 FecCD transport family DY252_16295 PF00700 Bacterial flagellin C-terminal helical region DY252_16295 PF00669 Bacterial flagellin N-terminal helical region DY252_16300 PF01370 NAD dependent epimerase/dehydratase family DY252_16305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_16315 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_16320 PF00701 Dihydrodipicolinate synthetase family DY252_16330 PF08450 SMP-30/Gluconolactonase/LRE-like region DY252_16335 PF07729 FCD domain DY252_16335 PF00392 Bacterial regulatory proteins, gntR family DY252_16340 PF01263 Aldose 1-epimerase DY252_16345 PF00392 Bacterial regulatory proteins, gntR family DY252_16345 PF07729 FCD domain DY252_16350 PF13419 Haloacid dehalogenase-like hydrolase DY252_16355 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DY252_16355 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DY252_16360 PF00873 AcrB/AcrD/AcrF family DY252_16365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DY252_16365 PF00529 HlyD membrane-fusion protein of T1SS DY252_16380 PF00593 TonB dependent receptor DY252_16380 PF07715 TonB-dependent Receptor Plug Domain DY252_16390 PF04542 Sigma-70 region 2 DY252_16390 PF08281 Sigma-70, region 4 DY252_16390 PF12680 SnoaL-like domain DY252_16410 PF00797 N-acetyltransferase DY252_16415 PF01063 Amino-transferase class IV DY252_16425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_16425 PF03466 LysR substrate binding domain DY252_16430 PF00892 EamA-like transporter family DY252_16465 PF01180 Dihydroorotate dehydrogenase DY252_16470 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DY252_16475 PF01370 NAD dependent epimerase/dehydratase family DY252_16495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_16495 PF03466 LysR substrate binding domain DY252_16500 PF02567 Phenazine biosynthesis-like protein DY252_16510 PF13657 HipA N-terminal domain DY252_16510 PF07804 HipA-like C-terminal domain DY252_16530 PF12728 Helix-turn-helix domain DY252_16600 PF07484 Phage Tail Collar Domain DY252_16610 PF07484 Phage Tail Collar Domain DY252_16665 PF00672 HAMP domain DY252_16665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_16665 PF00512 His Kinase A (phospho-acceptor) domain DY252_16665 PF01627 Hpt domain DY252_16665 PF00072 Response regulator receiver domain DY252_16665 PF17149 Periplasmic sensor domain found in signal transduction proteins DY252_16670 PF00459 Inositol monophosphatase family DY252_16675 PF01063 Amino-transferase class IV DY252_16695 PF01619 Proline dehydrogenase DY252_16700 PF01921 tRNA synthetases class I (K) DY252_16705 PF00989 PAS fold DY252_16705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_16705 PF00512 His Kinase A (phospho-acceptor) domain DY252_16710 PF00990 Diguanylate cyclase, GGDEF domain DY252_16710 PF03707 Bacterial signalling protein N terminal repeat DY252_16710 PF00563 EAL domain DY252_16730 PF01047 MarR family DY252_16735 PF07859 alpha/beta hydrolase fold DY252_16740 PF02566 OsmC-like protein DY252_16755 PF09335 SNARE associated Golgi protein DY252_16765 PF01810 LysE type translocator DY252_16770 PF12833 Helix-turn-helix domain DY252_16770 PF02311 AraC-like ligand binding domain DY252_16775 PF04851 Type III restriction enzyme, res subunit DY252_16775 PF13307 Helicase C-terminal domain DY252_16780 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DY252_16780 PF03033 Glycosyltransferase family 28 N-terminal domain DY252_16800 PF03729 Short repeat of unknown function (DUF308) DY252_16805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_16805 PF03466 LysR substrate binding domain DY252_16810 PF00892 EamA-like transporter family DY252_16825 PF08448 PAS fold DY252_16825 PF08447 PAS fold DY252_16825 PF00990 Diguanylate cyclase, GGDEF domain DY252_16825 PF00563 EAL domain DY252_16835 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DY252_16835 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DY252_16860 PF03466 LysR substrate binding domain DY252_16860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_16865 PF07690 Major Facilitator Superfamily DY252_16870 PF03449 Transcription elongation factor, N-terminal DY252_16870 PF01272 Transcription elongation factor, GreA/GreB, C-term DY252_16875 PF08659 KR domain DY252_16875 PF16197 Ketoacyl-synthetase C-terminal extension DY252_16875 PF08990 Erythronolide synthase docking DY252_16875 PF00550 Phosphopantetheine attachment site DY252_16875 PF00698 Acyl transferase domain DY252_16875 PF08240 Alcohol dehydrogenase GroES-like domain DY252_16875 PF00109 Beta-ketoacyl synthase, N-terminal domain DY252_16875 PF02801 Beta-ketoacyl synthase, C-terminal domain DY252_16875 PF14765 Polyketide synthase dehydratase DY252_16880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_16880 PF03466 LysR substrate binding domain DY252_16885 PF00271 Helicase conserved C-terminal domain DY252_16885 PF08482 ATP-dependent helicase C-terminal DY252_16885 PF00270 DEAD/DEAH box helicase DY252_16885 PF04408 Helicase associated domain (HA2) DY252_16910 PF13614 AAA domain DY252_16910 PF13807 G-rich domain on putative tyrosine kinase DY252_16910 PF02706 Chain length determinant protein DY252_16920 PF03808 Glycosyl transferase WecB/TagA/CpsF family DY252_16955 PF00534 Glycosyl transferases group 1 DY252_16955 PF13439 Glycosyltransferase Family 4 DY252_16965 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DY252_16965 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DY252_16965 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DY252_16975 PF09334 tRNA synthetases class I (M) DY252_16975 PF13603 Leucyl-tRNA synthetase, Domain 2 DY252_16975 PF08264 Anticodon-binding domain of tRNA DY252_17005 PF00700 Bacterial flagellin C-terminal helical region DY252_17005 PF00669 Bacterial flagellin N-terminal helical region DY252_17005 PF07196 Flagellin hook IN motif DY252_17010 PF01209 ubiE/COQ5 methyltransferase family DY252_17020 PF01242 6-pyruvoyl tetrahydropterin synthase DY252_17025 PF04055 Radical SAM superfamily DY252_17045 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DY252_17075 PF01066 CDP-alcohol phosphatidyltransferase DY252_17080 PF02666 Phosphatidylserine decarboxylase DY252_17095 PF03641 Possible lysine decarboxylase DY252_17105 PF13192 Thioredoxin domain DY252_17105 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_17110 PF08220 DeoR-like helix-turn-helix domain DY252_17110 PF00455 DeoR C terminal sensor domain DY252_17115 PF08402 TOBE domain DY252_17115 PF00005 ABC transporter DY252_17120 PF13416 Bacterial extracellular solute-binding protein DY252_17125 PF00528 Binding-protein-dependent transport system inner membrane component DY252_17130 PF00528 Binding-protein-dependent transport system inner