DY252_05955 ec71970d5315fdc7e7d77e0031829c5e 264 SUPERFAMILY SSF51206 29 166 3.01E-27 T 31-10-2018 IPR018490 Cyclic nucleotide-binding-like DY252_05955 ec71970d5315fdc7e7d77e0031829c5e 264 SMART SM00100 35 153 1.1E-19 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_05955 ec71970d5315fdc7e7d77e0031829c5e 264 SUPERFAMILY SSF46785 170 245 3.91E-7 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_05955 ec71970d5315fdc7e7d77e0031829c5e 264 Pfam PF13545 Crp-like helix-turn-helix domain 173 243 1.3E-9 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_05955 ec71970d5315fdc7e7d77e0031829c5e 264 Gene3D G3DSA:1.10.10.10 158 256 1.2E-19 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_05955 ec71970d5315fdc7e7d77e0031829c5e 264 Pfam PF00027 Cyclic nucleotide-binding domain 54 140 4.3E-16 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_05955 ec71970d5315fdc7e7d77e0031829c5e 264 Gene3D G3DSA:2.60.120.10 24 157 6.0E-26 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_05955 ec71970d5315fdc7e7d77e0031829c5e 264 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 62 78 - T 31-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site DY252_09030 4df8cffce43a01539f35a917dcfed41c 179 PIRSF PIRSF002161 1 179 2.1E-66 T 31-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09030 4df8cffce43a01539f35a917dcfed41c 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 31-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09030 4df8cffce43a01539f35a917dcfed41c 179 Gene3D G3DSA:3.30.1440.10 1 178 2.3E-80 T 31-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09030 4df8cffce43a01539f35a917dcfed41c 179 SUPERFAMILY SSF55282 3 177 4.24E-78 T 31-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09030 4df8cffce43a01539f35a917dcfed41c 179 Pfam PF00281 Ribosomal protein L5 24 80 1.9E-29 T 31-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09030 4df8cffce43a01539f35a917dcfed41c 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.7E-39 T 31-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09030 4df8cffce43a01539f35a917dcfed41c 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 42.98 T 31-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_16330 aea9e31fdaff8efab5debe7aebff7e38 304 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 160 180 5.3E-31 T 31-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DY252_16330 aea9e31fdaff8efab5debe7aebff7e38 304 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 20 37 5.3E-31 T 31-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DY252_16330 aea9e31fdaff8efab5debe7aebff7e38 304 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 137 159 5.3E-31 T 31-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DY252_16330 aea9e31fdaff8efab5debe7aebff7e38 304 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 95 116 5.3E-31 T 31-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DY252_16330 aea9e31fdaff8efab5debe7aebff7e38 304 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 242 260 5.3E-31 T 31-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DY252_16330 aea9e31fdaff8efab5debe7aebff7e38 304 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 200 217 5.3E-31 T 31-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DY252_16330 aea9e31fdaff8efab5debe7aebff7e38 304 SUPERFAMILY SSF63829 7 293 6.05E-67 T 31-10-2018 DY252_16330 aea9e31fdaff8efab5debe7aebff7e38 304 Gene3D G3DSA:2.120.10.30 5 295 3.1E-91 T 31-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DY252_16330 aea9e31fdaff8efab5debe7aebff7e38 304 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 19 260 7.6E-75 T 31-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region DY252_12665 e5f331498bfa771db4fc72a799b7b281 151 Gene3D G3DSA:2.60.40.2470 24 151 6.5E-40 T 31-10-2018 IPR038162 Ig-like SoxY domain superfamily DY252_12665 e5f331498bfa771db4fc72a799b7b281 151 Pfam PF13501 Sulfur oxidation protein SoxY 39 149 7.7E-39 T 31-10-2018 IPR032711 Ig-like SoxY domain DY252_12665 e5f331498bfa771db4fc72a799b7b281 151 PIRSF PIRSF010312 1 151 2.2E-49 T 31-10-2018 IPR016568 Sulphur oxidation, SoxY DY252_12665 e5f331498bfa771db4fc72a799b7b281 151 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 4 151 8.5E-47 T 31-10-2018 IPR016568 Sulphur oxidation, SoxY DY252_02735 b6625dd4cfee35129b4079f6cb73ef79 248 Pfam PF00005 ABC transporter 44 190 6.1E-33 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_02735 b6625dd4cfee35129b4079f6cb73ef79 248 SMART SM00382 53 239 2.1E-14 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_02735 b6625dd4cfee35129b4079f6cb73ef79 248 Gene3D G3DSA:3.40.50.300 22 248 3.1E-69 T 31-10-2018 DY252_02735 b6625dd4cfee35129b4079f6cb73ef79 248 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_02735 b6625dd4cfee35129b4079f6cb73ef79 248 SUPERFAMILY SSF52540 25 243 5.96E-67 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_11495 77eb79b4571fed29c845f5c1bcac41df 425 SUPERFAMILY SSF53756 18 401 1.49E-61 T 31-10-2018 DY252_11495 77eb79b4571fed29c845f5c1bcac41df 425 Pfam PF00534 Glycosyl transferases group 1 225 385 8.4E-32 T 31-10-2018 IPR001296 Glycosyl transferase, family 1 DY252_11495 77eb79b4571fed29c845f5c1bcac41df 425 Gene3D G3DSA:3.40.50.2000 204 392 2.0E-52 T 31-10-2018 DY252_11495 77eb79b4571fed29c845f5c1bcac41df 425 Gene3D G3DSA:3.40.50.2000 126 397 2.0E-52 T 31-10-2018 DY252_17915 013c07e227caa5b587162df29e5336dc 458 Gene3D G3DSA:3.40.50.620 1 308 1.8E-128 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_17915 013c07e227caa5b587162df29e5336dc 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 64 73 2.5E-30 T 31-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DY252_17915 013c07e227caa5b587162df29e5336dc 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 193 211 2.5E-30 T 31-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DY252_17915 013c07e227caa5b587162df29e5336dc 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 224 245 2.5E-30 T 31-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DY252_17915 013c07e227caa5b587162df29e5336dc 458 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 28 39 2.5E-30 T 31-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DY252_17915 013c07e227caa5b587162df29e5336dc 458 Pfam PF09190 DALR domain 345 401 1.2E-10 T 31-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 DY252_17915 013c07e227caa5b587162df29e5336dc 458 SUPERFAMILY SSF52374 6 315 1.37E-95 T 31-10-2018 DY252_17915 013c07e227caa5b587162df29e5336dc 458 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 316 1.2E-121 T 31-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 DY252_17915 013c07e227caa5b587162df29e5336dc 458 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 5 457 4.7E-160 T 31-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 DY252_17915 013c07e227caa5b587162df29e5336dc 458 SMART SM00840 342 401 3.3E-13 T 31-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 DY252_17915 013c07e227caa5b587162df29e5336dc 458 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 5 458 38.004 T 31-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 DY252_17915 013c07e227caa5b587162df29e5336dc 458 SUPERFAMILY SSF47323 319 457 4.32E-31 T 31-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_17915 013c07e227caa5b587162df29e5336dc 458 Gene3D G3DSA:1.20.120.640 309 457 4.1E-38 T 31-10-2018 DY252_01795 c9f7d26a3956e7c6ebf83b109ab5a38d 312 Gene3D G3DSA:1.10.10.10 7 93 2.3E-24 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_01795 c9f7d26a3956e7c6ebf83b109ab5a38d 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.0E-20 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_01795 c9f7d26a3956e7c6ebf83b109ab5a38d 312 Pfam PF03466 LysR substrate binding domain 94 297 7.4E-15 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_01795 c9f7d26a3956e7c6ebf83b109ab5a38d 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-9 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_01795 c9f7d26a3956e7c6ebf83b109ab5a38d 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-9 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_01795 c9f7d26a3956e7c6ebf83b109ab5a38d 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-9 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_01795 c9f7d26a3956e7c6ebf83b109ab5a38d 312 Gene3D G3DSA:3.40.190.10 166 269 4.3E-13 T 31-10-2018 DY252_01795 c9f7d26a3956e7c6ebf83b109ab5a38d 312 Gene3D G3DSA:3.40.190.10 104 295 4.3E-13 T 31-10-2018 DY252_01795 c9f7d26a3956e7c6ebf83b109ab5a38d 312 SUPERFAMILY SSF53850 94 302 1.28E-21 T 31-10-2018 DY252_01795 c9f7d26a3956e7c6ebf83b109ab5a38d 312 SUPERFAMILY SSF46785 3 86 1.34E-23 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_20020 fae3ae8cb921485942ddbc91569fc35d 436 Pfam PF01547 Bacterial extracellular solute-binding protein 39 327 3.2E-46 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_20020 fae3ae8cb921485942ddbc91569fc35d 436 SUPERFAMILY SSF53850 22 431 4.92E-76 T 31-10-2018 DY252_20020 fae3ae8cb921485942ddbc91569fc35d 436 Gene3D G3DSA:3.40.190.10 41 394 7.0E-148 T 31-10-2018 DY252_20020 fae3ae8cb921485942ddbc91569fc35d 436 Gene3D G3DSA:3.40.190.10 138 423 7.0E-148 T 31-10-2018 DY252_01510 642a0cc533690de6c3fd62b6d280b893 371 ProSitePatterns PS00534 Ferrochelatase signature. 201 220 - T 31-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DY252_01510 642a0cc533690de6c3fd62b6d280b893 371 Hamap MF_00323 Ferrochelatase [hemH]. 7 332 33.38 T 31-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DY252_01510 642a0cc533690de6c3fd62b6d280b893 371 SUPERFAMILY SSF53800 7 335 9.59E-92 T 31-10-2018 DY252_01510 642a0cc533690de6c3fd62b6d280b893 371 TIGRFAM TIGR00109 hemH: ferrochelatase 5 331 1.4E-81 T 31-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DY252_01510 642a0cc533690de6c3fd62b6d280b893 371 Gene3D G3DSA:3.40.50.1400 167 313 2.8E-101 T 31-10-2018 DY252_01510 642a0cc533690de6c3fd62b6d280b893 371 Gene3D G3DSA:3.40.50.1400 9 331 2.8E-101 T 31-10-2018 DY252_01510 642a0cc533690de6c3fd62b6d280b893 371 Pfam PF00762 Ferrochelatase 8 331 4.8E-105 T 31-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DY252_02535 6d3b74162044fa7b52ce71695001e882 601 SUPERFAMILY SSF54980 402 496 5.28E-25 T 31-10-2018 IPR035647 EF-G domain III/V-like DY252_02535 6d3b74162044fa7b52ce71695001e882 601 SMART SM00838 401 487 0.0028 T 31-10-2018 IPR000640 Elongation factor EFG, domain V-like DY252_02535 6d3b74162044fa7b52ce71695001e882 601 Gene3D G3DSA:3.30.70.870 289 370 1.3E-34 T 31-10-2018 DY252_02535 6d3b74162044fa7b52ce71695001e882 601 Pfam PF00679 Elongation factor G C-terminus 402 487 4.3E-20 T 31-10-2018 IPR000640 Elongation factor EFG, domain V-like DY252_02535 6d3b74162044fa7b52ce71695001e882 601 Pfam PF03144 Elongation factor Tu domain 2 208 278 7.7E-10 T 31-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DY252_02535 6d3b74162044fa7b52ce71695001e882 601 SUPERFAMILY SSF52540 1 247 2.34E-56 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_02535 6d3b74162044fa7b52ce71695001e882 601 Pfam PF00009 Elongation factor Tu GTP binding domain 5 184 4.8E-53 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_02535 6d3b74162044fa7b52ce71695001e882 601 SUPERFAMILY SSF54980 296 373 1.08E-18 T 31-10-2018 IPR035647 EF-G domain III/V-like DY252_02535 6d3b74162044fa7b52ce71695001e882 601 TIGRFAM TIGR01393 lepA: elongation factor 4 5 597 1.4E-292 T 31-10-2018 IPR006297 Elongation factor 4 GO:0005525 DY252_02535 6d3b74162044fa7b52ce71695001e882 601 Gene3D G3DSA:2.40.30.10 189 288 8.1E-31 T 31-10-2018 DY252_02535 6d3b74162044fa7b52ce71695001e882 601 PRINTS PR00315 GTP-binding elongation factor signature 52 60 3.3E-13 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_02535 6d3b74162044fa7b52ce71695001e882 601 PRINTS PR00315 GTP-binding elongation factor signature 129 138 3.3E-13 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_02535 6d3b74162044fa7b52ce71695001e882 601 PRINTS PR00315 GTP-binding elongation factor signature 93 104 3.3E-13 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_02535 6d3b74162044fa7b52ce71695001e882 601 PRINTS PR00315 GTP-binding elongation factor signature 77 87 3.3E-13 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_02535 6d3b74162044fa7b52ce71695001e882 601 PRINTS PR00315 GTP-binding elongation factor signature 9 22 3.3E-13 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_02535 6d3b74162044fa7b52ce71695001e882 601 Gene3D G3DSA:3.40.50.300 3 188 2.8E-72 T 31-10-2018 DY252_02535 6d3b74162044fa7b52ce71695001e882 601 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 6.0E-50 T 31-10-2018 IPR013842 GTP-binding protein LepA, C-terminal DY252_02535 6d3b74162044fa7b52ce71695001e882 601 Gene3D G3DSA:3.30.70.3380 371 481 6.4E-42 T 31-10-2018 DY252_02535 6d3b74162044fa7b52ce71695001e882 601 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 31-10-2018 IPR031157 Tr-type G domain, conserved site DY252_02535 6d3b74162044fa7b52ce71695001e882 601 Gene3D G3DSA:3.30.70.2570 482 556 2.0E-35 T 31-10-2018 IPR038363 LepA, C-terminal domain superfamily DY252_02535 6d3b74162044fa7b52ce71695001e882 601 Hamap MF_00071 Elongation factor 4 [lepA]. 1 600 301.586 T 31-10-2018 IPR006297 Elongation factor 4 GO:0005525 DY252_02535 6d3b74162044fa7b52ce71695001e882 601 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 174 1.3E-18 T 31-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DY252_02535 6d3b74162044fa7b52ce71695001e882 601 Pfam PF14492 Elongation Factor G, domain II 296 368 2.8E-6 T 31-10-2018 DY252_17435 5a8c3f6a4a0ce8a1e7349035f796b0a9 356 SUPERFAMILY SSF160544 245 351 7.32E-42 T 31-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DY252_17435 5a8c3f6a4a0ce8a1e7349035f796b0a9 356 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 3.9E-122 T 31-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 DY252_17435 5a8c3f6a4a0ce8a1e7349035f796b0a9 356 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 347 2.5E-123 T 31-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DY252_17435 5a8c3f6a4a0ce8a1e7349035f796b0a9 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 1.6E-42 T 31-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DY252_17435 5a8c3f6a4a0ce8a1e7349035f796b0a9 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 1.6E-42 T 31-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DY252_17435 5a8c3f6a4a0ce8a1e7349035f796b0a9 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.6E-42 T 31-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DY252_17435 5a8c3f6a4a0ce8a1e7349035f796b0a9 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 1.6E-42 T 31-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DY252_17435 5a8c3f6a4a0ce8a1e7349035f796b0a9 356 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.6E-42 T 31-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DY252_17435 5a8c3f6a4a0ce8a1e7349035f796b0a9 356 Gene3D G3DSA:3.40.1690.10 218 355 3.3E-58 T 31-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DY252_17250 8d4b4eb6ad55698b6f5a07debcba3f72 287 Pfam PF02678 Pirin 26 126 2.4E-36 T 31-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 DY252_17250 8d4b4eb6ad55698b6f5a07debcba3f72 287 Gene3D G3DSA:2.60.120.10 22 277 5.8E-97 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_17250 8d4b4eb6ad55698b6f5a07debcba3f72 287 Gene3D G3DSA:2.60.120.10 148 251 5.8E-97 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_17250 8d4b4eb6ad55698b6f5a07debcba3f72 287 PIRSF PIRSF006232 7 287 9.6E-97 T 31-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 DY252_17250 8d4b4eb6ad55698b6f5a07debcba3f72 287 SUPERFAMILY SSF51182 13 282 6.45E-86 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_17250 8d4b4eb6ad55698b6f5a07debcba3f72 287 Pfam PF05726 Pirin C-terminal cupin domain 181 281 2.6E-29 T 31-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 DY252_21675 bf37caa77d094f822b0ccde5311baf87 279 Gene3D G3DSA:3.40.190.10 133 229 2.3E-22 T 31-10-2018 DY252_21675 bf37caa77d094f822b0ccde5311baf87 279 SUPERFAMILY SSF53850 56 272 2.82E-31 T 31-10-2018 DY252_21675 bf37caa77d094f822b0ccde5311baf87 279 Gene3D G3DSA:3.40.190.10 57 270 2.3E-22 T 31-10-2018 DY252_21675 bf37caa77d094f822b0ccde5311baf87 279 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 56 271 2.4E-19 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_16035 5582be33bb9a065894393b282eb06d2a 366 Pfam PF00005 ABC transporter 19 160 9.1E-28 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_16035 5582be33bb9a065894393b282eb06d2a 366 SMART SM00382 27 212 2.1E-8 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_16035 5582be33bb9a065894393b282eb06d2a 366 Gene3D G3DSA:3.40.50.300 1 234 1.0E-60 T 31-10-2018 DY252_16035 5582be33bb9a065894393b282eb06d2a 366 SUPERFAMILY SSF52540 3 240 1.01E-66 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_16035 5582be33bb9a065894393b282eb06d2a 366 SUPERFAMILY SSF50331 236 352 2.69E-23 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_16035 5582be33bb9a065894393b282eb06d2a 366 Gene3D G3DSA:2.40.50.140 277 339 1.4E-12 T 31-10-2018 DY252_16035 5582be33bb9a065894393b282eb06d2a 366 Gene3D G3DSA:2.40.50.100 239 349 1.4E-12 T 31-10-2018 DY252_16035 5582be33bb9a065894393b282eb06d2a 366 Pfam PF08402 TOBE domain 274 346 1.4E-4 T 31-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DY252_20535 c8ffc7c25e4ac3f113ff371e833dbcd0 200 Gene3D G3DSA:3.40.50.11310 7 200 1.6E-59 T 31-10-2018 IPR038058 PhnH-like superfamily DY252_20535 c8ffc7c25e4ac3f113ff371e833dbcd0 200 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 11 198 2.7E-57 T 31-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 DY252_20535 c8ffc7c25e4ac3f113ff371e833dbcd0 200 PIRSF PIRSF020680 2 200 3.8E-60 T 31-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 DY252_20535 c8ffc7c25e4ac3f113ff371e833dbcd0 200 SUPERFAMILY SSF159709 18 198 1.06E-55 T 31-10-2018 IPR038058 PhnH-like superfamily DY252_20535 c8ffc7c25e4ac3f113ff371e833dbcd0 200 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 14 196 3.0E-53 T 31-10-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 DY252_06810 70219baf1b97ffff654648bdda91ddd7 687 SUPERFAMILY SSF109604 341 490 1.13E-9 T 31-10-2018 DY252_06810 70219baf1b97ffff654648bdda91ddd7 687 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 685 24.224 T 31-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DY252_06810 70219baf1b97ffff654648bdda91ddd7 687 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 685 8.6E-197 T 31-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DY252_06810 70219baf1b97ffff654648bdda91ddd7 687 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 543 1.1E-209 T 31-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DY252_06810 70219baf1b97ffff654648bdda91ddd7 687 Pfam PF05746 DALR anticodon binding domain 573 679 7.1E-8 T 31-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DY252_06810 70219baf1b97ffff654648bdda91ddd7 687 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 2.9E-31 T 31-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DY252_06810 70219baf1b97ffff654648bdda91ddd7 687 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 236 251 2.9E-31 T 31-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DY252_06810 70219baf1b97ffff654648bdda91ddd7 687 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 2.9E-31 T 31-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DY252_06810 70219baf1b97ffff654648bdda91ddd7 687 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 309 325 2.9E-31 T 31-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DY252_06810 70219baf1b97ffff654648bdda91ddd7 687 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 386 405 2.9E-31 T 31-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DY252_18950 624ed3ab082ad3cd6828391f00b981c6 237 Gene3D G3DSA:1.20.120.530 76 215 2.7E-26 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_18950 624ed3ab082ad3cd6828391f00b981c6 237 SUPERFAMILY SSF48008 78 208 5.23E-25 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_18950 624ed3ab082ad3cd6828391f00b981c6 237 Gene3D G3DSA:1.10.10.10 1 73 3.0E-19 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_18950 624ed3ab082ad3cd6828391f00b981c6 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.1E-5 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_18950 624ed3ab082ad3cd6828391f00b981c6 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.1E-5 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_18950 624ed3ab082ad3cd6828391f00b981c6 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 72 1.8E-16 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_18950 624ed3ab082ad3cd6828391f00b981c6 237 SMART SM00345 14 72 1.7E-12 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_18950 624ed3ab082ad3cd6828391f00b981c6 237 SUPERFAMILY SSF46785 6 76 3.02E-18 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_18950 624ed3ab082ad3cd6828391f00b981c6 237 SMART SM00895 82 204 6.5E-19 T 31-10-2018 IPR011711 GntR, C-terminal DY252_18950 624ed3ab082ad3cd6828391f00b981c6 237 Pfam PF07729 FCD domain 82 203 6.7E-23 T 31-10-2018 IPR011711 GntR, C-terminal DY252_04720 8cece1677ce1b63bc5e7fa3bbbb19cab 346 Pfam PF13416 Bacterial extracellular solute-binding protein 39 313 1.5E-32 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_04720 8cece1677ce1b63bc5e7fa3bbbb19cab 346 Gene3D G3DSA:3.40.190.10 28 316 3.3E-98 T 31-10-2018 DY252_04720 8cece1677ce1b63bc5e7fa3bbbb19cab 346 SUPERFAMILY SSF53850 24 345 1.51E-79 T 31-10-2018 DY252_04720 8cece1677ce1b63bc5e7fa3bbbb19cab 346 Gene3D G3DSA:3.40.190.10 129 342 3.3E-98 T 31-10-2018 DY252_04720 8cece1677ce1b63bc5e7fa3bbbb19cab 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 3.2E-36 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_04720 8cece1677ce1b63bc5e7fa3bbbb19cab 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 3.2E-36 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_04720 8cece1677ce1b63bc5e7fa3bbbb19cab 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 292 318 3.2E-36 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_04720 8cece1677ce1b63bc5e7fa3bbbb19cab 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 3.2E-36 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_04720 8cece1677ce1b63bc5e7fa3bbbb19cab 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 3.2E-36 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_04720 8cece1677ce1b63bc5e7fa3bbbb19cab 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 3.2E-36 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_04720 8cece1677ce1b63bc5e7fa3bbbb19cab 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 3.2E-36 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_04720 8cece1677ce1b63bc5e7fa3bbbb19cab 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 3.2E-36 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_04720 8cece1677ce1b63bc5e7fa3bbbb19cab 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 3.2E-36 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_04720 8cece1677ce1b63bc5e7fa3bbbb19cab 346 PIRSF PIRSF019574 1 346 1.1E-103 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_04425 92db5177fa62830ce72279da07ebb8db 545 Gene3D G3DSA:3.50.50.60 7 381 1.3E-209 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_04425 92db5177fa62830ce72279da07ebb8db 545 SUPERFAMILY SSF54373 207 303 3.65E-38 T 31-10-2018 DY252_04425 92db5177fa62830ce72279da07ebb8db 545 SUPERFAMILY SSF54862 444 545 2.87E-31 T 31-10-2018 DY252_04425 92db5177fa62830ce72279da07ebb8db 545 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 440 542 6.7E-52 T 31-10-2018 DY252_04425 92db5177fa62830ce72279da07ebb8db 545 Gene3D G3DSA:3.30.70.20 445 540 1.9E-42 T 31-10-2018 DY252_04425 92db5177fa62830ce72279da07ebb8db 545 SUPERFAMILY SSF51905 1 442 2.12E-55 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_04425 92db5177fa62830ce72279da07ebb8db 545 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 2.7E-5 T 31-10-2018 DY252_04425 92db5177fa62830ce72279da07ebb8db 545 Gene3D G3DSA:3.30.9.90 79 444 1.3E-209 T 31-10-2018 DY252_06440 958c4352a36fb0b292ccbefa8a193783 416 Gene3D G3DSA:3.30.420.40 198 356 1.3E-94 T 31-10-2018 DY252_06440 958c4352a36fb0b292ccbefa8a193783 416 SUPERFAMILY SSF53067 9 198 5.18E-37 T 31-10-2018 DY252_06440 958c4352a36fb0b292ccbefa8a193783 416 Gene3D G3DSA:3.30.1490.110 86 170 1.3E-94 T 31-10-2018 DY252_06440 958c4352a36fb0b292ccbefa8a193783 416 Pfam PF02491 SHS2 domain inserted in FTSA 86 162 1.8E-12 T 31-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 DY252_06440 958c4352a36fb0b292ccbefa8a193783 416 PIRSF PIRSF003101 2 416 2.3E-120 T 31-10-2018 IPR020823 Cell division protein FtsA DY252_06440 958c4352a36fb0b292ccbefa8a193783 416 Gene3D G3DSA:3.90.640.10 236 304 1.3E-94 T 31-10-2018 DY252_06440 958c4352a36fb0b292ccbefa8a193783 416 SUPERFAMILY SSF53067 201 381 1.91E-38 T 31-10-2018 DY252_06440 958c4352a36fb0b292ccbefa8a193783 416 SMART SM00842 11 197 5.2E-56 T 31-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 DY252_06440 958c4352a36fb0b292ccbefa8a193783 416 Hamap MF_02033 Cell division protein FtsA [ftsA]. 7 416 24.46 T 31-10-2018 IPR020823 Cell division protein FtsA DY252_06440 958c4352a36fb0b292ccbefa8a193783 416 Gene3D G3DSA:3.30.420.40 14 375 1.3E-94 T 31-10-2018 DY252_06440 958c4352a36fb0b292ccbefa8a193783 416 Pfam PF14450 Cell division protein FtsA 209 375 2.4E-22 T 31-10-2018 DY252_06440 958c4352a36fb0b292ccbefa8a193783 416 Pfam PF14450 Cell division protein FtsA 12 183 3.7E-8 T 31-10-2018 DY252_06440 958c4352a36fb0b292ccbefa8a193783 416 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 11 381 5.0E-100 T 31-10-2018 IPR020823 Cell division protein FtsA DY252_01295 68e0e9e05e0962c4e98e9d991661baec 242 Gene3D G3DSA:3.20.20.70 1 242 1.7E-81 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_01295 68e0e9e05e0962c4e98e9d991661baec 242 Pfam PF00977 Histidine biosynthesis protein 3 232 8.5E-74 T 31-10-2018 IPR006062 Histidine biosynthesis GO:0000105 DY252_01295 68e0e9e05e0962c4e98e9d991661baec 242 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 240 35.557 T 31-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 DY252_01295 68e0e9e05e0962c4e98e9d991661baec 242 SUPERFAMILY SSF51366 3 239 5.42E-69 T 31-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DY252_01295 68e0e9e05e0962c4e98e9d991661baec 242 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 236 8.9E-78 T 31-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 DY252_19780 20b8c9a3459edb22af1f5535f995bb3f 257 SUPERFAMILY SSF100950 75 236 4.19E-21 T 31-10-2018 IPR037171 NagB/RpiA transferase-like DY252_19780 20b8c9a3459edb22af1f5535f995bb3f 257 Gene3D G3DSA:1.10.10.10 1 58 3.1E-7 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_19780 20b8c9a3459edb22af1f5535f995bb3f 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 8.3E-10 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_19780 20b8c9a3459edb22af1f5535f995bb3f 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 8.3E-10 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_19780 20b8c9a3459edb22af1f5535f995bb3f 257 SMART SM01134 74 235 4.4E-42 T 31-10-2018 DY252_19780 20b8c9a3459edb22af1f5535f995bb3f 257 SUPERFAMILY SSF46785 8 62 1.06E-10 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_19780 20b8c9a3459edb22af1f5535f995bb3f 257 Pfam PF00455 DeoR C terminal sensor domain 76 234 1.9E-38 T 31-10-2018 IPR014036 DeoR C-terminal sensor domain DY252_19780 20b8c9a3459edb22af1f5535f995bb3f 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 31-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DY252_19780 20b8c9a3459edb22af1f5535f995bb3f 257 SMART SM00420 9 61 1.7E-15 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_19780 20b8c9a3459edb22af1f5535f995bb3f 257 Pfam PF08220 DeoR-like helix-turn-helix domain 9 61 3.9E-16 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_21965 9d5315cdec943cb8d8017e4e0a6e37ef 302 SUPERFAMILY SSF46785 7 111 1.55E-22 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_21965 9d5315cdec943cb8d8017e4e0a6e37ef 302 Pfam PF03466 LysR substrate binding domain 88 293 2.2E-42 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_21965 9d5315cdec943cb8d8017e4e0a6e37ef 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 2.9E-20 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_21965 9d5315cdec943cb8d8017e4e0a6e37ef 302 SUPERFAMILY SSF53850 90 296 1.23E-45 T 31-10-2018 DY252_21965 9d5315cdec943cb8d8017e4e0a6e37ef 302 Gene3D G3DSA:3.40.190.10 92 289 3.0E-63 T 31-10-2018 DY252_21965 9d5315cdec943cb8d8017e4e0a6e37ef 302 Gene3D G3DSA:1.10.10.10 4 89 4.5E-27 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_21965 9d5315cdec943cb8d8017e4e0a6e37ef 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.3E-7 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_21965 9d5315cdec943cb8d8017e4e0a6e37ef 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.3E-7 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_21965 9d5315cdec943cb8d8017e4e0a6e37ef 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.3E-7 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_21965 9d5315cdec943cb8d8017e4e0a6e37ef 302 Gene3D G3DSA:3.40.190.10 163 264 3.0E-63 T 31-10-2018 DY252_20845 cba0c157cc212e01e08e6c5a32c9c324 343 SUPERFAMILY SSF52343 202 331 1.06E-36 T 31-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DY252_20845 cba0c157cc212e01e08e6c5a32c9c324 343 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 83 2.1E-14 T 31-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DY252_20845 cba0c157cc212e01e08e6c5a32c9c324 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 134 146 1.2E-20 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_20845 cba0c157cc212e01e08e6c5a32c9c324 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 150 157 1.2E-20 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_20845 cba0c157cc212e01e08e6c5a32c9c324 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 209 228 1.2E-20 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_20845 cba0c157cc212e01e08e6c5a32c9c324 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 234 243 1.2E-20 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_20845 cba0c157cc212e01e08e6c5a32c9c324 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 298 306 1.2E-20 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_20845 cba0c157cc212e01e08e6c5a32c9c324 343 Pfam PF00970 Oxidoreductase FAD-binding domain 112 195 9.9E-9 T 31-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DY252_20845 cba0c157cc212e01e08e6c5a32c9c324 343 SUPERFAMILY SSF63380 102 195 6.58E-21 T 31-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DY252_20845 cba0c157cc212e01e08e6c5a32c9c324 343 Gene3D G3DSA:3.10.20.30 2 92 8.4E-25 T 31-10-2018 IPR012675 Beta-grasp domain superfamily DY252_20845 cba0c157cc212e01e08e6c5a32c9c324 343 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 31-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DY252_20845 cba0c157cc212e01e08e6c5a32c9c324 343 Pfam PF00175 Oxidoreductase NAD-binding domain 211 311 9.1E-18 T 31-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DY252_20845 cba0c157cc212e01e08e6c5a32c9c324 343 Gene3D G3DSA:2.40.30.10 98 195 5.4E-21 T 31-10-2018 DY252_20845 cba0c157cc212e01e08e6c5a32c9c324 343 SUPERFAMILY SSF54292 9 90 1.7E-23 T 31-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DY252_20845 cba0c157cc212e01e08e6c5a32c9c324 343 Gene3D G3DSA:3.40.50.80 201 331 1.2E-28 T 31-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DY252_05425 f12d18565b1804c0c2c725249834329a 711 Pfam PF02151 UvrB/uvrC motif 642 674 3.0E-8 T 31-10-2018 IPR001943 UVR domain GO:0005515 DY252_05425 f12d18565b1804c0c2c725249834329a 711 Pfam PF12344 Ultra-violet resistance protein B 568 609 1.4E-22 T 31-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain DY252_05425 f12d18565b1804c0c2c725249834329a 711 SUPERFAMILY SSF52540 21 429 2.02E-130 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_05425 f12d18565b1804c0c2c725249834329a 711 SUPERFAMILY SSF52540 48 603 1.64E-37 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_05425 f12d18565b1804c0c2c725249834329a 711 Gene3D G3DSA:3.40.50.300 294 430 1.4E-45 T 31-10-2018 DY252_05425 f12d18565b1804c0c2c725249834329a 711 SMART SM00487 25 447 1.7E-21 T 31-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DY252_05425 f12d18565b1804c0c2c725249834329a 711 SUPERFAMILY SSF46600 633 674 2.48E-11 T 31-10-2018 IPR036876 UVR domain superfamily DY252_05425 f12d18565b1804c0c2c725249834329a 711 SMART SM00490 476 562 2.6E-19 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_05425 f12d18565b1804c0c2c725249834329a 711 Gene3D G3DSA:3.40.50.300 431 605 9.1E-50 T 31-10-2018 DY252_05425 f12d18565b1804c0c2c725249834329a 711 Pfam PF04851 Type III restriction enzyme, res subunit 29 155 1.1E-10 T 31-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DY252_05425 f12d18565b1804c0c2c725249834329a 711 Pfam PF00271 Helicase conserved C-terminal domain 457 560 2.2E-17 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_05425 f12d18565b1804c0c2c725249834329a 711 Hamap MF_00204 UvrABC system protein B [uvrB]. 19 674 42.187 T 31-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 DY252_05425 f12d18565b1804c0c2c725249834329a 711 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 20 671 0.0 T 31-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 DY252_05425 f12d18565b1804c0c2c725249834329a 711 Gene3D G3DSA:3.40.50.300 14 253 9.5E-78 T 31-10-2018 DY252_05425 f12d18565b1804c0c2c725249834329a 711 Gene3D G3DSA:4.10.860.10 623 678 2.7E-11 T 31-10-2018 DY252_21230 95bccd04ddc01df5d915d75022c803c5 1166 SUPERFAMILY SSF52540 287 469 1.77E-31 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_21230 95bccd04ddc01df5d915d75022c803c5 1166 Gene3D G3DSA:3.40.50.300 278 483 1.8E-43 T 31-10-2018 DY252_21230 95bccd04ddc01df5d915d75022c803c5 1166 Pfam PF00270 DEAD/DEAH box helicase 297 456 2.3E-19 T 31-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DY252_21230 95bccd04ddc01df5d915d75022c803c5 1166 SMART SM00487 288 494 7.5E-26 T 31-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DY252_21230 95bccd04ddc01df5d915d75022c803c5 1166 SUPERFAMILY SSF52540 308 704 5.73E-19 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_21230 95bccd04ddc01df5d915d75022c803c5 1166 Gene3D G3DSA:3.40.50.300 521 702 4.4E-20 T 31-10-2018 DY252_13955 25b5d8560cf88508f9aeb7c8c57e0c47 233 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 6 36 8.1E-13 T 31-10-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 DY252_13955 25b5d8560cf88508f9aeb7c8c57e0c47 233 Gene3D G3DSA:2.60.130.10 1 233 4.5E-83 T 31-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 DY252_13955 25b5d8560cf88508f9aeb7c8c57e0c47 233 SUPERFAMILY SSF49482 5 232 2.35E-72 T 31-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 DY252_13955 25b5d8560cf88508f9aeb7c8c57e0c47 233 Pfam PF00775 Dioxygenase 44 225 2.9E-56 T 31-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 DY252_13955 25b5d8560cf88508f9aeb7c8c57e0c47 233 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 12 233 6.9E-102 T 31-10-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 DY252_03850 acfea212cf5d6064082925fbf1f19878 476 Gene3D G3DSA:3.40.50.720 146 257 1.3E-20 T 31-10-2018 DY252_03850 acfea212cf5d6064082925fbf1f19878 476 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 135 2.9E-35 T 31-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 DY252_03850 acfea212cf5d6064082925fbf1f19878 476 Gene3D G3DSA:3.50.50.60 258 400 1.5E-46 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_03850 acfea212cf5d6064082925fbf1f19878 476 Gene3D G3DSA:1.10.1060.10 5 145 2.2E-31 T 31-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DY252_03850 acfea212cf5d6064082925fbf1f19878 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 149 457 3.1E-33 T 31-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DY252_03850 acfea212cf5d6064082925fbf1f19878 476 SUPERFAMILY SSF46548 4 157 2.88E-34 T 31-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DY252_03850 acfea212cf5d6064082925fbf1f19878 476 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 8 468 1.6E-156 T 31-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 DY252_03850 acfea212cf5d6064082925fbf1f19878 476 PRINTS PR00419 Adrenodoxin reductase family signature 326 339 1.8E-29 T 31-10-2018 DY252_03850 acfea212cf5d6064082925fbf1f19878 476 PRINTS PR00419 Adrenodoxin reductase family signature 149 171 1.8E-29 T 31-10-2018 DY252_03850 acfea212cf5d6064082925fbf1f19878 476 PRINTS PR00419 Adrenodoxin reductase family signature 172 185 1.8E-29 T 31-10-2018 DY252_03850 acfea212cf5d6064082925fbf1f19878 476 PRINTS PR00419 Adrenodoxin reductase family signature 292 306 1.8E-29 T 31-10-2018 DY252_03850 acfea212cf5d6064082925fbf1f19878 476 PRINTS PR00419 Adrenodoxin reductase family signature 214 224 1.8E-29 T 31-10-2018 DY252_03850 acfea212cf5d6064082925fbf1f19878 476 SUPERFAMILY SSF51971 147 401 8.83E-69 T 31-10-2018 DY252_03155 419c5a862d853215ad2e695c895bd070 801 Gene3D G3DSA:3.30.365.10 11 798 3.9E-278 T 31-10-2018 DY252_03155 419c5a862d853215ad2e695c895bd070 801 SUPERFAMILY SSF54665 23 147 5.89E-41 T 31-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily DY252_03155 419c5a862d853215ad2e695c895bd070 801 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 39 146 4.1E-26 T 31-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DY252_03155 419c5a862d853215ad2e695c895bd070 801 SUPERFAMILY SSF56003 146 780 2.22E-206 T 31-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 DY252_03155 419c5a862d853215ad2e695c895bd070 801 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 25 780 0.0 T 31-10-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 DY252_03155 419c5a862d853215ad2e695c895bd070 801 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 163 710 7.3E-203 T 31-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DY252_03155 419c5a862d853215ad2e695c895bd070 801 SMART SM01008 38 146 1.6E-45 T 31-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DY252_08850 f39d48bee052f01d516d07c4c3c36432 294 SUPERFAMILY SSF51621 4 289 4.49E-92 T 31-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DY252_08850 f39d48bee052f01d516d07c4c3c36432 294 Gene3D G3DSA:3.20.20.60 1 292 3.5E-104 T 31-10-2018 DY252_08850 f39d48bee052f01d516d07c4c3c36432 294 Pfam PF13714 Phosphoenolpyruvate phosphomutase 11 253 2.8E-52 T 31-10-2018 DY252_21890 6a53976f46f18fa6cd93122c0a2cd293 571 SUPERFAMILY SSF47384 344 414 1.61E-10 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_21890 6a53976f46f18fa6cd93122c0a2cd293 571 SMART SM00388 347 415 5.9E-9 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_21890 6a53976f46f18fa6cd93122c0a2cd293 571 SUPERFAMILY SSF103190 63 172 1.23E-15 T 31-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DY252_21890 6a53976f46f18fa6cd93122c0a2cd293 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 510 1.4E-14 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_21890 6a53976f46f18fa6cd93122c0a2cd293 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 524 1.4E-14 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_21890 6a53976f46f18fa6cd93122c0a2cd293 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 545 1.4E-14 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_21890 6a53976f46f18fa6cd93122c0a2cd293 571 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 564 1.4E-14 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_21890 6a53976f46f18fa6cd93122c0a2cd293 571 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 458 565 4.9E-19 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_21890 6a53976f46f18fa6cd93122c0a2cd293 571 Gene3D G3DSA:3.30.450.20 42 160 3.5E-66 T 31-10-2018 DY252_21890 6a53976f46f18fa6cd93122c0a2cd293 571 SUPERFAMILY SSF55874 406 565 3.27E-38 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_21890 6a53976f46f18fa6cd93122c0a2cd293 571 PIRSF PIRSF036431 1 571 6.2E-181 T 31-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) DY252_21890 6a53976f46f18fa6cd93122c0a2cd293 571 Pfam PF02743 Cache domain 19 258 6.6E-12 T 31-10-2018 IPR033479 Double Cache domain 1 DY252_21890 6a53976f46f18fa6cd93122c0a2cd293 571 Gene3D G3DSA:3.30.450.20 30 258 3.5E-66 T 31-10-2018 DY252_21890 6a53976f46f18fa6cd93122c0a2cd293 571 Gene3D G3DSA:3.30.565.10 417 568 2.9E-39 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_21890 6a53976f46f18fa6cd93122c0a2cd293 571 Gene3D G3DSA:1.10.287.130 324 410 6.8E-21 T 31-10-2018 DY252_21890 6a53976f46f18fa6cd93122c0a2cd293 571 SMART SM00387 457 567 1.7E-27 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_21890 6a53976f46f18fa6cd93122c0a2cd293 571 Pfam PF00512 His Kinase A (phospho-acceptor) domain 347 414 1.4E-10 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_18550 e3e8cb02a0d791d9e6f06425fe52b6eb 874 SMART SM01079 60 227 9.6E-9 T 31-10-2018 IPR006189 CHASE domain DY252_18550 e3e8cb02a0d791d9e6f06425fe52b6eb 874 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 426 586 4.2E-43 T 31-10-2018 IPR000160 GGDEF domain DY252_18550 e3e8cb02a0d791d9e6f06425fe52b6eb 874 Gene3D G3DSA:3.30.70.270 421 596 7.9E-54 T 31-10-2018 DY252_18550 e3e8cb02a0d791d9e6f06425fe52b6eb 874 Gene3D G3DSA:3.20.20.450 601 866 3.9E-75 T 31-10-2018 IPR035919 EAL domain superfamily DY252_18550 e3e8cb02a0d791d9e6f06425fe52b6eb 874 SUPERFAMILY SSF141868 605 854 4.18E-65 T 31-10-2018 IPR035919 EAL domain superfamily DY252_18550 e3e8cb02a0d791d9e6f06425fe52b6eb 874 SUPERFAMILY SSF55073 433 590 4.08E-43 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_18550 e3e8cb02a0d791d9e6f06425fe52b6eb 874 SMART SM00052 600 846 1.2E-73 T 31-10-2018 IPR001633 EAL domain DY252_18550 e3e8cb02a0d791d9e6f06425fe52b6eb 874 Pfam PF00563 EAL domain 606 841 9.4E-57 T 31-10-2018 IPR001633 EAL domain DY252_18550 e3e8cb02a0d791d9e6f06425fe52b6eb 874 Pfam PF00990 Diguanylate cyclase, GGDEF domain 428 583 5.0E-43 T 31-10-2018 IPR000160 GGDEF domain DY252_18550 e3e8cb02a0d791d9e6f06425fe52b6eb 874 SMART SM00267 417 590 2.7E-56 T 31-10-2018 IPR000160 GGDEF domain DY252_18550 e3e8cb02a0d791d9e6f06425fe52b6eb 874 Pfam PF03924 CHASE domain 120 219 8.4E-11 T 31-10-2018 IPR006189 CHASE domain DY252_09990 d57cd8e4d536fd5deeae0953285aa5bd 256 Gene3D G3DSA:3.40.190.80 134 254 9.5E-32 T 31-10-2018 DY252_09990 d57cd8e4d536fd5deeae0953285aa5bd 256 PRINTS PR01959 SuhB family inositol monophosphatase signature 191 203 2.2E-18 T 31-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DY252_09990 d57cd8e4d536fd5deeae0953285aa5bd 256 PRINTS PR01959 SuhB family inositol monophosphatase signature 10 32 2.2E-18 T 31-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DY252_09990 d57cd8e4d536fd5deeae0953285aa5bd 256 PRINTS PR01959 SuhB family inositol monophosphatase signature 149 175 2.2E-18 T 31-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DY252_09990 d57cd8e4d536fd5deeae0953285aa5bd 256 PRINTS PR01959 SuhB family inositol monophosphatase signature 97 116 2.2E-18 T 31-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DY252_09990 d57cd8e4d536fd5deeae0953285aa5bd 256 Pfam PF00459 Inositol monophosphatase family 5 253 1.4E-56 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_09990 d57cd8e4d536fd5deeae0953285aa5bd 256 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 204 218 - T 31-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 DY252_09990 d57cd8e4d536fd5deeae0953285aa5bd 256 Gene3D G3DSA:3.30.540.10 1 133 8.6E-47 T 31-10-2018 DY252_09990 d57cd8e4d536fd5deeae0953285aa5bd 256 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 74 87 - T 31-10-2018 IPR020583 Inositol monophosphatase, metal-binding site DY252_09990 d57cd8e4d536fd5deeae0953285aa5bd 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 123 146 2.2E-54 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_09990 d57cd8e4d536fd5deeae0953285aa5bd 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 53 69 2.2E-54 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_09990 d57cd8e4d536fd5deeae0953285aa5bd 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 74 90 2.2E-54 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_09990 d57cd8e4d536fd5deeae0953285aa5bd 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 170 191 2.2E-54 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_09990 d57cd8e4d536fd5deeae0953285aa5bd 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 31 51 2.2E-54 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_09990 d57cd8e4d536fd5deeae0953285aa5bd 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 201 225 2.2E-54 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_09990 d57cd8e4d536fd5deeae0953285aa5bd 256 SUPERFAMILY SSF56655 2 253 4.06E-77 T 31-10-2018 DY252_12070 765ec185b696da4e79d8a4aa3d9bc4b2 450 Gene3D G3DSA:1.20.1600.10 25 430 4.6E-106 T 31-10-2018 DY252_12070 765ec185b696da4e79d8a4aa3d9bc4b2 450 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 24 432 6.3E-110 T 31-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 DY252_12070 765ec185b696da4e79d8a4aa3d9bc4b2 450 Pfam PF02321 Outer membrane efflux protein 27 216 6.4E-41 T 31-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DY252_12070 765ec185b696da4e79d8a4aa3d9bc4b2 450 Pfam PF02321 Outer membrane efflux protein 236 419 6.3E-31 T 31-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DY252_12070 765ec185b696da4e79d8a4aa3d9bc4b2 450 SUPERFAMILY SSF56954 3 421 2.49E-95 T 31-10-2018 DY252_12070 765ec185b696da4e79d8a4aa3d9bc4b2 450 PIRSF PIRSF001892 8 139 7.9E-19 T 31-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 DY252_12070 765ec185b696da4e79d8a4aa3d9bc4b2 450 PIRSF PIRSF001892 107 427 1.9E-42 T 31-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 291 413 7.1E-17 T 31-10-2018 IPR000014 PAS domain DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 SUPERFAMILY SSF54631 145 271 6.95E-21 T 31-10-2018 DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 SUPERFAMILY SSF55785 302 405 5.93E-27 T 31-10-2018 IPR035965 PAS domain superfamily DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 SMART SM00091 294 360 5.1E-5 T 31-10-2018 IPR000014 PAS domain DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 Pfam PF13426 PAS domain 304 406 2.0E-15 T 31-10-2018 IPR000014 PAS domain DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 Gene3D G3DSA:3.20.20.450 593 847 1.7E-99 T 31-10-2018 IPR035919 EAL domain superfamily DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 SMART SM00267 408 581 2.2E-50 T 31-10-2018 IPR000160 GGDEF domain DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 Gene3D G3DSA:3.30.70.270 416 587 6.1E-52 T 31-10-2018 DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 Gene3D G3DSA:3.30.450.20 284 415 3.9E-33 T 31-10-2018 DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 Pfam PF00563 EAL domain 597 833 5.5E-77 T 31-10-2018 IPR001633 EAL domain DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 SMART SM00086 366 408 5.3E-4 T 31-10-2018 IPR001610 PAC motif DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 SUPERFAMILY SSF54631 14 134 1.16E-23 T 31-10-2018 DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 SMART SM00116 220 268 0.046 T 31-10-2018 IPR000644 CBS domain DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 SMART SM00116 23 70 4.2E-5 T 31-10-2018 IPR000644 CBS domain DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 SMART SM00116 87 135 4.2E-5 T 31-10-2018 IPR000644 CBS domain DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 418 578 1.9E-41 T 31-10-2018 IPR000160 GGDEF domain DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 SUPERFAMILY SSF55073 424 581 3.22E-44 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 Pfam PF00571 CBS domain 84 134 4.8E-8 T 31-10-2018 IPR000644 CBS domain DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 Pfam PF00571 CBS domain 24 67 1.1E-7 T 31-10-2018 IPR000644 CBS domain DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 Pfam PF00571 CBS domain 213 267 6.3E-9 T 31-10-2018 IPR000644 CBS domain DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 Pfam PF00990 Diguanylate cyclase, GGDEF domain 419 577 1.5E-41 T 31-10-2018 IPR000160 GGDEF domain DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 Gene3D G3DSA:3.10.580.10 140 276 3.1E-22 T 31-10-2018 DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 Gene3D G3DSA:3.10.580.10 13 138 1.4E-26 T 31-10-2018 DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 SUPERFAMILY SSF141868 597 844 6.8E-89 T 31-10-2018 IPR035919 EAL domain superfamily DY252_04500 ef33362f84e80ce53c0adde8bbc76c73 848 SMART SM00052 591 838 3.2E-111 T 31-10-2018 IPR001633 EAL domain DY252_18825 3d72bfcc4e81831fb5769dfd8878864f 343 SUPERFAMILY SSF47413 4 63 1.22E-17 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_18825 3d72bfcc4e81831fb5769dfd8878864f 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 4.7E-5 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_18825 3d72bfcc4e81831fb5769dfd8878864f 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 4.7E-5 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_18825 3d72bfcc4e81831fb5769dfd8878864f 343 Pfam PF13377 Periplasmic binding protein-like domain 172 338 4.2E-42 T 31-10-2018 DY252_18825 3d72bfcc4e81831fb5769dfd8878864f 343 SUPERFAMILY SSF53822 65 340 1.85E-81 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_18825 3d72bfcc4e81831fb5769dfd8878864f 343 Gene3D G3DSA:3.40.50.2300 164 294 2.3E-85 T 31-10-2018 DY252_18825 3d72bfcc4e81831fb5769dfd8878864f 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 3.2E-16 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_18825 3d72bfcc4e81831fb5769dfd8878864f 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 31-10-2018 DY252_18825 3d72bfcc4e81831fb5769dfd8878864f 343 SMART SM00354 5 75 1.6E-26 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_18825 3d72bfcc4e81831fb5769dfd8878864f 343 Gene3D G3DSA:1.10.260.40 1 59 7.9E-23 T 31-10-2018 DY252_18825 3d72bfcc4e81831fb5769dfd8878864f 343 Gene3D G3DSA:3.40.50.2300 60 311 2.3E-85 T 31-10-2018 DY252_05845 02ef328cfae15a051d870d79d2eccecb 350 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 31-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DY252_05845 02ef328cfae15a051d870d79d2eccecb 350 Pfam PF00107 Zinc-binding dehydrogenase 180 305 2.7E-17 T 31-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DY252_05845 02ef328cfae15a051d870d79d2eccecb 350 SUPERFAMILY SSF50129 3 178 5.97E-47 T 31-10-2018 IPR011032 GroES-like superfamily DY252_05845 02ef328cfae15a051d870d79d2eccecb 350 Gene3D G3DSA:3.90.180.10 21 333 4.3E-96 T 31-10-2018 DY252_05845 02ef328cfae15a051d870d79d2eccecb 350 Gene3D G3DSA:3.40.50.720 157 294 4.3E-96 T 31-10-2018 DY252_05845 02ef328cfae15a051d870d79d2eccecb 350 SMART SM00829 12 337 9.4E-6 T 31-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DY252_05845 02ef328cfae15a051d870d79d2eccecb 350 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 139 1.5E-22 T 31-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DY252_05845 02ef328cfae15a051d870d79d2eccecb 350 SUPERFAMILY SSF51735 143 313 3.54E-35 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_16635 af6236e07ef6e2fbded3ec8aff46fdc8 486 Pfam PF12236 Bacteriophage head to tail connecting protein 7 476 1.3E-137 T 31-10-2018 IPR020991 Head-to-tail connector protein, podovirus-type DY252_15125 7c2708e62fe0c17f6c77c43a777c9814 555 SMART SM00283 295 549 2.6E-41 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_15125 7c2708e62fe0c17f6c77c43a777c9814 555 Gene3D G3DSA:1.20.1480.50 168 259 2.1E-16 T 31-10-2018 DY252_15125 7c2708e62fe0c17f6c77c43a777c9814 555 SUPERFAMILY SSF58104 235 548 3.01E-60 T 31-10-2018 DY252_15125 7c2708e62fe0c17f6c77c43a777c9814 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 420 8.2E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_15125 7c2708e62fe0c17f6c77c43a777c9814 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 17 42 8.2E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_15125 7c2708e62fe0c17f6c77c43a777c9814 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 470 499 8.2E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_15125 7c2708e62fe0c17f6c77c43a777c9814 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 422 451 8.2E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_15125 7c2708e62fe0c17f6c77c43a777c9814 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 315 344 8.2E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_15125 7c2708e62fe0c17f6c77c43a777c9814 555 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 358 517 2.2E-29 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_15125 7c2708e62fe0c17f6c77c43a777c9814 555 Pfam PF00672 HAMP domain 208 251 7.7E-7 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_15125 7c2708e62fe0c17f6c77c43a777c9814 555 Gene3D G3DSA:1.10.287.950 260 550 7.4E-53 T 31-10-2018 DY252_15125 7c2708e62fe0c17f6c77c43a777c9814 555 SMART SM00304 206 259 9.3E-7 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_15125 7c2708e62fe0c17f6c77c43a777c9814 555 SMART SM01358 39 355 1.7E-9 T 31-10-2018 IPR032255 Helical bimodular sensor domain DY252_13805 ede3c2ae331456c9ec0f077842ffb961 458 Pfam PF00202 Aminotransferase class-III 27 444 1.2E-107 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_13805 ede3c2ae331456c9ec0f077842ffb961 458 SUPERFAMILY SSF53383 9 447 4.82E-122 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_13805 ede3c2ae331456c9ec0f077842ffb961 458 PIRSF PIRSF000521 26 393 1.0E-37 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_13805 ede3c2ae331456c9ec0f077842ffb961 458 Gene3D G3DSA:3.40.640.10 60 336 1.4E-144 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_13805 ede3c2ae331456c9ec0f077842ffb961 458 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 248 285 - T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_13805 ede3c2ae331456c9ec0f077842ffb961 458 Gene3D G3DSA:3.90.1150.10 27 444 1.4E-144 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_08640 407adb3b6f50c73baf4b25edff059667 375 Pfam PF09375 Imelysin 52 342 1.1E-39 T 31-10-2018 IPR018976 Imelysin-like domain DY252_08640 407adb3b6f50c73baf4b25edff059667 375 Gene3D G3DSA:1.20.1420.20 27 375 6.5E-63 T 31-10-2018 IPR038352 Imelysin-like domain superfamily DY252_18085 bd4d88c463a3a8e78af18293b28cb54f 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 325 1.0E-26 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_18085 bd4d88c463a3a8e78af18293b28cb54f 331 SUPERFAMILY SSF52540 19 262 3.51E-72 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18085 bd4d88c463a3a8e78af18293b28cb54f 331 Gene3D G3DSA:3.40.50.300 12 331 9.0E-96 T 31-10-2018 DY252_18085 bd4d88c463a3a8e78af18293b28cb54f 331 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_18085 bd4d88c463a3a8e78af18293b28cb54f 331 SMART SM00382 47 240 4.4E-14 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_18085 bd4d88c463a3a8e78af18293b28cb54f 331 Pfam PF00005 ABC transporter 38 190 1.5E-29 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_18085 bd4d88c463a3a8e78af18293b28cb54f 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 307 1.3E-21 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_11600 3cd31759b63afac8b4434b01a8147773 55 SUPERFAMILY SSF57829 2 53 5.43E-18 T 31-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DY252_11600 3cd31759b63afac8b4434b01a8147773 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 31-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_11600 3cd31759b63afac8b4434b01a8147773 55 Gene3D G3DSA:2.20.28.120 1 55 1.7E-26 T 31-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_11600 3cd31759b63afac8b4434b01a8147773 55 Pfam PF00471 Ribosomal protein L33 8 53 4.1E-16 T 31-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_11600 3cd31759b63afac8b4434b01a8147773 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 53 13.179 T 31-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_11600 3cd31759b63afac8b4434b01a8147773 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 4.2E-22 T 31-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 SMART SM00316 621 691 7.6E-21 T 31-10-2018 IPR022967 RNA-binding domain, S1 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 694 30.173 T 31-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 SUPERFAMILY SSF55666 451 549 1.68E-27 T 31-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 SUPERFAMILY SSF50249 621 697 6.47E-20 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 Gene3D G3DSA:3.30.230.70 1 230 1.4E-83 T 31-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 SUPERFAMILY SSF55666 145 234 2.23E-28 T 31-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 1.6E-15 T 31-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 SUPERFAMILY SSF46915 242 321 2.43E-16 T 31-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 PIRSF PIRSF005499 1 706 8.8E-288 T 31-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 Gene3D G3DSA:3.30.230.70 235 550 1.3E-112 T 31-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 Gene3D G3DSA:2.40.50.140 623 695 1.5E-29 T 31-10-2018 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 692 0.0 T 31-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 SUPERFAMILY SSF54211 2 144 1.06E-50 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 9.4E-23 T 31-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 4.5E-20 T 31-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 Pfam PF00575 S1 RNA binding domain 619 691 1.6E-15 T 31-10-2018 IPR003029 S1 domain GO:0003676 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 8.1E-13 T 31-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 Pfam PF03725 3' exoribonuclease family, domain 2 461 529 1.1E-4 T 31-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 SUPERFAMILY SSF54791 556 641 1.02E-20 T 31-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 SUPERFAMILY SSF54211 295 489 1.37E-46 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 Gene3D G3DSA:3.30.1370.10 551 622 6.1E-19 T 31-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 SMART SM00322 553 618 8.4E-12 T 31-10-2018 IPR004087 K Homology domain GO:0003676 DY252_01045 42d8ef0d1d7c930e2758d6345b32e9a5 707 Pfam PF00013 KH domain 557 593 8.3E-10 T 31-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 DY252_03140 b2bb8a018d8673ee480b4054987dd98a 304 SUPERFAMILY SSF88713 6 302 2.6E-98 T 31-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DY252_03140 b2bb8a018d8673ee480b4054987dd98a 304 Pfam PF01522 Polysaccharide deacetylase 77 183 3.5E-14 T 31-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DY252_03140 b2bb8a018d8673ee480b4054987dd98a 304 Gene3D G3DSA:3.20.20.370 1 303 2.0E-106 T 31-10-2018 DY252_03140 b2bb8a018d8673ee480b4054987dd98a 304 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 6 301 3.9E-162 T 31-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 DY252_20685 1856eea4e9fb91517081e5a48b3a6f08 361 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 311 319 - T 31-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DY252_20685 1856eea4e9fb91517081e5a48b3a6f08 361 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 284 353 2.0E-10 T 31-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DY252_20685 1856eea4e9fb91517081e5a48b3a6f08 361 PRINTS PR00410 Phenol hydroxylase reductase family signature 127 146 6.2E-8 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_20685 1856eea4e9fb91517081e5a48b3a6f08 361 PRINTS PR00410 Phenol hydroxylase reductase family signature 49 61 6.2E-8 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_20685 1856eea4e9fb91517081e5a48b3a6f08 361 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 120 6.2E-8 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_20685 1856eea4e9fb91517081e5a48b3a6f08 361 PRINTS PR00410 Phenol hydroxylase reductase family signature 220 228 6.2E-8 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_20685 1856eea4e9fb91517081e5a48b3a6f08 361 SUPERFAMILY SSF54292 269 361 2.49E-26 T 31-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DY252_20685 1856eea4e9fb91517081e5a48b3a6f08 361 Pfam PF00175 Oxidoreductase NAD-binding domain 128 234 3.2E-16 T 31-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DY252_20685 1856eea4e9fb91517081e5a48b3a6f08 361 SUPERFAMILY SSF63380 22 116 5.79E-25 T 31-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DY252_20685 1856eea4e9fb91517081e5a48b3a6f08 361 Gene3D G3DSA:3.40.50.80 121 254 3.7E-31 T 31-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DY252_20685 1856eea4e9fb91517081e5a48b3a6f08 361 Pfam PF00970 Oxidoreductase FAD-binding domain 27 116 2.0E-13 T 31-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DY252_20685 1856eea4e9fb91517081e5a48b3a6f08 361 Gene3D G3DSA:2.40.30.10 19 117 7.7E-25 T 31-10-2018 DY252_20685 1856eea4e9fb91517081e5a48b3a6f08 361 Gene3D G3DSA:3.10.20.30 258 361 1.3E-24 T 31-10-2018 IPR012675 Beta-grasp domain superfamily DY252_20685 1856eea4e9fb91517081e5a48b3a6f08 361 SUPERFAMILY SSF52343 107 250 1.31E-36 T 31-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DY252_12645 bd2dfcc2712be9819ac3e6c22651777a 431 SUPERFAMILY SSF81296 303 420 1.54E-29 T 31-10-2018 IPR014756 Immunoglobulin E-set DY252_12645 bd2dfcc2712be9819ac3e6c22651777a 431 SUPERFAMILY SSF56524 67 307 1.03E-78 T 31-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DY252_12645 bd2dfcc2712be9819ac3e6c22651777a 431 PRINTS PR00407 Eukaryotic molybdopterin domain signature 228 244 3.5E-17 T 31-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DY252_12645 bd2dfcc2712be9819ac3e6c22651777a 431 PRINTS PR00407 Eukaryotic molybdopterin domain signature 340 352 3.5E-17 T 31-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DY252_12645 bd2dfcc2712be9819ac3e6c22651777a 431 PRINTS PR00407 Eukaryotic molybdopterin domain signature 157 168 3.5E-17 T 31-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DY252_12645 bd2dfcc2712be9819ac3e6c22651777a 431 PRINTS PR00407 Eukaryotic molybdopterin domain signature 245 258 3.5E-17 T 31-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DY252_12645 bd2dfcc2712be9819ac3e6c22651777a 431 PRINTS PR00407 Eukaryotic molybdopterin domain signature 105 121 3.5E-17 T 31-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DY252_12645 bd2dfcc2712be9819ac3e6c22651777a 431 PRINTS PR00407 Eukaryotic molybdopterin domain signature 261 274 3.5E-17 T 31-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DY252_12645 bd2dfcc2712be9819ac3e6c22651777a 431 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 298 415 4.9E-17 T 31-10-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 DY252_12645 bd2dfcc2712be9819ac3e6c22651777a 431 Gene3D G3DSA:2.60.40.650 302 431 2.2E-44 T 31-10-2018 DY252_12645 bd2dfcc2712be9819ac3e6c22651777a 431 TIGRFAM TIGR04555 sulfite_DH_soxC: sulfite dehydrogenase 15 428 7.3E-193 T 31-10-2018 IPR030835 Sulfite dehydrogenase SoxC DY252_12645 bd2dfcc2712be9819ac3e6c22651777a 431 Pfam PF00174 Oxidoreductase molybdopterin binding domain 117 277 4.5E-53 T 31-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 DY252_12645 bd2dfcc2712be9819ac3e6c22651777a 431 Gene3D G3DSA:3.90.420.10 43 301 2.8E-99 T 31-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DY252_10125 dae4120916b467a48c125e15bd3bb78a 262 SUPERFAMILY SSF52172 19 147 5.41E-28 T 31-10-2018 IPR011006 CheY-like superfamily DY252_10125 dae4120916b467a48c125e15bd3bb78a 262 Pfam PF00486 Transcriptional regulatory protein, C terminal 173 249 6.9E-12 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_10125 dae4120916b467a48c125e15bd3bb78a 262 SMART SM00448 24 134 4.1E-23 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_10125 dae4120916b467a48c125e15bd3bb78a 262 Gene3D G3DSA:3.40.50.2300 20 149 1.1E-25 T 31-10-2018 DY252_10125 dae4120916b467a48c125e15bd3bb78a 262 Pfam PF00072 Response regulator receiver domain 26 134 2.9E-17 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_10125 dae4120916b467a48c125e15bd3bb78a 262 SMART SM00862 173 249 3.7E-9 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_10125 dae4120916b467a48c125e15bd3bb78a 262 SUPERFAMILY SSF46894 154 250 1.33E-13 T 31-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DY252_10125 dae4120916b467a48c125e15bd3bb78a 262 Gene3D G3DSA:1.10.10.10 150 253 2.2E-14 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_10810 f651b324a24c505028d81a67b5b34705 387 SUPERFAMILY SSF51395 5 376 1.95E-98 T 31-10-2018 DY252_10810 f651b324a24c505028d81a67b5b34705 387 PIRSF PIRSF000138 1 380 8.2E-119 T 31-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 DY252_10810 f651b324a24c505028d81a67b5b34705 387 Pfam PF01070 FMN-dependent dehydrogenase 15 376 7.9E-125 T 31-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 DY252_10810 f651b324a24c505028d81a67b5b34705 387 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 274 280 - T 31-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 DY252_10810 f651b324a24c505028d81a67b5b34705 387 Gene3D G3DSA:3.20.20.70 3 384 5.5E-124 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_18970 8fd1cb26ac975fec7db7910e2fe6cf16 456 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 18 448 8.3E-217 T 31-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 DY252_18970 8fd1cb26ac975fec7db7910e2fe6cf16 456 SUPERFAMILY SSF51182 18 450 3.56E-167 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_18970 8fd1cb26ac975fec7db7910e2fe6cf16 456 Hamap MF_00334 Homogentisate 1,2-dioxygenase [hmgA]. 20 450 70.933 T 31-10-2018 IPR022950 Homogentisate 1,2-dioxygenase, bacterial GO:0004411|GO:0006559|GO:0006572|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5 DY252_18970 8fd1cb26ac975fec7db7910e2fe6cf16 456 Pfam PF04209 homogentisate 1,2-dioxygenase 20 448 3.1E-215 T 31-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 DY252_18970 8fd1cb26ac975fec7db7910e2fe6cf16 456 Gene3D G3DSA:2.60.120.10 283 419 1.1E-62 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_06395 aa0ddbca768d03f0899d6f2626198505 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.0E-9 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_06395 aa0ddbca768d03f0899d6f2626198505 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.0E-9 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_06395 aa0ddbca768d03f0899d6f2626198505 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.0E-9 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_06395 aa0ddbca768d03f0899d6f2626198505 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.2E-24 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_06395 aa0ddbca768d03f0899d6f2626198505 302 SUPERFAMILY SSF53850 88 296 9.37E-38 T 31-10-2018 DY252_06395 aa0ddbca768d03f0899d6f2626198505 302 SUPERFAMILY SSF46785 1 106 3.12E-27 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_06395 aa0ddbca768d03f0899d6f2626198505 302 Gene3D G3DSA:1.10.10.10 1 89 1.5E-27 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_06395 aa0ddbca768d03f0899d6f2626198505 302 Gene3D G3DSA:3.40.190.290 90 296 7.4E-38 T 31-10-2018 DY252_06395 aa0ddbca768d03f0899d6f2626198505 302 Pfam PF03466 LysR substrate binding domain 87 292 1.2E-35 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_06250 7faaa6633c911730ade9c704552e7cf0 283 Pfam PF09347 Domain of unknown function (DUF1989) 52 232 9.4E-56 T 31-10-2018 IPR018959 Protein of unknown function DUF1989 DY252_10440 05c4c6e2ca66d97390392d8899a131b3 329 Gene3D G3DSA:3.40.190.10 41 294 5.7E-55 T 31-10-2018 DY252_10440 05c4c6e2ca66d97390392d8899a131b3 329 Pfam PF13343 Bacterial extracellular solute-binding protein 68 309 7.7E-47 T 31-10-2018 DY252_10440 05c4c6e2ca66d97390392d8899a131b3 329 Gene3D G3DSA:3.40.190.10 121 240 5.7E-55 T 31-10-2018 DY252_10440 05c4c6e2ca66d97390392d8899a131b3 329 SUPERFAMILY SSF53850 21 317 7.41E-62 T 31-10-2018 DY252_18670 bd89cbf99290633feff3689d8e5d07e0 1063 Gene3D G3DSA:3.40.50.300 699 905 7.1E-20 T 31-10-2018 DY252_18670 bd89cbf99290633feff3689d8e5d07e0 1063 Pfam PF00027 Cyclic nucleotide-binding domain 946 1033 2.2E-20 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_18670 bd89cbf99290633feff3689d8e5d07e0 1063 SMART SM00382 372 923 0.0088 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_18670 bd89cbf99290633feff3689d8e5d07e0 1063 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 995 1012 - T 31-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site DY252_18670 bd89cbf99290633feff3689d8e5d07e0 1063 PRINTS PR00103 cAMP-dependent protein kinase signature 993 1002 1.4E-5 T 31-10-2018 DY252_18670 bd89cbf99290633feff3689d8e5d07e0 1063 PRINTS PR00103 cAMP-dependent protein kinase signature 1005 1016 1.4E-5 T 31-10-2018 DY252_18670 bd89cbf99290633feff3689d8e5d07e0 1063 PRINTS PR00103 cAMP-dependent protein kinase signature 948 962 1.4E-5 T 31-10-2018 DY252_18670 bd89cbf99290633feff3689d8e5d07e0 1063 Pfam PF00005 ABC transporter 364 462 2.3E-6 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_18670 bd89cbf99290633feff3689d8e5d07e0 1063 SUPERFAMILY SSF51206 921 1056 1.83E-30 T 31-10-2018 IPR018490 Cyclic nucleotide-binding-like DY252_18670 bd89cbf99290633feff3689d8e5d07e0 1063 SUPERFAMILY SSF52540 346 890 4.31E-30 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18670 bd89cbf99290633feff3689d8e5d07e0 1063 Pfam PF00664 ABC transporter transmembrane region 68 290 3.7E-24 T 31-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DY252_18670 bd89cbf99290633feff3689d8e5d07e0 1063 Gene3D G3DSA:2.60.120.10 917 1060 1.0E-34 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_18670 bd89cbf99290633feff3689d8e5d07e0 1063 SUPERFAMILY SSF90123 5 328 3.53E-46 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_18670 bd89cbf99290633feff3689d8e5d07e0 1063 Gene3D G3DSA:1.20.1560.10 3 325 3.8E-40 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_18670 bd89cbf99290633feff3689d8e5d07e0 1063 SMART SM00100 927 1045 5.1E-16 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_18670 bd89cbf99290633feff3689d8e5d07e0 1063 Gene3D G3DSA:3.40.50.300 346 473 1.6E-15 T 31-10-2018 DY252_14795 efe0c0f65fac78f180171733ad8aa045 417 Gene3D G3DSA:1.10.240.10 229 331 9.7E-30 T 31-10-2018 DY252_14795 efe0c0f65fac78f180171733ad8aa045 417 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 7 415 1.4E-113 T 31-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DY252_14795 efe0c0f65fac78f180171733ad8aa045 417 Pfam PF00579 tRNA synthetases class I (W and Y) 34 328 1.9E-75 T 31-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_14795 efe0c0f65fac78f180171733ad8aa045 417 Gene3D G3DSA:3.40.50.620 1 228 2.2E-89 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_14795 efe0c0f65fac78f180171733ad8aa045 417 SUPERFAMILY SSF55174 314 415 4.71E-16 T 31-10-2018 DY252_14795 efe0c0f65fac78f180171733ad8aa045 417 SUPERFAMILY SSF52374 7 327 1.21E-97 T 31-10-2018 DY252_14795 efe0c0f65fac78f180171733ad8aa045 417 Gene3D G3DSA:3.10.290.10 332 404 2.7E-16 T 31-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DY252_14795 efe0c0f65fac78f180171733ad8aa045 417 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 222 234 2.2E-26 T 31-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DY252_14795 efe0c0f65fac78f180171733ad8aa045 417 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 168 183 2.2E-26 T 31-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DY252_14795 efe0c0f65fac78f180171733ad8aa045 417 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 189 211 2.2E-26 T 31-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DY252_14795 efe0c0f65fac78f180171733ad8aa045 417 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 48 70 2.2E-26 T 31-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DY252_14795 efe0c0f65fac78f180171733ad8aa045 417 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 6 416 42.291 T 31-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 DY252_16260 24e8d0d5294d3e574121e687c9a3dab9 321 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 69 87 9.9E-14 T 31-10-2018 DY252_16260 24e8d0d5294d3e574121e687c9a3dab9 321 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 292 305 9.9E-14 T 31-10-2018 DY252_16260 24e8d0d5294d3e574121e687c9a3dab9 321 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 203 218 9.9E-14 T 31-10-2018 DY252_16260 24e8d0d5294d3e574121e687c9a3dab9 321 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 100 115 9.9E-14 T 31-10-2018 DY252_16260 24e8d0d5294d3e574121e687c9a3dab9 321 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 227 245 9.9E-14 T 31-10-2018 DY252_16260 24e8d0d5294d3e574121e687c9a3dab9 321 Gene3D G3DSA:3.40.50.1980 140 314 4.4E-51 T 31-10-2018 DY252_16260 24e8d0d5294d3e574121e687c9a3dab9 321 SUPERFAMILY SSF53807 47 310 8.24E-49 T 31-10-2018 DY252_16260 24e8d0d5294d3e574121e687c9a3dab9 321 Gene3D G3DSA:3.40.50.1980 36 135 3.0E-21 T 31-10-2018 DY252_16260 24e8d0d5294d3e574121e687c9a3dab9 321 Pfam PF01497 Periplasmic binding protein 53 290 1.4E-21 T 31-10-2018 IPR002491 ABC transporter periplasmic binding domain DY252_15920 d18cb82ec5c548c960a9989e6b0f042b 380 Gene3D G3DSA:3.20.20.140 49 377 2.0E-84 T 31-10-2018 DY252_15920 d18cb82ec5c548c960a9989e6b0f042b 380 SUPERFAMILY SSF51556 93 378 1.7E-69 T 31-10-2018 IPR032466 Metal-dependent hydrolase DY252_15920 d18cb82ec5c548c960a9989e6b0f042b 380 Pfam PF04909 Amidohydrolase 94 378 1.1E-38 T 31-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DY252_00185 25603c9f7f7a162e8bd9df4147d7ab04 515 Gene3D G3DSA:3.40.190.10 11 261 1.8E-79 T 31-10-2018 DY252_00185 25603c9f7f7a162e8bd9df4147d7ab04 515 PIRSF PIRSF002741 3 515 3.8E-135 T 31-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DY252_00185 25603c9f7f7a162e8bd9df4147d7ab04 515 Gene3D G3DSA:3.10.105.10 272 483 1.2E-46 T 31-10-2018 DY252_00185 25603c9f7f7a162e8bd9df4147d7ab04 515 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 418 7.7E-90 T 31-10-2018 IPR000914 Solute-binding protein family 5 domain DY252_00185 25603c9f7f7a162e8bd9df4147d7ab04 515 SUPERFAMILY SSF53850 24 514 4.34E-132 T 31-10-2018 DY252_19305 cf6b7afe85ca6c5e1be620930688843b 564 Gene3D G3DSA:1.10.8.870 445 564 1.4E-19 T 31-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_19305 cf6b7afe85ca6c5e1be620930688843b 564 Gene3D G3DSA:3.30.9.10 92 359 3.6E-99 T 31-10-2018 DY252_19305 cf6b7afe85ca6c5e1be620930688843b 564 Gene3D G3DSA:3.50.50.60 16 407 3.6E-99 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_19305 cf6b7afe85ca6c5e1be620930688843b 564 SUPERFAMILY SSF51905 16 361 1.87E-27 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_19305 cf6b7afe85ca6c5e1be620930688843b 564 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 43 55 6.4E-17 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_19305 cf6b7afe85ca6c5e1be620930688843b 564 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 14 26 6.4E-17 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_19305 cf6b7afe85ca6c5e1be620930688843b 564 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 88 100 6.4E-17 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_19305 cf6b7afe85ca6c5e1be620930688843b 564 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 388 400 6.4E-17 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_19305 cf6b7afe85ca6c5e1be620930688843b 564 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 352 358 6.4E-17 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_19305 cf6b7afe85ca6c5e1be620930688843b 564 Pfam PF01266 FAD dependent oxidoreductase 16 381 1.1E-41 T 31-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DY252_19305 cf6b7afe85ca6c5e1be620930688843b 564 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 420 545 9.0E-19 T 31-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_01895 d6394010782f65c233127a62568b5c44 277 Pfam PF00005 ABC transporter 56 201 1.6E-34 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_01895 d6394010782f65c233127a62568b5c44 277 SUPERFAMILY SSF52540 41 272 4.85E-64 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_01895 d6394010782f65c233127a62568b5c44 277 Gene3D G3DSA:3.40.50.300 39 277 4.0E-66 T 31-10-2018 DY252_01895 d6394010782f65c233127a62568b5c44 277 SMART SM00382 65 258 2.8E-6 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_01895 d6394010782f65c233127a62568b5c44 277 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 250 272 2.1E-6 T 31-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DY252_01895 d6394010782f65c233127a62568b5c44 277 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 41 277 1.3E-114 T 31-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 DY252_09650 643e9c61eaa8e30e22f3d001922d8393 276 Gene3D G3DSA:3.40.50.720 9 276 1.2E-59 T 31-10-2018 DY252_09650 643e9c61eaa8e30e22f3d001922d8393 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 11 3.5E-6 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09650 643e9c61eaa8e30e22f3d001922d8393 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 3.5E-6 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09650 643e9c61eaa8e30e22f3d001922d8393 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 3.5E-6 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09650 643e9c61eaa8e30e22f3d001922d8393 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 3.5E-6 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09650 643e9c61eaa8e30e22f3d001922d8393 276 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 259 2.6E-87 T 31-10-2018 DY252_09650 643e9c61eaa8e30e22f3d001922d8393 276 PIRSF PIRSF000094 9 267 3.2E-111 T 31-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DY252_09650 643e9c61eaa8e30e22f3d001922d8393 276 SUPERFAMILY SSF51735 14 262 1.64E-66 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_13930 5e274d05ac8efa55d6d5a313089113eb 445 SUPERFAMILY SSF48557 10 438 1.57E-98 T 31-10-2018 IPR008948 L-Aspartase-like GO:0003824 DY252_13930 5e274d05ac8efa55d6d5a313089113eb 445 PRINTS PR00149 Fumarate lyase superfamily signature 147 165 1.7E-24 T 31-10-2018 IPR000362 Fumarate lyase family DY252_13930 5e274d05ac8efa55d6d5a313089113eb 445 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 1.7E-24 T 31-10-2018 IPR000362 Fumarate lyase family DY252_13930 5e274d05ac8efa55d6d5a313089113eb 445 PRINTS PR00149 Fumarate lyase superfamily signature 274 290 1.7E-24 T 31-10-2018 IPR000362 Fumarate lyase family DY252_13930 5e274d05ac8efa55d6d5a313089113eb 445 PRINTS PR00149 Fumarate lyase superfamily signature 102 120 1.7E-24 T 31-10-2018 IPR000362 Fumarate lyase family DY252_13930 5e274d05ac8efa55d6d5a313089113eb 445 PRINTS PR00145 Argininosuccinate lyase family signature 101 123 1.1E-10 T 31-10-2018 DY252_13930 5e274d05ac8efa55d6d5a313089113eb 445 PRINTS PR00145 Argininosuccinate lyase family signature 142 162 1.1E-10 T 31-10-2018 DY252_13930 5e274d05ac8efa55d6d5a313089113eb 445 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.1E-10 T 31-10-2018 DY252_13930 5e274d05ac8efa55d6d5a313089113eb 445 PRINTS PR00145 Argininosuccinate lyase family signature 274 290 1.1E-10 T 31-10-2018 DY252_13930 5e274d05ac8efa55d6d5a313089113eb 445 Gene3D G3DSA:1.10.40.30 361 443 1.5E-14 T 31-10-2018 DY252_13930 5e274d05ac8efa55d6d5a313089113eb 445 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 10 344 5.5E-122 T 31-10-2018 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 DY252_13930 5e274d05ac8efa55d6d5a313089113eb 445 Pfam PF00206 Lyase 28 293 2.1E-44 T 31-10-2018 IPR022761 Fumarate lyase, N-terminal DY252_13930 5e274d05ac8efa55d6d5a313089113eb 445 Gene3D G3DSA:1.20.200.30 1 358 3.5E-120 T 31-10-2018 DY252_13930 5e274d05ac8efa55d6d5a313089113eb 445 Pfam PF10397 Adenylosuccinate lyase C-terminus 363 435 2.5E-8 T 31-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DY252_13930 5e274d05ac8efa55d6d5a313089113eb 445 ProSitePatterns PS00163 Fumarate lyases signature. 274 283 - T 31-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DY252_13930 5e274d05ac8efa55d6d5a313089113eb 445 SMART SM00998 362 436 6.1E-7 T 31-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DY252_15425 175b50d7860b7e09b8ddd2f1a23f83ea 149 Pfam PF00034 Cytochrome c 56 136 1.5E-10 T 31-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_15425 175b50d7860b7e09b8ddd2f1a23f83ea 149 Gene3D G3DSA:1.10.760.10 39 143 3.6E-14 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_15425 175b50d7860b7e09b8ddd2f1a23f83ea 149 SUPERFAMILY SSF46626 8 139 3.51E-16 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_15905 8592d65e62ef2f0ca2d20970685675b3 498 SUPERFAMILY SSF52200 18 124 1.96E-7 T 31-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily DY252_15905 8592d65e62ef2f0ca2d20970685675b3 498 Pfam PF13676 TIR domain 18 124 1.9E-12 T 31-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 DY252_15905 8592d65e62ef2f0ca2d20970685675b3 498 Gene3D G3DSA:3.40.50.10140 1 128 2.0E-12 T 31-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily DY252_14505 5a7f1f2ebc140e526db7a18167ca44ba 333 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 1.2E-22 T 31-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DY252_14505 5a7f1f2ebc140e526db7a18167ca44ba 333 SUPERFAMILY SSF51735 2 153 2.84E-48 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_14505 5a7f1f2ebc140e526db7a18167ca44ba 333 SUPERFAMILY SSF55347 126 293 6.7E-36 T 31-10-2018 DY252_14505 5a7f1f2ebc140e526db7a18167ca44ba 333 Gene3D G3DSA:3.40.50.720 1 117 7.0E-35 T 31-10-2018 DY252_14505 5a7f1f2ebc140e526db7a18167ca44ba 333 Gene3D G3DSA:3.30.360.10 120 331 1.3E-46 T 31-10-2018 DY252_14505 5a7f1f2ebc140e526db7a18167ca44ba 333 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 133 197 1.9E-4 T 31-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DY252_09210 def2b6302a854e4d5a60dfae67509cb3 119 SUPERFAMILY SSF158757 14 91 1.7E-37 T 31-10-2018 IPR036810 SMc04008-like superfamily DY252_09210 def2b6302a854e4d5a60dfae67509cb3 119 Pfam PF06844 Protein of unknown function (DUF1244) 41 106 4.0E-36 T 31-10-2018 IPR023163 SMc04008-like domain DY252_09210 def2b6302a854e4d5a60dfae67509cb3 119 Gene3D G3DSA:1.10.3340.10 11 114 5.5E-46 T 31-10-2018 IPR036810 SMc04008-like superfamily DY252_15365 d54ac6e3344fdb7f06f3a954da852e81 221 SUPERFAMILY SSF81901 5 175 1.66E-39 T 31-10-2018 DY252_15365 d54ac6e3344fdb7f06f3a954da852e81 221 Gene3D G3DSA:1.25.40.10 4 219 2.3E-42 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_15365 d54ac6e3344fdb7f06f3a954da852e81 221 Pfam PF08238 Sel1 repeat 71 99 7.9E-5 T 31-10-2018 IPR006597 Sel1-like repeat DY252_15365 d54ac6e3344fdb7f06f3a954da852e81 221 Pfam PF08238 Sel1 repeat 5 31 66.0 T 31-10-2018 IPR006597 Sel1-like repeat DY252_15365 d54ac6e3344fdb7f06f3a954da852e81 221 Pfam PF08238 Sel1 repeat 144 175 0.0011 T 31-10-2018 IPR006597 Sel1-like repeat DY252_15365 d54ac6e3344fdb7f06f3a954da852e81 221 Pfam PF08238 Sel1 repeat 33 65 3.5E-5 T 31-10-2018 IPR006597 Sel1-like repeat DY252_15365 d54ac6e3344fdb7f06f3a954da852e81 221 Pfam PF08238 Sel1 repeat 108 140 1.5E-4 T 31-10-2018 IPR006597 Sel1-like repeat DY252_15365 d54ac6e3344fdb7f06f3a954da852e81 221 SMART SM00671 107 142 1.9E-5 T 31-10-2018 IPR006597 Sel1-like repeat DY252_15365 d54ac6e3344fdb7f06f3a954da852e81 221 SMART SM00671 69 104 0.17 T 31-10-2018 IPR006597 Sel1-like repeat DY252_15365 d54ac6e3344fdb7f06f3a954da852e81 221 SMART SM00671 33 68 3.9E-6 T 31-10-2018 IPR006597 Sel1-like repeat DY252_15365 d54ac6e3344fdb7f06f3a954da852e81 221 SMART SM00671 143 178 0.0092 T 31-10-2018 IPR006597 Sel1-like repeat DY252_00610 8c7668e6c541323f83eeea85993b8285 279 Gene3D G3DSA:3.20.190.10 2 135 2.5E-36 T 31-10-2018 IPR035937 MutM-like, N-terminal DY252_00610 8c7668e6c541323f83eeea85993b8285 279 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 279 43.195 T 31-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 DY252_00610 8c7668e6c541323f83eeea85993b8285 279 SUPERFAMILY SSF81624 2 142 7.98E-38 T 31-10-2018 IPR035937 MutM-like, N-terminal DY252_00610 8c7668e6c541323f83eeea85993b8285 279 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 137 226 1.2E-26 T 31-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DY252_00610 8c7668e6c541323f83eeea85993b8285 279 SUPERFAMILY SSF46946 137 226 1.57E-28 T 31-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DY252_00610 8c7668e6c541323f83eeea85993b8285 279 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 119 2.2E-32 T 31-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DY252_00610 8c7668e6c541323f83eeea85993b8285 279 SMART SM00898 2 121 1.4E-48 T 31-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DY252_00610 8c7668e6c541323f83eeea85993b8285 279 SUPERFAMILY SSF57716 225 279 1.37E-15 T 31-10-2018 DY252_00610 8c7668e6c541323f83eeea85993b8285 279 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 278 4.4E-90 T 31-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 DY252_00610 8c7668e6c541323f83eeea85993b8285 279 SMART SM01232 137 229 8.1E-46 T 31-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DY252_00610 8c7668e6c541323f83eeea85993b8285 279 Gene3D G3DSA:1.10.8.50 139 279 1.5E-48 T 31-10-2018 DY252_00610 8c7668e6c541323f83eeea85993b8285 279 Pfam PF06827 Zinc finger found in FPG and IleRS 249 279 9.1E-9 T 31-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 DY252_12505 267088c57d4d7fd8dbca83b58cd9c5f6 767 Pfam PF03176 MMPL family 180 320 5.0E-5 T 31-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 DY252_12505 267088c57d4d7fd8dbca83b58cd9c5f6 767 SUPERFAMILY SSF82866 607 754 3.01E-12 T 31-10-2018 DY252_12505 267088c57d4d7fd8dbca83b58cd9c5f6 767 SUPERFAMILY SSF82866 205 390 7.72E-15 T 31-10-2018 DY252_10170 b2569d6d717dc8ae641f5574887d2a36 211 Gene3D G3DSA:3.40.50.1000 2 207 4.6E-58 T 31-10-2018 IPR023214 HAD superfamily DY252_10170 b2569d6d717dc8ae641f5574887d2a36 211 SUPERFAMILY SSF56784 22 206 5.42E-46 T 31-10-2018 IPR036412 HAD-like superfamily DY252_10170 b2569d6d717dc8ae641f5574887d2a36 211 Pfam PF13344 Haloacid dehalogenase-like hydrolase 30 82 2.2E-6 T 31-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DY252_10170 b2569d6d717dc8ae641f5574887d2a36 211 PIRSF PIRSF004682 21 210 1.0E-59 T 31-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 DY252_10170 b2569d6d717dc8ae641f5574887d2a36 211 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 29 177 1.0E-32 T 31-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 DY252_10170 b2569d6d717dc8ae641f5574887d2a36 211 Pfam PF13242 HAD-hyrolase-like 130 200 4.2E-16 T 31-10-2018 DY252_10170 b2569d6d717dc8ae641f5574887d2a36 211 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 28 173 1.7E-38 T 31-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 DY252_16410 0d995884ba885fd96600fac1586233ca 271 Gene3D G3DSA:3.30.2140.10 46 250 7.4E-65 T 31-10-2018 DY252_16410 0d995884ba885fd96600fac1586233ca 271 Gene3D G3DSA:2.40.128.150 85 182 7.4E-65 T 31-10-2018 DY252_16410 0d995884ba885fd96600fac1586233ca 271 SUPERFAMILY SSF54001 47 261 1.96E-60 T 31-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DY252_16410 0d995884ba885fd96600fac1586233ca 271 Pfam PF00797 N-acetyltransferase 42 253 8.8E-55 T 31-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 DY252_07820 9fe87a5fd7438dcade0e350e384a2763 270 SUPERFAMILY SSF52096 6 269 1.42E-71 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_07820 9fe87a5fd7438dcade0e350e384a2763 270 Gene3D G3DSA:1.10.12.10 212 270 1.1E-18 T 31-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DY252_07820 9fe87a5fd7438dcade0e350e384a2763 270 Gene3D G3DSA:3.90.226.10 2 211 6.1E-61 T 31-10-2018 DY252_07820 9fe87a5fd7438dcade0e350e384a2763 270 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 269 5.0E-42 T 31-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DY252_07820 9fe87a5fd7438dcade0e350e384a2763 270 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 110 130 - T 31-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DY252_05795 3bd69cb9e83629ea8f66afb9be72bbca 351 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 291 333 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_05795 3bd69cb9e83629ea8f66afb9be72bbca 351 Pfam PF12833 Helix-turn-helix domain 260 338 3.2E-20 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_05795 3bd69cb9e83629ea8f66afb9be72bbca 351 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 321 7.0E-6 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_05795 3bd69cb9e83629ea8f66afb9be72bbca 351 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 321 337 7.0E-6 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_05795 3bd69cb9e83629ea8f66afb9be72bbca 351 SUPERFAMILY SSF46689 290 343 1.3E-12 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_05795 3bd69cb9e83629ea8f66afb9be72bbca 351 Gene3D G3DSA:1.10.10.60 236 343 1.3E-26 T 31-10-2018 DY252_05795 3bd69cb9e83629ea8f66afb9be72bbca 351 SMART SM00342 254 337 2.8E-25 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 SUPERFAMILY SSF82714 711 794 2.62E-14 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 SUPERFAMILY SSF82866 296 493 5.1E-44 T 31-10-2018 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 Gene3D G3DSA:3.30.70.1430 50 806 8.9E-283 T 31-10-2018 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 Gene3D G3DSA:1.20.1640.10 20 508 8.9E-283 T 31-10-2018 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 SUPERFAMILY SSF82693 561 659 6.8E-17 T 31-10-2018 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 Pfam PF00873 AcrB/AcrD/AcrF family 14 1015 4.0E-252 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 Gene3D G3DSA:1.20.1640.10 509 1012 8.9E-283 T 31-10-2018 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 SUPERFAMILY SSF82693 147 316 9.94E-15 T 31-10-2018 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 Gene3D G3DSA:3.30.70.1430 563 658 8.9E-283 T 31-10-2018 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 SUPERFAMILY SSF82693 50 144 1.33E-20 T 31-10-2018 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 Gene3D G3DSA:3.30.70.1440 659 855 8.9E-283 T 31-10-2018 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 SUPERFAMILY SSF82714 193 271 1.83E-12 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 SUPERFAMILY SSF82693 664 844 4.36E-9 T 31-10-2018 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 Gene3D G3DSA:3.30.70.1320 144 330 8.9E-283 T 31-10-2018 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 Gene3D G3DSA:3.30.2090.10 710 798 8.9E-283 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 9.8E-72 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 PRINTS PR00702 Acriflavin resistance protein family signature 48 66 9.8E-72 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 9.8E-72 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 9.8E-72 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 PRINTS PR00702 Acriflavin resistance protein family signature 548 565 9.8E-72 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 9.8E-72 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 PRINTS PR00702 Acriflavin resistance protein family signature 614 628 9.8E-72 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 PRINTS PR00702 Acriflavin resistance protein family signature 20 44 9.8E-72 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 9.8E-72 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 Gene3D G3DSA:3.30.2090.10 188 274 8.9E-283 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_20095 5802ef5c3229d9dedac12274c26e0b31 1063 SUPERFAMILY SSF82866 821 1015 4.84E-43 T 31-10-2018 DY252_15495 e73554516064cbefa0a5f96e38e28421 98 Hamap MF_00580 10 kDa chaperonin [groS]. 5 98 27.403 T 31-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DY252_15495 e73554516064cbefa0a5f96e38e28421 98 Gene3D G3DSA:2.30.33.40 2 98 3.8E-40 T 31-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 DY252_15495 e73554516064cbefa0a5f96e38e28421 98 SMART SM00883 5 97 1.4E-60 T 31-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DY252_15495 e73554516064cbefa0a5f96e38e28421 98 ProSitePatterns PS00681 Chaperonins cpn10 signature. 