membrane component DY252_17135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_17135 PF03466 LysR substrate binding domain DY252_17140 PF05199 GMC oxidoreductase DY252_17140 PF00732 GMC oxidoreductase DY252_17150 PF00034 Cytochrome c DY252_17150 PF03150 Di-haem cytochrome c peroxidase DY252_17160 PF00753 Metallo-beta-lactamase superfamily DY252_17160 PF14864 Alkyl sulfatase C-terminal DY252_17160 PF14863 Alkyl sulfatase dimerisation DY252_17165 PF07690 Major Facilitator Superfamily DY252_17170 PF13533 Biotin-lipoyl like DY252_17185 PF02567 Phenazine biosynthesis-like protein DY252_17205 PF00180 Isocitrate/isopropylmalate dehydrogenase DY252_17215 PF04542 Sigma-70 region 2 DY252_17215 PF08281 Sigma-70, region 4 DY252_17230 PF14525 AraC-binding-like domain DY252_17230 PF12833 Helix-turn-helix domain DY252_17250 PF02678 Pirin DY252_17250 PF05726 Pirin C-terminal cupin domain DY252_17255 PF03358 NADPH-dependent FMN reductase DY252_17260 PF03009 Glycerophosphoryl diester phosphodiesterase family DY252_17270 PF01434 Peptidase family M41 DY252_17270 PF17862 AAA+ lid domain DY252_17270 PF00004 ATPase family associated with various cellular activities (AAA) DY252_17275 PF12833 Helix-turn-helix domain DY252_17280 PF08362 YcdC-like protein, C-terminal region DY252_17280 PF00440 Bacterial regulatory proteins, tetR family DY252_17290 PF00528 Binding-protein-dependent transport system inner membrane component DY252_17295 PF00528 Binding-protein-dependent transport system inner membrane component DY252_17300 PF08402 TOBE domain DY252_17300 PF00005 ABC transporter DY252_17310 PF00171 Aldehyde dehydrogenase family DY252_17320 PF10011 Predicted membrane protein (DUF2254) DY252_17335 PF01411 tRNA synthetases class II (A) DY252_17335 PF02272 DHHA1 domain DY252_17335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DY252_17350 PF07043 Protein of unknown function (DUF1328) DY252_17370 PF00154 recA bacterial DNA recombination protein DY252_17375 PF01402 Ribbon-helix-helix protein, copG family DY252_17375 PF08753 NikR C terminal nickel binding domain DY252_17420 PF01699 Sodium/calcium exchanger protein DY252_17425 PF08448 PAS fold DY252_17425 PF00512 His Kinase A (phospho-acceptor) domain DY252_17425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_17425 PF00072 Response regulator receiver domain DY252_17425 PF13188 PAS domain DY252_17430 PF00672 HAMP domain DY252_17430 PF12729 Four helix bundle sensory module for signal transduction DY252_17430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_17435 PF01312 FlhB HrpN YscU SpaS Family DY252_17440 PF01311 Bacterial export proteins, family 1 DY252_17445 PF01313 Bacterial export proteins, family 3 DY252_17450 PF02049 Flagellar hook-basal body complex protein FliE DY252_17455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DY252_17455 PF00460 Flagella basal body rod protein DY252_17460 PF00460 Flagella basal body rod protein DY252_17465 PF02599 Global regulator protein family DY252_17470 PF01312 FlhB HrpN YscU SpaS Family DY252_17485 PF00813 FliP family DY252_17490 PF01266 FAD dependent oxidoreductase DY252_17505 PF13677 Membrane MotB of proton-channel complex MotA/MotB DY252_17505 PF00691 OmpA family DY252_17520 PF00072 Response regulator receiver domain DY252_17535 PF02154 Flagellar motor switch protein FliM DY252_17535 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DY252_17540 PF03748 Flagellar basal body-associated protein FliL DY252_17545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DY252_17545 PF00460 Flagella basal body rod protein DY252_17550 PF00460 Flagella basal body rod protein DY252_17550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DY252_17560 PF02107 Flagellar L-ring protein DY252_17565 PF01258 Prokaryotic dksA/traR C4-type zinc finger DY252_17570 PF10768 Class II flagellar assembly regulator DY252_17575 PF02119 Flagellar P-ring protein DY252_17580 PF10135 Rod binding protein DY252_17590 PF07196 Flagellin hook IN motif DY252_17590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DY252_17595 PF00669 Bacterial flagellin N-terminal helical region DY252_17595 PF00700 Bacterial flagellin C-terminal helical region DY252_17600 PF02623 FliW protein DY252_17605 PF00669 Bacterial flagellin N-terminal helical region DY252_17605 PF00700 Bacterial flagellin C-terminal helical region DY252_17610 PF00700 Bacterial flagellin C-terminal helical region DY252_17610 PF07196 Flagellin hook IN motif DY252_17610 PF00669 Bacterial flagellin N-terminal helical region DY252_17615 PF00700 Bacterial flagellin C-terminal helical region DY252_17615 PF07196 Flagellin hook IN motif DY252_17615 PF00669 Bacterial flagellin N-terminal helical region DY252_17620 PF07196 Flagellin hook IN motif DY252_17620 PF00669 Bacterial flagellin N-terminal helical region DY252_17620 PF00700 Bacterial flagellin C-terminal helical region DY252_17625 PF00669 Bacterial flagellin N-terminal helical region DY252_17625 PF00700 Bacterial flagellin C-terminal helical region DY252_17640 PF02561 Flagellar protein FliS DY252_17650 PF13861 FlgD Tudor-like domain DY252_17650 PF13860 FlgD Ig-like domain DY252_17650 PF03963 Flagellar hook capping protein - N-terminal region DY252_17655 PF00460 Flagella basal body rod protein DY252_17655 PF07559 Flagellar basal body protein FlaE DY252_17655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DY252_17660 PF08345 Flagellar M-ring protein C-terminal DY252_17660 PF01514 Secretory protein of YscJ/FliF family DY252_17670 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DY252_17675 PF01618 MotA/TolQ/ExbB proton channel family DY252_17680 PF02954 Bacterial regulatory protein, Fis family DY252_17680 PF00158 Sigma-54 interaction domain DY252_17685 PF00771 FHIPEP family DY252_17695 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DY252_17710 PF18331 PKHD-type hydroxylase C-terminal domain DY252_17710 PF13640 2OG-Fe(II) oxygenase superfamily DY252_17715 PF00005 ABC transporter DY252_17720 PF00528 Binding-protein-dependent transport system inner membrane component DY252_17725 PF13416 Bacterial extracellular solute-binding protein DY252_17730 PF03741 Integral membrane protein TerC family DY252_17750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DY252_17750 PF02874 ATP synthase alpha/beta family, beta-barrel domain DY252_17750 PF18269 T3SS EscN ATPase C-terminal domain DY252_17755 PF00486 Transcriptional regulatory protein, C terminal DY252_17755 PF00072 Response regulator receiver domain DY252_17765 PF03705 CheR methyltransferase, all-alpha domain DY252_17765 PF01739 CheR methyltransferase, SAM binding domain DY252_17770 PF01339 CheB methylesterase DY252_17770 PF00072 Response regulator receiver domain DY252_17775 