6 30 - T 31-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 DY252_15495 e73554516064cbefa0a5f96e38e28421 98 Pfam PF00166 Chaperonin 10 Kd subunit 5 96 4.6E-37 T 31-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DY252_15495 e73554516064cbefa0a5f96e38e28421 98 SUPERFAMILY SSF50129 4 97 8.07E-37 T 31-10-2018 IPR011032 GroES-like superfamily DY252_15495 e73554516064cbefa0a5f96e38e28421 98 PRINTS PR00297 10kDa chaperonin signature 84 97 2.7E-34 T 31-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DY252_15495 e73554516064cbefa0a5f96e38e28421 98 PRINTS PR00297 10kDa chaperonin signature 63 75 2.7E-34 T 31-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DY252_15495 e73554516064cbefa0a5f96e38e28421 98 PRINTS PR00297 10kDa chaperonin signature 6 21 2.7E-34 T 31-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DY252_15495 e73554516064cbefa0a5f96e38e28421 98 PRINTS PR00297 10kDa chaperonin signature 28 49 2.7E-34 T 31-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DY252_16345 98ed78780cf0f6f163d36bfc1ee1c46d 243 Gene3D G3DSA:1.10.10.10 7 86 9.5E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_16345 98ed78780cf0f6f163d36bfc1ee1c46d 243 SUPERFAMILY SSF46785 11 82 2.45E-20 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_16345 98ed78780cf0f6f163d36bfc1ee1c46d 243 SMART SM00895 103 231 4.6E-23 T 31-10-2018 IPR011711 GntR, C-terminal DY252_16345 98ed78780cf0f6f163d36bfc1ee1c46d 243 SUPERFAMILY SSF48008 99 239 3.14E-30 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_16345 98ed78780cf0f6f163d36bfc1ee1c46d 243 Gene3D G3DSA:1.20.120.530 94 240 2.6E-31 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_16345 98ed78780cf0f6f163d36bfc1ee1c46d 243 SMART SM00345 19 78 8.0E-21 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_16345 98ed78780cf0f6f163d36bfc1ee1c46d 243 Pfam PF07729 FCD domain 103 230 2.5E-26 T 31-10-2018 IPR011711 GntR, C-terminal DY252_16345 98ed78780cf0f6f163d36bfc1ee1c46d 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 78 2.0E-20 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_16345 98ed78780cf0f6f163d36bfc1ee1c46d 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 2.3E-9 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_16345 98ed78780cf0f6f163d36bfc1ee1c46d 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 2.3E-9 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_07280 8c607ae2488baf52d5629c42bc1aafcf 360 SMART SM00937 64 179 2.6E-56 T 31-10-2018 IPR005139 Peptide chain release factor GO:0006415 DY252_07280 8c607ae2488baf52d5629c42bc1aafcf 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 6 359 4.1E-154 T 31-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 DY252_07280 8c607ae2488baf52d5629c42bc1aafcf 360 Pfam PF00472 RF-1 domain 212 321 3.9E-41 T 31-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DY252_07280 8c607ae2488baf52d5629c42bc1aafcf 360 SUPERFAMILY SSF75620 12 355 2.09E-128 T 31-10-2018 DY252_07280 8c607ae2488baf52d5629c42bc1aafcf 360 Pfam PF03462 PCRF domain 12 204 5.3E-68 T 31-10-2018 IPR005139 Peptide chain release factor GO:0006415 DY252_07280 8c607ae2488baf52d5629c42bc1aafcf 360 Gene3D G3DSA:3.30.160.20 211 297 2.2E-95 T 31-10-2018 DY252_07280 8c607ae2488baf52d5629c42bc1aafcf 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 4 359 39.505 T 31-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 DY252_07280 8c607ae2488baf52d5629c42bc1aafcf 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 31-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DY252_07280 8c607ae2488baf52d5629c42bc1aafcf 360 Gene3D G3DSA:3.30.70.1660 113 344 2.2E-95 T 31-10-2018 DY252_06995 f32af34968ed79d630db9d64ca7431a4 169 Pfam PF13710 ACT domain 18 80 2.0E-11 T 31-10-2018 DY252_06995 f32af34968ed79d630db9d64ca7431a4 169 SUPERFAMILY SSF55021 88 166 1.32E-24 T 31-10-2018 DY252_06995 f32af34968ed79d630db9d64ca7431a4 169 SUPERFAMILY SSF55021 8 83 2.83E-18 T 31-10-2018 DY252_06995 f32af34968ed79d630db9d64ca7431a4 169 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 8 83 4.0E-29 T 31-10-2018 DY252_06995 f32af34968ed79d630db9d64ca7431a4 169 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 8 165 1.1E-52 T 31-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DY252_06995 f32af34968ed79d630db9d64ca7431a4 169 Gene3D G3DSA:3.30.70.260 6 85 6.0E-31 T 31-10-2018 DY252_06995 f32af34968ed79d630db9d64ca7431a4 169 Gene3D G3DSA:3.30.70.1150 91 169 3.4E-26 T 31-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal DY252_06995 f32af34968ed79d630db9d64ca7431a4 169 Pfam PF10369 Small subunit of acetolactate synthase 92 165 1.3E-25 T 31-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DY252_16195 6bd33925890765e5ca77b4bcf0440246 412 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 19 398 3.9E-114 T 31-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DY252_16195 6bd33925890765e5ca77b4bcf0440246 412 PIRSF PIRSF001235 6 404 9.7E-118 T 31-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DY252_16195 6bd33925890765e5ca77b4bcf0440246 412 SUPERFAMILY SSF55031 209 319 4.01E-23 T 31-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DY252_16195 6bd33925890765e5ca77b4bcf0440246 412 Gene3D G3DSA:3.30.70.360 209 322 2.1E-128 T 31-10-2018 DY252_16195 6bd33925890765e5ca77b4bcf0440246 412 SUPERFAMILY SSF53187 14 401 1.03E-76 T 31-10-2018 DY252_16195 6bd33925890765e5ca77b4bcf0440246 412 Gene3D G3DSA:3.40.630.10 19 398 2.1E-128 T 31-10-2018 DY252_16195 6bd33925890765e5ca77b4bcf0440246 412 Pfam PF01546 Peptidase family M20/M25/M40 74 401 4.2E-25 T 31-10-2018 IPR002933 Peptidase M20 GO:0016787 DY252_20340 4514608a27ff230eb86a5151b0b89009 291 Pfam PF02629 CoA binding domain 6 99 2.0E-31 T 31-10-2018 IPR003781 CoA-binding GO:0048037 DY252_20340 4514608a27ff230eb86a5151b0b89009 291 Pfam PF00549 CoA-ligase 151 272 7.9E-23 T 31-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DY252_20340 4514608a27ff230eb86a5151b0b89009 291 Gene3D G3DSA:3.40.50.720 2 123 6.6E-52 T 31-10-2018 DY252_20340 4514608a27ff230eb86a5151b0b89009 291 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 31-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site DY252_20340 4514608a27ff230eb86a5151b0b89009 291 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 31-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site DY252_20340 4514608a27ff230eb86a5151b0b89009 291 Gene3D G3DSA:3.40.50.261 124 290 1.2E-74 T 31-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DY252_20340 4514608a27ff230eb86a5151b0b89009 291 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 289 43.234 T 31-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DY252_20340 4514608a27ff230eb86a5151b0b89009 291 SMART SM00881 4 100 6.7E-38 T 31-10-2018 IPR003781 CoA-binding GO:0048037 DY252_20340 4514608a27ff230eb86a5151b0b89009 291 SUPERFAMILY SSF51735 1 122 9.57E-44 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_20340 4514608a27ff230eb86a5151b0b89009 291 SUPERFAMILY SSF52210 123 288 5.89E-56 T 31-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DY252_20340 4514608a27ff230eb86a5151b0b89009 291 PIRSF PIRSF001553 1 291 1.1E-133 T 31-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DY252_20340 4514608a27ff230eb86a5151b0b89009 291 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 2.1E-144 T 31-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DY252_20340 4514608a27ff230eb86a5151b0b89009 291 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 4.3E-40 T 31-10-2018 DY252_20340 4514608a27ff230eb86a5151b0b89009 291 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 4.3E-40 T 31-10-2018 DY252_20340 4514608a27ff230eb86a5151b0b89009 291 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 4.3E-40 T 31-10-2018 DY252_20340 4514608a27ff230eb86a5151b0b89009 291 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 4.3E-40 T 31-10-2018 DY252_03110 b3c0561818b5f61864c3dde523fbb689 598 Gene3D G3DSA:1.20.58.100 435 547 5.3E-38 T 31-10-2018 DY252_03110 b3c0561818b5f61864c3dde523fbb689 598 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 10 598 2.1E-290 T 31-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_03110 b3c0561818b5f61864c3dde523fbb689 598 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 598 3.8E-42 T 31-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_03110 b3c0561818b5f61864c3dde523fbb689 598 PIRSF PIRSF000171 3 587 3.0E-40 T 31-10-2018 DY252_03110 b3c0561818b5f61864c3dde523fbb689 598 SUPERFAMILY SSF51905 5 427 6.7E-80 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_03110 b3c0561818b5f61864c3dde523fbb689 598 Gene3D G3DSA:3.90.700.10 250 353 3.6E-162 T 31-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_03110 b3c0561818b5f61864c3dde523fbb689 598 Gene3D G3DSA:3.50.50.60 13 419 3.6E-162 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_03110 b3c0561818b5f61864c3dde523fbb689 598 SUPERFAMILY SSF56425 240 358 1.5E-40 T 31-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_03110 b3c0561818b5f61864c3dde523fbb689 598 Pfam PF00890 FAD binding domain 13 408 3.3E-120 T 31-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_03110 b3c0561818b5f61864c3dde523fbb689 598 SUPERFAMILY SSF46977 454 598 9.29E-47 T 31-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_03110 b3c0561818b5f61864c3dde523fbb689 598 Gene3D G3DSA:4.10.80.40 548 598 6.4E-9 T 31-10-2018 DY252_03110 b3c0561818b5f61864c3dde523fbb689 598 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 13 598 1.1E-239 T 31-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_03110 b3c0561818b5f61864c3dde523fbb689 598 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 47 56 - T 31-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_10010 d97d786ff9616e5f100f1f095cf9f135 240 Gene3D G3DSA:3.40.50.150 52 240 1.4E-19 T 31-10-2018 DY252_10010 d97d786ff9616e5f100f1f095cf9f135 240 SUPERFAMILY SSF53335 54 205 2.54E-17 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_04570 5e00e90d7620df0d38f6f8177d207fca 510 Pfam PF00361 Proton-conducting membrane transporter 127 422 4.1E-46 T 31-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_04570 5e00e90d7620df0d38f6f8177d207fca 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 161 185 7.1E-10 T 31-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_04570 5e00e90d7620df0d38f6f8177d207fca 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 326 345 7.1E-10 T 31-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_04570 5e00e90d7620df0d38f6f8177d207fca 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 131 150 7.1E-10 T 31-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_04570 5e00e90d7620df0d38f6f8177d207fca 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 7.1E-10 T 31-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_04570 5e00e90d7620df0d38f6f8177d207fca 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 7.1E-10 T 31-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_05925 c5f545238741b63c0c4184f7b5e8cb36 232 SUPERFAMILY SSF46785 149 222 1.85E-9 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_05925 c5f545238741b63c0c4184f7b5e8cb36 232 Gene3D G3DSA:2.60.120.10 7 136 5.6E-19 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_05925 c5f545238741b63c0c4184f7b5e8cb36 232 Gene3D G3DSA:1.10.10.10 137 229 2.7E-24 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_05925 c5f545238741b63c0c4184f7b5e8cb36 232 Pfam PF13545 Crp-like helix-turn-helix domain 151 219 2.2E-14 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_05925 c5f545238741b63c0c4184f7b5e8cb36 232 SMART SM00419 166 213 1.4E-4 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_05925 c5f545238741b63c0c4184f7b5e8cb36 232 Pfam PF00027 Cyclic nucleotide-binding domain 33 117 1.0E-9 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_05925 c5f545238741b63c0c4184f7b5e8cb36 232 SUPERFAMILY SSF51206 9 144 1.09E-18 T 31-10-2018 IPR018490 Cyclic nucleotide-binding-like DY252_15510 79415642bb02deb6916192c3b3ac094c 298 SUPERFAMILY SSF161111 118 294 2.22E-30 T 31-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DY252_15510 79415642bb02deb6916192c3b3ac094c 298 Gene3D G3DSA:1.20.1510.10 122 296 4.5E-10 T 31-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DY252_15510 79415642bb02deb6916192c3b3ac094c 298 Pfam PF01545 Cation efflux family 127 294 2.1E-10 T 31-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DY252_15510 79415642bb02deb6916192c3b3ac094c 298 SUPERFAMILY SSF55008 33 95 1.57E-8 T 31-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DY252_15455 79415642bb02deb6916192c3b3ac094c 298 SUPERFAMILY SSF161111 118 294 2.22E-30 T 31-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DY252_15455 79415642bb02deb6916192c3b3ac094c 298 Gene3D G3DSA:1.20.1510.10 122 296 4.5E-10 T 31-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DY252_15455 79415642bb02deb6916192c3b3ac094c 298 Pfam PF01545 Cation efflux family 127 294 2.1E-10 T 31-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DY252_15455 79415642bb02deb6916192c3b3ac094c 298 SUPERFAMILY SSF55008 33 95 1.57E-8 T 31-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DY252_21725 232cd73ccebd8bc8ae7b11746a2c36a8 274 Gene3D G3DSA:3.40.190.10 129 228 1.4E-8 T 31-10-2018 DY252_21725 232cd73ccebd8bc8ae7b11746a2c36a8 274 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 264 9.6E-8 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_21725 232cd73ccebd8bc8ae7b11746a2c36a8 274 SUPERFAMILY SSF53850 36 267 8.06E-18 T 31-10-2018 DY252_21725 232cd73ccebd8bc8ae7b11746a2c36a8 274 Gene3D G3DSA:3.40.190.10 57 266 1.4E-8 T 31-10-2018 DY252_14145 cf78d79399e6c35e8b3bf2ea714d4a39 304 SUPERFAMILY SSF56317 5 246 7.46E-14 T 31-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DY252_14145 cf78d79399e6c35e8b3bf2ea714d4a39 304 Gene3D G3DSA:3.60.110.10 6 275 2.1E-7 T 31-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DY252_10465 54ba1f2888c92eed7a8057a46c09592b 396 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 392 2.7E-95 T 31-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 DY252_10465 54ba1f2888c92eed7a8057a46c09592b 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 4.3E-16 T 31-10-2018 DY252_10465 54ba1f2888c92eed7a8057a46c09592b 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 4.3E-16 T 31-10-2018 DY252_10465 54ba1f2888c92eed7a8057a46c09592b 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 4.3E-16 T 31-10-2018 DY252_10465 54ba1f2888c92eed7a8057a46c09592b 396 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 4.3E-16 T 31-10-2018 DY252_10465 54ba1f2888c92eed7a8057a46c09592b 396 Gene3D G3DSA:3.30.9.50 76 274 4.3E-84 T 31-10-2018 DY252_10465 54ba1f2888c92eed7a8057a46c09592b 396 SUPERFAMILY SSF51905 3 389 8.87E-52 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_10465 54ba1f2888c92eed7a8057a46c09592b 396 Gene3D G3DSA:3.50.50.60 5 342 4.3E-84 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_10465 54ba1f2888c92eed7a8057a46c09592b 396 Pfam PF01494 FAD binding domain 3 345 4.9E-29 T 31-10-2018 IPR002938 FAD-binding domain GO:0071949 DY252_17690 12eaf04fc510d7ee2f73cd4690f25628 327 SMART SM00382 121 228 7.5E-4 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_17690 12eaf04fc510d7ee2f73cd4690f25628 327 SMART SM00962 122 311 9.8E-13 T 31-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DY252_17690 12eaf04fc510d7ee2f73cd4690f25628 327 SUPERFAMILY SSF52540 120 279 3.27E-17 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_17690 12eaf04fc510d7ee2f73cd4690f25628 327 Gene3D G3DSA:3.40.50.300 117 315 8.2E-31 T 31-10-2018 DY252_17690 12eaf04fc510d7ee2f73cd4690f25628 327 Pfam PF00448 SRP54-type protein, GTPase domain 124 306 1.9E-19 T 31-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DY252_17125 4f9b9fe39f28d5c339c81501657afb02 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 294 2.2E-19 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_17125 4f9b9fe39f28d5c339c81501657afb02 297 SUPERFAMILY SSF161098 58 282 6.54E-56 T 31-10-2018 IPR035906 MetI-like superfamily DY252_17125 4f9b9fe39f28d5c339c81501657afb02 297 Gene3D G3DSA:1.10.3720.10 54 295 1.3E-65 T 31-10-2018 IPR035906 MetI-like superfamily DY252_02440 456bcb28bacc31766d2913da7f7cd853 314 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 231 304 1.0E-14 T 31-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DY252_02440 456bcb28bacc31766d2913da7f7cd853 314 Gene3D G3DSA:3.40.190.10 108 207 1.5E-79 T 31-10-2018 DY252_02440 456bcb28bacc31766d2913da7f7cd853 314 Gene3D G3DSA:3.30.160.40 225 314 1.8E-22 T 31-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DY252_02440 456bcb28bacc31766d2913da7f7cd853 314 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 305 6.0E-101 T 31-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DY252_02440 456bcb28bacc31766d2913da7f7cd853 314 SUPERFAMILY SSF54782 225 313 4.45E-18 T 31-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DY252_02440 456bcb28bacc31766d2913da7f7cd853 314 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 217 1.6E-73 T 31-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DY252_02440 456bcb28bacc31766d2913da7f7cd853 314 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 236 252 - T 31-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DY252_02440 456bcb28bacc31766d2913da7f7cd853 314 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 306 34.451 T 31-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DY252_02440 456bcb28bacc31766d2913da7f7cd853 314 SUPERFAMILY SSF53850 6 223 1.76E-76 T 31-10-2018 DY252_02440 456bcb28bacc31766d2913da7f7cd853 314 Gene3D G3DSA:3.40.190.10 7 215 1.5E-79 T 31-10-2018 DY252_02440 456bcb28bacc31766d2913da7f7cd853 314 PRINTS PR00151 Porphobilinogen deaminase signature 148 165 4.0E-45 T 31-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DY252_02440 456bcb28bacc31766d2913da7f7cd853 314 PRINTS PR00151 Porphobilinogen deaminase signature 235 252 4.0E-45 T 31-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DY252_02440 456bcb28bacc31766d2913da7f7cd853 314 PRINTS PR00151 Porphobilinogen deaminase signature 129 146 4.0E-45 T 31-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DY252_02440 456bcb28bacc31766d2913da7f7cd853 314 PRINTS PR00151 Porphobilinogen deaminase signature 50 70 4.0E-45 T 31-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DY252_02440 456bcb28bacc31766d2913da7f7cd853 314 PRINTS PR00151 Porphobilinogen deaminase signature 81 100 4.0E-45 T 31-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DY252_02440 456bcb28bacc31766d2913da7f7cd853 314 PIRSF PIRSF001438 1 314 1.0E-112 T 31-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DY252_17770 f842a6137e46a60973eeec5b731ada1f 553 Gene3D G3DSA:3.40.50.2300 7 163 2.0E-30 T 31-10-2018 DY252_17770 f842a6137e46a60973eeec5b731ada1f 553 SUPERFAMILY SSF52738 365 550 2.75E-60 T 31-10-2018 IPR035909 Methylesterase CheB, C-terminal DY252_17770 f842a6137e46a60973eeec5b731ada1f 553 Pfam PF01339 CheB methylesterase 368 546 1.3E-51 T 31-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DY252_17770 f842a6137e46a60973eeec5b731ada1f 553 Gene3D G3DSA:3.40.50.180 360 552 3.9E-62 T 31-10-2018 IPR035909 Methylesterase CheB, C-terminal DY252_17770 f842a6137e46a60973eeec5b731ada1f 553 SUPERFAMILY SSF52172 8 121 2.42E-27 T 31-10-2018 IPR011006 CheY-like superfamily DY252_17770 f842a6137e46a60973eeec5b731ada1f 553 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 10 551 32.443 T 31-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DY252_17770 f842a6137e46a60973eeec5b731ada1f 553 SMART SM00448 10 125 6.1E-23 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_17770 f842a6137e46a60973eeec5b731ada1f 553 Pfam PF00072 Response regulator receiver domain 12 121 1.9E-22 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_17110 cb726fae4a2e151597bacf59217945c5 261 Pfam PF00455 DeoR C terminal sensor domain 75 232 1.0E-39 T 31-10-2018 IPR014036 DeoR C-terminal sensor domain DY252_17110 cb726fae4a2e151597bacf59217945c5 261 Gene3D G3DSA:3.30.750.70 71 133 2.2E-7 T 31-10-2018 DY252_17110 cb726fae4a2e151597bacf59217945c5 261 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 31-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DY252_17110 cb726fae4a2e151597bacf59217945c5 261 SUPERFAMILY SSF100950 74 232 2.39E-22 T 31-10-2018 IPR037171 NagB/RpiA transferase-like DY252_17110 cb726fae4a2e151597bacf59217945c5 261 Gene3D G3DSA:1.10.10.10 1 55 2.0E-9 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_17110 cb726fae4a2e151597bacf59217945c5 261 SMART SM01134 73 234 4.2E-55 T 31-10-2018 DY252_17110 cb726fae4a2e151597bacf59217945c5 261 SMART SM00420 6 58 2.1E-16 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_17110 cb726fae4a2e151597bacf59217945c5 261 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.4E-9 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_17110 cb726fae4a2e151597bacf59217945c5 261 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.4E-9 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_17110 cb726fae4a2e151597bacf59217945c5 261 SUPERFAMILY SSF46785 3 59 2.13E-13 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_17110 cb726fae4a2e151597bacf59217945c5 261 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 2.5E-16 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_01065 62de159ffdd3c4b67ebc94b4e7735f83 888 Pfam PF00009 Elongation factor Tu GTP binding domain 395 551 2.7E-31 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_01065 62de159ffdd3c4b67ebc94b4e7735f83 888 Pfam PF11987 Translation-initiation factor 2 677 779 2.8E-37 T 31-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 DY252_01065 62de159ffdd3c4b67ebc94b4e7735f83 888 Gene3D G3DSA:3.40.50.300 387 562 1.5E-69 T 31-10-2018 DY252_01065 62de159ffdd3c4b67ebc94b4e7735f83 888 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 393 546 6.8E-31 T 31-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DY252_01065 62de159ffdd3c4b67ebc94b4e7735f83 888 SUPERFAMILY SSF50447 791 884 3.76E-30 T 31-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DY252_01065 62de159ffdd3c4b67ebc94b4e7735f83 888 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 315 364 1.2E-16 T 31-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal DY252_01065 62de159ffdd3c4b67ebc94b4e7735f83 888 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 309 884 3.4E-246 T 31-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DY252_01065 62de159ffdd3c4b67ebc94b4e7735f83 888 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 16 53 4.2E-12 T 31-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial DY252_01065 62de159ffdd3c4b67ebc94b4e7735f83 888 SUPERFAMILY SSF52540 386 562 4.75E-48 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_01065 62de159ffdd3c4b67ebc94b4e7735f83 888 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 886 17.117 T 31-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DY252_01065 62de159ffdd3c4b67ebc94b4e7735f83 888 SUPERFAMILY SSF50447 564 647 6.24E-25 T 31-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DY252_01065 62de159ffdd3c4b67ebc94b4e7735f83 888 Gene3D G3DSA:2.40.30.10 563 681 1.2E-40 T 31-10-2018 DY252_01065 62de159ffdd3c4b67ebc94b4e7735f83 888 Gene3D G3DSA:3.40.50.10050 684 790 1.5E-38 T 31-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DY252_01065 62de159ffdd3c4b67ebc94b4e7735f83 888 Gene3D G3DSA:2.40.30.10 791 886 8.0E-32 T 31-10-2018 DY252_01065 62de159ffdd3c4b67ebc94b4e7735f83 888 SUPERFAMILY SSF52156 670 796 1.44E-38 T 31-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DY252_01065 62de159ffdd3c4b67ebc94b4e7735f83 888 ProSitePatterns PS01176 Initiation factor 2 signature. 839 861 - T 31-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DY252_00350 07eb83f703fd75afab124d093d6dce84 379 Gene3D G3DSA:2.60.40.420 72 226 1.1E-46 T 31-10-2018 IPR008972 Cupredoxin DY252_00350 07eb83f703fd75afab124d093d6dce84 379 Pfam PF07732 Multicopper oxidase 116 223 1.5E-21 T 31-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 DY252_00350 07eb83f703fd75afab124d093d6dce84 379 SUPERFAMILY SSF49503 103 223 4.43E-34 T 31-10-2018 IPR008972 Cupredoxin DY252_00350 07eb83f703fd75afab124d093d6dce84 379 SUPERFAMILY SSF49503 241 376 8.36E-19 T 31-10-2018 IPR008972 Cupredoxin DY252_00350 07eb83f703fd75afab124d093d6dce84 379 Gene3D G3DSA:2.60.40.420 245 375 3.0E-24 T 31-10-2018 IPR008972 Cupredoxin DY252_00350 07eb83f703fd75afab124d093d6dce84 379 Pfam PF07731 Multicopper oxidase 267 376 9.9E-8 T 31-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 DY252_00350 07eb83f703fd75afab124d093d6dce84 379 PRINTS PR00695 Copper containing nitrite reductase signature 188 203 9.4E-5 T 31-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 DY252_00350 07eb83f703fd75afab124d093d6dce84 379 PRINTS PR00695 Copper containing nitrite reductase signature 205 221 9.4E-5 T 31-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 DY252_00350 07eb83f703fd75afab124d093d6dce84 379 PRINTS PR00695 Copper containing nitrite reductase signature 128 144 9.4E-5 T 31-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 DY252_09070 f52ae7a5f7387e14badd81c9af2c6d73 448 SUPERFAMILY SSF103491 16 429 7.32E-134 T 31-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DY252_09070 f52ae7a5f7387e14badd81c9af2c6d73 448 ProSitePatterns PS00756 Protein secY signature 2. 178 195 - T 31-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DY252_09070 f52ae7a5f7387e14badd81c9af2c6d73 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 407 425 1.2E-98 T 31-10-2018 DY252_09070 f52ae7a5f7387e14badd81c9af2c6d73 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 27 45 1.2E-98 T 31-10-2018 DY252_09070 f52ae7a5f7387e14badd81c9af2c6d73 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 159 184 1.2E-98 T 31-10-2018 DY252_09070 f52ae7a5f7387e14badd81c9af2c6d73 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 375 393 1.2E-98 T 31-10-2018 DY252_09070 f52ae7a5f7387e14badd81c9af2c6d73 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 320 342 1.2E-98 T 31-10-2018 DY252_09070 f52ae7a5f7387e14badd81c9af2c6d73 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 185 208 1.2E-98 T 31-10-2018 DY252_09070 f52ae7a5f7387e14badd81c9af2c6d73 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 120 143 1.2E-98 T 31-10-2018 DY252_09070 f52ae7a5f7387e14badd81c9af2c6d73 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 277 296 1.2E-98 T 31-10-2018 DY252_09070 f52ae7a5f7387e14badd81c9af2c6d73 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 79 99 1.2E-98 T 31-10-2018 DY252_09070 f52ae7a5f7387e14badd81c9af2c6d73 448 PIRSF PIRSF004557 1 446 1.1E-125 T 31-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DY252_09070 f52ae7a5f7387e14badd81c9af2c6d73 448 Hamap MF_01465 Protein translocase subunit SecY [secY]. 14 438 30.021 T 31-10-2018 IPR026593 Protein translocase subunit SecY DY252_09070 f52ae7a5f7387e14badd81c9af2c6d73 448 ProSitePatterns PS00755 Protein secY signature 1. 80 99 - T 31-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DY252_09070 f52ae7a5f7387e14badd81c9af2c6d73 448 Gene3D G3DSA:1.10.3370.10 13 434 1.4E-161 T 31-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DY252_09070 f52ae7a5f7387e14badd81c9af2c6d73 448 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 24 433 2.6E-131 T 31-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DY252_09070 f52ae7a5f7387e14badd81c9af2c6d73 448 Pfam PF00344 SecY translocase 80 422 1.9E-118 T 31-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DY252_17160 8a84a8459530a8cebaed19e25c053128 663 Pfam PF00753 Metallo-beta-lactamase superfamily 127 353 1.6E-31 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_17160 8a84a8459530a8cebaed19e25c053128 663 Pfam PF14864 Alkyl sulfatase C-terminal 537 659 2.4E-37 T 31-10-2018 IPR029229 Alkyl sulfatase, C-terminal DY252_17160 8a84a8459530a8cebaed19e25c053128 663 Gene3D G3DSA:3.30.1050.10 530 662 2.9E-41 T 31-10-2018 IPR036527 SCP2 sterol-binding domain superfamily DY252_17160 8a84a8459530a8cebaed19e25c053128 663 Pfam PF14863 Alkyl sulfatase dimerisation 392 528 1.4E-57 T 31-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 DY252_17160 8a84a8459530a8cebaed19e25c053128 663 SUPERFAMILY SSF55718 539 659 5.3E-34 T 31-10-2018 IPR036527 SCP2 sterol-binding domain superfamily DY252_17160 8a84a8459530a8cebaed19e25c053128 663 Gene3D G3DSA:1.25.40.880 389 529 1.0E-60 T 31-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily DY252_17160 8a84a8459530a8cebaed19e25c053128 663 SMART SM00849 131 353 1.2E-20 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_17160 8a84a8459530a8cebaed19e25c053128 663 SUPERFAMILY SSF56281 30 530 6.86E-150 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_17160 8a84a8459530a8cebaed19e25c053128 663 Gene3D G3DSA:3.60.15.30 28 388 1.0E-152 T 31-10-2018 DY252_00500 ca991d8f49661403cda3ad2d18865281 324 Pfam PF13401 AAA domain 42 171 3.7E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_00500 ca991d8f49661403cda3ad2d18865281 324 SUPERFAMILY SSF52540 31 291 1.83E-14 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_00500 ca991d8f49661403cda3ad2d18865281 324 Gene3D G3DSA:3.40.50.300 26 191 6.8E-11 T 31-10-2018 DY252_00500 ca991d8f49661403cda3ad2d18865281 324 SMART SM00382 40 195 3.4E-8 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_08380 5b131b478c7a376353acaa4fdc51f72e 685 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 487 677 9.8E-31 T 31-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DY252_08380 5b131b478c7a376353acaa4fdc51f72e 685 Gene3D G3DSA:3.30.565.10 113 277 5.8E-16 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_08380 5b131b478c7a376353acaa4fdc51f72e 685 Gene3D G3DSA:3.40.50.2300 291 421 3.6E-31 T 31-10-2018 DY252_08380 5b131b478c7a376353acaa4fdc51f72e 685 SMART SM00331 460 678 4.4E-13 T 31-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DY252_08380 5b131b478c7a376353acaa4fdc51f72e 685 SMART SM00448 299 413 1.3E-29 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_08380 5b131b478c7a376353acaa4fdc51f72e 685 SUPERFAMILY SSF55874 145 254 9.56E-5 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_08380 5b131b478c7a376353acaa4fdc51f72e 685 Pfam PF00072 Response regulator receiver domain 301 413 4.5E-25 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_08380 5b131b478c7a376353acaa4fdc51f72e 685 SUPERFAMILY SSF52172 298 446 2.28E-34 T 31-10-2018 IPR011006 CheY-like superfamily DY252_08380 5b131b478c7a376353acaa4fdc51f72e 685 Pfam PF13581 Histidine kinase-like ATPase domain 119 263 2.0E-15 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_08380 5b131b478c7a376353acaa4fdc51f72e 685 Gene3D G3DSA:3.60.40.10 423 678 2.4E-44 T 31-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DY252_16430 326572d78ab1bf6df1dbc43edb006c9f 293 SUPERFAMILY SSF103481 189 286 3.01E-13 T 31-10-2018 DY252_16430 326572d78ab1bf6df1dbc43edb006c9f 293 SUPERFAMILY SSF103481 47 148 1.31E-9 T 31-10-2018 DY252_16430 326572d78ab1bf6df1dbc43edb006c9f 293 Pfam PF00892 EamA-like transporter family 14 144 3.1E-9 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_16430 326572d78ab1bf6df1dbc43edb006c9f 293 Pfam PF00892 EamA-like transporter family 157 283 4.2E-7 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_21680 2b4754e8d1b363b4037a7921739ae6e1 560 SMART SM00052 305 550 2.5E-51 T 31-10-2018 IPR001633 EAL domain DY252_21680 2b4754e8d1b363b4037a7921739ae6e1 560 SUPERFAMILY SSF141868 317 545 4.32E-65 T 31-10-2018 IPR035919 EAL domain superfamily DY252_21680 2b4754e8d1b363b4037a7921739ae6e1 560 Gene3D G3DSA:3.30.70.270 133 304 1.2E-5 T 31-10-2018 DY252_21680 2b4754e8d1b363b4037a7921739ae6e1 560 Gene3D G3DSA:3.30.450.20 5 124 2.4E-6 T 31-10-2018 DY252_21680 2b4754e8d1b363b4037a7921739ae6e1 560 SMART SM00091 17 83 1.4E-5 T 31-10-2018 IPR000014 PAS domain DY252_21680 2b4754e8d1b363b4037a7921739ae6e1 560 Pfam PF00563 EAL domain 317 545 2.9E-58 T 31-10-2018 IPR001633 EAL domain DY252_21680 2b4754e8d1b363b4037a7921739ae6e1 560 Gene3D G3DSA:3.20.20.450 309 556 4.4E-69 T 31-10-2018 IPR035919 EAL domain superfamily DY252_21680 2b4754e8d1b363b4037a7921739ae6e1 560 SUPERFAMILY SSF55785 6 94 1.31E-9 T 31-10-2018 IPR035965 PAS domain superfamily DY252_22000 5b04b4cd5171a6af05d7f9887c42957b 106 Gene3D G3DSA:3.10.450.50 1 105 4.1E-33 T 31-10-2018 DY252_22000 5b04b4cd5171a6af05d7f9887c42957b 106 Pfam PF12680 SnoaL-like domain 7 102 1.6E-8 T 31-10-2018 IPR037401 SnoaL-like domain DY252_22000 5b04b4cd5171a6af05d7f9887c42957b 106 SUPERFAMILY SSF54427 1 103 3.21E-16 T 31-10-2018 IPR032710 NTF2-like domain superfamily DY252_00755 439ea698356b450ea6bc018c34677084 491 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 138 248 3.5E-15 T 31-10-2018 IPR000014 PAS domain DY252_00755 439ea698356b450ea6bc018c34677084 491 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 126 1.3E-19 T 31-10-2018 IPR000014 PAS domain DY252_00755 439ea698356b450ea6bc018c34677084 491 SMART SM00091 130 200 0.31 T 31-10-2018 IPR000014 PAS domain DY252_00755 439ea698356b450ea6bc018c34677084 491 SMART SM00091 9 78 0.011 T 31-10-2018 IPR000014 PAS domain DY252_00755 439ea698356b450ea6bc018c34677084 491 Gene3D G3DSA:3.30.450.20 117 239 4.7E-23 T 31-10-2018 DY252_00755 439ea698356b450ea6bc018c34677084 491 Gene3D G3DSA:3.30.450.20 6 116 6.7E-24 T 31-10-2018 DY252_00755 439ea698356b450ea6bc018c34677084 491 SMART SM00086 83 125 1.4E-6 T 31-10-2018 IPR001610 PAC motif DY252_00755 439ea698356b450ea6bc018c34677084 491 SMART SM00086 205 247 0.19 T 31-10-2018 IPR001610 PAC motif DY252_00755 439ea698356b450ea6bc018c34677084 491 SUPERFAMILY SSF58104 256 489 3.79E-50 T 31-10-2018 DY252_00755 439ea698356b450ea6bc018c34677084 491 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 477 5.8E-28 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_00755 439ea698356b450ea6bc018c34677084 491 SUPERFAMILY SSF55785 19 122 9.07E-28 T 31-10-2018 IPR035965 PAS domain superfamily DY252_00755 439ea698356b450ea6bc018c34677084 491 SUPERFAMILY SSF55785 143 244 1.45E-24 T 31-10-2018 IPR035965 PAS domain superfamily DY252_00755 439ea698356b450ea6bc018c34677084 491 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 406 1.7E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_00755 439ea698356b450ea6bc018c34677084 491 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 271 300 1.7E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_00755 439ea698356b450ea6bc018c34677084 491 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 348 375 1.7E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_00755 439ea698356b450ea6bc018c34677084 491 Gene3D G3DSA:1.10.287.950 240 491 8.4E-45 T 31-10-2018 DY252_00755 439ea698356b450ea6bc018c34677084 491 SMART SM00283 257 490 9.9E-32 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_00755 439ea698356b450ea6bc018c34677084 491 Pfam PF08447 PAS fold 154 240 8.1E-14 T 31-10-2018 IPR013655 PAS fold-3 GO:0005515 DY252_00755 439ea698356b450ea6bc018c34677084 491 Pfam PF08447 PAS fold 34 117 2.4E-15 T 31-10-2018 IPR013655 PAS fold-3 GO:0005515 DY252_08600 cd16fb11414b1fc2722759e0406db6b8 348 Pfam PF14031 Putative serine dehydratase domain 239 328 3.8E-23 T 31-10-2018 IPR026956 D-serine dehydratase-like domain DY252_08600 cd16fb11414b1fc2722759e0406db6b8 348 Gene3D G3DSA:3.20.20.10 11 222 9.9E-103 T 31-10-2018 IPR029066 PLP-binding barrel DY252_08600 cd16fb11414b1fc2722759e0406db6b8 348 Pfam PF01168 Alanine racemase, N-terminal domain 9 225 2.6E-23 T 31-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DY252_08600 cd16fb11414b1fc2722759e0406db6b8 348 SMART SM01119 239 331 1.1E-34 T 31-10-2018 IPR026956 D-serine dehydratase-like domain DY252_08600 cd16fb11414b1fc2722759e0406db6b8 348 SUPERFAMILY SSF51419 9 227 2.4E-39 T 31-10-2018 IPR029066 PLP-binding barrel DY252_08600 cd16fb11414b1fc2722759e0406db6b8 348 Gene3D G3DSA:2.40.37.20 2 344 9.9E-103 T 31-10-2018 DY252_20725 36dd88bc9e4cf1bb0986b2e7d335e7c0 603 SUPERFAMILY SSF47384 226 307 4.32E-11 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_20725 36dd88bc9e4cf1bb0986b2e7d335e7c0 603 SUPERFAMILY SSF55874 296 455 1.96E-35 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_20725 36dd88bc9e4cf1bb0986b2e7d335e7c0 603 Pfam PF00072 Response regulator receiver domain 482 585 1.4E-6 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_20725 36dd88bc9e4cf1bb0986b2e7d335e7c0 603 SMART SM00387 350 461 3.0E-21 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_20725 36dd88bc9e4cf1bb0986b2e7d335e7c0 603 Pfam PF00512 His Kinase A (phospho-acceptor) domain 241 304 7.0E-7 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_20725 36dd88bc9e4cf1bb0986b2e7d335e7c0 603 Gene3D G3DSA:3.40.50.2300 470 600 2.7E-11 T 31-10-2018 DY252_20725 36dd88bc9e4cf1bb0986b2e7d335e7c0 603 SMART SM00448 480 586 0.0011 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_20725 36dd88bc9e4cf1bb0986b2e7d335e7c0 603 SMART SM00388 241 306 3.0E-8 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_20725 36dd88bc9e4cf1bb0986b2e7d335e7c0 603 Gene3D G3DSA:3.30.565.10 303 457 3.1E-34 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_20725 36dd88bc9e4cf1bb0986b2e7d335e7c0 603 SUPERFAMILY SSF52172 476 594 1.07E-13 T 31-10-2018 IPR011006 CheY-like superfamily DY252_20725 36dd88bc9e4cf1bb0986b2e7d335e7c0 603 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 455 3.9E-19 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_20725 36dd88bc9e4cf1bb0986b2e7d335e7c0 603 Gene3D G3DSA:1.10.287.130 205 302 6.8E-13 T 31-10-2018 DY252_20725 36dd88bc9e4cf1bb0986b2e7d335e7c0 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 2.3E-8 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_20725 36dd88bc9e4cf1bb0986b2e7d335e7c0 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 2.3E-8 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_20725 36dd88bc9e4cf1bb0986b2e7d335e7c0 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 2.3E-8 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_20725 36dd88bc9e4cf1bb0986b2e7d335e7c0 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 2.3E-8 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_11250 5e20d4c703b1008faa9cc38529214989 543 SMART SM00267 355 535 3.4E-46 T 31-10-2018 IPR000160 GGDEF domain DY252_11250 5e20d4c703b1008faa9cc38529214989 543 Pfam PF00989 PAS fold 20 113 2.0E-5 T 31-10-2018 IPR013767 PAS fold GO:0006355 DY252_11250 5e20d4c703b1008faa9cc38529214989 543 Pfam PF00990 Diguanylate cyclase, GGDEF domain 366 531 2.7E-39 T 31-10-2018 IPR000160 GGDEF domain DY252_11250 5e20d4c703b1008faa9cc38529214989 543 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 362 533 2.8E-40 T 31-10-2018 IPR000160 GGDEF domain DY252_11250 5e20d4c703b1008faa9cc38529214989 543 SUPERFAMILY SSF55785 19 112 3.66E-6 T 31-10-2018 IPR035965 PAS domain superfamily DY252_11250 5e20d4c703b1008faa9cc38529214989 543 SUPERFAMILY SSF55073 371 534 1.8E-38 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_11250 5e20d4c703b1008faa9cc38529214989 543 Gene3D G3DSA:3.30.70.270 363 539 2.0E-46 T 31-10-2018 DY252_11250 5e20d4c703b1008faa9cc38529214989 543 Pfam PF13426 PAS domain 139 236 0.11 T 31-10-2018 IPR000014 PAS domain DY252_11250 5e20d4c703b1008faa9cc38529214989 543 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 136 246 2.1E-8 T 31-10-2018 IPR000014 PAS domain DY252_11250 5e20d4c703b1008faa9cc38529214989 543 Gene3D G3DSA:3.30.450.20 125 251 8.1E-7 T 31-10-2018 DY252_11250 5e20d4c703b1008faa9cc38529214989 543 Gene3D G3DSA:3.30.450.20 6 117 3.7E-6 T 31-10-2018 DY252_11250 5e20d4c703b1008faa9cc38529214989 543 Gene3D G3DSA:3.30.450.20 252 362 5.5E-5 T 31-10-2018 DY252_11250 5e20d4c703b1008faa9cc38529214989 543 SUPERFAMILY SSF55785 138 246 3.32E-8 T 31-10-2018 IPR035965 PAS domain superfamily DY252_11355 929138abde80498bcae878bb9fc106b5 794 Gene3D G3DSA:3.30.230.10 536 768 1.3E-88 T 31-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DY252_11355 929138abde80498bcae878bb9fc106b5 794 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 671 690 3.8E-5 T 31-10-2018 DY252_11355 929138abde80498bcae878bb9fc106b5 794 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 701 719 3.8E-5 T 31-10-2018 DY252_11355 929138abde80498bcae878bb9fc106b5 794 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 641 660 3.8E-5 T 31-10-2018 DY252_11355 929138abde80498bcae878bb9fc106b5 794 SUPERFAMILY SSF54211 559 752 5.31E-34 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_11355 929138abde80498bcae878bb9fc106b5 794 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 644 748 4.8E-9 T 31-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DY252_11355 929138abde80498bcae878bb9fc106b5 794 Pfam PF13654 AAA domain 30 534 2.4E-133 T 31-10-2018 DY252_11355 929138abde80498bcae878bb9fc106b5 794 Gene3D G3DSA:3.40.50.300 17 179 1.2E-21 T 31-10-2018 DY252_11355 929138abde80498bcae878bb9fc106b5 794 Gene3D G3DSA:3.40.50.300 220 447 2.5E-51 T 31-10-2018 DY252_11715 5ba1fb2849e419c077612d42353cc4ac 313 SUPERFAMILY SSF53850 92 296 3.26E-42 T 31-10-2018 DY252_11715 5ba1fb2849e419c077612d42353cc4ac 313 SUPERFAMILY SSF46785 7 91 1.56E-21 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_11715 5ba1fb2849e419c077612d42353cc4ac 313 Gene3D G3DSA:1.10.10.10 6 94 7.4E-27 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_11715 5ba1fb2849e419c077612d42353cc4ac 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 6.0E-20 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_11715 5ba1fb2849e419c077612d42353cc4ac 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.2E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_11715 5ba1fb2849e419c077612d42353cc4ac 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.2E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_11715 5ba1fb2849e419c077612d42353cc4ac 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.2E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_11715 5ba1fb2849e419c077612d42353cc4ac 313 Gene3D G3DSA:3.40.190.290 95 292 1.1E-49 T 31-10-2018 DY252_11715 5ba1fb2849e419c077612d42353cc4ac 313 Pfam PF03466 LysR substrate binding domain 92 293 1.5E-38 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_00230 a341b44ea15d3d7be54d479d506045f3 495 Pfam PF00005 ABC transporter 272 424 9.3E-20 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_00230 a341b44ea15d3d7be54d479d506045f3 495 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_00230 a341b44ea15d3d7be54d479d506045f3 495 SUPERFAMILY SSF52540 245 484 3.37E-44 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_00230 a341b44ea15d3d7be54d479d506045f3 495 SMART SM00382 30 225 1.5E-8 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_00230 a341b44ea15d3d7be54d479d506045f3 495 SMART SM00382 279 473 8.7E-7 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_00230 a341b44ea15d3d7be54d479d506045f3 495 Pfam PF00005 ABC transporter 21 171 6.3E-29 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_00230 a341b44ea15d3d7be54d479d506045f3 495 Gene3D G3DSA:3.40.50.300 266 493 5.0E-41 T 31-10-2018 DY252_00230 a341b44ea15d3d7be54d479d506045f3 495 SUPERFAMILY SSF52540 4 232 1.17E-57 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_00230 a341b44ea15d3d7be54d479d506045f3 495 Gene3D G3DSA:3.40.50.300 1 250 1.7E-56 T 31-10-2018 DY252_12735 47cd9cf681cefdfded630a6107fc7d0d 274 Gene3D G3DSA:3.40.190.80 152 270 1.8E-14 T 31-10-2018 DY252_12735 47cd9cf681cefdfded630a6107fc7d0d 274 Pfam PF00459 Inositol monophosphatase family 18 245 1.5E-38 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_12735 47cd9cf681cefdfded630a6107fc7d0d 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 1.7E-6 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_12735 47cd9cf681cefdfded630a6107fc7d0d 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 92 108 1.7E-6 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_12735 47cd9cf681cefdfded630a6107fc7d0d 274 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 92 105 - T 31-10-2018 IPR020583 Inositol monophosphatase, metal-binding site DY252_12735 47cd9cf681cefdfded630a6107fc7d0d 274 SUPERFAMILY SSF56655 16 269 6.02E-50 T 31-10-2018 DY252_12735 47cd9cf681cefdfded630a6107fc7d0d 274 Gene3D G3DSA:3.30.540.10 2 151 2.1E-30 T 31-10-2018 DY252_14560 b3cbff3fba920569ab9b3d12a12e27c7 431 SUPERFAMILY SSF53474 106 316 5.81E-18 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_14560 b3cbff3fba920569ab9b3d12a12e27c7 431 Gene3D G3DSA:3.40.50.1820 99 318 1.4E-25 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_05130 bf9c2bd74b63dba326bc49f76821af8c 264 Gene3D G3DSA:3.40.50.300 1 256 1.1E-53 T 31-10-2018 DY252_05130 bf9c2bd74b63dba326bc49f76821af8c 264 Pfam PF00005 ABC transporter 28 185 1.8E-29 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_05130 bf9c2bd74b63dba326bc49f76821af8c 264 SUPERFAMILY SSF52540 10 243 6.57E-55 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_05130 bf9c2bd74b63dba326bc49f76821af8c 264 SMART SM00382 36 241 1.8E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_20215 3a71d01b3db120a4ac75976bd6a3bf90 296 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 282 295 - T 31-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20215 3a71d01b3db120a4ac75976bd6a3bf90 296 Gene3D G3DSA:1.10.287.80 6 292 2.9E-99 T 31-10-2018 DY252_20215 3a71d01b3db120a4ac75976bd6a3bf90 296 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 296 34.812 T 31-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20215 3a71d01b3db120a4ac75976bd6a3bf90 296 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 296 7.9E-109 T 31-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20215 3a71d01b3db120a4ac75976bd6a3bf90 296 PRINTS PR00126 ATP synthase gamma subunit signature 76 95 7.7E-34 T 31-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20215 3a71d01b3db120a4ac75976bd6a3bf90 296 PRINTS PR00126 ATP synthase gamma subunit signature 274 295 7.7E-34 T 31-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20215 3a71d01b3db120a4ac75976bd6a3bf90 296 PRINTS PR00126 ATP synthase gamma subunit signature 243 262 7.7E-34 T 31-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20215 3a71d01b3db120a4ac75976bd6a3bf90 296 PRINTS PR00126 ATP synthase gamma subunit signature 172 189 7.7E-34 T 31-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20215 3a71d01b3db120a4ac75976bd6a3bf90 296 Gene3D G3DSA:3.40.1380.10 61 215 2.9E-99 T 31-10-2018 DY252_20215 3a71d01b3db120a4ac75976bd6a3bf90 296 SUPERFAMILY SSF52943 2 296 6.54E-91 T 31-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20215 3a71d01b3db120a4ac75976bd6a3bf90 296 PIRSF PIRSF039089 1 296 6.2E-106 T 31-10-2018 DY252_20215 3a71d01b3db120a4ac75976bd6a3bf90 296 Pfam PF00231 ATP synthase 3 296 4.1E-101 T 31-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_03010 3e1ac629a662a83da5499bc037887476 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 225 5.6E-25 T 31-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DY252_03010 3e1ac629a662a83da5499bc037887476 390 Gene3D G3DSA:1.20.140.10 242 386 7.6E-47 T 31-10-2018 DY252_03010 3e1ac629a662a83da5499bc037887476 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 237 385 9.9E-43 T 31-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DY252_03010 3e1ac629a662a83da5499bc037887476 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 31-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DY252_03010 3e1ac629a662a83da5499bc037887476 390 SUPERFAMILY SSF56645 4 250 7.33E-85 T 31-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DY252_03010 3e1ac629a662a83da5499bc037887476 390 Gene3D G3DSA:1.10.540.10 4 128 1.3E-47 T 31-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DY252_03010 3e1ac629a662a83da5499bc037887476 390 Gene3D G3DSA:2.40.110.10 129 241 1.4E-44 T 31-10-2018 DY252_03010 3e1ac629a662a83da5499bc037887476 390 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 132 144 - T 31-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DY252_03010 3e1ac629a662a83da5499bc037887476 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 126 2.0E-37 T 31-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DY252_03010 3e1ac629a662a83da5499bc037887476 390 SUPERFAMILY SSF47203 236 388 1.08E-46 T 31-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DY252_03010 3e1ac629a662a83da5499bc037887476 390 PIRSF PIRSF016578 138 390 8.8E-11 T 31-10-2018 DY252_03010 3e1ac629a662a83da5499bc037887476 390 PIRSF PIRSF016578 14 116 0.0037 T 31-10-2018 DY252_11330 425200f6f750e62f169d5d650f17cffe 578 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 402 562 1.7E-40 T 31-10-2018 IPR000160 GGDEF domain DY252_11330 425200f6f750e62f169d5d650f17cffe 578 SUPERFAMILY SSF55785 126 243 7.33E-15 T 31-10-2018 IPR035965 PAS domain superfamily DY252_11330 425200f6f750e62f169d5d650f17cffe 578 Pfam PF13426 PAS domain 152 244 9.6E-7 T 31-10-2018 IPR000014 PAS domain DY252_11330 425200f6f750e62f169d5d650f17cffe 578 Pfam PF00990 Diguanylate cyclase, GGDEF domain 404 560 5.5E-41 T 31-10-2018 IPR000160 GGDEF domain DY252_11330 425200f6f750e62f169d5d650f17cffe 578 Gene3D G3DSA:3.30.70.270 391 565 4.0E-48 T 31-10-2018 DY252_11330 425200f6f750e62f169d5d650f17cffe 578 SUPERFAMILY SSF55781 282 399 2.62E-5 T 31-10-2018 DY252_11330 425200f6f750e62f169d5d650f17cffe 578 Gene3D G3DSA:3.30.450.20 125 251 5.9E-16 T 31-10-2018 DY252_11330 425200f6f750e62f169d5d650f17cffe 578 SMART SM00267 393 565 1.7E-49 T 31-10-2018 IPR000160 GGDEF domain DY252_11330 425200f6f750e62f169d5d650f17cffe 578 SMART SM00091 136 203 0.0072 T 31-10-2018 IPR000014 PAS domain DY252_11330 425200f6f750e62f169d5d650f17cffe 578 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 134 251 2.3E-12 T 31-10-2018 IPR000014 PAS domain DY252_11330 425200f6f750e62f169d5d650f17cffe 578 SUPERFAMILY SSF55073 408 562 2.2E-42 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_00900 5f2519643362bc3339878f002a7052d7 206 Pfam PF06042 Nucleotidyltransferase 35 198 2.2E-39 T 31-10-2018 IPR009267 Putative nucleotidyltransferase DY252_08395 efed4e35dbb4c3f23171c30f89955899 381 Gene3D G3DSA:3.90.1150.10 49 373 1.0E-48 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_08395 efed4e35dbb4c3f23171c30f89955899 381 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 238 251 - T 31-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DY252_08395 efed4e35dbb4c3f23171c30f89955899 381 Pfam PF00155 Aminotransferase class I and II 83 347 3.4E-30 T 31-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DY252_08395 efed4e35dbb4c3f23171c30f89955899 381 SUPERFAMILY SSF53383 28 376 1.5E-53 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_08395 efed4e35dbb4c3f23171c30f89955899 381 Gene3D G3DSA:3.40.640.10 61 286 1.0E-48 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_08395 efed4e35dbb4c3f23171c30f89955899 381 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 31 373 9.5E-93 T 31-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 DY252_02075 3eb96252efe13aad7a94681557aae5cb 555 Gene3D G3DSA:3.40.50.970 362 546 5.6E-59 T 31-10-2018 DY252_02075 3eb96252efe13aad7a94681557aae5cb 555 SUPERFAMILY SSF52467 160 356 4.09E-36 T 31-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DY252_02075 3eb96252efe13aad7a94681557aae5cb 555 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 176 7.4E-52 T 31-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DY252_02075 3eb96252efe13aad7a94681557aae5cb 555 SUPERFAMILY SSF52518 366 545 1.09E-59 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_02075 3eb96252efe13aad7a94681557aae5cb 555 SUPERFAMILY SSF52518 5 183 2.63E-52 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_02075 3eb96252efe13aad7a94681557aae5cb 555 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 425 444 - T 31-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DY252_02075 3eb96252efe13aad7a94681557aae5cb 555 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 331 2.5E-29 T 31-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DY252_02075 3eb96252efe13aad7a94681557aae5cb 555 Gene3D G3DSA:3.40.50.1220 190 355 2.1E-37 T 31-10-2018 DY252_02075 3eb96252efe13aad7a94681557aae5cb 555 Gene3D G3DSA:3.40.50.970 2 189 3.4E-59 T 31-10-2018 DY252_02075 3eb96252efe13aad7a94681557aae5cb 555 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 389 535 1.4E-40 T 31-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DY252_05665 5547860af26167616c7d75d12c290c93 390 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 107 273 3.5E-22 T 31-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain DY252_05665 5547860af26167616c7d75d12c290c93 390 Pfam PF17482 Phage tail sheath C-terminal domain 274 376 2.6E-15 T 31-10-2018 IPR020287 Tail sheath protein, C-terminal domain DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 14 289 2.5E-54 T 31-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 568 632 1.0E-14 T 31-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 Gene3D G3DSA:1.10.10.1100 429 483 1.8E-7 T 31-10-2018 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 15 804 2.7E-295 T 31-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 Gene3D G3DSA:3.30.413.10 640 803 5.2E-37 T 31-10-2018 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 688 704 - T 31-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 SUPERFAMILY SSF56014 642 809 4.84E-52 T 31-10-2018 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 Gene3D G3DSA:3.50.50.60 16 289 4.8E-91 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 Gene3D G3DSA:3.30.390.30 325 400 8.5E-8 T 31-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 281 288 9.2E-11 T 31-10-2018 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 242 256 9.2E-11 T 31-10-2018 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 9.2E-11 T 31-10-2018 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 181 9.2E-11 T 31-10-2018 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 15 34 9.8E-21 T 31-10-2018 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 9.8E-21 T 31-10-2018 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 9.8E-21 T 31-10-2018 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 9.8E-21 T 31-10-2018 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 9.8E-21 T 31-10-2018 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 SUPERFAMILY SSF51905 11 199 1.3E-43 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 Gene3D G3DSA:3.50.50.60 119 253 4.8E-91 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 PRINTS PR00397 Sirohaem Fe-binding site signature 688 706 1.1E-5 T 31-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 PRINTS PR00397 Sirohaem Fe-binding site signature 645 663 1.1E-5 T 31-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 SUPERFAMILY SSF51905 157 313 1.99E-27 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 641 779 2.5E-25 T 31-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 Pfam PF04324 BFD-like [2Fe-2S] binding domain 492 542 1.4E-11 T 31-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 Pfam PF04324 BFD-like [2Fe-2S] binding domain 430 478 9.0E-13 T 31-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 SUPERFAMILY SSF55124 529 650 1.64E-26 T 31-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DY252_06165 19363de53930b38ca8e175cc5d68a0fc 823 PIRSF PIRSF037149 7 823 0.0 T 31-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 DY252_03075 d6b230e7e2748db80325b8300c688076 224 Pfam PF14436 Bacterial EndoU nuclease 83 223 3.2E-17 T 31-10-2018 IPR029501 Bacterial EndoU nuclease DY252_06495 d5126f5a65ff9a12930a6b0c46012eb4 572 SUPERFAMILY SSF56519 73 210 6.54E-33 T 31-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DY252_06495 d5126f5a65ff9a12930a6b0c46012eb4 572 SUPERFAMILY SSF56601 212 544 8.16E-83 T 31-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DY252_06495 d5126f5a65ff9a12930a6b0c46012eb4 572 Pfam PF00905 Penicillin binding protein transpeptidase domain 239 519 3.4E-56 T 31-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DY252_06495 d5126f5a65ff9a12930a6b0c46012eb4 572 Gene3D G3DSA:3.40.710.10 273 452 1.8E-89 T 31-10-2018 DY252_06495 d5126f5a65ff9a12930a6b0c46012eb4 572 Gene3D G3DSA:3.30.450.330 213 538 1.8E-89 T 31-10-2018 DY252_06495 d5126f5a65ff9a12930a6b0c46012eb4 572 Pfam PF03717 Penicillin-binding Protein dimerisation domain 76 184 4.3E-11 T 31-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DY252_21505 a3900e375f68fa5eeb32a765b51c3e3b 147 PIRSF PIRSF000027 2 147 9.5E-31 T 31-10-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 DY252_21505 a3900e375f68fa5eeb32a765b51c3e3b 147 Pfam PF01322 Cytochrome C' 26 146 6.9E-30 T 31-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 DY252_21505 a3900e375f68fa5eeb32a765b51c3e3b 147 Gene3D G3DSA:1.20.120.10 22 147 3.1E-36 T 31-10-2018 DY252_21505 a3900e375f68fa5eeb32a765b51c3e3b 147 SUPERFAMILY SSF47175 25 146 1.47E-32 T 31-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 DY252_08205 324e78bb02610c44976995b897706786 324 Pfam PF12833 Helix-turn-helix domain 229 307 4.3E-19 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_08205 324e78bb02610c44976995b897706786 324 Gene3D G3DSA:1.10.10.60 206 320 2.0E-24 T 31-10-2018 DY252_08205 324e78bb02610c44976995b897706786 324 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 290 306 4.0E-6 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_08205 324e78bb02610c44976995b897706786 324 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 275 290 4.0E-6 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_08205 324e78bb02610c44976995b897706786 324 SMART SM00342 223 306 1.2E-23 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_08205 324e78bb02610c44976995b897706786 324 SUPERFAMILY SSF46689 261 307 1.66E-11 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_02445 646c7b18082d6626991a6585f064affc 352 Pfam PF00814 Glycoprotease family 23 314 1.3E-97 T 31-10-2018 IPR000905 Gcp-like domain DY252_02445 646c7b18082d6626991a6585f064affc 352 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 338 63.608 T 31-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 DY252_02445 646c7b18082d6626991a6585f064affc 352 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 320 8.5E-129 T 31-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 DY252_02445 646c7b18082d6626991a6585f064affc 352 Gene3D G3DSA:3.30.420.40 128 300 2.9E-123 T 31-10-2018 DY252_02445 646c7b18082d6626991a6585f064affc 352 Gene3D G3DSA:3.30.420.40 3 321 2.9E-123 T 31-10-2018 DY252_02445 646c7b18082d6626991a6585f064affc 352 SUPERFAMILY SSF53067 1 318 1.31E-44 T 31-10-2018 DY252_02445 646c7b18082d6626991a6585f064affc 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 2.7E-44 T 31-10-2018 IPR017861 Kae1/TsaD family DY252_02445 646c7b18082d6626991a6585f064affc 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 2.7E-44 T 31-10-2018 IPR017861 Kae1/TsaD family DY252_02445 646c7b18082d6626991a6585f064affc 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 270 279 2.7E-44 T 31-10-2018 IPR017861 Kae1/TsaD family DY252_02445 646c7b18082d6626991a6585f064affc 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 2.7E-44 T 31-10-2018 IPR017861 Kae1/TsaD family DY252_02445 646c7b18082d6626991a6585f064affc 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 130 142 2.7E-44 T 31-10-2018 IPR017861 Kae1/TsaD family DY252_02445 646c7b18082d6626991a6585f064affc 352 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 153 174 2.7E-44 T 31-10-2018 IPR017861 Kae1/TsaD family DY252_02445 646c7b18082d6626991a6585f064affc 352 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 313 2.1E-101 T 31-10-2018 IPR017861 Kae1/TsaD family DY252_06560 c1210c0a6cda03515a40f93e62e24677 245 Gene3D G3DSA:1.10.3680.10 45 163 4.7E-18 T 31-10-2018 IPR029024 TerB-like DY252_06560 c1210c0a6cda03515a40f93e62e24677 245 Pfam PF05099 Tellurite resistance protein TerB 42 168 9.5E-33 T 31-10-2018 IPR007791 Co-chaperone DjlA, N-terminal DY252_06560 c1210c0a6cda03515a40f93e62e24677 245 SUPERFAMILY SSF158682 46 193 6.8E-28 T 31-10-2018 IPR029024 TerB-like DY252_06560 c1210c0a6cda03515a40f93e62e24677 245 SUPERFAMILY SSF46565 170 240 6.58E-16 T 31-10-2018 IPR036869 Chaperone J-domain superfamily DY252_06560 c1210c0a6cda03515a40f93e62e24677 245 Gene3D G3DSA:1.10.287.110 164 243 1.7E-12 T 31-10-2018 IPR036869 Chaperone J-domain superfamily DY252_06560 c1210c0a6cda03515a40f93e62e24677 245 Pfam PF00226 DnaJ domain 179 240 1.5E-9 T 31-10-2018 IPR001623 DnaJ domain DY252_06560 c1210c0a6cda03515a40f93e62e24677 245 SMART SM00271 178 243 3.6E-14 T 31-10-2018 IPR001623 DnaJ domain DY252_06560 c1210c0a6cda03515a40f93e62e24677 245 PRINTS PR00625 DnaJ domain signature 199 214 6.6E-7 T 31-10-2018 IPR001623 DnaJ domain DY252_06560 c1210c0a6cda03515a40f93e62e24677 245 PRINTS PR00625 DnaJ domain signature 223 243 6.6E-7 T 31-10-2018 IPR001623 DnaJ domain DY252_06560 c1210c0a6cda03515a40f93e62e24677 245 PRINTS PR00625 DnaJ domain signature 181 199 6.6E-7 T 31-10-2018 IPR001623 DnaJ domain DY252_03325 3070a76859d38ecd84938d210d827d97 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.3E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_03325 3070a76859d38ecd84938d210d827d97 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.3E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_03325 3070a76859d38ecd84938d210d827d97 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.3E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_03325 3070a76859d38ecd84938d210d827d97 294 Gene3D G3DSA:3.40.190.290 92 289 8.8E-60 T 31-10-2018 DY252_03325 3070a76859d38ecd84938d210d827d97 294 SUPERFAMILY SSF53850 90 292 2.71E-45 T 31-10-2018 DY252_03325 3070a76859d38ecd84938d210d827d97 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 9.5E-19 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_03325 3070a76859d38ecd84938d210d827d97 294 SUPERFAMILY SSF46785 5 86 7.55E-23 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_03325 3070a76859d38ecd84938d210d827d97 294 Pfam PF03466 LysR substrate binding domain 89 289 8.0E-44 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_03325 3070a76859d38ecd84938d210d827d97 294 Gene3D G3DSA:1.10.10.10 3 89 5.0E-28 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_10150 44fa6e45580c18ed042819edb73ce323 265 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 5 259 6.2E-89 T 31-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_10150 44fa6e45580c18ed042819edb73ce323 265 SUPERFAMILY SSF53613 2 262 3.59E-79 T 31-10-2018 IPR029056 Ribokinase-like DY252_10150 44fa6e45580c18ed042819edb73ce323 265 Gene3D G3DSA:3.40.1190.20 2 264 1.4E-100 T 31-10-2018 IPR029056 Ribokinase-like DY252_10150 44fa6e45580c18ed042819edb73ce323 265 Pfam PF08543 Phosphomethylpyrimidine kinase 12 258 3.3E-89 T 31-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DY252_07380 adb424d4f39425d04119f3dc222023f1 194 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 168 4.7E-33 T 31-10-2018 IPR023635 Peptide deformylase DY252_07380 adb424d4f39425d04119f3dc222023f1 194 PIRSF PIRSF004749 1 188 5.3E-52 T 31-10-2018 IPR023635 Peptide deformylase DY252_07380 adb424d4f39425d04119f3dc222023f1 194 SUPERFAMILY SSF56420 1 171 1.44E-53 T 31-10-2018 IPR036821 Peptide deformylase superfamily DY252_07380 adb424d4f39425d04119f3dc222023f1 194 Pfam PF01327 Polypeptide deformylase 4 161 1.3E-46 T 31-10-2018 IPR023635 Peptide deformylase DY252_07380 adb424d4f39425d04119f3dc222023f1 194 Gene3D G3DSA:3.90.45.10 1 178 2.9E-59 T 31-10-2018 IPR036821 Peptide deformylase superfamily DY252_07380 adb424d4f39425d04119f3dc222023f1 194 Hamap MF_00163 Peptide deformylase [def]. 2 173 26.834 T 31-10-2018 IPR023635 Peptide deformylase DY252_07380 adb424d4f39425d04119f3dc222023f1 194 PRINTS PR01576 Peptide deformylase signature 112 130 5.7E-26 T 31-10-2018 IPR023635 Peptide deformylase DY252_07380 adb424d4f39425d04119f3dc222023f1 194 PRINTS PR01576 Peptide deformylase signature 131 160 5.7E-26 T 31-10-2018 IPR023635 Peptide deformylase DY252_07380 adb424d4f39425d04119f3dc222023f1 194 PRINTS PR01576 Peptide deformylase signature 34 63 5.7E-26 T 31-10-2018 IPR023635 Peptide deformylase DY252_07380 adb424d4f39425d04119f3dc222023f1 194 PRINTS PR01576 Peptide deformylase signature 100 111 5.7E-26 T 31-10-2018 IPR023635 Peptide deformylase DY252_07570 cf18f293bb1623f6033dcd0f64bbcb97 199 Pfam PF06821 Serine hydrolase 4 170 1.6E-59 T 31-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 DY252_07570 cf18f293bb1623f6033dcd0f64bbcb97 199 SUPERFAMILY SSF53474 4 167 5.1E-30 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_07570 cf18f293bb1623f6033dcd0f64bbcb97 199 Gene3D G3DSA:3.40.50.1820 1 179 5.5E-46 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_08095 e13fddf097aa47c7e4ae40bdbbe77f33 305 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 257 299 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_08095 e13fddf097aa47c7e4ae40bdbbe77f33 305 Pfam PF01965 DJ-1/PfpI family 31 164 8.6E-7 T 31-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DY252_08095 e13fddf097aa47c7e4ae40bdbbe77f33 305 SUPERFAMILY SSF52317 2 181 1.21E-33 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_08095 e13fddf097aa47c7e4ae40bdbbe77f33 305 SUPERFAMILY SSF46689 256 304 1.66E-12 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_08095 e13fddf097aa47c7e4ae40bdbbe77f33 305 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 287 303 1.1E-6 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_08095 e13fddf097aa47c7e4ae40bdbbe77f33 305 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 287 1.1E-6 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_08095 e13fddf097aa47c7e4ae40bdbbe77f33 305 Gene3D G3DSA:1.10.10.60 200 305 9.3E-30 T 31-10-2018 DY252_08095 e13fddf097aa47c7e4ae40bdbbe77f33 305 SMART SM00342 220 303 1.5E-26 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_08095 e13fddf097aa47c7e4ae40bdbbe77f33 305 Gene3D G3DSA:3.40.50.880 1 188 5.3E-40 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_08095 e13fddf097aa47c7e4ae40bdbbe77f33 305 Pfam PF12833 Helix-turn-helix domain 226 303 2.0E-24 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_05265 a972853f926063e8f8a18364ad31c071 496 SMART SM00091 137 205 4.7 T 31-10-2018 IPR000014 PAS domain DY252_05265 a972853f926063e8f8a18364ad31c071 496 SMART SM00091 13 83 1.6 T 31-10-2018 IPR000014 PAS domain DY252_05265 a972853f926063e8f8a18364ad31c071 496 SUPERFAMILY SSF55785 26 133 5.41E-23 T 31-10-2018 IPR035965 PAS domain superfamily DY252_05265 a972853f926063e8f8a18364ad31c071 496 SUPERFAMILY SSF58104 164 491 2.09E-49 T 31-10-2018 DY252_05265 a972853f926063e8f8a18364ad31c071 496 Pfam PF08448 PAS fold 22 131 1.2E-12 T 31-10-2018 IPR013656 PAS fold-4 DY252_05265 a972853f926063e8f8a18364ad31c071 496 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 481 6.9E-30 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_05265 a972853f926063e8f8a18364ad31c071 496 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 430 459 1.4E-23 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_05265 a972853f926063e8f8a18364ad31c071 496 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 382 411 1.4E-23 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_05265 a972853f926063e8f8a18364ad31c071 496 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 276 305 1.4E-23 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_05265 a972853f926063e8f8a18364ad31c071 496 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 353 380 1.4E-23 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_05265 a972853f926063e8f8a18364ad31c071 496 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 133 4.0E-15 T 31-10-2018 IPR000014 PAS domain DY252_05265 a972853f926063e8f8a18364ad31c071 496 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 144 255 1.0E-16 T 31-10-2018 IPR000014 PAS domain DY252_05265 a972853f926063e8f8a18364ad31c071 496 Gene3D G3DSA:3.30.450.20 5 122 7.7E-18 T 31-10-2018 DY252_05265 a972853f926063e8f8a18364ad31c071 496 Pfam PF08447 PAS fold 160 245 9.6E-13 T 31-10-2018 IPR013655 PAS fold-3 GO:0005515 DY252_05265 a972853f926063e8f8a18364ad31c071 496 Gene3D G3DSA:3.30.450.20 123 243 2.4E-22 T 31-10-2018 DY252_05265 a972853f926063e8f8a18364ad31c071 496 SMART SM00283 248 495 7.0E-33 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_05265 a972853f926063e8f8a18364ad31c071 496 SMART SM00086 88 130 0.056 T 31-10-2018 IPR001610 PAC motif DY252_05265 a972853f926063e8f8a18364ad31c071 496 SMART SM00086 210 252 0.0047 T 31-10-2018 IPR001610 PAC motif DY252_05265 a972853f926063e8f8a18364ad31c071 496 Gene3D G3DSA:1.10.287.950 244 495 1.7E-46 T 31-10-2018 DY252_05265 a972853f926063e8f8a18364ad31c071 496 SUPERFAMILY SSF55785 148 254 8.72E-25 T 31-10-2018 IPR035965 PAS domain superfamily DY252_10105 fd32d7f1d7bb28534e9f2ef1f88af419 350 Pfam PF13174 Tetratricopeptide repeat 300 330 1.0E-4 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_10105 fd32d7f1d7bb28534e9f2ef1f88af419 350 Pfam PF13432 Tetratricopeptide repeat 234 286 8.6E-9 T 31-10-2018 DY252_10105 fd32d7f1d7bb28534e9f2ef1f88af419 350 Gene3D G3DSA:1.25.40.10 224 345 1.2E-27 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_10105 fd32d7f1d7bb28534e9f2ef1f88af419 350 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 13 344 19.572 T 31-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 DY252_10105 fd32d7f1d7bb28534e9f2ef1f88af419 350 SUPERFAMILY SSF48452 222 339 2.53E-13 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_10105 fd32d7f1d7bb28534e9f2ef1f88af419 350 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 224 340 1.5E-37 T 31-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal DY252_10105 fd32d7f1d7bb28534e9f2ef1f88af419 350 Pfam PF16331 TolA binding protein trimerisation 87 141 1.1E-8 T 31-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 DY252_13355 36f3b15ca963787e86897fce39037bc6 246 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 243 3.5E-83 T 31-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DY252_13355 36f3b15ca963787e86897fce39037bc6 246 Gene3D G3DSA:3.40.1180.10 5 245 4.4E-99 T 31-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 DY252_13355 36f3b15ca963787e86897fce39037bc6 246 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 244 41.847 T 31-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DY252_13355 36f3b15ca963787e86897fce39037bc6 246 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 243 3.8E-88 T 31-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DY252_13355 36f3b15ca963787e86897fce39037bc6 246 SUPERFAMILY SSF64005 16 238 3.01E-89 T 31-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 DY252_13355 36f3b15ca963787e86897fce39037bc6 246 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 189 206 - T 31-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 SUPERFAMILY SSF82693 137 332 1.62E-26 T 31-10-2018 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 Gene3D G3DSA:3.30.70.1440 680 877 0.0 T 31-10-2018 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 SUPERFAMILY SSF82866 298 498 6.15E-49 T 31-10-2018 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 Gene3D G3DSA:3.30.70.1430 578 679 0.0 T 31-10-2018 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 SUPERFAMILY SSF82714 733 818 1.83E-21 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1053 0.0 T 31-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 SUPERFAMILY SSF82714 185 274 7.19E-20 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 SUPERFAMILY SSF82866 842 1038 4.71E-44 T 31-10-2018 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 Gene3D G3DSA:3.30.2090.10 181 277 0.0 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 Gene3D G3DSA:3.30.2090.10 732 820 0.0 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 Gene3D G3DSA:3.30.70.1430 40 828 0.0 T 31-10-2018 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 Pfam PF00873 AcrB/AcrD/AcrF family 4 1038 0.0 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 SUPERFAMILY SSF82693 576 682 6.02E-28 T 31-10-2018 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 SUPERFAMILY SSF82693 40 134 4.08E-27 T 31-10-2018 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 6.4E-90 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 PRINTS PR00702 Acriflavin resistance protein family signature 563 580 6.4E-90 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.4E-90 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.4E-90 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 6.4E-90 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 6.4E-90 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 6.4E-90 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 6.4E-90 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 6.4E-90 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 Gene3D G3DSA:3.30.70.1320 135 334 0.0 T 31-10-2018 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 Gene3D G3DSA:1.20.1640.10 524 1034 0.0 T 31-10-2018 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 SUPERFAMILY SSF82693 683 868 4.45E-29 T 31-10-2018 DY252_20815 f9650f1e2fc5d7d77234a49401508de2 1056 Gene3D G3DSA:1.20.1640.10 10 523 0.0 T 31-10-2018 DY252_12830 2696258755af6e1b6249fe90da79a17b 323 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 323 73.027 T 31-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DY252_12830 2696258755af6e1b6249fe90da79a17b 323 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 234 323 4.9E-37 T 31-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DY252_12830 2696258755af6e1b6249fe90da79a17b 323 SUPERFAMILY SSF53901 3 323 1.77E-79 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_12830 2696258755af6e1b6249fe90da79a17b 323 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 323 1.9E-130 T 31-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DY252_12830 2696258755af6e1b6249fe90da79a17b 323 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 190 3.0E-32 T 31-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DY252_12830 2696258755af6e1b6249fe90da79a17b 323 Gene3D G3DSA:3.40.47.10 2 323 2.5E-134 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_02590 15506a45557de78815a9f8257c40f5f5 561 SUPERFAMILY SSF58104 240 554 4.05E-59 T 31-10-2018 DY252_02590 15506a45557de78815a9f8257c40f5f5 561 Gene3D G3DSA:1.10.8.500 213 263 7.5E-12 T 31-10-2018 DY252_02590 15506a45557de78815a9f8257c40f5f5 561 Gene3D G3DSA:3.30.450.20 36 187 4.2E-46 T 31-10-2018 DY252_02590 15506a45557de78815a9f8257c40f5f5 561 SMART SM00304 212 265 8.0E-7 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_02590 15506a45557de78815a9f8257c40f5f5 561 Pfam PF00672 HAMP domain 213 259 9.2E-9 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_02590 15506a45557de78815a9f8257c40f5f5 561 SMART SM00283 301 555 9.0E-50 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_02590 15506a45557de78815a9f8257c40f5f5 561 Pfam PF17200 Single Cache domain 2 38 188 2.1E-39 T 31-10-2018 IPR033480 Single Cache domain 2 DY252_02590 15506a45557de78815a9f8257c40f5f5 561 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 363 520 1.3E-32 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_02590 15506a45557de78815a9f8257c40f5f5 561 SMART SM01049 35 129 5.2E-31 T 31-10-2018 IPR033480 Single Cache domain 2 DY252_02590 15506a45557de78815a9f8257c40f5f5 561 Gene3D G3DSA:1.10.287.950 269 560 6.0E-53 T 31-10-2018 DY252_14685 f3defc9bf1a7251e81806d9f7a79e065 342 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 174 335 1.9E-45 T 31-10-2018 IPR000160 GGDEF domain DY252_14685 f3defc9bf1a7251e81806d9f7a79e065 342 Pfam PF00990 Diguanylate cyclase, GGDEF domain 176 332 2.4E-49 T 31-10-2018 IPR000160 GGDEF domain DY252_14685 f3defc9bf1a7251e81806d9f7a79e065 342 Gene3D G3DSA:3.30.70.270 169 338 3.2E-58 T 31-10-2018 DY252_14685 f3defc9bf1a7251e81806d9f7a79e065 342 SUPERFAMILY SSF55073 181 335 4.55E-48 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_14685 f3defc9bf1a7251e81806d9f7a79e065 342 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 68 167 1.2E-10 T 31-10-2018 IPR000014 PAS domain DY252_14685 f3defc9bf1a7251e81806d9f7a79e065 342 SMART SM00267 165 337 2.1E-61 T 31-10-2018 IPR000160 GGDEF domain DY252_14685 f3defc9bf1a7251e81806d9f7a79e065 342 Pfam PF08447 PAS fold 72 159 1.0E-21 T 31-10-2018 IPR013655 PAS fold-3 GO:0005515 DY252_14685 f3defc9bf1a7251e81806d9f7a79e065 342 SMART SM00086 123 165 4.6E-7 T 31-10-2018 IPR001610 PAC motif DY252_14685 f3defc9bf1a7251e81806d9f7a79e065 342 Gene3D G3DSA:3.30.450.20 44 112 2.1E-21 T 31-10-2018 DY252_14685 f3defc9bf1a7251e81806d9f7a79e065 342 Gene3D G3DSA:2.10.70.100 120 166 2.2E-15 T 31-10-2018 DY252_14685 f3defc9bf1a7251e81806d9f7a79e065 342 SUPERFAMILY SSF55785 59 166 1.19E-22 T 31-10-2018 IPR035965 PAS domain superfamily DY252_13505 21a790645258388b781ba25091e40bde 339 Pfam PF01706 FliG C-terminal domain 222 328 6.3E-40 T 31-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal DY252_13505 21a790645258388b781ba25091e40bde 339 Gene3D G3DSA:1.10.220.30 4 92 5.8E-17 T 31-10-2018 DY252_13505 21a790645258388b781ba25091e40bde 339 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 8 337 1.6E-79 T 31-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DY252_13505 21a790645258388b781ba25091e40bde 339 Pfam PF14841 FliG middle domain 122 193 2.1E-24 T 31-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain DY252_13505 21a790645258388b781ba25091e40bde 339 Gene3D G3DSA:1.10.220.30 201 338 7.3E-42 T 31-10-2018 DY252_13505 21a790645258388b781ba25091e40bde 339 Gene3D G3DSA:1.10.220.30 94 196 6.0E-25 T 31-10-2018 DY252_13505 21a790645258388b781ba25091e40bde 339 SUPERFAMILY SSF48029 121 328 3.4E-60 T 31-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical DY252_13505 21a790645258388b781ba25091e40bde 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 11 27 2.5E-61 T 31-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DY252_13505 21a790645258388b781ba25091e40bde 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 119 142 2.5E-61 T 31-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DY252_13505 21a790645258388b781ba25091e40bde 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 199 224 2.5E-61 T 31-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DY252_13505 21a790645258388b781ba25091e40bde 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 230 250 2.5E-61 T 31-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DY252_13505 21a790645258388b781ba25091e40bde 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 252 272 2.5E-61 T 31-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DY252_13505 21a790645258388b781ba25091e40bde 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 40 66 2.5E-61 T 31-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DY252_13505 21a790645258388b781ba25091e40bde 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 276 302 2.5E-61 T 31-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DY252_13505 21a790645258388b781ba25091e40bde 339 PIRSF PIRSF003161 5 338 7.8E-114 T 31-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DY252_13505 21a790645258388b781ba25091e40bde 339 SUPERFAMILY SSF48029 10 119 1.31E-21 T 31-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical DY252_13505 21a790645258388b781ba25091e40bde 339 Pfam PF14842 FliG N-terminal domain 11 112 1.8E-26 T 31-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain DY252_16710 2c9faa1382498b3903423014ec891abe 812 Pfam PF13426 PAS domain 270 371 1.6E-8 T 31-10-2018 IPR000014 PAS domain DY252_16710 2c9faa1382498b3903423014ec891abe 812 SMART SM00091 259 325 6.2E-4 T 31-10-2018 IPR000014 PAS domain DY252_16710 2c9faa1382498b3903423014ec891abe 812 SMART SM00052 555 800 3.0E-110 T 31-10-2018 IPR001633 EAL domain DY252_16710 2c9faa1382498b3903423014ec891abe 812 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 382 542 3.5E-37 T 31-10-2018 IPR000160 GGDEF domain DY252_16710 2c9faa1382498b3903423014ec891abe 812 SUPERFAMILY SSF141868 562 803 1.44E-79 T 31-10-2018 IPR035919 EAL domain superfamily DY252_16710 2c9faa1382498b3903423014ec891abe 812 Gene3D G3DSA:3.20.20.450 559 806 4.3E-91 T 31-10-2018 IPR035919 EAL domain superfamily DY252_16710 2c9faa1382498b3903423014ec891abe 812 SMART SM00267 373 545 9.4E-62 T 31-10-2018 IPR000160 GGDEF domain DY252_16710 2c9faa1382498b3903423014ec891abe 812 SUPERFAMILY SSF55785 270 380 4.19E-14 T 31-10-2018 IPR035965 PAS domain superfamily DY252_16710 2c9faa1382498b3903423014ec891abe 812 SUPERFAMILY SSF55785 179 252 5.41E-11 T 31-10-2018 IPR035965 PAS domain superfamily DY252_16710 2c9faa1382498b3903423014ec891abe 812 Pfam PF00990 Diguanylate cyclase, GGDEF domain 384 540 4.4E-46 T 31-10-2018 IPR000160 GGDEF domain DY252_16710 2c9faa1382498b3903423014ec891abe 812 SUPERFAMILY SSF55073 389 546 1.51E-47 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_16710 2c9faa1382498b3903423014ec891abe 812 Pfam PF00563 EAL domain 562 795 6.5E-68 T 31-10-2018 IPR001633 EAL domain DY252_16710 2c9faa1382498b3903423014ec891abe 812 Gene3D G3DSA:3.40.50.2300 2 131 2.1E-28 T 31-10-2018 DY252_16710 2c9faa1382498b3903423014ec891abe 812 Gene3D G3DSA:3.30.70.270 383 558 4.6E-57 T 31-10-2018 DY252_16710 2c9faa1382498b3903423014ec891abe 812 SUPERFAMILY SSF52172 3 145 2.85E-29 T 31-10-2018 IPR011006 CheY-like superfamily DY252_16710 2c9faa1382498b3903423014ec891abe 812 Pfam PF00072 Response regulator receiver domain 7 117 1.0E-19 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_16710 2c9faa1382498b3903423014ec891abe 812 SMART SM00448 5 117 3.4E-27 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_16710 2c9faa1382498b3903423014ec891abe 812 Pfam PF08447 PAS fold 171 244 2.1E-10 T 31-10-2018 IPR013655 PAS fold-3 GO:0005515 DY252_16710 2c9faa1382498b3903423014ec891abe 812 Gene3D G3DSA:3.30.450.20 257 382 9.5E-19 T 31-10-2018 DY252_16710 2c9faa1382498b3903423014ec891abe 812 Gene3D G3DSA:3.30.450.20 132 247 1.9E-17 T 31-10-2018 DY252_16710 2c9faa1382498b3903423014ec891abe 812 SMART SM00086 331 373 440.0 T 31-10-2018 IPR001610 PAC motif DY252_16710 2c9faa1382498b3903423014ec891abe 812 SMART SM00086 209 251 1.7E-5 T 31-10-2018 IPR001610 PAC motif DY252_16710 2c9faa1382498b3903423014ec891abe 812 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 263 380 7.0E-7 T 31-10-2018 IPR000014 PAS domain DY252_00275 b7777346ef94412d82682ced2118b752 497 Pfam PF00145 C-5 cytosine-specific DNA methylase 122 493 2.3E-43 T 31-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DY252_00275 b7777346ef94412d82682ced2118b752 497 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 234 247 2.6E-16 T 31-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DY252_00275 b7777346ef94412d82682ced2118b752 497 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 168 182 2.6E-16 T 31-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DY252_00275 b7777346ef94412d82682ced2118b752 497 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 6 22 2.6E-16 T 31-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DY252_00275 b7777346ef94412d82682ced2118b752 497 Gene3D G3DSA:3.40.50.150 4 271 3.4E-49 T 31-10-2018 DY252_00275 b7777346ef94412d82682ced2118b752 497 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 111 491 9.3E-40 T 31-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DY252_00275 b7777346ef94412d82682ced2118b752 497 Gene3D G3DSA:3.90.120.10 380 485 6.4E-23 T 31-10-2018 DY252_00275 b7777346ef94412d82682ced2118b752 497 SUPERFAMILY SSF53335 5 493 2.75E-69 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_13670 51cb20dbcec1567f99e9272e14d66170 102 Pfam PF11625 Protein of unknown function (DUF3253) 16 94 2.0E-12 T 31-10-2018 IPR021660 Protein of unknown function DUF3253 DY252_13670 51cb20dbcec1567f99e9272e14d66170 102 Gene3D G3DSA:1.10.10.10 11 99 3.7E-14 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_13670 51cb20dbcec1567f99e9272e14d66170 102 SUPERFAMILY SSF46785 14 96 3.26E-11 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 PIRSF PIRSF001174 2 772 0.0 T 31-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 200 1.8E-41 T 31-10-2018 IPR003111 Lon, substrate-binding domain DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 568 770 5.6E-95 T 31-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 SUPERFAMILY SSF52540 312 583 4.08E-54 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 TIGRFAM TIGR00763 lon: endopeptidase La 11 769 1.4E-301 T 31-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 Gene3D G3DSA:1.20.58.1480 120 244 1.1E-44 T 31-10-2018 DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 Gene3D G3DSA:2.30.130.40 7 113 4.0E-32 T 31-10-2018 DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 487 5.1E-18 T 31-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 Gene3D G3DSA:1.10.8.60 490 582 1.5E-30 T 31-10-2018 DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 SUPERFAMILY SSF54211 593 769 3.75E-56 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 724 742 1.9E-52 T 31-10-2018 DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 701 720 1.9E-52 T 31-10-2018 DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 671 690 1.9E-52 T 31-10-2018 DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 1.9E-52 T 31-10-2018 DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 593 609 1.9E-52 T 31-10-2018 DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 SMART SM00382 347 499 2.0E-9 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 Hamap MF_01973 Lon protease [lon]. 10 770 72.222 T 31-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 SMART SM00464 9 201 4.3E-75 T 31-10-2018 IPR003111 Lon, substrate-binding domain DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 SUPERFAMILY SSF88697 11 200 5.22E-48 T 31-10-2018 IPR015947 PUA-like superfamily DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 Gene3D G3DSA:3.40.50.300 312 489 3.9E-63 T 31-10-2018 DY252_13530 fe378e8ab7c6feefb62d19ab80a3dcec 803 Gene3D G3DSA:3.30.230.10 583 770 3.4E-79 T 31-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DY252_12690 5e1d2d428f8ce3e9af49f7db355f05bc 120 SMART SM00418 27 105 4.9E-25 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_12690 5e1d2d428f8ce3e9af49f7db355f05bc 120 Gene3D G3DSA:1.10.10.10 7 114 2.5E-26 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_12690 5e1d2d428f8ce3e9af49f7db355f05bc 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 2.1E-13 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_12690 5e1d2d428f8ce3e9af49f7db355f05bc 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 59 2.1E-13 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_12690 5e1d2d428f8ce3e9af49f7db355f05bc 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 76 91 2.1E-13 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_12690 5e1d2d428f8ce3e9af49f7db355f05bc 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 44 2.1E-13 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_12690 5e1d2d428f8ce3e9af49f7db355f05bc 120 SUPERFAMILY SSF46785 24 108 2.73E-25 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_12690 5e1d2d428f8ce3e9af49f7db355f05bc 120 Pfam PF01022 Bacterial regulatory protein, arsR family 35 79 8.2E-14 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_02935 3aade14f2ced6ab77870e24ace0d9900 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.3E-12 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_02935 3aade14f2ced6ab77870e24ace0d9900 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.3E-12 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_02935 3aade14f2ced6ab77870e24ace0d9900 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.3E-12 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_02935 3aade14f2ced6ab77870e24ace0d9900 153 Gene3D G3DSA:1.10.10.10 2 52 5.6E-18 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_02935 3aade14f2ced6ab77870e24ace0d9900 153 SUPERFAMILY SSF46785 1 60 1.96E-14 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_02935 3aade14f2ced6ab77870e24ace0d9900 153 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 2.0E-15 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_02935 3aade14f2ced6ab77870e24ace0d9900 153 Pfam PF01037 Lrp/AsnC ligand binding domain 70 138 1.6E-15 T 31-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DY252_02935 3aade14f2ced6ab77870e24ace0d9900 153 SUPERFAMILY SSF54909 63 147 4.96E-18 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_02935 3aade14f2ced6ab77870e24ace0d9900 153 SMART SM00344 1 108 4.7E-35 T 31-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DY252_02935 3aade14f2ced6ab77870e24ace0d9900 153 Gene3D G3DSA:3.30.70.920 54 147 7.6E-21 T 31-10-2018 DY252_04230 e9f5d3538db9adbd2e5ca5a254c58dfb 786 SUPERFAMILY SSF55785 213 336 1.15E-9 T 31-10-2018 IPR035965 PAS domain superfamily DY252_04230 e9f5d3538db9adbd2e5ca5a254c58dfb 786 SMART SM00052 520 766 2.3E-131 T 31-10-2018 IPR001633 EAL domain DY252_04230 e9f5d3538db9adbd2e5ca5a254c58dfb 786 Gene3D G3DSA:3.30.70.270 348 523 2.3E-62 T 31-10-2018 DY252_04230 e9f5d3538db9adbd2e5ca5a254c58dfb 786 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 346 508 1.5E-45 T 31-10-2018 IPR000160 GGDEF domain DY252_04230 e9f5d3538db9adbd2e5ca5a254c58dfb 786 Gene3D G3DSA:3.20.20.450 524 775 1.2E-107 T 31-10-2018 IPR035919 EAL domain superfamily DY252_04230 e9f5d3538db9adbd2e5ca5a254c58dfb 786 SUPERFAMILY SSF55073 354 510 7.38E-51 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_04230 e9f5d3538db9adbd2e5ca5a254c58dfb 786 Pfam PF12860 PAS fold 229 342 1.7E-43 T 31-10-2018 DY252_04230 e9f5d3538db9adbd2e5ca5a254c58dfb 786 SMART SM00267 338 510 6.9E-64 T 31-10-2018 IPR000160 GGDEF domain DY252_04230 e9f5d3538db9adbd2e5ca5a254c58dfb 786 SUPERFAMILY SSF158472 164 208 7.98E-5 T 31-10-2018 DY252_04230 e9f5d3538db9adbd2e5ca5a254c58dfb 786 SUPERFAMILY SSF141868 525 774 4.18E-97 T 31-10-2018 IPR035919 EAL domain superfamily DY252_04230 e9f5d3538db9adbd2e5ca5a254c58dfb 786 Gene3D G3DSA:3.30.450.20 221 347 3.2E-9 T 31-10-2018 DY252_04230 e9f5d3538db9adbd2e5ca5a254c58dfb 786 Gene3D G3DSA:1.20.1480.50 131 220 2.5E-5 T 31-10-2018 DY252_04230 e9f5d3538db9adbd2e5ca5a254c58dfb 786 Pfam PF00990 Diguanylate cyclase, GGDEF domain 349 506 1.2E-50 T 31-10-2018 IPR000160 GGDEF domain DY252_04230 e9f5d3538db9adbd2e5ca5a254c58dfb 786 Pfam PF00563 EAL domain 526 761 5.3E-80 T 31-10-2018 IPR001633 EAL domain DY252_10145 ef29f3e1cac51a606c4d4b3abd0d1bc7 449 Gene3D G3DSA:3.40.120.10 176 365 3.8E-67 T 31-10-2018 DY252_10145 ef29f3e1cac51a606c4d4b3abd0d1bc7 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 366 3.3E-32 T 31-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_10145 ef29f3e1cac51a606c4d4b3abd0d1bc7 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 31-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_10145 ef29f3e1cac51a606c4d4b3abd0d1bc7 449 Gene3D G3DSA:3.30.310.50 373 449 2.1E-21 T 31-10-2018 DY252_10145 ef29f3e1cac51a606c4d4b3abd0d1bc7 449 SUPERFAMILY SSF53738 260 366 9.81E-30 T 31-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_10145 ef29f3e1cac51a606c4d4b3abd0d1bc7 449 Gene3D G3DSA:3.40.120.10 259 342 3.8E-67 T 31-10-2018 DY252_10145 ef29f3e1cac51a606c4d4b3abd0d1bc7 449 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 447 45.999 T 31-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_10145 ef29f3e1cac51a606c4d4b3abd0d1bc7 449 SUPERFAMILY SSF55957 361 448 1.31E-19 T 31-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_10145 ef29f3e1cac51a606c4d4b3abd0d1bc7 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 2.9E-18 T 31-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_10145 ef29f3e1cac51a606c4d4b3abd0d1bc7 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.3E-11 T 31-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_10145 ef29f3e1cac51a606c4d4b3abd0d1bc7 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 1.3E-11 T 31-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_10145 ef29f3e1cac51a606c4d4b3abd0d1bc7 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 1.3E-11 T 31-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_10145 ef29f3e1cac51a606c4d4b3abd0d1bc7 449 SUPERFAMILY SSF53738 2 183 1.02E-48 T 31-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_10145 ef29f3e1cac51a606c4d4b3abd0d1bc7 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 4.2E-45 T 31-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_10145 ef29f3e1cac51a606c4d4b3abd0d1bc7 449 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 444 3.3E-182 T 31-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_10145 ef29f3e1cac51a606c4d4b3abd0d1bc7 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 444 1.5E-12 T 31-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_10145 ef29f3e1cac51a606c4d4b3abd0d1bc7 449 Gene3D G3DSA:3.40.120.10 2 153 2.9E-50 T 31-10-2018 DY252_10145 ef29f3e1cac51a606c4d4b3abd0d1bc7 449 SUPERFAMILY SSF53738 158 258 2.32E-27 T 31-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_07330 e2f36aed0c12c84e426a2687456aff35 459 SUPERFAMILY SSF56112 100 337 5.52E-21 T 31-10-2018 IPR011009 Protein kinase-like domain superfamily DY252_07330 e2f36aed0c12c84e426a2687456aff35 459 Pfam PF03109 ABC1 family 112 226 2.0E-29 T 31-10-2018 IPR004147 UbiB domain DY252_11980 a54535f5bfd00acec95bc04477319557 354 Gene3D G3DSA:1.20.970.10 20 88 5.5E-19 T 31-10-2018 DY252_11980 a54535f5bfd00acec95bc04477319557 354 Pfam PF00591 Glycosyl transferase family, a/b domain 125 278 2.4E-8 T 31-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_11980 a54535f5bfd00acec95bc04477319557 354 Pfam PF02885 Glycosyl transferase family, helical bundle domain 32 88 1.5E-14 T 31-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_11980 a54535f5bfd00acec95bc04477319557 354 Gene3D G3DSA:3.40.1030.10 98 352 1.6E-48 T 31-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_11980 a54535f5bfd00acec95bc04477319557 354 SUPERFAMILY SSF52418 103 349 8.24E-44 T 31-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_11980 a54535f5bfd00acec95bc04477319557 354 SUPERFAMILY SSF47648 28 88 2.49E-14 T 31-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_18880 fbcceac2232478fe0033f1a91d95f62e 145 Gene3D G3DSA:1.10.10.10 5 56 4.1E-20 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_18880 fbcceac2232478fe0033f1a91d95f62e 145 SMART SM00344 4 113 3.4E-34 T 31-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DY252_18880 fbcceac2232478fe0033f1a91d95f62e 145 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 3.6E-16 T 31-10-2018 DY252_18880 fbcceac2232478fe0033f1a91d95f62e 145 Gene3D G3DSA:3.30.70.920 57 139 7.1E-20 T 31-10-2018 DY252_18880 fbcceac2232478fe0033f1a91d95f62e 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 3.6E-15 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_18880 fbcceac2232478fe0033f1a91d95f62e 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 3.6E-15 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_18880 fbcceac2232478fe0033f1a91d95f62e 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 3.6E-15 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_18880 fbcceac2232478fe0033f1a91d95f62e 145 SUPERFAMILY SSF54909 66 145 7.51E-15 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_18880 fbcceac2232478fe0033f1a91d95f62e 145 SUPERFAMILY SSF46785 4 63 6.84E-15 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_18880 fbcceac2232478fe0033f1a91d95f62e 145 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 31-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DY252_18880 fbcceac2232478fe0033f1a91d95f62e 145 Pfam PF01037 Lrp/AsnC ligand binding domain 70 141 2.1E-16 T 31-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DY252_14030 6a14fcd5257326725187504aa1dc667e 167 Gene3D G3DSA:1.10.10.10 2 148 3.0E-30 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_14030 6a14fcd5257326725187504aa1dc667e 167 SMART SM00347 29 129 1.0E-10 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_14030 6a14fcd5257326725187504aa1dc667e 167 Pfam PF01047 MarR family 42 93 8.2E-14 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_14030 6a14fcd5257326725187504aa1dc667e 167 SUPERFAMILY SSF46785 11 146 5.54E-28 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_14030 6a14fcd5257326725187504aa1dc667e 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 5.9E-8 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_14030 6a14fcd5257326725187504aa1dc667e 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 5.9E-8 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_14030 6a14fcd5257326725187504aa1dc667e 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 5.9E-8 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_14030 6a14fcd5257326725187504aa1dc667e 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 5.9E-8 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_19410 60810b76931195651f721397d420e932 515 SUPERFAMILY SSF52540 283 492 1.23E-40 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_19410 60810b76931195651f721397d420e932 515 Pfam PF00005 ABC transporter 27 183 1.8E-28 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_19410 60810b76931195651f721397d420e932 515 Gene3D G3DSA:3.40.50.300 1 270 3.3E-55 T 31-10-2018 DY252_19410 60810b76931195651f721397d420e932 515 Gene3D G3DSA:3.40.50.300 276 508 2.2E-39 T 31-10-2018 DY252_19410 60810b76931195651f721397d420e932 515 SUPERFAMILY SSF52540 11 242 2.61E-54 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_19410 60810b76931195651f721397d420e932 515 ProSitePatterns PS00211 ABC transporters family signature. 411 425 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_19410 60810b76931195651f721397d420e932 515 Pfam PF00005 ABC transporter 284 438 2.5E-14 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_19410 60810b76931195651f721397d420e932 515 SMART SM00382 36 240 8.3E-12 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_10060 a8eda0530e1e41958a5ebe630b21e928 176 Gene3D G3DSA:3.30.420.10 4 158 1.3E-46 T 31-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DY252_10060 a8eda0530e1e41958a5ebe630b21e928 176 SUPERFAMILY SSF53098 3 157 2.77E-50 T 31-10-2018 IPR012337 Ribonuclease H-like superfamily DY252_10060 a8eda0530e1e41958a5ebe630b21e928 176 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 154 46.369 T 31-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DY252_10060 a8eda0530e1e41958a5ebe630b21e928 176 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 62 78 2.9E-34 T 31-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DY252_10060 a8eda0530e1e41958a5ebe630b21e928 176 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 2.9E-34 T 31-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DY252_10060 a8eda0530e1e41958a5ebe630b21e928 176 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 84 100 2.9E-34 T 31-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DY252_10060 a8eda0530e1e41958a5ebe630b21e928 176 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 108 127 2.9E-34 T 31-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DY252_10060 a8eda0530e1e41958a5ebe630b21e928 176 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 2.9E-34 T 31-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DY252_10060 a8eda0530e1e41958a5ebe630b21e928 176 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 5.6E-43 T 31-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DY252_10060 a8eda0530e1e41958a5ebe630b21e928 176 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 151 1.3E-46 T 31-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DY252_10060 a8eda0530e1e41958a5ebe630b21e928 176 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 114 148 - T 31-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 DY252_21380 c4396cb7afc640c53552a61e6846bd1c 461 Pfam PF06508 Queuosine biosynthesis protein QueC 251 344 1.0E-5 T 31-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DY252_21380 c4396cb7afc640c53552a61e6846bd1c 461 SUPERFAMILY SSF52402 149 352 4.6E-8 T 31-10-2018 DY252_21380 c4396cb7afc640c53552a61e6846bd1c 461 Gene3D G3DSA:3.40.50.620 146 357 6.3E-17 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_14390 a81af1350499035e52596d4e7b4e6689 672 Gene3D G3DSA:2.40.170.20 170 672 5.9E-63 T 31-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DY252_14390 a81af1350499035e52596d4e7b4e6689 672 Gene3D G3DSA:2.170.130.10 65 168 2.1E-32 T 31-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DY252_14390 a81af1350499035e52596d4e7b4e6689 672 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 162 1.9E-14 T 31-10-2018 IPR012910 TonB-dependent receptor, plug domain DY252_14390 a81af1350499035e52596d4e7b4e6689 672 SUPERFAMILY SSF56935 42 672 4.76E-61 T 31-10-2018 DY252_14390 a81af1350499035e52596d4e7b4e6689 672 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 655 672 - T 31-10-2018 IPR010917 TonB-dependent receptor, conserved site DY252_14390 a81af1350499035e52596d4e7b4e6689 672 Pfam PF00593 TonB dependent receptor 271 670 6.0E-19 T 31-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DY252_08940 fa75f62017cc2c34f26659e54f9f0c04 1395 Gene3D G3DSA:2.40.50.100 1139 1206 3.7E-66 T 31-10-2018 DY252_08940 fa75f62017cc2c34f26659e54f9f0c04 1395 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1368 18.857 T 31-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08940 fa75f62017cc2c34f26659e54f9f0c04 1395 Gene3D G3DSA:1.10.1790.20 1123 1305 3.7E-66 T 31-10-2018 DY252_08940 fa75f62017cc2c34f26659e54f9f0c04 1395 Gene3D G3DSA:2.40.50.100 938 1012 3.2E-24 T 31-10-2018 DY252_08940 fa75f62017cc2c34f26659e54f9f0c04 1395 Gene3D G3DSA:1.10.150.390 1307 1369 2.2E-27 T 31-10-2018 DY252_08940 fa75f62017cc2c34f26659e54f9f0c04 1395 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 343 4.7E-92 T 31-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08940 fa75f62017cc2c34f26659e54f9f0c04 1395 Gene3D G3DSA:1.10.274.100 491 636 5.3E-32 T 31-10-2018 DY252_08940 fa75f62017cc2c34f26659e54f9f0c04 1395 Pfam PF05000 RNA polymerase Rpb1, domain 4 672 753 1.9E-16 T 31-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08940 fa75f62017cc2c34f26659e54f9f0c04 1395 Pfam PF04998 RNA polymerase Rpb1, domain 5 756 1306 1.1E-74 T 31-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08940 fa75f62017cc2c34f26659e54f9f0c04 1395 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1011 0.0 T 31-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08940 fa75f62017cc2c34f26659e54f9f0c04 1395 Gene3D G3DSA:1.10.40.90 375 417 4.6E-21 T 31-10-2018 DY252_08940 fa75f62017cc2c34f26659e54f9f0c04 1395 Gene3D G3DSA:1.10.132.30 637 780 3.6E-62 T 31-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08940 fa75f62017cc2c34f26659e54f9f0c04 1395 Pfam PF00623 RNA polymerase Rpb1, domain 2 391 486 1.1E-27 T 31-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08940 fa75f62017cc2c34f26659e54f9f0c04 1395 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 382 5.7E-8 T 31-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08940 fa75f62017cc2c34f26659e54f9f0c04 1395 SMART SM00663 236 515 1.4E-183 T 31-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08940 fa75f62017cc2c34f26659e54f9f0c04 1395 SUPERFAMILY SSF64484 16 1354 0.0 T 31-10-2018 DY252_08940 fa75f62017cc2c34f26659e54f9f0c04 1395 Gene3D G3DSA:2.40.50.100 1013 1114 1.8E-28 T 31-10-2018 DY252_08940 fa75f62017cc2c34f26659e54f9f0c04 1395 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 643 2.5E-25 T 31-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_03735 e0a02ec7bec25bfd308d948d628f77eb 424 SUPERFAMILY SSF141571 267 411 8.73E-27 T 31-10-2018 DY252_03735 e0a02ec7bec25bfd308d948d628f77eb 424 Gene3D G3DSA:2.160.20.80 171 230 2.8E-18 T 31-10-2018 DY252_03735 e0a02ec7bec25bfd308d948d628f77eb 424 Gene3D G3DSA:2.160.20.80 118 170 2.6E-9 T 31-10-2018 DY252_03735 e0a02ec7bec25bfd308d948d628f77eb 424 Gene3D G3DSA:2.160.20.80 264 418 4.3E-28 T 31-10-2018 DY252_03735 e0a02ec7bec25bfd308d948d628f77eb 424 Gene3D G3DSA:2.160.20.100 24 117 1.6E-18 T 31-10-2018 DY252_03735 e0a02ec7bec25bfd308d948d628f77eb 424 Pfam PF00805 Pentapeptide repeats (8 copies) 360 394 5.2E-9 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_03735 e0a02ec7bec25bfd308d948d628f77eb 424 Pfam PF00805 Pentapeptide repeats (8 copies) 30 64 2.8E-4 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_03735 e0a02ec7bec25bfd308d948d628f77eb 424 Pfam PF00805 Pentapeptide repeats (8 copies) 270 300 4.2E-4 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_03735 e0a02ec7bec25bfd308d948d628f77eb 424 Pfam PF00805 Pentapeptide repeats (8 copies) 67 106 9.2E-10 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_03735 e0a02ec7bec25bfd308d948d628f77eb 424 Pfam PF00805 Pentapeptide repeats (8 copies) 189 225 6.1E-11 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_03735 e0a02ec7bec25bfd308d948d628f77eb 424 Pfam PF00805 Pentapeptide repeats (8 copies) 144 183 4.9E-10 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_03735 e0a02ec7bec25bfd308d948d628f77eb 424 SUPERFAMILY SSF141571 127 228 3.4E-28 T 31-10-2018 DY252_03735 e0a02ec7bec25bfd308d948d628f77eb 424 SUPERFAMILY SSF141571 30 110 2.88E-19 T 31-10-2018 DY252_20885 2e2ba027386ee81a6e80f27b08a62a43 165 Gene3D G3DSA:1.20.1260.10 97 164 3.9E-11 T 31-10-2018 IPR012347 Ferritin-like DY252_20885 2e2ba027386ee81a6e80f27b08a62a43 165 Pfam PF03713 Domain of unknown function (DUF305) 112 161 3.2E-11 T 31-10-2018 IPR005183 Domain of unknown function DUF305 DY252_20330 e03b90c934ee56381fb84eacb8ead675 316 Gene3D G3DSA:3.90.110.10 147 315 5.1E-67 T 31-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DY252_20330 e03b90c934ee56381fb84eacb8ead675 316 SUPERFAMILY SSF51735 5 144 4.1E-45 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_20330 e03b90c934ee56381fb84eacb8ead675 316 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 307 3.9E-31 T 31-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 DY252_20330 e03b90c934ee56381fb84eacb8ead675 316 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 143 1.1E-39 T 31-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_20330 e03b90c934ee56381fb84eacb8ead675 316 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 3 309 2.0E-131 T 31-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 DY252_20330 e03b90c934ee56381fb84eacb8ead675 316 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 1.1E-28 T 31-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DY252_20330 e03b90c934ee56381fb84eacb8ead675 316 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 1.1E-28 T 31-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DY252_20330 e03b90c934ee56381fb84eacb8ead675 316 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 1.1E-28 T 31-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DY252_20330 e03b90c934ee56381fb84eacb8ead675 316 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 1.1E-28 T 31-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DY252_20330 e03b90c934ee56381fb84eacb8ead675 316 PRINTS PR00086 L-lactate dehydrogenase signature 29 53 1.1E-28 T 31-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DY252_20330 e03b90c934ee56381fb84eacb8ead675 316 SUPERFAMILY SSF56327 146 314 1.87E-57 T 31-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DY252_20330 e03b90c934ee56381fb84eacb8ead675 316 PIRSF PIRSF000102 1 315 6.2E-103 T 31-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DY252_20330 e03b90c934ee56381fb84eacb8ead675 316 Hamap MF_00487 Malate dehydrogenase [mdh]. 3 313 46.457 T 31-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 DY252_20330 e03b90c934ee56381fb84eacb8ead675 316 Gene3D G3DSA:3.40.50.720 1 145 2.0E-54 T 31-10-2018 DY252_00865 1a44d963602a0e7af9be7550ce8585b7 192 SUPERFAMILY SSF53254 1 187 4.71E-33 T 31-10-2018 IPR029033 Histidine phosphatase superfamily DY252_00865 1a44d963602a0e7af9be7550ce8585b7 192 Gene3D G3DSA:3.40.50.1240 1 181 7.0E-31 T 31-10-2018 IPR029033 Histidine phosphatase superfamily DY252_00865 1a44d963602a0e7af9be7550ce8585b7 192 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 1 177 1.6E-31 T 31-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DY252_00865 1a44d963602a0e7af9be7550ce8585b7 192 PIRSF PIRSF000709 24 173 2.9E-4 T 31-10-2018 DY252_20455 d29c8a9f46638c4643ba4b464d3dfc59 347 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 317 9.7E-45 T 31-10-2018 IPR000160 GGDEF domain DY252_20455 d29c8a9f46638c4643ba4b464d3dfc59 347 Gene3D G3DSA:3.30.70.270 144 322 1.0E-54 T 31-10-2018 DY252_20455 d29c8a9f46638c4643ba4b464d3dfc59 347 SUPERFAMILY SSF55073 163 319 2.51E-46 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_20455 d29c8a9f46638c4643ba4b464d3dfc59 347 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 154 319 3.3E-51 T 31-10-2018 IPR000160 GGDEF domain DY252_20455 d29c8a9f46638c4643ba4b464d3dfc59 347 SMART SM00267 147 321 1.4E-56 T 31-10-2018 IPR000160 GGDEF domain DY252_13210 0f700509c515f1a7230194f51f06c602 285 Gene3D G3DSA:3.20.20.70 2 280 5.5E-103 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_13210 0f700509c515f1a7230194f51f06c602 285 SUPERFAMILY SSF51569 5 275 4.76E-105 T 31-10-2018 DY252_13210 0f700509c515f1a7230194f51f06c602 285 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 19 274 8.4E-119 T 31-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DY252_13210 0f700509c515f1a7230194f51f06c602 285 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 14 276 51.338 T 31-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DY252_13210 0f700509c515f1a7230194f51f06c602 285 Pfam PF00793 DAHP synthetase I family 10 273 4.7E-70 T 31-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DY252_19530 b58015af107f8bb96e2dc6b501d167db 371 SUPERFAMILY SSF56796 8 365 9.16E-111 T 31-10-2018 DY252_19530 b58015af107f8bb96e2dc6b501d167db 371 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 4 369 66.264 T 31-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DY252_19530 b58015af107f8bb96e2dc6b501d167db 371 Gene3D G3DSA:3.40.50.1970 1 176 1.5E-61 T 31-10-2018 DY252_19530 b58015af107f8bb96e2dc6b501d167db 371 PIRSF PIRSF001455 7 370 4.5E-105 T 31-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DY252_19530 b58015af107f8bb96e2dc6b501d167db 371 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 16 361 2.9E-114 T 31-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DY252_19530 b58015af107f8bb96e2dc6b501d167db 371 Pfam PF01761 3-dehydroquinate synthase 71 334 3.8E-102 T 31-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DY252_19530 b58015af107f8bb96e2dc6b501d167db 371 Gene3D G3DSA:1.20.1090.10 177 371 5.5E-60 T 31-10-2018 DY252_12755 d1882917913743b0e101e2b02a3c1a40 459 SUPERFAMILY SSF51735 1 152 1.12E-35 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_12755 d1882917913743b0e101e2b02a3c1a40 459 Gene3D G3DSA:3.40.50.720 234 371 1.4E-33 T 31-10-2018 DY252_12755 d1882917913743b0e101e2b02a3c1a40 459 SUPERFAMILY SSF116726 136 227 8.11E-13 T 31-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DY252_12755 d1882917913743b0e101e2b02a3c1a40 459 Gene3D G3DSA:3.40.50.720 2 140 9.2E-45 T 31-10-2018 DY252_12755 d1882917913743b0e101e2b02a3c1a40 459 Pfam PF02080 TrkA-C domain 387 452 7.7E-14 T 31-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DY252_12755 d1882917913743b0e101e2b02a3c1a40 459 Pfam PF02080 TrkA-C domain 162 227 1.8E-8 T 31-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DY252_12755 d1882917913743b0e101e2b02a3c1a40 459 Pfam PF02254 TrkA-N domain 3 126 6.0E-27 T 31-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DY252_12755 d1882917913743b0e101e2b02a3c1a40 459 Pfam PF02254 TrkA-N domain 236 355 1.5E-21 T 31-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DY252_12755 d1882917913743b0e101e2b02a3c1a40 459 SUPERFAMILY SSF116726 366 452 3.4E-12 T 31-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DY252_12755 d1882917913743b0e101e2b02a3c1a40 459 Gene3D G3DSA:3.30.70.1450 141 233 5.0E-16 T 31-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DY252_12755 d1882917913743b0e101e2b02a3c1a40 459 Gene3D G3DSA:3.30.70.1450 372 459 1.5E-22 T 31-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DY252_12755 d1882917913743b0e101e2b02a3c1a40 459 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 6.6E-24 T 31-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DY252_12755 d1882917913743b0e101e2b02a3c1a40 459 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 6.6E-24 T 31-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DY252_12755 d1882917913743b0e101e2b02a3c1a40 459 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 6.6E-24 T 31-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DY252_12755 d1882917913743b0e101e2b02a3c1a40 459 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 6.6E-24 T 31-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DY252_12755 d1882917913743b0e101e2b02a3c1a40 459 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 6.6E-24 T 31-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DY252_12755 d1882917913743b0e101e2b02a3c1a40 459 SUPERFAMILY SSF51735 234 381 1.52E-30 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_20195 7f7e496ac7c9ba773b0a487d410f9a23 148 Pfam PF00072 Response regulator receiver domain 13 131 5.8E-18 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_20195 7f7e496ac7c9ba773b0a487d410f9a23 148 SMART SM00448 10 132 1.5E-23 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_20195 7f7e496ac7c9ba773b0a487d410f9a23 148 SUPERFAMILY SSF52172 11 137 9.53E-31 T 31-10-2018 IPR011006 CheY-like superfamily DY252_20195 7f7e496ac7c9ba773b0a487d410f9a23 148 Gene3D G3DSA:3.40.50.2300 1 146 4.8E-34 T 31-10-2018 DY252_13225 20ffb1a65086df43db4c86fd3c1f8836 251 Pfam PF00121 Triosephosphate isomerase 7 247 5.2E-77 T 31-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_13225 20ffb1a65086df43db4c86fd3c1f8836 251 Gene3D G3DSA:3.20.20.70 1 251 7.6E-89 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_13225 20ffb1a65086df43db4c86fd3c1f8836 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 31-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_13225 20ffb1a65086df43db4c86fd3c1f8836 251 SUPERFAMILY SSF51351 2 249 4.84E-84 T 31-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_13225 20ffb1a65086df43db4c86fd3c1f8836 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 240 1.4E-50 T 31-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_13225 20ffb1a65086df43db4c86fd3c1f8836 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 4 249 54.051 T 31-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 SMART SM00091 13 83 1.7 T 31-10-2018 IPR000014 PAS domain DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 SMART SM00091 135 205 7.4E-6 T 31-10-2018 IPR000014 PAS domain DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 Gene3D G3DSA:3.30.450.20 15 149 6.3E-26 T 31-10-2018 DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 SUPERFAMILY SSF55785 27 131 6.28E-25 T 31-10-2018 IPR035965 PAS domain superfamily DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 SUPERFAMILY SSF58104 261 495 3.4E-49 T 31-10-2018 DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 Pfam PF08448 PAS fold 30 131 5.9E-14 T 31-10-2018 IPR013656 PAS fold-4 DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 322 481 6.0E-30 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 135 3.3E-20 T 31-10-2018 IPR000014 PAS domain DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 145 254 2.9E-16 T 31-10-2018 IPR000014 PAS domain DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 276 305 1.2E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 353 380 1.2E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 430 459 1.2E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 382 411 1.2E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 Gene3D G3DSA:1.10.287.950 265 489 1.2E-40 T 31-10-2018 DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 Gene3D G3DSA:3.30.450.20 150 250 6.5E-23 T 31-10-2018 DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 Pfam PF13426 PAS domain 151 251 9.7E-15 T 31-10-2018 IPR000014 PAS domain DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 SUPERFAMILY SSF55785 146 249 5.23E-26 T 31-10-2018 IPR035965 PAS domain superfamily DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 SMART SM00283 262 495 4.2E-29 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 SMART SM00086 210 252 3.9E-4 T 31-10-2018 IPR001610 PAC motif DY252_00750 4f13193371d03cb40d376e2c77d9753e 496 SMART SM00086 88 130 1.7E-6 T 31-10-2018 IPR001610 PAC motif DY252_17850 efd5800ac524c6c76f373c7a846c2c43 205 Gene3D G3DSA:3.10.290.10 93 188 8.0E-71 T 31-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DY252_17850 efd5800ac524c6c76f373c7a846c2c43 205 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 7 93 2.9E-23 T 31-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 DY252_17850 efd5800ac524c6c76f373c7a846c2c43 205 Pfam PF01479 S4 domain 94 141 2.3E-19 T 31-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_17850 efd5800ac524c6c76f373c7a846c2c43 205 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 5 205 7.6E-72 T 31-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 DY252_17850 efd5800ac524c6c76f373c7a846c2c43 205 SMART SM01390 3 93 2.1E-36 T 31-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 DY252_17850 efd5800ac524c6c76f373c7a846c2c43 205 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 205 31.759 T 31-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 DY252_17850 efd5800ac524c6c76f373c7a846c2c43 205 Gene3D G3DSA:1.10.1050.10 7 205 8.0E-71 T 31-10-2018 DY252_17850 efd5800ac524c6c76f373c7a846c2c43 205 SMART SM00363 94 151 1.4E-18 T 31-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_17850 efd5800ac524c6c76f373c7a846c2c43 205 ProSitePatterns PS00632 Ribosomal protein S4 signature. 