PF08769 Sporulation initiation factor Spo0A C terminal DY252_17775 PF00072 Response regulator receiver domain DY252_17785 PF07194 P2 response regulator binding domain DY252_17785 PF01627 Hpt domain DY252_17785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_17785 PF02895 Signal transducing histidine kinase, homodimeric domain DY252_17785 PF01584 CheW-like domain DY252_17790 PF10090 Histidine phosphotransferase C-terminal domain DY252_17805 PF06463 Molybdenum Cofactor Synthesis C DY252_17805 PF04055 Radical SAM superfamily DY252_17830 PF00892 EamA-like transporter family DY252_17835 PF00462 Glutaredoxin DY252_17840 PF00924 Mechanosensitive ion channel DY252_17850 PF00163 Ribosomal protein S4/S9 N-terminal domain DY252_17850 PF01479 S4 domain DY252_17865 PF00106 short chain dehydrogenase DY252_17870 PF00682 HMGL-like DY252_17870 PF08502 LeuA allosteric (dimerisation) domain DY252_17890 PF07690 Major Facilitator Superfamily DY252_17905 PF13411 MerR HTH family regulatory protein DY252_17910 PF02627 Carboxymuconolactone decarboxylase family DY252_17915 PF01406 tRNA synthetases class I (C) catalytic domain DY252_17915 PF09190 DALR domain DY252_17920 PF00749 tRNA synthetases class I (E and Q), catalytic domain DY252_17925 PF02540 NAD synthase DY252_17925 PF00795 Carbon-nitrogen hydrolase DY252_17930 PF01906 Putative heavy-metal-binding DY252_17935 PF01906 Putative heavy-metal-binding DY252_17950 PF01474 Class-II DAHP synthetase family DY252_17965 PF01205 Uncharacterized protein family UPF0029 DY252_17965 PF09186 Domain of unknown function (DUF1949) DY252_17970 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DY252_17970 PF00356 Bacterial regulatory proteins, lacI family DY252_17975 PF01202 Shikimate kinase DY252_17980 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_17990 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_18000 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_18000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DY252_18010 PF01966 HD domain DY252_18015 PF01507 Phosphoadenosine phosphosulfate reductase family DY252_18025 PF02628 Cytochrome oxidase assembly protein DY252_18035 PF01523 Putative modulator of DNA gyrase DY252_18050 PF00211 Adenylate and Guanylate cyclase catalytic domain DY252_18050 PF00672 HAMP domain DY252_18055 PF01212 Beta-eliminating lyase DY252_18060 PF01212 Beta-eliminating lyase DY252_18065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DY252_18070 PF00528 Binding-protein-dependent transport system inner membrane component DY252_18075 PF12911 N-terminal TM domain of oligopeptide transport permease C DY252_18075 PF00528 Binding-protein-dependent transport system inner membrane component DY252_18080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_18080 PF00005 ABC transporter DY252_18085 PF00005 ABC transporter DY252_18085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_18090 PF01810 LysE type translocator DY252_18110 PF10415 Fumarase C C-terminus DY252_18110 PF00206 Lyase DY252_18115 PF08220 DeoR-like helix-turn-helix domain DY252_18115 PF00455 DeoR C terminal sensor domain DY252_18125 PF00005 ABC transporter DY252_18130 PF00528 Binding-protein-dependent transport system inner membrane component DY252_18135 PF00528 Binding-protein-dependent transport system inner membrane component DY252_18140 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DY252_18140 PF01266 FAD dependent oxidoreductase DY252_18145 PF04107 Glutamate-cysteine ligase family 2(GCS2) DY252_18150 PF04452 RNA methyltransferase DY252_18155 PF01040 UbiA prenyltransferase family DY252_18175 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DY252_18195 PF01523 Putative modulator of DNA gyrase DY252_18200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_18200 PF00672 HAMP domain DY252_18205 PF00781 Diacylglycerol kinase catalytic domain DY252_18215 PF00534 Glycosyl transferases group 1 DY252_18215 PF13579 Glycosyl transferase 4-like domain DY252_18225 PF00005 ABC transporter DY252_18225 PF00664 ABC transporter transmembrane region DY252_18235 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DY252_18240 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DY252_18265 PF02601 Exonuclease VII, large subunit DY252_18265 PF13742 OB-fold nucleic acid binding domain DY252_18270 PF02844 Phosphoribosylglycinamide synthetase, N domain DY252_18270 PF02843 Phosphoribosylglycinamide synthetase, C domain DY252_18270 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DY252_18275 PF00005 ABC transporter DY252_18280 PF01032 FecCD transport family DY252_18290 PF04349 Periplasmic glucan biosynthesis protein, MdoG DY252_18295 PF12833 Helix-turn-helix domain DY252_18295 PF06719 AraC-type transcriptional regulator N-terminus DY252_18300 PF00106 short chain dehydrogenase DY252_18315 PF14437 MafB19-like deaminase DY252_18320 PF07722 Peptidase C26 DY252_18355 PF01048 Phosphorylase superfamily DY252_18355 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus DY252_18365 PF04542 Sigma-70 region 2 DY252_18365 PF08281 Sigma-70, region 4 DY252_18380 PF00210 Ferritin-like domain DY252_18385 PF00781 Diacylglycerol kinase catalytic domain DY252_18390 PF00448 SRP54-type protein, GTPase domain DY252_18390 PF02881 SRP54-type protein, helical bundle domain DY252_18395 PF00919 Uncharacterized protein family UPF0004 DY252_18395 PF04055 Radical SAM superfamily DY252_18400 PF08448 PAS fold DY252_18400 PF00990 Diguanylate cyclase, GGDEF domain DY252_18405 PF00696 Amino acid kinase family DY252_18410 PF01926 50S ribosome-binding GTPase DY252_18415 PF14849 YidC periplasmic domain DY252_18415 PF02096 60Kd inner membrane protein DY252_18420 PF01809 Putative membrane protein insertion efficiency factor DY252_18425 PF00825 Ribonuclease P DY252_18430 PF00468 Ribosomal protein L34 DY252_18440 PF00529 HlyD membrane-fusion protein of T1SS DY252_18445 PF00664 ABC transporter transmembrane region DY252_18445 PF00005 ABC transporter DY252_18450 PF03412 Peptidase C39 family DY252_18450 PF00664 ABC transporter transmembrane region DY252_18450 PF00005 ABC transporter DY252_18455 PF01479 S4 domain DY252_18465 PF09278 MerR, DNA binding DY252_18465 PF00376 MerR family regulatory protein DY252_18470 PF03358 NADPH-dependent FMN reductase DY252_18480 PF00183 Hsp90 protein DY252_18485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_18485 PF00672 HAMP domain DY252_18490 PF01966 HD domain DY252_18520 PF01557 Fumarylacetoacetate (FAA) hydrolase family DY252_18530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DY252_18530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_18545 PF05958 tRNA (Uracil-5-)-methyltransferase DY252_18550 PF00563 EAL domain DY252_18550 PF00990 Diguanylate cyclase, GGDEF domain DY252_18550 PF03707 Bacterial signalling protein N terminal repeat DY252_18555 PF03448 MgtE intracellular N domain DY252_18555 PF01769 Divalent cation transporter DY252_18555 PF00571 CBS domain DY252_18560 PF01515 Phosphate acetyl/butaryl transferase DY252_18560 PF00390 Malic enzyme, N-terminal domain DY252_18560 PF03949 Malic enzyme, NAD binding domain DY252_18570 PF03099 Biotin/lipoate A/B protein ligase family DY252_18575 PF00990 Diguanylate cyclase, GGDEF domain DY252_18605 PF02469 Fasciclin domain DY252_18620 PF00990 Diguanylate cyclase, GGDEF domain DY252_18620 PF00072 Response regulator receiver domain DY252_18625 PF03328 HpcH/HpaI aldolase/citrate lyase family DY252_18630 PF02525 Flavodoxin-like fold DY252_18635 PF03466 LysR substrate binding domain DY252_18635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_18640 PF08240 Alcohol dehydrogenase GroES-like domain DY252_18640 PF00107 Zinc-binding dehydrogenase DY252_18645 PF01638 HxlR-like helix-turn-helix DY252_18650 PF13673 Acetyltransferase (GNAT) domain DY252_18655 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DY252_18670 PF03412 Peptidase C39 family DY252_18670 PF00005 ABC transporter DY252_18670 PF00664 ABC transporter transmembrane region DY252_18680 PF00171 Aldehyde dehydrogenase family DY252_18685 PF00202 Aminotransferase class-III DY252_18695 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_18700 PF00155 Aminotransferase class I and II DY252_18700 PF00392 Bacterial regulatory proteins, gntR family DY252_18705 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DY252_18710 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_18720 PF00291 Pyridoxal-phosphate dependent enzyme DY252_18725 PF02423 Ornithine cyclodeaminase/mu-crystallin family DY252_18730 PF01321 Creatinase/Prolidase N-terminal domain DY252_18730 PF00557 Metallopeptidase family M24 DY252_18735 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DY252_18740 PF01037 Lrp/AsnC ligand binding domain DY252_18770 PF01425 Amidase DY252_18775 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_18785 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_18795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_18795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DY252_18800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DY252_18800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DY252_18810 PF13407 Periplasmic binding protein domain DY252_18815 PF02653 Branched-chain amino acid transport system / permease component DY252_18820 PF00005 ABC transporter DY252_18825 PF00356 Bacterial regulatory proteins, lacI family DY252_18835 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DY252_18840 PF03435 Saccharopine dehydrogenase NADP binding domain DY252_18840 PF16653 Saccharopine dehydrogenase C-terminal domain DY252_18850 PF00356 Bacterial regulatory proteins, lacI family DY252_18860 PF00528 Binding-protein-dependent transport system inner membrane component DY252_18865 PF00528 Binding-protein-dependent transport system inner membrane component DY252_18875 PF00005 ABC transporter DY252_18875 PF08402 TOBE domain DY252_18895 PF01799 [2Fe-2S] binding domain DY252_18895 PF00111 2Fe-2S iron-sulfur cluster binding domain DY252_18900 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DY252_18910 PF12804 MobA-like NTP transferase domain DY252_18910 PF00132 Bacterial transferase hexapeptide (six repeats) DY252_18915 PF00486 Transcriptional regulatory protein, C terminal DY252_18915 PF00072 Response regulator receiver domain DY252_18920 PF00512 His Kinase A (phospho-acceptor) domain DY252_18920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_18920 PF18719 ArlS sensor domain DY252_18930 PF00005 ABC transporter DY252_18940 PF13458 Periplasmic binding protein DY252_18950 PF07729 FCD domain DY252_18950 PF00392 Bacterial regulatory proteins, gntR family DY252_18960 PF14497 Glutathione S-transferase, C-terminal domain DY252_18960 PF02798 Glutathione S-transferase, N-terminal domain DY252_18970 PF04209 homogentisate 1,2-dioxygenase DY252_18985 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_18995 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_19005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DY252_19010 PF01037 Lrp/AsnC ligand binding domain DY252_19015 PF00005 ABC transporter DY252_19020 PF00005 ABC transporter DY252_19020 PF12399 Branched-chain amino acid ATP-binding cassette transporter DY252_19030 PF02653 Branched-chain amino acid transport system / permease component DY252_19040 PF01381 Helix-turn-helix DY252_19040 PF09856 Predicted transcriptional regulator (DUF2083) DY252_19040 PF06114 IrrE N-terminal-like domain DY252_19045 PF00072 Response regulator receiver domain DY252_19045 PF00486 Transcriptional regulatory protein, C terminal DY252_19055 PF13426 PAS domain DY252_19055 PF00512 His Kinase A (phospho-acceptor) domain DY252_19055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_19055 PF00672 HAMP domain DY252_19060 PF00171 Aldehyde dehydrogenase family DY252_19075 PF01557 Fumarylacetoacetate (FAA) hydrolase family DY252_19085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DY252_19085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_19090 PF07702 UTRA domain DY252_19090 PF00392 Bacterial regulatory proteins, gntR family DY252_19095 PF01979 Amidohydrolase family DY252_19100 PF01979 Amidohydrolase family DY252_19105 PF00221 Aromatic amino acid lyase DY252_19115 PF01175 Urocanase Rossmann-like domain DY252_19115 PF17392 Urocanase C-terminal domain DY252_19115 PF17391 Urocanase N-terminal domain DY252_19120 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_19130 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_19140 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_19155 PF00144 Beta-lactamase DY252_19165 PF13193 AMP-binding enzyme C-terminal domain DY252_19165 PF00501 AMP-binding enzyme DY252_19170 PF00106 short chain dehydrogenase DY252_19175 PF00378 Enoyl-CoA hydratase/isomerase DY252_19180 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_19195 PF08722 TnsA endonuclease N terminal DY252_19195 PF08721 TnsA endonuclease C terminal DY252_19200 PF00665 Integrase core domain DY252_19205 PF13401 AAA domain DY252_19205 PF11426 Tn7 transposition regulator TnsC DY252_19210 PF13358 DDE superfamily endonuclease DY252_19215 PF00005 ABC transporter DY252_19225 PF00528 Binding-protein-dependent transport system inner membrane component DY252_19230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_19230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DY252_19235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_19235 PF03466 LysR substrate binding domain DY252_19240 