92 116 - T 31-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_17850 efd5800ac524c6c76f373c7a846c2c43 205 SUPERFAMILY SSF55174 5 205 1.96E-61 T 31-10-2018 DY252_14935 751ef453d5302193fbdd60e4a2537bdd 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 155 182 - T 31-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DY252_14935 751ef453d5302193fbdd60e4a2537bdd 413 SUPERFAMILY SSF51735 109 296 2.57E-59 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_14935 751ef453d5302193fbdd60e4a2537bdd 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 327 5.9E-37 T 31-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DY252_14935 751ef453d5302193fbdd60e4a2537bdd 413 Gene3D G3DSA:3.40.50.720 110 298 6.4E-112 T 31-10-2018 DY252_14935 751ef453d5302193fbdd60e4a2537bdd 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 295 4.6E-56 T 31-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DY252_14935 751ef453d5302193fbdd60e4a2537bdd 413 SUPERFAMILY SSF52283 8 136 2.34E-47 T 31-10-2018 DY252_14935 751ef453d5302193fbdd60e4a2537bdd 413 SUPERFAMILY SSF55021 339 412 1.87E-14 T 31-10-2018 DY252_14935 751ef453d5302193fbdd60e4a2537bdd 413 Gene3D G3DSA:3.30.70.260 329 412 6.4E-26 T 31-10-2018 DY252_14935 751ef453d5302193fbdd60e4a2537bdd 413 Gene3D G3DSA:3.40.50.720 16 313 6.4E-112 T 31-10-2018 DY252_06160 30d1db6d64d3e657ddc027f082d7f24f 116 Pfam PF00355 Rieske [2Fe-2S] domain 6 83 4.8E-14 T 31-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DY252_06160 30d1db6d64d3e657ddc027f082d7f24f 116 Gene3D G3DSA:2.102.10.10 3 114 8.3E-24 T 31-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DY252_06160 30d1db6d64d3e657ddc027f082d7f24f 116 SUPERFAMILY SSF50022 6 109 1.28E-30 T 31-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DY252_06160 30d1db6d64d3e657ddc027f082d7f24f 116 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 6 104 4.5E-24 T 31-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 DY252_18080 107c24b69b8fe83b43fe37c73aac110c 337 SUPERFAMILY SSF52540 3 253 2.79E-64 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18080 107c24b69b8fe83b43fe37c73aac110c 337 Gene3D G3DSA:3.40.50.300 1 324 2.3E-91 T 31-10-2018 DY252_18080 107c24b69b8fe83b43fe37c73aac110c 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 297 8.4E-18 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_18080 107c24b69b8fe83b43fe37c73aac110c 337 SMART SM00382 32 231 6.1E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_18080 107c24b69b8fe83b43fe37c73aac110c 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 9.4E-23 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_18080 107c24b69b8fe83b43fe37c73aac110c 337 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_18080 107c24b69b8fe83b43fe37c73aac110c 337 Pfam PF00005 ABC transporter 24 181 1.9E-26 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_14305 15cb373c5f13c452b5eb3b0692f6031e 216 Gene3D G3DSA:3.40.50.2020 1 216 8.2E-81 T 31-10-2018 DY252_14305 15cb373c5f13c452b5eb3b0692f6031e 216 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 9 216 44.291 T 31-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DY252_14305 15cb373c5f13c452b5eb3b0692f6031e 216 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 10 215 2.6E-80 T 31-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DY252_14305 15cb373c5f13c452b5eb3b0692f6031e 216 Pfam PF14681 Uracil phosphoribosyltransferase 13 215 6.3E-72 T 31-10-2018 DY252_14305 15cb373c5f13c452b5eb3b0692f6031e 216 SUPERFAMILY SSF53271 10 214 1.97E-66 T 31-10-2018 IPR029057 Phosphoribosyltransferase-like DY252_16365 3b39c2eee1082d8860a2e719dcf543d3 387 Gene3D G3DSA:1.10.287.470 100 173 2.9E-78 T 31-10-2018 DY252_16365 3b39c2eee1082d8860a2e719dcf543d3 387 Gene3D G3DSA:2.40.420.20 288 379 3.5E-21 T 31-10-2018 DY252_16365 3b39c2eee1082d8860a2e719dcf543d3 387 Gene3D G3DSA:2.40.30.170 59 287 2.9E-78 T 31-10-2018 DY252_16365 3b39c2eee1082d8860a2e719dcf543d3 387 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 377 4.4E-80 T 31-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DY252_16365 3b39c2eee1082d8860a2e719dcf543d3 387 Gene3D G3DSA:2.40.50.100 65 209 2.9E-78 T 31-10-2018 DY252_16365 3b39c2eee1082d8860a2e719dcf543d3 387 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 296 4.0E-16 T 31-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DY252_16365 3b39c2eee1082d8860a2e719dcf543d3 387 SUPERFAMILY SSF111369 55 303 5.49E-78 T 31-10-2018 DY252_14415 9b76c2ed2418c6fd89721b6b59c3d230 129 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 128 2.3E-17 T 31-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 737 749 3.9E-23 T 31-10-2018 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 513 527 3.9E-23 T 31-10-2018 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 714 733 3.9E-23 T 31-10-2018 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 661 671 3.9E-23 T 31-10-2018 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 363 377 3.9E-23 T 31-10-2018 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 Pfam PF00403 Heavy-metal-associated domain 30 88 9.0E-17 T 31-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 Pfam PF00403 Heavy-metal-associated domain 97 157 6.2E-13 T 31-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 PRINTS PR00942 Copper-transporting ATPase 1 signature 52 75 1.2E-10 T 31-10-2018 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 PRINTS PR00942 Copper-transporting ATPase 1 signature 26 51 1.2E-10 T 31-10-2018 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 PRINTS PR00942 Copper-transporting ATPase 1 signature 231 256 1.2E-10 T 31-10-2018 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 Gene3D G3DSA:3.40.1110.10 524 646 3.9E-90 T 31-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 ProSitePatterns PS01047 Heavy-metal-associated domain. 31 60 - T 31-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 515 521 - T 31-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 285 793 1.2E-90 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 Gene3D G3DSA:3.40.50.1000 494 765 3.9E-90 T 31-10-2018 IPR023214 HAD superfamily DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 Pfam PF00702 haloacid dehalogenase-like hydrolase 509 728 1.9E-41 T 31-10-2018 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 ProSitePatterns PS01047 Heavy-metal-associated domain. 99 128 - T 31-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 SUPERFAMILY SSF81665 279 504 6.93E-14 T 31-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 Pfam PF00122 E1-E2 ATPase 314 493 7.9E-54 T 31-10-2018 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 229 817 2.4E-176 T 31-10-2018 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 96 158 1.1E-9 T 31-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 27 90 4.1E-16 T 31-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 248 816 2.7E-191 T 31-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 SUPERFAMILY SSF56784 511 814 2.09E-58 T 31-10-2018 IPR036412 HAD-like superfamily DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 Gene3D G3DSA:2.70.150.20 300 417 2.7E-36 T 31-10-2018 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 SUPERFAMILY SSF81653 320 413 1.96E-23 T 31-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 Gene3D G3DSA:3.30.70.100 21 92 2.2E-21 T 31-10-2018 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 Gene3D G3DSA:3.30.70.100 93 161 3.6E-20 T 31-10-2018 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 SUPERFAMILY SSF55008 20 91 1.7E-20 T 31-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DY252_13585 220e6d95f5c0c13ae08acfd8fe8802e6 823 SUPERFAMILY SSF55008 93 161 3.67E-19 T 31-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DY252_00585 b87654c105d31acaf7ed6d0152f6aba7 385 SUPERFAMILY SSF52540 8 373 1.08E-33 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_00585 b87654c105d31acaf7ed6d0152f6aba7 385 ProSitePatterns PS00617 RecF protein signature 1. 134 154 - T 31-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 DY252_00585 b87654c105d31acaf7ed6d0152f6aba7 385 Gene3D G3DSA:3.40.50.300 10 359 4.4E-73 T 31-10-2018 DY252_00585 b87654c105d31acaf7ed6d0152f6aba7 385 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 385 79.475 T 31-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 DY252_00585 b87654c105d31acaf7ed6d0152f6aba7 385 Gene3D G3DSA:1.20.1050.90 137 323 4.4E-73 T 31-10-2018 DY252_00585 b87654c105d31acaf7ed6d0152f6aba7 385 ProSitePatterns PS00618 RecF protein signature 2. 324 342 - T 31-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 DY252_00585 b87654c105d31acaf7ed6d0152f6aba7 385 Pfam PF02463 RecF/RecN/SMC N terminal domain 7 360 9.4E-14 T 31-10-2018 IPR003395 RecF/RecN/SMC, N-terminal DY252_13675 632a0bc0ab16db22ff09062d60ae423b 544 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 39 518 41.636 T 31-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_13675 632a0bc0ab16db22ff09062d60ae423b 544 Gene3D G3DSA:3.40.50.10490 91 285 9.9E-229 T 31-10-2018 DY252_13675 632a0bc0ab16db22ff09062d60ae423b 544 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 491 508 - T 31-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_13675 632a0bc0ab16db22ff09062d60ae423b 544 Pfam PF00342 Phosphoglucose isomerase 45 535 8.5E-230 T 31-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_13675 632a0bc0ab16db22ff09062d60ae423b 544 SUPERFAMILY SSF53697 3 542 1.56E-220 T 31-10-2018 DY252_13675 632a0bc0ab16db22ff09062d60ae423b 544 Gene3D G3DSA:3.40.50.10490 5 500 9.9E-229 T 31-10-2018 DY252_13675 632a0bc0ab16db22ff09062d60ae423b 544 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 259 272 - T 31-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_13675 632a0bc0ab16db22ff09062d60ae423b 544 Gene3D G3DSA:1.10.1390.10 501 541 5.6E-17 T 31-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_13675 632a0bc0ab16db22ff09062d60ae423b 544 PRINTS PR00662 Glucose-6-phosphate isomerase signature 477 491 3.5E-56 T 31-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_13675 632a0bc0ab16db22ff09062d60ae423b 544 PRINTS PR00662 Glucose-6-phosphate isomerase signature 491 504 3.5E-56 T 31-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_13675 632a0bc0ab16db22ff09062d60ae423b 544 PRINTS PR00662 Glucose-6-phosphate isomerase signature 332 353 3.5E-56 T 31-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_13675 632a0bc0ab16db22ff09062d60ae423b 544 PRINTS PR00662 Glucose-6-phosphate isomerase signature 255 273 3.5E-56 T 31-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_13675 632a0bc0ab16db22ff09062d60ae423b 544 PRINTS PR00662 Glucose-6-phosphate isomerase signature 143 162 3.5E-56 T 31-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_13675 632a0bc0ab16db22ff09062d60ae423b 544 PRINTS PR00662 Glucose-6-phosphate isomerase signature 459 477 3.5E-56 T 31-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_08700 4a5bf3ef183294101307c8971f0a5617 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 293 2.3E-20 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_08700 4a5bf3ef183294101307c8971f0a5617 307 SUPERFAMILY SSF161098 72 289 3.27E-59 T 31-10-2018 IPR035906 MetI-like superfamily DY252_08700 4a5bf3ef183294101307c8971f0a5617 307 Gene3D G3DSA:1.10.3720.10 54 301 2.2E-67 T 31-10-2018 IPR035906 MetI-like superfamily DY252_19230 3e6af5b146781f48b0a8315ed2715749 336 SUPERFAMILY SSF52283 1 137 2.98E-33 T 31-10-2018 DY252_19230 3e6af5b146781f48b0a8315ed2715749 336 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 326 1.3E-28 T 31-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DY252_19230 3e6af5b146781f48b0a8315ed2715749 336 SUPERFAMILY SSF51735 101 295 3.27E-47 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_19230 3e6af5b146781f48b0a8315ed2715749 336 Gene3D G3DSA:3.40.50.720 98 300 4.9E-103 T 31-10-2018 DY252_19230 3e6af5b146781f48b0a8315ed2715749 336 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 31-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DY252_19230 3e6af5b146781f48b0a8315ed2715749 336 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 294 8.8E-50 T 31-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DY252_19230 3e6af5b146781f48b0a8315ed2715749 336 Gene3D G3DSA:3.40.50.720 6 321 4.9E-103 T 31-10-2018 DY252_09290 af5b8a2dc1b177b1a7953b704682f325 358 SUPERFAMILY SSF102114 48 315 1.0E-41 T 31-10-2018 DY252_09290 af5b8a2dc1b177b1a7953b704682f325 358 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 7 354 3.5E-194 T 31-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme DY252_09290 af5b8a2dc1b177b1a7953b704682f325 358 Gene3D G3DSA:3.20.20.70 68 287 4.3E-33 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_09290 af5b8a2dc1b177b1a7953b704682f325 358 Pfam PF04055 Radical SAM superfamily 81 232 1.5E-16 T 31-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DY252_09290 af5b8a2dc1b177b1a7953b704682f325 358 PIRSF PIRSF004869 3 314 4.9E-89 T 31-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted DY252_09290 af5b8a2dc1b177b1a7953b704682f325 358 Pfam PF13353 4Fe-4S single cluster domain 76 169 4.4E-5 T 31-10-2018 DY252_10115 c6b2e29197bd326887530494f4e010c8 647 SUPERFAMILY SSF140990 404 600 2.09E-73 T 31-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 DY252_10115 c6b2e29197bd326887530494f4e010c8 647 Gene3D G3DSA:2.40.50.920 28 103 2.2E-8 T 31-10-2018 DY252_10115 c6b2e29197bd326887530494f4e010c8 647 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 103 595 1.4E-237 T 31-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 DY252_10115 c6b2e29197bd326887530494f4e010c8 647 Gene3D G3DSA:1.10.8.60 324 398 6.5E-30 T 31-10-2018 DY252_10115 c6b2e29197bd326887530494f4e010c8 647 SMART SM00382 186 325 1.0E-24 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_10115 c6b2e29197bd326887530494f4e010c8 647 Pfam PF06480 FtsH Extracellular 8 94 5.2E-11 T 31-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 DY252_10115 c6b2e29197bd326887530494f4e010c8 647 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 31-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 DY252_10115 c6b2e29197bd326887530494f4e010c8 647 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 5 602 37.449 T 31-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 DY252_10115 c6b2e29197bd326887530494f4e010c8 647 Pfam PF01434 Peptidase family M41 383 593 5.1E-80 T 31-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 DY252_10115 c6b2e29197bd326887530494f4e010c8 647 SUPERFAMILY SSF52540 144 393 8.12E-74 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_10115 c6b2e29197bd326887530494f4e010c8 647 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 4.0E-45 T 31-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DY252_10115 c6b2e29197bd326887530494f4e010c8 647 Gene3D G3DSA:1.20.58.760 399 605 9.0E-73 T 31-10-2018 DY252_10115 c6b2e29197bd326887530494f4e010c8 647 Gene3D G3DSA:3.40.50.300 141 322 1.2E-69 T 31-10-2018 DY252_02745 29a599d9499a3c2b6e252dbe11e0797a 234 SUPERFAMILY SSF46565 176 232 6.54E-12 T 31-10-2018 IPR036869 Chaperone J-domain superfamily DY252_02745 29a599d9499a3c2b6e252dbe11e0797a 234 SMART SM00271 177 234 0.0088 T 31-10-2018 IPR001623 DnaJ domain DY252_02745 29a599d9499a3c2b6e252dbe11e0797a 234 Gene3D G3DSA:1.10.287.110 174 234 2.3E-10 T 31-10-2018 IPR036869 Chaperone J-domain superfamily DY252_04135 806741a20abd38c111174d825c34f1ab 295 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 187 1.0E-60 T 31-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DY252_04135 806741a20abd38c111174d825c34f1ab 295 SUPERFAMILY SSF51735 7 189 1.93E-57 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_04135 806741a20abd38c111174d825c34f1ab 295 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 187 212 - T 31-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DY252_04135 806741a20abd38c111174d825c34f1ab 295 PIRSF PIRSF000105 2 295 4.6E-83 T 31-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 DY252_04135 806741a20abd38c111174d825c34f1ab 295 Gene3D G3DSA:1.10.1040.50 194 295 1.9E-34 T 31-10-2018 DY252_04135 806741a20abd38c111174d825c34f1ab 295 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 191 286 4.4E-34 T 31-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DY252_04135 806741a20abd38c111174d825c34f1ab 295 Gene3D G3DSA:3.40.50.720 6 193 1.1E-66 T 31-10-2018 DY252_04135 806741a20abd38c111174d825c34f1ab 295 SUPERFAMILY SSF48179 189 291 2.13E-34 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_14535 dfd2aea160ff931ac1255d5ebb7bc316 469 SUPERFAMILY SSF55931 103 468 2.45E-139 T 31-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DY252_14535 dfd2aea160ff931ac1255d5ebb7bc316 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 96 1.1E-31 T 31-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DY252_14535 dfd2aea160ff931ac1255d5ebb7bc316 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.6E-140 T 31-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_14535 dfd2aea160ff931ac1255d5ebb7bc316 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 468 1.0E-203 T 31-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_14535 dfd2aea160ff931ac1255d5ebb7bc316 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 31-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DY252_14535 dfd2aea160ff931ac1255d5ebb7bc316 469 Gene3D G3DSA:3.10.20.70 4 105 8.7E-38 T 31-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_14535 dfd2aea160ff931ac1255d5ebb7bc316 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 31-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_14535 dfd2aea160ff931ac1255d5ebb7bc316 469 Gene3D G3DSA:3.30.590.10 106 456 6.8E-144 T 31-10-2018 DY252_14535 dfd2aea160ff931ac1255d5ebb7bc316 469 SMART SM01230 103 379 1.5E-144 T 31-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_14535 dfd2aea160ff931ac1255d5ebb7bc316 469 SUPERFAMILY SSF54368 5 101 4.58E-36 T 31-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_14535 dfd2aea160ff931ac1255d5ebb7bc316 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 51 69 - T 31-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DY252_18095 9070a14fd92c08780e6bbd51949b814b 167 Gene3D G3DSA:2.60.120.10 2 166 7.5E-56 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_18095 9070a14fd92c08780e6bbd51949b814b 167 Pfam PF06172 Cupin superfamily (DUF985) 9 144 5.7E-43 T 31-10-2018 IPR009327 Cupin domain of unknown function DUF985 DY252_18095 9070a14fd92c08780e6bbd51949b814b 167 SUPERFAMILY SSF51182 4 166 4.15E-53 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_13020 08ac56cbaa5cc7ac8e231033b99514f3 324 Gene3D G3DSA:3.30.1330.60 112 291 2.9E-51 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_13020 08ac56cbaa5cc7ac8e231033b99514f3 324 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 7 58 1.1E-18 T 31-10-2018 IPR025713 Motility protein B, N-terminal domain DY252_13020 08ac56cbaa5cc7ac8e231033b99514f3 324 Pfam PF00691 OmpA family 164 258 4.9E-11 T 31-10-2018 IPR006665 OmpA-like domain DY252_13020 08ac56cbaa5cc7ac8e231033b99514f3 324 SUPERFAMILY SSF103088 161 267 1.12E-19 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_17775 416101e62c2669ba24dd4c4940b555a3 121 SMART SM00448 2 115 2.5E-36 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_17775 416101e62c2669ba24dd4c4940b555a3 121 Pfam PF00072 Response regulator receiver domain 5 114 1.9E-27 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_17775 416101e62c2669ba24dd4c4940b555a3 121 Gene3D G3DSA:3.40.50.12740 2 120 6.8E-37 T 31-10-2018 DY252_17775 416101e62c2669ba24dd4c4940b555a3 121 SUPERFAMILY SSF52172 1 118 4.13E-37 T 31-10-2018 IPR011006 CheY-like superfamily DY252_21565 60b50d0a957938a4076a6efae29c889c 335 Gene3D G3DSA:3.40.50.720 8 330 7.6E-127 T 31-10-2018 DY252_21565 60b50d0a957938a4076a6efae29c889c 335 SUPERFAMILY SSF51735 6 155 5.9E-43 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_21565 60b50d0a957938a4076a6efae29c889c 335 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 138 319 5.0E-51 T 31-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DY252_21565 60b50d0a957938a4076a6efae29c889c 335 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 7 334 2.9E-112 T 31-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DY252_21565 60b50d0a957938a4076a6efae29c889c 335 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 118 4.6E-30 T 31-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DY252_21565 60b50d0a957938a4076a6efae29c889c 335 SUPERFAMILY SSF55347 128 320 1.49E-68 T 31-10-2018 DY252_21565 60b50d0a957938a4076a6efae29c889c 335 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 5 333 33.788 T 31-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DY252_21565 60b50d0a957938a4076a6efae29c889c 335 Gene3D G3DSA:3.30.360.10 127 316 7.6E-127 T 31-10-2018 DY252_21565 60b50d0a957938a4076a6efae29c889c 335 PIRSF PIRSF000148 5 335 1.6E-114 T 31-10-2018 DY252_21565 60b50d0a957938a4076a6efae29c889c 335 SMART SM00859 7 121 7.7E-38 T 31-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DY252_06150 7e48d892384a287081ea18271b1c50ff 335 Pfam PF13241 Putative NAD(P)-binding 34 142 6.9E-26 T 31-10-2018 DY252_06150 7e48d892384a287081ea18271b1c50ff 335 Pfam PF10414 Sirohaem synthase dimerisation region 178 214 4.6E-7 T 31-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DY252_06150 7e48d892384a287081ea18271b1c50ff 335 SUPERFAMILY SSF75615 141 214 3.53E-17 T 31-10-2018 DY252_06150 7e48d892384a287081ea18271b1c50ff 335 Gene3D G3DSA:3.30.160.110 140 175 7.7E-16 T 31-10-2018 DY252_06150 7e48d892384a287081ea18271b1c50ff 335 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 31 215 1.4E-58 T 31-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DY252_06150 7e48d892384a287081ea18271b1c50ff 335 Gene3D G3DSA:3.40.50.720 28 139 3.8E-32 T 31-10-2018 DY252_06150 7e48d892384a287081ea18271b1c50ff 335 SUPERFAMILY SSF51735 29 139 6.76E-23 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_01715 480f638c95c37cfb10abdac61cca20a0 516 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 506 7.0E-137 T 31-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DY252_01715 480f638c95c37cfb10abdac61cca20a0 516 Pfam PF03023 MviN-like protein 28 466 8.2E-122 T 31-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DY252_01715 480f638c95c37cfb10abdac61cca20a0 516 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 19.555 T 31-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DY252_01715 480f638c95c37cfb10abdac61cca20a0 516 PIRSF PIRSF002869 1 512 2.1E-159 T 31-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DY252_01715 480f638c95c37cfb10abdac61cca20a0 516 PRINTS PR01806 Virulence factor MviN signature 157 178 1.8E-70 T 31-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DY252_01715 480f638c95c37cfb10abdac61cca20a0 516 PRINTS PR01806 Virulence factor MviN signature 52 68 1.8E-70 T 31-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DY252_01715 480f638c95c37cfb10abdac61cca20a0 516 PRINTS PR01806 Virulence factor MviN signature 133 157 1.8E-70 T 31-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DY252_01715 480f638c95c37cfb10abdac61cca20a0 516 PRINTS PR01806 Virulence factor MviN signature 33 52 1.8E-70 T 31-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DY252_01715 480f638c95c37cfb10abdac61cca20a0 516 PRINTS PR01806 Virulence factor MviN signature 259 285 1.8E-70 T 31-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DY252_01715 480f638c95c37cfb10abdac61cca20a0 516 PRINTS PR01806 Virulence factor MviN signature 357 376 1.8E-70 T 31-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DY252_01715 480f638c95c37cfb10abdac61cca20a0 516 PRINTS PR01806 Virulence factor MviN signature 409 426 1.8E-70 T 31-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DY252_02345 ba6b0fff58e47d6d21d2ee9e02247de9 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-11 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_02345 ba6b0fff58e47d6d21d2ee9e02247de9 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-11 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_02345 ba6b0fff58e47d6d21d2ee9e02247de9 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-11 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_02345 ba6b0fff58e47d6d21d2ee9e02247de9 310 Gene3D G3DSA:3.40.190.10 104 291 9.7E-63 T 31-10-2018 DY252_02345 ba6b0fff58e47d6d21d2ee9e02247de9 310 SUPERFAMILY SSF46785 3 83 2.96E-22 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_02345 ba6b0fff58e47d6d21d2ee9e02247de9 310 Gene3D G3DSA:3.40.190.10 164 264 9.7E-63 T 31-10-2018 DY252_02345 ba6b0fff58e47d6d21d2ee9e02247de9 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 9.1E-21 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_02345 ba6b0fff58e47d6d21d2ee9e02247de9 310 Gene3D G3DSA:1.10.10.10 6 90 2.7E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_02345 ba6b0fff58e47d6d21d2ee9e02247de9 310 Pfam PF03466 LysR substrate binding domain 94 295 2.6E-40 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_02345 ba6b0fff58e47d6d21d2ee9e02247de9 310 SUPERFAMILY SSF53850 94 298 1.47E-42 T 31-10-2018 DY252_16165 81ace19f204cbb07e48230416f96583b 289 Gene3D G3DSA:1.20.120.530 113 256 1.7E-17 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_16165 81ace19f204cbb07e48230416f96583b 289 Pfam PF07729 FCD domain 116 243 8.5E-15 T 31-10-2018 IPR011711 GntR, C-terminal DY252_16165 81ace19f204cbb07e48230416f96583b 289 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 63 79 1.5E-6 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_16165 81ace19f204cbb07e48230416f96583b 289 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 63 1.5E-6 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_16165 81ace19f204cbb07e48230416f96583b 289 SUPERFAMILY SSF48008 114 250 7.06E-17 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_16165 81ace19f204cbb07e48230416f96583b 289 SUPERFAMILY SSF46785 22 104 3.28E-15 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_16165 81ace19f204cbb07e48230416f96583b 289 SMART SM00895 116 245 3.8E-13 T 31-10-2018 IPR011711 GntR, C-terminal DY252_16165 81ace19f204cbb07e48230416f96583b 289 Pfam PF00392 Bacterial regulatory proteins, gntR family 30 86 3.1E-13 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_16165 81ace19f204cbb07e48230416f96583b 289 Gene3D G3DSA:1.10.10.10 24 94 7.7E-17 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_16165 81ace19f204cbb07e48230416f96583b 289 SMART SM00345 30 91 5.2E-12 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_04540 e3eb2813fba5bfd2d486dee7ea3207f5 273 Gene3D G3DSA:3.40.50.300 10 253 4.4E-56 T 31-10-2018 DY252_04540 e3eb2813fba5bfd2d486dee7ea3207f5 273 Pfam PF00005 ABC transporter 31 179 5.3E-25 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_04540 e3eb2813fba5bfd2d486dee7ea3207f5 273 SUPERFAMILY SSF52540 12 251 4.22E-54 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_04540 e3eb2813fba5bfd2d486dee7ea3207f5 273 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_04540 e3eb2813fba5bfd2d486dee7ea3207f5 273 SMART SM00382 40 246 2.9E-6 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_12010 5b3c6be5e5d6aea0e0c00b0ec95301ad 235 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_12010 5b3c6be5e5d6aea0e0c00b0ec95301ad 235 Gene3D G3DSA:3.40.50.300 2 235 1.6E-64 T 31-10-2018 DY252_12010 5b3c6be5e5d6aea0e0c00b0ec95301ad 235 SUPERFAMILY SSF52540 4 217 7.32E-56 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12010 5b3c6be5e5d6aea0e0c00b0ec95301ad 235 SMART SM00382 30 213 4.0E-14 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_12010 5b3c6be5e5d6aea0e0c00b0ec95301ad 235 Pfam PF00005 ABC transporter 21 168 5.1E-31 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_01635 611711afe92b0eb0527eaaa90433cdf5 407 Gene3D G3DSA:1.10.10.2830 124 235 4.6E-37 T 31-10-2018 DY252_01635 611711afe92b0eb0527eaaa90433cdf5 407 SUPERFAMILY SSF110849 46 139 1.88E-27 T 31-10-2018 IPR036086 ParB/Sulfiredoxin superfamily DY252_01635 611711afe92b0eb0527eaaa90433cdf5 407 SUPERFAMILY SSF109709 130 234 1.18E-31 T 31-10-2018 DY252_01635 611711afe92b0eb0527eaaa90433cdf5 407 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 44 217 7.6E-60 T 31-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 DY252_01635 611711afe92b0eb0527eaaa90433cdf5 407 Gene3D G3DSA:3.90.1530.30 58 123 1.0E-26 T 31-10-2018 DY252_01635 611711afe92b0eb0527eaaa90433cdf5 407 Pfam PF02195 ParB-like nuclease domain 47 136 8.5E-27 T 31-10-2018 IPR003115 ParB/Sulfiredoxin DY252_01635 611711afe92b0eb0527eaaa90433cdf5 407 SMART SM00470 45 137 2.4E-33 T 31-10-2018 IPR003115 ParB/Sulfiredoxin DY252_03965 a8ba0c67f770c801a9097aa7f7b9d510 232 SMART SM00862 150 226 8.6E-29 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_03965 a8ba0c67f770c801a9097aa7f7b9d510 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 226 5.0E-28 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_03965 a8ba0c67f770c801a9097aa7f7b9d510 232 SUPERFAMILY SSF52172 2 129 3.7E-46 T 31-10-2018 IPR011006 CheY-like superfamily DY252_03965 a8ba0c67f770c801a9097aa7f7b9d510 232 Pfam PF00072 Response regulator receiver domain 5 117 5.6E-32 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_03965 a8ba0c67f770c801a9097aa7f7b9d510 232 SMART SM00448 3 116 2.0E-48 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_03965 a8ba0c67f770c801a9097aa7f7b9d510 232 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 227 9.2E-101 T 31-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 DY252_03965 a8ba0c67f770c801a9097aa7f7b9d510 232 Gene3D G3DSA:1.10.10.10 129 232 6.5E-36 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_03965 a8ba0c67f770c801a9097aa7f7b9d510 232 SUPERFAMILY SSF46894 127 226 2.3E-31 T 31-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DY252_03965 a8ba0c67f770c801a9097aa7f7b9d510 232 Gene3D G3DSA:3.40.50.2300 1 128 3.7E-41 T 31-10-2018 DY252_04780 7bcc029d7b9f15a642698358f82859dc 219 Pfam PF07298 NnrU protein 4 213 6.0E-43 T 31-10-2018 IPR009915 NnrU domain DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 SUPERFAMILY SSF81886 613 889 7.59E-78 T 31-10-2018 IPR036266 SecA, Wing/Scaffold superfamily DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 Pfam PF01043 SecA preprotein cross-linking domain 232 345 4.3E-40 T 31-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 SMART SM00957 6 389 4.0E-302 T 31-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 PRINTS PR00906 SecA protein signature 326 348 5.9E-69 T 31-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 PRINTS PR00906 SecA protein signature 170 190 5.9E-69 T 31-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 PRINTS PR00906 SecA protein signature 101 115 5.9E-69 T 31-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 PRINTS PR00906 SecA protein signature 363 380 5.9E-69 T 31-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 PRINTS PR00906 SecA protein signature 63 87 5.9E-69 T 31-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 PRINTS PR00906 SecA protein signature 117 127 5.9E-69 T 31-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 PRINTS PR00906 SecA protein signature 400 413 5.9E-69 T 31-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 Pfam PF07517 SecA DEAD-like domain 7 389 8.7E-134 T 31-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 SUPERFAMILY SSF81767 227 355 9.29E-45 T 31-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 Gene3D G3DSA:3.40.50.300 23 402 2.6E-180 T 31-10-2018 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 Gene3D G3DSA:1.10.3060.10 614 825 1.5E-72 T 31-10-2018 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 SUPERFAMILY SSF52540 403 611 6.36E-57 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 Pfam PF02810 SEC-C motif 881 899 1.1E-9 T 31-10-2018 IPR004027 SEC-C motif DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 Pfam PF07516 SecA Wing and Scaffold domain 610 821 7.5E-65 T 31-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 Gene3D G3DSA:3.10.450.50 837 900 4.2E-7 T 31-10-2018 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 808 0.0 T 31-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 ProSitePatterns PS01312 SecA family signature. 487 502 - T 31-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 SUPERFAMILY SSF52540 6 402 1.89E-86 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 SMART SM00958 228 345 1.8E-76 T 31-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 824 20.301 T 31-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 Gene3D G3DSA:3.40.50.300 404 612 6.1E-89 T 31-10-2018 DY252_03765 102c1cc06f2d352a0b7e3b9d6b65003f 901 Gene3D G3DSA:3.90.1440.10 229 355 2.6E-180 T 31-10-2018 DY252_10870 a652a425691828f4fcfce08b8238c0a9 348 SUPERFAMILY SSF51735 5 173 5.29E-55 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_10870 a652a425691828f4fcfce08b8238c0a9 348 SMART SM00859 7 144 4.5E-50 T 31-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DY252_10870 a652a425691828f4fcfce08b8238c0a9 348 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 144 6.9E-29 T 31-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DY252_10870 a652a425691828f4fcfce08b8238c0a9 348 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 161 319 6.9E-19 T 31-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DY252_10870 a652a425691828f4fcfce08b8238c0a9 348 SUPERFAMILY SSF55347 152 316 8.72E-54 T 31-10-2018 DY252_10870 a652a425691828f4fcfce08b8238c0a9 348 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 6 348 8.6E-129 T 31-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DY252_10870 a652a425691828f4fcfce08b8238c0a9 348 Gene3D G3DSA:3.30.360.10 150 316 4.9E-134 T 31-10-2018 DY252_10870 a652a425691828f4fcfce08b8238c0a9 348 Gene3D G3DSA:3.40.50.720 7 334 4.9E-134 T 31-10-2018 DY252_10870 a652a425691828f4fcfce08b8238c0a9 348 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 6 342 41.998 T 31-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DY252_10230 38134f48efcba9a758b8a425af476385 326 Pfam PF13378 Enolase C-terminal domain-like 143 322 1.1E-24 T 31-10-2018 IPR029065 Enolase C-terminal domain-like DY252_10230 38134f48efcba9a758b8a425af476385 326 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 5 112 2.0E-12 T 31-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DY252_10230 38134f48efcba9a758b8a425af476385 326 SUPERFAMILY SSF51604 117 326 5.63E-49 T 31-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DY252_10230 38134f48efcba9a758b8a425af476385 326 Gene3D G3DSA:3.30.390.10 2 104 8.5E-30 T 31-10-2018 IPR029017 Enolase-like, N-terminal DY252_10230 38134f48efcba9a758b8a425af476385 326 Gene3D G3DSA:3.20.20.120 105 326 2.1E-51 T 31-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DY252_10230 38134f48efcba9a758b8a425af476385 326 SUPERFAMILY SSF54826 3 112 7.88E-32 T 31-10-2018 DY252_10230 38134f48efcba9a758b8a425af476385 326 SMART SM00922 130 221 1.6E-16 T 31-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DY252_10230 38134f48efcba9a758b8a425af476385 326 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 171 202 - T 31-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 DY252_13250 71dec36878e8e9d63053548af7c65111 344 Pfam PF00591 Glycosyl transferase family, a/b domain 78 327 6.2E-100 T 31-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_13250 71dec36878e8e9d63053548af7c65111 344 SUPERFAMILY SSF47648 8 71 2.62E-19 T 31-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_13250 71dec36878e8e9d63053548af7c65111 344 SUPERFAMILY SSF52418 78 340 4.06E-94 T 31-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_13250 71dec36878e8e9d63053548af7c65111 344 Gene3D G3DSA:3.40.1030.10 75 342 1.7E-107 T 31-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_13250 71dec36878e8e9d63053548af7c65111 344 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 9 337 38.151 T 31-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 DY252_13250 71dec36878e8e9d63053548af7c65111 344 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 70 2.6E-21 T 31-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_13250 71dec36878e8e9d63053548af7c65111 344 Gene3D G3DSA:1.20.970.10 1 73 3.6E-26 T 31-10-2018 DY252_13250 71dec36878e8e9d63053548af7c65111 344 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 12 335 2.4E-121 T 31-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 DY252_13420 f0e366cfd94e2edae45bc78cb13daa79 264 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 247 7.5E-69 T 31-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DY252_13420 f0e366cfd94e2edae45bc78cb13daa79 264 Gene3D G3DSA:3.30.420.40 1 88 2.9E-29 T 31-10-2018 DY252_13420 f0e366cfd94e2edae45bc78cb13daa79 264 SUPERFAMILY SSF53067 1 123 4.81E-34 T 31-10-2018 DY252_13420 f0e366cfd94e2edae45bc78cb13daa79 264 Pfam PF03309 Type III pantothenate kinase 2 206 2.2E-71 T 31-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DY252_13420 f0e366cfd94e2edae45bc78cb13daa79 264 SUPERFAMILY SSF53067 124 255 9.39E-38 T 31-10-2018 DY252_13420 f0e366cfd94e2edae45bc78cb13daa79 264 Gene3D G3DSA:3.30.420.40 90 263 3.4E-57 T 31-10-2018 DY252_13420 f0e366cfd94e2edae45bc78cb13daa79 264 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 256 36.401 T 31-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DY252_04760 7bea2c091ebb5a92e9d39ea61c433149 266 SUPERFAMILY SSF51182 13 192 7.88E-24 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_04760 7bea2c091ebb5a92e9d39ea61c433149 266 Pfam PF12833 Helix-turn-helix domain 189 266 2.9E-25 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_04760 7bea2c091ebb5a92e9d39ea61c433149 266 SMART SM00342 183 265 3.3E-26 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_04760 7bea2c091ebb5a92e9d39ea61c433149 266 Gene3D G3DSA:1.10.10.60 167 266 6.7E-26 T 31-10-2018 DY252_04760 7bea2c091ebb5a92e9d39ea61c433149 266 Gene3D G3DSA:2.60.120.10 15 102 7.4E-12 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_04760 7bea2c091ebb5a92e9d39ea61c433149 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 265 3.9E-5 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_04760 7bea2c091ebb5a92e9d39ea61c433149 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 234 249 3.9E-5 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_04760 7bea2c091ebb5a92e9d39ea61c433149 266 SUPERFAMILY SSF46689 219 264 2.55E-9 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_04760 7bea2c091ebb5a92e9d39ea61c433149 266 Pfam PF07883 Cupin domain 34 97 5.5E-7 T 31-10-2018 IPR013096 Cupin 2, conserved barrel DY252_04760 7bea2c091ebb5a92e9d39ea61c433149 266 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 220 261 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_12890 f666f40e0e582a2ffd97c9db195d4d69 424 Gene3D G3DSA:3.90.1150.10 13 395 4.1E-185 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_12890 f666f40e0e582a2ffd97c9db195d4d69 424 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 225 241 - T 31-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DY252_12890 f666f40e0e582a2ffd97c9db195d4d69 424 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 10 424 53.698 T 31-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DY252_12890 f666f40e0e582a2ffd97c9db195d4d69 424 Gene3D G3DSA:3.40.640.10 40 291 4.1E-185 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_12890 f666f40e0e582a2ffd97c9db195d4d69 424 Pfam PF00464 Serine hydroxymethyltransferase 11 388 1.4E-174 T 31-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DY252_12890 f666f40e0e582a2ffd97c9db195d4d69 424 SUPERFAMILY SSF53383 4 423 3.36E-184 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_12890 f666f40e0e582a2ffd97c9db195d4d69 424 PIRSF PIRSF000412 4 424 2.1E-169 T 31-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 Pfam PF00117 Glutamine amidotransferase class-I 204 380 2.6E-49 T 31-10-2018 IPR017926 Glutamine amidotransferase DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 SUPERFAMILY SSF52021 13 158 1.23E-53 T 31-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 PRINTS PR00096 Glutamine amidotransferase superfamily signature 273 284 1.6E-12 T 31-10-2018 DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 PRINTS PR00096 Glutamine amidotransferase superfamily signature 244 253 1.6E-12 T 31-10-2018 DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 PRINTS PR00096 Glutamine amidotransferase superfamily signature 358 371 1.6E-12 T 31-10-2018 DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 Gene3D G3DSA:3.50.30.20 12 162 4.0E-53 T 31-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 SUPERFAMILY SSF52317 167 385 3.75E-62 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 290 307 5.9E-39 T 31-10-2018 DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 315 326 5.9E-39 T 31-10-2018 DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 202 216 5.9E-39 T 31-10-2018 DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 241 255 5.9E-39 T 31-10-2018 DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 273 289 5.9E-39 T 31-10-2018 DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 12 387 47.508 T 31-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 14 384 3.0E-138 T 31-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 PRINTS PR00097 Anthranilate synthase component II signature 244 253 4.7E-7 T 31-10-2018 DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 PRINTS PR00097 Anthranilate synthase component II signature 273 284 4.7E-7 T 31-10-2018 DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 PRINTS PR00097 Anthranilate synthase component II signature 358 371 4.7E-7 T 31-10-2018 DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 Gene3D G3DSA:3.40.50.880 163 387 6.6E-73 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 14 141 4.5E-48 T 31-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05540 d1fff6c7305bd1d46341ca309ef6df3f 388 SMART SM01097 12 142 8.5E-84 T 31-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_09450 9fde42285d864b512bb1c10fc028be48 166 SUPERFAMILY SSF50630 25 160 9.0E-41 T 31-10-2018 IPR021109 Aspartic peptidase domain superfamily DY252_09450 9fde42285d864b512bb1c10fc028be48 166 Pfam PF05618 Putative ATP-dependant zinc protease 25 162 7.3E-31 T 31-10-2018 DY252_09450 9fde42285d864b512bb1c10fc028be48 166 Gene3D G3DSA:2.40.70.10 23 152 1.5E-32 T 31-10-2018 IPR021109 Aspartic peptidase domain superfamily DY252_05185 3cc654ad231e8a13a44e4911b5030b76 303 PIRSF PIRSF000166 1 303 2.6E-116 T 31-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DY252_05185 3cc654ad231e8a13a44e4911b5030b76 303 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 193 217 - T 31-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DY252_05185 3cc654ad231e8a13a44e4911b5030b76 303 Gene3D G3DSA:3.40.1500.10 13 303 2.3E-108 T 31-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DY252_05185 3cc654ad231e8a13a44e4911b5030b76 303 PRINTS PR00073 Coprogen oxidase signature 288 303 1.8E-53 T 31-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DY252_05185 3cc654ad231e8a13a44e4911b5030b76 303 PRINTS PR00073 Coprogen oxidase signature 152 174 1.8E-53 T 31-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DY252_05185 3cc654ad231e8a13a44e4911b5030b76 303 PRINTS PR00073 Coprogen oxidase signature 260 287 1.8E-53 T 31-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DY252_05185 3cc654ad231e8a13a44e4911b5030b76 303 PRINTS PR00073 Coprogen oxidase signature 64 80 1.8E-53 T 31-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DY252_05185 3cc654ad231e8a13a44e4911b5030b76 303 PRINTS PR00073 Coprogen oxidase signature 81 102 1.8E-53 T 31-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DY252_05185 3cc654ad231e8a13a44e4911b5030b76 303 PRINTS PR00073 Coprogen oxidase signature 189 218 1.8E-53 T 31-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DY252_05185 3cc654ad231e8a13a44e4911b5030b76 303 SUPERFAMILY SSF102886 27 303 3.01E-113 T 31-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DY252_05185 3cc654ad231e8a13a44e4911b5030b76 303 Pfam PF01218 Coproporphyrinogen III oxidase 34 302 1.4E-97 T 31-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DY252_05185 3cc654ad231e8a13a44e4911b5030b76 303 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 26 303 51.112 T 31-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DY252_11080 0bf5f7025314438df0e3f2b5bed42544 374 Gene3D G3DSA:3.40.50.1820 57 342 5.3E-30 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_11080 0bf5f7025314438df0e3f2b5bed42544 374 SUPERFAMILY SSF53474 44 325 3.55E-28 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_11080 0bf5f7025314438df0e3f2b5bed42544 374 Pfam PF12146 Serine aminopeptidase, S33 101 322 9.9E-9 T 31-10-2018 IPR022742 Serine aminopeptidase, S33 DY252_00990 7ddeda074f9c1bc4a4c60ff82f18d032 153 Gene3D G3DSA:3.30.300.20 1 150 1.5E-43 T 31-10-2018 IPR015946 K homology domain-like, alpha/beta DY252_00990 7ddeda074f9c1bc4a4c60ff82f18d032 153 Pfam PF02566 OsmC-like protein 55 147 1.4E-11 T 31-10-2018 IPR003718 OsmC/Ohr family DY252_00990 7ddeda074f9c1bc4a4c60ff82f18d032 153 SUPERFAMILY SSF82784 1 151 4.84E-42 T 31-10-2018 IPR036102 OsmC/Ohr superfamily DY252_08990 3f81535063d158e9b8277210bd67286d 92 Gene3D G3DSA:3.30.860.10 1 92 2.7E-38 T 31-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_08990 3f81535063d158e9b8277210bd67286d 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.6E-22 T 31-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_08990 3f81535063d158e9b8277210bd67286d 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.6E-22 T 31-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_08990 3f81535063d158e9b8277210bd67286d 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.6E-22 T 31-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_08990 3f81535063d158e9b8277210bd67286d 92 SUPERFAMILY SSF54570 3 84 7.59E-35 T 31-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_08990 3f81535063d158e9b8277210bd67286d 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 31-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_08990 3f81535063d158e9b8277210bd67286d 92 PIRSF PIRSF002144 1 92 1.5E-33 T 31-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_08990 3f81535063d158e9b8277210bd67286d 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.914 T 31-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_08990 3f81535063d158e9b8277210bd67286d 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 7.5E-42 T 31-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 DY252_08990 3f81535063d158e9b8277210bd67286d 92 Pfam PF00203 Ribosomal protein S19 3 83 1.5E-35 T 31-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_00200 37b8dbfdbc31a090505dbc10cf3a4c05 348 Gene3D G3DSA:3.40.800.20 1 341 2.6E-115 T 31-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_00200 37b8dbfdbc31a090505dbc10cf3a4c05 348 PRINTS PR01270 Histone deacetylase superfamily signature 154 177 9.4E-13 T 31-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_00200 37b8dbfdbc31a090505dbc10cf3a4c05 348 PRINTS PR01270 Histone deacetylase superfamily signature 186 201 9.4E-13 T 31-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_00200 37b8dbfdbc31a090505dbc10cf3a4c05 348 PRINTS PR01270 Histone deacetylase superfamily signature 272 282 9.4E-13 T 31-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_00200 37b8dbfdbc31a090505dbc10cf3a4c05 348 Pfam PF00850 Histone deacetylase domain 28 335 1.4E-69 T 31-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_00200 37b8dbfdbc31a090505dbc10cf3a4c05 348 SUPERFAMILY SSF52768 5 344 1.06E-89 T 31-10-2018 IPR023696 Ureohydrolase domain superfamily DY252_00730 c2f78b4173eaa5ee5e36a6d66dcdf26d 556 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 361 543 8.3E-20 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_00730 c2f78b4173eaa5ee5e36a6d66dcdf26d 556 SUPERFAMILY SSF81343 8 180 1.7E-17 T 31-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_00730 c2f78b4173eaa5ee5e36a6d66dcdf26d 556 Gene3D G3DSA:3.30.70.1230 355 555 7.8E-39 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_00730 c2f78b4173eaa5ee5e36a6d66dcdf26d 556 SUPERFAMILY SSF55073 358 545 1.16E-37 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_00730 c2f78b4173eaa5ee5e36a6d66dcdf26d 556 SUPERFAMILY SSF54292 255 341 1.23E-22 T 31-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DY252_00730 c2f78b4173eaa5ee5e36a6d66dcdf26d 556 SMART SM00044 329 530 5.3E-4 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_00730 c2f78b4173eaa5ee5e36a6d66dcdf26d 556 Gene3D G3DSA:3.10.20.30 255 341 5.0E-19 T 31-10-2018 IPR012675 Beta-grasp domain superfamily DY252_00730 c2f78b4173eaa5ee5e36a6d66dcdf26d 556 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 258 332 1.6E-9 T 31-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DY252_08055 704f9ea5907422623e4eff2cc7d81dbd 213 Pfam PF07883 Cupin domain 145 206 3.1E-11 T 31-10-2018 IPR013096 Cupin 2, conserved barrel DY252_08055 704f9ea5907422623e4eff2cc7d81dbd 213 SMART SM00530 32 87 4.9E-17 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_08055 704f9ea5907422623e4eff2cc7d81dbd 213 SUPERFAMILY SSF51182 94 207 3.96E-24 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_08055 704f9ea5907422623e4eff2cc7d81dbd 213 Pfam PF01381 Helix-turn-helix 33 87 1.5E-16 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_08055 704f9ea5907422623e4eff2cc7d81dbd 213 Gene3D G3DSA:2.60.120.10 96 206 4.0E-19 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_08055 704f9ea5907422623e4eff2cc7d81dbd 213 SUPERFAMILY SSF47413 26 94 1.18E-18 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_08055 704f9ea5907422623e4eff2cc7d81dbd 213 Gene3D G3DSA:1.10.260.40 11 94 1.2E-19 T 31-10-2018 DY252_15960 c59f966d1cec9f203b99519c589e57d6 222 Pfam PF07729 FCD domain 84 207 5.1E-29 T 31-10-2018 IPR011711 GntR, C-terminal DY252_15960 c59f966d1cec9f203b99519c589e57d6 222 Gene3D G3DSA:1.10.10.10 2 75 8.0E-21 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_15960 c59f966d1cec9f203b99519c589e57d6 222 Gene3D G3DSA:1.20.120.530 78 221 5.1E-33 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_15960 c59f966d1cec9f203b99519c589e57d6 222 SMART SM00345 16 74 7.2E-18 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_15960 c59f966d1cec9f203b99519c589e57d6 222 SMART SM00895 84 208 3.4E-25 T 31-10-2018 IPR011711 GntR, C-terminal DY252_15960 c59f966d1cec9f203b99519c589e57d6 222 SUPERFAMILY SSF48008 80 216 6.54E-31 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_15960 c59f966d1cec9f203b99519c589e57d6 222 SUPERFAMILY SSF46785 7 78 2.09E-18 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_15960 c59f966d1cec9f203b99519c589e57d6 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 3.5E-17 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_18930 afcf6b692b2fe3f1376da441abf24e7f 854 Pfam PF02653 Branched-chain amino acid transport system / permease component 44 305 1.2E-32 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_18930 afcf6b692b2fe3f1376da441abf24e7f 854 Gene3D G3DSA:3.40.50.300 603 839 6.7E-60 T 31-10-2018 DY252_18930 afcf6b692b2fe3f1376da441abf24e7f 854 ProSitePatterns PS00211 ABC transporters family signature. 739 753 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_18930 afcf6b692b2fe3f1376da441abf24e7f 854 Gene3D G3DSA:3.40.50.300 338 584 1.6E-55 T 31-10-2018 DY252_18930 afcf6b692b2fe3f1376da441abf24e7f 854 SUPERFAMILY SSF52540 605 836 1.85E-55 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18930 afcf6b692b2fe3f1376da441abf24e7f 854 SMART SM00382 631 837 1.5E-7 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_18930 afcf6b692b2fe3f1376da441abf24e7f 854 SMART SM00382 372 564 4.4E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_18930 afcf6b692b2fe3f1376da441abf24e7f 854 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 570 586 4.9E-6 T 31-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DY252_18930 afcf6b692b2fe3f1376da441abf24e7f 854 SUPERFAMILY SSF52540 348 586 7.04E-55 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18930 afcf6b692b2fe3f1376da441abf24e7f 854 Pfam PF00005 ABC transporter 622 766 7.1E-31 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_18930 afcf6b692b2fe3f1376da441abf24e7f 854 Pfam PF00005 ABC transporter 364 515 5.8E-24 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_14545 60a0e4b5958c078f8dabd9a7f98074a2 544 SMART SM00267 360 532 1.1E-43 T 31-10-2018 IPR000160 GGDEF domain DY252_14545 60a0e4b5958c078f8dabd9a7f98074a2 544 Pfam PF00990 Diguanylate cyclase, GGDEF domain 371 527 1.8E-38 T 31-10-2018 IPR000160 GGDEF domain DY252_14545 60a0e4b5958c078f8dabd9a7f98074a2 544 Gene3D G3DSA:3.30.450.20 118 248 2.7E-15 T 31-10-2018 DY252_14545 60a0e4b5958c078f8dabd9a7f98074a2 544 Gene3D G3DSA:3.30.450.20 249 368 7.2E-11 T 31-10-2018 DY252_14545 60a0e4b5958c078f8dabd9a7f98074a2 544 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 130 245 8.2E-7 T 31-10-2018 IPR000014 PAS domain DY252_14545 60a0e4b5958c078f8dabd9a7f98074a2 544 SUPERFAMILY SSF55785 236 358 5.93E-10 T 31-10-2018 IPR035965 PAS domain superfamily DY252_14545 60a0e4b5958c078f8dabd9a7f98074a2 544 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 367 530 1.6E-35 T 31-10-2018 IPR000160 GGDEF domain DY252_14545 60a0e4b5958c078f8dabd9a7f98074a2 544 SUPERFAMILY SSF55785 115 231 9.07E-13 T 31-10-2018 IPR035965 PAS domain superfamily DY252_14545 60a0e4b5958c078f8dabd9a7f98074a2 544 Pfam PF08448 PAS fold 133 239 1.9E-10 T 31-10-2018 IPR013656 PAS fold-4 DY252_14545 60a0e4b5958c078f8dabd9a7f98074a2 544 SMART SM00091 251 316 1.5 T 31-10-2018 IPR000014 PAS domain DY252_14545 60a0e4b5958c078f8dabd9a7f98074a2 544 SMART SM00091 126 192 0.0022 T 31-10-2018 IPR000014 PAS domain DY252_14545 60a0e4b5958c078f8dabd9a7f98074a2 544 Pfam PF13426 PAS domain 264 358 0.35 T 31-10-2018 IPR000014 PAS domain DY252_14545 60a0e4b5958c078f8dabd9a7f98074a2 544 Gene3D G3DSA:3.30.70.270 369 543 3.2E-52 T 31-10-2018 DY252_14545 60a0e4b5958c078f8dabd9a7f98074a2 544 Pfam PF13188 PAS domain 7 51 0.049 T 31-10-2018 IPR000014 PAS domain DY252_14545 60a0e4b5958c078f8dabd9a7f98074a2 544 SUPERFAMILY SSF55073 376 534 7.45E-43 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_14765 4bf9e070813474bf7a7fccac14d326df 407 Pfam PF00266 Aminotransferase class-V 9 370 2.6E-90 T 31-10-2018 IPR000192 Aminotransferase class V domain DY252_14765 4bf9e070813474bf7a7fccac14d326df 407 Gene3D G3DSA:3.90.1150.10 9 378 1.8E-160 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_14765 4bf9e070813474bf7a7fccac14d326df 407 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 5 398 53.635 T 31-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 DY252_14765 4bf9e070813474bf7a7fccac14d326df 407 SUPERFAMILY SSF53383 7 394 8.68E-113 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_14765 4bf9e070813474bf7a7fccac14d326df 407 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 199 218 - T 31-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DY252_14765 4bf9e070813474bf7a7fccac14d326df 407 Gene3D G3DSA:3.40.640.10 20 264 1.8E-160 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_14765 4bf9e070813474bf7a7fccac14d326df 407 PIRSF PIRSF005572 6 387 1.8E-136 T 31-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DY252_14765 4bf9e070813474bf7a7fccac14d326df 407 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 7 407 2.5E-210 T 31-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 DY252_02145 501089456f95bd7628547b25d5c82e26 310 Gene3D G3DSA:3.40.190.290 96 306 2.1E-33 T 31-10-2018 DY252_02145 501089456f95bd7628547b25d5c82e26 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 64 2.0E-18 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_02145 501089456f95bd7628547b25d5c82e26 310 Pfam PF03466 LysR substrate binding domain 90 299 1.4E-34 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_02145 501089456f95bd7628547b25d5c82e26 310 Gene3D G3DSA:1.10.10.10 4 95 7.7E-21 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_02145 501089456f95bd7628547b25d5c82e26 310 SUPERFAMILY SSF46785 4 114 2.18E-20 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_02145 501089456f95bd7628547b25d5c82e26 310 SUPERFAMILY SSF53850 91 303 7.24E-35 T 31-10-2018 DY252_06930 2371f707a6133f9ad23843646098567e 193 SUPERFAMILY SSF52972 3 185 7.19E-58 T 31-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DY252_06930 2371f707a6133f9ad23843646098567e 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 183 1.5E-46 T 31-10-2018 IPR003697 Maf-like protein GO:0047429 DY252_06930 2371f707a6133f9ad23843646098567e 193 Gene3D G3DSA:3.90.950.10 2 192 6.8E-61 T 31-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DY252_06930 2371f707a6133f9ad23843646098567e 193 PIRSF PIRSF006305 1 191 2.5E-51 T 31-10-2018 IPR003697 Maf-like protein GO:0047429 DY252_06930 2371f707a6133f9ad23843646098567e 193 Hamap MF_00528 Septum formation protein Maf [maf]. 3 190 31.111 T 31-10-2018 IPR003697 Maf-like protein GO:0047429 DY252_06930 2371f707a6133f9ad23843646098567e 193 Pfam PF02545 Maf-like protein 3 184 3.4E-52 T 31-10-2018 IPR003697 Maf-like protein GO:0047429 DY252_03050 7e9401e85323eb8645e0e24ccb0efb43 343 Pfam PF00158 Sigma-54 interaction domain 17 179 3.4E-54 T 31-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DY252_03050 7e9401e85323eb8645e0e24ccb0efb43 343 Pfam PF02954 Bacterial regulatory protein, Fis family 297 336 8.0E-7 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_03050 7e9401e85323eb8645e0e24ccb0efb43 343 Gene3D G3DSA:1.10.10.60 281 340 3.0E-9 T 31-10-2018 DY252_03050 7e9401e85323eb8645e0e24ccb0efb43 343 Gene3D G3DSA:3.40.50.300 5 188 1.0E-53 T 31-10-2018 DY252_03050 7e9401e85323eb8645e0e24ccb0efb43 343 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 17 337 1.6E-141 T 31-10-2018 IPR014317 Transcription activator PspF DY252_03050 7e9401e85323eb8645e0e24ccb0efb43 343 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 231 240 - T 31-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DY252_03050 7e9401e85323eb8645e0e24ccb0efb43 343 SMART SM00382 37 189 5.7E-7 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_03050 7e9401e85323eb8645e0e24ccb0efb43 343 SUPERFAMILY SSF46689 231 339 1.16E-10 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_03050 7e9401e85323eb8645e0e24ccb0efb43 343 Gene3D G3DSA:1.10.8.60 189 273 7.8E-23 T 31-10-2018 DY252_03050 7e9401e85323eb8645e0e24ccb0efb43 343 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 303 320 1.8E-5 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_03050 7e9401e85323eb8645e0e24ccb0efb43 343 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 320 340 1.8E-5 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_03050 7e9401e85323eb8645e0e24ccb0efb43 343 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 103 118 - T 31-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DY252_03050 7e9401e85323eb8645e0e24ccb0efb43 343 SUPERFAMILY SSF52540 17 259 1.57E-61 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 SUPERFAMILY SSF56784 582 890 1.03E-61 T 31-10-2018 IPR036412 HAD-like superfamily DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 354 861 5.4E-91 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 315 892 7.2E-189 T 31-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 Pfam PF00403 Heavy-metal-associated domain 155 212 2.5E-18 T 31-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 Pfam PF00403 Heavy-metal-associated domain 81 139 1.6E-15 T 31-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 Pfam PF00403 Heavy-metal-associated domain 7 66 3.8E-16 T 31-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 297 893 3.4E-177 T 31-10-2018 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 ProSitePatterns PS01047 Heavy-metal-associated domain. 157 186 - T 31-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 Pfam PF00122 E1-E2 ATPase 383 562 2.4E-57 T 31-10-2018 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 SUPERFAMILY SSF55008 152 216 3.4E-20 T 31-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 Gene3D G3DSA:3.30.70.100 144 225 1.5E-22 T 31-10-2018 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 80 141 4.6E-10 T 31-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 6 67 7.6E-9 T 31-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 154 213 2.7E-9 T 31-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 Gene3D G3DSA:3.40.50.1000 565 835 3.9E-91 T 31-10-2018 IPR023214 HAD superfamily DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 586 592 - T 31-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 ProSitePatterns PS01047 Heavy-metal-associated domain. 83 112 - T 31-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 SUPERFAMILY SSF81665 332 872 2.62E-12 T 31-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 31-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 Gene3D G3DSA:3.30.70.100 5 69 1.4E-20 T 31-10-2018 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 783 802 7.9E-29 T 31-10-2018 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 432 446 7.9E-29 T 31-10-2018 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 708 719 7.9E-29 T 31-10-2018 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 730 740 7.9E-29 T 31-10-2018 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 598 7.9E-29 T 31-10-2018 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 806 818 7.9E-29 T 31-10-2018 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 SUPERFAMILY SSF55008 77 142 1.44E-18 T 31-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 SUPERFAMILY SSF81653 386 482 6.67E-30 T 31-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 814 839 1.7E-8 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 783 799 1.7E-8 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 755 771 1.7E-8 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 Gene3D G3DSA:3.30.70.100 78 143 1.5E-19 T 31-10-2018 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 Pfam PF00702 haloacid dehalogenase-like hydrolase 581 797 9.0E-43 T 31-10-2018 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 Gene3D G3DSA:2.70.150.20 375 487 9.6E-43 T 31-10-2018 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 Gene3D G3DSA:3.40.1110.10 595 715 3.9E-91 T 31-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DY252_20860 cf220e2addf12e051f0d06695d86b6c4 899 SUPERFAMILY SSF55008 5 67 2.49E-19 T 31-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DY252_04465 8cb0830ffa86b850bcffb28e712d42c6 162 Gene3D G3DSA:2.40.50.140 35 143 1.8E-40 T 31-10-2018 DY252_04465 8cb0830ffa86b850bcffb28e712d42c6 162 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 7 147 33.002 T 31-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 DY252_04465 8cb0830ffa86b850bcffb28e712d42c6 162 Pfam PF03100 CcmE 10 137 5.3E-47 T 31-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 DY252_04465 8cb0830ffa86b850bcffb28e712d42c6 162 SUPERFAMILY SSF82093 35 143 9.29E-41 T 31-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 DY252_18895 80870dbbec65c3d8f6f21f1b38d3d535 153 Pfam PF01799 [2Fe-2S] binding domain 73 145 1.9E-22 T 31-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 DY252_18895 80870dbbec65c3d8f6f21f1b38d3d535 153 Gene3D G3DSA:3.10.20.30 1 76 1.0E-27 T 31-10-2018 IPR012675 Beta-grasp domain superfamily DY252_18895 80870dbbec65c3d8f6f21f1b38d3d535 153 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 67 3.3E-9 T 31-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DY252_18895 80870dbbec65c3d8f6f21f1b38d3d535 153 Gene3D G3DSA:1.10.150.120 77 153 1.2E-22 T 31-10-2018 DY252_18895 80870dbbec65c3d8f6f21f1b38d3d535 153 SUPERFAMILY SSF54292 2 77 9.31E-27 T 31-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DY252_18895 80870dbbec65c3d8f6f21f1b38d3d535 153 SUPERFAMILY SSF47741 78 151 4.84E-27 T 31-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily DY252_18895 80870dbbec65c3d8f6f21f1b38d3d535 153 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 31-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DY252_06435 87b911feb3ecdef32dfae6344ee028d4 551 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 336 1.1E-125 T 31-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 DY252_06435 87b911feb3ecdef32dfae6344ee028d4 551 PRINTS PR00423 Cell division protein FtsZ signature 131 152 3.8E-51 T 31-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DY252_06435 87b911feb3ecdef32dfae6344ee028d4 551 PRINTS PR00423 Cell division protein FtsZ signature 217 238 3.8E-51 T 31-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DY252_06435 87b911feb3ecdef32dfae6344ee028d4 551 PRINTS PR00423 Cell division protein FtsZ signature 103 123 3.8E-51 T 31-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DY252_06435 87b911feb3ecdef32dfae6344ee028d4 551 PRINTS PR00423 Cell division protein FtsZ signature 194 216 3.8E-51 T 31-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DY252_06435 87b911feb3ecdef32dfae6344ee028d4 551 Gene3D G3DSA:3.30.1330.20 226 335 3.8E-37 T 31-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 DY252_06435 87b911feb3ecdef32dfae6344ee028d4 551 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 14 360 37.749 T 31-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 DY252_06435 87b911feb3ecdef32dfae6344ee028d4 551 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 18 179 5.2E-42 T 31-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DY252_06435 87b911feb3ecdef32dfae6344ee028d4 551 SMART SM00864 18 210 2.8E-112 T 31-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DY252_06435 87b911feb3ecdef32dfae6344ee028d4 551 ProSitePatterns PS01134 FtsZ protein signature 1. 49 83 - T 31-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 DY252_06435 87b911feb3ecdef32dfae6344ee028d4 551 ProSitePatterns PS01135 FtsZ protein signature 2. 102 123 - T 31-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 DY252_06435 87b911feb3ecdef32dfae6344ee028d4 551 Pfam PF12327 FtsZ family, C-terminal domain 227 322 8.7E-37 T 31-10-2018 IPR024757 Cell division protein FtsZ, C-terminal DY252_06435 87b911feb3ecdef32dfae6344ee028d4 551 SMART SM00865 212 330 2.9E-58 T 31-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 DY252_06435 87b911feb3ecdef32dfae6344ee028d4 551 SUPERFAMILY SSF52490 17 213 6.15E-70 T 31-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 DY252_06435 87b911feb3ecdef32dfae6344ee028d4 551 SUPERFAMILY SSF55307 209 324 1.19E-41 T 31-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 DY252_06435 87b911feb3ecdef32dfae6344ee028d4 551 Gene3D G3DSA:3.40.50.1440 8 225 5.1E-82 T 31-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 DY252_05405 c1921f34c75ef3ac89d6cbe9d2f68861 498 Pfam PF00512 His Kinase A (phospho-acceptor) domain 278 333 8.2E-7 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_05405 c1921f34c75ef3ac89d6cbe9d2f68861 498 SUPERFAMILY SSF47384 258 335 1.47E-8 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_05405 c1921f34c75ef3ac89d6cbe9d2f68861 498 Pfam PF08521 Two-component sensor kinase N-terminal 59 199 2.2E-32 T 31-10-2018 IPR013727 Two-component sensor kinase, N-terminal DY252_05405 c1921f34c75ef3ac89d6cbe9d2f68861 498 Gene3D G3DSA:1.10.287.130 228 340 4.1E-11 T 31-10-2018 DY252_05405 c1921f34c75ef3ac89d6cbe9d2f68861 498 SMART SM00388 275 340 2.7E-5 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_05405 c1921f34c75ef3ac89d6cbe9d2f68861 498 SUPERFAMILY SSF55874 371 491 3.01E-27 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_05405 c1921f34c75ef3ac89d6cbe9d2f68861 498 SMART SM00387 389 494 2.3E-23 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_05405 c1921f34c75ef3ac89d6cbe9d2f68861 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 472 6.3E-5 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_05405 c1921f34c75ef3ac89d6cbe9d2f68861 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 440 6.3E-5 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_05405 c1921f34c75ef3ac89d6cbe9d2f68861 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 390 491 2.3E-17 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_05405 c1921f34c75ef3ac89d6cbe9d2f68861 498 Gene3D G3DSA:3.30.565.10 347 495 4.4E-25 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_17060 2f62ce66c50cbeaaca0323ac5ab6147a 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 55 355 8.1E-46 T 31-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DY252_17060 2f62ce66c50cbeaaca0323ac5ab6147a 391 Gene3D G3DSA:2.40.420.20 286 353 2.4E-51 T 31-10-2018 DY252_17060 2f62ce66c50cbeaaca0323ac5ab6147a 391 Gene3D G3DSA:2.40.50.100 76 204 2.4E-51 T 31-10-2018 DY252_17060 2f62ce66c50cbeaaca0323ac5ab6147a 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 79 275 1.4E-19 T 31-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DY252_17060 2f62ce66c50cbeaaca0323ac5ab6147a 391 SUPERFAMILY SSF111369 67 281 9.29E-31 T 31-10-2018 DY252_17060 2f62ce66c50cbeaaca0323ac5ab6147a 391 Gene3D G3DSA:2.40.30.170 66 285 2.4E-51 T 31-10-2018 DY252_17060 2f62ce66c50cbeaaca0323ac5ab6147a 391 Gene3D G3DSA:1.10.287.470 111 170 2.4E-51 T 31-10-2018 DY252_19775 d72bd031dedf08c5e4a6ae4d76fb7e25 601 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 125 244 6.7E-24 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_19775 d72bd031dedf08c5e4a6ae4d76fb7e25 601 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 318 563 1.3E-17 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_19775 d72bd031dedf08c5e4a6ae4d76fb7e25 601 SUPERFAMILY SSF53850 309 566 1.43E-30 T 31-10-2018 DY252_19775 d72bd031dedf08c5e4a6ae4d76fb7e25 601 SMART SM00062 317 565 1.0E-14 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_19775 d72bd031dedf08c5e4a6ae4d76fb7e25 601 SUPERFAMILY SSF58104 64 281 2.49E-32 T 31-10-2018 DY252_19775 d72bd031dedf08c5e4a6ae4d76fb7e25 601 Gene3D G3DSA:3.40.190.10 322 561 5.2E-23 T 31-10-2018 DY252_19775 d72bd031dedf08c5e4a6ae4d76fb7e25 601 Gene3D G3DSA:3.40.190.10 408 520 5.2E-23 T 31-10-2018 DY252_19775 d72bd031dedf08c5e4a6ae4d76fb7e25 601 Gene3D G3DSA:1.10.287.950 17 299 4.4E-37 T 31-10-2018 DY252_19775 d72bd031dedf08c5e4a6ae4d76fb7e25 601 SMART SM00283 37 310 3.3E-5 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_20105 f6459b45819763d8e704663d4b972f93 703 Gene3D G3DSA:1.10.287.950 369 681 1.3E-46 T 31-10-2018 DY252_20105 f6459b45819763d8e704663d4b972f93 703 Gene3D G3DSA:1.10.8.500 320 368 6.1E-9 T 31-10-2018 DY252_20105 f6459b45819763d8e704663d4b972f93 703 SMART SM00283 410 657 4.1E-28 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_20105 f6459b45819763d8e704663d4b972f93 703 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 473 635 8.7E-30 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_20105 f6459b45819763d8e704663d4b972f93 703 SUPERFAMILY SSF58104 347 658 5.36E-49 T 31-10-2018 DY252_20105 f6459b45819763d8e704663d4b972f93 703 SMART SM00304 409 472 48.0 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_20105 f6459b45819763d8e704663d4b972f93 703 SMART SM00304 320 373 0.031 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_00035 c266356b50a13b35dfcc19a126c37308 400 Gene3D G3DSA:3.40.350.10 4 154 3.0E-42 T 31-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DY252_00035 c266356b50a13b35dfcc19a126c37308 400 Pfam PF01321 Creatinase/Prolidase N-terminal domain 26 155 4.6E-10 T 31-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 DY252_00035 c266356b50a13b35dfcc19a126c37308 400 SUPERFAMILY SSF55920 157 395 9.03E-61 T 31-10-2018 IPR036005 Creatinase/aminopeptidase-like DY252_00035 c266356b50a13b35dfcc19a126c37308 400 Pfam PF00557 Metallopeptidase family M24 164 381 1.1E-26 T 31-10-2018 IPR000994 Peptidase M24 DY252_00035 c266356b50a13b35dfcc19a126c37308 400 SUPERFAMILY SSF53092 6 154 1.74E-39 T 31-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DY252_00035 c266356b50a13b35dfcc19a126c37308 400 Gene3D G3DSA:3.90.230.10 156 400 7.5E-55 T 31-10-2018 DY252_03055 7da86a2eb1b10c69916d1c218d964f31 225 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 2.2E-85 T 31-10-2018 IPR014319 Phage shock protein, PspA DY252_03055 7da86a2eb1b10c69916d1c218d964f31 225 Pfam PF04012 PspA/IM30 family 2 216 2.0E-38 T 31-10-2018 IPR007157 PspA/IM30 DY252_03055 7da86a2eb1b10c69916d1c218d964f31 225 SUPERFAMILY SSF57997 103 217 3.6E-5 T 31-10-2018 DY252_04945 7c36d6216ea2b7f681a0063d0df4b8a7 207 SUPERFAMILY SSF52317 4 203 2.07E-47 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_04945 7c36d6216ea2b7f681a0063d0df4b8a7 207 Gene3D G3DSA:3.40.50.880 1 207 2.4E-65 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_04945 7c36d6216ea2b7f681a0063d0df4b8a7 207 PIRSF PIRSF000495 2 207 2.9E-68 T 31-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DY252_04945 7c36d6216ea2b7f681a0063d0df4b8a7 207 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 203 1.8E-65 T 31-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DY252_04945 7c36d6216ea2b7f681a0063d0df4b8a7 207 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 204 32.666 T 31-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DY252_04945 7c36d6216ea2b7f681a0063d0df4b8a7 207 Pfam PF00117 Glutamine amidotransferase class-I 6 201 2.0E-18 T 31-10-2018 IPR017926 Glutamine amidotransferase DY252_11840 7ef8736aed8836bb87a8150cfcf05aee 446 Gene3D G3DSA:1.20.970.10 3 67 1.5E-24 T 31-10-2018 DY252_11840 7ef8736aed8836bb87a8150cfcf05aee 446 SMART SM00941 349 423 1.6E-22 T 31-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_11840 7ef8736aed8836bb87a8150cfcf05aee 446 SUPERFAMILY SSF52418 74 333 4.97E-90 T 31-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_11840 7ef8736aed8836bb87a8150cfcf05aee 446 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 1 426 1.0E-197 T 31-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 DY252_11840 7ef8736aed8836bb87a8150cfcf05aee 446 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 66 5.0E-21 T 31-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_11840 7ef8736aed8836bb87a8150cfcf05aee 446 SUPERFAMILY SSF47648 1 69 1.23E-21 T 31-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_11840 7ef8736aed8836bb87a8150cfcf05aee 446 PIRSF PIRSF000478 1 435 1.8E-151 T 31-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_11840 7ef8736aed8836bb87a8150cfcf05aee 446 Gene3D G3DSA:3.90.1170.30 335 423 3.7E-132 T 31-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_11840 7ef8736aed8836bb87a8150cfcf05aee 446 Pfam PF00591 Glycosyl transferase family, a/b domain 79 308 2.5E-42 T 31-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_11840 7ef8736aed8836bb87a8150cfcf05aee 446 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 4 422 3.8E-159 T 31-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_11840 7ef8736aed8836bb87a8150cfcf05aee 446 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 351 422 1.5E-17 T 31-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_11840 7ef8736aed8836bb87a8150cfcf05aee 446 Hamap MF_01628 Thymidine phosphorylase [deoA]. 1 440 44.779 T 31-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 DY252_11840 7ef8736aed8836bb87a8150cfcf05aee 446 Gene3D G3DSA:3.40.1030.10 79 334 3.7E-132 T 31-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_11840 7ef8736aed8836bb87a8150cfcf05aee 446 SUPERFAMILY SSF54680 336 430 6.93E-22 T 31-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_11840 7ef8736aed8836bb87a8150cfcf05aee 446 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 112 127 - T 31-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DY252_09610 2460d412fd552cf2fcf9f20061c32459 225 SMART SM00345 11 69 8.1E-23 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_09610 2460d412fd552cf2fcf9f20061c32459 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 69 1.2E-20 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_09610 2460d412fd552cf2fcf9f20061c32459 225 SMART SM00895 79 203 4.4E-23 T 31-10-2018 IPR011711 GntR, C-terminal DY252_09610 2460d412fd552cf2fcf9f20061c32459 225 Pfam PF07729 FCD domain 79 202 1.2E-28 T 31-10-2018 IPR011711 GntR, C-terminal DY252_09610 2460d412fd552cf2fcf9f20061c32459 225 Gene3D G3DSA:1.10.10.10 4 70 2.2E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_09610 2460d412fd552cf2fcf9f20061c32459 225 SUPERFAMILY SSF48008 76 208 2.88E-28 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_09610 2460d412fd552cf2fcf9f20061c32459 225 SUPERFAMILY SSF46785 3 95 5.66E-22 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_09610 2460d412fd552cf2fcf9f20061c32459 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 3.0E-7 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_09610 2460d412fd552cf2fcf9f20061c32459 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 3.0E-7 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_09610 2460d412fd552cf2fcf9f20061c32459 225 Gene3D G3DSA:1.20.120.530 72 213 3.2E-32 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_15340 3ff1d435bb91c013e4a4378bdbabfcb6 511 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 418 498 6.1E-29 T 31-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like DY252_15340 3ff1d435bb91c013e4a4378bdbabfcb6 511 Gene3D G3DSA:3.30.300.20 418 500 7.8E-28 T 31-10-2018 IPR015946 K homology domain-like, alpha/beta DY252_15340 3ff1d435bb91c013e4a4378bdbabfcb6 511 Gene3D G3DSA:3.40.50.300 2 160 4.0E-42 T 31-10-2018 DY252_15340 3ff1d435bb91c013e4a4378bdbabfcb6 511 PIRSF PIRSF006485 1 506 1.4E-159 T 31-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DY252_15340 3ff1d435bb91c013e4a4378bdbabfcb6 511 Gene3D G3DSA:3.40.50.300 235 414 1.3E-47 T 31-10-2018 DY252_15340 3ff1d435bb91c013e4a4378bdbabfcb6 511 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 243 263 1.3E-5 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_15340 3ff1d435bb91c013e4a4378bdbabfcb6 511 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 313 331 1.3E-5 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_15340 3ff1d435bb91c013e4a4378bdbabfcb6 511 Hamap MF_00195 GTPase Der [der]. 2 501 36.646 T 31-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DY252_15340 3ff1d435bb91c013e4a4378bdbabfcb6 511 SUPERFAMILY SSF52540 237 504 3.78E-55 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_15340 3ff1d435bb91c013e4a4378bdbabfcb6 511 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 498 2.5E-162 T 31-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DY252_15340 3ff1d435bb91c013e4a4378bdbabfcb6 511 Pfam PF01926 50S ribosome-binding GTPase 243 360 1.3E-22 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_15340 3ff1d435bb91c013e4a4378bdbabfcb6 511 Pfam PF01926 50S ribosome-binding GTPase 4 120 1.8E-28 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_15340 3ff1d435bb91c013e4a4378bdbabfcb6 511 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 160 1.2E-23 T 31-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DY252_15340 3ff1d435bb91c013e4a4378bdbabfcb6 511 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 240 406 5.0E-27 T 31-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DY252_15340 3ff1d435bb91c013e4a4378bdbabfcb6 511 SUPERFAMILY SSF52540 3 172 2.43E-45 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_17855 bb26baf1ea6f78d27c8cc4b43e4a6531 260 Gene3D G3DSA:3.40.1280.10 17 179 3.4E-45 T 31-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DY252_17855 bb26baf1ea6f78d27c8cc4b43e4a6531 260 Pfam PF00588 SpoU rRNA Methylase family 20 170 2.1E-23 T 31-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DY252_17855 bb26baf1ea6f78d27c8cc4b43e4a6531 260 SUPERFAMILY SSF75217 17 177 5.56E-29 T 31-10-2018 IPR029028 Alpha/beta knot methyltransferases DY252_17855 bb26baf1ea6f78d27c8cc4b43e4a6531 260 PIRSF PIRSF004808 14 260 1.1E-68 T 31-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 DY252_17855 bb26baf1ea6f78d27c8cc4b43e4a6531 260 Gene3D G3DSA:1.10.8.590 181 260 2.7E-15 T 31-10-2018 DY252_12265 e53b11adc5aaaee06e77fd0fb77b2e42 432 Gene3D G3DSA:3.40.190.10 27 377 2.1E-119 T 31-10-2018 DY252_12265 e53b11adc5aaaee06e77fd0fb77b2e42 432 SUPERFAMILY SSF53850 23 420 9.24E-73 T 31-10-2018 DY252_12265 e53b11adc5aaaee06e77fd0fb77b2e42 432 Gene3D G3DSA:3.40.190.10 143 417 2.1E-119 T 31-10-2018 DY252_12265 e53b11adc5aaaee06e77fd0fb77b2e42 432 Pfam PF13416 Bacterial extracellular solute-binding protein 42 362 2.8E-43 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_20150 89bcfb3123c013ffd37d86ec0a09e96e 107 SUPERFAMILY SSF46785 5 92 6.82E-22 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_20150 89bcfb3123c013ffd37d86ec0a09e96e 107 Gene3D G3DSA:1.10.10.10 2 93 1.2E-19 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_20150 89bcfb3123c013ffd37d86ec0a09e96e 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 1.8E-6 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_20150 89bcfb3123c013ffd37d86ec0a09e96e 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.8E-6 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_20150 89bcfb3123c013ffd37d86ec0a09e96e 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 1.8E-6 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_20150 89bcfb3123c013ffd37d86ec0a09e96e 107 Pfam PF12840 Helix-turn-helix domain 10 69 1.3E-13 T 31-10-2018 DY252_20150 89bcfb3123c013ffd37d86ec0a09e96e 107 SMART SM00418 8 88 1.7E-12 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_09875 5790d8d06eacc0938be246f649b2f4f7 263 PIRSF PIRSF006241 1 260 3.5E-92 T 31-10-2018 IPR026040 Hydroxypyruvate isomerase-like DY252_09875 5790d8d06eacc0938be246f649b2f4f7 263 SUPERFAMILY SSF51658 1 258 7.73E-84 T 31-10-2018 IPR036237 Xylose isomerase-like superfamily DY252_09875 5790d8d06eacc0938be246f649b2f4f7 263 Gene3D G3DSA:3.20.20.150 1 260 6.0E-79 T 31-10-2018 DY252_09875 5790d8d06eacc0938be246f649b2f4f7 263 Pfam PF01261 Xylose isomerase-like TIM barrel 21 216 2.2E-30 T 31-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DY252_19460 e1081888b13e4804c735efcfe8802187 97 SUPERFAMILY SSF143800 2 73 2.35E-25 T 31-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_19460 e1081888b13e4804c735efcfe8802187 97 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 3.3E-22 T 31-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_19460 e1081888b13e4804c735efcfe8802187 97 Pfam PF00830 Ribosomal L28 family 3 61 2.1E-22 T 31-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_19460 e1081888b13e4804c735efcfe8802187 97 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 68 20.048 T 31-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_19460 e1081888b13e4804c735efcfe8802187 97 Gene3D G3DSA:2.30.170.40 2 76 4.1E-26 T 31-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_05305 0a62d7e78fea3b6b51225069095f6eb8 328 SUPERFAMILY SSF51735 3 322 2.79E-63 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_05305 0a62d7e78fea3b6b51225069095f6eb8 328 Gene3D G3DSA:3.90.25.10 174 304 4.8E-119 T 31-10-2018 DY252_05305 0a62d7e78fea3b6b51225069095f6eb8 328 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 323 47.794 T 31-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 DY252_05305 0a62d7e78fea3b6b51225069095f6eb8 328 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 322 1.5E-121 T 31-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 DY252_05305 0a62d7e78fea3b6b51225069095f6eb8 328 Gene3D G3DSA:3.40.50.720 3 317 4.8E-119 T 31-10-2018 DY252_05305 0a62d7e78fea3b6b51225069095f6eb8 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 249 1.8E-42 T 31-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DY252_05440 d329f1a897e53c4e04d7ffa87a2110c2 289 Hamap MF_01830 Putative hydro-lyase . 22 278 49.81 T 31-10-2018 IPR016938 Uncharacterised protein family UPF0317 DY252_05440 d329f1a897e53c4e04d7ffa87a2110c2 289 Gene3D G3DSA:3.40.1640.10 31 264 1.2E-86 T 31-10-2018 DY252_05440 d329f1a897e53c4e04d7ffa87a2110c2 289 Pfam PF07286 Protein of unknown function (DUF1445) 126 268 4.4E-60 T 31-10-2018 IPR009906 D-glutamate cyclase DY252_05440 d329f1a897e53c4e04d7ffa87a2110c2 289 PIRSF PIRSF029755 9 276 1.8E-108 T 31-10-2018 IPR016938 Uncharacterised protein family UPF0317 DY252_05440 d329f1a897e53c4e04d7ffa87a2110c2 289 SUPERFAMILY SSF160920 18 269 8.76E-103 T 31-10-2018 IPR038021 Putative hydro-lyase DY252_05440 d329f1a897e53c4e04d7ffa87a2110c2 289 Gene3D G3DSA:3.30.2040.10 136 248 1.2E-86 T 31-10-2018 DY252_10210 f5cc75afe3107b60a040fe635a983b70 388 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_10210 f5cc75afe3107b60a040fe635a983b70 388 Pfam PF00005 ABC transporter 46 187 5.6E-34 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_10210 f5cc75afe3107b60a040fe635a983b70 388 SUPERFAMILY SSF52540 30 268 7.8E-87 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_10210 f5cc75afe3107b60a040fe635a983b70 388 Gene3D G3DSA:3.40.50.300 29 247 6.7E-66 T 31-10-2018 DY252_10210 f5cc75afe3107b60a040fe635a983b70 388 SUPERFAMILY SSF50331 262 387 5.67E-16 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_10210 f5cc75afe3107b60a040fe635a983b70 388 Gene3D G3DSA:2.40.50.940 248 311 2.5E-8 T 31-10-2018 DY252_10210 f5cc75afe3107b60a040fe635a983b70 388 SMART SM00382 54 237 1.3E-16 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_10210 f5cc75afe3107b60a040fe635a983b70 388 Gene3D G3DSA:2.40.50.140 312 366 2.5E-8 T 31-10-2018 DY252_10210 f5cc75afe3107b60a040fe635a983b70 388 Pfam PF08402 TOBE domain 305 386 4.8E-18 T 31-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DY252_10210 f5cc75afe3107b60a040fe635a983b70 388 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 60 386 4.4E-125 T 31-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 DY252_07830 805d647bd8e797aea7e28f7110f1efc2 541 SUPERFAMILY SSF56801 22 538 4.19E-134 T 31-10-2018 DY252_07830 805d647bd8e797aea7e28f7110f1efc2 541 Pfam PF00501 AMP-binding enzyme 49 442 3.9E-79 T 31-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DY252_07830 805d647bd8e797aea7e28f7110f1efc2 541 Pfam PF13193 AMP-binding enzyme C-terminal domain 451 529 4.0E-22 T 31-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DY252_07830 805d647bd8e797aea7e28f7110f1efc2 541 ProSitePatterns PS00455 Putative AMP-binding domain signature. 200 211 - T 31-10-2018 IPR020845 AMP-binding, conserved site DY252_07830 805d647bd8e797aea7e28f7110f1efc2 541 Gene3D G3DSA:3.40.50.12780 31 435 1.2E-100 T 31-10-2018 DY252_07830 805d647bd8e797aea7e28f7110f1efc2 541 Gene3D G3DSA:3.30.300.310 438 540 8.3E-28 T 31-10-2018 DY252_06805 c8b8122f8e1d410378a6f4922a8f8d52 296 Gene3D G3DSA:3.30.930.10 3 214 2.6E-111 T 31-10-2018 DY252_06805 c8b8122f8e1d410378a6f4922a8f8d52 296 SUPERFAMILY SSF55681 11 288 9.69E-135 T 31-10-2018 DY252_06805 c8b8122f8e1d410378a6f4922a8f8d52 296 Gene3D G3DSA:1.20.58.180 215 294 1.2E-32 T 31-10-2018 DY252_06805 c8b8122f8e1d410378a6f4922a8f8d52 296 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 11 294 4.8E-149 T 31-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DY252_06805 c8b8122f8e1d410378a6f4922a8f8d52 296 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 10 291 59.467 T 31-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DY252_06805 c8b8122f8e1d410378a6f4922a8f8d52 296 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 116 140 1.0E-67 T 31-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DY252_06805 c8b8122f8e1d410378a6f4922a8f8d52 296 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 251 267 1.0E-67 T 31-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DY252_06805 c8b8122f8e1d410378a6f4922a8f8d52 296 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 165 180 1.0E-67 T 31-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DY252_06805 c8b8122f8e1d410378a6f4922a8f8d52 296 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 64 79 1.0E-67 T 31-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DY252_06805 c8b8122f8e1d410378a6f4922a8f8d52 296 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 85 105 1.0E-67 T 31-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DY252_06805 c8b8122f8e1d410378a6f4922a8f8d52 296 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 142 162 1.0E-67 T 31-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DY252_06805 c8b8122f8e1d410378a6f4922a8f8d52 296 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 12 289 1.5E-150 T 31-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DY252_20645 12b2107bd24762724803bb76e23148e3 312 SUPERFAMILY SSF53474 38 307 4.63E-55 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_20645 12b2107bd24762724803bb76e23148e3 312 Gene3D G3DSA:3.40.50.1820 20 312 1.6E-66 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_20645 12b2107bd24762724803bb76e23148e3 312 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 90 106 - T 31-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 DY252_20645 12b2107bd24762724803bb76e23148e3 312 Pfam PF07859 alpha/beta hydrolase fold 90 287 3.5E-54 T 31-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DY252_18195 65c1208670e61be1523b98206a516380 449 SUPERFAMILY SSF111283 7 448 3.53E-129 T 31-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 DY252_18195 65c1208670e61be1523b98206a516380 449 Pfam PF01523 Putative modulator of DNA gyrase 26 318 7.9E-61 T 31-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 DY252_18195 65c1208670e61be1523b98206a516380 449 Gene3D G3DSA:3.30.2290.10 2 226 2.1E-71 T 31-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal DY252_17135 49a2c1ccd6ecc7ddd6342bb305190451 303 Gene3D G3DSA:1.10.10.10 3 84 5.6E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_17135 49a2c1ccd6ecc7ddd6342bb305190451 303 Gene3D G3DSA:3.40.190.10 183 272 7.5E-8 T 31-10-2018 DY252_17135 49a2c1ccd6ecc7ddd6342bb305190451 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.6E-19 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_17135 49a2c1ccd6ecc7ddd6342bb305190451 303 Pfam PF03466 LysR substrate binding domain 91 301 2.8E-22 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_17135 49a2c1ccd6ecc7ddd6342bb305190451 303 SUPERFAMILY SSF53850 94 302 2.39E-24 T 31-10-2018 DY252_17135 49a2c1ccd6ecc7ddd6342bb305190451 303 Gene3D G3DSA:3.40.190.10 85 179 9.1E-10 T 31-10-2018 DY252_17135 49a2c1ccd6ecc7ddd6342bb305190451 303 SUPERFAMILY SSF46785 3 85 1.79E-21 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_17135 49a2c1ccd6ecc7ddd6342bb305190451 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.2E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_17135 49a2c1ccd6ecc7ddd6342bb305190451 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.2E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_17135 49a2c1ccd6ecc7ddd6342bb305190451 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.2E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_05915 fdd3a59bbabaf9ae72015e1da6687cc8 1246 Pfam PF01568 Molydopterin dinucleotide binding domain 1088 1203 3.8E-23 T 31-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DY252_05915 fdd3a59bbabaf9ae72015e1da6687cc8 1246 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 778 795 - T 31-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DY252_05915 fdd3a59bbabaf9ae72015e1da6687cc8 1246 SUPERFAMILY SSF53706 19 1070 0.0 T 31-10-2018 DY252_05915 fdd3a59bbabaf9ae72015e1da6687cc8 1246 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1236 0.0 T 31-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 DY252_05915 fdd3a59bbabaf9ae72015e1da6687cc8 1246 Gene3D G3DSA:3.40.50.12440 45 1245 0.0 T 31-10-2018 DY252_05915 fdd3a59bbabaf9ae72015e1da6687cc8 1246 Pfam PF00384 Molybdopterin oxidoreductase 109 834 1.4E-153 T 31-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_05915 fdd3a59bbabaf9ae72015e1da6687cc8 1246 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 41 1.5E-16 T 31-10-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 DY252_05915 fdd3a59bbabaf9ae72015e1da6687cc8 1246 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1126 1153 - T 31-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DY252_05915 fdd3a59bbabaf9ae72015e1da6687cc8 1246 SMART SM00926 44 106 1.4E-6 T 31-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_05915 fdd3a59bbabaf9ae72015e1da6687cc8 1246 SUPERFAMILY SSF50692 1087 1235 1.65E-45 T 31-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DY252_18305 6bd991feb77b1b57f298bbcfc4af4999 116 Pfam PF11512 Agrobacterium tumefaciens protein Atu4866 38 111 2.0E-38 T 31-10-2018 IPR020955 Uncharacterised protein family Atu4866 DY252_18305 6bd991feb77b1b57f298bbcfc4af4999 116 Gene3D G3DSA:2.40.128.290 36 113 1.7E-37 T 31-10-2018 IPR038646 Atu4866-like superfamily DY252_16965 694a0286cf8e7e5618f014a36b7e4969 429 Gene3D G3DSA:3.40.50.720 199 425 1.3E-52 T 31-10-2018 DY252_16965 694a0286cf8e7e5618f014a36b7e4969 429 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 6 402 4.3E-115 T 31-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DY252_16965 694a0286cf8e7e5618f014a36b7e4969 429 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 315 415 7.7E-20 T 31-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DY252_16965 694a0286cf8e7e5618f014a36b7e4969 429 SMART SM00984 315 417 2.9E-28 T 31-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DY252_16965 694a0286cf8e7e5618f014a36b7e4969 429 Gene3D G3DSA:3.40.50.720 2 195 8.9E-59 T 31-10-2018 DY252_16965 694a0286cf8e7e5618f014a36b7e4969 429 PIRSF PIRSF000124 5 427 2.3E-55 T 31-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DY252_16965 694a0286cf8e7e5618f014a36b7e4969 429 SUPERFAMILY SSF48179 200 290 1.87E-23 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_16965 694a0286cf8e7e5618f014a36b7e4969 429 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 201 289 9.8E-23 T 31-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DY252_16965 694a0286cf8e7e5618f014a36b7e4969 429 SUPERFAMILY SSF51735 5 192 1.44E-45 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_16965 694a0286cf8e7e5618f014a36b7e4969 429 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 6 177 6.4E-36 T 31-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DY252_16965 694a0286cf8e7e5618f014a36b7e4969 429 PIRSF PIRSF500136 1 429 2.6E-141 T 31-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 DY252_16965 694a0286cf8e7e5618f014a36b7e4969 429 SUPERFAMILY SSF52413 308 419 1.31E-21 T 31-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 DY252_05180 2d09cc45117390d6930c538b9c258609 162 Pfam PF00588 SpoU rRNA Methylase family 2 142 5.5E-30 T 31-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DY252_05180 2d09cc45117390d6930c538b9c258609 162 PIRSF PIRSF029256 1 155 3.6E-50 T 31-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DY252_05180 2d09cc45117390d6930c538b9c258609 162 SUPERFAMILY SSF75217 2 149 1.5E-37 T 31-10-2018 IPR029028 Alpha/beta knot methyltransferases DY252_05180 2d09cc45117390d6930c538b9c258609 162 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 1 152 28.683 T 31-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DY252_05180 2d09cc45117390d6930c538b9c258609 162 Gene3D G3DSA:3.40.1280.10 1 156 4.1E-49 T 31-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DY252_02900 0a15e087849c342e0cc11ba7da7169fa 219 Gene3D G3DSA:1.20.1050.10 88 198 3.8E-49 T 31-10-2018 DY252_02900 0a15e087849c342e0cc11ba7da7169fa 219 Pfam PF13410 Glutathione S-transferase, C-terminal domain 148 204 1.0E-5 T 31-10-2018 DY252_02900 0a15e087849c342e0cc11ba7da7169fa 219 SUPERFAMILY SSF47616 84 203 1.71E-13 T 31-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DY252_02900 0a15e087849c342e0cc11ba7da7169fa 219 Pfam PF13409 Glutathione S-transferase, N-terminal domain 15 79 8.4E-7 T 31-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DY252_02900 0a15e087849c342e0cc11ba7da7169fa 219 Gene3D G3DSA:3.40.30.10 9 202 3.8E-49 T 31-10-2018 DY252_02900 0a15e087849c342e0cc11ba7da7169fa 219 SUPERFAMILY SSF52833 8 88 8.24E-13 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_06190 d66b7dc5c2da3527303f3703e5a81cee 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 73 5.9E-7 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_06190 d66b7dc5c2da3527303f3703e5a81cee 218 SUPERFAMILY SSF46689 25 83 1.07E-10 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_06190 d66b7dc5c2da3527303f3703e5a81cee 218 Gene3D G3DSA:1.10.357.10 24 190 1.4E-12 T 31-10-2018 DY252_05400 d456eb3188b448d952b24fc1e265c5eb 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 217 1.3E-17 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_05400 d456eb3188b448d952b24fc1e265c5eb 223 SMART SM00448 1 112 1.2E-34 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_05400 d456eb3188b448d952b24fc1e265c5eb 223 SMART SM00862 145 218 4.9E-16 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_05400 d456eb3188b448d952b24fc1e265c5eb 223 Pfam PF00072 Response regulator receiver domain 3 111 5.3E-24 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_05400 d456eb3188b448d952b24fc1e265c5eb 223 SUPERFAMILY SSF52172 1 171 4.98E-37 T 31-10-2018 IPR011006 CheY-like superfamily DY252_05400 d456eb3188b448d952b24fc1e265c5eb 223 Gene3D G3DSA:3.40.50.2300 1 122 5.1E-36 T 31-10-2018 DY252_05400 d456eb3188b448d952b24fc1e265c5eb 223 Gene3D G3DSA:1.10.10.10 123 222 3.5E-24 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 SUPERFAMILY SSF48295 416 520 1.99E-38 T 31-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 Gene3D G3DSA:1.10.1750.10 422 520 1.0E-35 T 31-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 32 520 32.113 T 31-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 ProSitePatterns PS01008 DnaA protein signature. 479 498 - T 31-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 430 498 1.4E-31 T 31-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 SMART SM00382 218 346 1.5E-8 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 SMART SM00760 429 498 2.3E-42 T 31-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 Pfam PF11638 DnaA N-terminal domain 34 94 1.3E-15 T 31-10-2018 IPR024633 DnaA N-terminal domain DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 Gene3D G3DSA:1.10.8.60 352 421 4.3E-21 T 31-10-2018 DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 35 519 4.3E-168 T 31-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 Pfam PF00308 Bacterial dnaA protein 186 402 2.6E-89 T 31-10-2018 IPR013317 Chromosomal replication initiator protein DnaA DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 Gene3D G3DSA:3.30.300.180 31 141 1.3E-11 T 31-10-2018 IPR038454 DnaA, N-terminal domain superfamily DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 Gene3D G3DSA:3.40.50.300 168 350 3.9E-51 T 31-10-2018 DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 251 265 6.8E-47 T 31-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 317 344 6.8E-47 T 31-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 479 498 6.8E-47 T 31-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 219 239 6.8E-47 T 31-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 283 297 6.8E-47 T 31-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DY252_00595 25472538dffd4e3fbfdb3082b10576e7 521 SUPERFAMILY SSF52540 186 397 6.69E-41 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07600 95b61a0c36816042f05dc1cc958f7ca5 319 SMART SM00062 33 253 7.9E-18 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_07600 95b61a0c36816042f05dc1cc958f7ca5 319 SUPERFAMILY SSF53850 33 259 7.25E-55 T 31-10-2018 DY252_07600 95b61a0c36816042f05dc1cc958f7ca5 319 Gene3D G3DSA:3.40.190.10 35 307 7.7E-107 T 31-10-2018 DY252_07600 95b61a0c36816042f05dc1cc958f7ca5 319 Gene3D G3DSA:1.10.8.450 244 276 7.7E-107 T 31-10-2018 DY252_07600 95b61a0c36816042f05dc1cc958f7ca5 319 Gene3D G3DSA:3.40.190.10 113 212 7.7E-107 T 31-10-2018 DY252_07600 95b61a0c36816042f05dc1cc958f7ca5 319 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 35 316 4.9E-79 T 31-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 DY252_07600 95b61a0c36816042f05dc1cc958f7ca5 319 Pfam PF09084 NMT1/THI5 like 58 249 7.4E-22 T 31-10-2018 IPR015168 SsuA/THI5-like DY252_16705 1a9f9a55fee99412d562cd6fa8a0faab 352 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 262 349 3.0E-9 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_16705 1a9f9a55fee99412d562cd6fa8a0faab 352 SMART SM00387 254 352 9.5E-15 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_16705 1a9f9a55fee99412d562cd6fa8a0faab 352 Pfam PF07568 Histidine kinase 158 231 4.8E-26 T 31-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain DY252_16705 1a9f9a55fee99412d562cd6fa8a0faab 352 Gene3D G3DSA:3.30.450.20 18 142 2.4E-29 T 31-10-2018 DY252_16705 1a9f9a55fee99412d562cd6fa8a0faab 352 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 144 4.1E-25 T 31-10-2018 IPR000014 PAS domain DY252_16705 1a9f9a55fee99412d562cd6fa8a0faab 352 Pfam PF00989 PAS fold 23 135 1.1E-11 T 31-10-2018 IPR013767 PAS fold GO:0006355 DY252_16705 1a9f9a55fee99412d562cd6fa8a0faab 352 SUPERFAMILY SSF55785 34 145 2.84E-24 T 31-10-2018 IPR035965 PAS domain superfamily DY252_16705 1a9f9a55fee99412d562cd6fa8a0faab 352 SUPERFAMILY SSF55874 220 348 1.07E-16 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_16705 1a9f9a55fee99412d562cd6fa8a0faab 352 SMART SM00091 22 88 4.2E-9 T 31-10-2018 IPR000014 PAS domain DY252_16705 1a9f9a55fee99412d562cd6fa8a0faab 352 Gene3D G3DSA:3.30.565.10 215 352 1.1E-31 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_02620 00f7923434fab1f40b24311d8c8e8a79 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 314 9.0E-19 T 31-10-2018 DY252_02620 00f7923434fab1f40b24311d8c8e8a79 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 159 174 9.0E-19 T 31-10-2018 DY252_02620 00f7923434fab1f40b24311d8c8e8a79 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 9.0E-19 T 31-10-2018 DY252_02620 00f7923434fab1f40b24311d8c8e8a79 407 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 298 9.0E-19 T 31-10-2018 DY252_02620 00f7923434fab1f40b24311d8c8e8a79 407 SUPERFAMILY SSF51905 8 388 1.64E-60 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_02620 00f7923434fab1f40b24311d8c8e8a79 407 Gene3D G3DSA:3.30.9.50 83 272 7.1E-103 T 31-10-2018 DY252_02620 00f7923434fab1f40b24311d8c8e8a79 407 Gene3D G3DSA:3.50.50.60 10 341 7.1E-103 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_02620 00f7923434fab1f40b24311d8c8e8a79 407 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 10 393 2.5E-137 T 31-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 DY252_02620 00f7923434fab1f40b24311d8c8e8a79 407 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 10 393 4.2E-120 T 31-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 DY252_02620 00f7923434fab1f40b24311d8c8e8a79 407 Pfam PF01494 FAD binding domain 9 341 5.1E-28 T 31-10-2018 IPR002938 FAD-binding domain GO:0071949 DY252_02620 00f7923434fab1f40b24311d8c8e8a79 407 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 297 310 - T 31-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 DY252_02110 7d1aa492b0de0f5a00220cbb2f07940f 491 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 466 1.2E-15 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_02110 7d1aa492b0de0f5a00220cbb2f07940f 491 Gene3D G3DSA:3.30.565.10 316 477 4.9E-32 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_02110 7d1aa492b0de0f5a00220cbb2f07940f 491 SMART SM00387 355 468 2.8E-19 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_02110 7d1aa492b0de0f5a00220cbb2f07940f 491 Gene3D G3DSA:1.10.287.130 198 309 8.0E-16 T 31-10-2018 DY252_02110 7d1aa492b0de0f5a00220cbb2f07940f 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 465 7.2E-10 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_02110 7d1aa492b0de0f5a00220cbb2f07940f 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 7.2E-10 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_02110 7d1aa492b0de0f5a00220cbb2f07940f 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 7.2E-10 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_02110 7d1aa492b0de0f5a00220cbb2f07940f 491 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 445 7.2E-10 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_02110 7d1aa492b0de0f5a00220cbb2f07940f 491 SUPERFAMILY SSF55874 306 466 3.01E-31 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_03720 44f3fe2c3f1872f9b58f0b7a4772b938 407 Gene3D G3DSA:3.40.50.2300 2 125 1.2E-26 T 31-10-2018 DY252_03720 44f3fe2c3f1872f9b58f0b7a4772b938 407 Gene3D G3DSA:1.10.3210.10 126 389 2.0E-55 T 31-10-2018 DY252_03720 44f3fe2c3f1872f9b58f0b7a4772b938 407 SUPERFAMILY SSF109604 126 380 5.81E-50 T 31-10-2018 DY252_03720 44f3fe2c3f1872f9b58f0b7a4772b938 407 Pfam PF00072 Response regulator receiver domain 4 114 2.0E-19 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_03720 44f3fe2c3f1872f9b58f0b7a4772b938 407 SMART SM00448 2 114 1.2E-18 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_03720 44f3fe2c3f1872f9b58f0b7a4772b938 407 SUPERFAMILY SSF52172 4 126 7.83E-28 T 31-10-2018 IPR011006 CheY-like superfamily DY252_03720 44f3fe2c3f1872f9b58f0b7a4772b938 407 PIRSF PIRSF036883 1 384 4.8E-56 T 31-10-2018 IPR014626 Signal transduction response regulator with modified HD-GYP domain, putative DY252_03720 44f3fe2c3f1872f9b58f0b7a4772b938 407 Pfam PF08668 HDOD domain 139 336 2.0E-46 T 31-10-2018 IPR013976 Metal-dependent hydrolase HDOD DY252_15035 fec5ebc4970c53e600f0fb1121f38a06 449 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 204 445 1.7E-73 T 31-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DY252_15035 fec5ebc4970c53e600f0fb1121f38a06 449 Gene3D G3DSA:1.10.285.10 11 385 1.0E-147 T 31-10-2018 DY252_15035 fec5ebc4970c53e600f0fb1121f38a06 449 SUPERFAMILY SSF51735 204 445 6.5E-64 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_15035 fec5ebc4970c53e600f0fb1121f38a06 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 237 257 2.2E-28 T 31-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DY252_15035 fec5ebc4970c53e600f0fb1121f38a06 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 116 130 2.2E-28 T 31-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DY252_15035 fec5ebc4970c53e600f0fb1121f38a06 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 374 385 2.2E-28 T 31-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DY252_15035 fec5ebc4970c53e600f0fb1121f38a06 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 195 217 2.2E-28 T 31-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DY252_15035 fec5ebc4970c53e600f0fb1121f38a06 449 Gene3D G3DSA:3.40.50.720 211 375 1.0E-147 T 31-10-2018 DY252_15035 fec5ebc4970c53e600f0fb1121f38a06 449 SUPERFAMILY SSF53223 19 206 3.01E-62 T 31-10-2018 DY252_15035 fec5ebc4970c53e600f0fb1121f38a06 449 PIRSF PIRSF000185 24 447 1.8E-114 T 31-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 DY252_15035 fec5ebc4970c53e600f0fb1121f38a06 449 SMART SM00839 206 447 1.9E-76 T 31-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DY252_15035 fec5ebc4970c53e600f0fb1121f38a06 449 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 59 185 1.3E-47 T 31-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DY252_15035 fec5ebc4970c53e600f0fb1121f38a06 449 Gene3D G3DSA:3.40.50.10860 57 192 1.0E-147 T 31-10-2018 DY252_15035 fec5ebc4970c53e600f0fb1121f38a06 449 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 124 137 - T 31-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DY252_14575 99641b7fd4f2daaf1114f51ca1e85db7 586 Gene3D G3DSA:3.40.50.300 320 573 3.6E-59 T 31-10-2018 DY252_14575 99641b7fd4f2daaf1114f51ca1e85db7 586 SUPERFAMILY SSF52540 328 554 6.65E-48 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_14575 99641b7fd4f2daaf1114f51ca1e85db7 586 Pfam PF13469 Sulfotransferase family 333 518 4.5E-39 T 31-10-2018 DY252_14575 99641b7fd4f2daaf1114f51ca1e85db7 586 Gene3D G3DSA:1.25.40.10 10 313 1.2E-10 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_14575 99641b7fd4f2daaf1114f51ca1e85db7 586 SUPERFAMILY SSF48452 138 222 5.31E-5 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_05415 75711a3798b23fc1cce88ea715854335 268 SUPERFAMILY SSF53474 2 259 4.52E-46 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_05415 75711a3798b23fc1cce88ea715854335 268 Gene3D G3DSA:3.40.50.1820 7 261 7.1E-43 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_05415 75711a3798b23fc1cce88ea715854335 268 Pfam PF12697 Alpha/beta hydrolase family 32 254 7.4E-19 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_17595 66ff15e41dedd48bee28e88e393cf009 412 Pfam PF00700 Bacterial flagellin C-terminal helical region 330 411 4.0E-6 T 31-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DY252_17595 66ff15e41dedd48bee28e88e393cf009 412 Gene3D G3DSA:1.20.1330.10 47 229 2.3E-17 T 31-10-2018 DY252_17595 66ff15e41dedd48bee28e88e393cf009 412 Pfam PF00669 Bacterial flagellin N-terminal helical region 18 138 6.3E-12 T 31-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DY252_17595 66ff15e41dedd48bee28e88e393cf009 412 Gene3D G3DSA:1.20.1330.10 295 384 5.3E-6 T 31-10-2018 DY252_17595 66ff15e41dedd48bee28e88e393cf009 412 SUPERFAMILY SSF64518 1 412 6.28E-35 T 31-10-2018 DY252_11695 bd9cca3cf178c48824c834506a52c047 484 Pfam PF02934 GatB/GatE catalytic domain 14 296 4.5E-112 T 31-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 DY252_11695 bd9cca3cf178c48824c834506a52c047 484 SUPERFAMILY SSF55931 13 304 7.85E-115 T 31-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DY252_11695 bd9cca3cf178c48824c834506a52c047 484 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 11 483 37.19 T 31-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 DY252_11695 bd9cca3cf178c48824c834506a52c047 484 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 153 167 - T 31-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 DY252_11695 bd9cca3cf178c48824c834506a52c047 484 Gene3D G3DSA:1.10.150.380 305 421 4.1E-39 T 31-10-2018 DY252_11695 bd9cca3cf178c48824c834506a52c047 484 SMART SM00845 336 482 1.3E-84 T 31-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 DY252_11695 bd9cca3cf178c48824c834506a52c047 484 SUPERFAMILY SSF89095 305 410 4.45E-34 T 31-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 DY252_11695 bd9cca3cf178c48824c834506a52c047 484 Gene3D G3DSA:1.10.10.410 422 484 1.9E-25 T 31-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal DY252_11695 bd9cca3cf178c48824c834506a52c047 484 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 12 481 1.4E-168 T 31-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 DY252_11695 bd9cca3cf178c48824c834506a52c047 484 Pfam PF02637 GatB domain 338 482 2.2E-54 T 31-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 DY252_05470 2478013a9a44ce15af8d29752ba0bc1c 321 Gene3D G3DSA:3.10.20.30 223 321 1.4E-19 T 31-10-2018 IPR012675 Beta-grasp domain superfamily DY252_05470 2478013a9a44ce15af8d29752ba0bc1c 321 Pfam PF00175 Oxidoreductase NAD-binding domain 112 202 4.1E-7 T 31-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DY252_05470 2478013a9a44ce15af8d29752ba0bc1c 321 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 267 275 - T 31-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DY252_05470 2478013a9a44ce15af8d29752ba0bc1c 321 SUPERFAMILY SSF54292 211 320 3.28E-23 T 31-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DY252_05470 2478013a9a44ce15af8d29752ba0bc1c 321 SUPERFAMILY SSF52343 97 226 4.71E-25 T 31-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DY252_05470 2478013a9a44ce15af8d29752ba0bc1c 321 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 236 311 6.5E-10 T 31-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DY252_05470 2478013a9a44ce15af8d29752ba0bc1c 321 SUPERFAMILY SSF63380 3 99 7.81E-21 T 31-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DY252_05470 2478013a9a44ce15af8d29752ba0bc1c 321 Gene3D G3DSA:2.40.30.10 1 100 6.8E-24 T 31-10-2018 DY252_05470 2478013a9a44ce15af8d29752ba0bc1c 321 Gene3D G3DSA:3.40.50.80 101 221 3.1E-25 T 31-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DY252_05470 2478013a9a44ce15af8d29752ba0bc1c 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 89 103 1.3E-30 T 31-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DY252_05470 2478013a9a44ce15af8d29752ba0bc1c 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 111 130 1.3E-30 T 31-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DY252_05470 2478013a9a44ce15af8d29752ba0bc1c 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 189 197 1.3E-30 T 31-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DY252_05470 2478013a9a44ce15af8d29752ba0bc1c 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 26 36 1.3E-30 T 31-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DY252_05470 2478013a9a44ce15af8d29752ba0bc1c 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 136 145 1.3E-30 T 31-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DY252_05470 2478013a9a44ce15af8d29752ba0bc1c 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 75 89 1.3E-30 T 31-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DY252_05470 2478013a9a44ce15af8d29752ba0bc1c 321 Pfam PF00970 Oxidoreductase FAD-binding domain 4 100 1.1E-4 T 31-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DY252_06385 88381c52981bea52ef5bb85f66f48740 674 Pfam PF01321 Creatinase/Prolidase N-terminal domain 83 214 4.4E-20 T 31-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 DY252_06385 88381c52981bea52ef5bb85f66f48740 674 Gene3D G3DSA:3.40.350.10 224 363 4.9E-25 T 31-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DY252_06385 88381c52981bea52ef5bb85f66f48740 674 SUPERFAMILY SSF55920 379 635 2.47E-58 T 31-10-2018 IPR036005 Creatinase/aminopeptidase-like DY252_06385 88381c52981bea52ef5bb85f66f48740 674 Pfam PF16188 C-terminal region of peptidase_M24 609 669 1.5E-23 T 31-10-2018 IPR032416 Peptidase M24, C-terminal domain DY252_06385 88381c52981bea52ef5bb85f66f48740 674 Gene3D G3DSA:3.40.350.10 71 222 6.3E-40 T 31-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DY252_06385 88381c52981bea52ef5bb85f66f48740 674 Gene3D G3DSA:3.90.230.10 376 673 5.9E-100 T 31-10-2018 DY252_06385 88381c52981bea52ef5bb85f66f48740 674 SUPERFAMILY SSF53092 73 204 1.03E-14 T 31-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DY252_06385 88381c52981bea52ef5bb85f66f48740 674 Pfam PF00557 Metallopeptidase family M24 387 599 1.8E-47 T 31-10-2018 IPR000994 Peptidase M24 DY252_06385 88381c52981bea52ef5bb85f66f48740 674 Pfam PF16189 Creatinase/Prolidase N-terminal domain 225 382 5.9E-33 T 31-10-2018 DY252_04220 69a6fe75673a41f00821b14f63b74921 206 Gene3D G3DSA:1.10.10.60 1 69 1.3E-26 T 31-10-2018 DY252_04220 69a6fe75673a41f00821b14f63b74921 206 SUPERFAMILY SSF46689 2 76 3.75E-16 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_04220 69a6fe75673a41f00821b14f63b74921 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 31-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DY252_04220 69a6fe75673a41f00821b14f63b74921 206 SUPERFAMILY SSF48498 82 196 1.56E-22 T 31-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DY252_04220 69a6fe75673a41f00821b14f63b74921 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.5E-13 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_04220 69a6fe75673a41f00821b14f63b74921 206 Gene3D G3DSA:1.10.357.10 77 200 1.6E-27 T 31-10-2018 DY252_17465 fda23d2338b78cea284ef39a6679105a 88 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 1.0E-8 T 31-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DY252_17465 fda23d2338b78cea284ef39a6679105a 88 Gene3D G3DSA:3.30.70.1680 1 62 5.6E-25 T 31-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 DY252_17465 fda23d2338b78cea284ef39a6679105a 88 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 66 9.7E-25 T 31-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DY252_17465 fda23d2338b78cea284ef39a6679105a 88 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 67 16.298 T 31-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DY252_17465 fda23d2338b78cea284ef39a6679105a 88 Pfam PF02599 Global regulator protein family 1 53 2.6E-22 T 31-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DY252_17465 fda23d2338b78cea284ef39a6679105a 88 SUPERFAMILY SSF117130 1 55 6.41E-17 T 31-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 DY252_10630 34fffcd711f3f27da482f6c26b61dd52 621 Pfam PF00270 DEAD/DEAH box helicase 25 194 7.5E-54 T 31-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DY252_10630 34fffcd711f3f27da482f6c26b61dd52 621 SMART SM00490 256 337 4.3E-34 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_10630 34fffcd711f3f27da482f6c26b61dd52 621 SUPERFAMILY SSF52540 73 353 7.82E-74 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_10630 34fffcd711f3f27da482f6c26b61dd52 621 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 31-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DY252_10630 34fffcd711f3f27da482f6c26b61dd52 621 Gene3D G3DSA:3.40.50.300 1 208 7.9E-76 T 31-10-2018 DY252_10630 34fffcd711f3f27da482f6c26b61dd52 621 SMART SM00487 20 220 1.1E-62 T 31-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DY252_10630 34fffcd711f3f27da482f6c26b61dd52 621 Gene3D G3DSA:3.40.50.300 213 420 2.2E-47 T 31-10-2018 DY252_10630 34fffcd711f3f27da482f6c26b61dd52 621 Pfam PF00271 Helicase conserved C-terminal domain 229 337 1.6E-29 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_13280 434658c8c39c4668f606b353c2c3ea4e 435 PRINTS PR00143 Citrate synthase signature 172 185 2.4E-57 T 31-10-2018 IPR002020 Citrate synthase GO:0046912 DY252_13280 434658c8c39c4668f606b353c2c3ea4e 435 PRINTS PR00143 Citrate synthase signature 366 382 2.4E-57 T 31-10-2018 IPR002020 Citrate synthase GO:0046912 DY252_13280 434658c8c39c4668f606b353c2c3ea4e 435 PRINTS PR00143 Citrate synthase signature 226 241 2.4E-57 T 31-10-2018 IPR002020 Citrate synthase GO:0046912 DY252_13280 434658c8c39c4668f606b353c2c3ea4e 435 PRINTS PR00143 Citrate synthase signature 248 276 2.4E-57 T 31-10-2018 IPR002020 Citrate synthase GO:0046912 DY252_13280 434658c8c39c4668f606b353c2c3ea4e 435 PRINTS PR00143 Citrate synthase signature 386 400 2.4E-57 T 31-10-2018 IPR002020 Citrate synthase GO:0046912 DY252_13280 434658c8c39c4668f606b353c2c3ea4e 435 PRINTS PR00143 Citrate synthase signature 303 323 2.4E-57 T 31-10-2018 IPR002020 Citrate synthase GO:0046912 DY252_13280 434658c8c39c4668f606b353c2c3ea4e 435 PIRSF PIRSF001369 44 435 1.2E-170 T 31-10-2018 IPR024176 Citrate synthase, bacterial-type DY252_13280 434658c8c39c4668f606b353c2c3ea4e 435 Gene3D G3DSA:1.10.580.10 64 418 4.7E-148 T 31-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DY252_13280 434658c8c39c4668f606b353c2c3ea4e 435 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 20 427 1.4E-233 T 31-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 DY252_13280 434658c8c39c4668f606b353c2c3ea4e 435 SUPERFAMILY SSF48256 12 435 1.7E-170 T 31-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 DY252_13280 434658c8c39c4668f606b353c2c3ea4e 435 ProSitePatterns PS00480 Citrate synthase signature. 310 322 - T 31-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DY252_13280 434658c8c39c4668f606b353c2c3ea4e 435 Gene3D G3DSA:1.10.230.10 275 383 4.7E-148 T 31-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain DY252_13280 434658c8c39c4668f606b353c2c3ea4e 435 Gene3D G3DSA:2.20.28.60 1 57 1.3E-22 T 31-10-2018 DY252_13280 434658c8c39c4668f606b353c2c3ea4e 435 Pfam PF00285 Citrate synthase, C-terminal domain 53 418 1.3E-135 T 31-10-2018 IPR002020 Citrate synthase GO:0046912 DY252_00830 5993d750d3a9ca818a2bd8e803975b3e 208 SUPERFAMILY SSF52540 17 208 1.06E-71 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_00830 5993d750d3a9ca818a2bd8e803975b3e 208 Gene3D G3DSA:3.40.50.300 15 208 1.6E-70 T 31-10-2018 DY252_00830 5993d750d3a9ca818a2bd8e803975b3e 208 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 37 208 1.1E-63 T 31-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 DY252_00830 5993d750d3a9ca818a2bd8e803975b3e 208 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 35 208 1.8E-70 T 31-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 DY252_00830 5993d750d3a9ca818a2bd8e803975b3e 208 PIRSF PIRSF015617 10 208 3.5E-73 T 31-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 DY252_19685 0bd9aaeda8a51ce9665114fc04dbac94 538 SUPERFAMILY SSF52540 16 244 8.67E-53 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_19685 0bd9aaeda8a51ce9665114fc04dbac94 538 Pfam PF00005 ABC transporter 34 186 8.0E-28 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_19685 0bd9aaeda8a51ce9665114fc04dbac94 538 Pfam PF00005 ABC transporter 289 444 1.8E-15 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_19685 0bd9aaeda8a51ce9665114fc04dbac94 538 ProSitePatterns PS00211 ABC transporters family signature. 418 432 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_19685 0bd9aaeda8a51ce9665114fc04dbac94 538 SUPERFAMILY SSF52540 271 504 6.51E-42 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_19685 0bd9aaeda8a51ce9665114fc04dbac94 538 Gene3D G3DSA:3.40.50.300 2 264 5.3E-55 T 31-10-2018 DY252_19685 0bd9aaeda8a51ce9665114fc04dbac94 538 Gene3D G3DSA:3.40.50.300 268 508 2.4E-40 T 31-10-2018 DY252_19685 0bd9aaeda8a51ce9665114fc04dbac94 538 SMART SM00382 41 233 8.6E-12 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_19685 0bd9aaeda8a51ce9665114fc04dbac94 538 SMART SM00382 298 494 2.8 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_14835 2fea1b71a05da9e3fdc1f7afc1ea3980 495 SUPERFAMILY SSF48150 314 492 1.26E-34 T 31-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DY252_14835 2fea1b71a05da9e3fdc1f7afc1ea3980 495 Gene3D G3DSA:1.10.1670.10 444 494 9.7E-11 T 31-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DY252_14835 2fea1b71a05da9e3fdc1f7afc1ea3980 495 SUPERFAMILY SSF46689 86 133 3.0E-7 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_14835 2fea1b71a05da9e3fdc1f7afc1ea3980 495 Pfam PF06029 AlkA N-terminal domain 210 326 1.4E-29 T 31-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal DY252_14835 2fea1b71a05da9e3fdc1f7afc1ea3980 495 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 333 468 6.9E-5 T 31-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DY252_14835 2fea1b71a05da9e3fdc1f7afc1ea3980 495 Gene3D G3DSA:3.40.10.10 1 74 2.5E-30 T 31-10-2018 IPR035451 Ada-like domain superfamily DY252_14835 2fea1b71a05da9e3fdc1f7afc1ea3980 495 SMART SM00478 336 493 5.4E-15 T 31-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DY252_14835 2fea1b71a05da9e3fdc1f7afc1ea3980 495 SMART SM01009 209 326 6.3E-33 T 31-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal DY252_14835 2fea1b71a05da9e3fdc1f7afc1ea3980 495 SUPERFAMILY SSF57884 4 87 3.27E-33 T 31-10-2018 IPR035451 Ada-like domain superfamily DY252_14835 2fea1b71a05da9e3fdc1f7afc1ea3980 495 Pfam PF12833 Helix-turn-helix domain 107 185 1.2E-23 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_14835 2fea1b71a05da9e3fdc1f7afc1ea3980 495 Gene3D G3DSA:3.30.310.20 209 326 1.3E-25 T 31-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily DY252_14835 2fea1b71a05da9e3fdc1f7afc1ea3980 495 SMART SM00342 101 184 1.1E-24 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_14835 2fea1b71a05da9e3fdc1f7afc1ea3980 495 SUPERFAMILY SSF55945 210 306 1.57E-19 T 31-10-2018 DY252_14835 2fea1b71a05da9e3fdc1f7afc1ea3980 495 SUPERFAMILY SSF46689 137 187 1.08E-9 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_14835 2fea1b71a05da9e3fdc1f7afc1ea3980 495 Gene3D G3DSA:1.10.340.30 327 442 2.2E-25 T 31-10-2018 DY252_14835 2fea1b71a05da9e3fdc1f7afc1ea3980 495 Gene3D G3DSA:1.10.10.60 85 191 5.8E-25 T 31-10-2018 DY252_14835 2fea1b71a05da9e3fdc1f7afc1ea3980 495 Pfam PF02805 Metal binding domain of Ada 9 72 2.9E-30 T 31-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 DY252_00550 18f35a1932db284c707ea1fa7af20bf3 357 SMART SM00382 35 226 2.0E-15 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_00550 18f35a1932db284c707ea1fa7af20bf3 357 Gene3D G3DSA:3.40.50.300 10 228 7.6E-68 T 31-10-2018 DY252_00550 18f35a1932db284c707ea1fa7af20bf3 357 SUPERFAMILY SSF50331 244 355 2.96E-13 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_00550 18f35a1932db284c707ea1fa7af20bf3 357 Gene3D G3DSA:2.40.50.940 229 354 5.2E-14 T 31-10-2018 DY252_00550 18f35a1932db284c707ea1fa7af20bf3 357 SUPERFAMILY SSF52540 11 250 1.39E-85 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_00550 18f35a1932db284c707ea1fa7af20bf3 357 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_00550 18f35a1932db284c707ea1fa7af20bf3 357 Pfam PF08402 TOBE domain 281 354 4.3E-13 T 31-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DY252_00550 18f35a1932db284c707ea1fa7af20bf3 357 Gene3D G3DSA:2.40.50.140 288 347 5.2E-14 T 31-10-2018 DY252_00550 18f35a1932db284c707ea1fa7af20bf3 357 Pfam PF00005 ABC transporter 26 168 1.3E-33 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_18145 e448f759e5f6a605c34a379fae7e846b 456 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 13 456 2.9E-217 T 31-10-2018 IPR011556 Glutamate--cysteine ligase, plant-type GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DY252_18145 e448f759e5f6a605c34a379fae7e846b 456 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 65 360 1.4E-97 T 31-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DY252_18145 e448f759e5f6a605c34a379fae7e846b 456 PIRSF PIRSF017901 1 456 6.3E-192 T 31-10-2018 IPR035434 Glutamate--cysteine ligase, bacteria and plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DY252_18145 e448f759e5f6a605c34a379fae7e846b 456 Gene3D G3DSA:3.30.590.20 5 456 7.9E-190 T 31-10-2018 DY252_18145 e448f759e5f6a605c34a379fae7e846b 456 SUPERFAMILY SSF55931 27 453 3.92E-67 T 31-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DY252_00045 9429f4fe36eddee7cc49445da473ddf4 424 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 420 4.7E-125 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_00045 9429f4fe36eddee7cc49445da473ddf4 424 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 415 5.6E-113 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_00045 9429f4fe36eddee7cc49445da473ddf4 424 PIRSF PIRSF006066 1 424 4.6E-144 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_11870 ed4b88f042bf93205b20790ce475d470 340 SMART SM00062 36 266 4.3E-41 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_11870 ed4b88f042bf93205b20790ce475d470 340 Gene3D G3DSA:3.40.190.10 128 224 1.6E-48 T 31-10-2018 DY252_11870 ed4b88f042bf93205b20790ce475d470 340 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 31-10-2018 IPR018313 Solute-binding protein family 3, conserved site DY252_11870 ed4b88f042bf93205b20790ce475d470 340 SUPERFAMILY SSF53850 27 262 1.05E-47 T 31-10-2018 DY252_11870 ed4b88f042bf93205b20790ce475d470 340 Gene3D G3DSA:3.40.190.10 26 256 1.6E-48 T 31-10-2018 DY252_11870 ed4b88f042bf93205b20790ce475d470 340 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 256 3.7E-28 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_21740 c6775343bbf3734b3067e2f0df9ed003 629 Gene3D G3DSA:3.40.50.300 51 220 6.3E-104 T 31-10-2018 DY252_21740 c6775343bbf3734b3067e2f0df9ed003 629 Gene3D G3DSA:1.10.8.60 46 283 6.3E-104 T 31-10-2018 DY252_21740 c6775343bbf3734b3067e2f0df9ed003 629 Gene3D G3DSA:1.20.272.10 285 406 8.9E-13 T 31-10-2018 DY252_21740 c6775343bbf3734b3067e2f0df9ed003 629 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 275 417 3.8E-52 T 31-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 DY252_21740 c6775343bbf3734b3067e2f0df9ed003 629 Pfam PF12362 DNA polymerase III gamma and tau subunits C terminal 482 597 2.5E-31 T 31-10-2018 IPR022107 DNA polymerase III, subunit gamma/ tau, C-terminal DY252_21740 c6775343bbf3734b3067e2f0df9ed003 629 SMART SM00382 75 222 1.1E-9 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_21740 c6775343bbf3734b3067e2f0df9ed003 629 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 41 401 1.6E-129 T 31-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 DY252_21740 c6775343bbf3734b3067e2f0df9ed003 629 SUPERFAMILY SSF52540 72 264 3.7E-56 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_21740 c6775343bbf3734b3067e2f0df9ed003 629 Pfam PF13177 DNA polymerase III, delta subunit 62 221 6.8E-40 T 31-10-2018 DY252_21740 c6775343bbf3734b3067e2f0df9ed003 629 SUPERFAMILY SSF48019 288 412 2.04E-29 T 31-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DY252_01960 2afcd8f971661a77771e08f5a500cdf7 352 Gene3D G3DSA:3.30.950.10 183 302 1.2E-33 T 31-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DY252_01960 2afcd8f971661a77771e08f5a500cdf7 352 SUPERFAMILY SSF53790 75 293 4.84E-74 T 31-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DY252_01960 2afcd8f971661a77771e08f5a500cdf7 352 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 76 344 3.8E-74 T 31-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DY252_01960 2afcd8f971661a77771e08f5a500cdf7 352 Gene3D G3DSA:3.40.1010.10 61 182 6.8E-43 T 31-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DY252_01960 2afcd8f971661a77771e08f5a500cdf7 352 PIRSF PIRSF005917 63 349 5.3E-96 T 31-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DY252_01960 2afcd8f971661a77771e08f5a500cdf7 352 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 76 276 7.5E-26 T 31-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DY252_01960 2afcd8f971661a77771e08f5a500cdf7 352 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 153 164 - T 31-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 DY252_01960 2afcd8f971661a77771e08f5a500cdf7 352 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 75 295 36.166 T 31-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DY252_01575 0e44d1bde1d16214a6a5b31b580be062 177 SMART SM00471 24 132 1.3E-6 T 31-10-2018 IPR003607 HD/PDEase domain DY252_01575 0e44d1bde1d16214a6a5b31b580be062 177 SUPERFAMILY SSF109604 2 164 1.08E-31 T 31-10-2018 DY252_01575 0e44d1bde1d16214a6a5b31b580be062 177 Gene3D G3DSA:1.10.3210.10 1 175 6.6E-49 T 31-10-2018 DY252_01575 0e44d1bde1d16214a6a5b31b580be062 177 Pfam PF13328 HD domain 8 124 2.4E-16 T 31-10-2018 IPR003607 HD/PDEase domain DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 272 775 2.2E-74 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 247 799 9.3E-175 T 31-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 347 361 7.0E-26 T 31-10-2018 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 498 512 7.0E-26 T 31-10-2018 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 697 716 7.0E-26 T 31-10-2018 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 720 732 7.0E-26 T 31-10-2018 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 620 631 7.0E-26 T 31-10-2018 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 652 7.0E-26 T 31-10-2018 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 Pfam PF00702 haloacid dehalogenase-like hydrolase 494 711 3.6E-33 T 31-10-2018 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 SUPERFAMILY SSF81653 300 397 2.09E-22 T 31-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 Gene3D G3DSA:3.40.50.1000 479 748 3.7E-78 T 31-10-2018 IPR023214 HAD superfamily DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 PRINTS PR00943 Copper-transporting ATPase signature 115 135 9.4E-7 T 31-10-2018 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 PRINTS PR00943 Copper-transporting ATPase signature 267 286 9.4E-7 T 31-10-2018 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 PRINTS PR00943 Copper-transporting ATPase signature 287 305 9.4E-7 T 31-10-2018 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 PRINTS PR00943 Copper-transporting ATPase signature 671 688 9.4E-7 T 31-10-2018 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 Gene3D G3DSA:2.70.150.20 291 402 3.2E-30 T 31-10-2018 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 247 800 2.4E-147 T 31-10-2018 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 SUPERFAMILY SSF55008 66 139 8.77E-15 T 31-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 Pfam PF00403 Heavy-metal-associated domain 74 133 3.4E-10 T 31-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 SUPERFAMILY SSF56784 498 797 9.79E-49 T 31-10-2018 IPR036412 HAD-like superfamily DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 Pfam PF00122 E1-E2 ATPase 297 476 6.4E-50 T 31-10-2018 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 Gene3D G3DSA:3.40.1110.10 509 627 3.7E-78 T 31-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 500 506 - T 31-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 SUPERFAMILY SSF81665 249 783 1.7E-12 T 31-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DY252_08590 218bd4e5e901acefc609fb41e7ed6367 806 Gene3D G3DSA:3.30.70.100 68 140 6.4E-15 T 31-10-2018 DY252_10980 a5ed06708f3bcf008c15b64929271bed 274 SMART SM00849 27 216 5.6E-5 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_10980 a5ed06708f3bcf008c15b64929271bed 274 Gene3D G3DSA:3.60.15.10 4 274 2.9E-53 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_10980 a5ed06708f3bcf008c15b64929271bed 274 SUPERFAMILY SSF56281 4 273 3.28E-49 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_10980 a5ed06708f3bcf008c15b64929271bed 274 Pfam PF12706 Beta-lactamase superfamily domain 40 239 6.9E-27 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_08805 546716e33e266c67428ce993fdbe804a 647 Pfam PF08298 PrkA AAA domain 23 383 2.8E-174 T 31-10-2018 IPR013153 PrkA AAA domain DY252_08805 546716e33e266c67428ce993fdbe804a 647 Pfam PF06798 PrkA serine protein kinase C-terminal domain 386 639 1.4E-75 T 31-10-2018 IPR010650 PrkA C-terminal domain DY252_08805 546716e33e266c67428ce993fdbe804a 647 SMART SM00763 22 383 2.9E-203 T 31-10-2018 IPR013153 PrkA AAA domain DY252_08805 546716e33e266c67428ce993fdbe804a 647 PIRSF PIRSF000549 1 647 1.6E-279 T 31-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 DY252_08805 546716e33e266c67428ce993fdbe804a 647 SUPERFAMILY SSF52540 78 350 1.42E-15 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_00790 a132b662009e10a1fe29aa284a036304 261 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 12 249 1.3E-68 T 31-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 DY252_00790 a132b662009e10a1fe29aa284a036304 261 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 12 238 1.5E-40 T 31-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 DY252_04545 27e2df39cdc8abe527f7c6cceee73ee6 411 Gene3D G3DSA:3.30.300.30 318 409 1.5E-8 T 31-10-2018 DY252_04545 27e2df39cdc8abe527f7c6cceee73ee6 411 SUPERFAMILY SSF56801 112 361 1.44E-31 T 31-10-2018 DY252_04545 27e2df39cdc8abe527f7c6cceee73ee6 411 Gene3D G3DSA:3.40.50.12780 2 317 1.5E-70 T 31-10-2018 DY252_04545 27e2df39cdc8abe527f7c6cceee73ee6 411 Pfam PF00501 AMP-binding enzyme 150 279 8.4E-12 T 31-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DY252_01425 6ff4de192d43a62b470117dbc7225cd6 227 SUPERFAMILY SSF52833 19 123 4.15E-19 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_01425 6ff4de192d43a62b470117dbc7225cd6 227 Gene3D G3DSA:1.20.1050.10 103 212 1.1E-49 T 31-10-2018 DY252_01425 6ff4de192d43a62b470117dbc7225cd6 227 Gene3D G3DSA:3.40.30.10 22 214 1.1E-49 T 31-10-2018 DY252_01425 6ff4de192d43a62b470117dbc7225cd6 227 Pfam PF13417 Glutathione S-transferase, N-terminal domain 22 94 2.5E-18 T 31-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DY252_00995 d0a486635dcd992bf86d1cb3e23d8956 264 SUPERFAMILY SSF53335 6 261 4.14E-41 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_00995 d0a486635dcd992bf86d1cb3e23d8956 264 Gene3D G3DSA:3.40.50.150 10 260 1.7E-37 T 31-10-2018 DY252_00995 d0a486635dcd992bf86d1cb3e23d8956 264 Pfam PF08241 Methyltransferase domain 58 153 3.0E-21 T 31-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DY252_10430 34a02d44a942f426bd7b1995b5161825 466 Gene3D G3DSA:3.30.565.10 319 463 5.9E-15 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_10430 34a02d44a942f426bd7b1995b5161825 466 SUPERFAMILY SSF55874 323 449 3.8E-17 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_10430 34a02d44a942f426bd7b1995b5161825 466 SMART SM00388 246 312 6.3E-9 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_10430 34a02d44a942f426bd7b1995b5161825 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 366 446 1.1E-8 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_10430 34a02d44a942f426bd7b1995b5161825 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 311 1.3E-7 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_10430 34a02d44a942f426bd7b1995b5161825 466 Pfam PF08521 Two-component sensor kinase N-terminal 23 166 5.3E-6 T 31-10-2018 IPR013727 Two-component sensor kinase, N-terminal DY252_10430 34a02d44a942f426bd7b1995b5161825 466 SUPERFAMILY SSF47384 230 311 5.89E-12 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_10430 34a02d44a942f426bd7b1995b5161825 466 SMART SM00387 359 465 1.1E-10 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_10430 34a02d44a942f426bd7b1995b5161825 466 Gene3D G3DSA:1.10.287.130 197 313 1.3E-15 T 31-10-2018 DY252_21895 3c308ee3d64b7b5490bdff90965d6f09 454 SMART SM00448 3 114 5.4E-30 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_21895 3c308ee3d64b7b5490bdff90965d6f09 454 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 31-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DY252_21895 3c308ee3d64b7b5490bdff90965d6f09 454 SMART SM00382 164 307 6.3E-12 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_21895 3c308ee3d64b7b5490bdff90965d6f09 454 Pfam PF02954 Bacterial regulatory protein, Fis family 406 446 2.6E-10 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_21895 3c308ee3d64b7b5490bdff90965d6f09 454 SUPERFAMILY SSF52540 144 380 2.17E-66 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_21895 3c308ee3d64b7b5490bdff90965d6f09 454 SUPERFAMILY SSF52172 3 189 9.68E-43 T 31-10-2018 IPR011006 CheY-like superfamily DY252_21895 3c308ee3d64b7b5490bdff90965d6f09 454 SUPERFAMILY SSF46689 356 448 4.66E-10 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_21895 3c308ee3d64b7b5490bdff90965d6f09 454 Gene3D G3DSA:3.40.50.300 138 314 1.1E-60 T 31-10-2018 DY252_21895 3c308ee3d64b7b5490bdff90965d6f09 454 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 31-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DY252_21895 3c308ee3d64b7b5490bdff90965d6f09 454 Pfam PF00072 Response regulator receiver domain 5 114 1.9E-28 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_21895 3c308ee3d64b7b5490bdff90965d6f09 454 Gene3D G3DSA:1.10.10.60 399 450 1.3E-12 T 31-10-2018 DY252_21895 3c308ee3d64b7b5490bdff90965d6f09 454 Gene3D G3DSA:3.40.50.2300 1 137 1.3E-36 T 31-10-2018 DY252_21895 3c308ee3d64b7b5490bdff90965d6f09 454 Gene3D G3DSA:1.10.8.60 315 387 5.9E-19 T 31-10-2018 DY252_21895 3c308ee3d64b7b5490bdff90965d6f09 454 Pfam PF00158 Sigma-54 interaction domain 144 310 1.9E-67 T 31-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DY252_12825 c3a9873b172e82cd0787b1c1a3817995 96 SUPERFAMILY SSF47729 6 95 2.5E-27 T 31-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DY252_12825 c3a9873b172e82cd0787b1c1a3817995 96 PRINTS PR01727 Prokaryotic integration host factor signature 63 76 4.1E-13 T 31-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DY252_12825 c3a9873b172e82cd0787b1c1a3817995 96 PRINTS PR01727 Prokaryotic integration host factor signature 45 60 4.1E-13 T 31-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DY252_12825 c3a9873b172e82cd0787b1c1a3817995 96 PRINTS PR01727 Prokaryotic integration host factor signature 79 93 4.1E-13 T 31-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DY252_12825 c3a9873b172e82cd0787b1c1a3817995 96 SMART SM00411 6 95 4.4E-31 T 31-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DY252_12825 c3a9873b172e82cd0787b1c1a3817995 96 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 4 96 25.887 T 31-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 DY252_12825 c3a9873b172e82cd0787b1c1a3817995 96 Gene3D G3DSA:4.10.520.10 4 96 6.3E-30 T 31-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DY252_12825 c3a9873b172e82cd0787b1c1a3817995 96 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 51 70 - T 31-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DY252_12825 c3a9873b172e82cd0787b1c1a3817995 96 Pfam PF00216 Bacterial DNA-binding protein 7 95 5.6E-28 T 31-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DY252_12825 c3a9873b172e82cd0787b1c1a3817995 96 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 5 95 1.4E-41 T 31-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 DY252_12970 30d48f0cbc8f2d4a6865e70c3f731765 335 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 31-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DY252_12970 30d48f0cbc8f2d4a6865e70c3f731765 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 5.2E-52 T 31-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DY252_12970 30d48f0cbc8f2d4a6865e70c3f731765 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 5.2E-52 T 31-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DY252_12970 30d48f0cbc8f2d4a6865e70c3f731765 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 5.2E-52 T 31-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DY252_12970 30d48f0cbc8f2d4a6865e70c3f731765 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 5.2E-52 T 31-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DY252_12970 30d48f0cbc8f2d4a6865e70c3f731765 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 5.2E-52 T 31-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DY252_12970 30d48f0cbc8f2d4a6865e70c3f731765 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 5.2E-52 T 31-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DY252_12970 30d48f0cbc8f2d4a6865e70c3f731765 335 PIRSF PIRSF001415 3 335 8.3E-140 T 31-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DY252_12970 30d48f0cbc8f2d4a6865e70c3f731765 335 Gene3D G3DSA:3.20.20.70 3 335 2.6E-136 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_12970 30d48f0cbc8f2d4a6865e70c3f731765 335 SUPERFAMILY SSF51569 7 334 5.71E-134 T 31-10-2018 DY252_12970 30d48f0cbc8f2d4a6865e70c3f731765 335 SMART SM01004 10 333 4.9E-217 T 31-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DY252_12970 30d48f0cbc8f2d4a6865e70c3f731765 335 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 331 8.3E-132 T 31-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DY252_20635 796129c332bb7c28a3afde8261ba5af9 543 ProSitePatterns PS00211 ABC transporters family signature. 418 432 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_20635 796129c332bb7c28a3afde8261ba5af9 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 499 529 0.0081 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_20635 796129c332bb7c28a3afde8261ba5af9 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 271 0.0019 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_20635 796129c332bb7c28a3afde8261ba5af9 543 Pfam PF00005 ABC transporter 294 446 2.0E-30 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_20635 796129c332bb7c28a3afde8261ba5af9 543 SUPERFAMILY SSF52540 25 259 7.38E-53 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_20635 796129c332bb7c28a3afde8261ba5af9 543 Pfam PF00005 ABC transporter 30 187 1.8E-20 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_20635 796129c332bb7c28a3afde8261ba5af9 543 Gene3D G3DSA:3.40.50.300 3 275 1.1E-68 T 31-10-2018 DY252_20635 796129c332bb7c28a3afde8261ba5af9 543 Gene3D G3DSA:3.40.50.300 276 540 5.9E-77 T 31-10-2018 DY252_20635 796129c332bb7c28a3afde8261ba5af9 543 SUPERFAMILY SSF52540 277 515 1.52E-67 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_20635 796129c332bb7c28a3afde8261ba5af9 543 SMART SM00382 303 495 1.3E-18 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_20635 796129c332bb7c28a3afde8261ba5af9 543 SMART SM00382 38 237 1.2E-10 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_17235 77ce250b683439536e0b0d5dd7b5ff5b 790 SUPERFAMILY SSF57184 27 206 1.27E-9 T 31-10-2018 IPR009030 Growth factor receptor cysteine-rich domain superfamily DY252_17235 77ce250b683439536e0b0d5dd7b5ff5b 790 SMART SM00706 648 682 6.0 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_17235 77ce250b683439536e0b0d5dd7b5ff5b 790 SMART SM00706 683 717 1.0 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_17235 77ce250b683439536e0b0d5dd7b5ff5b 790 SMART SM00706 614 647 33.0 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_20525 ced97cd9f89fd88c8b3057d5c2097784 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.7E-6 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_20525 ced97cd9f89fd88c8b3057d5c2097784 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.7E-6 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_20525 ced97cd9f89fd88c8b3057d5c2097784 237 SMART SM00345 13 72 3.3E-21 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_20525 ced97cd9f89fd88c8b3057d5c2097784 237 Gene3D G3DSA:3.40.1410.10 80 237 2.5E-32 T 31-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DY252_20525 ced97cd9f89fd88c8b3057d5c2097784 237 Gene3D G3DSA:1.10.10.10 7 76 1.3E-21 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_20525 ced97cd9f89fd88c8b3057d5c2097784 237 SUPERFAMILY SSF46785 2 74 8.59E-20 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_20525 ced97cd9f89fd88c8b3057d5c2097784 237 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 5 237 2.3E-74 T 31-10-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF DY252_20525 ced97cd9f89fd88c8b3057d5c2097784 237 SUPERFAMILY SSF64288 62 236 8.11E-37 T 31-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DY252_20525 ced97cd9f89fd88c8b3057d5c2097784 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 72 4.0E-20 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_20525 ced97cd9f89fd88c8b3057d5c2097784 237 SMART SM00866 93 233 1.6E-26 T 31-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DY252_20525 ced97cd9f89fd88c8b3057d5c2097784 237 Pfam PF07702 UTRA domain 95 232 1.5E-28 T 31-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DY252_11295 074c09855f297345905d33d59f20ebf4 812 Pfam PF13432 Tetratricopeptide repeat 10 67 1.2E-4 T 31-10-2018 DY252_11295 074c09855f297345905d33d59f20ebf4 812 Pfam PF13432 Tetratricopeptide repeat 260 308 0.0011 T 31-10-2018 DY252_11295 074c09855f297345905d33d59f20ebf4 812 Gene3D G3DSA:3.40.50.11380 440 605 4.0E-51 T 31-10-2018 DY252_11295 074c09855f297345905d33d59f20ebf4 812 SMART SM00028 140 173 3.6 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_11295 074c09855f297345905d33d59f20ebf4 812 SMART SM00028 106 139 6.0E-7 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_11295 074c09855f297345905d33d59f20ebf4 812 SMART SM00028 208 241 0.11 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_11295 074c09855f297345905d33d59f20ebf4 812 SMART SM00028 276 309 95.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_11295 074c09855f297345905d33d59f20ebf4 812 SMART SM00028 72 105 19.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_11295 074c09855f297345905d33d59f20ebf4 812 SMART SM00028 174 207 12.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_11295 074c09855f297345905d33d59f20ebf4 812 SMART SM00028 4 37 220.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_11295 074c09855f297345905d33d59f20ebf4 812 Pfam PF13844 Glycosyl transferase family 41 684 781 3.0E-6 T 31-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 DY252_11295 074c09855f297345905d33d59f20ebf4 812 Gene3D G3DSA:3.40.50.2000 608 781 4.0E-51 T 31-10-2018 DY252_11295 074c09855f297345905d33d59f20ebf4 812 Pfam PF14559 Tetratricopeptide repeat 185 250 3.1E-9 T 31-10-2018 DY252_11295 074c09855f297345905d33d59f20ebf4 812 SUPERFAMILY SSF53756 452 801 2.89E-5 T 31-10-2018 DY252_11295 074c09855f297345905d33d59f20ebf4 812 SUPERFAMILY SSF48452 13 304 9.8E-41 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_11295 074c09855f297345905d33d59f20ebf4 812 Pfam PF00515 Tetratricopeptide repeat 108 138 3.4E-8 T 31-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 DY252_11295 074c09855f297345905d33d59f20ebf4 812 Gene3D G3DSA:1.25.40.10 5 358 3.2E-58 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_13045 9c19a373fcd857ec4c24316addd5707f 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 557 604 0.022 T 31-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DY252_13045 9c19a373fcd857ec4c24316addd5707f 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 655 692 0.0016 T 31-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DY252_13045 9c19a373fcd857ec4c24316addd5707f 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 609 643 0.027 T 31-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DY252_13045 9c19a373fcd857ec4c24316addd5707f 747 SMART SM00434 17 469 1.4E-240 T 31-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DY252_13045 9c19a373fcd857ec4c24316addd5707f 747 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 17 746 4.2E-276 T 31-10-2018 DY252_13045 9c19a373fcd857ec4c24316addd5707f 747 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 38 468 1.1E-143 T 31-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DY252_13045 9c19a373fcd857ec4c24316addd5707f 747 SUPERFAMILY SSF101904 510 745 1.57E-48 T 31-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DY252_13045 9c19a373fcd857ec4c24316addd5707f 747 SUPERFAMILY SSF56719 37 486 5.62E-160 T 31-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DY252_13045 9c19a373fcd857ec4c24316addd5707f 747 Gene3D G3DSA:3.90.199.10 38 496 3.1E-187 T 31-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DY252_13045 9c19a373fcd857ec4c24316addd5707f 747 Gene3D G3DSA:1.10.268.10 377 462 3.1E-187 T 31-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DY252_13045 9c19a373fcd857ec4c24316addd5707f 747 Gene3D G3DSA:3.30.1360.40 243 339 3.1E-187 T 31-10-2018 DY252_13045 9c19a373fcd857ec4c24316addd5707f 747 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 10 747 33.074 T 31-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DY252_13045 9c19a373fcd857ec4c24316addd5707f 747 Gene3D G3DSA:2.120.10.90 513 698 1.8E-14 T 31-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DY252_03385 d0a1736da965a4b5ad468f9bfe325e3c 297 Gene3D G3DSA:3.30.2010.10 80 167 5.6E-12 T 31-10-2018 DY252_03385 d0a1736da965a4b5ad468f9bfe325e3c 297 Pfam PF01435 Peptidase family M48 88 280 3.0E-23 T 31-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DY252_04390 bd481422311bf627e2763ac07819c8da 397 Pfam PF07687 Peptidase dimerisation domain 194 288 1.9E-10 T 31-10-2018 IPR011650 Peptidase M20, dimerisation domain DY252_04390 bd481422311bf627e2763ac07819c8da 397 PIRSF PIRSF005962 6 397 1.0E-129 T 31-10-2018 IPR017439 Amidohydrolase GO:0016787 DY252_04390 bd481422311bf627e2763ac07819c8da 397 SUPERFAMILY SSF53187 12 394 2.04E-86 T 31-10-2018 DY252_04390 bd481422311bf627e2763ac07819c8da 397 Gene3D G3DSA:3.40.630.10 22 379 4.3E-138 T 31-10-2018 DY252_04390 bd481422311bf627e2763ac07819c8da 397 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 22 381 1.4E-113 T 31-10-2018 IPR017439 Amidohydrolase GO:0016787 DY252_04390 bd481422311bf627e2763ac07819c8da 397 SUPERFAMILY SSF55031 191 304 3.01E-31 T 31-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DY252_04390 bd481422311bf627e2763ac07819c8da 397 Gene3D G3DSA:3.30.70.360 189 303 4.3E-138 T 31-10-2018 DY252_04390 bd481422311bf627e2763ac07819c8da 397 Pfam PF01546 Peptidase family M20/M25/M40 81 391 1.8E-33 T 31-10-2018 IPR002933 Peptidase M20 GO:0016787 DY252_14870 578f715674210bb05f20c420be7d4ccb 399 Pfam PF11741 AMIN domain 33 127 1.8E-15 T 31-10-2018 IPR021731 AMIN domain DY252_14870 578f715674210bb05f20c420be7d4ccb 399 Gene3D G3DSA:3.40.630.40 172 399 1.2E-72 T 31-10-2018 DY252_14870 578f715674210bb05f20c420be7d4ccb 399 Gene3D G3DSA:2.60.40.3500 15 130 1.7E-26 T 31-10-2018 DY252_14870 578f715674210bb05f20c420be7d4ccb 399 SUPERFAMILY SSF53187 175 394 7.22E-52 T 31-10-2018 DY252_14870 578f715674210bb05f20c420be7d4ccb 399 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 177 391 1.4E-47 T 31-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DY252_14870 578f715674210bb05f20c420be7d4ccb 399 SMART SM00646 237 391 1.8E-46 T 31-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DY252_11360 cddc3be28292452101675442f40ba120 488 SUPERFAMILY SSF53383 123 478 1.79E-72 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_11360 cddc3be28292452101675442f40ba120 488 Gene3D G3DSA:3.40.640.10 161 376 1.6E-65 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_11360 cddc3be28292452101675442f40ba120 488 Gene3D G3DSA:1.10.10.10 13 122 7.2E-19 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_11360 cddc3be28292452101675442f40ba120 488 Gene3D G3DSA:3.90.1150.10 128 473 1.6E-65 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_11360 cddc3be28292452101675442f40ba120 488 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 1.8E-14 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_11360 cddc3be28292452101675442f40ba120 488 SUPERFAMILY SSF46785 12 81 4.51E-17 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_11360 cddc3be28292452101675442f40ba120 488 SMART SM00345 19 78 7.3E-15 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_11360 cddc3be28292452101675442f40ba120 488 Pfam PF00155 Aminotransferase class I and II 172 471 2.8E-19 T 31-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DY252_01500 6f1eec2be03b7c821945ae5181e73de8 165 Hamap MF_00821 Protein-export protein SecB [secB]. 1 157 27.684 T 31-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DY252_01500 6f1eec2be03b7c821945ae5181e73de8 165 Gene3D G3DSA:3.10.420.10 2 164 3.7E-53 T 31-10-2018 IPR035958 SecB-like superfamily DY252_01500 6f1eec2be03b7c821945ae5181e73de8 165 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 22 152 6.5E-36 T 31-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DY252_01500 6f1eec2be03b7c821945ae5181e73de8 165 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 109 131 2.3E-17 T 31-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DY252_01500 6f1eec2be03b7c821945ae5181e73de8 165 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 25 42 2.3E-17 T 31-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DY252_01500 6f1eec2be03b7c821945ae5181e73de8 165 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 135 153 2.3E-17 T 31-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DY252_01500 6f1eec2be03b7c821945ae5181e73de8 165 SUPERFAMILY SSF54611 13 152 1.98E-43 T 31-10-2018 IPR035958 SecB-like superfamily DY252_01500 6f1eec2be03b7c821945ae5181e73de8 165 Pfam PF02556 Preprotein translocase subunit SecB 17 154 1.1E-48 T 31-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DY252_21125 5daa403557ac3a2696d0b1d033650048 193 SUPERFAMILY SSF53098 4 169 1.93E-26 T 31-10-2018 IPR012337 Ribonuclease H-like superfamily DY252_21125 5daa403557ac3a2696d0b1d033650048 193 Pfam PF00929 Exonuclease 9 160 8.3E-13 T 31-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DY252_21125 5daa403557ac3a2696d0b1d033650048 193 SMART SM00479 4 172 2.4E-15 T 31-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DY252_21125 5daa403557ac3a2696d0b1d033650048 193 Gene3D G3DSA:3.30.420.10 3 177 2.3E-31 T 31-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DY252_13425 4c667e0551f839f95c92d8328affa063 252 SUPERFAMILY SSF55681 8 201 5.88E-51 T 31-10-2018 DY252_13425 4c667e0551f839f95c92d8328affa063 252 Gene3D G3DSA:3.30.930.10 5 201 1.8E-54 T 31-10-2018 DY252_13425 4c667e0551f839f95c92d8328affa063 252 Pfam PF03099 Biotin/lipoate A/B protein ligase family 19 144 7.4E-19 T 31-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DY252_13425 4c667e0551f839f95c92d8328affa063 252 Pfam PF02237 Biotin protein ligase C terminal domain 205 250 1.6E-7 T 31-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DY252_13425 4c667e0551f839f95c92d8328affa063 252 SUPERFAMILY SSF50037 209 250 3.39E-6 T 31-10-2018 IPR008988 Transcriptional repressor, C-terminal DY252_13425 4c667e0551f839f95c92d8328affa063 252 Gene3D G3DSA:2.30.30.100 205 250 1.9E-8 T 31-10-2018 DY252_13425 4c667e0551f839f95c92d8328affa063 252 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 15 247 1.3E-50 T 31-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DY252_00415 36f0fed4877b11d427ea4ed76bf9dca5 246 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 12 225 4.2E-60 T 31-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 DY252_12770 ecc0ef0899f6b569fbd45c9feb3b6666 482 Gene3D G3DSA:3.40.50.300 135 314 5.8E-68 T 31-10-2018 DY252_12770 ecc0ef0899f6b569fbd45c9feb3b6666 482 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 31-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DY252_12770 ecc0ef0899f6b569fbd45c9feb3b6666 482 SUPERFAMILY SSF52172 4 187 1.39E-42 T 31-10-2018 IPR011006 CheY-like superfamily DY252_12770 ecc0ef0899f6b569fbd45c9feb3b6666 482 Gene3D G3DSA:1.10.10.60 388 476 8.2E-21 T 31-10-2018 DY252_12770 ecc0ef0899f6b569fbd45c9feb3b6666 482 Gene3D G3DSA:1.10.8.60 315 387 5.8E-23 T 31-10-2018 DY252_12770 ecc0ef0899f6b569fbd45c9feb3b6666 482 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 456 476 3.4E-12 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_12770 ecc0ef0899f6b569fbd45c9feb3b6666 482 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 439 456 3.4E-12 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_12770 ecc0ef0899f6b569fbd45c9feb3b6666 482 Pfam PF02954 Bacterial regulatory protein, Fis family 433 471 1.8E-12 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_12770 ecc0ef0899f6b569fbd45c9feb3b6666 482 SMART SM00382 163 306 7.3E-11 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_12770 ecc0ef0899f6b569fbd45c9feb3b6666 482 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 8 473 2.1E-217 T 31-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 DY252_12770 ecc0ef0899f6b569fbd45c9feb3b6666 482 Pfam PF00072 Response regulator receiver domain 8 117 7.8E-27 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_12770 ecc0ef0899f6b569fbd45c9feb3b6666 482 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 31-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DY252_12770 ecc0ef0899f6b569fbd45c9feb3b6666 482 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 31-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DY252_12770 ecc0ef0899f6b569fbd45c9feb3b6666 482 SUPERFAMILY SSF52540 143 383 1.61E-73 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12770 ecc0ef0899f6b569fbd45c9feb3b6666 482 Gene3D G3DSA:3.40.50.2300 1 134 8.7E-33 T 31-10-2018 DY252_12770 ecc0ef0899f6b569fbd45c9feb3b6666 482 SUPERFAMILY SSF46689 355 475 9.41E-18 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_12770 ecc0ef0899f6b569fbd45c9feb3b6666 482 SMART SM00448 6 117 1.0E-32 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_12770 ecc0ef0899f6b569fbd45c9feb3b6666 482 Pfam PF00158 Sigma-54 interaction domain 143 309 2.0E-72 T 31-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DY252_02365 82b9930c6277671228f22fc4c8e40807 201 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 162 169 - T 31-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DY252_02365 82b9930c6277671228f22fc4c8e40807 201 SUPERFAMILY SSF54719 89 199 1.09E-45 T 31-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DY252_02365 82b9930c6277671228f22fc4c8e40807 201 SUPERFAMILY SSF46609 1 87 1.57E-33 T 31-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DY252_02365 82b9930c6277671228f22fc4c8e40807 201 Gene3D G3DSA:2.40.500.20 91 201 1.8E-44 T 31-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DY252_02365 82b9930c6277671228f22fc4c8e40807 201 PIRSF PIRSF000349 1 201 1.1E-80 T 31-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DY252_02365 82b9930c6277671228f22fc4c8e40807 201 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 87 1.6E-30 T 31-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DY252_02365 82b9930c6277671228f22fc4c8e40807 201 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 196 8.0E-39 T 31-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DY252_02365 82b9930c6277671228f22fc4c8e40807 201 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.6E-22 T 31-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DY252_02365 82b9930c6277671228f22fc4c8e40807 201 PRINTS PR01703 Manganese superoxide dismutase signature 123 131 3.6E-22 T 31-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DY252_02365 82b9930c6277671228f22fc4c8e40807 201 PRINTS PR01703 Manganese superoxide dismutase signature 160 172 3.6E-22 T 31-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DY252_02365 82b9930c6277671228f22fc4c8e40807 201 PRINTS PR01703 Manganese superoxide dismutase signature 70 83 3.6E-22 T 31-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DY252_02365 82b9930c6277671228f22fc4c8e40807 201 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.6E-22 T 31-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DY252_02365 82b9930c6277671228f22fc4c8e40807 201 Gene3D G3DSA:1.10.287.990 20 86 1.8E-20 T 31-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DY252_11620 f94ec7af4002714875a678ec74f05c87 810 ProSitePatterns PS01175 Ribonuclease II family signature. 553 577 - T 31-10-2018 IPR022966 Ribonuclease II/R, conserved site DY252_11620 f94ec7af4002714875a678ec74f05c87 810 Pfam PF00773 RNB domain 255 584 1.8E-94 T 31-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DY252_11620 f94ec7af4002714875a678ec74f05c87 810 SMART SM00955 255 586 4.5E-163 T 31-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DY252_11620 f94ec7af4002714875a678ec74f05c87 810 SMART SM00316 632 715 8.3E-13 T 31-10-2018 IPR022967 RNA-binding domain, S1 DY252_11620 f94ec7af4002714875a678ec74f05c87 810 SUPERFAMILY SSF50249 632 713 9.24E-19 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_11620 f94ec7af4002714875a678ec74f05c87 810 Hamap MF_01895 Ribonuclease R [rnr]. 31 715 53.176 T 31-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 DY252_11620 f94ec7af4002714875a678ec74f05c87 810 Gene3D G3DSA:2.40.50.140 636 729 5.6E-17 T 31-10-2018 DY252_11620 f94ec7af4002714875a678ec74f05c87 810 TIGRFAM TIGR02063 RNase_R: ribonuclease R 12 715 2.4E-211 T 31-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 DY252_11620 f94ec7af4002714875a678ec74f05c87 810 Pfam PF00575 S1 RNA binding domain 631 712 3.3E-11 T 31-10-2018 IPR003029 S1 domain GO:0003676 DY252_11620 f94ec7af4002714875a678ec74f05c87 810 SUPERFAMILY SSF50249 226 631 4.4E-132 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_11620 f94ec7af4002714875a678ec74f05c87 810 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 122 711 1.6E-155 T 31-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 DY252_17335 cb37413339095641b35a6952de5c5881 884 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 654 704 4.8E-17 T 31-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DY252_17335 cb37413339095641b35a6952de5c5881 884 SMART SM00863 654 704 4.1E-20 T 31-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DY252_17335 cb37413339095641b35a6952de5c5881 884 Gene3D G3DSA:3.10.310.40 775 883 1.6E-27 T 31-10-2018 DY252_17335 cb37413339095641b35a6952de5c5881 884 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 884 193.97 T 31-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 DY252_17335 cb37413339095641b35a6952de5c5881 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 1.8E-30 T 31-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DY252_17335 cb37413339095641b35a6952de5c5881 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 1.8E-30 T 31-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DY252_17335 cb37413339095641b35a6952de5c5881 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 1.8E-30 T 31-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DY252_17335 cb37413339095641b35a6952de5c5881 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 1.8E-30 T 31-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DY252_17335 cb37413339095641b35a6952de5c5881 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 1.8E-30 T 31-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DY252_17335 cb37413339095641b35a6952de5c5881 884 Gene3D G3DSA:3.30.930.10 1 241 5.1E-111 T 31-10-2018 DY252_17335 cb37413339095641b35a6952de5c5881 884 Gene3D G3DSA:3.30.980.10 557 703 8.4E-48 T 31-10-2018 DY252_17335 cb37413339095641b35a6952de5c5881 884 SUPERFAMILY SSF101353 246 461 8.37E-56 T 31-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 DY252_17335 cb37413339095641b35a6952de5c5881 884 Gene3D G3DSA:3.30.54.20 625 685 8.4E-48 T 31-10-2018 DY252_17335 cb37413339095641b35a6952de5c5881 884 SUPERFAMILY SSF55186 553 716 2.09E-49 T 31-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DY252_17335 cb37413339095641b35a6952de5c5881 884 Pfam PF02272 DHHA1 domain 740 882 3.0E-21 T 31-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DY252_17335 cb37413339095641b35a6952de5c5881 884 Pfam PF01411 tRNA synthetases class II (A) 6 556 7.6E-209 T 31-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 DY252_17335 cb37413339095641b35a6952de5c5881 884 Gene3D G3DSA:2.40.30.130 460 551 1.8E-7 T 31-10-2018 DY252_17335 cb37413339095641b35a6952de5c5881 884 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 865 6.7E-285 T 31-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DY252_17335 cb37413339095641b35a6952de5c5881 884 SUPERFAMILY SSF55681 3 245 5.96E-110 T 31-10-2018 DY252_17335 cb37413339095641b35a6952de5c5881 884 SUPERFAMILY SSF50447 454 552 6.12E-17 T 31-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DY252_13275 3e11f197fd293ee97ef2897b5e3670fc 468 SUPERFAMILY SSF48163 301 465 3.79E-35 T 31-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DY252_13275 3e11f197fd293ee97ef2897b5e3670fc 468 Gene3D G3DSA:1.10.10.350 369 466 1.2E-23 T 31-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DY252_13275 3e11f197fd293ee97ef2897b5e3670fc 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 2.4E-25 T 31-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DY252_13275 3e11f197fd293ee97ef2897b5e3670fc 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 2.4E-25 T 31-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DY252_13275 3e11f197fd293ee97ef2897b5e3670fc 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 2.4E-25 T 31-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DY252_13275 3e11f197fd293ee97ef2897b5e3670fc 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 2.4E-25 T 31-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DY252_13275 3e11f197fd293ee97ef2897b5e3670fc 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 2.4E-25 T 31-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DY252_13275 3e11f197fd293ee97ef2897b5e3670fc 468 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 306 2.7E-91 T 31-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DY252_13275 3e11f197fd293ee97ef2897b5e3670fc 468 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 467 31.036 T 31-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DY252_13275 3e11f197fd293ee97ef2897b5e3670fc 468 SUPERFAMILY SSF52374 3 300 5.36E-107 T 31-10-2018 DY252_13275 3e11f197fd293ee97ef2897b5e3670fc 468 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 465 9.8E-155 T 31-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DY252_13275 3e11f197fd293ee97ef2897b5e3670fc 468 Gene3D G3DSA:3.40.50.620 1 316 6.1E-127 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_13275 3e11f197fd293ee97ef2897b5e3670fc 468 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 31-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_13480 7de8f304e1495a941c437bd750b45fa5 392 Gene3D G3DSA:1.10.645.20 6 392 2.2E-183 T 31-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13480 7de8f304e1495a941c437bd750b45fa5 392 SUPERFAMILY SSF56762 18 392 1.13E-145 T 31-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13480 7de8f304e1495a941c437bd750b45fa5 392 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 45 56 - T 31-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13480 7de8f304e1495a941c437bd750b45fa5 392 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 122 392 1.2E-127 T 31-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13480 7de8f304e1495a941c437bd750b45fa5 392 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 7 392 2.2E-183 T 31-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13480 7de8f304e1495a941c437bd750b45fa5 392 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 392 50.439 T 31-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_02670 4b976d97f77a3233b53f879de0d5d8bb 252 SUPERFAMILY SSF51735 3 251 2.79E-66 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_02670 4b976d97f77a3233b53f879de0d5d8bb 252 Gene3D G3DSA:3.40.50.720 1 252 5.9E-56 T 31-10-2018 DY252_02670 4b976d97f77a3233b53f879de0d5d8bb 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 249 1.4E-82 T 31-10-2018 DY252_02670 4b976d97f77a3233b53f879de0d5d8bb 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 3.9E-11 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02670 4b976d97f77a3233b53f879de0d5d8bb 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.9E-11 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02670 4b976d97f77a3233b53f879de0d5d8bb 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.9E-11 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02670 4b976d97f77a3233b53f879de0d5d8bb 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.9E-11 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02670 4b976d97f77a3233b53f879de0d5d8bb 252 PIRSF PIRSF000094 1 252 1.0E-91 T 31-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DY252_10345 217cfc4ce199bcf632e4f6d3d885bf42 592 Pfam PF17287 POTRA domain 181 235 4.1E-12 T 31-10-2018 IPR035251 ShlB, POTRA domain DY252_10345 217cfc4ce199bcf632e4f6d3d885bf42 592 Gene3D G3DSA:3.10.20.310 109 183 7.7E-12 T 31-10-2018 DY252_10345 217cfc4ce199bcf632e4f6d3d885bf42 592 PIRSF PIRSF029745 27 592 1.1E-116 T 31-10-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 DY252_10345 217cfc4ce199bcf632e4f6d3d885bf42 592 Gene3D G3DSA:2.40.160.50 220 592 1.0E-69 T 31-10-2018 DY252_10345 217cfc4ce199bcf632e4f6d3d885bf42 592 Pfam PF08479 POTRA domain, ShlB-type 107 180 3.2E-17 T 31-10-2018 IPR013686 Polypeptide-transport-associated, ShlB-type DY252_10345 217cfc4ce199bcf632e4f6d3d885bf42 592 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 240 554 2.0E-70 T 31-10-2018 IPR005565 Haemolysin activator HlyB, C-terminal DY252_16795 2d7c1c29e0b079c4fe3415c42f4a8962 608 SUPERFAMILY SSF81665 58 291 9.02E-9 T 31-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DY252_16795 2d7c1c29e0b079c4fe3415c42f4a8962 608 Gene3D G3DSA:3.40.50.1000 278 529 3.8E-60 T 31-10-2018 IPR023214 HAD superfamily DY252_16795 2d7c1c29e0b079c4fe3415c42f4a8962 608 SUPERFAMILY SSF81653 116 205 3.01E-18 T 31-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DY252_16795 2d7c1c29e0b079c4fe3415c42f4a8962 608 SUPERFAMILY SSF56784 298 593 6.39E-29 T 31-10-2018 IPR036412 HAD-like superfamily DY252_16795 2d7c1c29e0b079c4fe3415c42f4a8962 608 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 493 512 5.3E-15 T 31-10-2018 DY252_16795 2d7c1c29e0b079c4fe3415c42f4a8962 608 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 417 428 5.3E-15 T 31-10-2018 DY252_16795 2d7c1c29e0b079c4fe3415c42f4a8962 608 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 156 170 5.3E-15 T 31-10-2018 DY252_16795 2d7c1c29e0b079c4fe3415c42f4a8962 608 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 298 312 5.3E-15 T 31-10-2018 DY252_16795 2d7c1c29e0b079c4fe3415c42f4a8962 608 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 441 451 5.3E-15 T 31-10-2018 DY252_16795 2d7c1c29e0b079c4fe3415c42f4a8962 608 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 300 306 - T 31-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DY252_16795 2d7c1c29e0b079c4fe3415c42f4a8962 608 Pfam PF00122 E1-E2 ATPase 108 278 2.5E-35 T 31-10-2018 DY252_16795 2d7c1c29e0b079c4fe3415c42f4a8962 608 Gene3D G3DSA:2.70.150.20 99 211 1.0E-27 T 31-10-2018 DY252_16795 2d7c1c29e0b079c4fe3415c42f4a8962 608 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 78 573 5.9E-46 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_16795 2d7c1c29e0b079c4fe3415c42f4a8962 608 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 56 595 2.3E-145 T 31-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DY252_16795 2d7c1c29e0b079c4fe3415c42f4a8962 608 Gene3D G3DSA:3.40.1110.10 308 424 3.8E-60 T 31-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DY252_16795 2d7c1c29e0b079c4fe3415c42f4a8962 608 Pfam PF00702 haloacid dehalogenase-like hydrolase 295 506 1.8E-24 T 31-10-2018 DY252_16795 2d7c1c29e0b079c4fe3415c42f4a8962 608 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 56 596 3.0E-127 T 31-10-2018 DY252_14965 6d79bff0c3de7399d7decd9f4ca9c338 108 Gene3D G3DSA:3.30.1390.10 4 108 2.3E-45 T 31-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DY252_14965 6d79bff0c3de7399d7decd9f4ca9c338 108 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 25 104 5.1E-37 T 31-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 DY252_14965 6d79bff0c3de7399d7decd9f4ca9c338 108 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 1 103 29.798 T 31-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS DY252_14965 6d79bff0c3de7399d7decd9f4ca9c338 108 SUPERFAMILY SSF54736 23 107 5.75E-34 T 31-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DY252_05385 8b5d04f73bdcb780f8480b47e003c6e2 500 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 21 442 2.1E-144 T 31-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane DY252_15490 ddbd63bc21412d91f4140a4260c89c4e 551 Gene3D G3DSA:3.50.7.10 173 379 7.0E-241 T 31-10-2018 IPR027409 GroEL-like apical domain superfamily DY252_15490 ddbd63bc21412d91f4140a4260c89c4e 551 SUPERFAMILY SSF54849 138 203 1.28E-24 T 31-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DY252_15490 ddbd63bc21412d91f4140a4260c89c4e 551 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 1.6E-262 T 31-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DY252_15490 ddbd63bc21412d91f4140a4260c89c4e 551 Gene3D G3DSA:1.10.560.10 8 522 7.0E-241 T 31-10-2018 IPR027413 GroEL-like equatorial domain superfamily DY252_15490 ddbd63bc21412d91f4140a4260c89c4e 551 SUPERFAMILY SSF52029 184 376 5.23E-87 T 31-10-2018 IPR027409 GroEL-like apical domain superfamily DY252_15490 ddbd63bc21412d91f4140a4260c89c4e 551 Gene3D G3DSA:3.30.260.10 138 410 7.0E-241 T 31-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DY252_15490 ddbd63bc21412d91f4140a4260c89c4e 551 SUPERFAMILY SSF48592 7 522 1.07E-77 T 31-10-2018 IPR027413 GroEL-like equatorial domain superfamily DY252_15490 ddbd63bc21412d91f4140a4260c89c4e 551 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 31-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DY252_15490 ddbd63bc21412d91f4140a4260c89c4e 551 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 525 7.0E-101 T 31-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 DY252_15490 ddbd63bc21412d91f4140a4260c89c4e 551 PRINTS PR00298 60kDa chaperonin signature 398 419 2.2E-74 T 31-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DY252_15490 ddbd63bc21412d91f4140a4260c89c4e 551 PRINTS PR00298 60kDa chaperonin signature 350 375 2.2E-74 T 31-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DY252_15490 ddbd63bc21412d91f4140a4260c89c4e 551 PRINTS PR00298 60kDa chaperonin signature 268 291 2.2E-74 T 31-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DY252_15490 ddbd63bc21412d91f4140a4260c89c4e 551 PRINTS PR00298 60kDa chaperonin signature 83 110 2.2E-74 T 31-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DY252_15490 ddbd63bc21412d91f4140a4260c89c4e 551 PRINTS PR00298 60kDa chaperonin signature 27 53 2.2E-74 T 31-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DY252_15490 ddbd63bc21412d91f4140a4260c89c4e 551 Hamap MF_00600 60 kDa chaperonin [groL]. 2 549 42.516 T 31-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 SMART SM00387 26 182 3.1E-4 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 621 30.937 T 31-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 SUPERFAMILY SSF54211 220 472 2.28E-96 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 PIRSF PIRSF002583 1 624 3.2E-223 T 31-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 180 1.1E-11 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 Gene3D G3DSA:3.40.50.11260 387 473 1.7E-32 T 31-10-2018 DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 SUPERFAMILY SSF55874 3 210 1.18E-66 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 Gene3D G3DSA:3.30.565.10 1 220 5.5E-79 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 Pfam PF00183 Hsp90 protein 214 624 1.5E-125 T 31-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 24 33 - T 31-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 Gene3D G3DSA:3.30.230.80 221 386 1.4E-66 T 31-10-2018 DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 PRINTS PR00775 90kDa heat shock protein signature 4 24 3.9E-62 T 31-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 PRINTS PR00775 90kDa heat shock protein signature 120 142 3.9E-62 T 31-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 PRINTS PR00775 90kDa heat shock protein signature 92 109 3.9E-62 T 31-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 PRINTS PR00775 90kDa heat shock protein signature 25 47 3.9E-62 T 31-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 PRINTS PR00775 90kDa heat shock protein signature 188 206 3.9E-62 T 31-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 PRINTS PR00775 90kDa heat shock protein signature 74 91 3.9E-62 T 31-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 PRINTS PR00775 90kDa heat shock protein signature 170 187 3.9E-62 T 31-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 SUPERFAMILY SSF110942 505 621 7.19E-30 T 31-10-2018 IPR037196 HSP90, C-terminal domain DY252_18480 57ab8cba1d665be4aed9fa0618e1d3f1 624 Gene3D G3DSA:1.20.120.790 483 621 2.2E-36 T 31-10-2018 IPR037196 HSP90, C-terminal domain DY252_09670 7fba7d6e2f5f8bf18a5cf899cab13c1a 678 Pfam PF00501 AMP-binding enzyme 7 95 3.2E-10 T 31-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DY252_09670 7fba7d6e2f5f8bf18a5cf899cab13c1a 678 Pfam PF00501 AMP-binding enzyme 115 350 1.4E-40 T 31-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DY252_09670 7fba7d6e2f5f8bf18a5cf899cab13c1a 678 ProSitePatterns PS00455 Putative AMP-binding domain signature. 117 128 - T 31-10-2018 IPR020845 AMP-binding, conserved site DY252_09670 7fba7d6e2f5f8bf18a5cf899cab13c1a 678 SMART SM01236 528 625 0.0022 T 31-10-2018 DY252_09670 7fba7d6e2f5f8bf18a5cf899cab13c1a 678 Gene3D G3DSA:3.40.50.12780 2 343 1.7E-59 T 31-10-2018 DY252_09670 7fba7d6e2f5f8bf18a5cf899cab13c1a 678 SUPERFAMILY SSF48613 451 670 1.36E-51 T 31-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DY252_09670 7fba7d6e2f5f8bf18a5cf899cab13c1a 678 SUPERFAMILY SSF56801 4 447 1.22E-78 T 31-10-2018 DY252_09670 7fba7d6e2f5f8bf18a5cf899cab13c1a 678 Pfam PF14518 Iron-containing redox enzyme 494 660 9.8E-22 T 31-10-2018 DY252_09670 7fba7d6e2f5f8bf18a5cf899cab13c1a 678 Gene3D G3DSA:1.20.910.10 459 676 1.7E-57 T 31-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DY252_09670 7fba7d6e2f5f8bf18a5cf899cab13c1a 678 Gene3D G3DSA:3.30.300.30 347 448 8.4E-5 T 31-10-2018 DY252_22120 815cd9a5f253d3648472a63c5e779099 209 PIRSF PIRSF006324 2 209 3.6E-54 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_22120 815cd9a5f253d3648472a63c5e779099 209 Pfam PF01810 LysE type translocator 17 206 1.2E-34 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_04285 258e17cb070f57f27c2a68e390d50aa8 159 SUPERFAMILY SSF52833 1 159 2.16E-35 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_04285 258e17cb070f57f27c2a68e390d50aa8 159 Gene3D G3DSA:3.40.30.10 1 159 4.0E-59 T 31-10-2018 DY252_04285 258e17cb070f57f27c2a68e390d50aa8 159 Pfam PF08534 Redoxin 5 156 5.0E-37 T 31-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DY252_11325 afb731657c6c8ab6cb25973dbf9beb9d 464 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 157 452 7.5E-52 T 31-10-2018 IPR019285 Protein of unknown function DUF2336 DY252_11325 afb731657c6c8ab6cb25973dbf9beb9d 464 SUPERFAMILY SSF48371 25 140 2.48E-9 T 31-10-2018 IPR016024 Armadillo-type fold DY252_11325 afb731657c6c8ab6cb25973dbf9beb9d 464 Gene3D G3DSA:1.25.10.10 7 112 6.5E-10 T 31-10-2018 IPR011989 Armadillo-like helical DY252_04080 e51f6e2936cfd641e61eec7dec553e46 272 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 1 36 1.5E-13 T 31-10-2018 IPR011723 Zinc finger/thioredoxin putative DY252_04080 e51f6e2936cfd641e61eec7dec553e46 272 Pfam PF11906 Protein of unknown function (DUF3426) 117 261 5.7E-13 T 31-10-2018 IPR021834 Protein of unknown function DUF3426 DY252_04080 e51f6e2936cfd641e61eec7dec553e46 272 Pfam PF13717 zinc-ribbon domain 1 35 1.6E-13 T 31-10-2018 IPR011723 Zinc finger/thioredoxin putative DY252_12870 12105e9d2d996117e4d9c5b62282730b 384 Gene3D G3DSA:3.90.870.10 2 209 6.4E-88 T 31-10-2018 DY252_12870 12105e9d2d996117e4d9c5b62282730b 384 Pfam PF00925 GTP cyclohydrolase II 213 377 2.3E-36 T 31-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DY252_12870 12105e9d2d996117e4d9c5b62282730b 384 SUPERFAMILY SSF142695 208 380 1.7E-44 T 31-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DY252_12870 12105e9d2d996117e4d9c5b62282730b 384 Gene3D G3DSA:3.40.50.10990 210 382 1.5E-28 T 31-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DY252_12870 12105e9d2d996117e4d9c5b62282730b 384 SUPERFAMILY SSF55821 4 206 8.7E-86 T 31-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DY252_12870 12105e9d2d996117e4d9c5b62282730b 384 PIRSF PIRSF001259 4 384 8.4E-129 T 31-10-2018 DY252_12870 12105e9d2d996117e4d9c5b62282730b 384 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 202 3.1E-72 T 31-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DY252_12870 12105e9d2d996117e4d9c5b62282730b 384 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 4 206 37.788 T 31-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DY252_12870 12105e9d2d996117e4d9c5b62282730b 384 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 10 201 8.7E-82 T 31-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DY252_08525 1fba69b761bf6095e80ff82a446aa40f 174 Gene3D G3DSA:3.30.450.20 9 150 3.4E-22 T 31-10-2018 DY252_08525 1fba69b761bf6095e80ff82a446aa40f 174 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 113 1.1E-11 T 31-10-2018 IPR000014 PAS domain DY252_08525 1fba69b761bf6095e80ff82a446aa40f 174 SUPERFAMILY SSF55785 20 115 1.31E-25 T 31-10-2018 IPR035965 PAS domain superfamily DY252_08525 1fba69b761bf6095e80ff82a446aa40f 174 Pfam PF08447 PAS fold 32 114 2.5E-12 T 31-10-2018 IPR013655 PAS fold-3 GO:0005515 DY252_13080 348d2bdfc37af74e10c7c32362f02f65 249 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 239 7.0E-100 T 31-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DY252_13080 348d2bdfc37af74e10c7c32362f02f65 249 Gene3D G3DSA:3.20.20.70 1 249 9.4E-103 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_13080 348d2bdfc37af74e10c7c32362f02f65 249 SUPERFAMILY SSF63892 5 243 8.76E-97 T 31-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DY252_13080 348d2bdfc37af74e10c7c32362f02f65 249 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 244 124.589 T 31-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DY252_13080 348d2bdfc37af74e10c7c32362f02f65 249 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 240 1.1E-90 T 31-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DY252_10800 21e1d4ccb7f6e5649b9e6cb87ce59b12 155 Gene3D G3DSA:3.90.1180.10 1 143 5.8E-57 T 31-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 DY252_10800 21e1d4ccb7f6e5649b9e6cb87ce59b12 155 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 1.7E-59 T 31-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_10800 21e1d4ccb7f6e5649b9e6cb87ce59b12 155 PIRSF PIRSF002181 1 155 5.8E-51 T 31-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DY252_10800 21e1d4ccb7f6e5649b9e6cb87ce59b12 155 SUPERFAMILY SSF52161 1 141 1.01E-54 T 31-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 DY252_10800 21e1d4ccb7f6e5649b9e6cb87ce59b12 155 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 142 27.253 T 31-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DY252_10800 21e1d4ccb7f6e5649b9e6cb87ce59b12 155 Pfam PF00572 Ribosomal protein L13 14 139 1.5E-52 T 31-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 155 173 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 65 83 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 SUPERFAMILY SSF51120 10 139 9.72E-25 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 PRINTS PR00313 NodO calcium binding signature 105 113 2.4E-11 T 31-10-2018 DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 PRINTS PR00313 NodO calcium binding signature 75 86 2.4E-11 T 31-10-2018 DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 PRINTS PR00313 NodO calcium binding signature 141 149 2.4E-11 T 31-10-2018 DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 PRINTS PR00313 NodO calcium binding signature 150 159 2.4E-11 T 31-10-2018 DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 Gene3D G3DSA:2.150.10.10 69 133 2.5E-14 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 164 182 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 74 92 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 83 101 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 96 112 0.0058 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 41 57 0.0021 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 77 94 0.0056 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 132 148 6.7E-4 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 15 31 0.22 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 59 76 8.4E-4 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 114 130 0.04 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 187 194 19.0 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 167 184 2.8E-4 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 150 166 2.2E-4 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 SUPERFAMILY SSF51120 122 254 3.01E-29 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 Gene3D G3DSA:2.150.10.10 1 61 1.3E-12 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 Gene3D G3DSA:2.150.10.10 134 259 1.7E-32 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_00135 aa4079ec5e6ae1bf09e07bea8820678b 264 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 146 164 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_00825 cc73588ee927ac2994d54f1a27bd43c7 506 Gene3D G3DSA:3.40.50.300 8 240 6.6E-49 T 31-10-2018 DY252_00825 cc73588ee927ac2994d54f1a27bd43c7 506 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 264 454 5.4E-56 T 31-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 DY252_00825 cc73588ee927ac2994d54f1a27bd43c7 506 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 9 496 2.4E-136 T 31-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 DY252_00825 cc73588ee927ac2994d54f1a27bd43c7 506 SUPERFAMILY SSF52317 265 462 6.88E-40 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_00825 cc73588ee927ac2994d54f1a27bd43c7 506 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 505 189.273 T 31-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 DY252_00825 cc73588ee927ac2994d54f1a27bd43c7 506 SUPERFAMILY SSF52540 8 243 1.06E-51 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_00825 cc73588ee927ac2994d54f1a27bd43c7 506 Pfam PF13500 AAA domain 8 205 1.4E-16 T 31-10-2018 DY252_00825 cc73588ee927ac2994d54f1a27bd43c7 506 Gene3D G3DSA:3.40.50.880 265 444 3.7E-14 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_03980 c7e91746032aa42593e3c39e6a888ca1 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 2.0E-38 T 31-10-2018 DY252_03980 c7e91746032aa42593e3c39e6a888ca1 256 Gene3D G3DSA:3.40.50.720 6 254 4.0E-62 T 31-10-2018 DY252_03980 c7e91746032aa42593e3c39e6a888ca1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.7E-19 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_03980 c7e91746032aa42593e3c39e6a888ca1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.7E-19 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_03980 c7e91746032aa42593e3c39e6a888ca1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.7E-19 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_03980 c7e91746032aa42593e3c39e6a888ca1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.7E-19 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_03980 c7e91746032aa42593e3c39e6a888ca1 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 6.7E-19 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_03980 c7e91746032aa42593e3c39e6a888ca1 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.3E-6 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_03980 c7e91746032aa42593e3c39e6a888ca1 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.3E-6 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_03980 c7e91746032aa42593e3c39e6a888ca1 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.3E-6 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_03980 c7e91746032aa42593e3c39e6a888ca1 256 SUPERFAMILY SSF51735 7 243 7.54E-58 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_02130 0bf72baa04d9929f26d7b5dc197354cd 233 SUPERFAMILY SSF51182 2 231 1.75E-74 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_02130 0bf72baa04d9929f26d7b5dc197354cd 233 Gene3D G3DSA:2.60.120.10 12 132 4.2E-55 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_02130 0bf72baa04d9929f26d7b5dc197354cd 233 Pfam PF02678 Pirin 12 119 1.3E-34 T 31-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 DY252_02130 0bf72baa04d9929f26d7b5dc197354cd 233 Gene3D G3DSA:2.60.120.10 133 233 3.1E-32 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_02130 0bf72baa04d9929f26d7b5dc197354cd 233 PIRSF PIRSF006232 1 232 1.9E-53 T 31-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 DY252_05015 9e4ab2cf28f8c88c0be5dbeb4dca0e75 559 Pfam PF00005 ABC transporter 349 500 5.8E-32 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_05015 9e4ab2cf28f8c88c0be5dbeb4dca0e75 559 SUPERFAMILY SSF90123 18 315 5.89E-33 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_05015 9e4ab2cf28f8c88c0be5dbeb4dca0e75 559 Gene3D G3DSA:3.40.50.300 324 558 3.8E-74 T 31-10-2018 DY252_05015 9e4ab2cf28f8c88c0be5dbeb4dca0e75 559 Gene3D G3DSA:1.20.1560.10 1 313 7.4E-25 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_05015 9e4ab2cf28f8c88c0be5dbeb4dca0e75 559 Pfam PF00664 ABC transporter transmembrane region 45 258 1.7E-16 T 31-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DY252_05015 9e4ab2cf28f8c88c0be5dbeb4dca0e75 559 SUPERFAMILY SSF52540 325 557 8.1E-70 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_05015 9e4ab2cf28f8c88c0be5dbeb4dca0e75 559 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_05015 9e4ab2cf28f8c88c0be5dbeb4dca0e75 559 SMART SM00382 358 546 1.1E-14 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_07025 c89d01ae0ed818c4a78837eae6716d24 290 Pfam PF01145 SPFH domain / Band 7 family 26 200 8.3E-28 T 31-10-2018 IPR001107 Band 7 domain DY252_07025 c89d01ae0ed818c4a78837eae6716d24 290 PIRSF PIRSF005651 1 290 1.4E-82 T 31-10-2018 IPR010200 HflC GO:0016021|GO:0052547 DY252_07025 c89d01ae0ed818c4a78837eae6716d24 290 SUPERFAMILY SSF117892 55 189 1.7E-21 T 31-10-2018 IPR036013 Band 7/SPFH domain superfamily DY252_07025 c89d01ae0ed818c4a78837eae6716d24 290 Gene3D G3DSA:3.30.479.30 54 185 1.3E-18 T 31-10-2018 DY252_07025 c89d01ae0ed818c4a78837eae6716d24 290 SMART SM00244 22 183 2.9E-23 T 31-10-2018 IPR001107 Band 7 domain DY252_20380 dcf752b5d63a14d5f7f064aedd7f892c 253 SUPERFAMILY SSF51735 6 250 6.9E-53 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_20380 dcf752b5d63a14d5f7f064aedd7f892c 253 Pfam PF00106 short chain dehydrogenase 7 195 3.8E-37 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_20380 dcf752b5d63a14d5f7f064aedd7f892c 253 Gene3D G3DSA:3.40.50.720 3 249 1.5E-50 T 31-10-2018 DY252_20380 dcf752b5d63a14d5f7f064aedd7f892c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.2E-18 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_20380 dcf752b5d63a14d5f7f064aedd7f892c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.2E-18 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_20380 dcf752b5d63a14d5f7f064aedd7f892c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.2E-18 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_20380 dcf752b5d63a14d5f7f064aedd7f892c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.2E-18 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_20380 dcf752b5d63a14d5f7f064aedd7f892c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.2E-18 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19875 c0d2e1546226e78b25e88432396dabe0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 4.9E-13 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19875 c0d2e1546226e78b25e88432396dabe0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 4.9E-13 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19875 c0d2e1546226e78b25e88432396dabe0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.9E-13 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19875 c0d2e1546226e78b25e88432396dabe0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 4.9E-13 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19875 c0d2e1546226e78b25e88432396dabe0 257 Pfam PF00106 short chain dehydrogenase 7 206 4.0E-36 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19875 c0d2e1546226e78b25e88432396dabe0 257 Gene3D G3DSA:3.40.50.720 1 256 1.6E-49 T 31-10-2018 DY252_19875 c0d2e1546226e78b25e88432396dabe0 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 7.3E-8 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19875 c0d2e1546226e78b25e88432396dabe0 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 7.3E-8 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19875 c0d2e1546226e78b25e88432396dabe0 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 7.3E-8 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19875 c0d2e1546226e78b25e88432396dabe0 257 SUPERFAMILY SSF51735 2 224 9.39E-45 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_19875 c0d2e1546226e78b25e88432396dabe0 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_13185 b77ffcaa670dbec87d17619138a4cf9e 445 SUPERFAMILY SSF51230 1 94 2.88E-29 T 31-10-2018 IPR011053 Single hybrid motif DY252_13185 b77ffcaa670dbec87d17619138a4cf9e 445 Pfam PF02817 e3 binding domain 141 176 4.0E-15 T 31-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DY252_13185 b77ffcaa670dbec87d17619138a4cf9e 445 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 4 445 5.3E-168 T 31-10-2018 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 DY252_13185 b77ffcaa670dbec87d17619138a4cf9e 445 SUPERFAMILY SSF52777 218 445 1.6E-84 T 31-10-2018 DY252_13185 b77ffcaa670dbec87d17619138a4cf9e 445 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 31-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DY252_13185 b77ffcaa670dbec87d17619138a4cf9e 445 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 219 445 1.3E-86 T 31-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DY252_13185 b77ffcaa670dbec87d17619138a4cf9e 445 SUPERFAMILY SSF47005 134 180 9.68E-12 T 31-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DY252_13185 b77ffcaa670dbec87d17619138a4cf9e 445 Gene3D G3DSA:3.30.559.10 202 442 1.3E-97 T 31-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DY252_13185 b77ffcaa670dbec87d17619138a4cf9e 445 Gene3D G3DSA:2.40.50.100 2 102 5.0E-33 T 31-10-2018 DY252_13185 b77ffcaa670dbec87d17619138a4cf9e 445 Pfam PF00364 Biotin-requiring enzyme 4 76 1.6E-20 T 31-10-2018 IPR000089 Biotin/lipoyl attachment DY252_13185 b77ffcaa670dbec87d17619138a4cf9e 445 Gene3D G3DSA:4.10.320.10 135 193 5.1E-18 T 31-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DY252_01380 ab67c5aeadd05c7670bd87a053ad3f80 304 Gene3D G3DSA:1.10.10.10 8 93 4.7E-20 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_01380 ab67c5aeadd05c7670bd87a053ad3f80 304 SUPERFAMILY SSF46785 9 117 3.77E-20 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_01380 ab67c5aeadd05c7670bd87a053ad3f80 304 SUPERFAMILY SSF53850 97 298 6.15E-37 T 31-10-2018 DY252_01380 ab67c5aeadd05c7670bd87a053ad3f80 304 Gene3D G3DSA:3.40.190.10 169 270 1.4E-48 T 31-10-2018 DY252_01380 ab67c5aeadd05c7670bd87a053ad3f80 304 Pfam PF03466 LysR substrate binding domain 97 298 6.3E-36 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_01380 ab67c5aeadd05c7670bd87a053ad3f80 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 1.2E-18 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_01380 ab67c5aeadd05c7670bd87a053ad3f80 304 Gene3D G3DSA:3.40.190.10 97 295 1.4E-48 T 31-10-2018 DY252_06315 61c42612c22a2a6fb47e1d2b0a2e17fc 297 Pfam PF02219 Methylenetetrahydrofolate reductase 11 288 3.9E-102 T 31-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 DY252_06315 61c42612c22a2a6fb47e1d2b0a2e17fc 297 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 16 287 1.5E-105 T 31-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 DY252_06315 61c42612c22a2a6fb47e1d2b0a2e17fc 297 Gene3D G3DSA:3.20.20.220 2 296 1.2E-106 T 31-10-2018 DY252_06315 61c42612c22a2a6fb47e1d2b0a2e17fc 297 SUPERFAMILY SSF51730 12 289 3.34E-100 T 31-10-2018 IPR029041 FAD-linked oxidoreductase-like DY252_03370 8f8abce9ca254dc3ccadfdb734b37307 305 Gene3D G3DSA:1.20.1420.30 33 298 4.6E-89 T 31-10-2018 DY252_03370 8f8abce9ca254dc3ccadfdb734b37307 305 Gene3D G3DSA:1.20.58.1130 7 197 4.6E-89 T 31-10-2018 DY252_03370 8f8abce9ca254dc3ccadfdb734b37307 305 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 4 298 9.5E-76 T 31-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 DY252_03370 8f8abce9ca254dc3ccadfdb734b37307 305 Pfam PF01699 Sodium/calcium exchanger protein 4 142 4.6E-21 T 31-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 DY252_03370 8f8abce9ca254dc3ccadfdb734b37307 305 Pfam PF01699 Sodium/calcium exchanger protein 165 302 2.8E-32 T 31-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 DY252_13630 6fd30d5bc146763f8f808bde59f3338f 302 Gene3D G3DSA:1.10.3720.10 57 296 2.2E-54 T 31-10-2018 IPR035906 MetI-like superfamily DY252_13630 6fd30d5bc146763f8f808bde59f3338f 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 295 4.2E-14 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_13630 6fd30d5bc146763f8f808bde59f3338f 302 SUPERFAMILY SSF161098 61 287 2.22E-47 T 31-10-2018 IPR035906 MetI-like superfamily DY252_05920 5842b3dfbc2c4570f21dbe8003605d8d 889 Gene3D G3DSA:1.20.1250.20 432 662 1.4E-77 T 31-10-2018 DY252_05920 5842b3dfbc2c4570f21dbe8003605d8d 889 Gene3D G3DSA:1.20.1250.20 2 189 6.0E-45 T 31-10-2018 DY252_05920 5842b3dfbc2c4570f21dbe8003605d8d 889 Gene3D G3DSA:1.20.1250.20 206 418 1.4E-51 T 31-10-2018 DY252_05920 5842b3dfbc2c4570f21dbe8003605d8d 889 TIGRFAM TIGR00886 2A0108: nitrite transporter 461 840 7.0E-95 T 31-10-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 DY252_05920 5842b3dfbc2c4570f21dbe8003605d8d 889 SUPERFAMILY SSF103473 460 883 1.14E-33 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_05920 5842b3dfbc2c4570f21dbe8003605d8d 889 Pfam PF07690 Major Facilitator Superfamily 22 326 6.6E-39 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_05920 5842b3dfbc2c4570f21dbe8003605d8d 889 Pfam PF07690 Major Facilitator Superfamily 493 807 1.8E-11 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_05920 5842b3dfbc2c4570f21dbe8003605d8d 889 Gene3D G3DSA:1.20.1250.20 663 886 1.6E-67 T 31-10-2018 DY252_05920 5842b3dfbc2c4570f21dbe8003605d8d 889 SUPERFAMILY SSF103473 10 419 2.49E-61 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_18545 51e5867c6fbfe60dc4f2a075ed042698 463 Gene3D G3DSA:3.40.50.150 105 452 2.2E-75 T 31-10-2018 DY252_18545 51e5867c6fbfe60dc4f2a075ed042698 463 SUPERFAMILY SSF50249 27 84 2.17E-5 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_18545 51e5867c6fbfe60dc4f2a075ed042698 463 Gene3D G3DSA:3.40.1350.30 154 292 2.2E-75 T 31-10-2018 DY252_18545 51e5867c6fbfe60dc4f2a075ed042698 463 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 391 421 - T 31-10-2018 IPR030390 RNA methyltransferase TrmA, active site DY252_18545 51e5867c6fbfe60dc4f2a075ed042698 463 SUPERFAMILY SSF53335 95 459 2.07E-54 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_18545 51e5867c6fbfe60dc4f2a075ed042698 463 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 317 459 2.9E-9 T 31-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 DY252_18545 51e5867c6fbfe60dc4f2a075ed042698 463 Gene3D G3DSA:2.40.50.140 14 104 1.4E-10 T 31-10-2018 DY252_15185 eb4d6fc9f7c6ef4b8f371add21678cce 367 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 7 363 8.6E-84 T 31-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 DY252_15185 eb4d6fc9f7c6ef4b8f371add21678cce 367 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 362 6.6E-63 T 31-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 DY252_17200 865470b17c605a77021eabf6f84859a7 280 SUPERFAMILY SSF46689 173 223 1.08E-10 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_17200 865470b17c605a77021eabf6f84859a7 280 SUPERFAMILY SSF46689 226 275 5.73E-9 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_17200 865470b17c605a77021eabf6f84859a7 280 Pfam PF12833 Helix-turn-helix domain 195 274 7.6E-20 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_17200 865470b17c605a77021eabf6f84859a7 280 Gene3D G3DSA:1.10.10.60 168 278 5.6E-26 T 31-10-2018 DY252_17200 865470b17c605a77021eabf6f84859a7 280 SMART SM00342 189 272 1.6E-25 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_13115 ef6686953b9d2770988e56edbd66c6c2 610 SUPERFAMILY SSF52540 208 458 1.06E-58 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_13115 ef6686953b9d2770988e56edbd66c6c2 610 Gene3D G3DSA:3.40.50.300 6 208 1.2E-80 T 31-10-2018 DY252_13115 ef6686953b9d2770988e56edbd66c6c2 610 Gene3D G3DSA:1.10.150.80 529 609 3.6E-24 T 31-10-2018 DY252_13115 ef6686953b9d2770988e56edbd66c6c2 610 Gene3D G3DSA:1.10.10.10 342 526 1.3E-49 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_13115 ef6686953b9d2770988e56edbd66c6c2 610 Pfam PF00270 DEAD/DEAH box helicase 30 187 2.6E-19 T 31-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DY252_13115 ef6686953b9d2770988e56edbd66c6c2 610 Pfam PF00570 HRDC domain 540 605 2.0E-22 T 31-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DY252_13115 ef6686953b9d2770988e56edbd66c6c2 610 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 15 606 1.2E-248 T 31-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 DY252_13115 ef6686953b9d2770988e56edbd66c6c2 610 Pfam PF00271 Helicase conserved C-terminal domain 225 331 7.3E-14 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_13115 ef6686953b9d2770988e56edbd66c6c2 610 SMART SM00341 536 609 1.1E-14 T 31-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DY252_13115 ef6686953b9d2770988e56edbd66c6c2 610 SMART SM00487 22 218 6.7E-29 T 31-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DY252_13115 ef6686953b9d2770988e56edbd66c6c2 610 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 465 1.6E-158 T 31-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 DY252_13115 ef6686953b9d2770988e56edbd66c6c2 610 Pfam PF16124 RecQ zinc-binding 344 406 4.3E-18 T 31-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain DY252_13115 ef6686953b9d2770988e56edbd66c6c2 610 Gene3D G3DSA:3.40.50.300 209 341 4.0E-39 T 31-10-2018 DY252_13115 ef6686953b9d2770988e56edbd66c6c2 610 Pfam PF09382 RQC domain 409 520 1.4E-40 T 31-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DY252_13115 ef6686953b9d2770988e56edbd66c6c2 610 SMART SM00956 413 516 2.0E-52 T 31-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DY252_13115 ef6686953b9d2770988e56edbd66c6c2 610 SUPERFAMILY SSF47819 537 607 1.96E-22 T 31-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 DY252_13115 ef6686953b9d2770988e56edbd66c6c2 610 SMART SM00490 251 332 7.2E-24 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_13115 ef6686953b9d2770988e56edbd66c6c2 610 SUPERFAMILY SSF52540 8 197 6.32E-44 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_05040 35a61b3b6ca67e233ed1a9e2377da440 345 SUPERFAMILY SSF82051 2 158 7.59E-56 T 31-10-2018 IPR036726 GTP1/OBG domain superfamily DY252_05040 35a61b3b6ca67e233ed1a9e2377da440 345 Hamap MF_01454 GTPase Obg [obg]. 