PF01609 Transposase DDE domain DY252_19240 PF05598 Transposase domain (DUF772) DY252_19245 PF00158 Sigma-54 interaction domain DY252_19245 PF00072 Response regulator receiver domain DY252_19270 PF01548 Transposase DY252_19270 PF02371 Transposase IS116/IS110/IS902 family DY252_19275 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_19280 PF12802 MarR family DY252_19290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DY252_19290 PF12806 Acetyl-CoA dehydrogenase C-terminal like DY252_19290 PF02770 Acyl-CoA dehydrogenase, middle domain DY252_19290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DY252_19295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DY252_19295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DY252_19300 PF01791 DeoC/LacD family aldolase DY252_19305 PF01266 FAD dependent oxidoreductase DY252_19305 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DY252_19310 PF00248 Aldo/keto reductase family DY252_19315 PF04198 Putative sugar-binding domain DY252_19320 PF02653 Branched-chain amino acid transport system / permease component DY252_19325 PF00005 ABC transporter DY252_19335 PF00512 His Kinase A (phospho-acceptor) domain DY252_19335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_19340 PF00158 Sigma-54 interaction domain DY252_19340 PF00072 Response regulator receiver domain DY252_19340 PF02954 Bacterial regulatory protein, Fis family DY252_19355 PF02653 Branched-chain amino acid transport system / permease component DY252_19365 PF00005 ABC transporter DY252_19370 PF00005 ABC transporter DY252_19375 PF00465 Iron-containing alcohol dehydrogenase DY252_19380 PF00171 Aldehyde dehydrogenase family DY252_19385 PF00465 Iron-containing alcohol dehydrogenase DY252_19390 PF00248 Aldo/keto reductase family DY252_19395 PF02734 DAK2 domain DY252_19400 PF02733 Dak1 domain DY252_19405 PF02653 Branched-chain amino acid transport system / permease component DY252_19410 PF00005 ABC transporter DY252_19415 PF13407 Periplasmic binding protein domain DY252_19420 PF02653 Branched-chain amino acid transport system / permease component DY252_19425 PF00356 Bacterial regulatory proteins, lacI family DY252_19435 PF09335 SNARE associated Golgi protein DY252_19440 PF02600 Disulfide bond formation protein DsbB DY252_19445 PF12833 Helix-turn-helix domain DY252_19445 PF02311 AraC-like ligand binding domain DY252_19450 PF07715 TonB-dependent Receptor Plug Domain DY252_19450 PF00593 TonB dependent receptor DY252_19460 PF00830 Ribosomal L28 family DY252_19470 PF00563 EAL domain DY252_19470 PF00990 Diguanylate cyclase, GGDEF domain DY252_19470 PF03707 Bacterial signalling protein N terminal repeat DY252_19475 PF00749 tRNA synthetases class I (E and Q), catalytic domain DY252_19480 PF06213 Cobalamin biosynthesis protein CobT DY252_19480 PF11775 Cobalamin biosynthesis protein CobT VWA domain DY252_19485 PF12556 Cobaltochelatase CobS subunit N terminal DY252_19485 PF08406 CbbQ/NirQ/NorQ C-terminal DY252_19485 PF07728 AAA domain (dynein-related subfamily) DY252_19490 PF00226 DnaJ domain DY252_19495 PF01722 BolA-like protein DY252_19500 PF07995 Glucose / Sorbosone dehydrogenase DY252_19520 PF00571 CBS domain DY252_19525 PF03471 Transporter associated domain DY252_19525 PF00571 CBS domain DY252_19525 PF01595 Cyclin M transmembrane N-terminal domain DY252_19530 PF01761 3-dehydroquinate synthase DY252_19535 PF01202 Shikimate kinase DY252_19545 PF00589 Phage integrase family DY252_19545 PF02899 Phage integrase, N-terminal SAM-like domain DY252_19550 PF00990 Diguanylate cyclase, GGDEF domain DY252_19550 PF00563 EAL domain DY252_19550 PF13426 PAS domain DY252_19565 PF01966 HD domain DY252_19565 PF01743 Poly A polymerase head domain DY252_19565 PF12627 Probable RNA and SrmB- binding site of polymerase A DY252_19575 PF00293 NUDIX domain DY252_19585 PF17863 AAA lid domain DY252_19585 PF07726 ATPase family associated with various cellular activities (AAA) DY252_19605 PF03466 LysR substrate binding domain DY252_19605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_19610 PF13409 Glutathione S-transferase, N-terminal domain DY252_19615 PF00430 ATP synthase B/B' CF(0) DY252_19620 PF00430 ATP synthase B/B' CF(0) DY252_19625 PF00137 ATP synthase subunit C DY252_19630 PF00119 ATP synthase A chain DY252_19635 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter DY252_19645 PF02463 RecF/RecN/SMC N terminal domain DY252_19650 PF06965 Na+/H+ antiporter 1 DY252_19650 PF13462 Thioredoxin DY252_19660 PF14815 NUDIX domain DY252_19660 PF00730 HhH-GPD superfamily base excision DNA repair protein DY252_19670 PF18755 Restriction Enzyme Adenine Methylase Associated DY252_19670 PF01555 DNA methylase DY252_19690 PF02653 Branched-chain amino acid transport system / permease component DY252_19700 PF07969 Amidohydrolase family DY252_19705 PF01613 Flavin reductase like domain DY252_19715 PF18125 RlmM ferredoxin-like domain DY252_19715 PF01728 FtsJ-like methyltransferase DY252_19725 PF02910 Fumarate reductase flavoprotein C-term DY252_19725 PF00890 FAD binding domain DY252_19740 PF03547 Membrane transport protein DY252_19745 PF00664 ABC transporter transmembrane region DY252_19745 PF00005 ABC transporter DY252_19750 PF00171 Aldehyde dehydrogenase family DY252_19755 PF01467 Cytidylyltransferase-like DY252_19765 PF02590 Predicted SPOUT methyltransferase DY252_19770 PF16591 Helical bimodular sensor domain DY252_19770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_19770 PF00672 HAMP domain DY252_19780 PF08220 DeoR-like helix-turn-helix domain DY252_19780 PF00455 DeoR C terminal sensor domain DY252_19785 PF00202 Aminotransferase class-III DY252_19800 PF01872 RibD C-terminal domain DY252_19805 PF03315 Serine dehydratase beta chain DY252_19805 PF03313 Serine dehydratase alpha chain DY252_19810 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DY252_19810 PF01676 Metalloenzyme superfamily DY252_19815 PF01551 Peptidase family M23 DY252_19820 PF13180 PDZ domain DY252_19820 PF03572 Peptidase family S41 DY252_19830 PF00293 NUDIX domain DY252_19840 PF13649 Methyltransferase domain DY252_19860 PF00162 Phosphoglycerate kinase DY252_19865 PF01678 Diaminopimelate epimerase DY252_19875 PF00106 short chain dehydrogenase DY252_19890 PF00115 Cytochrome C and Quinol oxidase polypeptide I DY252_19905 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DY252_19905 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DY252_19905 PF00034 Cytochrome c DY252_19910 PF12801 4Fe-4S binding domain DY252_19910 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DY252_19910 PF13746 4Fe-4S dicluster domain DY252_19925 PF03597 Cytochrome oxidase maturation protein cbb3-type DY252_19930 PF00027 Cyclic nucleotide-binding domain