2 327 46.668 T 31-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 DY252_05040 35a61b3b6ca67e233ed1a9e2377da440 345 SUPERFAMILY SSF52540 151 330 1.33E-48 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_05040 35a61b3b6ca67e233ed1a9e2377da440 345 Pfam PF01926 50S ribosome-binding GTPase 162 280 3.1E-26 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_05040 35a61b3b6ca67e233ed1a9e2377da440 345 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 4.4E-35 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_05040 35a61b3b6ca67e233ed1a9e2377da440 345 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 4.4E-35 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_05040 35a61b3b6ca67e233ed1a9e2377da440 345 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 4.4E-35 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_05040 35a61b3b6ca67e233ed1a9e2377da440 345 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 4.4E-35 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_05040 35a61b3b6ca67e233ed1a9e2377da440 345 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 31-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 DY252_05040 35a61b3b6ca67e233ed1a9e2377da440 345 PIRSF PIRSF002401 1 344 1.1E-132 T 31-10-2018 IPR035101 GTP-binding protein, Obg-type DY252_05040 35a61b3b6ca67e233ed1a9e2377da440 345 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 325 5.8E-139 T 31-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 DY252_05040 35a61b3b6ca67e233ed1a9e2377da440 345 Gene3D G3DSA:2.70.210.12 1 158 3.6E-58 T 31-10-2018 IPR036726 GTP1/OBG domain superfamily DY252_05040 35a61b3b6ca67e233ed1a9e2377da440 345 Gene3D G3DSA:3.40.50.300 160 342 1.7E-48 T 31-10-2018 DY252_05040 35a61b3b6ca67e233ed1a9e2377da440 345 Pfam PF01018 GTP1/OBG 5 158 1.1E-59 T 31-10-2018 IPR006169 GTP1/OBG domain DY252_02210 90ae59faaa67ab2810cfd856f08d9dac 532 SUPERFAMILY SSF56235 9 532 6.17E-160 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_02210 90ae59faaa67ab2810cfd856f08d9dac 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 404 419 2.0E-32 T 31-10-2018 DY252_02210 90ae59faaa67ab2810cfd856f08d9dac 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 254 273 2.0E-32 T 31-10-2018 DY252_02210 90ae59faaa67ab2810cfd856f08d9dac 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 127 146 2.0E-32 T 31-10-2018 DY252_02210 90ae59faaa67ab2810cfd856f08d9dac 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 429 446 2.0E-32 T 31-10-2018 DY252_02210 90ae59faaa67ab2810cfd856f08d9dac 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 349 367 2.0E-32 T 31-10-2018 DY252_02210 90ae59faaa67ab2810cfd856f08d9dac 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 42 67 2.0E-32 T 31-10-2018 DY252_02210 90ae59faaa67ab2810cfd856f08d9dac 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 373 391 2.0E-32 T 31-10-2018 DY252_02210 90ae59faaa67ab2810cfd856f08d9dac 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 109 127 2.0E-32 T 31-10-2018 DY252_02210 90ae59faaa67ab2810cfd856f08d9dac 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 225 241 2.0E-32 T 31-10-2018 DY252_02210 90ae59faaa67ab2810cfd856f08d9dac 532 Gene3D G3DSA:1.10.246.130 242 349 7.7E-25 T 31-10-2018 DY252_02210 90ae59faaa67ab2810cfd856f08d9dac 532 Gene3D G3DSA:3.60.20.40 350 532 6.6E-62 T 31-10-2018 DY252_02210 90ae59faaa67ab2810cfd856f08d9dac 532 Pfam PF01019 Gamma-glutamyltranspeptidase 35 527 4.9E-143 T 31-10-2018 DY252_12110 be5456829084d1c7be802de75b0b217c 259 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 31-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 DY252_12110 be5456829084d1c7be802de75b0b217c 259 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 256 4.2E-78 T 31-10-2018 DY252_12110 be5456829084d1c7be802de75b0b217c 259 Gene3D G3DSA:3.60.10.10 1 258 1.5E-76 T 31-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DY252_12110 be5456829084d1c7be802de75b0b217c 259 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 250 1.1E-23 T 31-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DY252_12110 be5456829084d1c7be802de75b0b217c 259 SUPERFAMILY SSF56219 1 258 2.36E-82 T 31-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DY252_12110 be5456829084d1c7be802de75b0b217c 259 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 257 2.8E-74 T 31-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 DY252_11930 d728ca99fd5debe13efc406d4021594d 155 SMART SM00028 109 142 440.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_11930 d728ca99fd5debe13efc406d4021594d 155 SMART SM00028 75 108 3.5E-6 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_11930 d728ca99fd5debe13efc406d4021594d 155 SUPERFAMILY SSF48452 51 146 1.29E-18 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_11930 d728ca99fd5debe13efc406d4021594d 155 Gene3D G3DSA:1.25.40.10 40 155 8.0E-21 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_11930 d728ca99fd5debe13efc406d4021594d 155 Pfam PF00515 Tetratricopeptide repeat 75 108 6.7E-8 T 31-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 DY252_01300 99e6d09b7dacc7f14cb45c77f6275201 253 Pfam PF00977 Histidine biosynthesis protein 5 234 2.4E-90 T 31-10-2018 IPR006062 Histidine biosynthesis GO:0000105 DY252_01300 99e6d09b7dacc7f14cb45c77f6275201 253 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 1.1E-105 T 31-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 DY252_01300 99e6d09b7dacc7f14cb45c77f6275201 253 SUPERFAMILY SSF51366 1 251 1.1E-84 T 31-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DY252_01300 99e6d09b7dacc7f14cb45c77f6275201 253 Gene3D G3DSA:3.20.20.70 1 253 3.9E-110 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_01300 99e6d09b7dacc7f14cb45c77f6275201 253 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 46.409 T 31-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 DY252_00625 58d252d8cea5e647c1343f04f8faf137 240 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 62 75 - T 31-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DY252_00625 58d252d8cea5e647c1343f04f8faf137 240 SMART SM00934 10 235 3.5E-86 T 31-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DY252_00625 58d252d8cea5e647c1343f04f8faf137 240 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 8 240 35.748 T 31-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DY252_00625 58d252d8cea5e647c1343f04f8faf137 240 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 11 235 1.0E-40 T 31-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DY252_00625 58d252d8cea5e647c1343f04f8faf137 240 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 13 235 2.2E-52 T 31-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DY252_00625 58d252d8cea5e647c1343f04f8faf137 240 SUPERFAMILY SSF51366 8 238 9.13E-70 T 31-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DY252_00625 58d252d8cea5e647c1343f04f8faf137 240 Gene3D G3DSA:3.20.20.70 4 240 1.3E-82 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 Gene3D G3DSA:3.30.565.10 12 222 7.5E-70 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 SUPERFAMILY SSF55874 16 217 4.19E-55 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 SMART SM00433 45 653 8.0E-275 T 31-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 Pfam PF00204 DNA gyrase B 241 410 1.3E-44 T 31-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 ProSitePatterns PS00177 DNA topoisomerase II signature. 441 449 - T 31-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 PRINTS PR01159 DNA gyrase subunit B signature 332 348 2.3E-14 T 31-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 PRINTS PR01159 DNA gyrase subunit B signature 489 498 2.3E-14 T 31-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 PRINTS PR01159 DNA gyrase subunit B signature 240 262 2.3E-14 T 31-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 PRINTS PR01159 DNA gyrase subunit B signature 607 619 2.3E-14 T 31-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 PRINTS PR01159 DNA gyrase subunit B signature 380 394 2.3E-14 T 31-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 PRINTS PR01159 DNA gyrase subunit B signature 394 414 2.3E-14 T 31-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 PRINTS PR01159 DNA gyrase subunit B signature 16 26 2.3E-14 T 31-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 Gene3D G3DSA:3.40.50.670 418 660 7.3E-90 T 31-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 SUPERFAMILY SSF54211 241 410 1.06E-43 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 42 186 6.8E-19 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 13 657 42.098 T 31-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 Pfam PF01751 Toprim domain 438 544 9.1E-18 T 31-10-2018 IPR006171 TOPRIM domain DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 582 649 1.8E-23 T 31-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 PRINTS PR00418 DNA topoisomerase II family signature 124 138 5.3E-62 T 31-10-2018 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 PRINTS PR00418 DNA topoisomerase II family signature 439 453 5.3E-62 T 31-10-2018 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 PRINTS PR00418 DNA topoisomerase II family signature 586 602 5.3E-62 T 31-10-2018 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 PRINTS PR00418 DNA topoisomerase II family signature 505 521 5.3E-62 T 31-10-2018 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 PRINTS PR00418 DNA topoisomerase II family signature 80 93 5.3E-62 T 31-10-2018 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 PRINTS PR00418 DNA topoisomerase II family signature 290 303 5.3E-62 T 31-10-2018 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 PRINTS PR00418 DNA topoisomerase II family signature 45 60 5.3E-62 T 31-10-2018 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 PRINTS PR00418 DNA topoisomerase II family signature 523 540 5.3E-62 T 31-10-2018 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 PRINTS PR00418 DNA topoisomerase II family signature 543 555 5.3E-62 T 31-10-2018 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 14 651 4.0E-232 T 31-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 Gene3D G3DSA:3.30.230.10 241 414 5.9E-50 T 31-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 SUPERFAMILY SSF56719 413 652 6.02E-77 T 31-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DY252_10650 e9cf795e5f1ba0eedd137bf838d586ac 660 SMART SM00387 41 187 5.2E-24 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_08155 aeb144fa404367ea2defdfe3d783af02 602 SMART SM00490 259 340 6.1E-34 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_08155 aeb144fa404367ea2defdfe3d783af02 602 SUPERFAMILY SSF52540 76 361 6.35E-73 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_08155 aeb144fa404367ea2defdfe3d783af02 602 Gene3D G3DSA:3.40.50.300 1 211 5.7E-76 T 31-10-2018 DY252_08155 aeb144fa404367ea2defdfe3d783af02 602 Pfam PF00270 DEAD/DEAH box helicase 26 194 5.3E-48 T 31-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DY252_08155 aeb144fa404367ea2defdfe3d783af02 602 Gene3D G3DSA:3.40.50.300 214 399 1.2E-52 T 31-10-2018 DY252_08155 aeb144fa404367ea2defdfe3d783af02 602 SMART SM00487 21 223 4.9E-59 T 31-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DY252_08155 aeb144fa404367ea2defdfe3d783af02 602 Pfam PF00271 Helicase conserved C-terminal domain 234 340 8.7E-30 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_20135 97a9eea86efd52f0c238b33ff0afc47c 109 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 15 103 5.2E-14 T 31-10-2018 IPR008407 Branched-chain amino acid transport, AzlD DY252_04260 d0cc029e86c1abc2e43bc777d8698f73 123 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 121 38.111 T 31-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 DY252_04260 d0cc029e86c1abc2e43bc777d8698f73 123 Gene3D G3DSA:2.40.50.100 1 123 2.4E-50 T 31-10-2018 DY252_04260 d0cc029e86c1abc2e43bc777d8698f73 123 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 43 72 - T 31-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DY252_04260 d0cc029e86c1abc2e43bc777d8698f73 123 Pfam PF01597 Glycine cleavage H-protein 4 121 4.5E-45 T 31-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate DY252_04260 d0cc029e86c1abc2e43bc777d8698f73 123 SUPERFAMILY SSF51230 4 122 4.84E-43 T 31-10-2018 IPR011053 Single hybrid motif DY252_04260 d0cc029e86c1abc2e43bc777d8698f73 123 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 120 5.2E-46 T 31-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 DY252_09170 5e27105c77d66185c259546e5c3a729e 340 Gene3D G3DSA:3.40.190.10 113 218 3.3E-65 T 31-10-2018 DY252_09170 5e27105c77d66185c259546e5c3a729e 340 SUPERFAMILY SSF53850 34 264 3.88E-34 T 31-10-2018 DY252_09170 5e27105c77d66185c259546e5c3a729e 340 Gene3D G3DSA:3.40.190.10 32 308 3.3E-65 T 31-10-2018 DY252_09170 5e27105c77d66185c259546e5c3a729e 340 Pfam PF09084 NMT1/THI5 like 43 257 2.4E-43 T 31-10-2018 IPR015168 SsuA/THI5-like DY252_06240 b87e8c072c4dab694f9fb1bd975e9044 183 Gene3D G3DSA:3.30.1360.120 19 180 2.3E-35 T 31-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DY252_06240 b87e8c072c4dab694f9fb1bd975e9044 183 SUPERFAMILY SSF103025 66 180 1.47E-11 T 31-10-2018 DY252_06240 b87e8c072c4dab694f9fb1bd975e9044 183 Pfam PF04268 Sarcosine oxidase, gamma subunit family 39 179 1.2E-25 T 31-10-2018 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DY252_06240 b87e8c072c4dab694f9fb1bd975e9044 183 TIGRFAM TIGR01375 soxG: sarcosine oxidase, gamma subunit family 38 179 2.4E-44 T 31-10-2018 IPR006280 Sarcosine oxidase, gamma subunit, heterotetrameric KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DY252_06240 b87e8c072c4dab694f9fb1bd975e9044 183 Gene3D G3DSA:3.30.70.1520 26 104 2.3E-35 T 31-10-2018 DY252_08780 e6e4b76185280d390cb998c821a53175 375 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 370 2.4E-62 T 31-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 DY252_08780 e6e4b76185280d390cb998c821a53175 375 Gene3D G3DSA:3.40.50.1980 261 373 1.2E-41 T 31-10-2018 DY252_08780 e6e4b76185280d390cb998c821a53175 375 Gene3D G3DSA:3.40.50.1980 34 260 1.8E-33 T 31-10-2018 DY252_08780 e6e4b76185280d390cb998c821a53175 375 SUPERFAMILY SSF53807 26 372 1.02E-70 T 31-10-2018 DY252_02795 507828ef74963b0e20d71e519cbad31f 61 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 52 4.2E-9 T 31-10-2018 IPR010260 DNA-binding transcriptional activator AlpA DY252_02795 507828ef74963b0e20d71e519cbad31f 61 SUPERFAMILY SSF46955 6 53 7.87E-7 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_16135 4c4a0a06a5bbf5e860f53ba46f376629 257 SMART SM00062 26 252 6.6E-4 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_16135 4c4a0a06a5bbf5e860f53ba46f376629 257 SUPERFAMILY SSF53850 27 249 2.33E-38 T 31-10-2018 DY252_16135 4c4a0a06a5bbf5e860f53ba46f376629 257 Gene3D G3DSA:3.40.190.10 29 244 6.8E-30 T 31-10-2018 DY252_16135 4c4a0a06a5bbf5e860f53ba46f376629 257 Gene3D G3DSA:3.40.190.10 112 208 6.8E-30 T 31-10-2018 DY252_16135 4c4a0a06a5bbf5e860f53ba46f376629 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 248 7.0E-21 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_16245 47f961b2c01aa6c1e0cdab267cd3f43d 524 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 311 372 6.3E-7 T 31-10-2018 IPR018660 C-type lysozyme inhibitor DY252_16245 47f961b2c01aa6c1e0cdab267cd3f43d 524 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 32 135 3.1E-26 T 31-10-2018 IPR039366 YscW/ExsB DY252_16245 47f961b2c01aa6c1e0cdab267cd3f43d 524 Gene3D G3DSA:2.40.128.200 308 379 3.5E-7 T 31-10-2018 IPR036328 C-type lysozyme inhibitor superfamily DY252_16245 47f961b2c01aa6c1e0cdab267cd3f43d 524 SUPERFAMILY SSF141488 306 376 5.62E-7 T 31-10-2018 IPR036328 C-type lysozyme inhibitor superfamily DY252_02070 b7f4697a2de8a47077fd9567cc504e4a 215 SUPERFAMILY SSF53167 23 199 1.38E-28 T 31-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DY252_02070 b7f4697a2de8a47077fd9567cc504e4a 215 Pfam PF01048 Phosphorylase superfamily 137 173 3.3E-6 T 31-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DY252_02070 b7f4697a2de8a47077fd9567cc504e4a 215 TIGRFAM TIGR01705 MTA/SAH-nuc-hyp: putative 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 5 212 1.6E-101 T 31-10-2018 IPR010050 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative DY252_02070 b7f4697a2de8a47077fd9567cc504e4a 215 Gene3D G3DSA:3.40.50.1580 4 211 1.1E-47 T 31-10-2018 DY252_14440 0d027d9de55f17e4b3a08a89ca2af9ad 175 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 11 66 7.3E-17 T 31-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DY252_14440 0d027d9de55f17e4b3a08a89ca2af9ad 175 Gene3D G3DSA:3.40.50.620 6 175 1.1E-51 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_14440 0d027d9de55f17e4b3a08a89ca2af9ad 175 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 12 169 3.7E-55 T 31-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DY252_14440 0d027d9de55f17e4b3a08a89ca2af9ad 175 SUPERFAMILY SSF52374 10 169 7.51E-38 T 31-10-2018 DY252_14440 0d027d9de55f17e4b3a08a89ca2af9ad 175 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 10 171 33.577 T 31-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DY252_14440 0d027d9de55f17e4b3a08a89ca2af9ad 175 Pfam PF01467 Cytidylyltransferase-like 13 144 2.1E-15 T 31-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DY252_14440 0d027d9de55f17e4b3a08a89ca2af9ad 175 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 10 28 2.4E-34 T 31-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DY252_14440 0d027d9de55f17e4b3a08a89ca2af9ad 175 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 98 114 2.4E-34 T 31-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DY252_14440 0d027d9de55f17e4b3a08a89ca2af9ad 175 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 125 147 2.4E-34 T 31-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DY252_14440 0d027d9de55f17e4b3a08a89ca2af9ad 175 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 28 49 2.4E-34 T 31-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DY252_04150 f3a988c90068302ef7024d5f0a0f23c7 190 Gene3D G3DSA:1.20.1200.10 16 188 1.4E-58 T 31-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DY252_04150 f3a988c90068302ef7024d5f0a0f23c7 190 SUPERFAMILY SSF89028 6 185 2.16E-61 T 31-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DY252_04150 f3a988c90068302ef7024d5f0a0f23c7 190 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 8 185 2.1E-60 T 31-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DY252_04150 f3a988c90068302ef7024d5f0a0f23c7 190 Pfam PF01923 Cobalamin adenosyltransferase 7 173 1.3E-61 T 31-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DY252_04150 f3a988c90068302ef7024d5f0a0f23c7 190 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 13 184 1.0E-61 T 31-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DY252_02420 9ada4ba2f9c7bd8f46922998fe62063b 525 Pfam PF01808 AICARFT/IMPCHase bienzyme 136 449 3.2E-121 T 31-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DY252_02420 9ada4ba2f9c7bd8f46922998fe62063b 525 Pfam PF02142 MGS-like domain 17 130 4.6E-27 T 31-10-2018 IPR011607 Methylglyoxal synthase-like domain DY252_02420 9ada4ba2f9c7bd8f46922998fe62063b 525 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 5 525 44.781 T 31-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DY252_02420 9ada4ba2f9c7bd8f46922998fe62063b 525 SMART SM00851 17 131 4.9E-57 T 31-10-2018 IPR011607 Methylglyoxal synthase-like domain DY252_02420 9ada4ba2f9c7bd8f46922998fe62063b 525 SUPERFAMILY SSF53927 212 525 2.31E-128 T 31-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DY252_02420 9ada4ba2f9c7bd8f46922998fe62063b 525 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 7 525 1.4E-209 T 31-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DY252_02420 9ada4ba2f9c7bd8f46922998fe62063b 525 Gene3D G3DSA:3.40.140.20 206 359 9.4E-59 T 31-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DY252_02420 9ada4ba2f9c7bd8f46922998fe62063b 525 Gene3D G3DSA:3.40.140.20 381 525 2.6E-56 T 31-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DY252_02420 9ada4ba2f9c7bd8f46922998fe62063b 525 SMART SM00798 136 450 4.7E-201 T 31-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DY252_02420 9ada4ba2f9c7bd8f46922998fe62063b 525 PIRSF PIRSF000414 1 525 1.2E-218 T 31-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DY252_02420 9ada4ba2f9c7bd8f46922998fe62063b 525 Gene3D G3DSA:3.40.50.1380 1 199 1.1E-87 T 31-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DY252_02420 9ada4ba2f9c7bd8f46922998fe62063b 525 SUPERFAMILY SSF52335 5 196 4.35E-68 T 31-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DY252_18470 d010fda199a35bcbd333e9a62ba1d505 195 SUPERFAMILY SSF52218 6 182 4.19E-36 T 31-10-2018 IPR029039 Flavoprotein-like superfamily DY252_18470 d010fda199a35bcbd333e9a62ba1d505 195 Gene3D G3DSA:3.40.50.360 2 193 5.7E-52 T 31-10-2018 IPR029039 Flavoprotein-like superfamily DY252_18470 d010fda199a35bcbd333e9a62ba1d505 195 Pfam PF03358 NADPH-dependent FMN reductase 6 145 4.6E-36 T 31-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DY252_13315 38903d902cc5292276a1f3ca0a0cc483 267 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 10 38 - T 31-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DY252_13315 38903d902cc5292276a1f3ca0a0cc483 267 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 259 44.925 T 31-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 DY252_13315 38903d902cc5292276a1f3ca0a0cc483 267 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 258 1.4E-107 T 31-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 DY252_13315 38903d902cc5292276a1f3ca0a0cc483 267 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 48 8.3E-10 T 31-10-2018 IPR001451 Hexapeptide repeat DY252_13315 38903d902cc5292276a1f3ca0a0cc483 267 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 137 4.0E-8 T 31-10-2018 IPR001451 Hexapeptide repeat DY252_13315 38903d902cc5292276a1f3ca0a0cc483 267 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 258 1.6E-23 T 31-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 DY252_13315 38903d902cc5292276a1f3ca0a0cc483 267 SUPERFAMILY SSF51161 3 251 2.55E-72 T 31-10-2018 IPR011004 Trimeric LpxA-like superfamily DY252_13315 38903d902cc5292276a1f3ca0a0cc483 267 Gene3D G3DSA:2.160.10.10 1 192 3.8E-49 T 31-10-2018 DY252_13315 38903d902cc5292276a1f3ca0a0cc483 267 PIRSF PIRSF000456 1 266 2.0E-106 T 31-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 DY252_13315 38903d902cc5292276a1f3ca0a0cc483 267 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 149 177 - T 31-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DY252_13315 38903d902cc5292276a1f3ca0a0cc483 267 Gene3D G3DSA:1.20.1180.10 194 266 3.0E-16 T 31-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 DY252_01270 80ff33bd4f4340a20b7779dcbaf90f38 711 Gene3D G3DSA:1.20.1480.50 339 421 2.2E-5 T 31-10-2018 DY252_01270 80ff33bd4f4340a20b7779dcbaf90f38 711 Gene3D G3DSA:3.30.450.20 229 271 2.6E-21 T 31-10-2018 DY252_01270 80ff33bd4f4340a20b7779dcbaf90f38 711 Gene3D G3DSA:3.30.450.20 149 228 2.6E-21 T 31-10-2018 DY252_01270 80ff33bd4f4340a20b7779dcbaf90f38 711 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 444 612 8.9E-25 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_01270 80ff33bd4f4340a20b7779dcbaf90f38 711 SMART SM00044 410 609 5.3E-8 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_01270 80ff33bd4f4340a20b7779dcbaf90f38 711 SUPERFAMILY SSF55073 440 630 2.04E-49 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_01270 80ff33bd4f4340a20b7779dcbaf90f38 711 Gene3D G3DSA:3.30.70.1230 435 641 1.0E-54 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_01270 80ff33bd4f4340a20b7779dcbaf90f38 711 SUPERFAMILY SSF103190 167 237 1.73E-6 T 31-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DY252_01270 80ff33bd4f4340a20b7779dcbaf90f38 711 Pfam PF02743 Cache domain 153 319 3.0E-18 T 31-10-2018 IPR033479 Double Cache domain 1 DY252_04420 0d4053b0bdd03c2bbd0496bd3272b712 513 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 268 275 - T 31-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DY252_04420 0d4053b0bdd03c2bbd0496bd3272b712 513 Pfam PF00171 Aldehyde dehydrogenase family 40 496 7.3E-164 T 31-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DY252_04420 0d4053b0bdd03c2bbd0496bd3272b712 513 SUPERFAMILY SSF53720 26 498 2.62E-154 T 31-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DY252_04420 0d4053b0bdd03c2bbd0496bd3272b712 513 Gene3D G3DSA:3.40.605.10 40 496 7.3E-165 T 31-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_04420 0d4053b0bdd03c2bbd0496bd3272b712 513 Gene3D G3DSA:3.40.309.10 275 468 7.3E-165 T 31-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DY252_07300 c6b6b5af3e503356d9ed4c30d25c803c 256 Pfam PF03473 MOSC domain 139 251 1.6E-14 T 31-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 DY252_07300 c6b6b5af3e503356d9ed4c30d25c803c 256 Gene3D G3DSA:2.40.33.20 129 256 3.2E-8 T 31-10-2018 DY252_07300 c6b6b5af3e503356d9ed4c30d25c803c 256 SUPERFAMILY SSF50800 1 253 4.71E-20 T 31-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily DY252_07300 c6b6b5af3e503356d9ed4c30d25c803c 256 Pfam PF03476 MOSC N-terminal beta barrel domain 4 98 2.8E-10 T 31-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 DY252_03675 bde92db6474802feee8ddc7a49fb4941 717 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 372 397 - T 31-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DY252_03675 bde92db6474802feee8ddc7a49fb4941 717 Gene3D G3DSA:3.20.20.240 29 545 9.4E-245 T 31-10-2018 DY252_03675 bde92db6474802feee8ddc7a49fb4941 717 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 583 712 3.7E-62 T 31-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DY252_03675 bde92db6474802feee8ddc7a49fb4941 717 Pfam PF02310 B12 binding domain 586 700 3.8E-12 T 31-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DY252_03675 bde92db6474802feee8ddc7a49fb4941 717 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 29 549 1.9E-279 T 31-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DY252_03675 bde92db6474802feee8ddc7a49fb4941 717 Gene3D G3DSA:3.40.50.280 549 713 1.2E-53 T 31-10-2018 DY252_03675 bde92db6474802feee8ddc7a49fb4941 717 Pfam PF01642 Methylmalonyl-CoA mutase 30 543 1.3E-239 T 31-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DY252_03675 bde92db6474802feee8ddc7a49fb4941 717 SUPERFAMILY SSF52242 549 711 9.94E-57 T 31-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 DY252_03675 bde92db6474802feee8ddc7a49fb4941 717 SUPERFAMILY SSF51703 21 545 6.02E-224 T 31-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DY252_10590 0d7baeee2451cd04ec461622991c2c69 192 SMART SM00867 30 190 1.4E-48 T 31-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DY252_10590 0d7baeee2451cd04ec461622991c2c69 192 Gene3D G3DSA:2.40.128.110 29 191 1.4E-42 T 31-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DY252_10590 0d7baeee2451cd04ec461622991c2c69 192 Pfam PF04264 YceI-like domain 31 189 5.0E-36 T 31-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DY252_10590 0d7baeee2451cd04ec461622991c2c69 192 SUPERFAMILY SSF101874 30 191 1.83E-45 T 31-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DY252_02875 ae649ec12d04183bd8a53e205b758ff0 544 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 507 537 3.7E-5 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_02875 ae649ec12d04183bd8a53e205b758ff0 544 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 269 1.2E-5 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_02875 ae649ec12d04183bd8a53e205b758ff0 544 SUPERFAMILY SSF52540 277 527 3.97E-69 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_02875 ae649ec12d04183bd8a53e205b758ff0 544 SMART SM00382 35 243 2.7E-15 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_02875 ae649ec12d04183bd8a53e205b758ff0 544 SMART SM00382 313 505 1.7E-18 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_02875 ae649ec12d04183bd8a53e205b758ff0 544 Pfam PF00005 ABC transporter 305 456 1.5E-32 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_02875 ae649ec12d04183bd8a53e205b758ff0 544 SUPERFAMILY SSF52540 10 257 6.46E-67 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_02875 ae649ec12d04183bd8a53e205b758ff0 544 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_02875 ae649ec12d04183bd8a53e205b758ff0 544 Gene3D G3DSA:3.40.50.300 8 274 1.2E-81 T 31-10-2018 DY252_02875 ae649ec12d04183bd8a53e205b758ff0 544 Gene3D G3DSA:3.40.50.300 275 543 4.8E-88 T 31-10-2018 DY252_02875 ae649ec12d04183bd8a53e205b758ff0 544 Pfam PF00005 ABC transporter 26 185 2.8E-28 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_02875 ae649ec12d04183bd8a53e205b758ff0 544 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_20565 c9a23d7a3fddf33b354a58a1500d4f24 179 Gene3D G3DSA:3.30.63.10 33 88 1.0E-18 T 31-10-2018 DY252_20565 c9a23d7a3fddf33b354a58a1500d4f24 179 SMART SM00072 1 177 1.3E-5 T 31-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DY252_20565 c9a23d7a3fddf33b354a58a1500d4f24 179 SUPERFAMILY SSF52540 1 176 1.9E-27 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_20565 c9a23d7a3fddf33b354a58a1500d4f24 179 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 1 177 5.6E-55 T 31-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DY252_20565 c9a23d7a3fddf33b354a58a1500d4f24 179 Gene3D G3DSA:3.40.50.300 3 171 1.0E-18 T 31-10-2018 DY252_20565 c9a23d7a3fddf33b354a58a1500d4f24 179 Pfam PF00625 Guanylate kinase 2 172 2.2E-6 T 31-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DY252_20565 c9a23d7a3fddf33b354a58a1500d4f24 179 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 1 177 29.907 T 31-10-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DY252_14490 f752ed53fab2b94c95108657ad4b8f5a 328 Pfam PF00144 Beta-lactamase 43 302 1.1E-22 T 31-10-2018 IPR001466 Beta-lactamase-related DY252_14490 f752ed53fab2b94c95108657ad4b8f5a 328 Gene3D G3DSA:3.40.710.10 15 310 9.5E-54 T 31-10-2018 DY252_14490 f752ed53fab2b94c95108657ad4b8f5a 328 SUPERFAMILY SSF56601 16 308 4.64E-61 T 31-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DY252_18025 58dd9dcc26386e84a7105a04a17071b3 351 Pfam PF02628 Cytochrome oxidase assembly protein 24 340 4.9E-106 T 31-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 DY252_18025 58dd9dcc26386e84a7105a04a17071b3 351 Hamap MF_01665 Heme A synthase [ctaA]. 20 350 24.154 T 31-10-2018 IPR023754 Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016627|GO:0055114 Reactome: R-HSA-189451 DY252_19210 a7ff18120dbf3b35f1c24545d40f6fa0 342 SUPERFAMILY SSF46689 16 129 1.18E-13 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_19210 a7ff18120dbf3b35f1c24545d40f6fa0 342 Pfam PF13358 DDE superfamily endonuclease 168 311 7.6E-38 T 31-10-2018 IPR038717 Tc1-like transposase, DDE domain DY252_19210 a7ff18120dbf3b35f1c24545d40f6fa0 342 Gene3D G3DSA:3.30.420.470 133 332 4.4E-17 T 31-10-2018 DY252_19210 a7ff18120dbf3b35f1c24545d40f6fa0 342 Pfam PF13518 Helix-turn-helix domain 18 70 1.5E-10 T 31-10-2018 DY252_19210 a7ff18120dbf3b35f1c24545d40f6fa0 342 Pfam PF13592 Winged helix-turn helix 95 154 9.0E-22 T 31-10-2018 IPR025959 Winged helix-turn helix domain DY252_06215 a7ff18120dbf3b35f1c24545d40f6fa0 342 SUPERFAMILY SSF46689 16 129 1.18E-13 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_06215 a7ff18120dbf3b35f1c24545d40f6fa0 342 Pfam PF13358 DDE superfamily endonuclease 168 311 7.6E-38 T 31-10-2018 IPR038717 Tc1-like transposase, DDE domain DY252_06215 a7ff18120dbf3b35f1c24545d40f6fa0 342 Gene3D G3DSA:3.30.420.470 133 332 4.4E-17 T 31-10-2018 DY252_06215 a7ff18120dbf3b35f1c24545d40f6fa0 342 Pfam PF13518 Helix-turn-helix domain 18 70 1.5E-10 T 31-10-2018 DY252_06215 a7ff18120dbf3b35f1c24545d40f6fa0 342 Pfam PF13592 Winged helix-turn helix 95 154 9.0E-22 T 31-10-2018 IPR025959 Winged helix-turn helix domain DY252_21820 d5ea55d179c76feba00211de8c6e402e 318 SUPERFAMILY SSF51735 102 288 6.81E-58 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_21820 d5ea55d179c76feba00211de8c6e402e 318 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 198 220 - T 31-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DY252_21820 d5ea55d179c76feba00211de8c6e402e 318 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 150 177 - T 31-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DY252_21820 d5ea55d179c76feba00211de8c6e402e 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 287 3.2E-57 T 31-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DY252_21820 d5ea55d179c76feba00211de8c6e402e 318 SUPERFAMILY SSF52283 2 136 3.4E-32 T 31-10-2018 DY252_21820 d5ea55d179c76feba00211de8c6e402e 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 317 2.9E-30 T 31-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DY252_21820 d5ea55d179c76feba00211de8c6e402e 318 Gene3D G3DSA:3.40.50.720 102 288 6.1E-110 T 31-10-2018 DY252_21820 d5ea55d179c76feba00211de8c6e402e 318 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 227 243 - T 31-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DY252_21820 d5ea55d179c76feba00211de8c6e402e 318 Gene3D G3DSA:3.40.50.720 8 296 6.1E-110 T 31-10-2018 DY252_11555 3b5e35522fc5e39a248f1f799105f6b2 404 Gene3D G3DSA:1.20.1250.20 208 399 4.0E-35 T 31-10-2018 DY252_11555 3b5e35522fc5e39a248f1f799105f6b2 404 Gene3D G3DSA:1.20.1250.20 20 202 1.7E-27 T 31-10-2018 DY252_11555 3b5e35522fc5e39a248f1f799105f6b2 404 PIRSF PIRSF004925 16 402 5.5E-112 T 31-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter DY252_11555 3b5e35522fc5e39a248f1f799105f6b2 404 SUPERFAMILY SSF103473 18 397 6.02E-50 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_11555 3b5e35522fc5e39a248f1f799105f6b2 404 Pfam PF12832 MFS_1 like family 34 376 1.6E-53 T 31-10-2018 IPR024989 Major facilitator superfamily associated domain DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 Gene3D G3DSA:3.40.50.880 533 723 1.2E-50 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 SUPERFAMILY SSF52317 530 723 1.83E-46 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 SUPERFAMILY SSF56322 27 514 6.41E-117 T 31-10-2018 IPR005801 ADC synthase GO:0009058 DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 PIRSF PIRSF036934 8 734 0.0 T 31-10-2018 IPR010112 Anthranilate synthase GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 PRINTS PR00096 Glutamine amidotransferase superfamily signature 606 617 2.6E-10 T 31-10-2018 DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 PRINTS PR00096 Glutamine amidotransferase superfamily signature 579 588 2.6E-10 T 31-10-2018 DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 PRINTS PR00096 Glutamine amidotransferase superfamily signature 697 710 2.6E-10 T 31-10-2018 DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 Pfam PF00425 chorismate binding enzyme 253 506 1.6E-66 T 31-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 PRINTS PR00097 Anthranilate synthase component II signature 631 639 4.2E-24 T 31-10-2018 DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 PRINTS PR00097 Anthranilate synthase component II signature 535 549 4.2E-24 T 31-10-2018 DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 PRINTS PR00097 Anthranilate synthase component II signature 606 617 4.2E-24 T 31-10-2018 DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 PRINTS PR00097 Anthranilate synthase component II signature 579 588 4.2E-24 T 31-10-2018 DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 PRINTS PR00097 Anthranilate synthase component II signature 697 710 4.2E-24 T 31-10-2018 DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 PRINTS PR00097 Anthranilate synthase component II signature 652 664 4.2E-24 T 31-10-2018 DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 Gene3D G3DSA:3.60.120.10 25 522 1.1E-119 T 31-10-2018 IPR005801 ADC synthase GO:0009058 DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 Pfam PF04715 Anthranilate synthase component I, N terminal region 52 209 3.0E-7 T 31-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 535 722 1.5E-39 T 31-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 TIGRFAM TIGR01815 TrpE-clade3: anthranilate synthase 19 722 0.0 T 31-10-2018 IPR010112 Anthranilate synthase GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DY252_21645 5ab8aa6909997042f3b193cd3ef34b1f 752 Pfam PF00117 Glutamine amidotransferase class-I 536 711 4.1E-37 T 31-10-2018 IPR017926 Glutamine amidotransferase DY252_00195 bdc2848e23d600f5f2e3be6b4f66a1c1 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 80 1.0E-16 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_00195 bdc2848e23d600f5f2e3be6b4f66a1c1 234 SMART SM00895 90 215 9.6E-17 T 31-10-2018 IPR011711 GntR, C-terminal DY252_00195 bdc2848e23d600f5f2e3be6b4f66a1c1 234 Gene3D G3DSA:1.20.120.530 84 229 1.8E-24 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_00195 bdc2848e23d600f5f2e3be6b4f66a1c1 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 7.1E-5 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_00195 bdc2848e23d600f5f2e3be6b4f66a1c1 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 7.1E-5 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_00195 bdc2848e23d600f5f2e3be6b4f66a1c1 234 SUPERFAMILY SSF46785 13 84 1.36E-20 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_00195 bdc2848e23d600f5f2e3be6b4f66a1c1 234 Pfam PF07729 FCD domain 90 214 5.1E-21 T 31-10-2018 IPR011711 GntR, C-terminal DY252_00195 bdc2848e23d600f5f2e3be6b4f66a1c1 234 SUPERFAMILY SSF48008 87 222 1.39E-23 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_00195 bdc2848e23d600f5f2e3be6b4f66a1c1 234 SMART SM00345 22 80 4.5E-15 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_00195 bdc2848e23d600f5f2e3be6b4f66a1c1 234 Gene3D G3DSA:1.10.10.10 7 81 3.8E-22 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_01970 2f0870edd85ebe6593b38999af9a4159 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 31-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DY252_01970 2f0870edd85ebe6593b38999af9a4159 213 SMART SM00525 186 206 3.9E-6 T 31-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DY252_01970 2f0870edd85ebe6593b38999af9a4159 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 167 4.0E-17 T 31-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DY252_01970 2f0870edd85ebe6593b38999af9a4159 213 TIGRFAM TIGR01083 nth: endonuclease III 5 194 1.6E-78 T 31-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 DY252_01970 2f0870edd85ebe6593b38999af9a4159 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 4.0E-6 T 31-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DY252_01970 2f0870edd85ebe6593b38999af9a4159 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 35.606 T 31-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 DY252_01970 2f0870edd85ebe6593b38999af9a4159 213 Gene3D G3DSA:1.10.340.30 21 132 2.6E-71 T 31-10-2018 DY252_01970 2f0870edd85ebe6593b38999af9a4159 213 SMART SM00478 38 185 6.7E-50 T 31-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DY252_01970 2f0870edd85ebe6593b38999af9a4159 213 SUPERFAMILY SSF48150 4 208 2.98E-69 T 31-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DY252_01970 2f0870edd85ebe6593b38999af9a4159 213 Gene3D G3DSA:1.10.1670.10 11 203 2.6E-71 T 31-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DY252_01970 2f0870edd85ebe6593b38999af9a4159 213 PIRSF PIRSF001435 1 211 4.6E-46 T 31-10-2018 DY252_01970 2f0870edd85ebe6593b38999af9a4159 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 1.4E-7 T 31-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 DY252_19660 a277e2d182761f8e52b3e549c4d2118a 359 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 198 214 - T 31-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DY252_19660 a277e2d182761f8e52b3e549c4d2118a 359 Gene3D G3DSA:1.10.340.30 25 140 2.5E-84 T 31-10-2018 DY252_19660 a277e2d182761f8e52b3e549c4d2118a 359 SUPERFAMILY SSF48150 11 228 5.97E-73 T 31-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DY252_19660 a277e2d182761f8e52b3e549c4d2118a 359 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 198 214 1.1E-5 T 31-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DY252_19660 a277e2d182761f8e52b3e549c4d2118a 359 Pfam PF14815 NUDIX domain 242 351 4.7E-23 T 31-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DY252_19660 a277e2d182761f8e52b3e549c4d2118a 359 SMART SM00478 47 196 3.4E-50 T 31-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DY252_19660 a277e2d182761f8e52b3e549c4d2118a 359 Gene3D G3DSA:3.90.79.10 229 356 2.7E-17 T 31-10-2018 DY252_19660 a277e2d182761f8e52b3e549c4d2118a 359 Pfam PF00633 Helix-hairpin-helix motif 107 135 2.9E-8 T 31-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 DY252_19660 a277e2d182761f8e52b3e549c4d2118a 359 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 44 161 1.5E-17 T 31-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DY252_19660 a277e2d182761f8e52b3e549c4d2118a 359 ProSitePatterns PS01155 Endonuclease III family signature. 110 139 - T 31-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 DY252_19660 a277e2d182761f8e52b3e549c4d2118a 359 SUPERFAMILY SSF55811 226 355 2.76E-23 T 31-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DY252_19660 a277e2d182761f8e52b3e549c4d2118a 359 Gene3D G3DSA:1.10.1670.10 14 218 2.5E-84 T 31-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DY252_19660 a277e2d182761f8e52b3e549c4d2118a 359 SMART SM00525 197 217 0.0012 T 31-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DY252_19660 a277e2d182761f8e52b3e549c4d2118a 359 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 11 273 4.1E-96 T 31-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 DY252_08565 98eaa6b5ae614b24824432f44022782e 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_08565 98eaa6b5ae614b24824432f44022782e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 7.1E-41 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08565 98eaa6b5ae614b24824432f44022782e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 7.1E-41 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08565 98eaa6b5ae614b24824432f44022782e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 7.1E-41 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08565 98eaa6b5ae614b24824432f44022782e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 7.1E-41 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08565 98eaa6b5ae614b24824432f44022782e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 7.1E-41 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08565 98eaa6b5ae614b24824432f44022782e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 7.1E-41 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08565 98eaa6b5ae614b24824432f44022782e 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 184 0.005 T 31-10-2018 DY252_08565 98eaa6b5ae614b24824432f44022782e 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 239 6.0E-68 T 31-10-2018 DY252_08565 98eaa6b5ae614b24824432f44022782e 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 3.6E-11 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08565 98eaa6b5ae614b24824432f44022782e 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 3.6E-11 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08565 98eaa6b5ae614b24824432f44022782e 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 3.6E-11 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08565 98eaa6b5ae614b24824432f44022782e 252 Gene3D G3DSA:3.40.50.720 1 248 4.6E-81 T 31-10-2018 DY252_08565 98eaa6b5ae614b24824432f44022782e 252 SUPERFAMILY SSF51735 3 239 6.24E-83 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_17190 426b80026142cd69602281ee4728cd84 624 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 105 533 3.0E-69 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_17190 426b80026142cd69602281ee4728cd84 624 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 13 609 1.1E-150 T 31-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ DY252_16780 378361142406692b291d6dc2e8ea7112 442 SUPERFAMILY SSF53756 1 428 5.23E-92 T 31-10-2018 DY252_16780 378361142406692b291d6dc2e8ea7112 442 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 253 411 2.4E-7 T 31-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 DY252_16780 378361142406692b291d6dc2e8ea7112 442 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 56 1.2E-11 T 31-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_16780 378361142406692b291d6dc2e8ea7112 442 Gene3D G3DSA:3.40.50.2000 3 415 5.7E-102 T 31-10-2018 DY252_16780 378361142406692b291d6dc2e8ea7112 442 Gene3D G3DSA:3.40.50.2000 241 414 5.7E-102 T 31-10-2018 DY252_00920 6615e2fc58b7a3b4be574fee51b8696f 417 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 13 199 3.0E-45 T 31-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 DY252_00920 6615e2fc58b7a3b4be574fee51b8696f 417 Gene3D G3DSA:3.40.1010.10 8 111 5.0E-13 T 31-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DY252_00920 6615e2fc58b7a3b4be574fee51b8696f 417 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 247 368 4.7E-28 T 31-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 DY252_00920 6615e2fc58b7a3b4be574fee51b8696f 417 Gene3D G3DSA:3.40.50.150 231 416 1.6E-58 T 31-10-2018 DY252_00920 6615e2fc58b7a3b4be574fee51b8696f 417 SUPERFAMILY SSF53790 11 218 6.15E-38 T 31-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DY252_00920 6615e2fc58b7a3b4be574fee51b8696f 417 SUPERFAMILY SSF53335 219 410 1.34E-26 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_00920 6615e2fc58b7a3b4be574fee51b8696f 417 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 10 195 8.2E-20 T 31-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DY252_00920 6615e2fc58b7a3b4be574fee51b8696f 417 PIRSF PIRSF036428 7 417 1.7E-124 T 31-10-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 DY252_15620 097b616c0cdfbfd13381881598aa063e 196 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 16 155 2.1E-33 T 31-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DY252_15620 097b616c0cdfbfd13381881598aa063e 196 SUPERFAMILY SSF53254 15 181 3.98E-38 T 31-10-2018 IPR029033 Histidine phosphatase superfamily DY252_15620 097b616c0cdfbfd13381881598aa063e 196 SMART SM00855 14 153 2.6E-18 T 31-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DY252_15620 097b616c0cdfbfd13381881598aa063e 196 PIRSF PIRSF000709 12 110 0.0047 T 31-10-2018 DY252_15620 097b616c0cdfbfd13381881598aa063e 196 PIRSF PIRSF000709 113 164 23.0 T 31-10-2018 DY252_15620 097b616c0cdfbfd13381881598aa063e 196 Gene3D G3DSA:3.40.50.1240 14 175 3.9E-35 T 31-10-2018 IPR029033 Histidine phosphatase superfamily DY252_13535 0395479ab09a7f3ac5c23d4866b5742a 421 Gene3D G3DSA:3.30.50.30 2 51 3.8E-24 T 31-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily DY252_13535 0395479ab09a7f3ac5c23d4866b5742a 421 SMART SM00382 110 262 3.0E-10 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_13535 0395479ab09a7f3ac5c23d4866b5742a 421 SMART SM00994 12 51 1.7E-24 T 31-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 DY252_13535 0395479ab09a7f3ac5c23d4866b5742a 421 SUPERFAMILY SSF57716 13 48 1.18E-11 T 31-10-2018 DY252_13535 0395479ab09a7f3ac5c23d4866b5742a 421 SUPERFAMILY SSF52540 63 399 5.63E-72 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_13535 0395479ab09a7f3ac5c23d4866b5742a 421 Gene3D G3DSA:3.40.50.300 57 312 2.2E-107 T 31-10-2018 DY252_13535 0395479ab09a7f3ac5c23d4866b5742a 421 Gene3D G3DSA:1.10.8.60 313 420 1.1E-40 T 31-10-2018 DY252_13535 0395479ab09a7f3ac5c23d4866b5742a 421 SMART SM01086 314 409 3.3E-33 T 31-10-2018 IPR019489 Clp ATPase, C-terminal DY252_13535 0395479ab09a7f3ac5c23d4866b5742a 421 Pfam PF07724 AAA domain (Cdc48 subfamily) 111 307 9.6E-50 T 31-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DY252_13535 0395479ab09a7f3ac5c23d4866b5742a 421 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 314 391 1.5E-16 T 31-10-2018 IPR019489 Clp ATPase, C-terminal DY252_13535 0395479ab09a7f3ac5c23d4866b5742a 421 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 409 9.6E-201 T 31-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 DY252_13535 0395479ab09a7f3ac5c23d4866b5742a 421 Pfam PF06689 ClpX C4-type zinc finger 13 50 6.0E-20 T 31-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 DY252_13535 0395479ab09a7f3ac5c23d4866b5742a 421 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 412 53.351 T 31-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 DY252_08070 15a3de5f5c9bb4f1d04d188e9507ba05 321 Gene3D G3DSA:3.40.50.80 107 225 1.1E-23 T 31-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DY252_08070 15a3de5f5c9bb4f1d04d188e9507ba05 321 Gene3D G3DSA:2.40.30.10 2 105 4.7E-23 T 31-10-2018 DY252_08070 15a3de5f5c9bb4f1d04d188e9507ba05 321 SUPERFAMILY SSF63380 6 105 1.61E-21 T 31-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DY252_08070 15a3de5f5c9bb4f1d04d188e9507ba05 321 SUPERFAMILY SSF52343 103 232 9.04E-28 T 31-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DY252_08070 15a3de5f5c9bb4f1d04d188e9507ba05 321 Gene3D G3DSA:3.10.20.30 229 321 6.5E-20 T 31-10-2018 IPR012675 Beta-grasp domain superfamily DY252_08070 15a3de5f5c9bb4f1d04d188e9507ba05 321 Pfam PF00970 Oxidoreductase FAD-binding domain 11 105 1.3E-5 T 31-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DY252_08070 15a3de5f5c9bb4f1d04d188e9507ba05 321 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 242 311 4.1E-8 T 31-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DY252_08070 15a3de5f5c9bb4f1d04d188e9507ba05 321 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 268 276 - T 31-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DY252_08070 15a3de5f5c9bb4f1d04d188e9507ba05 321 Pfam PF00175 Oxidoreductase NAD-binding domain 118 206 2.1E-5 T 31-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DY252_08070 15a3de5f5c9bb4f1d04d188e9507ba05 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 142 151 7.0E-30 T 31-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DY252_08070 15a3de5f5c9bb4f1d04d188e9507ba05 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 193 201 7.0E-30 T 31-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DY252_08070 15a3de5f5c9bb4f1d04d188e9507ba05 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 81 95 7.0E-30 T 31-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DY252_08070 15a3de5f5c9bb4f1d04d188e9507ba05 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 95 109 7.0E-30 T 31-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DY252_08070 15a3de5f5c9bb4f1d04d188e9507ba05 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 117 136 7.0E-30 T 31-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DY252_08070 15a3de5f5c9bb4f1d04d188e9507ba05 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 32 42 7.0E-30 T 31-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DY252_08070 15a3de5f5c9bb4f1d04d188e9507ba05 321 SUPERFAMILY SSF54292 215 315 3.01E-19 T 31-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DY252_15165 136fecc209b7b4ea50db8469acfde113 289 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 163 1.0E-49 T 31-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DY252_15165 136fecc209b7b4ea50db8469acfde113 289 PIRSF PIRSF000103 1 289 6.0E-74 T 31-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DY252_15165 136fecc209b7b4ea50db8469acfde113 289 Gene3D G3DSA:1.10.1040.10 164 289 2.2E-40 T 31-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DY252_15165 136fecc209b7b4ea50db8469acfde113 289 SUPERFAMILY SSF48179 164 288 1.7E-40 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_15165 136fecc209b7b4ea50db8469acfde113 289 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 31-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 DY252_15165 136fecc209b7b4ea50db8469acfde113 289 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 286 2.4E-35 T 31-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DY252_15165 136fecc209b7b4ea50db8469acfde113 289 SUPERFAMILY SSF51735 3 164 2.54E-53 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_15165 136fecc209b7b4ea50db8469acfde113 289 Gene3D G3DSA:3.40.50.720 1 163 1.5E-50 T 31-10-2018 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 SUPERFAMILY SSF82866 296 497 9.94E-50 T 31-10-2018 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 SUPERFAMILY SSF82693 135 330 1.07E-25 T 31-10-2018 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 Gene3D G3DSA:3.30.70.1440 669 865 0.0 T 31-10-2018 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1042 0.0 T 31-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.7E-110 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.7E-110 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.7E-110 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.7E-110 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.7E-110 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.7E-110 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.7E-110 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 1.7E-110 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.7E-110 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 SUPERFAMILY SSF82693 565 669 3.92E-34 T 31-10-2018 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 Gene3D G3DSA:3.30.2090.10 721 809 0.0 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 SUPERFAMILY SSF82866 805 1027 7.72E-42 T 31-10-2018 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 SUPERFAMILY SSF82714 722 809 7.72E-22 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 Gene3D G3DSA:1.20.1640.10 513 1022 0.0 T 31-10-2018 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 Gene3D G3DSA:1.20.1640.10 8 512 0.0 T 31-10-2018 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 Gene3D G3DSA:3.30.70.1430 567 668 0.0 T 31-10-2018 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 Pfam PF00873 AcrB/AcrD/AcrF family 1 1025 0.0 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 SUPERFAMILY SSF82714 183 271 1.57E-22 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 Gene3D G3DSA:3.30.70.1430 38 817 0.0 T 31-10-2018 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 SUPERFAMILY SSF82693 38 132 2.27E-28 T 31-10-2018 DY252_16360 fed30991f5e53ccd2ba99d7ef14edc49 1048 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 31-10-2018 DY252_14840 dd4fdc507241a23d942440f614868b6b 712 Pfam PF02743 Cache domain 36 323 4.0E-19 T 31-10-2018 IPR033479 Double Cache domain 1 DY252_14840 dd4fdc507241a23d942440f614868b6b 712 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 514 690 6.2E-28 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_14840 dd4fdc507241a23d942440f614868b6b 712 SUPERFAMILY SSF58104 391 705 6.67E-58 T 31-10-2018 DY252_14840 dd4fdc507241a23d942440f614868b6b 712 Gene3D G3DSA:3.30.450.20 212 341 3.5E-12 T 31-10-2018 DY252_14840 dd4fdc507241a23d942440f614868b6b 712 Gene3D G3DSA:1.10.287.950 417 711 3.7E-53 T 31-10-2018 DY252_14840 dd4fdc507241a23d942440f614868b6b 712 Gene3D G3DSA:1.10.8.500 362 414 2.2E-12 T 31-10-2018 DY252_14840 dd4fdc507241a23d942440f614868b6b 712 SMART SM00283 473 706 4.2E-42 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_09950 499df718a7de56e505cd4a1cfd37069d 557 SUPERFAMILY SSF51905 262 405 1.47E-18 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_09950 499df718a7de56e505cd4a1cfd37069d 557 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 150 263 6.3E-8 T 31-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DY252_09950 499df718a7de56e505cd4a1cfd37069d 557 SUPERFAMILY SSF51905 150 473 9.66E-27 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_09950 499df718a7de56e505cd4a1cfd37069d 557 SUPERFAMILY SSF52799 6 104 1.15E-5 T 31-10-2018 IPR029021 Protein-tyrosine phosphatase-like DY252_09950 499df718a7de56e505cd4a1cfd37069d 557 Gene3D G3DSA:3.50.50.60 264 405 4.0E-89 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_09950 499df718a7de56e505cd4a1cfd37069d 557 Gene3D G3DSA:3.50.50.60 152 470 4.0E-89 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_09950 499df718a7de56e505cd4a1cfd37069d 557 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 3 134 2.0E-38 T 31-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 DY252_09950 499df718a7de56e505cd4a1cfd37069d 557 Gene3D G3DSA:3.90.190.10 1 137 1.8E-39 T 31-10-2018 IPR029021 Protein-tyrosine phosphatase-like DY252_09950 499df718a7de56e505cd4a1cfd37069d 557 Pfam PF04273 Putative phosphatase (DUF442) 3 110 1.2E-34 T 31-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 DY252_20350 d4782c096586202edc988f30f856b035 424 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 423 3.4E-170 T 31-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DY252_20350 d4782c096586202edc988f30f856b035 424 Gene3D G3DSA:3.30.559.10 193 424 3.9E-94 T 31-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DY252_20350 d4782c096586202edc988f30f856b035 424 Pfam PF02817 e3 binding domain 129 162 3.5E-12 T 31-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DY252_20350 d4782c096586202edc988f30f856b035 424 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 194 422 7.5E-81 T 31-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DY252_20350 d4782c096586202edc988f30f856b035 424 Gene3D G3DSA:4.10.320.10 129 168 7.0E-14 T 31-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DY252_20350 d4782c096586202edc988f30f856b035 424 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 31-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DY252_20350 d4782c096586202edc988f30f856b035 424 SUPERFAMILY SSF52777 194 423 1.25E-88 T 31-10-2018 DY252_20350 d4782c096586202edc988f30f856b035 424 SUPERFAMILY SSF51230 1 96 7.72E-29 T 31-10-2018 IPR011053 Single hybrid motif DY252_20350 d4782c096586202edc988f30f856b035 424 SUPERFAMILY SSF47005 122 167 7.98E-11 T 31-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DY252_20350 d4782c096586202edc988f30f856b035 424 Pfam PF00364 Biotin-requiring enzyme 4 76 9.3E-23 T 31-10-2018 IPR000089 Biotin/lipoyl attachment DY252_20350 d4782c096586202edc988f30f856b035 424 Gene3D G3DSA:2.40.50.100 1 102 2.4E-27 T 31-10-2018 DY252_01900 2b6479d72584d3eea15988140757d840 526 Gene3D G3DSA:1.10.10.60 460 518 9.6E-23 T 31-10-2018 DY252_01900 2b6479d72584d3eea15988140757d840 526 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 6 50 8.5E-18 T 31-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DY252_01900 2b6479d72584d3eea15988140757d840 526 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 407 426 - T 31-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DY252_01900 2b6479d72584d3eea15988140757d840 526 Gene3D G3DSA:1.10.10.1330 165 280 1.5E-24 T 31-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily DY252_01900 2b6479d72584d3eea15988140757d840 526 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 518 5.4E-131 T 31-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DY252_01900 2b6479d72584d3eea15988140757d840 526 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 499 506 - T 31-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DY252_01900 2b6479d72584d3eea15988140757d840 526 Pfam PF04963 Sigma-54 factor, core binding domain 159 345 1.3E-49 T 31-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 DY252_01900 2b6479d72584d3eea15988140757d840 526 PIRSF PIRSF000774 1 521 1.7E-146 T 31-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DY252_01900 2b6479d72584d3eea15988140757d840 526 PRINTS PR00045 Sigma-54 factor signature 231 248 1.8E-31 T 31-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DY252_01900 2b6479d72584d3eea15988140757d840 526 PRINTS PR00045 Sigma-54 factor signature 435 446 1.8E-31 T 31-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DY252_01900 2b6479d72584d3eea15988140757d840 526 PRINTS PR00045 Sigma-54 factor signature 419 431 1.8E-31 T 31-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DY252_01900 2b6479d72584d3eea15988140757d840 526 PRINTS PR00045 Sigma-54 factor signature 494 512 1.8E-31 T 31-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DY252_01900 2b6479d72584d3eea15988140757d840 526 Pfam PF04552 Sigma-54, DNA binding domain 361 519 8.4E-71 T 31-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding DY252_10905 9fcf1f29e88fc43fae9caf3a8a8283da 434 SUPERFAMILY SSF55347 139 304 3.6E-54 T 31-10-2018 DY252_10905 9fcf1f29e88fc43fae9caf3a8a8283da 434 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 11 131 8.1E-15 T 31-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 DY252_10905 9fcf1f29e88fc43fae9caf3a8a8283da 434 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 185 207 - T 31-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DY252_10905 9fcf1f29e88fc43fae9caf3a8a8283da 434 PIRSF PIRSF000098 2 432 1.6E-159 T 31-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DY252_10905 9fcf1f29e88fc43fae9caf3a8a8283da 434 Gene3D G3DSA:3.30.360.10 138 344 8.0E-154 T 31-10-2018 DY252_10905 9fcf1f29e88fc43fae9caf3a8a8283da 434 Pfam PF00742 Homoserine dehydrogenase 139 317 3.1E-66 T 31-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DY252_10905 9fcf1f29e88fc43fae9caf3a8a8283da 434 SUPERFAMILY SSF55021 348 415 5.93E-11 T 31-10-2018 DY252_10905 9fcf1f29e88fc43fae9caf3a8a8283da 434 SUPERFAMILY SSF51735 3 160 1.13E-32 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_10905 9fcf1f29e88fc43fae9caf3a8a8283da 434 Gene3D G3DSA:3.30.70.260 345 418 8.0E-154 T 31-10-2018 DY252_10905 9fcf1f29e88fc43fae9caf3a8a8283da 434 Pfam PF01842 ACT domain 350 408 2.1E-8 T 31-10-2018 IPR002912 ACT domain DY252_10905 9fcf1f29e88fc43fae9caf3a8a8283da 434 Gene3D G3DSA:3.40.50.720 5 338 8.0E-154 T 31-10-2018 DY252_00645 ea91edceb5d4122991e96560cd172628 567 PRINTS PR00681 Ribosomal protein S1 signature 297 316 8.0E-82 T 31-10-2018 DY252_00645 ea91edceb5d4122991e96560cd172628 567 PRINTS PR00681 Ribosomal protein S1 signature 337 355 8.0E-82 T 31-10-2018 DY252_00645 ea91edceb5d4122991e96560cd172628 567 PRINTS PR00681 Ribosomal protein S1 signature 162 182 8.0E-82 T 31-10-2018 DY252_00645 ea91edceb5d4122991e96560cd172628 567 PRINTS PR00681 Ribosomal protein S1 signature 91 110 8.0E-82 T 31-10-2018 DY252_00645 ea91edceb5d4122991e96560cd172628 567 PRINTS PR00681 Ribosomal protein S1 signature 32 50 8.0E-82 T 31-10-2018 DY252_00645 ea91edceb5d4122991e96560cd172628 567 PRINTS PR00681 Ribosomal protein S1 signature 50 64 8.0E-82 T 31-10-2018 DY252_00645 ea91edceb5d4122991e96560cd172628 567 PRINTS PR00681 Ribosomal protein S1 signature 219 240 8.0E-82 T 31-10-2018 DY252_00645 ea91edceb5d4122991e96560cd172628 567 PRINTS PR00681 Ribosomal protein S1 signature 133 150 8.0E-82 T 31-10-2018 DY252_00645 ea91edceb5d4122991e96560cd172628 567 PRINTS PR00681 Ribosomal protein S1 signature 115 131 8.0E-82 T 31-10-2018 DY252_00645 ea91edceb5d4122991e96560cd172628 567 PIRSF PIRSF002111 1 542 1.6E-197 T 31-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 DY252_00645 ea91edceb5d4122991e96560cd172628 567 Pfam PF00575 S1 RNA binding domain 110 178 2.8E-10 T 31-10-2018 IPR003029 S1 domain GO:0003676 DY252_00645 ea91edceb5d4122991e96560cd172628 567 Pfam PF00575 S1 RNA binding domain 197 267 9.4E-21 T 31-10-2018 IPR003029 S1 domain GO:0003676 DY252_00645 ea91edceb5d4122991e96560cd172628 567 Pfam PF00575 S1 RNA binding domain 457 528 9.3E-14 T 31-10-2018 IPR003029 S1 domain GO:0003676 DY252_00645 ea91edceb5d4122991e96560cd172628 567 Pfam PF00575 S1 RNA binding domain 281 354 5.4E-21 T 31-10-2018 IPR003029 S1 domain GO:0003676 DY252_00645 ea91edceb5d4122991e96560cd172628 567 Pfam PF00575 S1 RNA binding domain 369 441 6.8E-18 T 31-10-2018 IPR003029 S1 domain GO:0003676 DY252_00645 ea91edceb5d4122991e96560cd172628 567 Pfam PF00575 S1 RNA binding domain 30 93 5.2E-7 T 31-10-2018 IPR003029 S1 domain GO:0003676 DY252_00645 ea91edceb5d4122991e96560cd172628 567 SUPERFAMILY SSF50249 354 444 1.79E-20 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_00645 ea91edceb5d4122991e96560cd172628 567 Gene3D G3DSA:2.40.50.140 365 452 3.7E-22 T 31-10-2018 DY252_00645 ea91edceb5d4122991e96560cd172628 567 Gene3D G3DSA:2.40.50.140 276 364 5.7E-29 T 31-10-2018 DY252_00645 ea91edceb5d4122991e96560cd172628 567 Gene3D G3DSA:2.40.50.140 23 107 3.6E-15 T 31-10-2018 DY252_00645 ea91edceb5d4122991e96560cd172628 567 SUPERFAMILY SSF50249 262 376 2.98E-27 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_00645 ea91edceb5d4122991e96560cd172628 567 SUPERFAMILY SSF50249 110 192 1.25E-12 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_00645 ea91edceb5d4122991e96560cd172628 567 SUPERFAMILY SSF50249 196 284 1.03E-26 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_00645 ea91edceb5d4122991e96560cd172628 567 SUPERFAMILY SSF50249 454 542 1.24E-16 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_00645 ea91edceb5d4122991e96560cd172628 567 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 13 528 1.4E-195 T 31-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 DY252_00645 ea91edceb5d4122991e96560cd172628 567 Gene3D G3DSA:2.40.50.140 194 275 1.8E-28 T 31-10-2018 DY252_00645 ea91edceb5d4122991e96560cd172628 567 SMART SM00316 197 267 1.9E-28 T 31-10-2018 IPR022967 RNA-binding domain, S1 DY252_00645 ea91edceb5d4122991e96560cd172628 567 SMART SM00316 110 178 5.6E-6 T 31-10-2018 IPR022967 RNA-binding domain, S1 DY252_00645 ea91edceb5d4122991e96560cd172628 567 SMART SM00316 30 94 6.1E-9 T 31-10-2018 IPR022967 RNA-binding domain, S1 DY252_00645 ea91edceb5d4122991e96560cd172628 567 SMART SM00316 369 441 9.3E-22 T 31-10-2018 IPR022967 RNA-binding domain, S1 DY252_00645 ea91edceb5d4122991e96560cd172628 567 SMART SM00316 456 528 1.1E-15 T 31-10-2018 IPR022967 RNA-binding domain, S1 DY252_00645 ea91edceb5d4122991e96560cd172628 567 SMART SM00316 282 354 6.5E-25 T 31-10-2018 IPR022967 RNA-binding domain, S1 DY252_00645 ea91edceb5d4122991e96560cd172628 567 SUPERFAMILY SSF50249 14 119 1.86E-20 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_00645 ea91edceb5d4122991e96560cd172628 567 Gene3D G3DSA:2.40.50.140 453 536 1.9E-15 T 31-10-2018 DY252_22160 86cbe09392172d70cc7c7bc5e084769b 670 Gene3D G3DSA:1.10.3810.10 102 297 7.1E-73 T 31-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_22160 86cbe09392172d70cc7c7bc5e084769b 670 SUPERFAMILY SSF56601 257 636 5.3E-116 T 31-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DY252_22160 86cbe09392172d70cc7c7bc5e084769b 670 Pfam PF00905 Penicillin binding protein transpeptidase domain 370 594 4.3E-29 T 31-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DY252_22160 86cbe09392172d70cc7c7bc5e084769b 670 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 113 633 2.6E-180 T 31-10-2018 DY252_22160 86cbe09392172d70cc7c7bc5e084769b 670 Gene3D G3DSA:3.40.710.10 298 657 8.8E-109 T 31-10-2018 DY252_22160 86cbe09392172d70cc7c7bc5e084769b 670 Pfam PF00912 Transglycosylase 102 275 2.7E-63 T 31-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_22160 86cbe09392172d70cc7c7bc5e084769b 670 SUPERFAMILY SSF53955 92 296 4.5E-74 T 31-10-2018 IPR023346 Lysozyme-like domain superfamily DY252_00025 86cbe09392172d70cc7c7bc5e084769b 670 Gene3D G3DSA:1.10.3810.10 102 297 7.1E-73 T 31-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_00025 86cbe09392172d70cc7c7bc5e084769b 670 SUPERFAMILY SSF56601 257 636 5.3E-116 T 31-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DY252_00025 86cbe09392172d70cc7c7bc5e084769b 670 Pfam PF00905 Penicillin binding protein transpeptidase domain 370 594 4.3E-29 T 31-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DY252_00025 86cbe09392172d70cc7c7bc5e084769b 670 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 113 633 2.6E-180 T 31-10-2018 DY252_00025 86cbe09392172d70cc7c7bc5e084769b 670 Gene3D G3DSA:3.40.710.10 298 657 8.8E-109 T 31-10-2018 DY252_00025 86cbe09392172d70cc7c7bc5e084769b 670 Pfam PF00912 Transglycosylase 102 275 2.7E-63 T 31-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_00025 86cbe09392172d70cc7c7bc5e084769b 670 SUPERFAMILY SSF53955 92 296 4.5E-74 T 31-10-2018 IPR023346 Lysozyme-like domain superfamily DY252_13650 85bac77bc0b6d390efc95513b3670ee4 244 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 237 2.8E-22 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_13650 85bac77bc0b6d390efc95513b3670ee4 244 Gene3D G3DSA:1.10.10.10 131 242 7.5E-33 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_13650 85bac77bc0b6d390efc95513b3670ee4 244 Gene3D G3DSA:3.40.50.2300 2 127 2.7E-40 T 31-10-2018 DY252_13650 85bac77bc0b6d390efc95513b3670ee4 244 SMART SM00448 7 117 1.7E-45 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_13650 85bac77bc0b6d390efc95513b3670ee4 244 Pfam PF00072 Response regulator receiver domain 9 118 4.7E-29 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_13650 85bac77bc0b6d390efc95513b3670ee4 244 SUPERFAMILY SSF46894 139 239 5.1E-26 T 31-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DY252_13650 85bac77bc0b6d390efc95513b3670ee4 244 SMART SM00862 161 237 1.3E-22 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_13650 85bac77bc0b6d390efc95513b3670ee4 244 SUPERFAMILY SSF52172 5 125 1.32E-41 T 31-10-2018 IPR011006 CheY-like superfamily DY252_13060 aae886e69a1caf4f578173994fbc63e5 312 Hamap MF_00367 GTPase Era [era]. 17 308 34.011 T 31-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_13060 aae886e69a1caf4f578173994fbc63e5 312 SUPERFAMILY SSF54814 193 309 2.22E-37 T 31-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DY252_13060 aae886e69a1caf4f578173994fbc63e5 312 SUPERFAMILY SSF52540 22 194 9.12E-47 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_13060 aae886e69a1caf4f578173994fbc63e5 312 Gene3D G3DSA:3.40.50.300 15 197 9.7E-51 T 31-10-2018 DY252_13060 aae886e69a1caf4f578173994fbc63e5 312 Gene3D G3DSA:3.30.300.20 198 311 4.4E-35 T 31-10-2018 IPR015946 K homology domain-like, alpha/beta DY252_13060 aae886e69a1caf4f578173994fbc63e5 312 Pfam PF07650 KH domain 220 296 7.7E-19 T 31-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_13060 aae886e69a1caf4f578173994fbc63e5 312 TIGRFAM TIGR00436 era: GTP-binding protein Era 20 291 2.2E-80 T 31-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_13060 aae886e69a1caf4f578173994fbc63e5 312 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 19 180 3.4E-30 T 31-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DY252_13060 aae886e69a1caf4f578173994fbc63e5 312 Pfam PF01926 50S ribosome-binding GTPase 22 136 4.2E-26 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_20295 0886d0f378445d3a64f98475db570477 340 Gene3D G3DSA:3.40.50.10800 108 327 1.0E-110 T 31-10-2018 DY252_20295 0886d0f378445d3a64f98475db570477 340 Gene3D G3DSA:3.40.50.10800 192 284 1.0E-110 T 31-10-2018 DY252_20295 0886d0f378445d3a64f98475db570477 340 Gene3D G3DSA:3.40.50.10800 28 309 1.0E-110 T 31-10-2018 DY252_20295 0886d0f378445d3a64f98475db570477 340 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 25 329 4.2E-117 T 31-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DY252_20295 0886d0f378445d3a64f98475db570477 340 SUPERFAMILY SSF142754 25 328 7.32E-116 T 31-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DY252_20295 0886d0f378445d3a64f98475db570477 340 Pfam PF02445 Quinolinate synthetase A protein 29 327 6.3E-116 T 31-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DY252_20295 0886d0f378445d3a64f98475db570477 340 Hamap MF_00568 Quinolinate synthase A [nadA]. 24 328 43.624 T 31-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DY252_19440 c831b4869422b3795c0df22b48a41e53 168 Gene3D G3DSA:1.20.1550.10 10 168 2.2E-20 T 31-10-2018 IPR023380 DsbB-like superfamily DY252_19440 c831b4869422b3795c0df22b48a41e53 168 SUPERFAMILY SSF158442 16 160 5.23E-30 T 31-10-2018 IPR023380 DsbB-like superfamily DY252_19440 c831b4869422b3795c0df22b48a41e53 168 Pfam PF02600 Disulfide bond formation protein DsbB 14 160 2.5E-29 T 31-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 DY252_19440 c831b4869422b3795c0df22b48a41e53 168 PIRSF PIRSF033913 15 168 1.2E-24 T 31-10-2018 IPR024199 Uncharacterised conserved protein, DsbB-like DY252_08530 911a2ccb7a1429b8e5286422c084ac95 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 455 2.9E-193 T 31-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DY252_08530 911a2ccb7a1429b8e5286422c084ac95 488 Gene3D G3DSA:3.20.20.70 2 486 4.3E-215 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_08530 911a2ccb7a1429b8e5286422c084ac95 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 486 84.459 T 31-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DY252_08530 911a2ccb7a1429b8e5286422c084ac95 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 31-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 DY252_08530 911a2ccb7a1429b8e5286422c084ac95 488 PIRSF PIRSF000130 1 487 4.5E-205 T 31-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DY252_08530 911a2ccb7a1429b8e5286422c084ac95 488 SMART SM01240 6 473 0.0 T 31-10-2018 DY252_08530 911a2ccb7a1429b8e5286422c084ac95 488 SMART SM00116 157 205 8.8E-4 T 31-10-2018 IPR000644 CBS domain DY252_08530 911a2ccb7a1429b8e5286422c084ac95 488 SMART SM00116 95 144 4.1E-12 T 31-10-2018 IPR000644 CBS domain DY252_08530 911a2ccb7a1429b8e5286422c084ac95 488 SUPERFAMILY SSF54631 62 203 4.04E-31 T 31-10-2018 DY252_08530 911a2ccb7a1429b8e5286422c084ac95 488 SUPERFAMILY SSF51412 4 477 1.01E-120 T 31-10-2018 DY252_08530 911a2ccb7a1429b8e5286422c084ac95 488 Pfam PF00571 CBS domain 92 142 3.3E-12 T 31-10-2018 IPR000644 CBS domain DY252_08530 911a2ccb7a1429b8e5286422c084ac95 488 Pfam PF00571 CBS domain 149 202 7.8E-5 T 31-10-2018 IPR000644 CBS domain DY252_08530 911a2ccb7a1429b8e5286422c084ac95 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 473 3.7E-160 T 31-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 DY252_04730 909dedb30505046533b2f176fde75346 297 SUPERFAMILY SSF48179 172 293 1.33E-27 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_04730 909dedb30505046533b2f176fde75346 297 Gene3D G3DSA:3.40.50.720 2 170 5.8E-57 T 31-10-2018 DY252_04730 909dedb30505046533b2f176fde75346 297 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 293 8.2E-77 T 31-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 DY252_04730 909dedb30505046533b2f176fde75346 297 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 171 291 5.6E-31 T 31-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain DY252_04730 909dedb30505046533b2f176fde75346 297 Gene3D G3DSA:1.10.1040.10 172 296 2.8E-39 T 31-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DY252_04730 909dedb30505046533b2f176fde75346 297 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 149 1.7E-40 T 31-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain DY252_04730 909dedb30505046533b2f176fde75346 297 SUPERFAMILY SSF51735 1 145 4.35E-21 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_19160 f26d8541f0e7df2928e8c86b1cac7457 416 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 18 411 4.5E-113 T 31-10-2018 IPR002155 Thiolase GO:0016747 DY252_19160 f26d8541f0e7df2928e8c86b1cac7457 416 SUPERFAMILY SSF53901 20 413 3.95E-61 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_19160 f26d8541f0e7df2928e8c86b1cac7457 416 Gene3D G3DSA:3.40.47.10 138 410 4.9E-125 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_19160 f26d8541f0e7df2928e8c86b1cac7457 416 Pfam PF02803 Thiolase, C-terminal domain 291 412 1.5E-48 T 31-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DY252_19160 f26d8541f0e7df2928e8c86b1cac7457 416 Pfam PF00108 Thiolase, N-terminal domain 17 281 4.3E-53 T 31-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DY252_19160 f26d8541f0e7df2928e8c86b1cac7457 416 Gene3D G3DSA:3.40.47.10 19 296 4.9E-125 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_19160 f26d8541f0e7df2928e8c86b1cac7457 416 PIRSF PIRSF000429 10 414 2.7E-110 T 31-10-2018 IPR002155 Thiolase GO:0016747 DY252_19160 f26d8541f0e7df2928e8c86b1cac7457 416 ProSitePatterns PS00099 Thiolases active site. 394 407 - T 31-10-2018 IPR020610 Thiolase, active site GO:0016747 DY252_19160 f26d8541f0e7df2928e8c86b1cac7457 416 ProSitePatterns PS00737 Thiolases signature 2. 359 375 - T 31-10-2018 IPR020613 Thiolase, conserved site GO:0016747 DY252_14920 389678e119618d720fd62eea7908f02b 449 SUPERFAMILY SSF51246 330 443 4.34E-45 T 31-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DY252_14920 389678e119618d720fd62eea7908f02b 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 2.2E-79 T 31-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DY252_14920 389678e119618d720fd62eea7908f02b 449 Gene3D G3DSA:3.30.470.130 1 446 1.4E-193 T 31-10-2018 DY252_14920 389678e119618d720fd62eea7908f02b 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 7.1E-225 T 31-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 DY252_14920 389678e119618d720fd62eea7908f02b 449 SMART SM00878 335 440 1.4E-67 T 31-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DY252_14920 389678e119618d720fd62eea7908f02b 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 31-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DY252_14920 389678e119618d720fd62eea7908f02b 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.6E-46 T 31-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DY252_14920 389678e119618d720fd62eea7908f02b 449 SUPERFAMILY SSF56059 83 345 6.4E-70 T 31-10-2018 DY252_14920 389678e119618d720fd62eea7908f02b 449 SUPERFAMILY SSF52440 1 113 2.09E-50 T 31-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DY252_14920 389678e119618d720fd62eea7908f02b 449 Pfam PF02785 Biotin carboxylase C-terminal domain 335 440 2.4E-41 T 31-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DY252_14920 389678e119618d720fd62eea7908f02b 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 31-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DY252_04850 48e92cbe782ee66d643cc6c434ef9bed 473 Pfam PF05193 Peptidase M16 inactive domain 203 385 4.9E-32 T 31-10-2018 IPR007863 Peptidase M16, C-terminal DY252_04850 48e92cbe782ee66d643cc6c434ef9bed 473 Gene3D G3DSA:3.30.830.10 35 256 1.2E-74 T 31-10-2018 DY252_04850 48e92cbe782ee66d643cc6c434ef9bed 473 SUPERFAMILY SSF63411 267 454 2.87E-36 T 31-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DY252_04850 48e92cbe782ee66d643cc6c434ef9bed 473 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 70 93 - T 31-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 DY252_04850 48e92cbe782ee66d643cc6c434ef9bed 473 Pfam PF00675 Insulinase (Peptidase family M16) 50 195 7.1E-26 T 31-10-2018 IPR011765 Peptidase M16, N-terminal DY252_04850 48e92cbe782ee66d643cc6c434ef9bed 473 Gene3D G3DSA:3.30.830.10 258 452 5.5E-46 T 31-10-2018 DY252_04850 48e92cbe782ee66d643cc6c434ef9bed 473 SUPERFAMILY SSF63411 38 247 1.06E-60 T 31-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DY252_13025 cded8d21804392633754d409450b4c9c 246 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 8 236 38.872 T 31-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 DY252_13025 cded8d21804392633754d409450b4c9c 246 SUPERFAMILY SSF55729 82 236 8.46E-22 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_13025 cded8d21804392633754d409450b4c9c 246 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 19 88 8.1E-14 T 31-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 DY252_13025 cded8d21804392633754d409450b4c9c 246 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 108 228 3.3E-37 T 31-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 DY252_13025 cded8d21804392633754d409450b4c9c 246 PIRSF PIRSF037208 1 246 9.6E-86 T 31-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 DY252_19380 69008ffbac70ff497757b522d610b0e0 489 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 477 1.5E-219 T 31-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 DY252_19380 69008ffbac70ff497757b522d610b0e0 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 31-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DY252_19380 69008ffbac70ff497757b522d610b0e0 489 Gene3D G3DSA:3.40.309.10 259 448 5.4E-185 T 31-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DY252_19380 69008ffbac70ff497757b522d610b0e0 489 Gene3D G3DSA:3.40.605.10 25 473 5.4E-185 T 31-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_19380 69008ffbac70ff497757b522d610b0e0 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 31-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DY252_19380 69008ffbac70ff497757b522d610b0e0 489 Pfam PF00171 Aldehyde dehydrogenase family 19 478 3.1E-173 T 31-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DY252_19380 69008ffbac70ff497757b522d610b0e0 489 SUPERFAMILY SSF53720 8 482 3.01E-176 T 31-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DY252_18450 96b2863a95c6a0f0d7486674ca3b0c4a 567 Gene3D G3DSA:3.40.50.300 320 559 5.3E-58 T 31-10-2018 DY252_18450 96b2863a95c6a0f0d7486674ca3b0c4a 567 SMART SM00382 352 546 4.1E-14 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_18450 96b2863a95c6a0f0d7486674ca3b0c4a 567 Pfam PF00005 ABC transporter 344 491 2.2E-24 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_18450 96b2863a95c6a0f0d7486674ca3b0c4a 567 Gene3D G3DSA:1.20.1560.10 3 315 2.7E-54 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_18450 96b2863a95c6a0f0d7486674ca3b0c4a 567 SUPERFAMILY SSF52540 319 535 3.72E-52 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18450 96b2863a95c6a0f0d7486674ca3b0c4a 567 SUPERFAMILY SSF90123 14 312 2.09E-52 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_18450 96b2863a95c6a0f0d7486674ca3b0c4a 567 Pfam PF00664 ABC transporter transmembrane region 15 277 1.1E-27 T 31-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DY252_01095 2d71ae000a75887420b69e5b772eac9d 390 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 103 1.6E-36 T 31-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DY252_01095 2d71ae000a75887420b69e5b772eac9d 390 SUPERFAMILY SSF55973 5 112 1.29E-36 T 31-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DY252_01095 2d71ae000a75887420b69e5b772eac9d 390 PIRSF PIRSF000497 1 389 5.2E-153 T 31-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DY252_01095 2d71ae000a75887420b69e5b772eac9d 390 Pfam PF02772 S-adenosylmethionine synthetase, central domain 118 233 5.1E-35 T 31-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DY252_01095 2d71ae000a75887420b69e5b772eac9d 390 SUPERFAMILY SSF55973 115 234 1.0E-41 T 31-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DY252_01095 2d71ae000a75887420b69e5b772eac9d 390 Gene3D G3DSA:3.30.300.10 105 379 1.2E-155 T 31-10-2018 DY252_01095 2d71ae000a75887420b69e5b772eac9d 390 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 31-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DY252_01095 2d71ae000a75887420b69e5b772eac9d 390 Gene3D G3DSA:3.30.300.10 7 235 1.2E-155 T 31-10-2018 DY252_01095 2d71ae000a75887420b69e5b772eac9d 390 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 387 1.1E-145 T 31-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DY252_01095 2d71ae000a75887420b69e5b772eac9d 390 SUPERFAMILY SSF55973 235 388 2.43E-61 T 31-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DY252_01095 2d71ae000a75887420b69e5b772eac9d 390 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 388 47.176 T 31-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DY252_01095 2d71ae000a75887420b69e5b772eac9d 390 Gene3D G3DSA:3.30.300.10 13 272 1.2E-155 T 31-10-2018 DY252_01095 2d71ae000a75887420b69e5b772eac9d 390 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 31-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DY252_01095 2d71ae000a75887420b69e5b772eac9d 390 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 377 1.4E-60 T 31-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DY252_08750 61b2cf382b74716a21163180e2e999b7 289 Gene3D G3DSA:3.40.190.10 206 252 4.9E-6 T 31-10-2018 DY252_08750 61b2cf382b74716a21163180e2e999b7 289 SUPERFAMILY SSF53850 89 284 9.41E-29 T 31-10-2018 DY252_08750 61b2cf382b74716a21163180e2e999b7 289 Gene3D G3DSA:3.40.190.10 88 183 2.4E-16 T 31-10-2018 DY252_08750 61b2cf382b74716a21163180e2e999b7 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.1E-17 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_08750 61b2cf382b74716a21163180e2e999b7 289 SUPERFAMILY SSF46785 1 110 1.75E-18 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_08750 61b2cf382b74716a21163180e2e999b7 289 Gene3D G3DSA:3.40.190.10 253 272 4.9E-6 T 31-10-2018 DY252_08750 61b2cf382b74716a21163180e2e999b7 289 Pfam PF03466 LysR substrate binding domain 87 279 7.3E-25 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_08750 61b2cf382b74716a21163180e2e999b7 289 Gene3D G3DSA:1.10.10.10 2 87 3.5E-20 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_15485 d11237638b9b50f160c4d7f38bd509af 364 SUPERFAMILY SSF51395 1 358 1.72E-115 T 31-10-2018 DY252_15485 d11237638b9b50f160c4d7f38bd509af 364 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 338 5.9E-68 T 31-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DY252_15485 d11237638b9b50f160c4d7f38bd509af 364 Gene3D G3DSA:3.20.20.70 1 356 6.9E-124 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_18180 7b3be1e51fc1734b0aa951134bd8bd00 96 Gene3D G3DSA:2.30.30.110 1 96 5.8E-23 T 31-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor DY252_18180 7b3be1e51fc1734b0aa951134bd8bd00 96 SUPERFAMILY SSF50118 5 96 2.94E-19 T 31-10-2018 DY252_18180 7b3be1e51fc1734b0aa951134bd8bd00 96 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 13 95 3.0E-11 T 31-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 DY252_18180 7b3be1e51fc1734b0aa951134bd8bd00 96 Pfam PF01845 CcdB protein 12 95 1.3E-21 T 31-10-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 DY252_18555 c8b680f802d0f424b335f4e2a62e06e8 467 SMART SM00116 225 273 1.7E-4 T 31-10-2018 IPR000644 CBS domain DY252_18555 c8b680f802d0f424b335f4e2a62e06e8 467 Pfam PF01769 Divalent cation transporter 338 459 1.4E-26 T 31-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 DY252_18555 c8b680f802d0f424b335f4e2a62e06e8 467 Gene3D G3DSA:3.10.580.10 150 277 6.2E-36 T 31-10-2018 DY252_18555 c8b680f802d0f424b335f4e2a62e06e8 467 SUPERFAMILY SSF161093 296 466 9.02E-49 T 31-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 DY252_18555 c8b680f802d0f424b335f4e2a62e06e8 467 SMART SM00924 50 153 1.8E-27 T 31-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain DY252_18555 c8b680f802d0f424b335f4e2a62e06e8 467 SUPERFAMILY SSF158791 24 150 4.97E-26 T 31-10-2018 DY252_18555 c8b680f802d0f424b335f4e2a62e06e8 467 Pfam PF00571 CBS domain 218 273 1.1E-5 T 31-10-2018 IPR000644 CBS domain DY252_18555 c8b680f802d0f424b335f4e2a62e06e8 467 Gene3D G3DSA:1.25.60.10 23 148 6.9E-15 T 31-10-2018 IPR038076 MgtE, N-terminal domain superfamily DY252_18555 c8b680f802d0f424b335f4e2a62e06e8 467 SUPERFAMILY SSF54631 152 292 4.45E-27 T 31-10-2018 DY252_18555 c8b680f802d0f424b335f4e2a62e06e8 467 Gene3D G3DSA:1.10.357.20 291 466 3.0E-50 T 31-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain DY252_18555 c8b680f802d0f424b335f4e2a62e06e8 467 TIGRFAM TIGR00400 mgtE: magnesium transporter 35 466 1.6E-89 T 31-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 DY252_18555 c8b680f802d0f424b335f4e2a62e06e8 467 Pfam PF03448 MgtE intracellular N domain 50 150 4.5E-20 T 31-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain DY252_07085 87cc4ac18f628232ef6a961b8b32a020 316 SUPERFAMILY SSF103481 59 150 1.83E-8 T 31-10-2018 DY252_07085 87cc4ac18f628232ef6a961b8b32a020 316 Pfam PF00892 EamA-like transporter family 16 147 1.1E-16 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_07085 87cc4ac18f628232ef6a961b8b32a020 316 Pfam PF00892 EamA-like transporter family 162 296 4.5E-17 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_07085 87cc4ac18f628232ef6a961b8b32a020 316 SUPERFAMILY SSF103481 196 300 3.27E-13 T 31-10-2018 DY252_09060 73123943d49925ecb2e5d98e12c8f99c 64 SUPERFAMILY SSF55129 8 63 8.89E-21 T 31-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DY252_09060 73123943d49925ecb2e5d98e12c8f99c 64 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 10 63 2.4E-26 T 31-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_09060 73123943d49925ecb2e5d98e12c8f99c 64 PIRSF PIRSF002211 1 64 2.1E-26 T 31-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_09060 73123943d49925ecb2e5d98e12c8f99c 64 Gene3D G3DSA:3.30.1390.20 5 63 9.8E-26 T 31-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DY252_09060 73123943d49925ecb2e5d98e12c8f99c 64 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 3 63 19.512 T 31-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_09060 73123943d49925ecb2e5d98e12c8f99c 64 Pfam PF00327 Ribosomal protein L30p/L7e 10 59 3.2E-18 T 31-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DY252_06100 d87509588d7271a000a9ba17791df72c 375 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 130 3.1E-27 T 31-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DY252_06100 d87509588d7271a000a9ba17791df72c 375 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 144 259 3.4E-8 T 31-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DY252_06100 d87509588d7271a000a9ba17791df72c 375 SUPERFAMILY SSF55347 135 315 4.41E-40 T 31-10-2018 DY252_06100 d87509588d7271a000a9ba17791df72c 375 Gene3D G3DSA:3.30.360.10 132 372 1.2E-68 T 31-10-2018 DY252_06100 d87509588d7271a000a9ba17791df72c 375 Gene3D G3DSA:3.40.50.720 1 131 1.6E-40 T 31-10-2018 DY252_06100 d87509588d7271a000a9ba17791df72c 375 SUPERFAMILY SSF51735 4 159 2.49E-51 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_09025 7ddbf9bfc384d024b1d423629866b5e1 105 SUPERFAMILY SSF50104 4 102 1.5E-33 T 31-10-2018 IPR008991 Translation protein SH3-like domain superfamily DY252_09025 7ddbf9bfc384d024b1d423629866b5e1 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 6.6E-38 T 31-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_09025 7ddbf9bfc384d024b1d423629866b5e1 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 40 103 7.3E-26 T 31-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_09025 7ddbf9bfc384d024b1d423629866b5e1 105 SMART SM00739 4 31 4.8E-5 T 31-10-2018 IPR005824 KOW DY252_09025 7ddbf9bfc384d024b1d423629866b5e1 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 31-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_09025 7ddbf9bfc384d024b1d423629866b5e1 105 Gene3D G3DSA:2.30.30.30 2 104 4.1E-38 T 31-10-2018 IPR014722 Ribosomal protein L2, domain 2 DY252_09025 7ddbf9bfc384d024b1d423629866b5e1 105 Pfam PF00467 KOW motif 7 37 3.4E-6 T 31-10-2018 IPR005824 KOW DY252_09025 7ddbf9bfc384d024b1d423629866b5e1 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 21.307 T 31-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_11630 f0d5aa784a282bd2b0ff05fe114a45f4 406 SUPERFAMILY SSF102405 68 279 2.2E-43 T 31-10-2018 DY252_11630 f0d5aa784a282bd2b0ff05fe114a45f4 406 Gene3D G3DSA:1.10.10.10 330 403 4.3E-21 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_11630 f0d5aa784a282bd2b0ff05fe114a45f4 406 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 63 277 1.4E-68 T 31-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DY252_11630 f0d5aa784a282bd2b0ff05fe114a45f4 406 Gene3D G3DSA:3.40.50.450 1 281 1.9E-103 T 31-10-2018 DY252_11630 f0d5aa784a282bd2b0ff05fe114a45f4 406 Pfam PF02481 DNA recombination-mediator protein A 63 268 2.5E-74 T 31-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DY252_12855 293e4c246f8ff48ccaf17ca1a7718c85 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 6 323 9.5E-90 T 31-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DY252_12855 293e4c246f8ff48ccaf17ca1a7718c85 324 SUPERFAMILY SSF55326 4 142 1.55E-31 T 31-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DY252_12855 293e4c246f8ff48ccaf17ca1a7718c85 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 30 142 2.0E-19 T 31-10-2018 IPR016188 PurM-like, N-terminal domain DY252_12855 293e4c246f8ff48ccaf17ca1a7718c85 324 PIRSF PIRSF005303 1 323 2.1E-81 T 31-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DY252_12855 293e4c246f8ff48ccaf17ca1a7718c85 324 Gene3D G3DSA:3.90.650.10 150 323 2.8E-44 T 31-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DY252_12855 293e4c246f8ff48ccaf17ca1a7718c85 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 154 291 4.6E-9 T 31-10-2018 IPR010918 PurM-like, C-terminal domain DY252_12855 293e4c246f8ff48ccaf17ca1a7718c85 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 5 323 25.107 T 31-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DY252_12855 293e4c246f8ff48ccaf17ca1a7718c85 324 SUPERFAMILY SSF56042 147 306 4.49E-33 T 31-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DY252_12855 293e4c246f8ff48ccaf17ca1a7718c85 324 Gene3D G3DSA:3.30.1330.10 3 148 2.1E-37 T 31-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DY252_00555 11dfe8cc2b5ae51c4e962df9e5d22c21 576 SUPERFAMILY SSF161098 17 287 1.59E-49 T 31-10-2018 IPR035906 MetI-like superfamily DY252_00555 11dfe8cc2b5ae51c4e962df9e5d22c21 576 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 372 562 2.9E-17 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_00555 11dfe8cc2b5ae51c4e962df9e5d22c21 576 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 273 3.0E-14 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_00555 11dfe8cc2b5ae51c4e962df9e5d22c21 576 Gene3D G3DSA:1.10.3720.10 293 556 1.8E-44 T 31-10-2018 IPR035906 MetI-like superfamily DY252_00555 11dfe8cc2b5ae51c4e962df9e5d22c21 576 Gene3D G3DSA:1.10.3720.10 17 284 1.5E-57 T 31-10-2018 IPR035906 MetI-like superfamily DY252_00555 11dfe8cc2b5ae51c4e962df9e5d22c21 576 SUPERFAMILY SSF161098 303 560 8.72E-47 T 31-10-2018 IPR035906 MetI-like superfamily DY252_12175 7f4a6659082bb4ff389da4843311221f 255 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 8 242 1.3E-68 T 31-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 DY252_12175 7f4a6659082bb4ff389da4843311221f 255 Pfam PF01975 Survival protein SurE 9 191 4.2E-57 T 31-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 DY252_12175 7f4a6659082bb4ff389da4843311221f 255 Gene3D G3DSA:3.40.1210.10 7 255 5.1E-89 T 31-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 DY252_12175 7f4a6659082bb4ff389da4843311221f 255 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 7 255 36.105 T 31-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 DY252_12175 7f4a6659082bb4ff389da4843311221f 255 SUPERFAMILY SSF64167 8 253 1.57E-81 T 31-10-2018 DY252_07230 beb562ee5276b664192c9bba6516cb79 176 Pfam PF08241 Methyltransferase domain 25 110 1.0E-10 T 31-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DY252_07230 beb562ee5276b664192c9bba6516cb79 176 Gene3D G3DSA:3.40.50.150 1 174 1.9E-26 T 31-10-2018 DY252_07230 beb562ee5276b664192c9bba6516cb79 176 SUPERFAMILY SSF53335 10 147 1.66E-24 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 Gene3D G3DSA:1.20.1640.10 12 507 6.7E-225 T 31-10-2018 DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 Gene3D G3DSA:1.20.1640.10 508 1005 6.7E-225 T 31-10-2018 DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 SUPERFAMILY SSF82866 296 493 4.32E-31 T 31-10-2018 DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 Gene3D G3DSA:3.30.70.1440 654 853 6.7E-225 T 31-10-2018 DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 SUPERFAMILY SSF82693 557 641 3.53E-6 T 31-10-2018 DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 Gene3D G3DSA:3.30.70.1430 42 803 6.7E-225 T 31-10-2018 DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 SUPERFAMILY SSF82693 42 137 9.42E-18 T 31-10-2018 DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 Gene3D G3DSA:3.30.2090.10 181 273 6.7E-225 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 Gene3D G3DSA:3.30.2090.10 705 795 6.7E-225 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 SUPERFAMILY SSF82866 797 1014 2.09E-40 T 31-10-2018 DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 Pfam PF00873 AcrB/AcrD/AcrF family 6 1008 1.5E-139 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 SUPERFAMILY SSF82693 138 327 9.29E-16 T 31-10-2018 DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.6E-18 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.6E-18 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 1.6E-18 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 1.6E-18 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.6E-18 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 Gene3D G3DSA:3.30.70.1320 138 330 6.7E-225 T 31-10-2018 DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 Gene3D G3DSA:3.30.70.1430 555 653 6.7E-225 T 31-10-2018 DY252_21005 f9bca25d03f105d163ecdc4e5547e3ed 1028 SUPERFAMILY SSF82714 711 788 1.1E-5 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_13175 3171a19aea53d6bb68d165e156fed62b 332 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 15 62 2.9E-9 T 31-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DY252_13175 3171a19aea53d6bb68d165e156fed62b 332 Hamap MF_00206 Lipoyl synthase [lipA]. 1 311 151.965 T 31-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DY252_13175 3171a19aea53d6bb68d165e156fed62b 332 SUPERFAMILY SSF102114 38 302 1.03E-61 T 31-10-2018 DY252_13175 3171a19aea53d6bb68d165e156fed62b 332 PIRSF PIRSF005963 1 326 3.6E-135 T 31-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DY252_13175 3171a19aea53d6bb68d165e156fed62b 332 Pfam PF04055 Radical SAM superfamily 80 239 5.3E-13 T 31-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DY252_13175 3171a19aea53d6bb68d165e156fed62b 332 Gene3D G3DSA:3.20.20.70 75 297 1.1E-17 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_13175 3171a19aea53d6bb68d165e156fed62b 332 TIGRFAM TIGR00510 lipA: lipoyl synthase 20 308 1.8E-115 T 31-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DY252_13175 3171a19aea53d6bb68d165e156fed62b 332 SMART SM00729 73 278 1.0E-10 T 31-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DY252_13700 b8911433e9e84211b46697de97b75da5 501 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 31-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DY252_13700 b8911433e9e84211b46697de97b75da5 501 Pfam PF00171 Aldehyde dehydrogenase family 30 493 8.1E-174 T 31-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DY252_13700 b8911433e9e84211b46697de97b75da5 501 SUPERFAMILY SSF53720 16 497 1.11E-168 T 31-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DY252_13700 b8911433e9e84211b46697de97b75da5 501 Gene3D G3DSA:3.40.605.10 11 275 5.9E-100 T 31-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_13700 b8911433e9e84211b46697de97b75da5 501 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 31-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DY252_13700 b8911433e9e84211b46697de97b75da5 501 Gene3D G3DSA:3.40.309.10 276 498 3.3E-80 T 31-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DY252_09395 6337e45f7796447c8b2e0093880e8cce 140 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 31-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DY252_09395 6337e45f7796447c8b2e0093880e8cce 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 33.756 T 31-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DY252_09395 6337e45f7796447c8b2e0093880e8cce 140 Gene3D G3DSA:3.30.70.141 1 139 4.6E-54 T 31-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DY252_09395 6337e45f7796447c8b2e0093880e8cce 140 SUPERFAMILY SSF54919 1 139 7.99E-55 T 31-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DY252_09395 6337e45f7796447c8b2e0093880e8cce 140 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.3E-52 T 31-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DY252_09395 6337e45f7796447c8b2e0093880e8cce 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 7.7E-34 T 31-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DY252_09395 6337e45f7796447c8b2e0093880e8cce 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 7.7E-34 T 31-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DY252_09395 6337e45f7796447c8b2e0093880e8cce 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 7.7E-34 T 31-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DY252_09395 6337e45f7796447c8b2e0093880e8cce 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 7.7E-34 T 31-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DY252_09395 6337e45f7796447c8b2e0093880e8cce 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 7.7E-34 T 31-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DY252_09395 6337e45f7796447c8b2e0093880e8cce 140 SMART SM00562 3 140 3.9E-80 T 31-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DY252_14175 c50e9ea65be51a1b610935c2fa7fe522 257 Gene3D G3DSA:3.40.50.720 5 257 1.5E-70 T 31-10-2018 DY252_14175 c50e9ea65be51a1b610935c2fa7fe522 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 256 2.8E-58 T 31-10-2018 DY252_14175 c50e9ea65be51a1b610935c2fa7fe522 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 2.5E-6 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_14175 c50e9ea65be51a1b610935c2fa7fe522 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 2.5E-6 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_14175 c50e9ea65be51a1b610935c2fa7fe522 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 2.5E-6 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_14175 c50e9ea65be51a1b610935c2fa7fe522 257 SUPERFAMILY SSF51735 13 256 1.07E-71 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_14175 c50e9ea65be51a1b610935c2fa7fe522 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_14175 c50e9ea65be51a1b610935c2fa7fe522 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 4.5E-27 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_14175 c50e9ea65be51a1b610935c2fa7fe522 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 4.5E-27 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_14175 c50e9ea65be51a1b610935c2fa7fe522 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 4.5E-27 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_14175 c50e9ea65be51a1b610935c2fa7fe522 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 4.5E-27 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_14175 c50e9ea65be51a1b610935c2fa7fe522 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 4.5E-27 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_14175 c50e9ea65be51a1b610935c2fa7fe522 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 4.5E-27 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_10190 1eb0abcbe3a8324fbf332fb0cec9379a 152 SMART SM00344 3 112 1.2E-42 T 31-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DY252_10190 1eb0abcbe3a8324fbf332fb0cec9379a 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 9.4E-17 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_10190 1eb0abcbe3a8324fbf332fb0cec9379a 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 9.4E-17 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_10190 1eb0abcbe3a8324fbf332fb0cec9379a 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 9.4E-17 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_10190 1eb0abcbe3a8324fbf332fb0cec9379a 152 Gene3D G3DSA:3.30.70.920 57 139 1.4E-24 T 31-10-2018 DY252_10190 1eb0abcbe3a8324fbf332fb0cec9379a 152 Gene3D G3DSA:1.10.10.10 1 56 1.5E-24 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_10190 1eb0abcbe3a8324fbf332fb0cec9379a 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 31-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DY252_10190 1eb0abcbe3a8324fbf332fb0cec9379a 152 SUPERFAMILY SSF46785 2 62 7.59E-18 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_10190 1eb0abcbe3a8324fbf332fb0cec9379a 152 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 1.5E-20 T 31-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DY252_10190 1eb0abcbe3a8324fbf332fb0cec9379a 152 SUPERFAMILY SSF54909 67 152 7.11E-20 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_10190 1eb0abcbe3a8324fbf332fb0cec9379a 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 6.2E-20 T 31-10-2018 DY252_10135 66fbd1ad1e861bc5fe0de714383ba68e 673 SMART SM00387 535 645 3.8E-30 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_10135 66fbd1ad1e861bc5fe0de714383ba68e 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 642 2.2E-9 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_10135 66fbd1ad1e861bc5fe0de714383ba68e 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 572 586 2.2E-9 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_10135 66fbd1ad1e861bc5fe0de714383ba68e 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 623 2.2E-9 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_10135 66fbd1ad1e861bc5fe0de714383ba68e 673 Pfam PF07695 7TM diverse intracellular signalling 196 401 1.9E-15 T 31-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 DY252_10135 66fbd1ad1e861bc5fe0de714383ba68e 673 Gene3D G3DSA:1.10.287.130 417 495 1.9E-12 T 31-10-2018 DY252_10135 66fbd1ad1e861bc5fe0de714383ba68e 673 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 538 644 2.5E-17 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_10135 66fbd1ad1e861bc5fe0de714383ba68e 673 Gene3D G3DSA:3.30.565.10 496 643 3.4E-31 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_10135 66fbd1ad1e861bc5fe0de714383ba68e 673 SMART SM00388 425 492 2.2E-7 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_10135 66fbd1ad1e861bc5fe0de714383ba68e 673 Pfam PF00512 His Kinase A (phospho-acceptor) domain 426 491 1.0E-8 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_10135 66fbd1ad1e861bc5fe0de714383ba68e 673 SUPERFAMILY SSF47384 417 487 1.26E-11 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_10135 66fbd1ad1e861bc5fe0de714383ba68e 673 SUPERFAMILY SSF55874 485 643 1.96E-32 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_01820 76cdb36029d059e614e19fd02f18119d 248 Gene3D G3DSA:3.30.1600.10 32 168 5.7E-75 T 31-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily DY252_01820 76cdb36029d059e614e19fd02f18119d 248 Gene3D G3DSA:3.40.50.1220 18 239 5.7E-75 T 31-10-2018 DY252_01820 76cdb36029d059e614e19fd02f18119d 248 Pfam PF02146 Sir2 family 23 196 2.2E-43 T 31-10-2018 IPR003000 Sirtuin family GO:0070403 DY252_01820 76cdb36029d059e614e19fd02f18119d 248 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 17 247 54.064 T 31-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 DY252_01820 76cdb36029d059e614e19fd02f18119d 248 SUPERFAMILY SSF52467 7 245 8.88E-72 T 31-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DY252_02155 c668f5b17058ed780f111758acee0ed9 252 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 89 7.2E-12 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_02155 c668f5b17058ed780f111758acee0ed9 252 SUPERFAMILY SSF46785 28 108 9.89E-15 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_02155 c668f5b17058ed780f111758acee0ed9 252 SMART SM00345 31 89 9.5E-10 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_02155 c668f5b17058ed780f111758acee0ed9 252 Gene3D G3DSA:1.10.10.10 25 91 1.4E-16 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_02155 c668f5b17058ed780f111758acee0ed9 252 SMART SM00895 99 222 4.7E-18 T 31-10-2018 IPR011711 GntR, C-terminal DY252_02155 c668f5b17058ed780f111758acee0ed9 252 Gene3D G3DSA:1.20.120.530 92 231 8.0E-25 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_02155 c668f5b17058ed780f111758acee0ed9 252 SUPERFAMILY SSF48008 95 227 5.75E-27 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_02155 c668f5b17058ed780f111758acee0ed9 252 Pfam PF07729 FCD domain 99 221 5.9E-23 T 31-10-2018 IPR011711 GntR, C-terminal DY252_21625 f30ec3be572cbcfedc30fc20e6fd71e5 520 Pfam PF03109 ABC1 family 113 230 2.0E-34 T 31-10-2018 IPR004147 UbiB domain DY252_21625 f30ec3be572cbcfedc30fc20e6fd71e5 520 SUPERFAMILY SSF56112 95 432 1.2E-41 T 31-10-2018 IPR011009 Protein kinase-like domain superfamily DY252_21625 f30ec3be572cbcfedc30fc20e6fd71e5 520 Gene3D G3DSA:1.10.510.10 268 382 8.0E-7 T 31-10-2018 DY252_21625 f30ec3be572cbcfedc30fc20e6fd71e5 520 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 9 442 4.6E-174 T 31-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 DY252_01690 dc3ae996a12490c8dd4647b90931ede1 385 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 190 385 37.657 T 31-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DY252_01690 dc3ae996a12490c8dd4647b90931ede1 385 SUPERFAMILY SSF142695 193 362 1.57E-54 T 31-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DY252_01690 dc3ae996a12490c8dd4647b90931ede1 385 Gene3D G3DSA:3.40.50.10990 190 363 3.4E-66 T 31-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DY252_01690 dc3ae996a12490c8dd4647b90931ede1 385 PIRSF PIRSF001259 19 66 3.4 T 31-10-2018 DY252_01690 dc3ae996a12490c8dd4647b90931ede1 385 PIRSF PIRSF001259 135 385 9.6E-73 T 31-10-2018 DY252_01690 dc3ae996a12490c8dd4647b90931ede1 385 Pfam PF00925 GTP cyclohydrolase II 195 361 2.0E-59 T 31-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DY252_01690 dc3ae996a12490c8dd4647b90931ede1 385 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 206 384 1.8E-63 T 31-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DY252_01690 dc3ae996a12490c8dd4647b90931ede1 385 SUPERFAMILY SSF55821 22 181 1.74E-5 T 31-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DY252_05240 2f2f6ae5ba4e1d1221178dfd2b35f537 171 Gene3D G3DSA:1.10.10.10 8 154 4.8E-27 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_05240 2f2f6ae5ba4e1d1221178dfd2b35f537 171 SUPERFAMILY SSF46785 21 153 6.04E-30 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_05240 2f2f6ae5ba4e1d1221178dfd2b35f537 171 ProSitePatterns PS01117 MarR-type HTH domain signature. 78 112 - T 31-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DY252_05240 2f2f6ae5ba4e1d1221178dfd2b35f537 171 SMART SM00347 39 139 2.4E-21 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_05240 2f2f6ae5ba4e1d1221178dfd2b35f537 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 1.1E-8 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_05240 2f2f6ae5ba4e1d1221178dfd2b35f537 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 1.1E-8 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_05240 2f2f6ae5ba4e1d1221178dfd2b35f537 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 1.1E-8 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_05240 2f2f6ae5ba4e1d1221178dfd2b35f537 171 Pfam PF12802 MarR family 47 103 2.7E-13 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_04165 32592bfe708c56e11006216177b907b6 488 SUPERFAMILY SSF53850 131 354 2.46E-35 T 31-10-2018 DY252_04165 32592bfe708c56e11006216177b907b6 488 Gene3D G3DSA:3.40.190.10 134 469 2.7E-109 T 31-10-2018 DY252_04165 32592bfe708c56e11006216177b907b6 488 Pfam PF13379 NMT1-like family 128 365 2.7E-82 T 31-10-2018 DY252_04165 32592bfe708c56e11006216177b907b6 488 Gene3D G3DSA:3.40.190.10 220 474 2.7E-109 T 31-10-2018 DY252_06125 f08e19324fa8c680996765ed24b49342 259 SMART SM00382 30 223 3.7E-11 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_06125 f08e19324fa8c680996765ed24b49342 259 SUPERFAMILY SSF52540 4 233 2.77E-55 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_06125 f08e19324fa8c680996765ed24b49342 259 Pfam PF00005 ABC transporter 22 175 2.1E-27 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_06125 f08e19324fa8c680996765ed24b49342 259 Gene3D G3DSA:3.40.50.300 1 240 2.0E-50 T 31-10-2018 DY252_08950 4ceadf116092d8dfe5f3fa209fec65dc 155 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 31-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_08950 4ceadf116092d8dfe5f3fa209fec65dc 155 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 155 35.828 T 31-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 DY252_08950 4ceadf116092d8dfe5f3fa209fec65dc 155 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 6.6E-68 T 31-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 DY252_08950 4ceadf116092d8dfe5f3fa209fec65dc 155 Pfam PF00177 Ribosomal protein S7p/S5e 1 148 5.8E-66 T 31-10-2018 IPR023798 Ribosomal protein S7 domain DY252_08950 4ceadf116092d8dfe5f3fa209fec65dc 155 PIRSF PIRSF002122 2 155 4.5E-58 T 31-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 DY252_08950 4ceadf116092d8dfe5f3fa209fec65dc 155 SUPERFAMILY SSF47973 3 151 5.62E-59 T 31-10-2018 IPR036823 Ribosomal protein S7 domain superfamily DY252_08950 4ceadf116092d8dfe5f3fa209fec65dc 155 Gene3D G3DSA:1.10.455.10 2 155 4.8E-59 T 31-10-2018 IPR036823 Ribosomal protein S7 domain superfamily DY252_08880 cee3e88765824d75046b84b260d52c10 290 SUPERFAMILY SSF75217 117 289 5.17E-44 T 31-10-2018 IPR029028 Alpha/beta knot methyltransferases DY252_08880 cee3e88765824d75046b84b260d52c10 290 Pfam PF00588 SpoU rRNA Methylase family 146 285 7.2E-38 T 31-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DY252_08880 cee3e88765824d75046b84b260d52c10 290 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 53 289 3.7E-57 T 31-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 DY252_08880 cee3e88765824d75046b84b260d52c10 290 Gene3D G3DSA:3.40.1280.10 128 290 6.5E-52 T 31-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DY252_08880 cee3e88765824d75046b84b260d52c10 290 Gene3D G3DSA:3.30.1330.30 45 125 1.1E-9 T 31-10-2018 IPR029064 50S ribosomal protein L30e-like DY252_08880 cee3e88765824d75046b84b260d52c10 290 SMART SM00967 53 129 1.7E-12 T 31-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DY252_08880 cee3e88765824d75046b84b260d52c10 290 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 53 127 3.2E-13 T 31-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DY252_08880 cee3e88765824d75046b84b260d52c10 290 SUPERFAMILY SSF55315 50 125 2.59E-12 T 31-10-2018 IPR029064 50S ribosomal protein L30e-like DY252_17655 9e3bb4c2fa09d2175e6e55fa23ba6b58 570 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 6 267 6.8E-39 T 31-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DY252_17655 9e3bb4c2fa09d2175e6e55fa23ba6b58 570 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 274 551 2.9E-38 T 31-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DY252_17655 9e3bb4c2fa09d2175e6e55fa23ba6b58 570 SUPERFAMILY SSF117143 85 268 2.35E-21 T 31-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DY252_17655 9e3bb4c2fa09d2175e6e55fa23ba6b58 570 Gene3D G3DSA:2.60.98.20 273 436 1.0E-10 T 31-10-2018 IPR037058 Flagellar hook protein FlgE superfamily DY252_17655 9e3bb4c2fa09d2175e6e55fa23ba6b58 570 Pfam PF07559 Flagellar basal body protein FlaE 320 430 5.1E-11 T 31-10-2018 IPR011491 Flagellar hook protein FlgE DY252_17655 9e3bb4c2fa09d2175e6e55fa23ba6b58 570 Pfam PF00460 Flagella basal body rod protein 10 37 4.7E-9 T 31-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DY252_17655 9e3bb4c2fa09d2175e6e55fa23ba6b58 570 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 31-10-2018 IPR019776 Flagellar basal body rod protein, conserved site DY252_17655 9e3bb4c2fa09d2175e6e55fa23ba6b58 570 SUPERFAMILY SSF117143 267 530 2.35E-32 T 31-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DY252_17655 9e3bb4c2fa09d2175e6e55fa23ba6b58 570 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 492 567 7.5E-20 T 31-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DY252_16835 a554a4be3d2bafa3312c3f8955d0a776 294 Gene3D G3DSA:1.10.1040.10 168 294 1.8E-34 T 31-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DY252_16835 a554a4be3d2bafa3312c3f8955d0a776 294 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 167 4.6E-48 T 31-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DY252_16835 a554a4be3d2bafa3312c3f8955d0a776 294 SUPERFAMILY SSF48179 170 293 3.17E-31 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_16835 a554a4be3d2bafa3312c3f8955d0a776 294 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 171 291 1.1E-28 T 31-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DY252_16835 a554a4be3d2bafa3312c3f8955d0a776 294 SUPERFAMILY SSF51735 8 169 9.73E-48 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_16835 a554a4be3d2bafa3312c3f8955d0a776 294 PIRSF PIRSF000103 3 294 1.3E-77 T 31-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DY252_16835 a554a4be3d2bafa3312c3f8955d0a776 294 Gene3D G3DSA:3.40.50.720 5 167 5.2E-55 T 31-10-2018 DY252_16835 a554a4be3d2bafa3312c3f8955d0a776 294 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 11 24 - T 31-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 DY252_03040 8ac46e40876d05765a51f8ff05ea9d14 439 Pfam PF07804 HipA-like C-terminal domain 155 402 1.2E-50 T 31-10-2018 IPR012893 HipA-like, C-terminal DY252_03040 8ac46e40876d05765a51f8ff05ea9d14 439 Pfam PF13657 HipA N-terminal domain 10 109 8.3E-25 T 31-10-2018 IPR017508 HipA, N-terminal subdomain 1 DY252_03040 8ac46e40876d05765a51f8ff05ea9d14 439 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 10 109 2.4E-27 T 31-10-2018 IPR017508 HipA, N-terminal subdomain 1 DY252_06020 cdfd05b8aa09bf45b4d930b4388215b7 358 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 160 224 2.0E-4 T 31-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DY252_06020 cdfd05b8aa09bf45b4d930b4388215b7 358 Gene3D G3DSA:3.30.360.10 147 358 7.0E-49 T 31-10-2018 DY252_06020 cdfd05b8aa09bf45b4d930b4388215b7 358 SUPERFAMILY SSF51735 26 180 2.46E-45 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_06020 cdfd05b8aa09bf45b4d930b4388215b7 358 SUPERFAMILY SSF55347 153 324 3.11E-36 T 31-10-2018 DY252_06020 cdfd05b8aa09bf45b4d930b4388215b7 358 Gene3D G3DSA:3.40.50.720 17 144 5.5E-32 T 31-10-2018 DY252_06020 cdfd05b8aa09bf45b4d930b4388215b7 358 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 31 137 1.4E-18 T 31-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DY252_19580 7f7eda56753ac891b3ebbb7744bd1351 193 PIRSF PIRSF029557 2 193 2.9E-62 T 31-10-2018 IPR010707 Protein of unknown function DUF1285 DY252_19580 7f7eda56753ac891b3ebbb7744bd1351 193 Gene3D G3DSA:3.10.540.10 2 88 4.5E-26 T 31-10-2018 DY252_19580 7f7eda56753ac891b3ebbb7744bd1351 193 Pfam PF06938 Protein of unknown function (DUF1285) 37 184 4.6E-55 T 31-10-2018 IPR010707 Protein of unknown function DUF1285 DY252_19580 7f7eda56753ac891b3ebbb7744bd1351 193 Gene3D G3DSA:2.30.270.10 89 158 2.3E-30 T 31-10-2018 IPR023361 DUF1285, beta-roll domain superfamily DY252_01535 557c7dc96ee9f32b35c31d1aca77be47 194 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 192 23.823 T 31-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DY252_01535 557c7dc96ee9f32b35c31d1aca77be47 194 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 173 2.0E-37 T 31-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DY252_01535 557c7dc96ee9f32b35c31d1aca77be47 194 Gene3D G3DSA:3.40.50.300 1 194 7.3E-57 T 31-10-2018 DY252_01535 557c7dc96ee9f32b35c31d1aca77be47 194 SUPERFAMILY SSF52540 1 193 2.5E-29 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_01535 557c7dc96ee9f32b35c31d1aca77be47 194 Pfam PF01121 Dephospho-CoA kinase 3 173 4.6E-43 T 31-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DY252_03990 044d8b502caa8b4baac47f985c89d84b 645 SUPERFAMILY SSF47781 557 643 1.27E-21 T 31-10-2018 IPR010994 RuvA domain 2-like DY252_03990 044d8b502caa8b4baac47f985c89d84b 645 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 41 620 1.9E-174 T 31-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 DY252_03990 044d8b502caa8b4baac47f985c89d84b 645 SMART SM00278 621 640 1.8 T 31-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DY252_03990 044d8b502caa8b4baac47f985c89d84b 645 SMART SM00278 589 608 130.0 T 31-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DY252_03990 044d8b502caa8b4baac47f985c89d84b 645 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 415 575 1.2E-50 T 31-10-2018 IPR001162 UvrC family homology region DY252_03990 044d8b502caa8b4baac47f985c89d84b 645 SUPERFAMILY SSF46600 223 276 5.1E-13 T 31-10-2018 IPR036876 UVR domain superfamily DY252_03990 044d8b502caa8b4baac47f985c89d84b 645 Gene3D G3DSA:3.30.420.340 407 582 2.7E-48 T 31-10-2018 IPR038476 UvrC homology region 2 superfamily DY252_03990 044d8b502caa8b4baac47f985c89d84b 645 Gene3D G3DSA:3.40.1440.10 37 135 5.8E-31 T 31-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DY252_03990 044d8b502caa8b4baac47f985c89d84b 645 Gene3D G3DSA:1.10.150.20 583 641 6.4E-19 T 31-10-2018 DY252_03990 044d8b502caa8b4baac47f985c89d84b 645 Gene3D G3DSA:4.10.860.10 233 274 2.9E-6 T 31-10-2018 DY252_03990 044d8b502caa8b4baac47f985c89d84b 645 SUPERFAMILY SSF82771 50 133 1.7E-20 T 31-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DY252_03990 044d8b502caa8b4baac47f985c89d84b 645 Pfam PF01541 GIY-YIG catalytic domain 52 126 8.4E-8 T 31-10-2018 IPR000305 GIY-YIG endonuclease DY252_03990 044d8b502caa8b4baac47f985c89d84b 645 Hamap MF_00203 UvrABC system protein C [uvrC]. 37 640 27.542 T 31-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 DY252_03990 044d8b502caa8b4baac47f985c89d84b 645 Pfam PF02151 UvrB/uvrC motif 238 271 2.0E-7 T 31-10-2018 IPR001943 UVR domain GO:0005515 DY252_03990 044d8b502caa8b4baac47f985c89d84b 645 SMART SM00465 50 131 6.8E-18 T 31-10-2018 IPR000305 GIY-YIG endonuclease DY252_21665 bc063c25a9cabe7ef40709c7182d9cd0 250 Pfam PF10615 Protein of unknown function (DUF2470) 172 244 9.8E-18 T 31-10-2018 IPR019595 Domain of unknown function DUF2470 DY252_21665 bc063c25a9cabe7ef40709c7182d9cd0 250 Gene3D G3DSA:3.20.180.10 160 247 1.9E-23 T 31-10-2018 IPR037119 Haem oxygenase HugZ-like superfamily DY252_21665 bc063c25a9cabe7ef40709c7182d9cd0 250 Gene3D G3DSA:2.30.110.10 2 158 1.6E-37 T 31-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DY252_21665 bc063c25a9cabe7ef40709c7182d9cd0 250 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 6 153 2.5E-15 T 31-10-2018 DY252_21665 bc063c25a9cabe7ef40709c7182d9cd0 250 SUPERFAMILY SSF50475 11 249 8.61E-44 T 31-10-2018 DY252_20700 152e05b829490dc1b6889b29d614cdf2 311 Gene3D G3DSA:3.40.50.620 2 183 9.0E-48 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_20700 152e05b829490dc1b6889b29d614cdf2 311 SUPERFAMILY SSF52402 3 167 3.77E-48 T 31-10-2018 DY252_20700 152e05b829490dc1b6889b29d614cdf2 311 Pfam PF01012 Electron transfer flavoprotein domain 4 168 7.1E-33 T 31-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DY252_20700 152e05b829490dc1b6889b29d614cdf2 311 SUPERFAMILY SSF52467 190 310 1.83E-46 T 31-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DY252_20700 152e05b829490dc1b6889b29d614cdf2 311 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 191 274 8.7E-35 T 31-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 DY252_20700 152e05b829490dc1b6889b29d614cdf2 311 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 255 281 - T 31-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 DY252_20700 152e05b829490dc1b6889b29d614cdf2 311 PIRSF PIRSF000089 1 311 2.9E-103 T 31-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 DY252_20700 152e05b829490dc1b6889b29d614cdf2 311 SMART SM00893 3 183 1.9E-43 T 31-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DY252_20700 152e05b829490dc1b6889b29d614cdf2 311 Gene3D G3DSA:3.40.50.1220 185 311 2.2E-56 T 31-10-2018 DY252_19055 db63e980ed609370f52eedae14868b6b 921 Gene3D G3DSA:1.20.1730.10 39 484 2.1E-15 T 31-10-2018 IPR038377 Sodium/glucose symporter superfamily DY252_19055 db63e980ed609370f52eedae14868b6b 921 Gene3D G3DSA:3.30.565.10 752 908 2.8E-35 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_19055 db63e980ed609370f52eedae14868b6b 921 SMART SM00387 792 907 3.2E-31 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_19055 db63e980ed609370f52eedae14868b6b 921 Gene3D G3DSA:1.10.287.130 643 744 1.2E-25 T 31-10-2018 DY252_19055 db63e980ed609370f52eedae14868b6b 921 SUPERFAMILY SSF55874 735 908 4.06E-39 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_19055 db63e980ed609370f52eedae14868b6b 921 PRINTS PR00344 Bacterial sensor protein C-terminal signature 830 844 1.4E-11 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_19055 db63e980ed609370f52eedae14868b6b 921 PRINTS PR00344 Bacterial sensor protein C-terminal signature 891 904 1.4E-11 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_19055 db63e980ed609370f52eedae14868b6b 921 PRINTS PR00344 Bacterial sensor protein C-terminal signature 867 885 1.4E-11 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_19055 db63e980ed609370f52eedae14868b6b 921 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 793 905 4.3E-24 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_19055 db63e980ed609370f52eedae14868b6b 921 SMART SM00388 679 746 1.9E-22 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_19055 db63e980ed609370f52eedae14868b6b 921 SUPERFAMILY SSF47384 664 746 4.12E-22 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_19055 db63e980ed609370f52eedae14868b6b 921 Pfam PF00512 His Kinase A (phospho-acceptor) domain 680 746 2.6E-17 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_17560 a6eb5f57e3af8246cd0d6041db70e3ee 257 PRINTS PR01008 Flagellar L-ring protein signature 197 213 1.1E-23 T 31-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DY252_17560 a6eb5f57e3af8246cd0d6041db70e3ee 257 PRINTS PR01008 Flagellar L-ring protein signature 218 232 1.1E-23 T 31-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DY252_17560 a6eb5f57e3af8246cd0d6041db70e3ee 257 PRINTS PR01008 Flagellar L-ring protein signature 92 104 1.1E-23 T 31-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DY252_17560 a6eb5f57e3af8246cd0d6041db70e3ee 257 PRINTS PR01008 Flagellar L-ring protein signature 171 186 1.1E-23 T 31-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DY252_17560 a6eb5f57e3af8246cd0d6041db70e3ee 257 PRINTS PR01008 Flagellar L-ring protein signature 234 248 1.1E-23 T 31-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DY252_17560 a6eb5f57e3af8246cd0d6041db70e3ee 257 Hamap MF_00415 Flagellar L-ring protein [flgH]. 10 255 24.214 T 31-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DY252_17560 a6eb5f57e3af8246cd0d6041db70e3ee 257 Pfam PF02107 Flagellar L-ring protein 71 256 4.5E-52 T 31-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DY252_11300 64b804c62c6b0b3184258067430fda80 167 SUPERFAMILY SSF52402 17 124 6.98E-13 T 31-10-2018 DY252_11300 64b804c62c6b0b3184258067430fda80 167 Gene3D G3DSA:3.40.50.620 13 155 8.3E-13 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_11300 64b804c62c6b0b3184258067430fda80 167 Pfam PF00582 Universal stress protein family 15 129 1.4E-13 T 31-10-2018 IPR006016 UspA DY252_00070 ec36fb89d96e811ea8ca4db90524161b 483 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 19 178 6.2E-40 T 31-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_00070 ec36fb89d96e811ea8ca4db90524161b 483 Gene3D G3DSA:1.10.1040.10 272 482 7.2E-55 T 31-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DY252_00070 ec36fb89d96e811ea8ca4db90524161b 483 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 208 220 - T 31-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DY252_00070 ec36fb89d96e811ea8ca4db90524161b 483 SUPERFAMILY SSF48179 273 479 9.86E-46 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_00070 ec36fb89d96e811ea8ca4db90524161b 483 PRINTS PR00084 Mannitol dehydrogenase signature 169 182 5.8E-21 T 31-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DY252_00070 ec36fb89d96e811ea8ca4db90524161b 483 PRINTS PR00084 Mannitol dehydrogenase signature 208 221 5.8E-21 T 31-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DY252_00070 ec36fb89d96e811ea8ca4db90524161b 483 PRINTS PR00084 Mannitol dehydrogenase signature 238 253 5.8E-21 T 31-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DY252_00070 ec36fb89d96e811ea8ca4db90524161b 483 PRINTS PR00084 Mannitol dehydrogenase signature 20 30 5.8E-21 T 31-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DY252_00070 ec36fb89d96e811ea8ca4db90524161b 483 Gene3D G3DSA:3.40.50.720 5 271 1.2E-94 T 31-10-2018 DY252_00070 ec36fb89d96e811ea8ca4db90524161b 483 SUPERFAMILY SSF51735 12 271 8.27E-86 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_00070 ec36fb89d96e811ea8ca4db90524161b 483 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 206 444 2.8E-69 T 31-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 DY252_16805 fd912fe6ceecdb2f33e131871298c226 299 Gene3D G3DSA:3.40.190.10 166 266 6.0E-31 T 31-10-2018 DY252_16805 fd912fe6ceecdb2f33e131871298c226 299 SUPERFAMILY SSF46785 9 89 3.16E-18 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_16805 fd912fe6ceecdb2f33e131871298c226 299 Gene3D G3DSA:1.10.10.10 11 97 3.4E-20 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_16805 fd912fe6ceecdb2f33e131871298c226 299 Pfam PF03466 LysR substrate binding domain 99 294 5.9E-19 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_16805 fd912fe6ceecdb2f33e131871298c226 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 71 1.1E-17 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_16805 fd912fe6ceecdb2f33e131871298c226 299 SUPERFAMILY SSF53850 99 296 7.24E-21 T 31-10-2018 DY252_16805 fd912fe6ceecdb2f33e131871298c226 299 Gene3D G3DSA:3.40.190.10 113 288 6.0E-31 T 31-10-2018 DY252_07195 fdb9543cb1debaf174aa22d6dcb4e615 85 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 31-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 DY252_07195 fdb9543cb1debaf174aa22d6dcb4e615 85 Gene3D G3DSA:3.40.30.10 1 84 2.2E-28 T 31-10-2018 DY252_07195 fdb9543cb1debaf174aa22d6dcb4e615 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 3.4E-33 T 31-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 DY252_07195 fdb9543cb1debaf174aa22d6dcb4e615 85 Pfam PF00462 Glutaredoxin 4 64 5.1E-22 T 31-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DY252_07195 fdb9543cb1debaf174aa22d6dcb4e615 85 PRINTS PR00160 Glutaredoxin signature 4 22 1.7E-16 T 31-10-2018 IPR014025 Glutaredoxin subgroup DY252_07195 fdb9543cb1debaf174aa22d6dcb4e615 85 PRINTS PR00160 Glutaredoxin signature 47 60 1.7E-16 T 31-10-2018 IPR014025 Glutaredoxin subgroup DY252_07195 fdb9543cb1debaf174aa22d6dcb4e615 85 PRINTS PR00160 Glutaredoxin signature 61 74 1.7E-16 T 31-10-2018 IPR014025 Glutaredoxin subgroup DY252_07195 fdb9543cb1debaf174aa22d6dcb4e615 85 SUPERFAMILY SSF52833 1 84 5.17E-28 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_08225 d438ef95aa91d8c516c539193e5886a5 406 Gene3D G3DSA:3.40.50.1820 98 311 4.0E-35 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_08225 d438ef95aa91d8c516c539193e5886a5 406 SUPERFAMILY SSF53474 102 307 8.92E-28 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_08225 d438ef95aa91d8c516c539193e5886a5 406 Pfam PF12146 Serine aminopeptidase, S33 104 223 1.1E-11 T 31-10-2018 IPR022742 Serine aminopeptidase, S33 DY252_13590 65d0fa9bcc624b93270cd356495bc9c2 163 TIGRFAM TIGR00754 bfr: bacterioferritin 1 153 1.8E-44 T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13590 65d0fa9bcc624b93270cd356495bc9c2 163 Pfam PF00210 Ferritin-like domain 9 145 5.9E-37 T 31-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DY252_13590 65d0fa9bcc624b93270cd356495bc9c2 163 PRINTS PR00601 Bacterioferritin signature 107 127 1.7E-42 T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13590 65d0fa9bcc624b93270cd356495bc9c2 163 PRINTS PR00601 Bacterioferritin signature 44 64 1.7E-42 T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13590 65d0fa9bcc624b93270cd356495bc9c2 163 PRINTS PR00601 Bacterioferritin signature 129 150 1.7E-42 T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13590 65d0fa9bcc624b93270cd356495bc9c2 163 PRINTS PR00601 Bacterioferritin signature 23 43 1.7E-42 T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13590 65d0fa9bcc624b93270cd356495bc9c2 163 PRINTS PR00601 Bacterioferritin signature 3 22 1.7E-42 T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13590 65d0fa9bcc624b93270cd356495bc9c2 163 PRINTS PR00601 Bacterioferritin signature 86 106 1.7E-42 T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13590 65d0fa9bcc624b93270cd356495bc9c2 163 PRINTS PR00601 Bacterioferritin signature 65 85 1.7E-42 T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13590 65d0fa9bcc624b93270cd356495bc9c2 163 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13590 65d0fa9bcc624b93270cd356495bc9c2 163 Gene3D G3DSA:1.20.1260.10 1 154 9.4E-56 T 31-10-2018 IPR012347 Ferritin-like DY252_13590 65d0fa9bcc624b93270cd356495bc9c2 163 PIRSF PIRSF002560 1 158 2.9E-57 T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13590 65d0fa9bcc624b93270cd356495bc9c2 163 SUPERFAMILY SSF47240 1 156 1.8E-46 T 31-10-2018 IPR009078 Ferritin-like superfamily DY252_06990 d39648ce1dbbf4f730222331417bda4d 339 SUPERFAMILY SSF51735 1 183 6.93E-75 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_06990 d39648ce1dbbf4f730222331417bda4d 339 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 178 2.4E-74 T 31-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DY252_06990 d39648ce1dbbf4f730222331417bda4d 339 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 329 45.74 T 31-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DY252_06990 d39648ce1dbbf4f730222331417bda4d 339 SUPERFAMILY SSF48179 184 333 1.22E-71 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_06990 d39648ce1dbbf4f730222331417bda4d 339 Gene3D G3DSA:3.40.50.720 1 182 1.2E-75 T 31-10-2018 DY252_06990 d39648ce1dbbf4f730222331417bda4d 339 PIRSF PIRSF000116 4 206 5.1E-44 T 31-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DY252_06990 d39648ce1dbbf4f730222331417bda4d 339 PIRSF PIRSF000116 202 332 2.1E-13 T 31-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DY252_06990 d39648ce1dbbf4f730222331417bda4d 339 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 327 6.7E-132 T 31-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DY252_06990 d39648ce1dbbf4f730222331417bda4d 339 Gene3D G3DSA:1.10.3730.40 183 339 7.3E-74 T 31-10-2018 DY252_06990 d39648ce1dbbf4f730222331417bda4d 339 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 4.6E-66 T 31-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DY252_15600 2b3d96e6f4f4ff8db5c9c9702faba988 184 SUPERFAMILY SSF52540 9 182 5.11E-20 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_15600 2b3d96e6f4f4ff8db5c9c9702faba988 184 Gene3D G3DSA:3.40.50.300 8 179 3.3E-9 T 31-10-2018 DY252_15600 2b3d96e6f4f4ff8db5c9c9702faba988 184 Pfam PF13521 AAA domain 10 174 4.1E-42 T 31-10-2018 IPR038727 NadR/Ttd14, AAA domain DY252_14995 f9b5d80ab0a8680065fda7d230e5afc9 295 SUPERFAMILY SSF53448 3 270 3.83E-63 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_14995 f9b5d80ab0a8680065fda7d230e5afc9 295 Gene3D G3DSA:3.90.550.10 1 289 2.0E-87 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_14995 f9b5d80ab0a8680065fda7d230e5afc9 295 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 266 1.2E-110 T 31-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 DY252_14995 f9b5d80ab0a8680065fda7d230e5afc9 295 Pfam PF00483 Nucleotidyl transferase 12 268 1.7E-27 T 31-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DY252_11830 aa25e0ced09957a93f1703e703a82d09 137 Gene3D G3DSA:3.40.140.10 2 137 7.8E-46 T 31-10-2018 DY252_11830 aa25e0ced09957a93f1703e703a82d09 137 SUPERFAMILY SSF53927 10 136 2.26E-41 T 31-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DY252_11830 aa25e0ced09957a93f1703e703a82d09 137 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 10 135 5.5E-40 T 31-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 DY252_11830 aa25e0ced09957a93f1703e703a82d09 137 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 58 98 - T 31-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DY252_11830 aa25e0ced09957a93f1703e703a82d09 137 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 9 82 6.1E-14 T 31-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 DY252_16000 67686939e45f898cc38c64f78d330859 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 31-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DY252_16000 67686939e45f898cc38c64f78d330859 486 Gene3D G3DSA:3.40.309.10 262 451 5.9E-185 T 31-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DY252_16000 67686939e45f898cc38c64f78d330859 486 Gene3D G3DSA:3.40.605.10 20 474 5.9E-185 T 31-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_16000 67686939e45f898cc38c64f78d330859 486 Pfam PF00171 Aldehyde dehydrogenase family 20 479 8.5E-172 T 31-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DY252_16000 67686939e45f898cc38c64f78d330859 486 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 477 2.3E-219 T 31-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 DY252_16000 67686939e45f898cc38c64f78d330859 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 31-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DY252_16000 67686939e45f898cc38c64f78d330859 486 SUPERFAMILY SSF53720 6 482 2.36E-174 T 31-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DY252_01505 e2e5eb580655e92643697dd10b4a437e 142 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 4 142 4.8E-49 T 31-10-2018 IPR005265 Uncharacterised protein family UPF0093 DY252_01505 e2e5eb580655e92643697dd10b4a437e 142 PIRSF PIRSF004638 1 142 4.0E-58 T 31-10-2018 IPR005265 Uncharacterised protein family UPF0093 DY252_01505 e2e5eb580655e92643697dd10b4a437e 142 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 142 8.3E-60 T 31-10-2018 IPR005265 Uncharacterised protein family UPF0093 DY252_07945 159de2358a4b79e7162679307a213c2e 154 Gene3D G3DSA:3.40.30.10 73 153 2.1E-21 T 31-10-2018 DY252_07945 159de2358a4b79e7162679307a213c2e 154 SUPERFAMILY SSF52833 11 152 6.26E-45 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_07945 159de2358a4b79e7162679307a213c2e 154 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 21 150 9.6E-42 T 31-10-2018 DY252_07945 159de2358a4b79e7162679307a213c2e 154 PIRSF PIRSF000216 1 154 4.3E-45 T 31-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_07945 159de2358a4b79e7162679307a213c2e 154 Gene3D G3DSA:1.10.10.1590 3 72 9.2E-15 T 31-10-2018 DY252_17315 ca0814e57a3c89e14138e204d2ccc256 280 SUPERFAMILY SSF48452 105 255 1.31E-13 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_17315 ca0814e57a3c89e14138e204d2ccc256 280 SUPERFAMILY SSF48452 3 156 3.79E-23 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_17315 ca0814e57a3c89e14138e204d2ccc256 280 Pfam PF14559 Tetratricopeptide repeat 81 146 8.6E-6 T 31-10-2018 DY252_17315 ca0814e57a3c89e14138e204d2ccc256 280 Pfam PF14559 Tetratricopeptide repeat 13 69 1.2E-8 T 31-10-2018 DY252_17315 ca0814e57a3c89e14138e204d2ccc256 280 SMART SM00028 3 36 2.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_17315 ca0814e57a3c89e14138e204d2ccc256 280 SMART SM00028 37 70 90.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_17315 ca0814e57a3c89e14138e204d2ccc256 280 SMART SM00028 71 104 270.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_17315 ca0814e57a3c89e14138e204d2ccc256 280 SMART SM00028 105 138 0.31 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_17315 ca0814e57a3c89e14138e204d2ccc256 280 SMART SM00028 173 206 60.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_17315 ca0814e57a3c89e14138e204d2ccc256 280 SMART SM00028 139 172 67.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_17315 ca0814e57a3c89e14138e204d2ccc256 280 Gene3D G3DSA:1.25.40.10 1 278 1.6E-38 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_02025 a61fd2364bdabe92a72f3bc902425412 282 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 22 276 35.726 T 31-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DY252_02025 a61fd2364bdabe92a72f3bc902425412 282 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 56 69 - T 31-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DY252_02025 a61fd2364bdabe92a72f3bc902425412 282 Pfam PF00290 Tryptophan synthase alpha chain 16 267 6.8E-96 T 31-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DY252_02025 a61fd2364bdabe92a72f3bc902425412 282 Gene3D G3DSA:3.20.20.70 7 277 7.7E-101 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_02025 a61fd2364bdabe92a72f3bc902425412 282 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 16 269 1.5E-81 T 31-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DY252_02025 a61fd2364bdabe92a72f3bc902425412 282 SUPERFAMILY SSF51366 10 264 7.91E-91 T 31-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 SUPERFAMILY SSF55874 291 473 2.1E-37 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 SUPERFAMILY SSF47226 1 124 3.66E-30 T 31-10-2018 IPR036641 HPT domain superfamily GO:0000160 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 Pfam PF01584 CheW-like domain 480 614 1.3E-22 T 31-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 Pfam PF01584 CheW-like domain 643 729 1.6E-5 T 31-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 Gene3D G3DSA:3.30.565.10 288 474 4.1E-56 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 SMART SM01231 227 287 4.6E-18 T 31-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 SUPERFAMILY SSF50341 640 758 2.88E-13 T 31-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 SUPERFAMILY SSF52172 779 898 2.85E-30 T 31-10-2018 IPR011006 CheY-like superfamily DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 SMART SM00448 781 894 2.3E-28 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 SMART SM00260 467 613 4.4E-37 T 31-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 Pfam PF00072 Response regulator receiver domain 783 893 2.4E-21 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 Pfam PF01627 Hpt domain 3 94 8.5E-16 T 31-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 SMART SM00073 1 98 1.4E-29 T 31-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 335 474 2.0E-16 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 Gene3D G3DSA:2.40.50.180 498 568 1.8E-37 T 31-10-2018 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 Gene3D G3DSA:1.10.287.560 227 287 5.0E-18 T 31-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 Gene3D G3DSA:2.30.30.40 475 608 1.8E-37 T 31-10-2018 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 453 5.1E-12 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 5.1E-12 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 472 5.1E-12 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 Gene3D G3DSA:3.40.50.2300 772 900 5.7E-30 T 31-10-2018 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 Gene3D G3DSA:1.20.120.160 1 137 1.7E-33 T 31-10-2018 IPR036641 HPT domain superfamily GO:0000160 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 228 287 1.1E-13 T 31-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 SUPERFAMILY SSF50341 474 612 1.57E-29 T 31-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 SMART SM00387 332 475 5.1E-23 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_17785 bcb71c5a9e6948bb457d80ebab3846a3 901 SUPERFAMILY SSF47384 228 288 4.32E-14 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_08130 6748965fc3d8cb4ab0825b0885651702 255 Gene3D G3DSA:3.40.50.10330 5 102 1.8E-12 T 31-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DY252_08130 6748965fc3d8cb4ab0825b0885651702 255 Gene3D G3DSA:2.60.200.30 103 230 2.2E-23 T 31-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DY252_08130 6748965fc3d8cb4ab0825b0885651702 255 Hamap MF_00361 NAD kinase [nadK]. 4 255 19.986 T 31-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DY252_08130 6748965fc3d8cb4ab0825b0885651702 255 SUPERFAMILY SSF111331 19 241 4.06E-54 T 31-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DY252_08130 6748965fc3d8cb4ab0825b0885651702 255 Pfam PF01513 ATP-NAD kinase 23 181 2.8E-17 T 31-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DY252_07990 f7335e9afb7fc82e9cc73726972663bc 504 SUPERFAMILY SSF53720 26 496 3.27E-102 T 31-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DY252_07990 f7335e9afb7fc82e9cc73726972663bc 504 Gene3D G3DSA:3.40.309.10 266 452 2.7E-199 T 31-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DY252_07990 f7335e9afb7fc82e9cc73726972663bc 504 Pfam PF00171 Aldehyde dehydrogenase family 29 464 1.6E-44 T 31-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DY252_07990 f7335e9afb7fc82e9cc73726972663bc 504 Gene3D G3DSA:3.40.605.10 42 502 2.7E-199 T 31-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_10655 75ed0e7b3e4311b3fb1367820a1d1c43 142 Gene3D G3DSA:3.10.129.10 7 141 1.7E-37 T 31-10-2018 DY252_10655 75ed0e7b3e4311b3fb1367820a1d1c43 142 SUPERFAMILY SSF54637 15 136 1.25E-37 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_10655 75ed0e7b3e4311b3fb1367820a1d1c43 142 Pfam PF03061 Thioesterase superfamily 35 102 1.4E-16 T 31-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DY252_17970 0048b0a68d6edb616c1fbcb2eb771c47 345 SUPERFAMILY SSF47413 9 67 3.19E-16 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_17970 0048b0a68d6edb616c1fbcb2eb771c47 345 Gene3D G3DSA:3.40.50.2300 165 298 1.2E-69 T 31-10-2018 DY252_17970 0048b0a68d6edb616c1fbcb2eb771c47 345 SMART SM00354 9 79 1.6E-25 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_17970 0048b0a68d6edb616c1fbcb2eb771c47 345 Gene3D G3DSA:1.10.260.40 1 67 4.0E-21 T 31-10-2018 DY252_17970 0048b0a68d6edb616c1fbcb2eb771c47 345 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 31-10-2018 DY252_17970 0048b0a68d6edb616c1fbcb2eb771c47 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 55 8.7E-17 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_17970 0048b0a68d6edb616c1fbcb2eb771c47 345 Pfam PF13377 Periplasmic binding protein-like domain 178 337 3.0E-33 T 31-10-2018 DY252_17970 0048b0a68d6edb616c1fbcb2eb771c47 345 SUPERFAMILY SSF53822 67 334 8.25E-58 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_17970 0048b0a68d6edb616c1fbcb2eb771c47 345 Gene3D G3DSA:3.40.50.2300 71 311 1.2E-69 T 31-10-2018 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.1E-82 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.1E-82 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 PRINTS PR00301 70kDa heat shock protein signature 464 480 2.1E-82 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.1E-82 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 PRINTS PR00301 70kDa heat shock protein signature 197 207 2.1E-82 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 PRINTS PR00301 70kDa heat shock protein signature 138 158 2.1E-82 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 PRINTS PR00301 70kDa heat shock protein signature 383 402 2.1E-82 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.1E-82 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.1E-82 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 Gene3D G3DSA:3.90.640.10 223 310 1.6E-165 T 31-10-2018 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 Gene3D G3DSA:2.60.34.10 378 518 5.9E-67 T 31-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 31-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 31-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 SUPERFAMILY SSF100920 379 535 1.02E-63 T 31-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 SUPERFAMILY SSF53067 186 377 8.64E-68 T 31-10-2018 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 SUPERFAMILY SSF53067 4 184 1.47E-66 T 31-10-2018 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 Gene3D G3DSA:3.30.30.30 67 118 1.6E-165 T 31-10-2018 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 31-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 Gene3D G3DSA:3.30.420.40 184 357 1.6E-165 T 31-10-2018 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 SUPERFAMILY SSF100934 502 610 1.19E-21 T 31-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 Pfam PF00012 Hsp70 protein 4 599 6.4E-280 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 599 2.7E-300 T 31-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 631 37.971 T 31-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 Gene3D G3DSA:1.20.1270.10 519 602 3.1E-27 T 31-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DY252_01980 9a1158590fb66921d1091f7db252ca3a 638 Gene3D G3DSA:3.30.420.40 5 372 1.6E-165 T 31-10-2018 DY252_08365 d511cbb09075812ff82ac22ee0fee11d 118 Gene3D G3DSA:3.30.1460.30 5 107 1.5E-33 T 31-10-2018 DY252_08365 d511cbb09075812ff82ac22ee0fee11d 118 Pfam PF04993 TfoX N-terminal domain 14 105 6.9E-29 T 31-10-2018 IPR007076 TfoX, N-terminal DY252_08365 d511cbb09075812ff82ac22ee0fee11d 118 SUPERFAMILY SSF159894 7 106 8.63E-29 T 31-10-2018 DY252_15190 7de23feadcd586fb9fbddfdc1ee6049e 728 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 2 721 16.457 T 31-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 DY252_15190 7de23feadcd586fb9fbddfdc1ee6049e 728 Pfam PF04453 Organic solvent tolerance protein 297 659 2.7E-55 T 31-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 DY252_17565 f664ec1d5f54e3fd091d01b8aef71f98 138 SUPERFAMILY SSF109635 2 96 1.05E-33 T 31-10-2018 IPR037187 DksA, N-terminal domain superfamily DY252_17565 f664ec1d5f54e3fd091d01b8aef71f98 138 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 18 127 5.3E-44 T 31-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 DY252_17565 f664ec1d5f54e3fd091d01b8aef71f98 138 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 14 136 28.759 T 31-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 DY252_17565 f664ec1d5f54e3fd091d01b8aef71f98 138 Gene3D G3DSA:1.20.120.910 7 137 3.0E-38 T 31-10-2018 DY252_17565 f664ec1d5f54e3fd091d01b8aef71f98 138 SUPERFAMILY SSF57716 97 134 7.41E-9 T 31-10-2018 DY252_17565 f664ec1d5f54e3fd091d01b8aef71f98 138 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 100 124 - T 31-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DY252_17565 f664ec1d5f54e3fd091d01b8aef71f98 138 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 95 130 2.0E-11 T 31-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 Pfam PF00403 Heavy-metal-associated domain 86 145 1.3E-6 T 31-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 Gene3D G3DSA:3.40.50.1000 481 732 2.1E-57 T 31-10-2018 IPR023214 HAD superfamily DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 SUPERFAMILY SSF55008 79 151 1.17E-14 T 31-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 SUPERFAMILY SSF81665 259 493 5.62E-13 T 31-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 Gene3D G3DSA:2.70.150.20 287 403 1.2E-27 T 31-10-2018 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 681 700 1.0E-16 T 31-10-2018 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 628 638 1.0E-16 T 31-10-2018 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 500 514 1.0E-16 T 31-10-2018 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 716 1.0E-16 T 31-10-2018 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 349 363 1.0E-16 T 31-10-2018 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 271 763 2.2E-65 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 Pfam PF00122 E1-E2 ATPase 299 479 1.2E-45 T 31-10-2018 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 219 783 9.3E-153 T 31-10-2018 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 SUPERFAMILY SSF81653 305 399 3.66E-20 T 31-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 502 508 - T 31-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 8 74 1.7E-9 T 31-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 SUPERFAMILY SSF81660 502 579 1.05E-11 T 31-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 Gene3D G3DSA:3.40.1110.10 511 613 2.1E-57 T 31-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 Gene3D G3DSA:3.30.70.100 80 148 1.6E-11 T 31-10-2018 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 SUPERFAMILY SSF56784 499 781 2.86E-39 T 31-10-2018 IPR036412 HAD-like superfamily DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 Pfam PF00702 haloacid dehalogenase-like hydrolase 496 694 2.0E-24 T 31-10-2018 DY252_19920 dd7ce03509ce8f0049f6f4f5c4db03b3 807 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 237 783 4.2E-151 T 31-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DY252_13415 b358791e43ae4ca709625ae85aac9149 554 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 8 545 1.8E-124 T 31-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 DY252_13415 b358791e43ae4ca709625ae85aac9149 554 SUPERFAMILY SSF56281 8 420 3.43E-85 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_13415 b358791e43ae4ca709625ae85aac9149 554 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 358 399 6.0E-8 T 31-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain DY252_13415 b358791e43ae4ca709625ae85aac9149 554 Gene3D G3DSA:3.40.50.10710 205 355 6.5E-162 T 31-10-2018 DY252_13415 b358791e43ae4ca709625ae85aac9149 554 Gene3D G3DSA:3.60.15.10 8 431 6.5E-162 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_13415 b358791e43ae4ca709625ae85aac9149 554 Pfam PF12706 Beta-lactamase superfamily domain 46 172 1.6E-9 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_13415 b358791e43ae4ca709625ae85aac9149 554 SMART SM00849 18 220 1.6E-20 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_04595 7f7426306bc8bf631488e522f9d9b9d1 260 Gene3D G3DSA:3.10.129.10 15 252 9.2E-57 T 31-10-2018 DY252_04595 7f7426306bc8bf631488e522f9d9b9d1 260 SUPERFAMILY SSF54637 165 252 2.89E-11 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_04595 7f7426306bc8bf631488e522f9d9b9d1 260 Pfam PF01643 Acyl-ACP thioesterase 20 237 4.0E-37 T 31-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 DY252_04595 7f7426306bc8bf631488e522f9d9b9d1 260 SUPERFAMILY SSF54637 21 146 5.98E-33 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_17580 88260b790d15bf82a2e73d1144284a99 115 Pfam PF10135 Rod binding protein 62 107 2.1E-13 T 31-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal DY252_00490 36f310162aa746941465add299484be9 195 SMART SM00857 2 136 3.4E-58 T 31-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DY252_00490 36f310162aa746941465add299484be9 195 Gene3D G3DSA:3.40.50.1390 1 125 2.1E-50 T 31-10-2018 DY252_00490 36f310162aa746941465add299484be9 195 Pfam PF00239 Resolvase, N terminal domain 3 136 1.9E-45 T 31-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DY252_00490 36f310162aa746941465add299484be9 195 SUPERFAMILY SSF46689 138 180 1.15E-5 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_00490 36f310162aa746941465add299484be9 195 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 31-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 DY252_00490 36f310162aa746941465add299484be9 195 Pfam PF13384 Homeodomain-like domain 144 186 1.6E-8 T 31-10-2018 DY252_00490 36f310162aa746941465add299484be9 195 SUPERFAMILY SSF53041 1 135 1.26E-45 T 31-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 DY252_00490 36f310162aa746941465add299484be9 195 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 31-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 DY252_11100 6e65ce842f12fa813e0c3eff85b14f4e 97 Gene3D G3DSA:3.30.160.190 1 79 8.7E-28 T 31-10-2018 IPR038532 NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_11100 6e65ce842f12fa813e0c3eff85b14f4e 97 Pfam PF04800 ETC complex I subunit conserved region 2 95 5.7E-31 T 31-10-2018 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 DY252_07175 885a3add988b108211da9ae33364335a 701 Gene3D G3DSA:2.30.110.10 175 304 6.8E-16 T 31-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DY252_07175 885a3add988b108211da9ae33364335a 701 Pfam PF00970 Oxidoreductase FAD-binding domain 349 443 2.1E-9 T 31-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DY252_07175 885a3add988b108211da9ae33364335a 701 PRINTS PR00410 Phenol hydroxylase reductase family signature 454 473 3.1E-10 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_07175 885a3add988b108211da9ae33364335a 701 PRINTS PR00410 Phenol hydroxylase reductase family signature 438 447 3.1E-10 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_07175 885a3add988b108211da9ae33364335a 701 PRINTS PR00410 Phenol hydroxylase reductase family signature 553 561 3.1E-10 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_07175 885a3add988b108211da9ae33364335a 701 PRINTS PR00410 Phenol hydroxylase reductase family signature 376 388 3.1E-10 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_07175 885a3add988b108211da9ae33364335a 701 Gene3D G3DSA:2.40.30.10 343 444 1.3E-32 T 31-10-2018 DY252_07175 885a3add988b108211da9ae33364335a 701 Gene3D G3DSA:3.10.20.30 602 690 1.1E-16 T 31-10-2018 IPR012675 Beta-grasp domain superfamily DY252_07175 885a3add988b108211da9ae33364335a 701 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 376 386 2.9E-5 T 31-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DY252_07175 885a3add988b108211da9ae33364335a 701 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 483 492 2.9E-5 T 31-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DY252_07175 885a3add988b108211da9ae33364335a 701 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 397 404 2.9E-5 T 31-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DY252_07175 885a3add988b108211da9ae33364335a 701 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 454 473 2.9E-5 T 31-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DY252_07175 885a3add988b108211da9ae33364335a 701 Gene3D G3DSA:3.40.50.80 448 591 9.0E-31 T 31-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DY252_07175 885a3add988b108211da9ae33364335a 701 Pfam PF00175 Oxidoreductase NAD-binding domain 455 565 1.1E-16 T 31-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DY252_07175 885a3add988b108211da9ae33364335a 701 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 647 655 - T 31-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DY252_07175 885a3add988b108211da9ae33364335a 701 SUPERFAMILY SSF63380 343 443 1.7E-27 T 31-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DY252_07175 885a3add988b108211da9ae33364335a 701 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 627 686 4.6E-10 T 31-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DY252_07175 885a3add988b108211da9ae33364335a 701 SUPERFAMILY SSF50475 183 300 4.66E-13 T 31-10-2018 DY252_07175 885a3add988b108211da9ae33364335a 701 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 184 281 2.0E-14 T 31-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DY252_07175 885a3add988b108211da9ae33364335a 701 SUPERFAMILY SSF52343 433 582 8.91E-33 T 31-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DY252_07175 885a3add988b108211da9ae33364335a 701 SUPERFAMILY SSF54292 600 688 9.57E-17 T 31-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DY252_17150 184eb8185944c1fc78fc9301c0ecff25 356 PIRSF PIRSF000294 6 352 1.7E-146 T 31-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 DY252_17150 184eb8185944c1fc78fc9301c0ecff25 356 Gene3D G3DSA:1.10.760.10 194 331 2.1E-111 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_17150 184eb8185944c1fc78fc9301c0ecff25 356 SUPERFAMILY SSF46626 194 350 1.44E-39 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_17150 184eb8185944c1fc78fc9301c0ecff25 356 Pfam PF03150 Di-haem cytochrome c peroxidase 58 207 6.7E-53 T 31-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 DY252_17150 184eb8185944c1fc78fc9301c0ecff25 356 Gene3D G3DSA:1.10.760.10 54 332 2.1E-111 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_17150 184eb8185944c1fc78fc9301c0ecff25 356 Pfam PF00034 Cytochrome c 216 328 8.6E-9 T 31-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_17150 184eb8185944c1fc78fc9301c0ecff25 356 SUPERFAMILY SSF46626 38 195 1.31E-52 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_09090 70281587f66871bd848f9f3bf05a43f8 338 SMART SM00662 26 233 8.5E-87 T 31-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_09090 70281587f66871bd848f9f3bf05a43f8 338 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 27 318 4.7E-116 T 31-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_09090 70281587f66871bd848f9f3bf05a43f8 338 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 32 227 2.2E-21 T 31-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_09090 70281587f66871bd848f9f3bf05a43f8 338 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 258 327 3.0E-33 T 31-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_09090 70281587f66871bd848f9f3bf05a43f8 338 SUPERFAMILY SSF56553 56 177 6.38E-40 T 31-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_09090 70281587f66871bd848f9f3bf05a43f8 338 SUPERFAMILY SSF47789 252 327 1.44E-26 T 31-10-2018 DY252_09090 70281587f66871bd848f9f3bf05a43f8 338 Gene3D G3DSA:2.170.120.12 56 176 9.2E-83 T 31-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_09090 70281587f66871bd848f9f3bf05a43f8 338 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 6 318 36.073 T 31-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_09090 70281587f66871bd848f9f3bf05a43f8 338 Gene3D G3DSA:3.30.1360.10 24 227 9.2E-83 T 31-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_09090 70281587f66871bd848f9f3bf05a43f8 338 SUPERFAMILY SSF55257 7 232 6.08E-28 T 31-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_09090 70281587f66871bd848f9f3bf05a43f8 338 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 65 158 1.8E-20 T 31-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_09090 70281587f66871bd848f9f3bf05a43f8 338 Gene3D G3DSA:1.10.150.20 246 330 3.0E-36 T 31-10-2018 DY252_09090 70281587f66871bd848f9f3bf05a43f8 338 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 251 309 1.1E-24 T 31-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_14640 f6c24d3d7c9041a2bf9c1f8f38ef0af8 299 Pfam PF03466 LysR substrate binding domain 96 281 2.3E-26 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_14640 f6c24d3d7c9041a2bf9c1f8f38ef0af8 299 SUPERFAMILY SSF46785 11 119 1.04E-23 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_14640 f6c24d3d7c9041a2bf9c1f8f38ef0af8 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 2.6E-19 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_14640 f6c24d3d7c9041a2bf9c1f8f38ef0af8 299 SUPERFAMILY SSF53850 94 290 4.26E-28 T 31-10-2018 DY252_14640 f6c24d3d7c9041a2bf9c1f8f38ef0af8 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 3.1E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_14640 f6c24d3d7c9041a2bf9c1f8f38ef0af8 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 3.1E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_14640 f6c24d3d7c9041a2bf9c1f8f38ef0af8 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 3.1E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_14640 f6c24d3d7c9041a2bf9c1f8f38ef0af8 299 Gene3D G3DSA:3.40.190.10 169 262 1.1E-49 T 31-10-2018 DY252_14640 f6c24d3d7c9041a2bf9c1f8f38ef0af8 299 Gene3D G3DSA:3.40.190.10 103 269 1.1E-49 T 31-10-2018 DY252_14640 f6c24d3d7c9041a2bf9c1f8f38ef0af8 299 Gene3D G3DSA:1.10.10.10 7 92 9.2E-25 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_17245 8d839bfe09ee29cdec9628bec1514de5 866 SUPERFAMILY SSF63829 357 570 4.9E-11 T 31-10-2018 DY252_17245 8d839bfe09ee29cdec9628bec1514de5 866 Gene3D G3DSA:2.130.10.10 349 579 3.4E-8 T 31-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DY252_17245 8d839bfe09ee29cdec9628bec1514de5 866 Gene3D G3DSA:2.130.10.10 618 865 6.0E-13 T 31-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DY252_17245 8d839bfe09ee29cdec9628bec1514de5 866 SUPERFAMILY SSF101898 43 237 4.45E-8 T 31-10-2018 DY252_17245 8d839bfe09ee29cdec9628bec1514de5 866 SMART SM00706 398 432 42.0 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_17245 8d839bfe09ee29cdec9628bec1514de5 866 SMART SM00706 739 784 220.0 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_17245 8d839bfe09ee29cdec9628bec1514de5 866 SMART SM00706 144 178 140.0 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_17245 8d839bfe09ee29cdec9628bec1514de5 866 SMART SM00706 72 106 0.17 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_17245 8d839bfe09ee29cdec9628bec1514de5 866 SMART SM00706 35 69 13.0 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_17245 8d839bfe09ee29cdec9628bec1514de5 866 SMART SM00706 359 395 37.0 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_17245 8d839bfe09ee29cdec9628bec1514de5 866 SMART SM00706 506 539 30.0 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_17245 8d839bfe09ee29cdec9628bec1514de5 866 SUPERFAMILY SSF63829 685 859 1.96E-10 T 31-10-2018 DY252_17245 8d839bfe09ee29cdec9628bec1514de5 866 SUPERFAMILY SSF101898 484 736 1.94E-16 T 31-10-2018 DY252_05495 40779b5e771f159ecbe4f54dee5b422b 462 SMART SM00044 195 422 2.8E-18 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_05495 40779b5e771f159ecbe4f54dee5b422b 462 SUPERFAMILY SSF55073 255 440 7.22E-51 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_05495 40779b5e771f159ecbe4f54dee5b422b 462 Gene3D G3DSA:3.30.70.1230 250 452 1.8E-52 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_05495 40779b5e771f159ecbe4f54dee5b422b 462 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 261 438 7.5E-32 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_17215 58ce2b98d012123bc74385979c8b0350 180 Gene3D G3DSA:1.10.10.10 102 169 9.9E-19 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_17215 58ce2b98d012123bc74385979c8b0350 180 SUPERFAMILY SSF88946 9 91 1.49E-16 T 31-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DY252_17215 58ce2b98d012123bc74385979c8b0350 180 Pfam PF04542 Sigma-70 region 2 17 81 6.4E-14 T 31-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DY252_17215 58ce2b98d012123bc74385979c8b0350 180 SUPERFAMILY SSF88659 105 162 1.02E-14 T 31-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DY252_17215 58ce2b98d012123bc74385979c8b0350 180 Pfam PF08281 Sigma-70, region 4 109 159 1.9E-15 T 31-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DY252_17215 58ce2b98d012123bc74385979c8b0350 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 160 3.3E-24 T 31-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DY252_17215 58ce2b98d012123bc74385979c8b0350 180 Gene3D G3DSA:1.10.1740.10 5 83 2.1E-18 T 31-10-2018 DY252_17075 35efa1bcb15a305a5e4d5ad2de03c480 286 Gene3D G3DSA:1.20.120.1760 8 175 2.6E-17 T 31-10-2018 DY252_17075 35efa1bcb15a305a5e4d5ad2de03c480 286 Pfam PF01066 CDP-alcohol phosphatidyltransferase 23 86 7.9E-13 T 31-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DY252_17075 35efa1bcb15a305a5e4d5ad2de03c480 286 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 64 86 - T 31-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DY252_17075 35efa1bcb15a305a5e4d5ad2de03c480 286 Pfam PF08009 CDP-alcohol phosphatidyltransferase 2 208 242 2.8E-8 T 31-10-2018 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal DY252_17075 35efa1bcb15a305a5e4d5ad2de03c480 286 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 28 193 2.0E-33 T 31-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 DY252_10660 91aba9ae01670ddb35e954b2bac3ac5e 349 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 30 346 1.1E-76 T 31-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 DY252_10660 91aba9ae01670ddb35e954b2bac3ac5e 349 Gene3D G3DSA:3.20.20.140 30 349 4.9E-81 T 31-10-2018 DY252_10660 91aba9ae01670ddb35e954b2bac3ac5e 349 SUPERFAMILY SSF51556 31 349 7.94E-60 T 31-10-2018 IPR032466 Metal-dependent hydrolase DY252_18730 ee790ba2ce295f87ed7891035aca3c8c 393 Pfam PF01321 Creatinase/Prolidase N-terminal domain 16 160 3.2E-24 T 31-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 DY252_18730 ee790ba2ce295f87ed7891035aca3c8c 393 Gene3D G3DSA:3.90.230.10 159 391 4.0E-40 T 31-10-2018 DY252_18730 ee790ba2ce295f87ed7891035aca3c8c 393 Gene3D G3DSA:3.40.350.10 1 158 1.2E-37 T 31-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DY252_18730 ee790ba2ce295f87ed7891035aca3c8c 393 Pfam PF00557 Metallopeptidase family M24 169 376 1.4E-29 T 31-10-2018 IPR000994 Peptidase M24 DY252_18730 ee790ba2ce295f87ed7891035aca3c8c 393 SUPERFAMILY SSF55920 160 391 3.4E-55 T 31-10-2018 IPR036005 Creatinase/aminopeptidase-like DY252_18730 ee790ba2ce295f87ed7891035aca3c8c 393 SUPERFAMILY SSF53092 3 158 4.36E-43 T 31-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DY252_18730 ee790ba2ce295f87ed7891035aca3c8c 393 TIGRFAM TIGR02993 ectoine_eutD: ectoine utilization protein EutD 3 393 8.9E-222 T 31-10-2018 IPR014335 Ectoine utilization protein EutD KEGG: 00260+3.5.4.44|MetaCyc: PWY-7855 DY252_04925 382d8c84c00e5a9e5918bb15be900ad5 370 Gene3D G3DSA:3.40.50.2000 182 320 9.4E-107 T 31-10-2018 DY252_04925 382d8c84c00e5a9e5918bb15be900ad5 370 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 355 2.5E-95 T 31-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DY252_04925 382d8c84c00e5a9e5918bb15be900ad5 370 SUPERFAMILY SSF53756 1 367 1.32E-110 T 31-10-2018 DY252_04925 382d8c84c00e5a9e5918bb15be900ad5 370 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 357 1.6E-71 T 31-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 DY252_04925 382d8c84c00e5a9e5918bb15be900ad5 370 Gene3D G3DSA:3.40.50.2000 1 181 9.4E-107 T 31-10-2018 DY252_12990 b1b680588757b830b8f912255a09d42a 390 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 46 64 - T 31-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site DY252_12990 b1b680588757b830b8f912255a09d42a 390 Gene3D G3DSA:3.20.20.10 44 259 7.0E-81 T 31-10-2018 IPR029066 PLP-binding barrel DY252_12990 b1b680588757b830b8f912255a09d42a 390 SUPERFAMILY SSF51419 19 262 2.18E-46 T 31-10-2018 IPR029066 PLP-binding barrel DY252_12990 b1b680588757b830b8f912255a09d42a 390 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 30 261 4.2E-36 T 31-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DY252_12990 b1b680588757b830b8f912255a09d42a 390 PRINTS PR01182 Ornithine decarboxylase signature 44 71 3.0E-10 T 31-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 DY252_12990 b1b680588757b830b8f912255a09d42a 390 PRINTS PR01182 Ornithine decarboxylase signature 318 328 3.0E-10 T 31-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 DY252_12990 b1b680588757b830b8f912255a09d42a 390 PRINTS PR01182 Ornithine decarboxylase signature 282 295 3.0E-10 T 31-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 DY252_12990 b1b680588757b830b8f912255a09d42a 390 PRINTS PR01182 Ornithine decarboxylase signature 339 352 3.0E-10 T 31-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 DY252_12990 b1b680588757b830b8f912255a09d42a 390 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 262 352 7.1E-13 T 31-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 DY252_12990 b1b680588757b830b8f912255a09d42a 390 SUPERFAMILY SSF50621 241 372 2.93E-30 T 31-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DY252_12990 b1b680588757b830b8f912255a09d42a 390 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 171 184 3.8E-21 T 31-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DY252_12990 b1b680588757b830b8f912255a09d42a 390 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 67 79 3.8E-21 T 31-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DY252_12990 b1b680588757b830b8f912255a09d42a 390 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 46 64 3.8E-21 T 31-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DY252_12990 b1b680588757b830b8f912255a09d42a 390 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 352 365 3.8E-21 T 31-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DY252_12990 b1b680588757b830b8f912255a09d42a 390 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 251 270 3.8E-21 T 31-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DY252_12990 b1b680588757b830b8f912255a09d42a 390 Gene3D G3DSA:2.40.37.10 260 364 7.0E-81 T 31-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DY252_16860 03baa0c10958362e22d6540b63cadaa9 315 Gene3D G3DSA:3.40.190.10 174 274 4.5E-28 T 31-10-2018 DY252_16860 03baa0c10958362e22d6540b63cadaa9 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 2.4E-19 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_16860 03baa0c10958362e22d6540b63cadaa9 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_16860 03baa0c10958362e22d6540b63cadaa9 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_16860 03baa0c10958362e22d6540b63cadaa9 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_16860 03baa0c10958362e22d6540b63cadaa9 315 Pfam PF03466 LysR substrate binding domain 88 283 3.5E-31 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_16860 03baa0c10958362e22d6540b63cadaa9 315 SUPERFAMILY SSF53850 89 283 2.05E-29 T 31-10-2018 DY252_16860 03baa0c10958362e22d6540b63cadaa9 315 SUPERFAMILY SSF46785 1 82 3.41E-20 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_16860 03baa0c10958362e22d6540b63cadaa9 315 Gene3D G3DSA:1.10.10.10 1 89 9.5E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_16860 03baa0c10958362e22d6540b63cadaa9 315 Gene3D G3DSA:3.40.190.10 90 283 4.5E-28 T 31-10-2018 DY252_09195 892cf63ac3638c613406df08f9644f67 666 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 31-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DY252_09195 892cf63ac3638c613406df08f9644f67 666 Gene3D G3DSA:3.30.470.130 1 448 1.2E-204 T 31-10-2018 DY252_09195 892cf63ac3638c613406df08f9644f67 666 Pfam PF00364 Biotin-requiring enzyme 599 661 1.3E-16 T 31-10-2018 IPR000089 Biotin/lipoyl attachment DY252_09195 892cf63ac3638c613406df08f9644f67 666 Gene3D G3DSA:3.30.700.30 450 583 1.8E-23 T 31-10-2018 DY252_09195 892cf63ac3638c613406df08f9644f67 666 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 31-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DY252_09195 892cf63ac3638c613406df08f9644f67 666 SUPERFAMILY SSF51246 331 446 1.15E-40 T 31-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DY252_09195 892cf63ac3638c613406df08f9644f67 666 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.1E-84 T 31-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DY252_09195 892cf63ac3638c613406df08f9644f67 666 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 3.8E-44 T 31-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DY252_09195 892cf63ac3638c613406df08f9644f67 666 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 4.4E-192 T 31-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 DY252_09195 892cf63ac3638c613406df08f9644f67 666 SUPERFAMILY SSF52440 1 113 6.19E-48 T 31-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DY252_09195 892cf63ac3638c613406df08f9644f67 666 SUPERFAMILY SSF56059 83 348 7.07E-72 T 31-10-2018 DY252_09195 892cf63ac3638c613406df08f9644f67 666 Gene3D G3DSA:2.40.50.100 588 665 2.6E-20 T 31-10-2018 DY252_09195 892cf63ac3638c613406df08f9644f67 666 SUPERFAMILY SSF51230 584 663 2.36E-19 T 31-10-2018 IPR011053 Single hybrid motif DY252_09195 892cf63ac3638c613406df08f9644f67 666 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 1.5E-37 T 31-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DY252_09195 892cf63ac3638c613406df08f9644f67 666 SMART SM00878 336 443 8.3E-56 T 31-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DY252_09065 2657bb851c694ca21bf7e59f578d9eca 161 ProSitePatterns PS00475 Ribosomal protein L15 signature. 115 145 - T 31-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09065 2657bb851c694ca21bf7e59f578d9eca 161 Gene3D G3DSA:3.100.10.10 66 152 1.2E-17 T 31-10-2018 DY252_09065 2657bb851c694ca21bf7e59f578d9eca 161 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 149 5.5E-46 T 31-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_09065 2657bb851c694ca21bf7e59f578d9eca 161 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 151 19.944 T 31-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 DY252_09065 2657bb851c694ca21bf7e59f578d9eca 161 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 149 4.5E-36 T 31-10-2018 IPR021131 Ribosomal protein L18e/L15P DY252_09065 2657bb851c694ca21bf7e59f578d9eca 161 SUPERFAMILY SSF52080 4 148 1.44E-42 T 31-10-2018 IPR036227 Ribosomal L18e/L15P superfamily DY252_09510 57e8b62f50001c63d9f0bd86cf8b14bb 493 SUPERFAMILY SSF53067 9 130 1.96E-34 T 31-10-2018 DY252_09510 57e8b62f50001c63d9f0bd86cf8b14bb 493 SUPERFAMILY SSF53067 134 305 2.75E-38 T 31-10-2018 DY252_09510 57e8b62f50001c63d9f0bd86cf8b14bb 493 Gene3D G3DSA:3.30.420.150 115 300 3.1E-51 T 31-10-2018 DY252_09510 57e8b62f50001c63d9f0bd86cf8b14bb 493 Gene3D G3DSA:1.10.3210.10 301 490 1.4E-53 T 31-10-2018 DY252_09510 57e8b62f50001c63d9f0bd86cf8b14bb 493 Gene3D G3DSA:3.30.420.40 2 114 1.4E-35 T 31-10-2018 DY252_09510 57e8b62f50001c63d9f0bd86cf8b14bb 493 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 10 301 7.6E-94 T 31-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 DY252_09510 57e8b62f50001c63d9f0bd86cf8b14bb 493 SUPERFAMILY SSF109604 325 482 3.45E-13 T 31-10-2018 DY252_09510 57e8b62f50001c63d9f0bd86cf8b14bb 493 Pfam PF02541 Ppx/GppA phosphatase family 32 302 1.6E-49 T 31-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 DY252_09000 9647ba0431754a51af7d471ffc738b22 228 Gene3D G3DSA:3.30.300.20 17 107 1.7E-32 T 31-10-2018 IPR015946 K homology domain-like, alpha/beta DY252_09000 9647ba0431754a51af7d471ffc738b22 228 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.821 T 31-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 DY252_09000 9647ba0431754a51af7d471ffc738b22 228 SMART SM00322 60 125 2.1E-9 T 31-10-2018 IPR004087 K Homology domain GO:0003676 DY252_09000 9647ba0431754a51af7d471ffc738b22 228 Pfam PF07650 KH domain 39 111 1.3E-20 T 31-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09000 9647ba0431754a51af7d471ffc738b22 228 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.2E-38 T 31-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09000 9647ba0431754a51af7d471ffc738b22 228 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 7.8E-97 T 31-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 DY252_09000 9647ba0431754a51af7d471ffc738b22 228 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 31-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09000 9647ba0431754a51af7d471ffc738b22 228 Gene3D G3DSA:3.30.1140.32 108 208 1.0E-42 T 31-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09000 9647ba0431754a51af7d471ffc738b22 228 SUPERFAMILY SSF54821 108 206 1.07E-38 T 31-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09000 9647ba0431754a51af7d471ffc738b22 228 SUPERFAMILY SSF54814 2 106 7.59E-40 T 31-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DY252_14735 9c8443427de30e96bbb0040477f3567d 65 PIRSF PIRSF039003 1 64 2.5E-35 T 31-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 DY252_14735 9c8443427de30e96bbb0040477f3567d 65 Gene3D G3DSA:1.10.10.600 1 64 7.7E-30 T 31-10-2018 IPR036762 IscX-like superfamily DY252_14735 9c8443427de30e96bbb0040477f3567d 65 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 2.1E-34 T 31-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 DY252_14735 9c8443427de30e96bbb0040477f3567d 65 SUPERFAMILY SSF140319 1 62 8.5E-27 T 31-10-2018 IPR036762 IscX-like superfamily DY252_14735 9c8443427de30e96bbb0040477f3567d 65 Pfam PF04384 Iron-sulphur cluster assembly 1 63 1.3E-32 T 31-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 DY252_01070 36d3afa8387bd971daaad30e6668a926 196 Gene3D G3DSA:3.30.1330.30 97 188 9.6E-13 T 31-10-2018 IPR029064 50S ribosomal protein L30e-like DY252_01070 36d3afa8387bd971daaad30e6668a926 196 Pfam PF04296 Protein of unknown function (DUF448) 15 90 2.2E-22 T 31-10-2018 IPR007393 Domain of unknown function DUF448 DY252_01070 36d3afa8387bd971daaad30e6668a926 196 SUPERFAMILY SSF64376 12 100 9.81E-26 T 31-10-2018 IPR035931 YlxR-like superfamily DY252_01070 36d3afa8387bd971daaad30e6668a926 196 Gene3D G3DSA:3.30.1230.10 6 96 7.7E-19 T 31-10-2018 IPR035931 YlxR-like superfamily DY252_01070 36d3afa8387bd971daaad30e6668a926 196 SUPERFAMILY SSF55315 96 183 3.43E-11 T 31-10-2018 IPR029064 50S ribosomal protein L30e-like DY252_22050 df82ead6c6066fcd90716d41783add2f 305 Gene3D G3DSA:3.40.50.1370 134 287 2.5E-116 T 31-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DY252_22050 df82ead6c6066fcd90716d41783add2f 305 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 5 300 3.6E-117 T 31-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DY252_22050 df82ead6c6066fcd90716d41783add2f 305 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 31-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DY252_22050 df82ead6c6066fcd90716d41783add2f 305 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 5 144 9.5E-49 T 31-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DY252_22050 df82ead6c6066fcd90716d41783add2f 305 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 298 2.3E-50 T 31-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DY252_22050 df82ead6c6066fcd90716d41783add2f 305 Gene3D G3DSA:3.40.50.1370 13 296 2.5E-116 T 31-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DY252_22050 df82ead6c6066fcd90716d41783add2f 305 SUPERFAMILY SSF53671 4 302 1.15E-105 T 31-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DY252_22050 df82ead6c6066fcd90716d41783add2f 305 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 4 301 75.909 T 31-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 DY252_22050 df82ead6c6066fcd90716d41783add2f 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 80 93 2.4E-31 T 31-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DY252_22050 df82ead6c6066fcd90716d41783add2f 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 218 228 2.4E-31 T 31-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DY252_22050 df82ead6c6066fcd90716d41783add2f 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 279 290 2.4E-31 T 31-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DY252_22050 df82ead6c6066fcd90716d41783add2f 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 2.4E-31 T 31-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DY252_22050 df82ead6c6066fcd90716d41783add2f 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 120 134 2.4E-31 T 31-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DY252_22050 df82ead6c6066fcd90716d41783add2f 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 253 262 8.1E-29 T 31-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DY252_22050 df82ead6c6066fcd90716d41783add2f 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 288 8.1E-29 T 31-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DY252_22050 df82ead6c6066fcd90716d41783add2f 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 8.1E-29 T 31-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DY252_22050 df82ead6c6066fcd90716d41783add2f 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 8.1E-29 T 31-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DY252_15875 e067540d905b12a9c5559f4a2c6be933 336 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 7 311 1.2E-39 T 31-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DY252_15875 e067540d905b12a9c5559f4a2c6be933 336 Pfam PF01545 Cation efflux family 11 224 2.4E-28 T 31-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DY252_15875 e067540d905b12a9c5559f4a2c6be933 336 Gene3D G3DSA:3.30.70.1350 232 311 1.5E-5 T 31-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DY252_15875 e067540d905b12a9c5559f4a2c6be933 336 SUPERFAMILY SSF161111 6 231 2.09E-35 T 31-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DY252_15875 e067540d905b12a9c5559f4a2c6be933 336 SUPERFAMILY SSF160240 234 310 3.79E-8 T 31-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DY252_15875 e067540d905b12a9c5559f4a2c6be933 336 Gene3D G3DSA:1.20.1510.10 6 229 9.8E-33 T 31-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DY252_06720 deacacc30b8e9dea2f6ac4a88808a536 325 Pfam PF16868 NMT1-like family 34 323 1.8E-95 T 31-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DY252_06720 deacacc30b8e9dea2f6ac4a88808a536 325 Gene3D G3DSA:3.40.190.10 121 259 8.3E-109 T 31-10-2018 DY252_06720 deacacc30b8e9dea2f6ac4a88808a536 325 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 323 9.9E-118 T 31-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DY252_06720 deacacc30b8e9dea2f6ac4a88808a536 325 Gene3D G3DSA:3.40.190.10 34 323 8.3E-109 T 31-10-2018 DY252_06720 deacacc30b8e9dea2f6ac4a88808a536 325 SUPERFAMILY SSF53850 30 325 1.76E-91 T 31-10-2018 DY252_13485 5bce1731539c1d28bef944e301ab2236 209 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 120 141 - T 31-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13485 5bce1731539c1d28bef944e301ab2236 209 Gene3D G3DSA:3.30.460.80 2 139 2.3E-44 T 31-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13485 5bce1731539c1d28bef944e301ab2236 209 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 19 167 32.648 T 31-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13485 5bce1731539c1d28bef944e301ab2236 209 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 39 159 7.1E-47 T 31-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13485 5bce1731539c1d28bef944e301ab2236 209 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 40 160 4.3E-47 T 31-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13485 5bce1731539c1d28bef944e301ab2236 209 SUPERFAMILY SSF143243 14 193 1.14E-63 T 31-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13485 5bce1731539c1d28bef944e301ab2236 209 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 90 146 4.0E-20 T 31-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_07920 a6358acb9c639e2f8894f82364755ccb 477 Pfam PF00158 Sigma-54 interaction domain 180 347 4.5E-67 T 31-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DY252_07920 a6358acb9c639e2f8894f82364755ccb 477 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 440 457 5.0E-5 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_07920 a6358acb9c639e2f8894f82364755ccb 477 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 457 477 5.0E-5 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_07920 a6358acb9c639e2f8894f82364755ccb 477 SUPERFAMILY SSF52540 180 410 1.11E-66 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07920 a6358acb9c639e2f8894f82364755ccb 477 SMART SM00382 200 343 9.3E-12 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_07920 a6358acb9c639e2f8894f82364755ccb 477 SUPERFAMILY SSF52172 35 224 5.12E-42 T 31-10-2018 IPR011006 CheY-like superfamily DY252_07920 a6358acb9c639e2f8894f82364755ccb 477 Gene3D G3DSA:1.10.10.60 432 474 1.5E-13 T 31-10-2018 DY252_07920 a6358acb9c639e2f8894f82364755ccb 477 Pfam PF00072 Response regulator receiver domain 38 147 6.6E-23 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_07920 a6358acb9c639e2f8894f82364755ccb 477 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 266 281 - T 31-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DY252_07920 a6358acb9c639e2f8894f82364755ccb 477 Pfam PF02954 Bacterial regulatory protein, Fis family 433 470 1.1E-10 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_07920 a6358acb9c639e2f8894f82364755ccb 477 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 393 402 - T 31-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DY252_07920 a6358acb9c639e2f8894f82364755ccb 477 SUPERFAMILY SSF46689 391 471 7.77E-13 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_07920 a6358acb9c639e2f8894f82364755ccb 477 Gene3D G3DSA:1.10.8.60 351 414 1.7E-16 T 31-10-2018 DY252_07920 a6358acb9c639e2f8894f82364755ccb 477 Gene3D G3DSA:3.40.50.2300 34 177 1.5E-32 T 31-10-2018 DY252_07920 a6358acb9c639e2f8894f82364755ccb 477 Gene3D G3DSA:3.40.50.300 178 350 5.0E-61 T 31-10-2018 DY252_07920 a6358acb9c639e2f8894f82364755ccb 477 SMART SM00448 36 147 1.0E-28 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_09975 ef5206b5d03f0c89cddcc77cf200e3a0 387 Gene3D G3DSA:3.30.1330.60 220 387 3.0E-44 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_09975 ef5206b5d03f0c89cddcc77cf200e3a0 387 SUPERFAMILY SSF103088 255 384 1.7E-27 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_09975 ef5206b5d03f0c89cddcc77cf200e3a0 387 Pfam PF00691 OmpA family 272 378 1.1E-17 T 31-10-2018 IPR006665 OmpA-like domain DY252_19840 6f8116b3a1058122a249e9b1d220ed97 268 Pfam PF13649 Methyltransferase domain 41 135 1.3E-17 T 31-10-2018 DY252_19840 6f8116b3a1058122a249e9b1d220ed97 268 Gene3D G3DSA:3.40.50.150 11 263 2.2E-80 T 31-10-2018 DY252_19840 6f8116b3a1058122a249e9b1d220ed97 268 SUPERFAMILY SSF53335 5 266 1.23E-35 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_19840 6f8116b3a1058122a249e9b1d220ed97 268 Gene3D G3DSA:1.10.150.290 143 246 2.2E-80 T 31-10-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 DY252_15795 f0d1a863c4340db3a61341be80a0debf 332 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 215 5.0E-41 T 31-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DY252_15795 f0d1a863c4340db3a61341be80a0debf 332 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 6 322 1.3E-93 T 31-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DY252_21470 dce96d42c263f2666ddb299a7247a3f6 250 SUPERFAMILY SSF51695 4 237 5.76E-66 T 31-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DY252_21470 dce96d42c263f2666ddb299a7247a3f6 250 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 10 235 7.6E-34 T 31-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 DY252_21470 dce96d42c263f2666ddb299a7247a3f6 250 Gene3D G3DSA:3.20.20.190 2 243 2.6E-73 T 31-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DY252_03815 cd2d142806c54051265ad151bd844692 459 Gene3D G3DSA:2.40.128.130 120 305 7.9E-9 T 31-10-2018 IPR036709 Autotransporter beta-domain superfamily DY252_03815 cd2d142806c54051265ad151bd844692 459 SUPERFAMILY SSF103515 135 331 3.14E-6 T 31-10-2018 IPR036709 Autotransporter beta-domain superfamily DY252_03815 cd2d142806c54051265ad151bd844692 459 Pfam PF03797 Autotransporter beta-domain 141 331 8.5E-6 T 31-10-2018 IPR005546 Autotransporter beta-domain DY252_11585 0f2672cefcb96a6e002f5014f4c31c76 278 Pfam PF12697 Alpha/beta hydrolase family 22 255 8.5E-22 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_11585 0f2672cefcb96a6e002f5014f4c31c76 278 Gene3D G3DSA:3.40.50.1820 17 272 8.1E-41 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_11585 0f2672cefcb96a6e002f5014f4c31c76 278 SUPERFAMILY SSF53474 16 262 3.02E-39 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_15820 799205584d533af82e4d249c5daaa8ae 639 PRINTS PR00315 GTP-binding elongation factor signature 87 95 6.9E-13 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_15820 799205584d533af82e4d249c5daaa8ae 639 PRINTS PR00315 GTP-binding elongation factor signature 160 169 6.9E-13 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_15820 799205584d533af82e4d249c5daaa8ae 639 PRINTS PR00315 GTP-binding elongation factor signature 123 134 6.9E-13 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_15820 799205584d533af82e4d249c5daaa8ae 639 PRINTS PR00315 GTP-binding elongation factor signature 107 117 6.9E-13 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_15820 799205584d533af82e4d249c5daaa8ae 639 PRINTS PR00315 GTP-binding elongation factor signature 26 39 6.9E-13 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_15820 799205584d533af82e4d249c5daaa8ae 639 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 459 53.705 T 31-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DY252_15820 799205584d533af82e4d249c5daaa8ae 639 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 31-10-2018 IPR031157 Tr-type G domain, conserved site DY252_15820 799205584d533af82e4d249c5daaa8ae 639 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 442 625 9.7E-80 T 31-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 DY252_15820 799205584d533af82e4d249c5daaa8ae 639 SUPERFAMILY SSF52540 20 249 2.07E-57 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_15820 799205584d533af82e4d249c5daaa8ae 639 SUPERFAMILY SSF50447 238 325 2.91E-26 T 31-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DY252_15820 799205584d533af82e4d249c5daaa8ae 639 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 430 2.4E-204 T 31-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DY252_15820 799205584d533af82e4d249c5daaa8ae 639 Gene3D G3DSA:2.40.30.10 238 325 4.9E-28 T 31-10-2018 DY252_15820 799205584d533af82e4d249c5daaa8ae 639 Gene3D G3DSA:2.40.30.10 327 431 9.0E-35 T 31-10-2018 DY252_15820 799205584d533af82e4d249c5daaa8ae 639 Gene3D G3DSA:3.40.50.300 1 236 2.9E-70 T 31-10-2018 DY252_15820 799205584d533af82e4d249c5daaa8ae 639 SUPERFAMILY SSF52540 457 629 2.66E-39 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_15820 799205584d533af82e4d249c5daaa8ae 639 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 209 8.5E-12 T 31-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DY252_15820 799205584d533af82e4d249c5daaa8ae 639 SUPERFAMILY SSF50465 329 430 3.74E-33 T 31-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DY252_15820 799205584d533af82e4d249c5daaa8ae 639 Pfam PF01583 Adenylylsulphate kinase 460 613 3.0E-74 T 31-10-2018 DY252_15820 799205584d533af82e4d249c5daaa8ae 639 Gene3D G3DSA:3.40.50.300 436 634 3.5E-80 T 31-10-2018 DY252_15820 799205584d533af82e4d249c5daaa8ae 639 Pfam PF03144 Elongation factor Tu domain 2 261 320 1.9E-7 T 31-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DY252_15820 799205584d533af82e4d249c5daaa8ae 639 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 458 630 39.464 T 31-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 DY252_15820 799205584d533af82e4d249c5daaa8ae 639 Pfam PF00009 Elongation factor Tu GTP binding domain 24 210 4.8E-41 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_12250 ddf6df5612dcd4aee541430a19b17d30 359 SUPERFAMILY SSF51569 3 354 1.17E-105 T 31-10-2018 DY252_12250 ddf6df5612dcd4aee541430a19b17d30 359 PIRSF PIRSF001359 9 355 1.1E-72 T 31-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DY252_12250 ddf6df5612dcd4aee541430a19b17d30 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 10 354 2.8E-89 T 31-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DY252_12250 ddf6df5612dcd4aee541430a19b17d30 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 166 177 - T 31-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DY252_12250 ddf6df5612dcd4aee541430a19b17d30 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 95 106 - T 31-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DY252_12250 ddf6df5612dcd4aee541430a19b17d30 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 354 1.2E-142 T 31-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 DY252_12250 ddf6df5612dcd4aee541430a19b17d30 359 Gene3D G3DSA:3.20.20.70 1 355 4.2E-116 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_12250 ddf6df5612dcd4aee541430a19b17d30 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 14 354 1.4E-80 T 31-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DY252_11590 91a6506d0fbb5b2eaaf6b942f0c1067f 226 Pfam PF13545 Crp-like helix-turn-helix domain 173 219 9.3E-7 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_11590 91a6506d0fbb5b2eaaf6b942f0c1067f 226 SMART SM00100 9 127 9.9E-13 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_11590 91a6506d0fbb5b2eaaf6b942f0c1067f 226 Pfam PF00027 Cyclic nucleotide-binding domain 28 115 3.7E-16 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_11590 91a6506d0fbb5b2eaaf6b942f0c1067f 226 SUPERFAMILY SSF46785 145 221 1.48E-7 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_11590 91a6506d0fbb5b2eaaf6b942f0c1067f 226 Gene3D G3DSA:1.10.10.10 144 224 1.4E-7 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_11590 91a6506d0fbb5b2eaaf6b942f0c1067f 226 Gene3D G3DSA:2.60.120.10 1 142 4.8E-32 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_11590 91a6506d0fbb5b2eaaf6b942f0c1067f 226 SUPERFAMILY SSF51206 7 141 3.4E-28 T 31-10-2018 IPR018490 Cyclic nucleotide-binding-like DY252_02350 a5dcf50ab59267d6f481d624974f156f 395 Gene3D G3DSA:3.50.50.60 8 365 5.9E-95 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_02350 a5dcf50ab59267d6f481d624974f156f 395 Pfam PF01266 FAD dependent oxidoreductase 9 364 3.0E-51 T 31-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DY252_02350 a5dcf50ab59267d6f481d624974f156f 395 SUPERFAMILY SSF51905 7 386 6.47E-47 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_02350 a5dcf50ab59267d6f481d624974f156f 395 Gene3D G3DSA:3.30.9.10 94 323 5.9E-95 T 31-10-2018 DY252_22010 560c1af78a20a3d741c955e888a69aa0 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 5.1E-6 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_22010 560c1af78a20a3d741c955e888a69aa0 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 5.1E-6 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_22010 560c1af78a20a3d741c955e888a69aa0 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 5.1E-6 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_22010 560c1af78a20a3d741c955e888a69aa0 151 Pfam PF01047 MarR family 39 97 3.3E-17 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_22010 560c1af78a20a3d741c955e888a69aa0 151 SUPERFAMILY SSF46785 8 141 9.59E-33 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_22010 560c1af78a20a3d741c955e888a69aa0 151 Gene3D G3DSA:1.10.10.10 5 144 1.3E-34 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_22010 560c1af78a20a3d741c955e888a69aa0 151 SMART SM00347 32 130 1.9E-21 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_20890 3d92d9e2ded297a4f49e17c72e8e5663 103 SMART SM00418 6 84 8.3E-20 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_20890 3d92d9e2ded297a4f49e17c72e8e5663 103 Gene3D G3DSA:1.10.10.10 1 98 3.5E-24 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_20890 3d92d9e2ded297a4f49e17c72e8e5663 103 Pfam PF01022 Bacterial regulatory protein, arsR family 13 58 1.1E-14 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_20890 3d92d9e2ded297a4f49e17c72e8e5663 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 2.9E-7 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_20890 3d92d9e2ded297a4f49e17c72e8e5663 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 2.9E-7 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_20890 3d92d9e2ded297a4f49e17c72e8e5663 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 2.9E-7 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_20890 3d92d9e2ded297a4f49e17c72e8e5663 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 2.9E-7 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_20890 3d92d9e2ded297a4f49e17c72e8e5663 103 SUPERFAMILY SSF46785 4 79 2.41E-20 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_12085 f7c8f6a8a28496e02723ae7b8951dc46 465 SUPERFAMILY SSF56322 25 459 1.23E-141 T 31-10-2018 IPR005801 ADC synthase GO:0009058 DY252_12085 f7c8f6a8a28496e02723ae7b8951dc46 465 PRINTS PR00095 Anthranilate synthase component I signature 311 324 1.0E-17 T 31-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DY252_12085 f7c8f6a8a28496e02723ae7b8951dc46 465 PRINTS PR00095 Anthranilate synthase component I signature 391 405 1.0E-17 T 31-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DY252_12085 f7c8f6a8a28496e02723ae7b8951dc46 465 PRINTS PR00095 Anthranilate synthase component I signature 297 310 1.0E-17 T 31-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DY252_12085 f7c8f6a8a28496e02723ae7b8951dc46 465 PRINTS PR00095 Anthranilate synthase component I signature 406 420 1.0E-17 T 31-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DY252_12085 f7c8f6a8a28496e02723ae7b8951dc46 465 Gene3D G3DSA:3.60.120.10 5 462 3.7E-157 T 31-10-2018 IPR005801 ADC synthase GO:0009058 DY252_12085 f7c8f6a8a28496e02723ae7b8951dc46 465 Pfam PF04715 Anthranilate synthase component I, N terminal region 10 138 4.5E-24 T 31-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DY252_12085 f7c8f6a8a28496e02723ae7b8951dc46 465 Pfam PF00425 chorismate binding enzyme 192 449 1.2E-96 T 31-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DY252_12085 f7c8f6a8a28496e02723ae7b8951dc46 465 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 91 452 7.7E-110 T 31-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 DY252_02450 61fed0271f5e75231216c2901c069954 334 SUPERFAMILY SSF48179 177 329 1.04E-51 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_02450 61fed0271f5e75231216c2901c069954 334 PIRSF PIRSF000114 1 330 9.6E-97 T 31-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DY252_02450 61fed0271f5e75231216c2901c069954 334 Gene3D G3DSA:3.40.50.720 1 185 3.9E-56 T 31-10-2018 DY252_02450 61fed0271f5e75231216c2901c069954 334 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 157 1.5E-42 T 31-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DY252_02450 61fed0271f5e75231216c2901c069954 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 7 24 2.0E-38 T 31-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DY252_02450 61fed0271f5e75231216c2901c069954 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 171 195 2.0E-38 T 31-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DY252_02450 61fed0271f5e75231216c2901c069954 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 2.0E-38 T 31-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DY252_02450 61fed0271f5e75231216c2901c069954 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 131 151 2.0E-38 T 31-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DY252_02450 61fed0271f5e75231216c2901c069954 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 196 220 2.0E-38 T 31-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DY252_02450 61fed0271f5e75231216c2901c069954 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 236 253 2.0E-38 T 31-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DY252_02450 61fed0271f5e75231216c2901c069954 334 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 178 317 1.2E-47 T 31-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DY252_02450 61fed0271f5e75231216c2901c069954 334 Gene3D G3DSA:1.10.1040.10 187 334 1.5E-48 T 31-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DY252_02450 61fed0271f5e75231216c2901c069954 334 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 186 207 - T 31-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DY252_02450 61fed0271f5e75231216c2901c069954 334 SUPERFAMILY SSF51735 1 178 6.48E-47 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_02450 61fed0271f5e75231216c2901c069954 334 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 3 320 34.686 T 31-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DY252_00515 b0e95ecbe0b88226c2114b9d3c6ce3cc 628 Pfam PF12728 Helix-turn-helix domain 391 443 1.2E-6 T 31-10-2018 DY252_00515 b0e95ecbe0b88226c2114b9d3c6ce3cc 628 Pfam PF06527 TniQ 12 134 4.4E-18 T 31-10-2018 IPR009492 TniQ DY252_14905 ae846f2a8302e613c276817a6fc86d4a 331 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 3.5E-20 T 31-10-2018 IPR010035 ThiS, thiamine-biosynthesis DY252_14905 ae846f2a8302e613c276817a6fc86d4a 331 Hamap MF_00443 Thiazole synthase [thiG]. 