DY252_19930 PF00325 Bacterial regulatory proteins, crp family DY252_19935 PF02548 Ketopantoate hydroxymethyltransferase DY252_19940 PF02569 Pantoate-beta-alanine ligase DY252_19945 PF02881 SRP54-type protein, helical bundle domain DY252_19945 PF02978 Signal peptide binding domain DY252_19945 PF00448 SRP54-type protein, GTPase domain DY252_19950 PF00886 Ribosomal protein S16 DY252_19955 PF01782 RimM N-terminal domain DY252_19955 PF05239 PRC-barrel domain DY252_19960 PF01746 tRNA (Guanine-1)-methyltransferase DY252_19965 PF01245 Ribosomal protein L19 DY252_19970 PF00330 Aconitase family (aconitate hydratase) DY252_19980 PF00694 Aconitase C-terminal domain DY252_19985 PF00180 Isocitrate/isopropylmalate dehydrogenase DY252_19990 PF08281 Sigma-70, region 4 DY252_19990 PF04542 Sigma-70 region 2 DY252_19990 PF12680 SnoaL-like domain DY252_19995 PF02627 Carboxymuconolactone decarboxylase family DY252_20010 PF02774 Semialdehyde dehydrogenase, dimerisation domain DY252_20010 PF01118 Semialdehyde dehydrogenase, NAD binding domain DY252_20025 PF00528 Binding-protein-dependent transport system inner membrane component DY252_20030 PF00528 Binding-protein-dependent transport system inner membrane component DY252_20035 PF08402 TOBE domain DY252_20035 PF00005 ABC transporter DY252_20050 PF03600 Citrate transporter DY252_20050 PF02080 TrkA-C domain DY252_20060 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DY252_20060 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DY252_20065 PF02594 Uncharacterised ACR, YggU family COG1872 DY252_20070 PF02325 YGGT family DY252_20075 PF00958 GMP synthase C terminal domain DY252_20075 PF00117 Glutamine amidotransferase class-I DY252_20075 PF13673 Acetyltransferase (GNAT) domain DY252_20075 PF13302 Acetyltransferase (GNAT) domain DY252_20075 PF03352 Methyladenine glycosylase DY252_20080 PF00356 Bacterial regulatory proteins, lacI family DY252_20090 PF02321 Outer membrane efflux protein DY252_20095 PF00873 AcrB/AcrD/AcrF family DY252_20100 PF13533 Biotin-lipoyl like DY252_20105 PF00672 HAMP domain DY252_20105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_20120 PF00491 Arginase family DY252_20125 PF03466 LysR substrate binding domain DY252_20125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_20140 PF00009 Elongation factor Tu GTP binding domain DY252_20140 PF03144 Elongation factor Tu domain 2 DY252_20140 PF16658 Class II release factor RF3, C-terminal domain DY252_20160 PF01758 Sodium Bile acid symporter family DY252_20175 PF02562 PhoH-like protein DY252_20180 PF16916 Dimerisation domain of Zinc Transporter DY252_20180 PF01545 Cation efflux family DY252_20185 PF01578 Cytochrome C assembly protein DY252_20185 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DY252_20195 PF00072 Response regulator receiver domain DY252_20205 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DY252_20210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DY252_20210 PF02874 ATP synthase alpha/beta family, beta-barrel domain DY252_20215 PF00231 ATP synthase DY252_20220 PF02874 ATP synthase alpha/beta family, beta-barrel domain DY252_20220 PF00306 ATP synthase alpha/beta chain, C terminal domain DY252_20220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DY252_20225 PF00213 ATP synthase delta (OSCP) subunit DY252_20230 PF00043 Glutathione S-transferase, C-terminal domain DY252_20230 PF02798 Glutathione S-transferase, N-terminal domain DY252_20245 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DY252_20245 PF18074 Primosomal protein N C-terminal domain DY252_20245 PF17764 3′ DNA-binding domain (3′BD) DY252_20245 PF00270 DEAD/DEAH box helicase DY252_20250 PF00923 Transaldolase/Fructose-6-phosphate aldolase DY252_20260 PF02899 Phage integrase, N-terminal SAM-like domain DY252_20260 PF00589 Phage integrase family DY252_20275 PF00043 Glutathione S-transferase, C-terminal domain DY252_20275 PF13417 Glutathione S-transferase, N-terminal domain DY252_20285 PF00120 Glutamine synthetase, catalytic domain DY252_20295 PF02445 Quinolinate synthetase A protein DY252_20300 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DY252_20300 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DY252_20305 PF00293 NUDIX domain DY252_20315 PF12794 Mechanosensitive ion channel inner membrane domain 1 DY252_20315 PF00924 Mechanosensitive ion channel DY252_20315 PF12795 Mechanosensitive ion channel porin domain DY252_20320 PF01544 CorA-like Mg2+ transporter protein DY252_20325 PF03969 AFG1-like ATPase DY252_20330 PF00056 lactate/malate dehydrogenase, NAD binding domain DY252_20330 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DY252_20335 PF08442 ATP-grasp domain DY252_20335 PF00549 CoA-ligase DY252_20340 PF00549 CoA-ligase DY252_20340 PF02629 CoA binding domain DY252_20345 PF02779 Transketolase, pyrimidine binding domain DY252_20345 PF00676 Dehydrogenase E1 component DY252_20345 PF16078 2-oxoglutarate dehydrogenase N-terminus DY252_20345 PF16870 2-oxoglutarate dehydrogenase C-terminal DY252_20350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DY252_20350 PF02817 e3 binding domain DY252_20350 PF00364 Biotin-requiring enzyme DY252_20355 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_20355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DY252_20360 PF02142 MGS-like domain DY252_20370 PF00849 RNA pseudouridylate synthase DY252_20380 PF00106 short chain dehydrogenase DY252_20410 PF01593 Flavin containing amine oxidoreductase DY252_20415 PF04545 Sigma-70, region 4 DY252_20415 PF04542 Sigma-70 region 2 DY252_20420 PF12973 ChrR Cupin-like domain DY252_20425 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DY252_20430 PF00849 RNA pseudouridylate synthase DY252_20450 PF00990 Diguanylate cyclase, GGDEF domain DY252_20455 PF00990 Diguanylate cyclase, GGDEF domain DY252_20455 PF00072 Response regulator receiver domain DY252_20470 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_20490 PF01274 Malate synthase DY252_20495 PF00557 Metallopeptidase family M24 DY252_20500 PF00990 Diguanylate cyclase, GGDEF domain DY252_20500 PF00563 EAL domain DY252_20500 PF03707 Bacterial signalling protein N terminal repeat DY252_20505 PF00775 Dioxygenase DY252_20510 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DY252_20510 PF00775 Dioxygenase DY252_20515 PF03466 LysR substrate binding domain DY252_20515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_20520 PF03458 UPF0126 domain DY252_20525 PF00392 Bacterial regulatory proteins, gntR family DY252_20525 PF07702 UTRA domain DY252_20530 PF06754 Phosphonate metabolism protein PhnG DY252_20540 PF05861 Bacterial phosphonate metabolism protein (PhnI) DY252_20545 PF06007 Phosphonate metabolism protein PhnJ DY252_20550 PF00005 ABC transporter DY252_20555 PF00005 ABC transporter DY252_20560 PF07969 Amidohydrolase family DY252_20565 PF02885 Glycosyl transferase family, helical bundle domain DY252_20565 PF00591 Glycosyl transferase family, a/b domain DY252_20565 PF00625 Guanylate kinase DY252_20565 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DY252_20570 PF06299 Protein of unknown function (DUF1045) DY252_20580 PF00528 Binding-protein-dependent transport system inner membrane component DY252_20590 PF00005 ABC transporter DY252_20595 PF02615 Malate/L-lactate dehydrogenase DY252_20605 PF02028 BCCT, betaine/carnitine/choline family transporter DY252_20620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DY252_20630 PF12911 N-terminal TM domain of oligopeptide transport permease C DY252_20630 PF00528 Binding-protein-dependent transport system inner membrane component DY252_20635 PF00005 ABC transporter DY252_20635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DY252_20640 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DY252_20640 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DY252_20645 PF07859 alpha/beta hydrolase fold DY252_20650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DY252_20650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DY252_20655 PF05853 beta-keto acid cleavage enzyme DY252_20670 PF01965 DJ-1/PfpI family DY252_20670 PF12833 Helix-turn-helix domain DY252_20675 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DY252_20675 PF00056 lactate/malate dehydrogenase, NAD binding domain DY252_20680 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DY252_20680 PF00355 Rieske [2Fe-2S] domain DY252_20685 PF00175 Oxidoreductase NAD-binding domain DY252_20685 PF00111 2Fe-2S iron-sulfur cluster binding domain DY252_20685 PF00970 Oxidoreductase FAD-binding domain DY252_20690 PF12833 Helix-turn-helix domain DY252_20695 PF01012 Electron transfer flavoprotein domain DY252_20700 PF00766 Electron transfer flavoprotein FAD-binding domain DY252_20700 PF01012 Electron transfer flavoprotein domain DY252_20705 PF01842 ACT domain DY252_20705 PF00551 Formyl transferase DY252_20710 PF01266 FAD dependent oxidoreductase DY252_20710 PF16350 FAD dependent oxidoreductase central domain DY252_20710 PF01571 Aminomethyltransferase folate-binding domain DY252_20710 PF08669 Glycine cleavage T-protein C-terminal barrel domain DY252_20725 PF00072 Response regulator receiver domain DY252_20725 PF09308 LuxQ, periplasmic DY252_20725 PF00512 His Kinase A (phospho-acceptor) domain DY252_20725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_20750 PF12796 Ankyrin repeats (3 copies) DY252_20750 PF13606 Ankyrin repeat DY252_20760 PF00072 Response regulator receiver domain DY252_20760 PF00196 Bacterial regulatory proteins, luxR family DY252_20790 PF01548 Transposase DY252_20790 PF02371 Transposase IS116/IS110/IS902 family DY252_20810 PF00376 MerR family regulatory protein DY252_20810 PF09278 MerR, DNA binding DY252_20815 PF00873 AcrB/AcrD/AcrF family DY252_20820 PF13533 Biotin-lipoyl like DY252_20825 PF00872 Transposase, Mutator family DY252_20830 PF00403 Heavy-metal-associated domain DY252_20835 PF01022 Bacterial regulatory protein, arsR family DY252_20845 PF00970 Oxidoreductase FAD-binding domain DY252_20845 PF00111 2Fe-2S iron-sulfur cluster binding domain DY252_20845 PF00175 Oxidoreductase NAD-binding domain DY252_20860 PF00403 Heavy-metal-associated domain DY252_20865 PF00376 MerR family regulatory protein DY252_20865 PF09278 MerR, DNA binding DY252_20870 PF07690 Major Facilitator Superfamily DY252_20875 PF02583 Metal-sensitive transcriptional repressor DY252_20880 PF08534 Redoxin DY252_20880 PF00462 Glutaredoxin DY252_20890 PF01022 Bacterial regulatory protein, arsR family DY252_20895 PF00872 Transposase, Mutator family DY252_20900 PF01545 Cation efflux family DY252_20910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_20910 PF03466 LysR substrate binding domain DY252_20920 PF03743 Bacterial conjugation TrbI-like protein DY252_20935 PF04610 TrbL/VirB6 plasmid conjugal transfer protein DY252_20950 PF03135 CagE, TrbE, VirB family, component of type IV transporter system DY252_20965 PF00437 Type II/IV secretion system protein DY252_21000 PF13533 Biotin-lipoyl like DY252_21005 PF00873 AcrB/AcrD/AcrF family DY252_21015 PF01527 Transposase DY252_21040 PF02534 Type IV secretory system Conjugative DNA transfer DY252_21050 PF01464 Transglycosylase SLT domain DY252_21075 PF13614 AAA domain DY252_21105 PF05284 Protein of unknown function (DUF736) DY252_21135 PF00248 Aldo/keto reductase family DY252_21175 PF00004 ATPase family associated with various cellular activities (AAA) DY252_21195 PF00440 Bacterial regulatory proteins, tetR family DY252_21205 PF04002 RadC-like JAB domain DY252_21215 PF08401 Domain of unknown function (DUF1738) DY252_21215 PF18818 Metallopeptidase superfamily domain DY252_21215 PF13362 Toprim domain DY252_21220 PF13173 AAA domain DY252_21220 PF13635 Domain of unknown function (DUF4143) DY252_21230 PF00270 DEAD/DEAH box helicase DY252_21230 PF08148 DSHCT (NUC185) domain DY252_21230 PF00271 Helicase conserved C-terminal domain DY252_21250 PF01850 PIN domain DY252_21270 PF00589 Phage integrase family DY252_21285 PF18273 Type III R-M EcoP15I C-terminal domain DY252_21285 PF01555 DNA methylase DY252_21290 PF00176 SNF2 family N-terminal domain DY252_21290 PF00271 Helicase conserved C-terminal domain DY252_21300 PF02534 Type IV secretory system Conjugative DNA transfer DY252_21345 PF05284 Protein of unknown function (DUF736) DY252_21400 PF07804 HipA-like C-terminal domain DY252_21400 PF13657 HipA N-terminal domain DY252_21405 PF01381 Helix-turn-helix DY252_21415 PF08401 Domain of unknown function (DUF1738) DY252_21415 PF18818 Metallopeptidase superfamily domain DY252_21425 PF02534 Type IV secretory system Conjugative DNA transfer DY252_21470 PF03009 Glycerophosphoryl diester phosphodiesterase family DY252_21475 PF01554 MatE DY252_21495 PF01451 Low molecular weight phosphotyrosine protein phosphatase DY252_21510 PF01227 GTP cyclohydrolase I DY252_21515 PF04379 ApaG domain DY252_21520 PF01053 Cys/Met metabolism PLP-dependent enzyme DY252_21525 PF09335 SNARE associated Golgi protein DY252_21530 PF00403 Heavy-metal-associated domain DY252_21530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DY252_21530 PF07992 Pyridine nucleotide-disulphide oxidoreductase DY252_21535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_21535 PF00512 His Kinase A (phospho-acceptor) domain DY252_21535 PF00989 PAS fold DY252_21540 PF03352 Methyladenine glycosylase DY252_21550 PF17932 Tetracyclin repressor-like, C-terminal domain DY252_21550 PF00440 Bacterial regulatory proteins, tetR