79 331 41.148 T 31-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 DY252_14905 ae846f2a8302e613c276817a6fc86d4a 331 Pfam PF05690 Thiazole biosynthesis protein ThiG 82 326 1.5E-108 T 31-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 DY252_14905 ae846f2a8302e613c276817a6fc86d4a 331 Pfam PF02597 ThiS family 4 66 4.6E-11 T 31-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 DY252_14905 ae846f2a8302e613c276817a6fc86d4a 331 SUPERFAMILY SSF54285 2 65 1.21E-15 T 31-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DY252_14905 ae846f2a8302e613c276817a6fc86d4a 331 Gene3D G3DSA:3.20.20.70 72 331 2.1E-115 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_14905 ae846f2a8302e613c276817a6fc86d4a 331 SUPERFAMILY SSF110399 79 318 2.49E-88 T 31-10-2018 DY252_14905 ae846f2a8302e613c276817a6fc86d4a 331 Gene3D G3DSA:3.10.20.30 1 71 9.3E-21 T 31-10-2018 IPR012675 Beta-grasp domain superfamily DY252_12180 9be5b6f859460faf1b0ca21de7520040 217 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 13 214 2.8E-62 T 31-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 DY252_12180 9be5b6f859460faf1b0ca21de7520040 217 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 14 210 1.4E-58 T 31-10-2018 DY252_12180 9be5b6f859460faf1b0ca21de7520040 217 SUPERFAMILY SSF53335 17 214 1.39E-44 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_12180 9be5b6f859460faf1b0ca21de7520040 217 Gene3D G3DSA:3.40.50.150 3 216 7.3E-70 T 31-10-2018 DY252_12180 9be5b6f859460faf1b0ca21de7520040 217 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 136 151 - T 31-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 DY252_12180 9be5b6f859460faf1b0ca21de7520040 217 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 7 216 35.672 T 31-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 DY252_01540 a847e4caf40e2187bfd28e766e0287b5 237 SUPERFAMILY SSF53098 1 170 3.62E-51 T 31-10-2018 IPR012337 Ribonuclease H-like superfamily DY252_01540 a847e4caf40e2187bfd28e766e0287b5 237 SMART SM00479 2 173 1.4E-43 T 31-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DY252_01540 a847e4caf40e2187bfd28e766e0287b5 237 Gene3D G3DSA:3.30.420.10 2 173 1.0E-49 T 31-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DY252_01540 a847e4caf40e2187bfd28e766e0287b5 237 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 171 8.2E-53 T 31-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DY252_01540 a847e4caf40e2187bfd28e766e0287b5 237 Pfam PF00929 Exonuclease 4 164 1.3E-34 T 31-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DY252_01540 a847e4caf40e2187bfd28e766e0287b5 237 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 231 2.0E-82 T 31-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DY252_10600 4c0cbdb1ac535d9c5d9db85a08354298 566 Gene3D G3DSA:3.30.450.20 33 185 8.6E-41 T 31-10-2018 DY252_10600 4c0cbdb1ac535d9c5d9db85a08354298 566 SMART SM01049 34 129 3.3E-32 T 31-10-2018 IPR033480 Single Cache domain 2 DY252_10600 4c0cbdb1ac535d9c5d9db85a08354298 566 SMART SM00304 512 565 52.0 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_10600 4c0cbdb1ac535d9c5d9db85a08354298 566 SMART SM00304 213 266 2.3E-4 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_10600 4c0cbdb1ac535d9c5d9db85a08354298 566 Gene3D G3DSA:1.10.287.950 271 557 7.5E-56 T 31-10-2018 DY252_10600 4c0cbdb1ac535d9c5d9db85a08354298 566 SUPERFAMILY SSF58104 277 556 1.57E-60 T 31-10-2018 DY252_10600 4c0cbdb1ac535d9c5d9db85a08354298 566 SUPERFAMILY SSF158472 213 261 7.19E-6 T 31-10-2018 DY252_10600 4c0cbdb1ac535d9c5d9db85a08354298 566 Pfam PF17200 Single Cache domain 2 38 189 4.0E-36 T 31-10-2018 IPR033480 Single Cache domain 2 DY252_10600 4c0cbdb1ac535d9c5d9db85a08354298 566 SMART SM00283 310 557 1.8E-47 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_10600 4c0cbdb1ac535d9c5d9db85a08354298 566 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 366 529 9.3E-33 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_10600 4c0cbdb1ac535d9c5d9db85a08354298 566 Gene3D G3DSA:1.20.1480.50 186 270 4.2E-14 T 31-10-2018 DY252_13010 118ea35bfcf6d97cde83a405985696df 160 SUPERFAMILY SSF50475 4 158 4.81E-41 T 31-10-2018 DY252_13010 118ea35bfcf6d97cde83a405985696df 160 SMART SM00903 12 157 7.6E-51 T 31-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DY252_13010 118ea35bfcf6d97cde83a405985696df 160 Gene3D G3DSA:2.30.110.10 1 159 3.9E-46 T 31-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DY252_13010 118ea35bfcf6d97cde83a405985696df 160 Pfam PF01613 Flavin reductase like domain 13 158 1.3E-32 T 31-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DY252_11900 ebed31edaf7d770c6a550250d99d57b9 253 SUPERFAMILY SSF55781 75 250 3.47E-49 T 31-10-2018 DY252_11900 ebed31edaf7d770c6a550250d99d57b9 253 Gene3D G3DSA:1.10.10.10 2 77 4.8E-20 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_11900 ebed31edaf7d770c6a550250d99d57b9 253 SUPERFAMILY SSF46785 4 76 5.0E-16 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_11900 ebed31edaf7d770c6a550250d99d57b9 253 SMART SM00346 4 94 3.0E-28 T 31-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DY252_11900 ebed31edaf7d770c6a550250d99d57b9 253 Gene3D G3DSA:3.30.450.40 78 252 1.5E-58 T 31-10-2018 IPR029016 GAF-like domain superfamily DY252_11900 ebed31edaf7d770c6a550250d99d57b9 253 Pfam PF01614 Bacterial transcriptional regulator 122 246 2.6E-32 T 31-10-2018 IPR014757 Transcription regulator IclR, C-terminal DY252_11900 ebed31edaf7d770c6a550250d99d57b9 253 Pfam PF09339 IclR helix-turn-helix domain 6 55 2.6E-18 T 31-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DY252_12120 cbfd01634498e7d15d254ac395073ba7 583 Gene3D G3DSA:3.40.50.620 123 446 2.9E-144 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_12120 cbfd01634498e7d15d254ac395073ba7 583 SUPERFAMILY SSF52374 117 463 9.21E-82 T 31-10-2018 DY252_12120 cbfd01634498e7d15d254ac395073ba7 583 SMART SM00836 452 583 6.3E-57 T 31-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DY252_12120 cbfd01634498e7d15d254ac395073ba7 583 Pfam PF05746 DALR anticodon binding domain 452 583 1.9E-29 T 31-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DY252_12120 cbfd01634498e7d15d254ac395073ba7 583 SUPERFAMILY SSF47323 446 583 2.09E-32 T 31-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_12120 cbfd01634498e7d15d254ac395073ba7 583 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 133 142 - T 31-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_12120 cbfd01634498e7d15d254ac395073ba7 583 Pfam PF00750 tRNA synthetases class I (R) 102 190 2.4E-11 T 31-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 DY252_12120 cbfd01634498e7d15d254ac395073ba7 583 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 17 93 5.2E-21 T 31-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DY252_12120 cbfd01634498e7d15d254ac395073ba7 583 SMART SM01016 5 94 1.9E-34 T 31-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DY252_12120 cbfd01634498e7d15d254ac395073ba7 583 Gene3D G3DSA:3.30.1360.70 1 111 1.2E-23 T 31-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DY252_12120 cbfd01634498e7d15d254ac395073ba7 583 Gene3D G3DSA:1.10.730.10 447 583 2.9E-144 T 31-10-2018 DY252_12120 cbfd01634498e7d15d254ac395073ba7 583 SUPERFAMILY SSF55190 1 114 3.53E-24 T 31-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DY252_12120 cbfd01634498e7d15d254ac395073ba7 583 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 28 583 9.6E-110 T 31-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DY252_12120 cbfd01634498e7d15d254ac395073ba7 583 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 583 24.342 T 31-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DY252_12120 cbfd01634498e7d15d254ac395073ba7 583 PRINTS PR01038 Arginyl-tRNA synthetase signature 321 342 3.4E-23 T 31-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DY252_12120 cbfd01634498e7d15d254ac395073ba7 583 PRINTS PR01038 Arginyl-tRNA synthetase signature 123 138 3.4E-23 T 31-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DY252_12120 cbfd01634498e7d15d254ac395073ba7 583 PRINTS PR01038 Arginyl-tRNA synthetase signature 138 154 3.4E-23 T 31-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DY252_12120 cbfd01634498e7d15d254ac395073ba7 583 PRINTS PR01038 Arginyl-tRNA synthetase signature 162 175 3.4E-23 T 31-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DY252_00930 c4188c9e4fc2b34beaa808d3a896ea15 644 SUPERFAMILY SSF159672 20 245 2.62E-46 T 31-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 DY252_00930 c4188c9e4fc2b34beaa808d3a896ea15 644 Gene3D G3DSA:3.40.50.11220 17 143 2.1E-24 T 31-10-2018 DY252_00930 c4188c9e4fc2b34beaa808d3a896ea15 644 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 376 622 2.8E-88 T 31-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 DY252_00930 c4188c9e4fc2b34beaa808d3a896ea15 644 Gene3D G3DSA:3.40.1010.10 368 488 2.4E-24 T 31-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DY252_00930 c4188c9e4fc2b34beaa808d3a896ea15 644 SUPERFAMILY SSF53790 370 622 1.96E-49 T 31-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DY252_00930 c4188c9e4fc2b34beaa808d3a896ea15 644 Pfam PF11760 Cobalamin synthesis G N-terminal 69 148 4.1E-26 T 31-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 DY252_00930 c4188c9e4fc2b34beaa808d3a896ea15 644 Gene3D G3DSA:3.30.950.10 489 623 5.1E-53 T 31-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DY252_00930 c4188c9e4fc2b34beaa808d3a896ea15 644 Gene3D G3DSA:3.30.420.180 228 364 6.3E-41 T 31-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 DY252_00930 c4188c9e4fc2b34beaa808d3a896ea15 644 SUPERFAMILY SSF159664 231 360 1.19E-39 T 31-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 DY252_00930 c4188c9e4fc2b34beaa808d3a896ea15 644 Pfam PF01890 Cobalamin synthesis G C-terminus 238 358 5.7E-30 T 31-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 DY252_00930 c4188c9e4fc2b34beaa808d3a896ea15 644 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 375 586 1.0E-32 T 31-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DY252_19640 a24d39006ea516befc9cddebbe1189b7 443 Gene3D G3DSA:3.40.50.150 45 265 3.0E-24 T 31-10-2018 DY252_19640 a24d39006ea516befc9cddebbe1189b7 443 Pfam PF08242 Methyltransferase domain 57 152 2.2E-12 T 31-10-2018 IPR013217 Methyltransferase type 12 DY252_19640 a24d39006ea516befc9cddebbe1189b7 443 SUPERFAMILY SSF53335 52 163 6.91E-23 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_18620 78c34e0f337e2c873a1ccb22dbb58957 386 SUPERFAMILY SSF55073 237 385 6.51E-38 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_18620 78c34e0f337e2c873a1ccb22dbb58957 386 SMART SM00267 222 386 1.6E-42 T 31-10-2018 IPR000160 GGDEF domain DY252_18620 78c34e0f337e2c873a1ccb22dbb58957 386 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 230 386 3.3E-38 T 31-10-2018 IPR000160 GGDEF domain DY252_18620 78c34e0f337e2c873a1ccb22dbb58957 386 Gene3D G3DSA:3.30.70.270 221 386 8.2E-48 T 31-10-2018 DY252_18620 78c34e0f337e2c873a1ccb22dbb58957 386 Pfam PF00990 Diguanylate cyclase, GGDEF domain 232 383 5.4E-36 T 31-10-2018 IPR000160 GGDEF domain DY252_11805 3e0730f4de263b087520a4b728e839f4 530 PRINTS PR01607 Apyrase family signature 466 485 2.5E-34 T 31-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_11805 3e0730f4de263b087520a4b728e839f4 530 PRINTS PR01607 Apyrase family signature 389 412 2.5E-34 T 31-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_11805 3e0730f4de263b087520a4b728e839f4 530 PRINTS PR01607 Apyrase family signature 270 290 2.5E-34 T 31-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_11805 3e0730f4de263b087520a4b728e839f4 530 PRINTS PR01607 Apyrase family signature 26 44 2.5E-34 T 31-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_11805 3e0730f4de263b087520a4b728e839f4 530 PRINTS PR01607 Apyrase family signature 228 251 2.5E-34 T 31-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_11805 3e0730f4de263b087520a4b728e839f4 530 PRINTS PR01607 Apyrase family signature 209 226 2.5E-34 T 31-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_11805 3e0730f4de263b087520a4b728e839f4 530 Pfam PF00149 Calcineurin-like phosphoesterase 28 245 8.4E-12 T 31-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DY252_11805 3e0730f4de263b087520a4b728e839f4 530 Gene3D G3DSA:3.90.780.10 337 530 7.9E-63 T 31-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_11805 3e0730f4de263b087520a4b728e839f4 530 SUPERFAMILY SSF56300 26 326 1.72E-85 T 31-10-2018 DY252_11805 3e0730f4de263b087520a4b728e839f4 530 SUPERFAMILY SSF55816 335 528 2.62E-55 T 31-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_11805 3e0730f4de263b087520a4b728e839f4 530 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 31-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_11805 3e0730f4de263b087520a4b728e839f4 530 Pfam PF02872 5'-nucleotidase, C-terminal domain 335 491 6.1E-40 T 31-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_11805 3e0730f4de263b087520a4b728e839f4 530 Gene3D G3DSA:3.60.21.10 20 336 2.1E-103 T 31-10-2018 IPR029052 Metallo-dependent phosphatase-like DY252_02580 3f0414896a94024a054e97de151f50d4 1154 Gene3D G3DSA:3.40.50.300 353 507 1.8E-28 T 31-10-2018 DY252_02580 3f0414896a94024a054e97de151f50d4 1154 Gene3D G3DSA:3.40.50.300 773 922 9.7E-20 T 31-10-2018 DY252_02580 3f0414896a94024a054e97de151f50d4 1154 Gene3D G3DSA:3.40.50.300 565 669 2.5E-13 T 31-10-2018 DY252_02580 3f0414896a94024a054e97de151f50d4 1154 Gene3D G3DSA:3.90.320.10 1074 1143 7.7E-8 T 31-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal DY252_02580 3f0414896a94024a054e97de151f50d4 1154 Pfam PF13361 UvrD-like helicase C-terminal domain 782 882 7.2E-13 T 31-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DY252_02580 3f0414896a94024a054e97de151f50d4 1154 SUPERFAMILY SSF52980 995 1126 5.9E-7 T 31-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DY252_02580 3f0414896a94024a054e97de151f50d4 1154 TIGRFAM TIGR02784 addA_alphas: double-strand break repair helicase AddA 13 1146 0.0 T 31-10-2018 IPR014151 DNA helicase, AddA type DY252_02580 3f0414896a94024a054e97de151f50d4 1154 SUPERFAMILY SSF52540 20 889 9.52E-103 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_02580 3f0414896a94024a054e97de151f50d4 1154 Pfam PF00580 UvrD/REP helicase N-terminal domain 13 469 4.3E-52 T 31-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DY252_02580 3f0414896a94024a054e97de151f50d4 1154 Pfam PF12705 PD-(D/E)XK nuclease superfamily 994 1129 1.4E-9 T 31-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type DY252_01170 6880ca8298108b847c70dc1b43ca3f01 284 Gene3D G3DSA:1.10.3720.10 1 271 4.9E-55 T 31-10-2018 IPR035906 MetI-like superfamily DY252_01170 6880ca8298108b847c70dc1b43ca3f01 284 SUPERFAMILY SSF161098 3 284 1.44E-62 T 31-10-2018 IPR035906 MetI-like superfamily DY252_01170 6880ca8298108b847c70dc1b43ca3f01 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 268 4.6E-21 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_12390 0bb72b8ac223aebd123c35354ac8a88f 746 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 164 729 7.9E-183 T 31-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ DY252_12390 0bb72b8ac223aebd123c35354ac8a88f 746 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 230 657 6.3E-88 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_18215 06d3e28e0ae1310c0f8449301074df60 380 Pfam PF13439 Glycosyltransferase Family 4 14 165 2.5E-17 T 31-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DY252_18215 06d3e28e0ae1310c0f8449301074df60 380 Gene3D G3DSA:3.40.50.2000 1 175 4.4E-25 T 31-10-2018 DY252_18215 06d3e28e0ae1310c0f8449301074df60 380 Pfam PF13692 Glycosyl transferases group 1 181 302 1.1E-16 T 31-10-2018 DY252_18215 06d3e28e0ae1310c0f8449301074df60 380 Gene3D G3DSA:3.40.50.2000 177 329 1.2E-22 T 31-10-2018 DY252_18215 06d3e28e0ae1310c0f8449301074df60 380 SUPERFAMILY SSF53756 1 327 1.13E-62 T 31-10-2018 DY252_14620 9db2f0c5625bb7100846515968d6aaa6 322 PIRSF PIRSF006470 1 321 2.1E-75 T 31-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DY252_14620 9db2f0c5625bb7100846515968d6aaa6 322 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 28 305 3.2E-78 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_14620 9db2f0c5625bb7100846515968d6aaa6 322 Gene3D G3DSA:3.40.190.170 17 320 7.3E-94 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_14620 9db2f0c5625bb7100846515968d6aaa6 322 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 30 280 4.0E-53 T 31-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DY252_02840 350e1768a42aed3f4375bb9c756d7d48 333 Gene3D G3DSA:3.40.50.720 124 272 4.2E-104 T 31-10-2018 DY252_02840 350e1768a42aed3f4375bb9c756d7d48 333 SUPERFAMILY SSF50129 1 141 8.11E-38 T 31-10-2018 IPR011032 GroES-like superfamily DY252_02840 350e1768a42aed3f4375bb9c756d7d48 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 91 2.7E-12 T 31-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DY252_02840 350e1768a42aed3f4375bb9c756d7d48 333 SUPERFAMILY SSF51735 112 276 1.67E-52 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_02840 350e1768a42aed3f4375bb9c756d7d48 333 Gene3D G3DSA:3.90.180.10 18 323 4.2E-104 T 31-10-2018 DY252_02840 350e1768a42aed3f4375bb9c756d7d48 333 Pfam PF00107 Zinc-binding dehydrogenase 152 280 1.8E-31 T 31-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DY252_02840 350e1768a42aed3f4375bb9c756d7d48 333 SMART SM00829 10 327 1.8E-54 T 31-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DY252_12630 a9dbef368811f3aa31e62da5c1cac5e5 424 SUPERFAMILY SSF51905 32 352 1.14E-26 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_12630 a9dbef368811f3aa31e62da5c1cac5e5 424 SUPERFAMILY SSF51905 146 281 1.55E-33 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_12630 a9dbef368811f3aa31e62da5c1cac5e5 424 SUPERFAMILY SSF55424 356 424 3.57E-15 T 31-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DY252_12630 a9dbef368811f3aa31e62da5c1cac5e5 424 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 32 147 3.0E-10 T 31-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DY252_12630 a9dbef368811f3aa31e62da5c1cac5e5 424 Gene3D G3DSA:3.50.50.60 34 343 8.0E-97 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_12630 a9dbef368811f3aa31e62da5c1cac5e5 424 Gene3D G3DSA:3.50.50.60 148 282 8.0E-97 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_12630 a9dbef368811f3aa31e62da5c1cac5e5 424 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 358 423 3.7E-18 T 31-10-2018 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 DY252_12630 a9dbef368811f3aa31e62da5c1cac5e5 424 Gene3D G3DSA:3.90.760.10 356 424 1.2E-10 T 31-10-2018 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 DY252_11485 c8e40a25d50e70d771e2da0496e86228 524 SMART SM01027 260 375 9.5E-44 T 31-10-2018 IPR022712 Beta-Casp domain DY252_11485 c8e40a25d50e70d771e2da0496e86228 524 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 389 446 1.8E-9 T 31-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain DY252_11485 c8e40a25d50e70d771e2da0496e86228 524 Gene3D G3DSA:3.60.15.10 8 435 6.7E-131 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_11485 c8e40a25d50e70d771e2da0496e86228 524 Pfam PF00753 Metallo-beta-lactamase superfamily 12 117 1.9E-16 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_11485 c8e40a25d50e70d771e2da0496e86228 524 SUPERFAMILY SSF56281 3 460 1.24E-112 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_11485 c8e40a25d50e70d771e2da0496e86228 524 Gene3D G3DSA:3.40.50.10890 228 401 6.7E-131 T 31-10-2018 DY252_11485 c8e40a25d50e70d771e2da0496e86228 524 Pfam PF10996 Beta-Casp domain 260 374 7.2E-24 T 31-10-2018 IPR022712 Beta-Casp domain DY252_11485 c8e40a25d50e70d771e2da0496e86228 524 SMART SM00849 15 247 3.5E-19 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_16415 6cf83fa9c8c03d04160184ab0296a8d6 284 Gene3D G3DSA:3.20.10.10 122 283 5.0E-51 T 31-10-2018 DY252_16415 6cf83fa9c8c03d04160184ab0296a8d6 284 Pfam PF01063 Amino-transferase class IV 30 254 5.7E-40 T 31-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DY252_16415 6cf83fa9c8c03d04160184ab0296a8d6 284 SUPERFAMILY SSF56752 4 277 5.49E-74 T 31-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DY252_16415 6cf83fa9c8c03d04160184ab0296a8d6 284 ProSitePatterns PS00770 Aminotransferases class-IV signature. 179 209 - T 31-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 DY252_16415 6cf83fa9c8c03d04160184ab0296a8d6 284 Gene3D G3DSA:3.30.470.10 1 118 1.1E-32 T 31-10-2018 DY252_19075 726d391308a312f37fd329a96feb736b 280 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 72 278 2.4E-72 T 31-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DY252_19075 726d391308a312f37fd329a96feb736b 280 Gene3D G3DSA:3.90.850.10 67 280 1.1E-86 T 31-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DY252_19075 726d391308a312f37fd329a96feb736b 280 SUPERFAMILY SSF56529 62 278 1.44E-81 T 31-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DY252_11730 8a0b50516769e778a3d0a20edd777eac 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.0E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_11730 8a0b50516769e778a3d0a20edd777eac 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.0E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_11730 8a0b50516769e778a3d0a20edd777eac 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.0E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_11730 8a0b50516769e778a3d0a20edd777eac 299 SUPERFAMILY SSF53850 85 292 1.07E-18 T 31-10-2018 DY252_11730 8a0b50516769e778a3d0a20edd777eac 299 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 294 2.7E-101 T 31-10-2018 IPR017685 HTH-type transcriptional regulator ArgP DY252_11730 8a0b50516769e778a3d0a20edd777eac 299 SUPERFAMILY SSF46785 2 109 9.37E-17 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_11730 8a0b50516769e778a3d0a20edd777eac 299 Gene3D G3DSA:3.40.190.290 90 293 4.4E-67 T 31-10-2018 DY252_11730 8a0b50516769e778a3d0a20edd777eac 299 Gene3D G3DSA:1.10.10.10 1 83 5.8E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_11730 8a0b50516769e778a3d0a20edd777eac 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 3.7E-15 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_11730 8a0b50516769e778a3d0a20edd777eac 299 Pfam PF03466 LysR substrate binding domain 92 270 2.0E-13 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_10935 194953100fbd70c97a71819af958789f 586 Gene3D G3DSA:3.90.1640.30 62 336 3.9E-85 T 31-10-2018 DY252_10935 194953100fbd70c97a71819af958789f 586 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 33 582 4.4E-166 T 31-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 DY252_10935 194953100fbd70c97a71819af958789f 586 Pfam PF01368 DHH family 88 178 6.3E-8 T 31-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DY252_10935 194953100fbd70c97a71819af958789f 586 SUPERFAMILY SSF64182 61 469 4.71E-118 T 31-10-2018 IPR038763 DHH phosphoesterase superfamily DY252_10935 194953100fbd70c97a71819af958789f 586 Pfam PF02272 DHHA1 domain 332 455 1.1E-22 T 31-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DY252_10935 194953100fbd70c97a71819af958789f 586 Gene3D G3DSA:3.10.310.30 337 461 1.5E-29 T 31-10-2018 DY252_06455 a4d62750132fe50c260baba169c9dcbf 314 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 314 94.485 T 31-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_06455 a4d62750132fe50c260baba169c9dcbf 314 Gene3D G3DSA:3.30.465.10 93 218 1.4E-36 T 31-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DY252_06455 a4d62750132fe50c260baba169c9dcbf 314 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 28 302 2.5E-57 T 31-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_06455 a4d62750132fe50c260baba169c9dcbf 314 Gene3D G3DSA:3.90.78.10 219 308 3.2E-31 T 31-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_06455 a4d62750132fe50c260baba169c9dcbf 314 Pfam PF01565 FAD binding domain 40 168 6.1E-22 T 31-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DY252_06455 a4d62750132fe50c260baba169c9dcbf 314 Gene3D G3DSA:3.30.43.10 8 89 2.4E-23 T 31-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DY252_06455 a4d62750132fe50c260baba169c9dcbf 314 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 203 301 1.6E-27 T 31-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_06455 a4d62750132fe50c260baba169c9dcbf 314 SUPERFAMILY SSF56194 198 303 5.49E-35 T 31-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_06455 a4d62750132fe50c260baba169c9dcbf 314 SUPERFAMILY SSF56176 27 211 1.85E-45 T 31-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DY252_07670 a6522e03723b7983e7d8f2d1732bb405 79 SUPERFAMILY SSF46955 17 65 2.2E-6 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_07670 a6522e03723b7983e7d8f2d1732bb405 79 Pfam PF12728 Helix-turn-helix domain 17 67 6.9E-7 T 31-10-2018 DY252_05120 d3c1c484fc79ac438aa69dabc6f62c01 294 SUPERFAMILY SSF53850 91 285 2.53E-24 T 31-10-2018 DY252_05120 d3c1c484fc79ac438aa69dabc6f62c01 294 Gene3D G3DSA:1.10.10.10 1 81 2.1E-16 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_05120 d3c1c484fc79ac438aa69dabc6f62c01 294 SUPERFAMILY SSF46785 2 78 4.53E-16 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_05120 d3c1c484fc79ac438aa69dabc6f62c01 294 Pfam PF03466 LysR substrate binding domain 93 283 1.9E-19 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_05120 d3c1c484fc79ac438aa69dabc6f62c01 294 Gene3D G3DSA:3.40.190.290 95 285 5.0E-17 T 31-10-2018 DY252_05120 d3c1c484fc79ac438aa69dabc6f62c01 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.9E-15 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_01880 711c86d9a21b389928f0773839fa49c6 323 Pfam PF00571 CBS domain 267 320 8.7E-8 T 31-10-2018 IPR000644 CBS domain DY252_01880 711c86d9a21b389928f0773839fa49c6 323 Pfam PF00571 CBS domain 214 259 4.7E-6 T 31-10-2018 IPR000644 CBS domain DY252_01880 711c86d9a21b389928f0773839fa49c6 323 SMART SM00116 274 322 1.0 T 31-10-2018 IPR000644 CBS domain DY252_01880 711c86d9a21b389928f0773839fa49c6 323 SMART SM00116 211 259 0.0037 T 31-10-2018 IPR000644 CBS domain DY252_01880 711c86d9a21b389928f0773839fa49c6 323 SUPERFAMILY SSF53697 11 323 1.0E-64 T 31-10-2018 DY252_01880 711c86d9a21b389928f0773839fa49c6 323 Pfam PF01380 SIS domain 47 173 3.9E-31 T 31-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DY252_01880 711c86d9a21b389928f0773839fa49c6 323 PIRSF PIRSF004692 2 323 1.3E-127 T 31-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 DY252_01880 711c86d9a21b389928f0773839fa49c6 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 47 313 8.2E-93 T 31-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 DY252_01880 711c86d9a21b389928f0773839fa49c6 323 Gene3D G3DSA:3.40.50.10490 6 197 5.8E-61 T 31-10-2018 DY252_01880 711c86d9a21b389928f0773839fa49c6 323 Gene3D G3DSA:3.10.580.10 198 320 2.1E-39 T 31-10-2018 DY252_01165 dd08671e257f1d71545b38fa89813960 359 SUPERFAMILY SSF50331 237 356 3.68E-22 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_01165 dd08671e257f1d71545b38fa89813960 359 Gene3D G3DSA:3.40.50.300 4 221 3.3E-67 T 31-10-2018 DY252_01165 dd08671e257f1d71545b38fa89813960 359 Pfam PF08402 TOBE domain 282 348 1.8E-5 T 31-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DY252_01165 dd08671e257f1d71545b38fa89813960 359 SUPERFAMILY SSF52540 4 242 4.32E-86 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_01165 dd08671e257f1d71545b38fa89813960 359 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_01165 dd08671e257f1d71545b38fa89813960 359 Pfam PF00005 ABC transporter 20 161 2.1E-32 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_01165 dd08671e257f1d71545b38fa89813960 359 SMART SM00382 28 211 4.1E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_01165 dd08671e257f1d71545b38fa89813960 359 Gene3D G3DSA:2.40.50.940 222 349 7.9E-29 T 31-10-2018 DY252_01165 dd08671e257f1d71545b38fa89813960 359 Gene3D G3DSA:2.40.50.140 288 340 7.9E-29 T 31-10-2018 DY252_19325 e12366bd1978c58bdd8a9b88adcd35f1 510 SUPERFAMILY SSF52540 3 220 7.52E-54 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_19325 e12366bd1978c58bdd8a9b88adcd35f1 510 Gene3D G3DSA:3.40.50.300 246 501 2.9E-42 T 31-10-2018 DY252_19325 e12366bd1978c58bdd8a9b88adcd35f1 510 Gene3D G3DSA:3.40.50.300 1 245 5.5E-54 T 31-10-2018 DY252_19325 e12366bd1978c58bdd8a9b88adcd35f1 510 SMART SM00382 29 217 4.1E-10 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_19325 e12366bd1978c58bdd8a9b88adcd35f1 510 SMART SM00382 280 473 6.4E-8 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_19325 e12366bd1978c58bdd8a9b88adcd35f1 510 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_19325 e12366bd1978c58bdd8a9b88adcd35f1 510 SUPERFAMILY SSF52540 270 476 1.31E-43 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_19325 e12366bd1978c58bdd8a9b88adcd35f1 510 Pfam PF00005 ABC transporter 271 425 1.3E-20 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_19325 e12366bd1978c58bdd8a9b88adcd35f1 510 Pfam PF00005 ABC transporter 20 169 1.6E-25 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_05760 731ce8c76215d0bf91455ec8018d1355 335 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 6 323 2.1E-95 T 31-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid DY252_05760 731ce8c76215d0bf91455ec8018d1355 335 Pfam PF05125 Phage major capsid protein, P2 family 8 325 3.3E-131 T 31-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid DY252_20450 dcecffa698267c43aafd7279e851ac1f 360 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 180 344 9.9E-51 T 31-10-2018 IPR000160 GGDEF domain DY252_20450 dcecffa698267c43aafd7279e851ac1f 360 Gene3D G3DSA:3.30.70.270 170 346 2.3E-55 T 31-10-2018 DY252_20450 dcecffa698267c43aafd7279e851ac1f 360 Pfam PF00990 Diguanylate cyclase, GGDEF domain 183 341 8.1E-48 T 31-10-2018 IPR000160 GGDEF domain DY252_20450 dcecffa698267c43aafd7279e851ac1f 360 SUPERFAMILY SSF55073 188 345 6.83E-47 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_20450 dcecffa698267c43aafd7279e851ac1f 360 SMART SM00267 172 346 1.9E-58 T 31-10-2018 IPR000160 GGDEF domain DY252_04020 a71450b43f94644da009677ee33e4e2d 215 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 19 213 1.2E-75 T 31-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 DY252_04020 a71450b43f94644da009677ee33e4e2d 215 SUPERFAMILY SSF53335 16 185 4.3E-25 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_04020 a71450b43f94644da009677ee33e4e2d 215 Gene3D G3DSA:3.40.50.150 4 202 7.6E-22 T 31-10-2018 DY252_04020 a71450b43f94644da009677ee33e4e2d 215 Pfam PF07021 Methionine biosynthesis protein MetW 19 213 3.2E-82 T 31-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 DY252_03295 77d477cfe077ee97f06d63b3e9a97aba 119 SMART SM00418 19 98 3.8E-16 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_03295 77d477cfe077ee97f06d63b3e9a97aba 119 SUPERFAMILY SSF46785 13 102 1.17E-20 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_03295 77d477cfe077ee97f06d63b3e9a97aba 119 Gene3D G3DSA:1.10.10.10 12 119 5.1E-26 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_03295 77d477cfe077ee97f06d63b3e9a97aba 119 Pfam PF12840 Helix-turn-helix domain 20 78 1.7E-15 T 31-10-2018 DY252_03295 77d477cfe077ee97f06d63b3e9a97aba 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 1.3E-8 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_03295 77d477cfe077ee97f06d63b3e9a97aba 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 1.3E-8 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_03295 77d477cfe077ee97f06d63b3e9a97aba 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 21 36 1.3E-8 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_13490 b01f3389ec033a7943c30acaaf9f4fdf 180 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 140 156 - T 31-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13490 b01f3389ec033a7943c30acaaf9f4fdf 180 Gene3D G3DSA:3.40.50.12280 17 179 6.2E-79 T 31-10-2018 DY252_13490 b01f3389ec033a7943c30acaaf9f4fdf 180 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 33 174 8.2E-76 T 31-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13490 b01f3389ec033a7943c30acaaf9f4fdf 180 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 59 168 3.1E-23 T 31-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13490 b01f3389ec033a7943c30acaaf9f4fdf 180 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 19 173 41.337 T 31-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13490 b01f3389ec033a7943c30acaaf9f4fdf 180 SUPERFAMILY SSF56770 31 175 2.88E-66 T 31-10-2018 DY252_14000 bb48da8310ff181f503564cceb1837e9 406 Gene3D G3DSA:3.50.50.60 22 402 3.9E-70 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_14000 bb48da8310ff181f503564cceb1837e9 406 SUPERFAMILY SSF160996 210 356 1.57E-15 T 31-10-2018 DY252_14000 bb48da8310ff181f503564cceb1837e9 406 Gene3D G3DSA:2.40.30.10 206 357 3.9E-70 T 31-10-2018 DY252_14000 bb48da8310ff181f503564cceb1837e9 406 Pfam PF03486 HI0933-like protein 20 402 3.2E-97 T 31-10-2018 DY252_14000 bb48da8310ff181f503564cceb1837e9 406 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 21 402 2.0E-83 T 31-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like DY252_14000 bb48da8310ff181f503564cceb1837e9 406 SUPERFAMILY SSF51905 17 402 2.74E-38 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_14000 bb48da8310ff181f503564cceb1837e9 406 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 40 403 1.7E-153 T 31-10-2018 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 DY252_14000 bb48da8310ff181f503564cceb1837e9 406 Gene3D G3DSA:1.10.8.260 285 340 3.9E-70 T 31-10-2018 IPR023166 HI0933-like insert domain superfamily DY252_21750 ff32c6f3c22cd079c0310833d8379939 197 Gene3D G3DSA:3.40.1360.10 76 197 8.8E-43 T 31-10-2018 DY252_21750 ff32c6f3c22cd079c0310833d8379939 197 SUPERFAMILY SSF111304 4 196 4.32E-71 T 31-10-2018 IPR023627 Recombination protein RecR DY252_21750 ff32c6f3c22cd079c0310833d8379939 197 TIGRFAM TIGR00615 recR: recombination protein RecR 4 194 5.9E-67 T 31-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 DY252_21750 ff32c6f3c22cd079c0310833d8379939 197 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 94.82 T 31-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 DY252_21750 ff32c6f3c22cd079c0310833d8379939 197 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 31-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 DY252_21750 ff32c6f3c22cd079c0310833d8379939 197 Pfam PF13662 Toprim domain 80 170 6.9E-27 T 31-10-2018 IPR006171 TOPRIM domain DY252_21750 ff32c6f3c22cd079c0310833d8379939 197 Gene3D G3DSA:1.10.8.420 2 51 6.3E-11 T 31-10-2018 DY252_21750 ff32c6f3c22cd079c0310833d8379939 197 Pfam PF02132 RecR protein 41 76 6.5E-11 T 31-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger DY252_21750 ff32c6f3c22cd079c0310833d8379939 197 SMART SM00493 79 164 3.7E-5 T 31-10-2018 IPR006171 TOPRIM domain DY252_14985 9e34895d2acdf52f416e5e180065efe4 471 Gene3D G3DSA:3.40.120.10 9 154 6.1E-50 T 31-10-2018 DY252_14985 9e34895d2acdf52f416e5e180065efe4 471 SUPERFAMILY SSF53738 8 134 1.57E-37 T 31-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_14985 9e34895d2acdf52f416e5e180065efe4 471 SUPERFAMILY SSF55957 373 454 2.44E-22 T 31-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_14985 9e34895d2acdf52f416e5e180065efe4 471 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 257 4.6E-20 T 31-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_14985 9e34895d2acdf52f416e5e180065efe4 471 Gene3D G3DSA:3.40.120.10 176 253 8.5E-27 T 31-10-2018 DY252_14985 9e34895d2acdf52f416e5e180065efe4 471 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 377 454 8.7E-13 T 31-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_14985 9e34895d2acdf52f416e5e180065efe4 471 SUPERFAMILY SSF53738 261 368 5.1E-33 T 31-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_14985 9e34895d2acdf52f416e5e180065efe4 471 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 262 368 7.9E-22 T 31-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_14985 9e34895d2acdf52f416e5e180065efe4 471 Gene3D G3DSA:3.40.120.10 255 371 1.7E-37 T 31-10-2018 DY252_14985 9e34895d2acdf52f416e5e180065efe4 471 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 102 111 - T 31-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_14985 9e34895d2acdf52f416e5e180065efe4 471 SUPERFAMILY SSF53738 157 259 2.83E-25 T 31-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_14985 9e34895d2acdf52f416e5e180065efe4 471 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 15 142 1.6E-33 T 31-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_14985 9e34895d2acdf52f416e5e180065efe4 471 Gene3D G3DSA:3.30.310.50 373 460 4.9E-25 T 31-10-2018 DY252_14985 9e34895d2acdf52f416e5e180065efe4 471 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 101 115 2.4E-23 T 31-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_14985 9e34895d2acdf52f416e5e180065efe4 471 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 2.4E-23 T 31-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_14985 9e34895d2acdf52f416e5e180065efe4 471 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 237 252 2.4E-23 T 31-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_14985 9e34895d2acdf52f416e5e180065efe4 471 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 208 221 2.4E-23 T 31-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DY252_05360 541317544ee469749d3dd6b0094f0583 346 SUPERFAMILY SSF51735 138 313 3.16E-40 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_05360 541317544ee469749d3dd6b0094f0583 346 Pfam PF00107 Zinc-binding dehydrogenase 176 305 1.2E-26 T 31-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DY252_05360 541317544ee469749d3dd6b0094f0583 346 Gene3D G3DSA:3.90.180.10 1 345 4.0E-92 T 31-10-2018 DY252_05360 541317544ee469749d3dd6b0094f0583 346 SUPERFAMILY SSF50129 1 167 3.74E-50 T 31-10-2018 IPR011032 GroES-like superfamily DY252_05360 541317544ee469749d3dd6b0094f0583 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 130 1.9E-30 T 31-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DY252_05360 541317544ee469749d3dd6b0094f0583 346 SMART SM00829 11 343 8.5E-9 T 31-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DY252_05360 541317544ee469749d3dd6b0094f0583 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 31-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DY252_06285 e5c83b7620ee7625de328ea70027b4bf 588 Gene3D G3DSA:1.20.1730.10 365 572 1.9E-24 T 31-10-2018 IPR038377 Sodium/glucose symporter superfamily DY252_06285 e5c83b7620ee7625de328ea70027b4bf 588 Gene3D G3DSA:1.20.1730.10 21 330 8.2E-40 T 31-10-2018 IPR038377 Sodium/glucose symporter superfamily DY252_06285 e5c83b7620ee7625de328ea70027b4bf 588 Pfam PF00474 Sodium:solute symporter family 391 507 2.7E-17 T 31-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DY252_06285 e5c83b7620ee7625de328ea70027b4bf 588 Pfam PF00474 Sodium:solute symporter family 33 299 2.3E-36 T 31-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DY252_06285 e5c83b7620ee7625de328ea70027b4bf 588 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 579 3.7E-263 T 31-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily DY252_06285 e5c83b7620ee7625de328ea70027b4bf 588 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 489 509 - T 31-10-2018 IPR018212 Sodium/solute symporter, conserved site DY252_04100 ad14c5fe76491ae9b11e99f6c62bb2e2 787 Gene3D G3DSA:2.40.170.20 260 787 5.2E-112 T 31-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DY252_04100 ad14c5fe76491ae9b11e99f6c62bb2e2 787 Gene3D G3DSA:2.170.130.10 139 256 3.3E-25 T 31-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DY252_04100 ad14c5fe76491ae9b11e99f6c62bb2e2 787 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 152 785 5.8E-102 T 31-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DY252_04100 ad14c5fe76491ae9b11e99f6c62bb2e2 787 SUPERFAMILY SSF56935 130 787 1.18E-114 T 31-10-2018 DY252_04100 ad14c5fe76491ae9b11e99f6c62bb2e2 787 Pfam PF00593 TonB dependent receptor 331 786 1.8E-49 T 31-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DY252_04100 ad14c5fe76491ae9b11e99f6c62bb2e2 787 Gene3D G3DSA:3.55.50.30 57 127 6.9E-21 T 31-10-2018 DY252_04100 ad14c5fe76491ae9b11e99f6c62bb2e2 787 SMART SM00965 79 129 5.6E-9 T 31-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 DY252_04100 ad14c5fe76491ae9b11e99f6c62bb2e2 787 Pfam PF07715 TonB-dependent Receptor Plug Domain 150 247 2.6E-11 T 31-10-2018 IPR012910 TonB-dependent receptor, plug domain DY252_00895 79c6dba035c67dccd68137ce6ac84bd4 490 Pfam PF00294 pfkB family carbohydrate kinase 17 314 3.1E-45 T 31-10-2018 IPR011611 Carbohydrate kinase PfkB DY252_00895 79c6dba035c67dccd68137ce6ac84bd4 490 Pfam PF01467 Cytidylyltransferase-like 359 452 4.6E-15 T 31-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DY252_00895 79c6dba035c67dccd68137ce6ac84bd4 490 Gene3D G3DSA:3.40.1190.20 7 322 3.1E-108 T 31-10-2018 IPR029056 Ribokinase-like DY252_00895 79c6dba035c67dccd68137ce6ac84bd4 490 Hamap MF_01603 Bifunctional protein HldE [hldE]. 10 488 41.477 T 31-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 DY252_00895 79c6dba035c67dccd68137ce6ac84bd4 490 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 356 417 1.8E-15 T 31-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DY252_00895 79c6dba035c67dccd68137ce6ac84bd4 490 SUPERFAMILY SSF53613 18 326 7.48E-58 T 31-10-2018 IPR029056 Ribokinase-like DY252_00895 79c6dba035c67dccd68137ce6ac84bd4 490 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 346 487 1.3E-59 T 31-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 DY252_00895 79c6dba035c67dccd68137ce6ac84bd4 490 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 11 324 1.4E-113 T 31-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 DY252_00895 79c6dba035c67dccd68137ce6ac84bd4 490 Gene3D G3DSA:3.40.50.620 339 489 2.0E-36 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_00895 79c6dba035c67dccd68137ce6ac84bd4 490 SUPERFAMILY SSF52374 355 483 3.38E-23 T 31-10-2018 DY252_10915 b70f028869f638a706dcc8daff826ec4 430 Gene3D G3DSA:3.90.640.10 312 354 2.5E-20 T 31-10-2018 DY252_10915 b70f028869f638a706dcc8daff826ec4 430 Gene3D G3DSA:3.90.640.10 227 239 1.9E-25 T 31-10-2018 DY252_10915 b70f028869f638a706dcc8daff826ec4 430 Gene3D G3DSA:3.30.420.40 185 226 1.9E-25 T 31-10-2018 DY252_10915 b70f028869f638a706dcc8daff826ec4 430 Gene3D G3DSA:3.30.420.40 355 412 2.5E-20 T 31-10-2018 DY252_10915 b70f028869f638a706dcc8daff826ec4 430 SUPERFAMILY SSF53067 186 425 2.11E-33 T 31-10-2018 DY252_10915 b70f028869f638a706dcc8daff826ec4 430 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 382 396 - T 31-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DY252_10915 b70f028869f638a706dcc8daff826ec4 430 Gene3D G3DSA:3.30.420.40 5 184 1.9E-25 T 31-10-2018 DY252_10915 b70f028869f638a706dcc8daff826ec4 430 SUPERFAMILY SSF53067 4 185 4.61E-19 T 31-10-2018 DY252_10915 b70f028869f638a706dcc8daff826ec4 430 Pfam PF00012 Hsp70 protein 312 425 2.5E-14 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_10915 b70f028869f638a706dcc8daff826ec4 430 Pfam PF00012 Hsp70 protein 104 237 3.7E-8 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_05290 ab23af2442cf21f69c541d94848c6850 271 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 269 24.988 T 31-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DY252_05290 ab23af2442cf21f69c541d94848c6850 271 Gene3D G3DSA:1.10.3730.10 165 271 5.2E-38 T 31-10-2018 DY252_05290 ab23af2442cf21f69c541d94848c6850 271 Gene3D G3DSA:3.40.50.720 1 164 8.7E-43 T 31-10-2018 DY252_05290 ab23af2442cf21f69c541d94848c6850 271 SUPERFAMILY SSF51735 4 160 4.82E-28 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_05290 ab23af2442cf21f69c541d94848c6850 271 PIRSF PIRSF000193 2 271 2.5E-65 T 31-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DY252_05290 ab23af2442cf21f69c541d94848c6850 271 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 269 3.2E-76 T 31-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DY252_05290 ab23af2442cf21f69c541d94848c6850 271 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 269 9.6E-34 T 31-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DY252_05290 ab23af2442cf21f69c541d94848c6850 271 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 7 99 1.6E-11 T 31-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DY252_05290 ab23af2442cf21f69c541d94848c6850 271 SUPERFAMILY SSF48179 162 269 8.5E-32 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_07395 d5a9850c66840a6e642783468eeff4f8 361 Gene3D G3DSA:3.40.50.20 7 114 4.4E-36 T 31-10-2018 DY252_07395 d5a9850c66840a6e642783468eeff4f8 361 SUPERFAMILY SSF52440 9 107 1.58E-26 T 31-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DY252_07395 d5a9850c66840a6e642783468eeff4f8 361 SUPERFAMILY SSF56059 110 308 4.77E-64 T 31-10-2018 DY252_07395 d5a9850c66840a6e642783468eeff4f8 361 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 14 358 5.2E-118 T 31-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 DY252_07395 d5a9850c66840a6e642783468eeff4f8 361 Gene3D G3DSA:3.30.470.20 189 361 1.9E-73 T 31-10-2018 DY252_07395 d5a9850c66840a6e642783468eeff4f8 361 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 14 361 41.159 T 31-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 DY252_07395 d5a9850c66840a6e642783468eeff4f8 361 SUPERFAMILY SSF51246 312 359 5.89E-15 T 31-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DY252_07395 d5a9850c66840a6e642783468eeff4f8 361 Gene3D G3DSA:3.30.1490.20 115 188 2.0E-24 T 31-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DY252_07395 d5a9850c66840a6e642783468eeff4f8 361 Pfam PF02222 ATP-grasp domain 120 288 6.8E-57 T 31-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DY252_07395 d5a9850c66840a6e642783468eeff4f8 361 SMART SM01209 115 270 7.7E-4 T 31-10-2018 DY252_05245 392e4465d3bd69e19be540606270b780 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 239 8.5E-20 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_05245 392e4465d3bd69e19be540606270b780 242 Gene3D G3DSA:3.40.50.2300 2 132 7.6E-36 T 31-10-2018 DY252_05245 392e4465d3bd69e19be540606270b780 242 SMART SM00448 7 118 1.7E-38 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_05245 392e4465d3bd69e19be540606270b780 242 SMART SM00862 162 239 1.3E-23 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_05245 392e4465d3bd69e19be540606270b780 242 Gene3D G3DSA:1.10.10.10 137 242 2.6E-27 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_05245 392e4465d3bd69e19be540606270b780 242 SUPERFAMILY SSF52172 5 131 2.13E-39 T 31-10-2018 IPR011006 CheY-like superfamily DY252_05245 392e4465d3bd69e19be540606270b780 242 Pfam PF00072 Response regulator receiver domain 9 118 2.6E-28 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_05245 392e4465d3bd69e19be540606270b780 242 SUPERFAMILY SSF46894 137 240 1.84E-23 T 31-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DY252_18630 9b2be2b7128eb398cbaf24f919ad8407 279 Pfam PF02525 Flavodoxin-like fold 3 207 3.5E-52 T 31-10-2018 IPR003680 Flavodoxin-like fold DY252_18630 9b2be2b7128eb398cbaf24f919ad8407 279 Gene3D G3DSA:3.40.50.360 1 258 1.5E-90 T 31-10-2018 IPR029039 Flavoprotein-like superfamily DY252_18630 9b2be2b7128eb398cbaf24f919ad8407 279 SUPERFAMILY SSF52218 1 251 3.84E-65 T 31-10-2018 IPR029039 Flavoprotein-like superfamily DY252_06530 ba94663b809887270008a8dbfdec6866 182 Gene3D G3DSA:3.40.50.850 1 182 1.2E-57 T 31-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DY252_06530 ba94663b809887270008a8dbfdec6866 182 Pfam PF00857 Isochorismatase family 4 175 2.5E-36 T 31-10-2018 IPR000868 Isochorismatase-like GO:0003824 DY252_06530 ba94663b809887270008a8dbfdec6866 182 SUPERFAMILY SSF52499 2 181 6.67E-49 T 31-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DY252_17005 261ce6e42386066e794aa2c619babb41 445 Gene3D G3DSA:1.20.58.1830 10 33 9.5E-37 T 31-10-2018 DY252_17005 261ce6e42386066e794aa2c619babb41 445 Gene3D G3DSA:1.20.1330.10 295 394 1.8E-7 T 31-10-2018 DY252_17005 261ce6e42386066e794aa2c619babb41 445 SUPERFAMILY SSF64518 1 443 2.62E-62 T 31-10-2018 DY252_17005 261ce6e42386066e794aa2c619babb41 445 Pfam PF00700 Bacterial flagellin C-terminal helical region 358 443 2.4E-17 T 31-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DY252_17005 261ce6e42386066e794aa2c619babb41 445 Pfam PF00669 Bacterial flagellin N-terminal helical region 9 140 7.8E-28 T 31-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DY252_17005 261ce6e42386066e794aa2c619babb41 445 Gene3D G3DSA:1.20.1330.10 45 142 9.5E-37 T 31-10-2018 DY252_17005 261ce6e42386066e794aa2c619babb41 445 PRINTS PR00207 Flagellin signature 76 95 3.3E-14 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_17005 261ce6e42386066e794aa2c619babb41 445 PRINTS PR00207 Flagellin signature 111 134 3.3E-14 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_17005 261ce6e42386066e794aa2c619babb41 445 PRINTS PR00207 Flagellin signature 37 54 3.3E-14 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_17005 261ce6e42386066e794aa2c619babb41 445 Gene3D G3DSA:1.10.8.410 395 443 1.3E-10 T 31-10-2018 DY252_06365 77fc53acf163909aa2727f827fb75985 361 Pfam PF01966 HD domain 180 302 3.1E-16 T 31-10-2018 IPR006674 HD domain DY252_06365 77fc53acf163909aa2727f827fb75985 361 SMART SM00448 6 119 1.5E-28 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_06365 77fc53acf163909aa2727f827fb75985 361 SUPERFAMILY SSF109604 165 344 6.73E-37 T 31-10-2018 DY252_06365 77fc53acf163909aa2727f827fb75985 361 Pfam PF00072 Response regulator receiver domain 8 118 5.1E-24 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_06365 77fc53acf163909aa2727f827fb75985 361 SUPERFAMILY SSF52172 6 174 1.57E-34 T 31-10-2018 IPR011006 CheY-like superfamily DY252_06365 77fc53acf163909aa2727f827fb75985 361 Gene3D G3DSA:3.40.50.2300 4 155 6.9E-32 T 31-10-2018 DY252_06365 77fc53acf163909aa2727f827fb75985 361 SMART SM00471 175 312 1.4E-13 T 31-10-2018 IPR003607 HD/PDEase domain DY252_06365 77fc53acf163909aa2727f827fb75985 361 Gene3D G3DSA:1.10.3210.10 156 360 2.1E-63 T 31-10-2018 DY252_02545 18ca606da829817dad960eb3fe720838 152 Gene3D G3DSA:3.30.450.150 1 151 8.8E-47 T 31-10-2018 IPR038084 GlcG-like domain superfamily DY252_02545 18ca606da829817dad960eb3fe720838 152 SUPERFAMILY SSF143744 9 146 1.44E-22 T 31-10-2018 IPR038084 GlcG-like domain superfamily DY252_02545 18ca606da829817dad960eb3fe720838 152 Pfam PF03928 Haem-degrading 18 143 2.5E-27 T 31-10-2018 IPR005624 Haem-degrading DY252_02545 18ca606da829817dad960eb3fe720838 152 PIRSF PIRSF008757 1 152 9.0E-51 T 31-10-2018 IPR010371 Uncharacterised protein family UPF0303 DY252_04970 3605188f4c814615691551f35d0ac0ec 382 Pfam PF00534 Glycosyl transferases group 1 201 340 4.0E-23 T 31-10-2018 IPR001296 Glycosyl transferase, family 1 DY252_04970 3605188f4c814615691551f35d0ac0ec 382 SUPERFAMILY SSF53756 16 367 1.92E-56 T 31-10-2018 DY252_04970 3605188f4c814615691551f35d0ac0ec 382 Gene3D G3DSA:3.40.50.2000 178 354 2.6E-52 T 31-10-2018 DY252_04970 3605188f4c814615691551f35d0ac0ec 382 Pfam PF13439 Glycosyltransferase Family 4 20 182 2.7E-11 T 31-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DY252_04970 3605188f4c814615691551f35d0ac0ec 382 Gene3D G3DSA:3.40.50.2000 20 363 2.6E-52 T 31-10-2018 DY252_08670 9e28ee1266b98f62b2b52ba7cb1f93c6 262 Pfam PF12697 Alpha/beta hydrolase family 18 252 2.5E-23 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_08670 9e28ee1266b98f62b2b52ba7cb1f93c6 262 Gene3D G3DSA:3.40.50.1820 7 261 4.0E-59 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_08670 9e28ee1266b98f62b2b52ba7cb1f93c6 262 SUPERFAMILY SSF53474 3 262 2.53E-46 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_22110 940087b1efd3b1b97f59211ef4e06ebd 406 Hamap MF_00005 Argininosuccinate synthase [argG]. 5 404 52.609 T 31-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DY252_22110 940087b1efd3b1b97f59211ef4e06ebd 406 Gene3D G3DSA:3.90.1260.10 181 402 2.8E-98 T 31-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DY252_22110 940087b1efd3b1b97f59211ef4e06ebd 406 Pfam PF00764 Arginosuccinate synthase 9 397 1.6E-156 T 31-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DY252_22110 940087b1efd3b1b97f59211ef4e06ebd 406 SUPERFAMILY SSF52402 6 169 3.75E-48 T 31-10-2018 DY252_22110 940087b1efd3b1b97f59211ef4e06ebd 406 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 119 130 - T 31-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DY252_22110 940087b1efd3b1b97f59211ef4e06ebd 406 TIGRFAM TIGR00032 argG: argininosuccinate synthase 7 397 5.7E-145 T 31-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DY252_22110 940087b1efd3b1b97f59211ef4e06ebd 406 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 11 19 - T 31-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DY252_22110 940087b1efd3b1b97f59211ef4e06ebd 406 SUPERFAMILY SSF69864 179 398 5.1E-94 T 31-10-2018 DY252_22110 940087b1efd3b1b97f59211ef4e06ebd 406 Gene3D G3DSA:3.40.50.620 6 174 2.7E-68 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_19185 e5199a1105288f78c4a0ddedff38ae89 186 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 44 173 1.7E-24 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_12915 a99de07e2f34ca8f64c970c6289f4fa5 236 Gene3D G3DSA:3.40.50.300 1 235 3.2E-58 T 31-10-2018 DY252_12915 a99de07e2f34ca8f64c970c6289f4fa5 236 PIRSF PIRSF039137 1 235 1.8E-105 T 31-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 DY252_12915 a99de07e2f34ca8f64c970c6289f4fa5 236 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_12915 a99de07e2f34ca8f64c970c6289f4fa5 236 SMART SM00382 26 213 3.0E-5 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_12915 a99de07e2f34ca8f64c970c6289f4fa5 236 SUPERFAMILY SSF52540 2 232 2.55E-56 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12915 a99de07e2f34ca8f64c970c6289f4fa5 236 Pfam PF00005 ABC transporter 17 161 1.2E-28 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_16255 f3aca28b0f61d08159d237edb8357cb8 258 Pfam PF00005 ABC transporter 20 169 3.2E-34 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_16255 f3aca28b0f61d08159d237edb8357cb8 258 SMART SM00382 29 217 4.1E-18 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_16255 f3aca28b0f61d08159d237edb8357cb8 258 SUPERFAMILY SSF52540 4 233 6.66E-62 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_16255 f3aca28b0f61d08159d237edb8357cb8 258 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_16255 f3aca28b0f61d08159d237edb8357cb8 258 Gene3D G3DSA:3.40.50.300 1 256 1.4E-68 T 31-10-2018 DY252_13090 c1c6433791b99e9df4ea69f90d722e46 714 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 708 1.1E-220 T 31-10-2018 IPR004811 RelA/SpoT family GO:0015969 DY252_13090 c1c6433791b99e9df4ea69f90d722e46 714 Gene3D G3DSA:3.30.460.10 196 326 6.7E-45 T 31-10-2018 DY252_13090 c1c6433791b99e9df4ea69f90d722e46 714 Gene3D G3DSA:3.10.20.30 383 456 1.6E-31 T 31-10-2018 IPR012675 Beta-grasp domain superfamily DY252_13090 c1c6433791b99e9df4ea69f90d722e46 714 Gene3D G3DSA:1.10.3210.10 1 192 1.4E-75 T 31-10-2018 DY252_13090 c1c6433791b99e9df4ea69f90d722e46 714 SUPERFAMILY SSF55021 641 711 1.72E-7 T 31-10-2018 DY252_13090 c1c6433791b99e9df4ea69f90d722e46 714 SUPERFAMILY SSF81301 182 393 7.03E-60 T 31-10-2018 DY252_13090 c1c6433791b99e9df4ea69f90d722e46 714 SUPERFAMILY SSF81271 376 449 1.22E-21 T 31-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DY252_13090 c1c6433791b99e9df4ea69f90d722e46 714 Gene3D G3DSA:3.30.70.260 636 714 5.9E-11 T 31-10-2018 DY252_13090 c1c6433791b99e9df4ea69f90d722e46 714 SMART SM00954 236 346 2.2E-62 T 31-10-2018 IPR007685 RelA/SpoT GO:0015969 DY252_13090 c1c6433791b99e9df4ea69f90d722e46 714 Pfam PF02824 TGS domain 390 448 1.2E-19 T 31-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DY252_13090 c1c6433791b99e9df4ea69f90d722e46 714 SMART SM00471 41 153 3.8E-8 T 31-10-2018 IPR003607 HD/PDEase domain DY252_13090 c1c6433791b99e9df4ea69f90d722e46 714 Pfam PF04607 Region found in RelA / SpoT proteins 236 345 1.1E-36 T 31-10-2018 IPR007685 RelA/SpoT GO:0015969 DY252_13090 c1c6433791b99e9df4ea69f90d722e46 714 Pfam PF13328 HD domain 26 176 3.3E-49 T 31-10-2018 IPR003607 HD/PDEase domain DY252_13090 c1c6433791b99e9df4ea69f90d722e46 714 SUPERFAMILY SSF109604 6 191 2.26E-68 T 31-10-2018 DY252_13090 c1c6433791b99e9df4ea69f90d722e46 714 Pfam PF13291 ACT domain 635 711 1.6E-16 T 31-10-2018 IPR002912 ACT domain DY252_04205 e3a4389315b42379f37a4fbb7c743c5c 555 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 511 530 - T 31-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DY252_04205 e3a4389315b42379f37a4fbb7c743c5c 555 Gene3D G3DSA:1.10.540.10 166 284 1.5E-34 T 31-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DY252_04205 e3a4389315b42379f37a4fbb7c743c5c 555 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 172 283 3.0E-31 T 31-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DY252_04205 e3a4389315b42379f37a4fbb7c743c5c 555 Gene3D G3DSA:1.20.140.10 410 554 2.3E-38 T 31-10-2018 DY252_04205 e3a4389315b42379f37a4fbb7c743c5c 555 SUPERFAMILY SSF56645 171 415 4.58E-68 T 31-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DY252_04205 e3a4389315b42379f37a4fbb7c743c5c 555 SUPERFAMILY SSF47203 402 553 2.9E-42 T 31-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DY252_04205 e3a4389315b42379f37a4fbb7c743c5c 555 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 290 389 1.2E-17 T 31-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DY252_04205 e3a4389315b42379f37a4fbb7c743c5c 555 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 404 552 2.7E-34 T 31-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DY252_04205 e3a4389315b42379f37a4fbb7c743c5c 555 Gene3D G3DSA:2.40.110.10 287 409 1.7E-30 T 31-10-2018 DY252_18615 52730970a40486ed91c0c755b8522de4 588 SUPERFAMILY SSF51120 239 344 3.01E-14 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18615 52730970a40486ed91c0c755b8522de4 588 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 253 268 0.098 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18615 52730970a40486ed91c0c755b8522de4 588 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 130 138 62.0 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18615 52730970a40486ed91c0c755b8522de4 588 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 361 378 0.011 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18615 52730970a40486ed91c0c755b8522de4 588 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 236 252 0.06 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18615 52730970a40486ed91c0c755b8522de4 588 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 308 324 4.5 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18615 52730970a40486ed91c0c755b8522de4 588 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 416 432 1.9 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18615 52730970a40486ed91c0c755b8522de4 588 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 433 450 4.3 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18615 52730970a40486ed91c0c755b8522de4 588 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 451 466 17.0 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18615 52730970a40486ed91c0c755b8522de4 588 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 470 481 14.0 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18615 52730970a40486ed91c0c755b8522de4 588 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 329 342 0.02 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18615 52730970a40486ed91c0c755b8522de4 588 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 23 37 0.75 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18615 52730970a40486ed91c0c755b8522de4 588 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 348 358 20.0 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18615 52730970a40486ed91c0c755b8522de4 588 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 218 229 42.0 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18615 52730970a40486ed91c0c755b8522de4 588 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 379 396 2.8 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18615 52730970a40486ed91c0c755b8522de4 588 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 430 448 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_18615 52730970a40486ed91c0c755b8522de4 588 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 250 268 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_18615 52730970a40486ed91c0c755b8522de4 588 Gene3D G3DSA:2.150.10.10 414 580 2.6E-15 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18615 52730970a40486ed91c0c755b8522de4 588 SUPERFAMILY SSF51120 113 268 1.96E-11 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18615 52730970a40486ed91c0c755b8522de4 588 SUPERFAMILY SSF51120 409 506 5.89E-15 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18615 52730970a40486ed91c0c755b8522de4 588 Gene3D G3DSA:2.150.10.10 349 409 3.5E-8 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18615 52730970a40486ed91c0c755b8522de4 588 Gene3D G3DSA:2.150.10.10 303 344 5.4E-8 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18615 52730970a40486ed91c0c755b8522de4 588 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 241 259 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_18615 52730970a40486ed91c0c755b8522de4 588 Gene3D G3DSA:2.150.10.10 214 299 1.2E-10 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18615 52730970a40486ed91c0c755b8522de4 588 PRINTS PR00313 NodO calcium binding signature 332 343 5.4E-9 T 31-10-2018 DY252_18615 52730970a40486ed91c0c755b8522de4 588 PRINTS PR00313 NodO calcium binding signature 416 425 5.4E-9 T 31-10-2018 DY252_18615 52730970a40486ed91c0c755b8522de4 588 PRINTS PR00313 NodO calcium binding signature 389 397 5.4E-9 T 31-10-2018 DY252_18615 52730970a40486ed91c0c755b8522de4 588 PRINTS PR00313 NodO calcium binding signature 371 379 5.4E-9 T 31-10-2018 DY252_18615 52730970a40486ed91c0c755b8522de4 588 Gene3D G3DSA:2.150.10.10 1 91 3.4E-8 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18615 52730970a40486ed91c0c755b8522de4 588 SUPERFAMILY SSF51120 4 54 1.7E-7 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18615 52730970a40486ed91c0c755b8522de4 588 SUPERFAMILY SSF51120 346 400 1.69E-9 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18615 52730970a40486ed91c0c755b8522de4 588 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 439 457 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_18615 52730970a40486ed91c0c755b8522de4 588 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 448 466 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_18430 097341f4e498b20928762676c3da3d6e 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 14.829 T 31-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_18430 097341f4e498b20928762676c3da3d6e 44 Pfam PF00468 Ribosomal protein L34 2 44 2.6E-21 T 31-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_18430 097341f4e498b20928762676c3da3d6e 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 2 44 1.3E-20 T 31-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_18430 097341f4e498b20928762676c3da3d6e 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 31-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_18430 097341f4e498b20928762676c3da3d6e 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 4.0E-12 T 31-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1068 12.999 T 31-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 SUPERFAMILY SSF56059 128 400 2.12E-105 T 31-10-2018 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 716 730 - T 31-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 SUPERFAMILY SSF52440 559 682 2.01E-45 T 31-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 Gene3D G3DSA:3.40.50.20 1 116 5.8E-49 T 31-10-2018 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 SUPERFAMILY SSF48108 395 547 1.7E-43 T 31-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.9E-61 T 31-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 6.9E-61 T 31-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.9E-61 T 31-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.9E-61 T 31-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.9E-61 T 31-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.9E-61 T 31-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.9E-61 T 31-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1075 13.466 T 31-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 SUPERFAMILY SSF52440 1 127 8.78E-48 T 31-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 Gene3D G3DSA:3.30.470.20 672 941 5.9E-113 T 31-10-2018 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 Gene3D G3DSA:3.40.50.20 556 669 3.8E-46 T 31-10-2018 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 Gene3D G3DSA:3.30.470.20 120 402 5.1E-125 T 31-10-2018 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 680 881 7.4E-37 T 31-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 2.3E-70 T 31-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 SMART SM01096 422 544 2.9E-62 T 31-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 31-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 845 852 - T 31-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 Pfam PF02142 MGS-like domain 962 1047 3.3E-20 T 31-10-2018 IPR011607 Methylglyoxal synthase-like domain DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1058 0.0 T 31-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 SMART SM00851 961 1047 1.5E-32 T 31-10-2018 IPR011607 Methylglyoxal synthase-like domain DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 425 544 2.8E-37 T 31-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 SUPERFAMILY SSF56059 680 939 7.07E-102 T 31-10-2018 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 SUPERFAMILY SSF52335 941 1077 4.32E-40 T 31-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 Gene3D G3DSA:1.10.1030.10 403 548 7.1E-40 T 31-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_05535 6c8ca6a4f175305c93f800800ae2ad37 1080 Gene3D G3DSA:3.40.50.1380 942 1078 6.0E-38 T 31-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DY252_04145 8959a9a9737740f1a64898c62d5c8767 249 Gene3D G3DSA:3.40.50.620 1 247 2.5E-91 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_04145 8959a9a9737740f1a64898c62d5c8767 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 31-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 DY252_04145 8959a9a9737740f1a64898c62d5c8767 249 PIRSF PIRSF000090 1 249 3.1E-88 T 31-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 DY252_04145 8959a9a9737740f1a64898c62d5c8767 249 SMART SM00893 23 211 6.1E-73 T 31-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DY252_04145 8959a9a9737740f1a64898c62d5c8767 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 1.3E-49 T 31-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DY252_04145 8959a9a9737740f1a64898c62d5c8767 249 SUPERFAMILY SSF52402 1 242 4.05E-89 T 31-10-2018 DY252_02340 ed9da7d20abf333f2800273852d48599 274 Pfam PF00005 ABC transporter 18 153 3.6E-24 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_02340 ed9da7d20abf333f2800273852d48599 274 SUPERFAMILY SSF52540 8 245 3.93E-53 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_02340 ed9da7d20abf333f2800273852d48599 274 SMART SM00382 27 233 1.3E-10 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_02340 ed9da7d20abf333f2800273852d48599 274 Gene3D G3DSA:3.40.50.300 1 268 4.5E-65 T 31-10-2018 DY252_20305 b80ea472093b2ed50499e210ee16d2cf 141 SUPERFAMILY SSF55811 20 126 1.49E-22 T 31-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DY252_20305 b80ea472093b2ed50499e210ee16d2cf 141 Pfam PF00293 NUDIX domain 23 124 2.3E-14 T 31-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DY252_20305 b80ea472093b2ed50499e210ee16d2cf 141 PRINTS PR00502 NUDIX hydrolase family signature 41 55 2.6E-6 T 31-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DY252_20305 b80ea472093b2ed50499e210ee16d2cf 141 PRINTS PR00502 NUDIX hydrolase family signature 55 70 2.6E-6 T 31-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DY252_20305 b80ea472093b2ed50499e210ee16d2cf 141 ProSitePatterns PS00893 Nudix box signature. 46 67 - T 31-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DY252_20305 b80ea472093b2ed50499e210ee16d2cf 141 Gene3D G3DSA:3.90.79.10 9 140 2.2E-22 T 31-10-2018 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 256 270 9.2E-67 T 31-10-2018 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 9.2E-67 T 31-10-2018 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 400 415 9.2E-67 T 31-10-2018 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 9.2E-67 T 31-10-2018 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 9.2E-67 T 31-10-2018 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 422 442 9.2E-67 T 31-10-2018 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 136 145 9.2E-67 T 31-10-2018 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 9.2E-67 T 31-10-2018 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 9.2E-67 T 31-10-2018 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 SUPERFAMILY SSF51905 2 365 4.05E-57 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 4 448 4.3E-202 T 31-10-2018 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 6.5E-30 T 31-10-2018 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 271 6.5E-30 T 31-10-2018 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.5E-30 T 31-10-2018 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 151 6.5E-30 T 31-10-2018 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 6.5E-30 T 31-10-2018 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 Gene3D G3DSA:3.50.50.60 6 319 3.4E-113 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 31-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 PIRSF PIRSF000350 1 443 1.3E-87 T 31-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 Gene3D G3DSA:3.50.50.60 145 262 3.4E-113 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 Gene3D G3DSA:3.30.390.30 338 452 1.8E-46 T 31-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 SUPERFAMILY SSF55424 336 449 1.53E-37 T 31-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 447 3.1E-36 T 31-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DY252_18000 e942f1bbeb46296fa3de9ad3940471e5 453 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 319 1.4E-68 T 31-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DY252_16875 c87c12c5e1390f2b75174a16a61a3956 339 Gene3D G3DSA:3.90.180.10 14 334 4.7E-90 T 31-10-2018 DY252_16875 c87c12c5e1390f2b75174a16a61a3956 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 105 3.7E-7 T 31-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DY252_16875 c87c12c5e1390f2b75174a16a61a3956 339 Gene3D G3DSA:3.40.50.720 142 287 4.7E-90 T 31-10-2018 DY252_16875 c87c12c5e1390f2b75174a16a61a3956 339 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 173 194 - T 31-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 DY252_16875 c87c12c5e1390f2b75174a16a61a3956 339 SUPERFAMILY SSF51735 131 303 3.65E-30 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_16875 c87c12c5e1390f2b75174a16a61a3956 339 Pfam PF13602 Zinc-binding dehydrogenase 215 334 2.3E-23 T 31-10-2018 DY252_16875 c87c12c5e1390f2b75174a16a61a3956 339 SMART SM00829 15 336 1.1E-12 T 31-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DY252_16875 c87c12c5e1390f2b75174a16a61a3956 339 SUPERFAMILY SSF50129 4 195 6.54E-35 T 31-10-2018 IPR011032 GroES-like superfamily DY252_07490 dfb87735298eeff6e55da0126a111e2d 598 Pfam PF00005 ABC transporter 373 522 4.6E-33 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_07490 dfb87735298eeff6e55da0126a111e2d 598 Gene3D G3DSA:3.40.50.300 349 597 1.3E-91 T 31-10-2018 DY252_07490 dfb87735298eeff6e55da0126a111e2d 598 SUPERFAMILY SSF90123 26 341 1.22E-73 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_07490 dfb87735298eeff6e55da0126a111e2d 598 SUPERFAMILY SSF52540 344 593 2.83E-89 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07490 dfb87735298eeff6e55da0126a111e2d 598 Gene3D G3DSA:1.20.1560.10 18 344 1.4E-83 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_07490 dfb87735298eeff6e55da0126a111e2d 598 Pfam PF00664 ABC transporter transmembrane region 40 307 1.7E-50 T 31-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DY252_07490 dfb87735298eeff6e55da0126a111e2d 598 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 19 593 9.5E-269 T 31-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein DY252_07490 dfb87735298eeff6e55da0126a111e2d 598 ProSitePatterns PS00211 ABC transporters family signature. 494 508 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_07490 dfb87735298eeff6e55da0126a111e2d 598 SMART SM00382 382 568 1.5E-18 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_19770 637ff179e82377a2fe7b5ea2f3dd552e 587 Gene3D G3DSA:3.40.190.10 393 513 1.8E-22 T 31-10-2018 DY252_19770 637ff179e82377a2fe7b5ea2f3dd552e 587 SMART SM00283 23 282 6.9E-5 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_19770 637ff179e82377a2fe7b5ea2f3dd552e 587 SUPERFAMILY SSF53850 295 551 2.34E-29 T 31-10-2018 DY252_19770 637ff179e82377a2fe7b5ea2f3dd552e 587 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 113 244 3.0E-24 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_19770 637ff179e82377a2fe7b5ea2f3dd552e 587 Gene3D G3DSA:1.10.287.950 4 287 6.4E-35 T 31-10-2018 DY252_19770 637ff179e82377a2fe7b5ea2f3dd552e 587 SMART SM00062 303 551 2.4E-15 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_19770 637ff179e82377a2fe7b5ea2f3dd552e 587 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 304 549 5.6E-17 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_19770 637ff179e82377a2fe7b5ea2f3dd552e 587 SUPERFAMILY SSF58104 12 259 1.96E-31 T 31-10-2018 DY252_19770 637ff179e82377a2fe7b5ea2f3dd552e 587 Gene3D G3DSA:3.40.190.10 301 547 1.8E-22 T 31-10-2018 DY252_17620 7cdf51af1f8981a80a58e28d27b51a5b 446 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 140 1.4E-29 T 31-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DY252_17620 7cdf51af1f8981a80a58e28d27b51a5b 446 Gene3D G3DSA:1.20.1330.10 45 143 6.5E-37 T 31-10-2018 DY252_17620 7cdf51af1f8981a80a58e28d27b51a5b 446 Gene3D G3DSA:1.20.1330.10 275 396 3.4E-10 T 31-10-2018 DY252_17620 7cdf51af1f8981a80a58e28d27b51a5b 446 Gene3D G3DSA:1.10.8.410 397 446 5.9E-21 T 31-10-2018 DY252_17620 7cdf51af1f8981a80a58e28d27b51a5b 446 PRINTS PR00207 Flagellin signature 37 54 5.9E-16 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_17620 7cdf51af1f8981a80a58e28d27b51a5b 446 PRINTS PR00207 Flagellin signature 111 134 5.9E-16 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_17620 7cdf51af1f8981a80a58e28d27b51a5b 446 PRINTS PR00207 Flagellin signature 76 95 5.9E-16 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_17620 7cdf51af1f8981a80a58e28d27b51a5b 446 Gene3D G3DSA:1.20.58.1830 6 33 6.5E-37 T 31-10-2018 DY252_17620 7cdf51af1f8981a80a58e28d27b51a5b 446 SUPERFAMILY SSF64518 1 446 1.96E-66 T 31-10-2018 DY252_17620 7cdf51af1f8981a80a58e28d27b51a5b 446 Pfam PF00700 Bacterial flagellin C-terminal helical region 361 445 3.4E-22 T 31-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DY252_03235 57bb2c61b7fcaf8ff19cc3752939ede1 609 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 315 605 3.4E-126 T 31-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type DY252_03235 57bb2c61b7fcaf8ff19cc3752939ede1 609 Pfam PF02653 Branched-chain amino acid transport system / permease component 319 591 5.5E-52 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_04305 9ed63df1634c37eba7e46481522112a0 283 SUPERFAMILY SSF81464 24 123 1.13E-30 T 31-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04305 9ed63df1634c37eba7e46481522112a0 283 Gene3D G3DSA:1.10.287.90 30 124 9.1E-33 T 31-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04305 9ed63df1634c37eba7e46481522112a0 283 Gene3D G3DSA:2.60.40.420 126 265 8.9E-53 T 31-10-2018 IPR008972 Cupredoxin DY252_04305 9ed63df1634c37eba7e46481522112a0 283 PRINTS PR01166 Cytochrome c oxidase subunit II signature 193 213 3.1E-39 T 31-10-2018 DY252_04305 9ed63df1634c37eba7e46481522112a0 283 PRINTS PR01166 Cytochrome c oxidase subunit II signature 103 123 3.1E-39 T 31-10-2018 DY252_04305 9ed63df1634c37eba7e46481522112a0 283 PRINTS PR01166 Cytochrome c oxidase subunit II signature 169 190 3.1E-39 T 31-10-2018 DY252_04305 9ed63df1634c37eba7e46481522112a0 283 PRINTS PR01166 Cytochrome c oxidase subunit II signature 125 144 3.1E-39 T 31-10-2018 DY252_04305 9ed63df1634c37eba7e46481522112a0 283 PRINTS PR01166 Cytochrome c oxidase subunit II signature 91 103 3.1E-39 T 31-10-2018 DY252_04305 9ed63df1634c37eba7e46481522112a0 283 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 31 117 8.2E-22 T 31-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04305 9ed63df1634c37eba7e46481522112a0 283 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 194 245 - T 31-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04305 9ed63df1634c37eba7e46481522112a0 283 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 47 261 3.6E-55 T 31-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04305 9ed63df1634c37eba7e46481522112a0 283 SUPERFAMILY SSF49503 126 266 4.36E-48 T 31-10-2018 IPR008972 Cupredoxin DY252_04305 9ed63df1634c37eba7e46481522112a0 283 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 129 252 7.0E-50 T 31-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_03780 1241019b3184381a6aa41e09f43359b0 627 Pfam PF14559 Tetratricopeptide repeat 120 178 2.8E-7 T 31-10-2018 DY252_03780 1241019b3184381a6aa41e09f43359b0 627 Pfam PF13424 Tetratricopeptide repeat 39 100 4.9E-8 T 31-10-2018 DY252_03780 1241019b3184381a6aa41e09f43359b0 627 SUPERFAMILY SSF48452 114 454 9.48E-12 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_03780 1241019b3184381a6aa41e09f43359b0 627 Gene3D G3DSA:3.40.50.11380 248 598 2.8E-139 T 31-10-2018 DY252_03780 1241019b3184381a6aa41e09f43359b0 627 Gene3D G3DSA:1.25.40.10 141 236 2.1E-9 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_03780 1241019b3184381a6aa41e09f43359b0 627 Gene3D G3DSA:1.25.40.10 2 138 1.4E-29 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_03780 1241019b3184381a6aa41e09f43359b0 627 Gene3D G3DSA:3.40.50.2000 413 592 2.8E-139 T 31-10-2018 DY252_03780 1241019b3184381a6aa41e09f43359b0 627 SMART SM00028 107 140 0.34 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_03780 1241019b3184381a6aa41e09f43359b0 627 SMART SM00028 39 72 2.7E-5 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_03780 1241019b3184381a6aa41e09f43359b0 627 SMART SM00028 73 106 2.6E-4 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_03780 1241019b3184381a6aa41e09f43359b0 627 SMART SM00028 141 174 0.0027 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_03780 1241019b3184381a6aa41e09f43359b0 627 SUPERFAMILY SSF48452 7 177 1.52E-35 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_03780 1241019b3184381a6aa41e09f43359b0 627 Pfam PF13844 Glycosyl transferase family 41 256 402 9.7E-32 T 31-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 DY252_03780 1241019b3184381a6aa41e09f43359b0 627 Pfam PF13844 Glycosyl transferase family 41 415 609 2.6E-55 T 31-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 DY252_05075 59b90ac5324c72dfd9100aa436b71394 324 Pfam PF07670 Nucleoside recognition 17 116 1.6E-5 T 31-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DY252_03015 35942f84ed556923bd6abb93e2f8f502 395 Gene3D G3DSA:3.40.47.10 8 278 3.4E-140 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_03015 35942f84ed556923bd6abb93e2f8f502 395 Pfam PF02803 Thiolase, C-terminal domain 272 393 5.4E-44 T 31-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DY252_03015 35942f84ed556923bd6abb93e2f8f502 395 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 393 1.5E-123 T 31-10-2018 IPR002155 Thiolase GO:0016747 DY252_03015 35942f84ed556923bd6abb93e2f8f502 395 SUPERFAMILY SSF53901 7 272 7.77E-74 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_03015 35942f84ed556923bd6abb93e2f8f502 395 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 31-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DY252_03015 35942f84ed556923bd6abb93e2f8f502 395 PIRSF PIRSF000429 1 395 6.6E-113 T 31-10-2018 IPR002155 Thiolase GO:0016747 DY252_03015 35942f84ed556923bd6abb93e2f8f502 395 SUPERFAMILY SSF53901 273 394 1.18E-41 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_03015 35942f84ed556923bd6abb93e2f8f502 395 Pfam PF00108 Thiolase, N-terminal domain 7 264 1.7E-84 T 31-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DY252_03015 35942f84ed556923bd6abb93e2f8f502 395 Gene3D G3DSA:3.40.47.10 129 392 3.4E-140 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_03015 35942f84ed556923bd6abb93e2f8f502 395 ProSitePatterns PS00099 Thiolases active site. 376 389 - T 31-10-2018 IPR020610 Thiolase, active site GO:0016747 DY252_01835 718b449fc7ffde03cc7dfd47937d075d 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 136 2.5E-23 T 31-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DY252_01835 718b449fc7ffde03cc7dfd47937d075d 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 31-10-2018 IPR018336 Ribonuclease PH, conserved site DY252_01835 718b449fc7ffde03cc7dfd47937d075d 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 42.236 T 31-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 DY252_01835 718b449fc7ffde03cc7dfd47937d075d 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 2.4E-106 T 31-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 DY252_01835 718b449fc7ffde03cc7dfd47937d075d 238 Gene3D G3DSA:3.30.230.70 10 237 7.4E-57 T 31-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DY252_01835 718b449fc7ffde03cc7dfd47937d075d 238 SUPERFAMILY SSF54211 1 181 8.1E-42 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_01835 718b449fc7ffde03cc7dfd47937d075d 238 SUPERFAMILY SSF55666 152 236 3.67E-22 T 31-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DY252_01835 718b449fc7ffde03cc7dfd47937d075d 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 224 8.5E-9 T 31-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DY252_00175 a86a455082b7443937e6a88513384810 277 Gene3D G3DSA:1.10.3720.10 62 267 4.5E-23 T 31-10-2018 IPR035906 MetI-like superfamily DY252_00175 a86a455082b7443937e6a88513384810 277 SUPERFAMILY SSF161098 68 257 2.35E-30 T 31-10-2018 IPR035906 MetI-like superfamily DY252_00175 a86a455082b7443937e6a88513384810 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 272 7.3E-30 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_00175 a86a455082b7443937e6a88513384810 277 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 1 38 2.2E-8 T 31-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DY252_18485 bb65ff277070955002ed9bd8dd6339fe 566 Pfam PF05227 CHASE3 domain 42 182 2.8E-38 T 31-10-2018 IPR007891 CHASE3 DY252_18485 bb65ff277070955002ed9bd8dd6339fe 566 Gene3D G3DSA:1.10.287.950 293 566 3.1E-54 T 31-10-2018 DY252_18485 bb65ff277070955002ed9bd8dd6339fe 566 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 368 531 4.9E-34 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_18485 bb65ff277070955002ed9bd8dd6339fe 566 SMART SM00283 312 559 4.1E-43 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_18485 bb65ff277070955002ed9bd8dd6339fe 566 Gene3D G3DSA:1.20.1480.50 179 274 1.9E-17 T 31-10-2018 DY252_18485 bb65ff277070955002ed9bd8dd6339fe 566 SUPERFAMILY SSF58104 241 558 2.35E-60 T 31-10-2018 DY252_18485 bb65ff277070955002ed9bd8dd6339fe 566 Gene3D G3DSA:1.20.1440.210 48 178 7.9E-34 T 31-10-2018 DY252_18485 bb65ff277070955002ed9bd8dd6339fe 566 SMART SM00304 215 268 6.1E-7 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_18485 bb65ff277070955002ed9bd8dd6339fe 566 SMART SM00304 297 350 94.0 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_18485 bb65ff277070955002ed9bd8dd6339fe 566 Pfam PF00672 HAMP domain 217 255 2.1E-8 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_12580 2f2e6dcbf636d16874fc4429f1220f9e 221 SMART SM00448 1 112 2.4E-40 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_12580 2f2e6dcbf636d16874fc4429f1220f9e 221 SUPERFAMILY SSF52172 1 174 7.97E-39 T 31-10-2018 IPR011006 CheY-like superfamily DY252_12580 2f2e6dcbf636d16874fc4429f1220f9e 221 Gene3D G3DSA:1.10.10.10 119 221 5.5E-25 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_12580 2f2e6dcbf636d16874fc4429f1220f9e 221 Gene3D G3DSA:3.40.50.2300 1 118 9.0E-39 T 31-10-2018 DY252_12580 2f2e6dcbf636d16874fc4429f1220f9e 221 Pfam PF00072 Response regulator receiver domain 3 112 1.2E-28 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_12580 2f2e6dcbf636d16874fc4429f1220f9e 221 SMART SM00862 145 218 3.1E-17 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_12580 2f2e6dcbf636d16874fc4429f1220f9e 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 7.8E-19 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_19810 fb019a25f776a2c9ac8a4073e1fa3e60 530 PIRSF PIRSF001492 7 520 5.3E-198 T 31-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_19810 fb019a25f776a2c9ac8a4073e1fa3e60 530 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 91 304 1.9E-68 T 31-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_19810 fb019a25f776a2c9ac8a4073e1fa3e60 530 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 14 518 6.9E-197 T 31-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_19810 fb019a25f776a2c9ac8a4073e1fa3e60 530 SUPERFAMILY SSF64158 86 308 3.01E-72 T 31-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_19810 fb019a25f776a2c9ac8a4073e1fa3e60 530 Gene3D G3DSA:3.40.720.10 14 516 8.8E-199 T 31-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DY252_19810 fb019a25f776a2c9ac8a4073e1fa3e60 530 Pfam PF01676 Metalloenzyme superfamily 14 507 7.3E-76 T 31-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 DY252_19810 fb019a25f776a2c9ac8a4073e1fa3e60 530 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 13 519 47.319 T 31-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_19810 fb019a25f776a2c9ac8a4073e1fa3e60 530 SUPERFAMILY SSF53649 13 518 2.49E-72 T 31-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DY252_19810 fb019a25f776a2c9ac8a4073e1fa3e60 530 Gene3D G3DSA:3.40.1450.10 86 319 8.8E-199 T 31-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_15475 1ab110703feba11c85161cd549dc2fe1 370 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 319 3.0E-40 T 31-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DY252_15475 1ab110703feba11c85161cd549dc2fe1 370 Gene3D G3DSA:3.40.50.1100 25 326 2.2E-66 T 31-10-2018 DY252_15475 1ab110703feba11c85161cd549dc2fe1 370 SUPERFAMILY SSF53686 23 339 2.62E-67 T 31-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DY252_15475 1ab110703feba11c85161cd549dc2fe1 370 Gene3D G3DSA:3.40.50.1100 51 157 2.2E-66 T 31-10-2018 DY252_21385 61f98ce005a642bb1214b16b0912a06d 396 Pfam PF06114 IrrE N-terminal-like domain 178 294 1.2E-11 T 31-10-2018 IPR010359 IrrE N-terminal-like domain DY252_21385 61f98ce005a642bb1214b16b0912a06d 396 Pfam PF13560 Helix-turn-helix domain 11 69 3.4E-12 T 31-10-2018 DY252_21385 61f98ce005a642bb1214b16b0912a06d 396 Gene3D G3DSA:1.10.260.40 5 79 5.7E-15 T 31-10-2018 DY252_21385 61f98ce005a642bb1214b16b0912a06d 396 SUPERFAMILY SSF47413 9 74 4.02E-14 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_21385 61f98ce005a642bb1214b16b0912a06d 396 SMART SM00530 15 70 5.5E-12 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_10110 d30c5422690f4e644af12dcb47d176ec 495 SUPERFAMILY SSF52402 40 234 1.12E-44 T 31-10-2018 DY252_10110 d30c5422690f4e644af12dcb47d176ec 495 Gene3D G3DSA:3.40.50.620 44 252 6.4E-57 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_10110 d30c5422690f4e644af12dcb47d176ec 495 Pfam PF01171 PP-loop family 52 230 4.2E-52 T 31-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 DY252_10110 d30c5422690f4e644af12dcb47d176ec 495 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 36 334 18.517 T 31-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DY252_10110 d30c5422690f4e644af12dcb47d176ec 495 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 52 231 1.0E-46 T 31-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DY252_21400 fde63e4b917a3e40fd74bd4c6b7f9563 446 Pfam PF13657 HipA N-terminal domain 10 110 1.3E-25 T 31-10-2018 IPR017508 HipA, N-terminal subdomain 1 DY252_21400 fde63e4b917a3e40fd74bd4c6b7f9563 446 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 10 111 5.5E-29 T 31-10-2018 IPR017508 HipA, N-terminal subdomain 1 DY252_21400 fde63e4b917a3e40fd74bd4c6b7f9563 446 Pfam PF07804 HipA-like C-terminal domain 157 401 8.5E-54 T 31-10-2018 IPR012893 HipA-like, C-terminal DY252_12170 975b34979bf2cdff64b11e32cfe1f016 424 SUPERFAMILY SSF55681 116 417 7.92E-96 T 31-10-2018 DY252_12170 975b34979bf2cdff64b11e32cfe1f016 424 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 415 9.5E-161 T 31-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DY252_12170 975b34979bf2cdff64b11e32cfe1f016 424 Gene3D G3DSA:3.30.930.10 105 423 1.4E-119 T 31-10-2018 DY252_12170 975b34979bf2cdff64b11e32cfe1f016 424 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 420 40.06 T 31-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DY252_12170 975b34979bf2cdff64b11e32cfe1f016 424 Gene3D G3DSA:1.10.287.40 1 104 3.3E-22 T 31-10-2018 DY252_12170 975b34979bf2cdff64b11e32cfe1f016 424 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 106 1.0E-26 T 31-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 DY252_12170 975b34979bf2cdff64b11e32cfe1f016 424 PRINTS PR00981 Seryl-tRNA synthetase signature 314 327 3.2E-32 T 31-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DY252_12170 975b34979bf2cdff64b11e32cfe1f016 424 PRINTS PR00981 Seryl-tRNA synthetase signature 331 347 3.2E-32 T 31-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DY252_12170 975b34979bf2cdff64b11e32cfe1f016 424 PRINTS PR00981 Seryl-tRNA synthetase signature 349 365 3.2E-32 T 31-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DY252_12170 975b34979bf2cdff64b11e32cfe1f016 424 PRINTS PR00981 Seryl-tRNA synthetase signature 262 274 3.2E-32 T 31-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DY252_12170 975b34979bf2cdff64b11e32cfe1f016 424 PRINTS PR00981 Seryl-tRNA synthetase signature 274 287 3.2E-32 T 31-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DY252_12170 975b34979bf2cdff64b11e32cfe1f016 424 PIRSF PIRSF001529 1 423 9.8E-171 T 31-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DY252_12170 975b34979bf2cdff64b11e32cfe1f016 424 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 398 2.0E-34 T 31-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_12170 975b34979bf2cdff64b11e32cfe1f016 424 SUPERFAMILY SSF46589 1 112 2.35E-26 T 31-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DY252_15100 374dcedf2ac230f26621d6f39461a7c0 667 Gene3D G3DSA:2.40.50.100 599 665 5.1E-21 T 31-10-2018 DY252_15100 374dcedf2ac230f26621d6f39461a7c0 667 Gene3D G3DSA:3.30.1490.20 131 202 2.4E-160 T 31-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DY252_15100 374dcedf2ac230f26621d6f39461a7c0 667 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 31-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DY252_15100 374dcedf2ac230f26621d6f39461a7c0 667 Gene3D G3DSA:3.30.470.20 87 441 2.4E-160 T 31-10-2018 DY252_15100 374dcedf2ac230f26621d6f39461a7c0 667 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 620 637 - T 31-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DY252_15100 374dcedf2ac230f26621d6f39461a7c0 667 Pfam PF00364 Biotin-requiring enzyme 598 663 3.4E-17 T 31-10-2018 IPR000089 Biotin/lipoyl attachment DY252_15100 374dcedf2ac230f26621d6f39461a7c0 667 Gene3D G3DSA:3.40.50.20 3 85 4.9E-34 T 31-10-2018 DY252_15100 374dcedf2ac230f26621d6f39461a7c0 667 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 31-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DY252_15100 374dcedf2ac230f26621d6f39461a7c0 667 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 8.0E-38 T 31-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DY252_15100 374dcedf2ac230f26621d6f39461a7c0 667 SUPERFAMILY SSF51230 591 664 4.32E-20 T 31-10-2018 IPR011053 Single hybrid motif DY252_15100 374dcedf2ac230f26621d6f39461a7c0 667 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 110 4.1E-42 T 31-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DY252_15100 374dcedf2ac230f26621d6f39461a7c0 667 SUPERFAMILY SSF51246 331 447 1.78E-40 T 31-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DY252_15100 374dcedf2ac230f26621d6f39461a7c0 667 Gene3D G3DSA:3.30.700.40 442 583 1.7E-8 T 31-10-2018 DY252_15100 374dcedf2ac230f26621d6f39461a7c0 667 SMART SM00878 336 443 3.7E-54 T 31-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DY252_15100 374dcedf2ac230f26621d6f39461a7c0 667 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 2.1E-76 T 31-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DY252_15100 374dcedf2ac230f26621d6f39461a7c0 667 SUPERFAMILY SSF56059 83 348 1.7E-66 T 31-10-2018 DY252_15100 374dcedf2ac230f26621d6f39461a7c0 667 SUPERFAMILY SSF52440 2 113 2.52E-46 T 31-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DY252_14460 9d12d2ea4530d15076ddf95c183e82d0 287 Pfam PF04784 Protein of unknown function, DUF547 99 217 1.6E-24 T 31-10-2018 IPR006869 Domain of unknown function DUF547 DY252_21135 e48689c86b941d9b90dc9af1ba2fc306 314 Pfam PF00248 Aldo/keto reductase family 24 291 4.6E-47 T 31-10-2018 IPR023210 NADP-dependent oxidoreductase domain DY252_21135 e48689c86b941d9b90dc9af1ba2fc306 314 SUPERFAMILY SSF51430 24 294 1.57E-55 T 31-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DY252_21135 e48689c86b941d9b90dc9af1ba2fc306 314 Gene3D G3DSA:3.20.20.100 20 309 1.3E-64 T 31-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DY252_00155 77c30cd7789e576510bc0ef665b716ce 401 SUPERFAMILY SSF53756 15 396 2.04E-55 T 31-10-2018 DY252_00155 77c30cd7789e576510bc0ef665b716ce 401 Pfam PF12000 Gkycosyl transferase family 4 group 25 185 3.8E-48 T 31-10-2018 IPR022623 Domain of unknown function DUF3495 DY252_00155 77c30cd7789e576510bc0ef665b716ce 401 Gene3D G3DSA:3.40.50.2000 1 199 1.2E-11 T 31-10-2018 DY252_00155 77c30cd7789e576510bc0ef665b716ce 401 Pfam PF00534 Glycosyl transferases group 1 206 372 1.1E-23 T 31-10-2018 IPR001296 Glycosyl transferase, family 1 DY252_00155 77c30cd7789e576510bc0ef665b716ce 401 Gene3D G3DSA:3.40.50.2000 200 375 1.1E-33 T 31-10-2018 DY252_13855 c62045fff49918f47191880df4c0e9b1 283 Gene3D G3DSA:3.40.50.1820 29 275 7.3E-55 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_13855 c62045fff49918f47191880df4c0e9b1 283 SUPERFAMILY SSF53474 11 266 1.24E-45 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_13855 c62045fff49918f47191880df4c0e9b1 283 Pfam PF07859 alpha/beta hydrolase fold 72 191 1.7E-15 T 31-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DY252_08795 bea6285ada2d0f87c410d849a72f2608 522 Pfam PF04293 SpoVR like protein 17 460 1.5E-162 T 31-10-2018 IPR007390 Sporulation stage V, protein R DY252_11400 5ad52d1b4789f5b52d4b73a2507ea27a 431 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 431 212.038 T 31-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DY252_11400 5ad52d1b4789f5b52d4b73a2507ea27a 431 Gene3D G3DSA:3.40.440.10 6 258 1.1E-93 T 31-10-2018 DY252_11400 5ad52d1b4789f5b52d4b73a2507ea27a 431 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 1.9E-159 T 31-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DY252_11400 5ad52d1b4789f5b52d4b73a2507ea27a 431 Pfam PF00709 Adenylosuccinate synthetase 4 423 2.4E-173 T 31-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DY252_11400 5ad52d1b4789f5b52d4b73a2507ea27a 431 SUPERFAMILY SSF52540 1 425 2.02E-169 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_11400 5ad52d1b4789f5b52d4b73a2507ea27a 431 Gene3D G3DSA:1.10.300.10 102 201 1.1E-93 T 31-10-2018 DY252_11400 5ad52d1b4789f5b52d4b73a2507ea27a 431 Gene3D G3DSA:3.90.170.10 267 431 5.0E-67 T 31-10-2018 DY252_11400 5ad52d1b4789f5b52d4b73a2507ea27a 431 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 31-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DY252_11400 5ad52d1b4789f5b52d4b73a2507ea27a 431 SMART SM00788 3 424 5.0E-286 T 31-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DY252_19340 be6ef96ace797ce34db23e94c1bc59c0 456 Pfam PF02954 Bacterial regulatory protein, Fis family 414 453 5.7E-11 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_19340 be6ef96ace797ce34db23e94c1bc59c0 456 SUPERFAMILY SSF52172 3 186 5.83E-43 T 31-10-2018 IPR011006 CheY-like superfamily DY252_19340 be6ef96ace797ce34db23e94c1bc59c0 456 Gene3D G3DSA:1.10.8.60 315 388 6.8E-20 T 31-10-2018 DY252_19340 be6ef96ace797ce34db23e94c1bc59c0 456 Gene3D G3DSA:3.40.50.300 134 314 3.7E-61 T 31-10-2018 DY252_19340 be6ef96ace797ce34db23e94c1bc59c0 456 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 436 2.3E-10 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_19340 be6ef96ace797ce34db23e94c1bc59c0 456 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 436 456 2.3E-10 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_19340 be6ef96ace797ce34db23e94c1bc59c0 456 SUPERFAMILY SSF46689 356 455 1.61E-12 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_19340 be6ef96ace797ce34db23e94c1bc59c0 456 Pfam PF00072 Response regulator receiver domain 7 116 5.1E-30 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_19340 be6ef96ace797ce34db23e94c1bc59c0 456 Pfam PF00158 Sigma-54 interaction domain 142 309 1.0E-64 T 31-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DY252_19340 be6ef96ace797ce34db23e94c1bc59c0 456 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 31-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DY252_19340 be6ef96ace797ce34db23e94c1bc59c0 456 SUPERFAMILY SSF52540 142 385 4.91E-66 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_19340 be6ef96ace797ce34db23e94c1bc59c0 456 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 31-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DY252_19340 be6ef96ace797ce34db23e94c1bc59c0 456 SMART SM00448 5 116 5.2E-38 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_19340 be6ef96ace797ce34db23e94c1bc59c0 456 SMART SM00382 163 306 7.8E-9 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_19340 be6ef96ace797ce34db23e94c1bc59c0 456 Gene3D G3DSA:1.10.10.60 389 456 2.2E-13 T 31-10-2018 DY252_19340 be6ef96ace797ce34db23e94c1bc59c0 456 Gene3D G3DSA:3.40.50.2300 2 133 1.4E-38 T 31-10-2018 DY252_11740 6454f07a337e475c3ffb4102456e9f0e 559 Pfam PF02470 MlaD protein 295 395 4.8E-17 T 31-10-2018 IPR003399 Mce/MlaD DY252_11740 6454f07a337e475c3ffb4102456e9f0e 559 Pfam PF02470 MlaD protein 51 141 2.7E-13 T 31-10-2018 IPR003399 Mce/MlaD DY252_11740 6454f07a337e475c3ffb4102456e9f0e 559 Pfam PF02470 MlaD protein 166 226 1.9E-6 T 31-10-2018 IPR003399 Mce/MlaD DY252_08935 e2415afa3e387890670f00323aabd78f 1388 Gene3D G3DSA:3.90.1800.10 1296 1350 8.6E-11 T 31-10-2018 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 SUPERFAMILY SSF64484 12 1387 0.0 T 31-10-2018 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 Gene3D G3DSA:2.40.50.100 747 824 7.4E-29 T 31-10-2018 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 Gene3D G3DSA:2.40.50.150 865 986 2.1E-45 T 31-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 Gene3D G3DSA:2.40.270.10 1050 1286 2.1E-81 T 31-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 Pfam PF04560 RNA polymerase Rpb2, domain 7 1310 1384 4.9E-27 T 31-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1386 12.461 T 31-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 Pfam PF04565 RNA polymerase Rpb2, domain 3 546 614 5.9E-32 T 31-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 Gene3D G3DSA:3.90.1110.10 353 475 1.2E-33 T 31-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 Gene3D G3DSA:3.90.1100.10 476 664 3.4E-73 T 31-10-2018 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1106 1118 - T 31-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 Gene3D G3DSA:3.90.1110.10 164 259 2.9E-23 T 31-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 Pfam PF10385 RNA polymerase beta subunit external 1 domain 624 689 3.6E-21 T 31-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1383 0.0 T 31-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 Pfam PF00562 RNA polymerase Rpb2, domain 6 750 1308 1.0E-163 T 31-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 Pfam PF04563 RNA polymerase beta subunit 27 532 4.1E-36 T 31-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 Gene3D G3DSA:2.40.270.10 825 864 2.3E-6 T 31-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 Pfam PF04561 RNA polymerase Rpb2, domain 2 388 487 1.5E-20 T 31-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 Gene3D G3DSA:3.90.1100.10 18 163 9.7E-59 T 31-10-2018 DY252_08935 e2415afa3e387890670f00323aabd78f 1388 Gene3D G3DSA:3.90.1100.10 675 746 5.5E-20 T 31-10-2018 DY252_16355 42f84273bcd740ee24d1d8990b68c1e5 529 PIRSF PIRSF000538 5 528 7.7E-72 T 31-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DY252_16355 42f84273bcd740ee24d1d8990b68c1e5 529 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 278 475 7.9E-47 T 31-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DY252_16355 42f84273bcd740ee24d1d8990b68c1e5 529 SUPERFAMILY SSF53067 276 521 2.38E-51 T 31-10-2018 DY252_16355 42f84273bcd740ee24d1d8990b68c1e5 529 Gene3D G3DSA:3.30.420.460 320 510 8.7E-167 T 31-10-2018 DY252_16355 42f84273bcd740ee24d1d8990b68c1e5 529 Gene3D G3DSA:3.30.420.40 8 500 8.7E-167 T 31-10-2018 DY252_16355 42f84273bcd740ee24d1d8990b68c1e5 529 SUPERFAMILY SSF53067 8 264 1.84E-55 T 31-10-2018 DY252_16355 42f84273bcd740ee24d1d8990b68c1e5 529 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 8 263 6.2E-32 T 31-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DY252_16355 42f84273bcd740ee24d1d8990b68c1e5 529 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 8 521 3.2E-171 T 31-10-2018 IPR006003 FGGY carbohydrate kinase, pentulose kinase GO:0005975|GO:0016773 DY252_04560 6920cf675ea58e01e954b1ffe225eb11 957 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 794 916 1.1E-32 T 31-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein DY252_04560 6920cf675ea58e01e954b1ffe225eb11 957 Pfam PF13244 Domain of unknown function (DUF4040) 610 674 2.0E-17 T 31-10-2018 IPR025383 Domain of unknown function DUF4040 DY252_04560 6920cf675ea58e01e954b1ffe225eb11 957 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 60 113 1.4E-10 T 31-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_04560 6920cf675ea58e01e954b1ffe225eb11 957 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 1.0E-35 T 31-10-2018 DY252_04560 6920cf675ea58e01e954b1ffe225eb11 957 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 1.0E-35 T 31-10-2018 DY252_04560 6920cf675ea58e01e954b1ffe225eb11 957 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 1.0E-35 T 31-10-2018 DY252_04560 6920cf675ea58e01e954b1ffe225eb11 957 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 1.0E-35 T 31-10-2018 DY252_04560 6920cf675ea58e01e954b1ffe225eb11 957 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 414 433 1.0E-35 T 31-10-2018 DY252_04560 6920cf675ea58e01e954b1ffe225eb11 957 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 1.0E-35 T 31-10-2018 DY252_04560 6920cf675ea58e01e954b1ffe225eb11 957 Pfam PF00361 Proton-conducting membrane transporter 126 404 5.6E-63 T 31-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_00725 b6605df55eea7978d9b22ec848b13be2 241 Pfam PF00117 Glutamine amidotransferase class-I 80 194 1.3E-13 T 31-10-2018 IPR017926 Glutamine amidotransferase DY252_00725 b6605df55eea7978d9b22ec848b13be2 241 SUPERFAMILY SSF52317 47 205 2.01E-40 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_00725 b6605df55eea7978d9b22ec848b13be2 241 Gene3D G3DSA:3.40.50.880 16 236 3.0E-45 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_11815 557e608d6a89185ee95d9aa12900426c 527 SMART SM00382 294 493 3.2 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_11815 557e608d6a89185ee95d9aa12900426c 527 SMART SM00382 41 229 2.8E-12 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_11815 557e608d6a89185ee95d9aa12900426c 527 Pfam PF00005 ABC transporter 33 180 1.2E-27 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_11815 557e608d6a89185ee95d9aa12900426c 527 Pfam PF00005 ABC transporter 285 444 2.9E-19 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_11815 557e608d6a89185ee95d9aa12900426c 527 Gene3D G3DSA:3.40.50.300 265 526 7.9E-41 T 31-10-2018 DY252_11815 557e608d6a89185ee95d9aa12900426c 527 Gene3D G3DSA:3.40.50.300 3 253 3.7E-55 T 31-10-2018 DY252_11815 557e608d6a89185ee95d9aa12900426c 527 SUPERFAMILY SSF52540 15 238 1.77E-53 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_11815 557e608d6a89185ee95d9aa12900426c 527 SUPERFAMILY SSF52540 261 502 2.51E-43 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_11815 557e608d6a89185ee95d9aa12900426c 527 ProSitePatterns PS00211 ABC transporters family signature. 