family DY252_21555 PF02386 Cation transport protein DY252_21560 PF00563 EAL domain DY252_21560 PF00990 Diguanylate cyclase, GGDEF domain DY252_21560 PF03707 Bacterial signalling protein N terminal repeat DY252_21565 PF02774 Semialdehyde dehydrogenase, dimerisation domain DY252_21565 PF01118 Semialdehyde dehydrogenase, NAD binding domain DY252_21575 PF02386 Cation transport protein DY252_21580 PF00565 Staphylococcal nuclease homologue DY252_21585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DY252_21590 PF08281 Sigma-70, region 4 DY252_21590 PF04542 Sigma-70 region 2 DY252_21600 PF07995 Glucose / Sorbosone dehydrogenase DY252_21605 PF00156 Phosphoribosyl transferase domain DY252_21615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DY252_21615 PF02203 Tar ligand binding domain homologue DY252_21615 PF00672 HAMP domain DY252_21625 PF03109 ABC1 family DY252_21630 PF01209 ubiE/COQ5 methyltransferase family DY252_21635 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DY252_21640 PF00520 Ion transport protein DY252_21640 PF00027 Cyclic nucleotide-binding domain DY252_21645 PF00117 Glutamine amidotransferase class-I DY252_21645 PF00425 chorismate binding enzyme DY252_21645 PF04715 Anthranilate synthase component I, N terminal region DY252_21655 PF05532 CsbD-like DY252_21670 PF01293 Phosphoenolpyruvate carboxykinase DY252_21680 PF13426 PAS domain DY252_21680 PF00990 Diguanylate cyclase, GGDEF domain DY252_21680 PF00563 EAL domain DY252_21690 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DY252_21690 PF14602 Hexapeptide repeat of succinyl-transferase DY252_21690 PF00132 Bacterial transferase hexapeptide (six repeats) DY252_21695 PF01546 Peptidase family M20/M25/M40 DY252_21695 PF07687 Peptidase dimerisation domain DY252_21710 PF13417 Glutathione S-transferase, N-terminal domain DY252_21715 PF03466 LysR substrate binding domain DY252_21715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_21730 PF09297 NADH pyrophosphatase zinc ribbon domain DY252_21730 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DY252_21730 PF00293 NUDIX domain DY252_21740 PF12170 DNA polymerase III tau subunit V interacting with alpha DY252_21740 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DY252_21740 PF12169 DNA polymerase III subunits gamma and tau domain III DY252_21745 PF02575 YbaB/EbfC DNA-binding family DY252_21750 PF02132 RecR protein DY252_21750 PF13662 Toprim domain DY252_21755 PF01220 Dehydroquinase class II DY252_21760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DY252_21765 PF07729 FCD domain DY252_21765 PF00392 Bacterial regulatory proteins, gntR family DY252_21775 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DY252_21785 PF03480 Bacterial extracellular solute-binding protein, family 7 DY252_21790 PF13545 Crp-like helix-turn-helix domain DY252_21790 PF00027 Cyclic nucleotide-binding domain DY252_21795 PF00072 Response regulator receiver domain DY252_21795 PF00211 Adenylate and Guanylate cyclase catalytic domain DY252_21820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DY252_21820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DY252_21825 PF00512 His Kinase A (phospho-acceptor) domain DY252_21825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_21830 PF01966 HD domain DY252_21850 PF05221 S-adenosyl-L-homocysteine hydrolase DY252_21850 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DY252_21855 PF05524 PEP-utilising enzyme, N-terminal DY252_21855 PF00391 PEP-utilising enzyme, mobile domain DY252_21855 PF02896 PEP-utilising enzyme, TIM barrel domain DY252_21860 PF00381 PTS HPr component phosphorylation site DY252_21865 PF03610 PTS system fructose IIA component DY252_21865 PF03830 PTS system sorbose subfamily IIB component DY252_21870 PF03668 P-loop ATPase protein family DY252_21880 PF13755 Sensor N-terminal transmembrane domain DY252_21880 PF13756 Stimulus-sensing domain DY252_21880 PF00512 His Kinase A (phospho-acceptor) domain DY252_21880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_21880 PF00672 HAMP domain DY252_21885 PF00486 Transcriptional regulatory protein, C terminal DY252_21885 PF00072 Response regulator receiver domain DY252_21890 PF02743 Cache domain DY252_21890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DY252_21890 PF00512 His Kinase A (phospho-acceptor) domain DY252_21895 PF02954 Bacterial regulatory protein, Fis family DY252_21895 PF00158 Sigma-54 interaction domain DY252_21895 PF00072 Response regulator receiver domain DY252_21900 PF16868 NMT1-like family DY252_21930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_21930 PF03466 LysR substrate binding domain DY252_21940 PF00551 Formyl transferase DY252_21940 PF02911 Formyl transferase, C-terminal domain DY252_21950 PF01327 Polypeptide deformylase DY252_21955 PF02646 RmuC family DY252_21960 PF13193 AMP-binding enzyme C-terminal domain DY252_21960 PF00501 AMP-binding enzyme DY252_21960 PF16177 Acetyl-coenzyme A synthetase N-terminus DY252_21965 PF03466 LysR substrate binding domain DY252_21965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_21970 PF03401 Tripartite tricarboxylate transporter family receptor DY252_21975 PF01970 Tripartite tricarboxylate transporter TctA family DY252_21980 PF00180 Isocitrate/isopropylmalate dehydrogenase DY252_21985 PF05161 MOFRL family DY252_21985 PF13660 Domain of unknown function (DUF4147) DY252_21990 PF00180 Isocitrate/isopropylmalate dehydrogenase DY252_21995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_21995 PF03466 LysR substrate binding domain DY252_22010 PF01047 MarR family DY252_22020 PF01740 STAS domain DY252_22020 PF00916 Sulfate permease family DY252_22025 PF00582 Universal stress protein family DY252_22045 PF01430 Hsp33 protein DY252_22050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DY252_22050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DY252_22055 PF00202 Aminotransferase class-III DY252_22060 PF01061 ABC-2 type transporter DY252_22065 PF02631 RecX family DY252_22070 PF03960 ArsC family DY252_22080 PF03788 LrgA family DY252_22085 PF04172 LrgB-like family DY252_22105 PF01416 tRNA pseudouridine synthase DY252_22110 PF00764 Arginosuccinate synthase DY252_22120 PF01810 LysE type translocator DY252_22125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DY252_22125 PF03466 LysR substrate binding domain DY252_22130 PF03401 Tripartite tricarboxylate transporter family receptor DY252_22140 PF01970 Tripartite tricarboxylate transporter TctA family DY252_22145 PF01546 Peptidase family M20/M25/M40 DY252_22145 PF07687 Peptidase dimerisation domain DY252_22160 PF00905 Penicillin binding protein transpeptidase domain DY252_22160 PF00912 Transglycosylase DY252_22165 PF00912 Transglycosylase