417 431 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_05900 aa24453a9e700a77dd3b4e87e609d1d0 231 Gene3D G3DSA:1.20.950.20 1 214 3.5E-80 T 31-10-2018 DY252_05900 aa24453a9e700a77dd3b4e87e609d1d0 231 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 3 224 1.6E-82 T 31-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 DY252_05900 aa24453a9e700a77dd3b4e87e609d1d0 231 SUPERFAMILY SSF103501 1 223 1.7E-66 T 31-10-2018 IPR036197 NarG-like superfamily DY252_05900 aa24453a9e700a77dd3b4e87e609d1d0 231 Pfam PF02665 Nitrate reductase gamma subunit 3 223 1.1E-83 T 31-10-2018 IPR023234 NarG-like domain DY252_01825 e081cff92fb4ee810b67bad82aba75ba 213 SUPERFAMILY SSF51064 137 194 1.7E-18 T 31-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 DY252_01825 e081cff92fb4ee810b67bad82aba75ba 213 Gene3D G3DSA:3.90.20.20 10 135 5.1E-27 T 31-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 DY252_01825 e081cff92fb4ee810b67bad82aba75ba 213 SUPERFAMILY SSF58014 40 136 2.62E-26 T 31-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 DY252_01825 e081cff92fb4ee810b67bad82aba75ba 213 Hamap MF_01151 Protein GrpE [grpE]. 10 192 20.093 T 31-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DY252_01825 e081cff92fb4ee810b67bad82aba75ba 213 Gene3D G3DSA:2.30.22.10 136 192 1.0E-21 T 31-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 DY252_01825 e081cff92fb4ee810b67bad82aba75ba 213 ProSitePatterns PS01071 grpE protein signature. 147 190 - T 31-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DY252_01825 e081cff92fb4ee810b67bad82aba75ba 213 Pfam PF01025 GrpE 28 192 1.3E-52 T 31-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DY252_01825 e081cff92fb4ee810b67bad82aba75ba 213 PRINTS PR00773 GrpE protein signature 86 101 1.1E-25 T 31-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DY252_01825 e081cff92fb4ee810b67bad82aba75ba 213 PRINTS PR00773 GrpE protein signature 144 159 1.1E-25 T 31-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DY252_01825 e081cff92fb4ee810b67bad82aba75ba 213 PRINTS PR00773 GrpE protein signature 171 190 1.1E-25 T 31-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DY252_01825 e081cff92fb4ee810b67bad82aba75ba 213 PRINTS PR00773 GrpE protein signature 58 74 1.1E-25 T 31-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DY252_05905 3af7b277ae6ae0f436ab8fec98fda0a5 234 Gene3D G3DSA:1.20.120.700 5 164 1.0E-18 T 31-10-2018 DY252_05905 3af7b277ae6ae0f436ab8fec98fda0a5 234 Gene3D G3DSA:1.10.4070.10 70 151 1.0E-18 T 31-10-2018 DY252_05905 3af7b277ae6ae0f436ab8fec98fda0a5 234 Pfam PF02613 Nitrate reductase delta subunit 36 159 1.1E-13 T 31-10-2018 IPR020945 DMSO/Nitrate reductase chaperone DY252_05905 3af7b277ae6ae0f436ab8fec98fda0a5 234 SUPERFAMILY SSF89155 4 165 1.96E-32 T 31-10-2018 IPR036411 TorD-like superfamily DY252_05905 3af7b277ae6ae0f436ab8fec98fda0a5 234 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 9 162 8.7E-34 T 31-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 615 1.4E-19 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 594 1.4E-19 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 580 1.4E-19 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 634 1.4E-19 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 SMART SM00304 197 249 4.3E-7 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 SMART SM00387 507 637 1.2E-28 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 SUPERFAMILY SSF52172 655 779 1.99E-23 T 31-10-2018 IPR011006 CheY-like superfamily DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 Pfam PF00512 His Kinase A (phospho-acceptor) domain 401 463 2.5E-9 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 Gene3D G3DSA:1.20.1480.50 159 251 1.2E-6 T 31-10-2018 DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 Gene3D G3DSA:1.10.287.130 389 465 1.9E-18 T 31-10-2018 DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 SMART SM00388 400 466 1.6E-7 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 259 384 1.6E-8 T 31-10-2018 IPR000014 PAS domain DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 Pfam PF00072 Response regulator receiver domain 659 772 9.9E-15 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 SMART SM00448 657 772 8.7E-14 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 Gene3D G3DSA:3.40.50.2300 655 784 4.8E-22 T 31-10-2018 DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 Gene3D G3DSA:3.30.565.10 467 643 9.8E-43 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 508 635 1.3E-19 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 Gene3D G3DSA:3.30.450.20 252 388 6.8E-13 T 31-10-2018 DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 SUPERFAMILY SSF158472 199 246 1.44E-5 T 31-10-2018 DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 SUPERFAMILY SSF55874 455 636 1.44E-38 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 SUPERFAMILY SSF47384 393 463 6.87E-11 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_03870 f2e1c27822dbcddd7ba54224cda80311 786 SUPERFAMILY SSF55785 250 376 5.52E-12 T 31-10-2018 IPR035965 PAS domain superfamily DY252_12335 f97dc022af57859325a495b07e288022 1165 SUPERFAMILY SSF143517 1014 1161 1.44E-40 T 31-10-2018 IPR037235 TRCF-like, C-terminal domain DY252_12335 f97dc022af57859325a495b07e288022 1165 SMART SM00487 615 805 5.3E-32 T 31-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DY252_12335 f97dc022af57859325a495b07e288022 1165 Gene3D G3DSA:3.40.50.300 494 1004 3.0E-222 T 31-10-2018 DY252_12335 f97dc022af57859325a495b07e288022 1165 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 34 1156 27.477 T 31-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 DY252_12335 f97dc022af57859325a495b07e288022 1165 Pfam PF02559 CarD-like/TRCF domain 497 588 8.5E-24 T 31-10-2018 IPR003711 CarD-like/TRCF domain DY252_12335 f97dc022af57859325a495b07e288022 1165 SUPERFAMILY SSF52540 540 799 3.8E-56 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12335 f97dc022af57859325a495b07e288022 1165 SUPERFAMILY SSF52540 4 354 7.73E-91 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12335 f97dc022af57859325a495b07e288022 1165 Pfam PF00270 DEAD/DEAH box helicase 620 779 3.2E-17 T 31-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DY252_12335 f97dc022af57859325a495b07e288022 1165 Pfam PF00271 Helicase conserved C-terminal domain 819 924 2.7E-18 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_12335 f97dc022af57859325a495b07e288022 1165 SUPERFAMILY SSF52540 364 486 1.12E-15 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12335 f97dc022af57859325a495b07e288022 1165 Gene3D G3DSA:3.40.50.11180 38 335 1.8E-88 T 31-10-2018 DY252_12335 f97dc022af57859325a495b07e288022 1165 Gene3D G3DSA:3.30.2060.10 134 220 1.8E-88 T 31-10-2018 DY252_12335 f97dc022af57859325a495b07e288022 1165 SMART SM00982 1021 1121 2.6E-43 T 31-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 DY252_12335 f97dc022af57859325a495b07e288022 1165 SUPERFAMILY SSF52540 797 1005 5.11E-47 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12335 f97dc022af57859325a495b07e288022 1165 SMART SM00490 841 925 3.0E-19 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_12335 f97dc022af57859325a495b07e288022 1165 Gene3D G3DSA:3.40.50.300 557 796 3.0E-222 T 31-10-2018 DY252_12335 f97dc022af57859325a495b07e288022 1165 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 153 1094 0.0 T 31-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 DY252_12335 f97dc022af57859325a495b07e288022 1165 SMART SM01058 495 591 1.6E-44 T 31-10-2018 IPR003711 CarD-like/TRCF domain DY252_12335 f97dc022af57859325a495b07e288022 1165 Gene3D G3DSA:2.30.30.840 499 556 3.0E-222 T 31-10-2018 DY252_12335 f97dc022af57859325a495b07e288022 1165 Gene3D G3DSA:3.90.1150.50 1018 1164 2.1E-36 T 31-10-2018 IPR037235 TRCF-like, C-terminal domain DY252_12335 f97dc022af57859325a495b07e288022 1165 Pfam PF03461 TRCF domain 1023 1113 1.8E-25 T 31-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 DY252_12335 f97dc022af57859325a495b07e288022 1165 SUPERFAMILY SSF141259 487 561 4.32E-20 T 31-10-2018 IPR036101 CarD-like/TRCF domain superfamily DY252_02895 30bf88e65b4c9c6c6629d1d7cb82fd2a 466 Gene3D G3DSA:3.40.630.10 140 464 7.0E-121 T 31-10-2018 DY252_02895 30bf88e65b4c9c6c6629d1d7cb82fd2a 466 SUPERFAMILY SSF52949 32 146 3.83E-6 T 31-10-2018 DY252_02895 30bf88e65b4c9c6c6629d1d7cb82fd2a 466 PRINTS PR00481 Cytosol aminopeptidase signature 228 245 3.2E-44 T 31-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DY252_02895 30bf88e65b4c9c6c6629d1d7cb82fd2a 466 PRINTS PR00481 Cytosol aminopeptidase signature 309 329 3.2E-44 T 31-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DY252_02895 30bf88e65b4c9c6c6629d1d7cb82fd2a 466 PRINTS PR00481 Cytosol aminopeptidase signature 337 352 3.2E-44 T 31-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DY252_02895 30bf88e65b4c9c6c6629d1d7cb82fd2a 466 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 3.2E-44 T 31-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DY252_02895 30bf88e65b4c9c6c6629d1d7cb82fd2a 466 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 3.2E-44 T 31-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DY252_02895 30bf88e65b4c9c6c6629d1d7cb82fd2a 466 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 154 453 4.6E-104 T 31-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DY252_02895 30bf88e65b4c9c6c6629d1d7cb82fd2a 466 Gene3D G3DSA:3.40.220.10 4 136 1.9E-33 T 31-10-2018 DY252_02895 30bf88e65b4c9c6c6629d1d7cb82fd2a 466 SUPERFAMILY SSF53187 149 463 1.7E-105 T 31-10-2018 DY252_02895 30bf88e65b4c9c6c6629d1d7cb82fd2a 466 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 313 320 - T 31-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DY252_12760 a7769074a338f53a67dee77fdae12ea3 459 Pfam PF02954 Bacterial regulatory protein, Fis family 414 452 1.7E-10 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_12760 a7769074a338f53a67dee77fdae12ea3 459 SMART SM00448 3 116 1.9E-29 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_12760 a7769074a338f53a67dee77fdae12ea3 459 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 31-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DY252_12760 a7769074a338f53a67dee77fdae12ea3 459 SUPERFAMILY SSF52540 141 373 3.74E-64 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12760 a7769074a338f53a67dee77fdae12ea3 459 Gene3D G3DSA:1.10.10.60 403 457 6.7E-14 T 31-10-2018 DY252_12760 a7769074a338f53a67dee77fdae12ea3 459 Gene3D G3DSA:1.10.8.60 312 384 1.4E-24 T 31-10-2018 DY252_12760 a7769074a338f53a67dee77fdae12ea3 459 Gene3D G3DSA:3.40.50.2300 2 132 2.5E-35 T 31-10-2018 DY252_12760 a7769074a338f53a67dee77fdae12ea3 459 SUPERFAMILY SSF52172 4 186 3.7E-39 T 31-10-2018 IPR011006 CheY-like superfamily DY252_12760 a7769074a338f53a67dee77fdae12ea3 459 Gene3D G3DSA:3.40.50.300 133 310 3.3E-55 T 31-10-2018 DY252_12760 a7769074a338f53a67dee77fdae12ea3 459 SMART SM00382 162 302 1.0E-11 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_12760 a7769074a338f53a67dee77fdae12ea3 459 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 437 457 1.3E-5 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_12760 a7769074a338f53a67dee77fdae12ea3 459 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 437 1.3E-5 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_12760 a7769074a338f53a67dee77fdae12ea3 459 Pfam PF00158 Sigma-54 interaction domain 142 305 5.9E-54 T 31-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DY252_12760 a7769074a338f53a67dee77fdae12ea3 459 Pfam PF00072 Response regulator receiver domain 5 116 3.2E-27 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_12760 a7769074a338f53a67dee77fdae12ea3 459 SUPERFAMILY SSF46689 352 456 2.55E-12 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_12760 a7769074a338f53a67dee77fdae12ea3 459 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 31-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DY252_14180 37c270e810d2438349b1c1dfbc973b1a 249 SUPERFAMILY SSF48008 103 234 7.06E-24 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_14180 37c270e810d2438349b1c1dfbc973b1a 249 SUPERFAMILY SSF46785 7 81 5.3E-21 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_14180 37c270e810d2438349b1c1dfbc973b1a 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 77 2.3E-18 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_14180 37c270e810d2438349b1c1dfbc973b1a 249 SMART SM00895 105 227 5.6E-18 T 31-10-2018 IPR011711 GntR, C-terminal DY252_14180 37c270e810d2438349b1c1dfbc973b1a 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.3E-8 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_14180 37c270e810d2438349b1c1dfbc973b1a 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.3E-8 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_14180 37c270e810d2438349b1c1dfbc973b1a 249 SMART SM00345 18 77 1.9E-19 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_14180 37c270e810d2438349b1c1dfbc973b1a 249 Gene3D G3DSA:1.20.120.530 101 235 3.2E-23 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_14180 37c270e810d2438349b1c1dfbc973b1a 249 Gene3D G3DSA:1.10.10.10 7 84 6.7E-21 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_14180 37c270e810d2438349b1c1dfbc973b1a 249 Pfam PF07729 FCD domain 106 226 5.6E-22 T 31-10-2018 IPR011711 GntR, C-terminal DY252_08960 58527892c6e377cbc6f74ba744fc85ec 396 SUPERFAMILY SSF52540 6 221 2.84E-61 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_08960 58527892c6e377cbc6f74ba744fc85ec 396 Gene3D G3DSA:2.40.30.10 340 395 7.1E-29 T 31-10-2018 DY252_08960 58527892c6e377cbc6f74ba744fc85ec 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 31-10-2018 IPR031157 Tr-type G domain, conserved site DY252_08960 58527892c6e377cbc6f74ba744fc85ec 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.803 T 31-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DY252_08960 58527892c6e377cbc6f74ba744fc85ec 396 SUPERFAMILY SSF50465 304 396 5.47E-35 T 31-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DY252_08960 58527892c6e377cbc6f74ba744fc85ec 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.2E-58 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_08960 58527892c6e377cbc6f74ba744fc85ec 396 Gene3D G3DSA:3.40.50.300 1 205 6.1E-72 T 31-10-2018 DY252_08960 58527892c6e377cbc6f74ba744fc85ec 396 SUPERFAMILY SSF50447 205 303 9.82E-31 T 31-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DY252_08960 58527892c6e377cbc6f74ba744fc85ec 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 4.3E-227 T 31-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DY252_08960 58527892c6e377cbc6f74ba744fc85ec 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 9.3E-24 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_08960 58527892c6e377cbc6f74ba744fc85ec 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 9.3E-24 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_08960 58527892c6e377cbc6f74ba744fc85ec 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 9.3E-24 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_08960 58527892c6e377cbc6f74ba744fc85ec 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 9.3E-24 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_08960 58527892c6e377cbc6f74ba744fc85ec 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.3E-24 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_08960 58527892c6e377cbc6f74ba744fc85ec 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 3.1E-14 T 31-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DY252_08960 58527892c6e377cbc6f74ba744fc85ec 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 9.3E-17 T 31-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DY252_08960 58527892c6e377cbc6f74ba744fc85ec 396 Gene3D G3DSA:2.40.30.10 209 336 2.7E-51 T 31-10-2018 DY252_08960 58527892c6e377cbc6f74ba744fc85ec 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 7.7E-32 T 31-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DY252_21710 cdc2667bd624179fd2560ea3fefcabfb 202 Gene3D G3DSA:3.40.30.10 1 81 1.2E-23 T 31-10-2018 DY252_21710 cdc2667bd624179fd2560ea3fefcabfb 202 SUPERFAMILY SSF52833 1 88 1.29E-22 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_21710 cdc2667bd624179fd2560ea3fefcabfb 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 129 193 7.1E-11 T 31-10-2018 IPR004046 Glutathione S-transferase, C-terminal DY252_21710 cdc2667bd624179fd2560ea3fefcabfb 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 76 1.3E-13 T 31-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DY252_21710 cdc2667bd624179fd2560ea3fefcabfb 202 SUPERFAMILY SSF47616 73 197 2.65E-29 T 31-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DY252_21710 cdc2667bd624179fd2560ea3fefcabfb 202 Gene3D G3DSA:1.20.1050.10 82 197 2.7E-37 T 31-10-2018 DY252_12950 4151975654e3b49792de41cdcaeff59a 379 Gene3D G3DSA:1.20.140.10 232 379 1.3E-53 T 31-10-2018 DY252_12950 4151975654e3b49792de41cdcaeff59a 379 SUPERFAMILY SSF47203 225 378 6.12E-58 T 31-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DY252_12950 4151975654e3b49792de41cdcaeff59a 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 1.7E-33 T 31-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DY252_12950 4151975654e3b49792de41cdcaeff59a 379 PIRSF PIRSF016578 222 378 7.6E-12 T 31-10-2018 DY252_12950 4151975654e3b49792de41cdcaeff59a 379 PIRSF PIRSF016578 2 192 5.2E-14 T 31-10-2018 DY252_12950 4151975654e3b49792de41cdcaeff59a 379 SUPERFAMILY SSF56645 2 240 2.49E-85 T 31-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DY252_12950 4151975654e3b49792de41cdcaeff59a 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 31-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DY252_12950 4151975654e3b49792de41cdcaeff59a 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 3.7E-28 T 31-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DY252_12950 4151975654e3b49792de41cdcaeff59a 379 Gene3D G3DSA:1.10.540.10 1 119 7.7E-41 T 31-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DY252_12950 4151975654e3b49792de41cdcaeff59a 379 Gene3D G3DSA:2.40.110.10 120 231 2.4E-44 T 31-10-2018 DY252_12950 4151975654e3b49792de41cdcaeff59a 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 31-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DY252_12950 4151975654e3b49792de41cdcaeff59a 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 376 2.2E-48 T 31-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DY252_06425 54aa49a64c6bd6b2469c00ab48a16d8b 274 SUPERFAMILY SSF48452 38 226 7.12E-13 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_06425 54aa49a64c6bd6b2469c00ab48a16d8b 274 Gene3D G3DSA:1.25.40.10 35 247 3.9E-58 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_06425 54aa49a64c6bd6b2469c00ab48a16d8b 274 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 6 236 36.772 T 31-10-2018 IPR017689 Outer membrane protein assembly factor BamD DY252_06425 54aa49a64c6bd6b2469c00ab48a16d8b 274 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 9 242 4.9E-88 T 31-10-2018 IPR017689 Outer membrane protein assembly factor BamD DY252_06425 54aa49a64c6bd6b2469c00ab48a16d8b 274 Pfam PF13525 Outer membrane lipoprotein 34 228 8.5E-54 T 31-10-2018 IPR039565 Outer membrane lipoprotein BamD-like DY252_18695 2691016233d1985eb6795f71cbd4d43c 339 PIRSF PIRSF006470 1 334 4.8E-66 T 31-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DY252_18695 2691016233d1985eb6795f71cbd4d43c 339 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 31 288 4.9E-53 T 31-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DY252_18695 2691016233d1985eb6795f71cbd4d43c 339 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 313 1.3E-70 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_18695 2691016233d1985eb6795f71cbd4d43c 339 Gene3D G3DSA:3.40.190.170 28 336 3.8E-91 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_20155 47a5251a13b41939c8c0bd8143070908 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 2.8E-7 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_20155 47a5251a13b41939c8c0bd8143070908 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 2.8E-7 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_20155 47a5251a13b41939c8c0bd8143070908 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 2.8E-7 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_20155 47a5251a13b41939c8c0bd8143070908 114 Pfam PF12840 Helix-turn-helix domain 10 69 1.0E-12 T 31-10-2018 DY252_20155 47a5251a13b41939c8c0bd8143070908 114 Gene3D G3DSA:1.10.10.10 1 93 7.2E-20 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_20155 47a5251a13b41939c8c0bd8143070908 114 SUPERFAMILY SSF46785 3 94 2.02E-21 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_20155 47a5251a13b41939c8c0bd8143070908 114 SMART SM00418 9 89 6.3E-10 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_03340 f487fd879b1952a0a5aa33ee92d016ff 544 Pfam PF00989 PAS fold 79 125 2.0E-5 T 31-10-2018 IPR013767 PAS fold GO:0006355 DY252_03340 f487fd879b1952a0a5aa33ee92d016ff 544 SUPERFAMILY SSF46689 495 543 1.43E-7 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_03340 f487fd879b1952a0a5aa33ee92d016ff 544 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 421 430 - T 31-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DY252_03340 f487fd879b1952a0a5aa33ee92d016ff 544 SUPERFAMILY SSF55785 78 159 2.27E-8 T 31-10-2018 IPR035965 PAS domain superfamily DY252_03340 f487fd879b1952a0a5aa33ee92d016ff 544 SMART SM00382 227 372 1.1E-8 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_03340 f487fd879b1952a0a5aa33ee92d016ff 544 Gene3D G3DSA:1.10.10.60 486 544 8.3E-21 T 31-10-2018 DY252_03340 f487fd879b1952a0a5aa33ee92d016ff 544 Pfam PF00158 Sigma-54 interaction domain 207 374 6.6E-66 T 31-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DY252_03340 f487fd879b1952a0a5aa33ee92d016ff 544 Gene3D G3DSA:3.30.70.260 1 79 7.6E-21 T 31-10-2018 DY252_03340 f487fd879b1952a0a5aa33ee92d016ff 544 Gene3D G3DSA:3.30.450.20 81 191 4.0E-16 T 31-10-2018 DY252_03340 f487fd879b1952a0a5aa33ee92d016ff 544 SUPERFAMILY SSF52540 206 451 1.82E-68 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_03340 f487fd879b1952a0a5aa33ee92d016ff 544 SMART SM00091 79 145 6.9E-7 T 31-10-2018 IPR000014 PAS domain DY252_03340 f487fd879b1952a0a5aa33ee92d016ff 544 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 501 543 1.9E-22 T 31-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 DY252_03340 f487fd879b1952a0a5aa33ee92d016ff 544 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 294 309 - T 31-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DY252_03340 f487fd879b1952a0a5aa33ee92d016ff 544 Gene3D G3DSA:1.10.8.60 379 458 3.0E-20 T 31-10-2018 DY252_03340 f487fd879b1952a0a5aa33ee92d016ff 544 Gene3D G3DSA:3.40.50.300 195 378 7.6E-67 T 31-10-2018 DY252_03340 f487fd879b1952a0a5aa33ee92d016ff 544 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 231 244 - T 31-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DY252_06330 571af2602802684810af65f57fad64bc 414 Gene3D G3DSA:1.20.1720.10 21 402 1.6E-88 T 31-10-2018 DY252_06330 571af2602802684810af65f57fad64bc 414 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 21 399 2.4E-60 T 31-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 DY252_06330 571af2602802684810af65f57fad64bc 414 Pfam PF07690 Major Facilitator Superfamily 26 371 4.2E-39 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_06330 571af2602802684810af65f57fad64bc 414 SUPERFAMILY SSF103473 18 400 6.8E-52 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_06245 6a22794bbd06298fe6529629daf78906 312 SUPERFAMILY SSF52283 4 136 1.87E-28 T 31-10-2018 DY252_06245 6a22794bbd06298fe6529629daf78906 312 Gene3D G3DSA:3.40.50.720 17 304 2.6E-108 T 31-10-2018 DY252_06245 6a22794bbd06298fe6529629daf78906 312 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 280 1.0E-47 T 31-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DY252_06245 6a22794bbd06298fe6529629daf78906 312 Gene3D G3DSA:3.40.50.720 100 283 2.6E-108 T 31-10-2018 DY252_06245 6a22794bbd06298fe6529629daf78906 312 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 10 304 3.5E-19 T 31-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DY252_06245 6a22794bbd06298fe6529629daf78906 312 SUPERFAMILY SSF51735 100 281 5.0E-51 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_13760 26c495f21dd255cf81ff81b97acde4f2 319 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 28 315 7.1E-141 T 31-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 DY252_13760 26c495f21dd255cf81ff81b97acde4f2 319 Gene3D G3DSA:3.40.190.10 37 298 4.5E-94 T 31-10-2018 DY252_13760 26c495f21dd255cf81ff81b97acde4f2 319 Gene3D G3DSA:3.40.190.100 118 227 4.5E-94 T 31-10-2018 DY252_13760 26c495f21dd255cf81ff81b97acde4f2 319 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 35 289 3.2E-56 T 31-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 DY252_13760 26c495f21dd255cf81ff81b97acde4f2 319 SUPERFAMILY SSF53850 27 305 2.12E-87 T 31-10-2018 DY252_01810 16ab657797a42c424fd20d1b0a663ca2 109 Pfam PF07978 NIPSNAP 5 100 1.6E-24 T 31-10-2018 IPR012577 NIPSNAP DY252_01810 16ab657797a42c424fd20d1b0a663ca2 109 Gene3D G3DSA:3.30.70.100 1 108 1.1E-6 T 31-10-2018 DY252_01810 16ab657797a42c424fd20d1b0a663ca2 109 SUPERFAMILY SSF54909 1 100 2.32E-21 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_17185 3d2d68c9be41aff7db479f97ddcf757d 291 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 279 5.6E-44 T 31-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DY252_17185 3d2d68c9be41aff7db479f97ddcf757d 291 SUPERFAMILY SSF54506 3 280 3.14E-49 T 31-10-2018 DY252_17185 3d2d68c9be41aff7db479f97ddcf757d 291 Gene3D G3DSA:3.10.310.10 7 278 1.6E-63 T 31-10-2018 DY252_17185 3d2d68c9be41aff7db479f97ddcf757d 291 Pfam PF02567 Phenazine biosynthesis-like protein 9 277 1.5E-41 T 31-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DY252_17185 3d2d68c9be41aff7db479f97ddcf757d 291 Gene3D G3DSA:3.10.310.10 120 277 1.6E-63 T 31-10-2018 DY252_17185 3d2d68c9be41aff7db479f97ddcf757d 291 PIRSF PIRSF016184 1 285 6.1E-52 T 31-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DY252_00650 060521ab8669c7a4dadfea88dbc2aca7 214 SUPERFAMILY SSF52540 1 206 1.03E-40 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_00650 060521ab8669c7a4dadfea88dbc2aca7 214 Pfam PF02224 Cytidylate kinase 3 207 4.5E-59 T 31-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DY252_00650 060521ab8669c7a4dadfea88dbc2aca7 214 TIGRFAM TIGR00017 cmk: cytidylate kinase 1 204 1.9E-56 T 31-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DY252_00650 060521ab8669c7a4dadfea88dbc2aca7 214 Gene3D G3DSA:3.40.50.300 1 213 8.9E-70 T 31-10-2018 DY252_00650 060521ab8669c7a4dadfea88dbc2aca7 214 Hamap MF_00238 Cytidylate kinase [cmk]. 1 210 31.355 T 31-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DY252_18380 08e3cd31a6ce26c3a3c6c5a8300ef3af 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 6.0E-11 T 31-10-2018 IPR002177 DNA-binding protein Dps DY252_18380 08e3cd31a6ce26c3a3c6c5a8300ef3af 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 73 89 6.0E-11 T 31-10-2018 IPR002177 DNA-binding protein Dps DY252_18380 08e3cd31a6ce26c3a3c6c5a8300ef3af 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 49 65 6.0E-11 T 31-10-2018 IPR002177 DNA-binding protein Dps DY252_18380 08e3cd31a6ce26c3a3c6c5a8300ef3af 167 Pfam PF00210 Ferritin-like domain 29 166 1.1E-24 T 31-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DY252_18380 08e3cd31a6ce26c3a3c6c5a8300ef3af 167 ProSitePatterns PS00819 Dps protein family signature 2. 75 89 - T 31-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DY252_18380 08e3cd31a6ce26c3a3c6c5a8300ef3af 167 SUPERFAMILY SSF47240 17 166 1.23E-41 T 31-10-2018 IPR009078 Ferritin-like superfamily DY252_18380 08e3cd31a6ce26c3a3c6c5a8300ef3af 167 ProSitePatterns PS00818 Dps protein family signature 1. 49 65 - T 31-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DY252_18380 08e3cd31a6ce26c3a3c6c5a8300ef3af 167 Gene3D G3DSA:1.20.1260.10 2 167 7.9E-54 T 31-10-2018 IPR012347 Ferritin-like DY252_18380 08e3cd31a6ce26c3a3c6c5a8300ef3af 167 PIRSF PIRSF005900 6 167 2.1E-44 T 31-10-2018 IPR002177 DNA-binding protein Dps DY252_12995 1e7b2c0547f4fcc1c691fbe4118d8335 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 260 267 - T 31-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DY252_12995 1e7b2c0547f4fcc1c691fbe4118d8335 495 Gene3D G3DSA:3.40.605.10 22 485 5.5E-166 T 31-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_12995 1e7b2c0547f4fcc1c691fbe4118d8335 495 SUPERFAMILY SSF53720 18 493 1.09E-154 T 31-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DY252_12995 1e7b2c0547f4fcc1c691fbe4118d8335 495 Gene3D G3DSA:3.40.309.10 265 459 5.5E-166 T 31-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DY252_12995 1e7b2c0547f4fcc1c691fbe4118d8335 495 Pfam PF00171 Aldehyde dehydrogenase family 30 490 9.9E-162 T 31-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DY252_12995 1e7b2c0547f4fcc1c691fbe4118d8335 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 289 300 - T 31-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DY252_09995 41278f9f877797396dbe31115ace77b6 188 Gene3D G3DSA:2.40.50.140 129 187 1.0E-19 T 31-10-2018 DY252_09995 41278f9f877797396dbe31115ace77b6 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 3.3E-20 T 31-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DY252_09995 41278f9f877797396dbe31115ace77b6 188 Gene3D G3DSA:2.40.50.140 65 128 8.1E-23 T 31-10-2018 DY252_09995 41278f9f877797396dbe31115ace77b6 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 1.4E-21 T 31-10-2018 IPR013185 Translation elongation factor, KOW-like DY252_09995 41278f9f877797396dbe31115ace77b6 188 SUPERFAMILY SSF50104 3 64 2.65E-17 T 31-10-2018 IPR008991 Translation protein SH3-like domain superfamily DY252_09995 41278f9f877797396dbe31115ace77b6 188 SUPERFAMILY SSF50249 129 186 2.57E-15 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_09995 41278f9f877797396dbe31115ace77b6 188 SUPERFAMILY SSF50249 66 127 2.74E-18 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_09995 41278f9f877797396dbe31115ace77b6 188 SMART SM00841 130 185 2.4E-26 T 31-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DY252_09995 41278f9f877797396dbe31115ace77b6 188 Hamap MF_00141 Elongation factor P [efp]. 2 186 45.047 T 31-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DY252_09995 41278f9f877797396dbe31115ace77b6 188 TIGRFAM TIGR00038 efp: translation elongation factor P 3 186 8.3E-71 T 31-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DY252_09995 41278f9f877797396dbe31115ace77b6 188 Gene3D G3DSA:2.30.30.30 1 63 2.6E-21 T 31-10-2018 IPR014722 Ribosomal protein L2, domain 2 DY252_09995 41278f9f877797396dbe31115ace77b6 188 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 31-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site DY252_09995 41278f9f877797396dbe31115ace77b6 188 SMART SM01185 68 122 2.7E-25 T 31-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DY252_09995 41278f9f877797396dbe31115ace77b6 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 4.9E-21 T 31-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DY252_09995 41278f9f877797396dbe31115ace77b6 188 PIRSF PIRSF005901 1 187 4.4E-69 T 31-10-2018 IPR020599 Translation elongation factor P/YeiP DY252_08370 95026b125384e558025859fca486879e 650 SUPERFAMILY SSF141868 403 638 1.44E-75 T 31-10-2018 IPR035919 EAL domain superfamily DY252_08370 95026b125384e558025859fca486879e 650 Pfam PF00563 EAL domain 404 635 6.5E-66 T 31-10-2018 IPR001633 EAL domain DY252_08370 95026b125384e558025859fca486879e 650 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 225 386 9.7E-34 T 31-10-2018 IPR000160 GGDEF domain DY252_08370 95026b125384e558025859fca486879e 650 Gene3D G3DSA:3.20.20.450 397 646 9.3E-80 T 31-10-2018 IPR035919 EAL domain superfamily DY252_08370 95026b125384e558025859fca486879e 650 Gene3D G3DSA:3.30.70.270 222 394 6.2E-48 T 31-10-2018 DY252_08370 95026b125384e558025859fca486879e 650 SMART SM00267 217 388 1.5E-52 T 31-10-2018 IPR000160 GGDEF domain DY252_08370 95026b125384e558025859fca486879e 650 SUPERFAMILY SSF55073 233 387 7.3E-43 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_08370 95026b125384e558025859fca486879e 650 SMART SM00052 398 640 1.4E-85 T 31-10-2018 IPR001633 EAL domain DY252_08370 95026b125384e558025859fca486879e 650 Pfam PF00990 Diguanylate cyclase, GGDEF domain 228 382 2.6E-40 T 31-10-2018 IPR000160 GGDEF domain DY252_10330 e2d64149a939a6ea8c26d2e7d489ed77 106 Pfam PF07876 Stress responsive A/B Barrel Domain 2 101 1.6E-23 T 31-10-2018 IPR013097 Stress responsive alpha-beta barrel DY252_10330 e2d64149a939a6ea8c26d2e7d489ed77 106 SMART SM00886 2 102 3.9E-29 T 31-10-2018 IPR013097 Stress responsive alpha-beta barrel DY252_10330 e2d64149a939a6ea8c26d2e7d489ed77 106 Gene3D G3DSA:3.30.70.100 1 102 4.9E-29 T 31-10-2018 DY252_10330 e2d64149a939a6ea8c26d2e7d489ed77 106 SUPERFAMILY SSF54909 1 104 1.07E-24 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_07255 ed892bb424281b712489ac018de4d4db 760 Gene3D G3DSA:1.10.274.10 205 332 1.1E-55 T 31-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 DY252_07255 ed892bb424281b712489ac018de4d4db 760 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 438 724 1.1E-83 T 31-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 DY252_07255 ed892bb424281b712489ac018de4d4db 760 Gene3D G3DSA:3.50.30.10 191 419 1.1E-55 T 31-10-2018 DY252_07255 ed892bb424281b712489ac018de4d4db 760 Pfam PF00391 PEP-utilising enzyme, mobile domain 338 409 3.1E-16 T 31-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DY252_07255 ed892bb424281b712489ac018de4d4db 760 SUPERFAMILY SSF52009 310 429 3.53E-26 T 31-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 DY252_07255 ed892bb424281b712489ac018de4d4db 760 SUPERFAMILY SSF47831 204 328 2.22E-27 T 31-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 DY252_07255 ed892bb424281b712489ac018de4d4db 760 Pfam PF13185 GAF domain 31 162 2.1E-14 T 31-10-2018 IPR003018 GAF domain GO:0005515 DY252_07255 ed892bb424281b712489ac018de4d4db 760 Pfam PF05524 PEP-utilising enzyme, N-terminal 189 311 1.1E-22 T 31-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 DY252_07255 ed892bb424281b712489ac018de4d4db 760 SUPERFAMILY SSF55781 13 161 2.62E-26 T 31-10-2018 DY252_07255 ed892bb424281b712489ac018de4d4db 760 Gene3D G3DSA:3.20.20.60 420 753 3.5E-89 T 31-10-2018 DY252_07255 ed892bb424281b712489ac018de4d4db 760 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 632 647 4.8E-18 T 31-10-2018 DY252_07255 ed892bb424281b712489ac018de4d4db 760 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 685 697 4.8E-18 T 31-10-2018 DY252_07255 ed892bb424281b712489ac018de4d4db 760 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 649 664 4.8E-18 T 31-10-2018 DY252_07255 ed892bb424281b712489ac018de4d4db 760 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 479 498 4.8E-18 T 31-10-2018 DY252_07255 ed892bb424281b712489ac018de4d4db 760 Gene3D G3DSA:3.30.450.40 12 170 1.3E-36 T 31-10-2018 IPR029016 GAF-like domain superfamily DY252_07255 ed892bb424281b712489ac018de4d4db 760 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 189 743 1.9E-125 T 31-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 DY252_07255 ed892bb424281b712489ac018de4d4db 760 SUPERFAMILY SSF51621 435 725 7.85E-89 T 31-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DY252_07255 ed892bb424281b712489ac018de4d4db 760 SMART SM00065 27 173 1.8E-16 T 31-10-2018 IPR003018 GAF domain GO:0005515 DY252_06890 86dffc7c76663bd02befe4c0ba5d9156 184 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 6 183 1.2E-47 T 31-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 DY252_06890 86dffc7c76663bd02befe4c0ba5d9156 184 SUPERFAMILY SSF51283 4 183 9.03E-50 T 31-10-2018 IPR036157 dUTPase-like superfamily DY252_06890 86dffc7c76663bd02befe4c0ba5d9156 184 Gene3D G3DSA:2.70.40.10 1 156 4.0E-50 T 31-10-2018 IPR036157 dUTPase-like superfamily DY252_06890 86dffc7c76663bd02befe4c0ba5d9156 184 Hamap MF_00146 dCTP deaminase [dcd]. 1 184 28.645 T 31-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 DY252_06890 86dffc7c76663bd02befe4c0ba5d9156 184 Pfam PF00692 dUTPase 75 179 4.7E-5 T 31-10-2018 IPR029054 dUTPase-like DY252_12715 ce39a602e96a8c3311afe0a8c9dda4c9 427 Gene3D G3DSA:3.90.1150.10 9 407 5.6E-107 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_12715 ce39a602e96a8c3311afe0a8c9dda4c9 427 SUPERFAMILY SSF53383 10 408 6.46E-106 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_12715 ce39a602e96a8c3311afe0a8c9dda4c9 427 Pfam PF00202 Aminotransferase class-III 17 409 6.6E-76 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_12715 ce39a602e96a8c3311afe0a8c9dda4c9 427 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 415 1.3E-147 T 31-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 DY252_12715 ce39a602e96a8c3311afe0a8c9dda4c9 427 Gene3D G3DSA:3.40.640.10 54 315 5.6E-107 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_12715 ce39a602e96a8c3311afe0a8c9dda4c9 427 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 3 411 1.1E-197 T 31-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 DY252_12715 ce39a602e96a8c3311afe0a8c9dda4c9 427 PIRSF PIRSF000521 1 128 1.7E-9 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_12715 ce39a602e96a8c3311afe0a8c9dda4c9 427 PIRSF PIRSF000521 123 413 5.5E-29 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_12715 ce39a602e96a8c3311afe0a8c9dda4c9 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 232 268 - T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_06865 2cd84b7bee4e8f4f32a8bd48eadaf10e 217 SUPERFAMILY SSF52172 1 128 3.98E-28 T 31-10-2018 IPR011006 CheY-like superfamily DY252_06865 2cd84b7bee4e8f4f32a8bd48eadaf10e 217 SUPERFAMILY SSF46894 148 215 8.5E-22 T 31-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DY252_06865 2cd84b7bee4e8f4f32a8bd48eadaf10e 217 SMART SM00448 1 115 2.3E-25 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_06865 2cd84b7bee4e8f4f32a8bd48eadaf10e 217 Gene3D G3DSA:3.40.50.12740 1 215 9.9E-57 T 31-10-2018 DY252_06865 2cd84b7bee4e8f4f32a8bd48eadaf10e 217 SMART SM00421 153 210 5.8E-22 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_06865 2cd84b7bee4e8f4f32a8bd48eadaf10e 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 2.0E-13 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_06865 2cd84b7bee4e8f4f32a8bd48eadaf10e 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 2.0E-13 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_06865 2cd84b7bee4e8f4f32a8bd48eadaf10e 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 2.0E-13 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_06865 2cd84b7bee4e8f4f32a8bd48eadaf10e 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 1.3E-20 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_06865 2cd84b7bee4e8f4f32a8bd48eadaf10e 217 Pfam PF00072 Response regulator receiver domain 3 115 9.3E-24 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_19330 cd2c7dc17b0aa84ed4478a90c6004831 345 Gene3D G3DSA:3.40.50.2300 142 327 2.9E-67 T 31-10-2018 DY252_19330 cd2c7dc17b0aa84ed4478a90c6004831 345 Gene3D G3DSA:3.40.50.2300 51 318 2.9E-67 T 31-10-2018 DY252_19330 cd2c7dc17b0aa84ed4478a90c6004831 345 SUPERFAMILY SSF53822 41 329 6.75E-53 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_19330 cd2c7dc17b0aa84ed4478a90c6004831 345 Pfam PF13407 Periplasmic binding protein domain 49 282 1.6E-45 T 31-10-2018 IPR025997 Periplasmic binding protein DY252_13375 b09c9cfebad6356a7759dc2090dbad28 259 Pfam PF00318 Ribosomal protein S2 11 224 1.4E-90 T 31-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_13375 b09c9cfebad6356a7759dc2090dbad28 259 Gene3D G3DSA:1.10.287.610 105 151 5.5E-85 T 31-10-2018 DY252_13375 b09c9cfebad6356a7759dc2090dbad28 259 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 31-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 DY252_13375 b09c9cfebad6356a7759dc2090dbad28 259 Gene3D G3DSA:3.40.50.10490 10 217 5.5E-85 T 31-10-2018 DY252_13375 b09c9cfebad6356a7759dc2090dbad28 259 PRINTS PR00395 Ribosomal protein S2 signature 89 106 1.2E-37 T 31-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_13375 b09c9cfebad6356a7759dc2090dbad28 259 PRINTS PR00395 Ribosomal protein S2 signature 159 176 1.2E-37 T 31-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_13375 b09c9cfebad6356a7759dc2090dbad28 259 PRINTS PR00395 Ribosomal protein S2 signature 39 48 1.2E-37 T 31-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_13375 b09c9cfebad6356a7759dc2090dbad28 259 PRINTS PR00395 Ribosomal protein S2 signature 197 211 1.2E-37 T 31-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_13375 b09c9cfebad6356a7759dc2090dbad28 259 PRINTS PR00395 Ribosomal protein S2 signature 8 26 1.2E-37 T 31-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_13375 b09c9cfebad6356a7759dc2090dbad28 259 PRINTS PR00395 Ribosomal protein S2 signature 176 187 1.2E-37 T 31-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_13375 b09c9cfebad6356a7759dc2090dbad28 259 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 6 227 8.6E-97 T 31-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_13375 b09c9cfebad6356a7759dc2090dbad28 259 SUPERFAMILY SSF52313 8 232 9.29E-90 T 31-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily DY252_13375 b09c9cfebad6356a7759dc2090dbad28 259 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 239 39.992 T 31-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_15705 b7a1e4397057380b9f674238347305fe 74 Pfam PF11747 Killing trait 9 71 1.1E-19 T 31-10-2018 IPR021070 Killing trait, RebB DY252_19170 cc06e98353ec35ee482b83bf2f46748c 254 SUPERFAMILY SSF51735 8 250 8.06E-57 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_19170 cc06e98353ec35ee482b83bf2f46748c 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.4E-22 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19170 cc06e98353ec35ee482b83bf2f46748c 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.4E-22 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19170 cc06e98353ec35ee482b83bf2f46748c 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.4E-22 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19170 cc06e98353ec35ee482b83bf2f46748c 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.4E-22 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19170 cc06e98353ec35ee482b83bf2f46748c 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.4E-22 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19170 cc06e98353ec35ee482b83bf2f46748c 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 2.0E-8 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19170 cc06e98353ec35ee482b83bf2f46748c 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 2.0E-8 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19170 cc06e98353ec35ee482b83bf2f46748c 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 2.0E-8 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19170 cc06e98353ec35ee482b83bf2f46748c 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_19170 cc06e98353ec35ee482b83bf2f46748c 254 Pfam PF00106 short chain dehydrogenase 8 203 1.1E-42 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19170 cc06e98353ec35ee482b83bf2f46748c 254 Gene3D G3DSA:3.40.50.720 1 253 1.1E-67 T 31-10-2018 DY252_21870 47047f1d744f5f77198c05566c757f62 310 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 23 304 37.634 T 31-10-2018 IPR005337 RapZ-like family GO:0005524 DY252_21870 47047f1d744f5f77198c05566c757f62 310 SUPERFAMILY SSF52540 24 175 1.38E-9 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_21870 47047f1d744f5f77198c05566c757f62 310 PIRSF PIRSF005052 23 306 7.6E-91 T 31-10-2018 IPR005337 RapZ-like family GO:0005524 DY252_21870 47047f1d744f5f77198c05566c757f62 310 Pfam PF03668 P-loop ATPase protein family 25 301 3.2E-81 T 31-10-2018 IPR005337 RapZ-like family GO:0005524 DY252_02255 815a73ae6988405f2b603e5b27d7812e 594 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 270 6.1E-16 T 31-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DY252_02255 815a73ae6988405f2b603e5b27d7812e 594 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 590 3.5E-37 T 31-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain DY252_02255 815a73ae6988405f2b603e5b27d7812e 594 SUPERFAMILY SSF56645 38 279 1.15E-57 T 31-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DY252_02255 815a73ae6988405f2b603e5b27d7812e 594 Gene3D G3DSA:2.40.110.10 160 285 1.7E-27 T 31-10-2018 DY252_02255 815a73ae6988405f2b603e5b27d7812e 594 Gene3D G3DSA:1.10.540.10 11 158 2.9E-18 T 31-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DY252_02255 815a73ae6988405f2b603e5b27d7812e 594 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 450 8.0E-23 T 31-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DY252_02255 815a73ae6988405f2b603e5b27d7812e 594 Gene3D G3DSA:1.20.140.10 286 455 4.3E-46 T 31-10-2018 DY252_02255 815a73ae6988405f2b603e5b27d7812e 594 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 1.6E-12 T 31-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria DY252_02255 815a73ae6988405f2b603e5b27d7812e 594 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 156 1.2E-12 T 31-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DY252_02255 815a73ae6988405f2b603e5b27d7812e 594 SUPERFAMILY SSF47203 286 470 2.9E-48 T 31-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DY252_05110 1fc7763419ff62648e5c59ff99425ea2 240 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 239 3.6E-108 T 31-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 DY252_05110 1fc7763419ff62648e5c59ff99425ea2 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 3.1E-47 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05110 1fc7763419ff62648e5c59ff99425ea2 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.1E-47 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05110 1fc7763419ff62648e5c59ff99425ea2 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 3.1E-47 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05110 1fc7763419ff62648e5c59ff99425ea2 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 3.1E-47 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05110 1fc7763419ff62648e5c59ff99425ea2 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 3.1E-47 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05110 1fc7763419ff62648e5c59ff99425ea2 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 3.1E-47 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05110 1fc7763419ff62648e5c59ff99425ea2 240 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 178 4.4E-5 T 31-10-2018 DY252_05110 1fc7763419ff62648e5c59ff99425ea2 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.5E-16 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05110 1fc7763419ff62648e5c59ff99425ea2 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.5E-16 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05110 1fc7763419ff62648e5c59ff99425ea2 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 1.5E-16 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05110 1fc7763419ff62648e5c59ff99425ea2 240 Gene3D G3DSA:3.40.50.720 1 240 6.6E-79 T 31-10-2018 DY252_05110 1fc7763419ff62648e5c59ff99425ea2 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 238 1.5E-60 T 31-10-2018 DY252_05110 1fc7763419ff62648e5c59ff99425ea2 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_05110 1fc7763419ff62648e5c59ff99425ea2 240 SUPERFAMILY SSF51735 3 239 4.87E-79 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_11290 03b9edb4d838d8a3d00e152c41d53687 360 SUPERFAMILY SSF51735 1 174 1.14E-21 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_11290 03b9edb4d838d8a3d00e152c41d53687 360 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 98 1.2E-12 T 31-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 DY252_11290 03b9edb4d838d8a3d00e152c41d53687 360 SUPERFAMILY SSF55347 123 358 1.05E-57 T 31-10-2018 DY252_11290 03b9edb4d838d8a3d00e152c41d53687 360 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 122 342 3.4E-14 T 31-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 DY252_11290 03b9edb4d838d8a3d00e152c41d53687 360 Gene3D G3DSA:3.40.50.720 3 350 2.8E-66 T 31-10-2018 DY252_11290 03b9edb4d838d8a3d00e152c41d53687 360 Gene3D G3DSA:3.30.360.10 123 310 2.8E-66 T 31-10-2018 DY252_11940 e47dcf704d0d019db146388c75d1431c 645 SUPERFAMILY SSF52954 533 638 2.87E-24 T 31-10-2018 DY252_11940 e47dcf704d0d019db146388c75d1431c 645 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 633 2.6E-202 T 31-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DY252_11940 e47dcf704d0d019db146388c75d1431c 645 Pfam PF02824 TGS domain 5 61 1.2E-8 T 31-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DY252_11940 e47dcf704d0d019db146388c75d1431c 645 Gene3D G3DSA:3.40.50.800 536 644 1.2E-25 T 31-10-2018 IPR036621 Anticodon-binding domain superfamily DY252_11940 e47dcf704d0d019db146388c75d1431c 645 Gene3D G3DSA:3.10.20.30 1 63 4.2E-20 T 31-10-2018 IPR012675 Beta-grasp domain superfamily DY252_11940 e47dcf704d0d019db146388c75d1431c 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 511 524 3.3E-51 T 31-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DY252_11940 e47dcf704d0d019db146388c75d1431c 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 366 389 3.3E-51 T 31-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DY252_11940 e47dcf704d0d019db146388c75d1431c 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 333 361 3.3E-51 T 31-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DY252_11940 e47dcf704d0d019db146388c75d1431c 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 538 550 3.3E-51 T 31-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DY252_11940 e47dcf704d0d019db146388c75d1431c 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 468 496 3.3E-51 T 31-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DY252_11940 e47dcf704d0d019db146388c75d1431c 645 SMART SM00863 169 219 4.5E-27 T 31-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DY252_11940 e47dcf704d0d019db146388c75d1431c 645 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 638 32.862 T 31-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DY252_11940 e47dcf704d0d019db146388c75d1431c 645 Gene3D G3DSA:3.30.980.10 70 221 1.5E-64 T 31-10-2018 DY252_11940 e47dcf704d0d019db146388c75d1431c 645 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 219 3.7E-15 T 31-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DY252_11940 e47dcf704d0d019db146388c75d1431c 645 SUPERFAMILY SSF55186 66 241 3.4E-66 T 31-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DY252_11940 e47dcf704d0d019db146388c75d1431c 645 SUPERFAMILY SSF81271 2 61 2.19E-14 T 31-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DY252_11940 e47dcf704d0d019db146388c75d1431c 645 SUPERFAMILY SSF55681 243 530 4.98E-97 T 31-10-2018 DY252_11940 e47dcf704d0d019db146388c75d1431c 645 Pfam PF03129 Anticodon binding domain 546 632 2.5E-15 T 31-10-2018 IPR004154 Anticodon-binding DY252_11940 e47dcf704d0d019db146388c75d1431c 645 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 325 533 1.2E-39 T 31-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_11940 e47dcf704d0d019db146388c75d1431c 645 Gene3D G3DSA:3.30.930.10 223 535 2.5E-122 T 31-10-2018 DY252_11940 e47dcf704d0d019db146388c75d1431c 645 Gene3D G3DSA:3.30.54.20 130 186 1.5E-64 T 31-10-2018 DY252_03900 aa1af28c49d4dffe46f623360e316e88 243 SMART SM00100 26 143 3.1E-7 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_03900 aa1af28c49d4dffe46f623360e316e88 243 Gene3D G3DSA:2.60.120.10 42 158 2.7E-25 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_03900 aa1af28c49d4dffe46f623360e316e88 243 Pfam PF00027 Cyclic nucleotide-binding domain 46 127 2.2E-13 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_03900 aa1af28c49d4dffe46f623360e316e88 243 SUPERFAMILY SSF46785 161 232 2.27E-9 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_03900 aa1af28c49d4dffe46f623360e316e88 243 Pfam PF13545 Crp-like helix-turn-helix domain 163 229 3.0E-9 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_03900 aa1af28c49d4dffe46f623360e316e88 243 Gene3D G3DSA:1.10.10.10 160 240 2.9E-12 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_03900 aa1af28c49d4dffe46f623360e316e88 243 SUPERFAMILY SSF51206 20 157 8.9E-26 T 31-10-2018 IPR018490 Cyclic nucleotide-binding-like DY252_05010 a36a6fced62e7f86e2870d5990a5b929 366 Pfam PF08666 SAF domain 307 362 4.1E-7 T 31-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DY252_05010 a36a6fced62e7f86e2870d5990a5b929 366 Gene3D G3DSA:3.20.20.70 2 308 1.3E-86 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_05010 a36a6fced62e7f86e2870d5990a5b929 366 SUPERFAMILY SSF51569 12 313 7.33E-73 T 31-10-2018 DY252_05010 a36a6fced62e7f86e2870d5990a5b929 366 Gene3D G3DSA:3.90.1210.10 309 365 8.5E-12 T 31-10-2018 DY252_05010 a36a6fced62e7f86e2870d5990a5b929 366 SMART SM00858 303 363 4.5E-7 T 31-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DY252_05010 a36a6fced62e7f86e2870d5990a5b929 366 SUPERFAMILY SSF51269 300 362 4.19E-10 T 31-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 DY252_05010 a36a6fced62e7f86e2870d5990a5b929 366 Pfam PF03102 NeuB family 45 289 5.1E-68 T 31-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 DY252_04110 76661d252a25b25a2672d77f4b0cd075 423 SUPERFAMILY SSF51419 26 282 1.07E-80 T 31-10-2018 IPR029066 PLP-binding barrel DY252_04110 76661d252a25b25a2672d77f4b0cd075 423 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 279 9.8E-64 T 31-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DY252_04110 76661d252a25b25a2672d77f4b0cd075 423 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 415 40.642 T 31-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DY252_04110 76661d252a25b25a2672d77f4b0cd075 423 SUPERFAMILY SSF50621 255 417 6.7E-53 T 31-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DY252_04110 76661d252a25b25a2672d77f4b0cd075 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 382 404 5.9E-25 T 31-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DY252_04110 76661d252a25b25a2672d77f4b0cd075 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 5.9E-25 T 31-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DY252_04110 76661d252a25b25a2672d77f4b0cd075 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 5.9E-25 T 31-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DY252_04110 76661d252a25b25a2672d77f4b0cd075 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 5.9E-25 T 31-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DY252_04110 76661d252a25b25a2672d77f4b0cd075 423 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 8 413 3.5E-148 T 31-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DY252_04110 76661d252a25b25a2672d77f4b0cd075 423 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 31-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site DY252_04110 76661d252a25b25a2672d77f4b0cd075 423 Gene3D G3DSA:2.40.37.10 16 411 1.2E-149 T 31-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DY252_04110 76661d252a25b25a2672d77f4b0cd075 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 7.6E-23 T 31-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DY252_04110 76661d252a25b25a2672d77f4b0cd075 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 7.6E-23 T 31-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DY252_04110 76661d252a25b25a2672d77f4b0cd075 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 7.6E-23 T 31-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DY252_04110 76661d252a25b25a2672d77f4b0cd075 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 7.6E-23 T 31-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DY252_04110 76661d252a25b25a2672d77f4b0cd075 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 372 385 7.6E-23 T 31-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DY252_04110 76661d252a25b25a2672d77f4b0cd075 423 Gene3D G3DSA:3.20.20.10 34 275 1.2E-149 T 31-10-2018 IPR029066 PLP-binding barrel DY252_04110 76661d252a25b25a2672d77f4b0cd075 423 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 280 372 2.2E-27 T 31-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 DY252_08720 dc573fa4a3227c31320ca080cc9365ad 497 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 15 190 1.4E-58 T 31-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DY252_08720 dc573fa4a3227c31320ca080cc9365ad 497 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 192 492 2.8E-120 T 31-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DY252_08720 dc573fa4a3227c31320ca080cc9365ad 497 SUPERFAMILY SSF51735 8 193 7.88E-58 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_08720 dc573fa4a3227c31320ca080cc9365ad 497 Gene3D G3DSA:3.30.360.10 179 493 3.6E-127 T 31-10-2018 DY252_08720 dc573fa4a3227c31320ca080cc9365ad 497 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 11 493 86.766 T 31-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DY252_08720 dc573fa4a3227c31320ca080cc9365ad 497 PIRSF PIRSF000110 1 495 4.8E-183 T 31-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DY252_08720 dc573fa4a3227c31320ca080cc9365ad 497 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 180 186 - T 31-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DY252_08720 dc573fa4a3227c31320ca080cc9365ad 497 Gene3D G3DSA:3.40.50.720 9 178 1.3E-46 T 31-10-2018 DY252_08720 dc573fa4a3227c31320ca080cc9365ad 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 146 159 8.7E-50 T 31-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DY252_08720 dc573fa4a3227c31320ca080cc9365ad 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 240 256 8.7E-50 T 31-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DY252_08720 dc573fa4a3227c31320ca080cc9365ad 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 222 239 8.7E-50 T 31-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DY252_08720 dc573fa4a3227c31320ca080cc9365ad 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 331 357 8.7E-50 T 31-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DY252_08720 dc573fa4a3227c31320ca080cc9365ad 497 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 170 198 8.7E-50 T 31-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DY252_08720 dc573fa4a3227c31320ca080cc9365ad 497 SUPERFAMILY SSF55347 185 492 2.29E-118 T 31-10-2018 DY252_08720 dc573fa4a3227c31320ca080cc9365ad 497 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 13 493 9.7E-186 T 31-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DY252_05125 ad14a0098f712af60924a745f88758e0 209 Gene3D G3DSA:3.40.50.300 5 208 7.8E-56 T 31-10-2018 DY252_05125 ad14a0098f712af60924a745f88758e0 209 SUPERFAMILY SSF52540 18 207 1.29E-34 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_05125 ad14a0098f712af60924a745f88758e0 209 Pfam PF13671 AAA domain 23 172 1.4E-6 T 31-10-2018 DY252_01670 a222ebf9f1a3a52a4876314203d5a02d 406 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 197 318 1.5E-7 T 31-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DY252_01670 a222ebf9f1a3a52a4876314203d5a02d 406 Gene3D G3DSA:3.40.50.2000 189 355 7.4E-10 T 31-10-2018 DY252_01670 a222ebf9f1a3a52a4876314203d5a02d 406 SUPERFAMILY SSF53756 86 353 1.19E-24 T 31-10-2018 DY252_17615 a20f3d7932d34ff906abc0eeaa71cd5f 446 SUPERFAMILY SSF64518 1 446 1.7E-66 T 31-10-2018 DY252_17615 a20f3d7932d34ff906abc0eeaa71cd5f 446 Gene3D G3DSA:1.20.1330.10 44 262 4.1E-25 T 31-10-2018 DY252_17615 a20f3d7932d34ff906abc0eeaa71cd5f 446 Gene3D G3DSA:1.20.1330.10 280 396 1.7E-9 T 31-10-2018 DY252_17615 a20f3d7932d34ff906abc0eeaa71cd5f 446 Gene3D G3DSA:1.10.8.410 397 446 5.9E-21 T 31-10-2018 DY252_17615 a20f3d7932d34ff906abc0eeaa71cd5f 446 Pfam PF00700 Bacterial flagellin C-terminal helical region 361 445 3.4E-22 T 31-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DY252_17615 a20f3d7932d34ff906abc0eeaa71cd5f 446 PRINTS PR00207 Flagellin signature 37 54 5.9E-16 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_17615 a20f3d7932d34ff906abc0eeaa71cd5f 446 PRINTS PR00207 Flagellin signature 111 134 5.9E-16 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_17615 a20f3d7932d34ff906abc0eeaa71cd5f 446 PRINTS PR00207 Flagellin signature 76 95 5.9E-16 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_17615 a20f3d7932d34ff906abc0eeaa71cd5f 446 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 140 7.3E-30 T 31-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DY252_17610 a20f3d7932d34ff906abc0eeaa71cd5f 446 SUPERFAMILY SSF64518 1 446 1.7E-66 T 31-10-2018 DY252_17610 a20f3d7932d34ff906abc0eeaa71cd5f 446 Gene3D G3DSA:1.20.1330.10 44 262 4.1E-25 T 31-10-2018 DY252_17610 a20f3d7932d34ff906abc0eeaa71cd5f 446 Gene3D G3DSA:1.20.1330.10 280 396 1.7E-9 T 31-10-2018 DY252_17610 a20f3d7932d34ff906abc0eeaa71cd5f 446 Gene3D G3DSA:1.10.8.410 397 446 5.9E-21 T 31-10-2018 DY252_17610 a20f3d7932d34ff906abc0eeaa71cd5f 446 Pfam PF00700 Bacterial flagellin C-terminal helical region 361 445 3.4E-22 T 31-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DY252_17610 a20f3d7932d34ff906abc0eeaa71cd5f 446 PRINTS PR00207 Flagellin signature 37 54 5.9E-16 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_17610 a20f3d7932d34ff906abc0eeaa71cd5f 446 PRINTS PR00207 Flagellin signature 111 134 5.9E-16 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_17610 a20f3d7932d34ff906abc0eeaa71cd5f 446 PRINTS PR00207 Flagellin signature 76 95 5.9E-16 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_17610 a20f3d7932d34ff906abc0eeaa71cd5f 446 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 140 7.3E-30 T 31-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DY252_19535 fbb8e9822a50856bbaf77c44b09c9abe 213 Gene3D G3DSA:3.40.50.300 21 205 1.7E-49 T 31-10-2018 DY252_19535 fbb8e9822a50856bbaf77c44b09c9abe 213 SUPERFAMILY SSF52540 33 200 8.44E-26 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_19535 fbb8e9822a50856bbaf77c44b09c9abe 213 PRINTS PR01100 Shikimate kinase family signature 61 74 3.4E-19 T 31-10-2018 DY252_19535 fbb8e9822a50856bbaf77c44b09c9abe 213 PRINTS PR01100 Shikimate kinase family signature 128 145 3.4E-19 T 31-10-2018 DY252_19535 fbb8e9822a50856bbaf77c44b09c9abe 213 PRINTS PR01100 Shikimate kinase family signature 37 52 3.4E-19 T 31-10-2018 DY252_19535 fbb8e9822a50856bbaf77c44b09c9abe 213 PRINTS PR01100 Shikimate kinase family signature 89 97 3.4E-19 T 31-10-2018 DY252_19535 fbb8e9822a50856bbaf77c44b09c9abe 213 PRINTS PR01100 Shikimate kinase family signature 107 116 3.4E-19 T 31-10-2018 DY252_19535 fbb8e9822a50856bbaf77c44b09c9abe 213 ProSitePatterns PS01128 Shikimate kinase signature. 90 115 - T 31-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DY252_19535 fbb8e9822a50856bbaf77c44b09c9abe 213 Pfam PF01202 Shikimate kinase 43 196 1.4E-45 T 31-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DY252_19535 fbb8e9822a50856bbaf77c44b09c9abe 213 Hamap MF_00109 Shikimate kinase [aroK]. 34 199 26.85 T 31-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DY252_12710 e3b80f01ecba453c4518db4ee4b4a54b 182 Gene3D G3DSA:3.40.630.30 16 177 9.5E-45 T 31-10-2018 DY252_12710 e3b80f01ecba453c4518db4ee4b4a54b 182 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 18 173 1.3E-51 T 31-10-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00260+2.3.1.178 DY252_12710 e3b80f01ecba453c4518db4ee4b4a54b 182 Pfam PF00583 Acetyltransferase (GNAT) family 53 134 1.7E-10 T 31-10-2018 IPR000182 GNAT domain DY252_12710 e3b80f01ecba453c4518db4ee4b4a54b 182 SUPERFAMILY SSF55729 14 136 1.72E-17 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_03285 9a48e38c3991f5c2fef9d917ebd75123 206 SUPERFAMILY SSF52540 3 196 6.93E-35 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_03285 9a48e38c3991f5c2fef9d917ebd75123 206 Gene3D G3DSA:3.40.50.300 5 200 3.5E-48 T 31-10-2018 DY252_03285 9a48e38c3991f5c2fef9d917ebd75123 206 PIRSF PIRSF005624 2 206 4.4E-48 T 31-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 DY252_03285 9a48e38c3991f5c2fef9d917ebd75123 206 Hamap MF_01389 Urease accessory protein UreG [ureG]. 3 201 46.636 T 31-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 DY252_03285 9a48e38c3991f5c2fef9d917ebd75123 206 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 177 5.5E-37 T 31-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DY252_03285 9a48e38c3991f5c2fef9d917ebd75123 206 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 5 195 2.5E-103 T 31-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 DY252_13570 cc6555ce3bb4e462bc29acd030954e6f 370 SUPERFAMILY SSF55785 18 108 7.5E-10 T 31-10-2018 IPR035965 PAS domain superfamily DY252_13570 cc6555ce3bb4e462bc29acd030954e6f 370 Gene3D G3DSA:3.30.565.10 212 370 2.1E-42 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_13570 cc6555ce3bb4e462bc29acd030954e6f 370 SUPERFAMILY SSF55874 202 369 9.17E-44 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_13570 cc6555ce3bb4e462bc29acd030954e6f 370 SUPERFAMILY SSF47384 130 214 4.51E-19 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_13570 cc6555ce3bb4e462bc29acd030954e6f 370 Gene3D G3DSA:3.30.450.20 17 117 1.1E-8 T 31-10-2018 DY252_13570 cc6555ce3bb4e462bc29acd030954e6f 370 Pfam PF13426 PAS domain 26 112 4.8E-7 T 31-10-2018 IPR000014 PAS domain DY252_13570 cc6555ce3bb4e462bc29acd030954e6f 370 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 260 369 1.4E-25 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_13570 cc6555ce3bb4e462bc29acd030954e6f 370 Pfam PF00512 His Kinase A (phospho-acceptor) domain 145 213 2.2E-15 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_13570 cc6555ce3bb4e462bc29acd030954e6f 370 SMART SM00387 259 370 3.5E-32 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_13570 cc6555ce3bb4e462bc29acd030954e6f 370 SMART SM00388 145 213 5.0E-17 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_13570 cc6555ce3bb4e462bc29acd030954e6f 370 Gene3D G3DSA:1.10.287.130 118 211 6.6E-22 T 31-10-2018 DY252_20595 73e7c729604ba5270d4977b958c87ac0 359 Gene3D G3DSA:1.10.1530.10 39 354 1.0E-90 T 31-10-2018 DY252_20595 73e7c729604ba5270d4977b958c87ac0 359 Pfam PF02615 Malate/L-lactate dehydrogenase 31 355 3.2E-93 T 31-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 DY252_20595 73e7c729604ba5270d4977b958c87ac0 359 Gene3D G3DSA:3.30.1370.60 89 328 1.0E-90 T 31-10-2018 DY252_20595 73e7c729604ba5270d4977b958c87ac0 359 Gene3D G3DSA:3.30.60.50 206 253 1.0E-90 T 31-10-2018 DY252_20595 73e7c729604ba5270d4977b958c87ac0 359 SUPERFAMILY SSF89733 28 357 4.71E-94 T 31-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 DY252_13095 4dca84f2f372762548533dad0c968c0f 110 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 16.243 T 31-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_13095 4dca84f2f372762548533dad0c968c0f 110 Pfam PF01192 RNA polymerase Rpb6 8 55 1.0E-13 T 31-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DY252_13095 4dca84f2f372762548533dad0c968c0f 110 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 55 8.9E-18 T 31-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DY252_13095 4dca84f2f372762548533dad0c968c0f 110 SUPERFAMILY SSF63562 1 80 1.19E-20 T 31-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DY252_13095 4dca84f2f372762548533dad0c968c0f 110 Gene3D G3DSA:3.90.940.10 1 110 2.6E-24 T 31-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DY252_13095 4dca84f2f372762548533dad0c968c0f 110 SMART SM01409 8 60 2.9E-13 T 31-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DY252_18875 fe8f99f32f55d19b55c02b513eeced76 354 Pfam PF08402 TOBE domain 271 345 1.4E-11 T 31-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DY252_18875 fe8f99f32f55d19b55c02b513eeced76 354 Gene3D G3DSA:2.40.50.940 222 346 6.1E-28 T 31-10-2018 DY252_18875 fe8f99f32f55d19b55c02b513eeced76 354 Gene3D G3DSA:3.40.50.300 3 221 2.1E-64 T 31-10-2018 DY252_18875 fe8f99f32f55d19b55c02b513eeced76 354 Gene3D G3DSA:2.40.50.140 278 337 6.1E-28 T 31-10-2018 DY252_18875 fe8f99f32f55d19b55c02b513eeced76 354 SMART SM00382 28 211 2.1E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_18875 fe8f99f32f55d19b55c02b513eeced76 354 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_18875 fe8f99f32f55d19b55c02b513eeced76 354 Pfam PF00005 ABC transporter 20 161 2.1E-33 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_18875 fe8f99f32f55d19b55c02b513eeced76 354 SUPERFAMILY SSF50331 236 350 2.24E-22 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_18875 fe8f99f32f55d19b55c02b513eeced76 354 SUPERFAMILY SSF52540 4 243 6.33E-84 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_09125 76c50c39c50a33e036d6f8b2a0db9f8a 130 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 8 126 18.874 T 31-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DY252_09125 76c50c39c50a33e036d6f8b2a0db9f8a 130 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 11 119 3.2E-24 T 31-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DY252_09125 76c50c39c50a33e036d6f8b2a0db9f8a 130 TIGRFAM TIGR00494 crcB: protein CrcB 10 120 2.4E-26 T 31-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DY252_12270 60734acd5e0444a090566bd47470a559 292 Gene3D G3DSA:1.10.3720.10 50 291 2.2E-46 T 31-10-2018 IPR035906 MetI-like superfamily DY252_12270 60734acd5e0444a090566bd47470a559 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 291 7.1E-9 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_12270 60734acd5e0444a090566bd47470a559 292 SUPERFAMILY SSF161098 54 281 9.29E-41 T 31-10-2018 IPR035906 MetI-like superfamily DY252_12590 7950c0475261b5f8798e498b046e6fd0 281 Gene3D G3DSA:1.10.580.10 18 63 2.2E-8 T 31-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DY252_12590 7950c0475261b5f8798e498b046e6fd0 281 Gene3D G3DSA:1.10.580.10 64 249 7.2E-31 T 31-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DY252_12590 7950c0475261b5f8798e498b046e6fd0 281 Pfam PF00285 Citrate synthase, C-terminal domain 62 251 4.1E-30 T 31-10-2018 IPR002020 Citrate synthase GO:0046912 DY252_12590 7950c0475261b5f8798e498b046e6fd0 281 Pfam PF00285 Citrate synthase, C-terminal domain 17 63 1.0E-5 T 31-10-2018 IPR002020 Citrate synthase GO:0046912 DY252_12590 7950c0475261b5f8798e498b046e6fd0 281 Gene3D G3DSA:1.10.230.10 113 222 7.2E-31 T 31-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain DY252_12590 7950c0475261b5f8798e498b046e6fd0 281 SUPERFAMILY SSF48256 9 268 8.37E-54 T 31-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 DY252_19035 8cae85efcfb25e8b0d0eb18d60289045 453 Gene3D G3DSA:3.40.50.2300 191 416 7.0E-88 T 31-10-2018 DY252_19035 8cae85efcfb25e8b0d0eb18d60289045 453 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 33 9.4E-4 T 31-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DY252_19035 8cae85efcfb25e8b0d0eb18d60289045 453 Pfam PF13458 Periplasmic binding protein 54 415 1.0E-66 T 31-10-2018 IPR028081 Leucine-binding protein domain DY252_19035 8cae85efcfb25e8b0d0eb18d60289045 453 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 9 32 2.8E-6 T 31-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DY252_19035 8cae85efcfb25e8b0d0eb18d60289045 453 SUPERFAMILY SSF53822 55 441 9.76E-82 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_19035 8cae85efcfb25e8b0d0eb18d60289045 453 Gene3D G3DSA:3.40.50.2300 105 409 7.0E-88 T 31-10-2018 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 Gene3D G3DSA:3.50.50.60 146 266 2.6E-97 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 SUPERFAMILY SSF55424 339 456 7.39E-34 T 31-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 PIRSF PIRSF000350 2 456 8.1E-100 T 31-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 342 446 3.8E-27 T 31-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 Gene3D G3DSA:3.30.390.30 341 458 9.4E-36 T 31-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 8.2E-28 T 31-10-2018 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 8.2E-28 T 31-10-2018 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 8.2E-28 T 31-10-2018 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 8.2E-28 T 31-10-2018 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.2E-28 T 31-10-2018 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 31-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 1.3E-60 T 31-10-2018 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.3E-60 T 31-10-2018 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 1.3E-60 T 31-10-2018 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 1.3E-60 T 31-10-2018 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 1.3E-60 T 31-10-2018 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 1.3E-60 T 31-10-2018 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 338 359 1.3E-60 T 31-10-2018 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 1.3E-60 T 31-10-2018 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 1.3E-60 T 31-10-2018 DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 Gene3D G3DSA:3.50.50.60 8 328 2.6E-97 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 SUPERFAMILY SSF51905 6 368 1.08E-58 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_21530 07a9e4c461b66db0cea2a656036dbcd8 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 320 1.1E-54 T 31-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DY252_17430 552af85c9721ea9614bcacb249b5cfd8 667 SMART SM00283 322 569 2.7E-42 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_17430 552af85c9721ea9614bcacb249b5cfd8 667 SUPERFAMILY SSF141371 574 659 8.24E-9 T 31-10-2018 DY252_17430 552af85c9721ea9614bcacb249b5cfd8 667 Gene3D G3DSA:2.40.10.220 577 666 2.6E-7 T 31-10-2018 DY252_17430 552af85c9721ea9614bcacb249b5cfd8 667 Pfam PF07238 PilZ domain 577 662 1.5E-9 T 31-10-2018 IPR009875 PilZ domain GO:0035438 DY252_17430 552af85c9721ea9614bcacb249b5cfd8 667 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 392 536 1.1E-32 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_17430 552af85c9721ea9614bcacb249b5cfd8 667 SUPERFAMILY SSF58104 253 564 3.92E-58 T 31-10-2018 DY252_17430 552af85c9721ea9614bcacb249b5cfd8 667 Gene3D G3DSA:1.20.1480.50 189 284 7.8E-12 T 31-10-2018 DY252_17430 552af85c9721ea9614bcacb249b5cfd8 667 Gene3D G3DSA:1.10.287.950 285 576 7.6E-53 T 31-10-2018 DY252_17430 552af85c9721ea9614bcacb249b5cfd8 667 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 1.9E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_17430 552af85c9721ea9614bcacb249b5cfd8 667 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 335 364 1.9E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_17430 552af85c9721ea9614bcacb249b5cfd8 667 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 413 440 1.9E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_17430 552af85c9721ea9614bcacb249b5cfd8 667 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 490 519 1.9E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_13440 03f0a24f12250ac41293da75212ff02f 667 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 45 662 2.4E-256 T 31-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13440 03f0a24f12250ac41293da75212ff02f 667 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 291 313 8.8E-11 T 31-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DY252_13440 03f0a24f12250ac41293da75212ff02f 667 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 103 123 8.8E-11 T 31-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DY252_13440 03f0a24f12250ac41293da75212ff02f 667 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 445 467 8.8E-11 T 31-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DY252_13440 03f0a24f12250ac41293da75212ff02f 667 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 77 101 8.8E-11 T 31-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DY252_13440 03f0a24f12250ac41293da75212ff02f 667 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 83 140 2.2E-25 T 31-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13440 03f0a24f12250ac41293da75212ff02f 667 Pfam PF00361 Proton-conducting membrane transporter 152 445 4.3E-90 T 31-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13440 03f0a24f12250ac41293da75212ff02f 667 Pfam PF06455 NADH dehydrogenase subunit 5 C-terminus 539 656 9.4E-7 T 31-10-2018 IPR010934 NADH dehydrogenase subunit 5, C-terminal GO:0008137|GO:0042773|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13440 03f0a24f12250ac41293da75212ff02f 667 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 341 353 1.2E-64 T 31-10-2018 DY252_13440 03f0a24f12250ac41293da75212ff02f 667 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 446 465 1.2E-64 T 31-10-2018 DY252_13440 03f0a24f12250ac41293da75212ff02f 667 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 273 299 1.2E-64 T 31-10-2018 DY252_13440 03f0a24f12250ac41293da75212ff02f 667 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 251 272 1.2E-64 T 31-10-2018 DY252_13440 03f0a24f12250ac41293da75212ff02f 667 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 176 197 1.2E-64 T 31-10-2018 DY252_13440 03f0a24f12250ac41293da75212ff02f 667 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 101 126 1.2E-64 T 31-10-2018 DY252_13440 03f0a24f12250ac41293da75212ff02f 667 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 129 149 1.2E-64 T 31-10-2018 DY252_08165 5cc150b3c82ba8b350713bc2538ded41 225 SMART SM00345 11 70 1.1E-19 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_08165 5cc150b3c82ba8b350713bc2538ded41 225 Pfam PF07729 FCD domain 89 211 2.4E-22 T 31-10-2018 IPR011711 GntR, C-terminal DY252_08165 5cc150b3c82ba8b350713bc2538ded41 225 SUPERFAMILY SSF46785 3 74 2.32E-18 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_08165 5cc150b3c82ba8b350713bc2538ded41 225 Gene3D G3DSA:1.10.10.10 1 75 2.0E-19 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_08165 5cc150b3c82ba8b350713bc2538ded41 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 5.5E-10 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_08165 5cc150b3c82ba8b350713bc2538ded41 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 5.5E-10 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_08165 5cc150b3c82ba8b350713bc2538ded41 225 Gene3D G3DSA:1.20.120.530 88 218 1.6E-23 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_08165 5cc150b3c82ba8b350713bc2538ded41 225 SMART SM00895 89 213 6.5E-18 T 31-10-2018 IPR011711 GntR, C-terminal DY252_08165 5cc150b3c82ba8b350713bc2538ded41 225 SUPERFAMILY SSF48008 89 216 6.54E-24 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_08165 5cc150b3c82ba8b350713bc2538ded41 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 7.4E-18 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_16280 05e9981de9b8936085ee0fe52c8cebb3 801 Gene3D G3DSA:2.40.170.20 252 801 8.5E-45 T 31-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DY252_16280 05e9981de9b8936085ee0fe52c8cebb3 801 Pfam PF00593 TonB dependent receptor 346 798 2.6E-21 T 31-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DY252_16280 05e9981de9b8936085ee0fe52c8cebb3 801 SMART SM00965 54 104 9.6E-5 T 31-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 DY252_16280 05e9981de9b8936085ee0fe52c8cebb3 801 Pfam PF07715 TonB-dependent Receptor Plug Domain 135 234 5.6E-10 T 31-10-2018 IPR012910 TonB-dependent receptor, plug domain DY252_16280 05e9981de9b8936085ee0fe52c8cebb3 801 Gene3D G3DSA:3.55.50.30 23 129 1.5E-15 T 31-10-2018 DY252_16280 05e9981de9b8936085ee0fe52c8cebb3 801 Gene3D G3DSA:2.170.130.10 133 245 1.3E-12 T 31-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DY252_16280 05e9981de9b8936085ee0fe52c8cebb3 801 SUPERFAMILY SSF56935 119 801 1.65E-67 T 31-10-2018 DY252_07200 8978bdc763dc9c044572f21501d20e94 445 Pfam PF08666 SAF domain 361 426 1.2E-4 T 31-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DY252_07200 8978bdc763dc9c044572f21501d20e94 445 Gene3D G3DSA:3.40.50.720 10 181 1.7E-21 T 31-10-2018 DY252_07200 8978bdc763dc9c044572f21501d20e94 445 SUPERFAMILY SSF51735 14 146 6.3E-21 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_07200 8978bdc763dc9c044572f21501d20e94 445 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 55 133 2.0E-5 T 31-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 DY252_07200 8978bdc763dc9c044572f21501d20e94 445 SMART SM00858 361 426 6.6E-6 T 31-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DY252_07180 2d1dc9cea04b5c7db30a16513b33ea8f 205 Gene3D G3DSA:1.20.1050.10 83 192 1.3E-23 T 31-10-2018 DY252_07180 2d1dc9cea04b5c7db30a16513b33ea8f 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 73 6.9E-18 T 31-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DY252_07180 2d1dc9cea04b5c7db30a16513b33ea8f 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 130 189 6.1E-7 T 31-10-2018 IPR004046 Glutathione S-transferase, C-terminal DY252_07180 2d1dc9cea04b5c7db30a16513b33ea8f 205 SUPERFAMILY SSF52833 1 84 2.64E-26 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_07180 2d1dc9cea04b5c7db30a16513b33ea8f 205 SUPERFAMILY SSF47616 79 194 2.51E-24 T 31-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DY252_07180 2d1dc9cea04b5c7db30a16513b33ea8f 205 Gene3D G3DSA:3.40.30.10 1 76 6.1E-24 T 31-10-2018 DY252_07400 cff5870f70362f71683ab5214fb17ae0 166 Pfam PF00731 AIR carboxylase 8 154 2.5E-64 T 31-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DY252_07400 cff5870f70362f71683ab5214fb17ae0 166 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 8 160 2.3E-65 T 31-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DY252_07400 cff5870f70362f71683ab5214fb17ae0 166 SUPERFAMILY SSF52255 7 161 4.06E-66 T 31-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 DY252_07400 cff5870f70362f71683ab5214fb17ae0 166 SMART SM01001 6 157 2.9E-101 T 31-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DY252_07400 cff5870f70362f71683ab5214fb17ae0 166 PIRSF PIRSF001338 3 163 2.6E-67 T 31-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 DY252_07400 cff5870f70362f71683ab5214fb17ae0 166 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 8 161 33.029 T 31-10-2018 IPR033747 Class I PurE DY252_07400 cff5870f70362f71683ab5214fb17ae0 166 Gene3D G3DSA:3.40.50.7700 1 164 3.4E-72 T 31-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 DY252_06390 4549c00c2fe13ab767b89ab1bf52166f 350 Gene3D G3DSA:3.20.20.100 20 346 3.8E-118 T 31-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DY252_06390 4549c00c2fe13ab767b89ab1bf52166f 350 Pfam PF00248 Aldo/keto reductase family 32 331 2.6E-71 T 31-10-2018 IPR023210 NADP-dependent oxidoreductase domain DY252_06390 4549c00c2fe13ab767b89ab1bf52166f 350 SUPERFAMILY SSF51430 22 331 2.1E-90 T 31-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DY252_11875 8d4f6f1c3817cb55cbb07334d1798a0a 651 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 5 650 6.8E-293 T 31-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 DY252_11875 8d4f6f1c3817cb55cbb07334d1798a0a 651 Pfam PF13193 AMP-binding enzyme C-terminal domain 541 613 1.5E-7 T 31-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DY252_11875 8d4f6f1c3817cb55cbb07334d1798a0a 651 Gene3D G3DSA:3.40.50.12780 77 521 1.4E-60 T 31-10-2018 DY252_11875 8d4f6f1c3817cb55cbb07334d1798a0a 651 ProSitePatterns PS00455 Putative AMP-binding domain signature. 269 280 - T 31-10-2018 IPR020845 AMP-binding, conserved site DY252_11875 8d4f6f1c3817cb55cbb07334d1798a0a 651 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 38 93 3.4E-7 T 31-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 DY252_11875 8d4f6f1c3817cb55cbb07334d1798a0a 651 SUPERFAMILY SSF56801 37 627 6.15E-130 T 31-10-2018 DY252_11875 8d4f6f1c3817cb55cbb07334d1798a0a 651 Pfam PF00501 AMP-binding enzyme 100 525 5.2E-51 T 31-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DY252_11875 8d4f6f1c3817cb55cbb07334d1798a0a 651 Gene3D G3DSA:3.30.300.30 525 647 1.1E-15 T 31-10-2018 DY252_01405 3ebf1cce60d527891539ec42e685d4bd 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 103 119 3.9E-5 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_01405 3ebf1cce60d527891539ec42e685d4bd 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 99 3.9E-5 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_01405 3ebf1cce60d527891539ec42e685d4bd 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 83 3.9E-5 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_01405 3ebf1cce60d527891539ec42e685d4bd 159 Gene3D G3DSA:1.10.10.10 20 156 8.5E-33 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_01405 3ebf1cce60d527891539ec42e685d4bd 159 SUPERFAMILY SSF46785 19 153 3.11E-31 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_01405 3ebf1cce60d527891539ec42e685d4bd 159 Pfam PF12802 MarR family 48 107 1.6E-10 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_01405 3ebf1cce60d527891539ec42e685d4bd 159 SMART SM00347 43 143 1.4E-14 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_13545 e685b785e6dd224d886e88cc1b61fe10 490 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 420 1.3E-40 T 31-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 DY252_13545 e685b785e6dd224d886e88cc1b61fe10 490 Hamap MF_00303 Trigger factor [tig]. 1 425 22.227 T 31-10-2018 IPR005215 Trigger factor GO:0015031 DY252_13545 e685b785e6dd224d886e88cc1b61fe10 490 SUPERFAMILY SSF109998 250 436 6.99E-47 T 31-10-2018 IPR027304 Trigger factor/SurA domain superfamily DY252_13545 e685b785e6dd224d886e88cc1b61fe10 490 PIRSF PIRSF003095 1 442 2.9E-127 T 31-10-2018 IPR005215 Trigger factor GO:0015031 DY252_13545 e685b785e6dd224d886e88cc1b61fe10 490 SUPERFAMILY SSF102735 1 131 1.7E-35 T 31-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 DY252_13545 e685b785e6dd224d886e88cc1b61fe10 490 Gene3D G3DSA:1.10.3120.10 116 424 8.6E-91 T 31-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 DY252_13545 e685b785e6dd224d886e88cc1b61fe10 490 TIGRFAM TIGR00115 tig: trigger factor 12 419 1.4E-133 T 31-10-2018 IPR005215 Trigger factor GO:0015031 DY252_13545 e685b785e6dd224d886e88cc1b61fe10 490 Gene3D G3DSA:3.10.50.40 150 248 8.6E-91 T 31-10-2018 DY252_13545 e685b785e6dd224d886e88cc1b61fe10 490 Gene3D G3DSA:3.30.70.1050 1 115 3.9E-34 T 31-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 DY252_13545 e685b785e6dd224d886e88cc1b61fe10 490 SUPERFAMILY SSF54534 88 244 3.93E-35 T 31-10-2018 DY252_13545 e685b785e6dd224d886e88cc1b61fe10 490 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 239 2.3E-15 T 31-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DY252_13545 e685b785e6dd224d886e88cc1b61fe10 490 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 7.6E-37 T 31-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 DY252_05330 2b8df6fbf006d2271502fcfe14e47915 310 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 117 1.8E-49 T 31-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DY252_05330 2b8df6fbf006d2271502fcfe14e47915 310 SUPERFAMILY SSF53271 66 301 2.96E-61 T 31-10-2018 IPR029057 Phosphoribosyltransferase-like DY252_05330 2b8df6fbf006d2271502fcfe14e47915 310 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 1 310 49.259 T 31-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DY252_05330 2b8df6fbf006d2271502fcfe14e47915 310 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 310 4.9E-118 T 31-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DY252_05330 2b8df6fbf006d2271502fcfe14e47915 310 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 125 140 - T 31-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DY252_05330 2b8df6fbf006d2271502fcfe14e47915 310 Gene3D G3DSA:3.40.50.2020 144 286 1.3E-122 T 31-10-2018 DY252_05330 2b8df6fbf006d2271502fcfe14e47915 310 Gene3D G3DSA:3.40.50.2020 5 298 1.3E-122 T 31-10-2018 DY252_05330 2b8df6fbf006d2271502fcfe14e47915 310 Pfam PF14572 Phosphoribosyl synthetase-associated domain 201 309 9.4E-25 T 31-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DY252_05330 2b8df6fbf006d2271502fcfe14e47915 310 SMART SM01400 1 117 9.0E-79 T 31-10-2018 DY252_09140 e5363a214c0ac76077fd0930c25fa215 232 Gene3D G3DSA:1.10.150.240 21 90 2.3E-49 T 31-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DY252_09140 e5363a214c0ac76077fd0930c25fa215 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 192 7.5E-30 T 31-10-2018 DY252_09140 e5363a214c0ac76077fd0930c25fa215 232 SUPERFAMILY SSF56784 4 225 1.2E-56 T 31-10-2018 IPR036412 HAD-like superfamily DY252_09140 e5363a214c0ac76077fd0930c25fa215 232 Gene3D G3DSA:3.40.50.1000 9 211 2.3E-49 T 31-10-2018 IPR023214 HAD superfamily DY252_09140 e5363a214c0ac76077fd0930c25fa215 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 92 186 8.5E-10 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_09140 e5363a214c0ac76077fd0930c25fa215 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 129 192 3.6E-8 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_15555 884e57c07cc5eb4e874491be5266812e 607 SUPERFAMILY SSF56235 2 231 1.54E-73 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_15555 884e57c07cc5eb4e874491be5266812e 607 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 607 1.1E-245 T 31-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 DY252_15555 884e57c07cc5eb4e874491be5266812e 607 Gene3D G3DSA:3.40.50.10490 246 606 2.0E-143 T 31-10-2018 DY252_15555 884e57c07cc5eb4e874491be5266812e 607 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 607 39.534 T 31-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 DY252_15555 884e57c07cc5eb4e874491be5266812e 607 Pfam PF01380 SIS domain 460 589 1.2E-27 T 31-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DY252_15555 884e57c07cc5eb4e874491be5266812e 607 Pfam PF01380 SIS domain 287 414 3.4E-29 T 31-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DY252_15555 884e57c07cc5eb4e874491be5266812e 607 Gene3D G3DSA:3.40.50.10490 444 592 2.0E-143 T 31-10-2018 DY252_15555 884e57c07cc5eb4e874491be5266812e 607 Pfam PF13522 Glutamine amidotransferase domain 65 191 3.5E-23 T 31-10-2018 DY252_15555 884e57c07cc5eb4e874491be5266812e 607 SUPERFAMILY SSF53697 245 607 9.09E-113 T 31-10-2018 DY252_15555 884e57c07cc5eb4e874491be5266812e 607 Gene3D G3DSA:3.60.20.10 2 239 9.4E-76 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_06325 508943cfb13107dc1ea69d54cf6db48c 883 Pfam PF00809 Pterin binding enzyme 11 249 1.4E-61 T 31-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_06325 508943cfb13107dc1ea69d54cf6db48c 883 SUPERFAMILY SSF47644 301 388 1.19E-29 T 31-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_06325 508943cfb13107dc1ea69d54cf6db48c 883 SUPERFAMILY SSF51717 7 281 2.88E-92 T 31-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_06325 508943cfb13107dc1ea69d54cf6db48c 883 Gene3D G3DSA:1.10.1240.10 298 386 2.8E-40 T 31-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_06325 508943cfb13107dc1ea69d54cf6db48c 883 SMART SM01018 306 389 3.4E-45 T 31-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_06325 508943cfb13107dc1ea69d54cf6db48c 883 Gene3D G3DSA:3.10.196.10 559 876 2.2E-140 T 31-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_06325 508943cfb13107dc1ea69d54cf6db48c 883 Gene3D G3DSA:3.20.20.20 1 295 5.0E-132 T 31-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_06325 508943cfb13107dc1ea69d54cf6db48c 883 Pfam PF02607 B12 binding domain 309 381 6.3E-26 T 31-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_06325 508943cfb13107dc1ea69d54cf6db48c 883 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 589 861 4.1E-121 T 31-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_06325 508943cfb13107dc1ea69d54cf6db48c 883 PIRSF PIRSF000381 1 848 0.0 T 31-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_06325 508943cfb13107dc1ea69d54cf6db48c 883 Gene3D G3DSA:1.10.288.10 588 745 2.2E-140 T 31-10-2018 DY252_06325 508943cfb13107dc1ea69d54cf6db48c 883 Pfam PF02310 B12 binding domain 398 488 3.3E-20 T 31-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DY252_06325 508943cfb13107dc1ea69d54cf6db48c 883 SUPERFAMILY SSF56507 553 879 2.09E-129 T 31-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_06325 508943cfb13107dc1ea69d54cf6db48c 883 Gene3D G3DSA:3.40.50.280 394 546 4.1E-54 T 31-10-2018 DY252_06325 508943cfb13107dc1ea69d54cf6db48c 883 TIGRFAM TIGR02082 metH: methionine synthase 4 844 0.0 T 31-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_06325 508943cfb13107dc1ea69d54cf6db48c 883 SUPERFAMILY SSF52242 392 544 7.06E-44 T 31-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 DY252_18125 c5c1183f4d820fd8e8288b660bed82c1 265 Pfam PF00005 ABC transporter 18 174 6.7E-35 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_18125 c5c1183f4d820fd8e8288b660bed82c1 265 Gene3D G3DSA:3.40.50.300 1 264 1.7E-66 T 31-10-2018 DY252_18125 c5c1183f4d820fd8e8288b660bed82c1 265 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_18125 c5c1183f4d820fd8e8288b660bed82c1 265 SMART SM00382 27 232 4.4E-11 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_18125 c5c1183f4d820fd8e8288b660bed82c1 265 SUPERFAMILY SSF52540 1 241 2.32E-63 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18125 c5c1183f4d820fd8e8288b660bed82c1 265 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 1 242 7.1E-96 T 31-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 DY252_15460 069ea971dd63fa0ef2d057f68c950fe4 135 SUPERFAMILY SSF46955 1 119 5.13E-35 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_15460 069ea971dd63fa0ef2d057f68c950fe4 135 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 3.1E-62 T 31-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 DY252_15460 069ea971dd63fa0ef2d057f68c950fe4 135 SMART SM00422 1 70 3.3E-26 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_15460 069ea971dd63fa0ef2d057f68c950fe4 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.3E-8 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_15460 069ea971dd63fa0ef2d057f68c950fe4 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.3E-8 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_15460 069ea971dd63fa0ef2d057f68c950fe4 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.3E-8 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_15460 069ea971dd63fa0ef2d057f68c950fe4 135 Pfam PF00376 MerR family regulatory protein 2 39 1.7E-17 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_15460 069ea971dd63fa0ef2d057f68c950fe4 135 Gene3D G3DSA:1.10.1660.10 1 125 1.7E-33 T 31-10-2018 DY252_15460 069ea971dd63fa0ef2d057f68c950fe4 135 Pfam PF09278 MerR, DNA binding 47 108 2.4E-19 T 31-10-2018 IPR015358 Transcription regulator MerR, DNA binding DY252_15505 069ea971dd63fa0ef2d057f68c950fe4 135 SUPERFAMILY SSF46955 1 119 5.13E-35 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_15505 069ea971dd63fa0ef2d057f68c950fe4 135 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 3.1E-62 T 31-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 DY252_15505 069ea971dd63fa0ef2d057f68c950fe4 135 SMART SM00422 1 70 3.3E-26 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_15505 069ea971dd63fa0ef2d057f68c950fe4 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.3E-8 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_15505 069ea971dd63fa0ef2d057f68c950fe4 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.3E-8 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_15505 069ea971dd63fa0ef2d057f68c950fe4 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.3E-8 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_15505 069ea971dd63fa0ef2d057f68c950fe4 135 Pfam PF00376 MerR family regulatory protein 2 39 1.7E-17 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_15505 069ea971dd63fa0ef2d057f68c950fe4 135 Gene3D G3DSA:1.10.1660.10 1 125 1.7E-33 T 31-10-2018 DY252_15505 069ea971dd63fa0ef2d057f68c950fe4 135 Pfam PF09278 MerR, DNA binding 47 108 2.4E-19 T 31-10-2018 IPR015358 Transcription regulator MerR, DNA binding DY252_16060 0edcdefb3fbef9e65a355180aa9290d8 582 PIRSF PIRSF035859 3 582 1.2E-304 T 31-10-2018 IPR014597 ABC transporter, periplasmic substrate-binding protein, predicted GO:0005215 DY252_16060 0edcdefb3fbef9e65a355180aa9290d8 582 Pfam PF01547 Bacterial extracellular solute-binding protein 91 431 5.8E-10 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_16060 0edcdefb3fbef9e65a355180aa9290d8 582 Gene3D G3DSA:3.40.190.10 195 514 4.6E-46 T 31-10-2018 DY252_16060 0edcdefb3fbef9e65a355180aa9290d8 582 Gene3D G3DSA:3.40.190.10 93 471 4.6E-46 T 31-10-2018 DY252_16060 0edcdefb3fbef9e65a355180aa9290d8 582 SUPERFAMILY SSF53850 75 523 8.95E-65 T 31-10-2018 DY252_04700 c178b970214667c06c1c07194fb04e48 407 Gene3D G3DSA:3.30.1540.10 243 334 2.5E-147 T 31-10-2018 DY252_04700 c178b970214667c06c1c07194fb04e48 407 SUPERFAMILY SSF89796 3 407 1.57E-147 T 31-10-2018 IPR023606 CoA-transferase family III domain superfamily DY252_04700 c178b970214667c06c1c07194fb04e48 407 Pfam PF02515 CoA-transferase family III 5 382 3.4E-138 T 31-10-2018 IPR003673 CoA-transferase family III GO:0003824 DY252_04700 c178b970214667c06c1c07194fb04e48 407 Gene3D G3DSA:3.40.50.10540 5 401 2.5E-147 T 31-10-2018 IPR023606 CoA-transferase family III domain superfamily DY252_16040 6743c0659e06b866e0f6747891a5a0ce 364 SUPERFAMILY SSF52540 19 250 8.33E-61 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_16040 6743c0659e06b866e0f6747891a5a0ce 364 SUPERFAMILY SSF50331 243 357 3.16E-12 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_16040 6743c0659e06b866e0f6747891a5a0ce 364 Gene3D G3DSA:2.40.50.100 246 286 3.6E-10 T 31-10-2018 DY252_16040 6743c0659e06b866e0f6747891a5a0ce 364 Pfam PF00005 ABC transporter 33 168 3.1E-19 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_16040 6743c0659e06b866e0f6747891a5a0ce 364 Gene3D G3DSA:3.40.50.300 1 245 1.5E-57 T 31-10-2018 DY252_16040 6743c0659e06b866e0f6747891a5a0ce 364 Gene3D G3DSA:2.40.50.140 287 343 3.6E-10 T 31-10-2018 DY252_16040 6743c0659e06b866e0f6747891a5a0ce 364 SMART SM00382 34 218 2.4E-8 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_08655 7de37cba10794b8b178082a573f7cb56 233 SUPERFAMILY SSF81342 9 195 1.15E-33 T 31-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DY252_08655 7de37cba10794b8b178082a573f7cb56 233 Pfam PF01292 Prokaryotic cytochrome b561 14 188 8.6E-18 T 31-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 DY252_08655 7de37cba10794b8b178082a573f7cb56 233 Gene3D G3DSA:1.20.950.20 2 179 2.6E-16 T 31-10-2018 DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 SMART SM00091 343 410 1.6E-7 T 31-10-2018 IPR000014 PAS domain DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 SMART SM00091 215 280 1.1 T 31-10-2018 IPR000014 PAS domain DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 SMART SM00091 470 541 11.0 T 31-10-2018 IPR000014 PAS domain DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 Gene3D G3DSA:3.30.450.20 340 469 1.6E-23 T 31-10-2018 DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 SMART SM00086 289 331 4.6E-7 T 31-10-2018 IPR001610 PAC motif DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 SMART SM00086 543 585 1.9E-7 T 31-10-2018 IPR001610 PAC motif DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 SMART SM00086 416 458 4.1E-6 T 31-10-2018 IPR001610 PAC motif DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 Pfam PF13426 PAS domain 482 584 8.4E-12 T 31-10-2018 IPR000014 PAS domain DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 SUPERFAMILY SSF141868 772 1022 4.18E-86 T 31-10-2018 IPR035919 EAL domain superfamily DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 SUPERFAMILY SSF55785 328 456 5.93E-25 T 31-10-2018 IPR035965 PAS domain superfamily DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 Pfam PF00563 EAL domain 773 1009 2.4E-70 T 31-10-2018 IPR001633 EAL domain DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 SUPERFAMILY SSF55785 211 329 2.27E-16 T 31-10-2018 IPR035965 PAS domain superfamily DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 339 465 6.5E-23 T 31-10-2018 IPR000014 PAS domain DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 211 336 9.8E-15 T 31-10-2018 IPR000014 PAS domain DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 468 591 9.5E-19 T 31-10-2018 IPR000014 PAS domain DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 Gene3D G3DSA:3.30.450.20 470 594 9.6E-23 T 31-10-2018 DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 Gene3D G3DSA:3.30.450.20 212 339 2.3E-19 T 31-10-2018 DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 SUPERFAMILY SSF55073 601 759 1.1E-51 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 Gene3D G3DSA:3.30.70.270 595 770 1.8E-62 T 31-10-2018 DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 Gene3D G3DSA:3.20.20.450 771 1028 2.2E-95 T 31-10-2018 IPR035919 EAL domain superfamily DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 593 756 5.2E-43 T 31-10-2018 IPR000160 GGDEF domain DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 Pfam PF00989 PAS fold 217 328 4.5E-11 T 31-10-2018 IPR013767 PAS fold GO:0006355 DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 Pfam PF00989 PAS fold 343 455 4.2E-16 T 31-10-2018 IPR013767 PAS fold GO:0006355 DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 SUPERFAMILY SSF55785 455 583 1.92E-20 T 31-10-2018 IPR035965 PAS domain superfamily DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 Pfam PF00990 Diguanylate cyclase, GGDEF domain 596 753 3.4E-49 T 31-10-2018 IPR000160 GGDEF domain DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 SMART SM00052 767 1014 1.9E-109 T 31-10-2018 IPR001633 EAL domain DY252_16825 0a31d783b258dc9af74b24c36c2e38a8 1036 SMART SM00267 585 757 9.4E-70 T 31-10-2018 IPR000160 GGDEF domain DY252_03785 9300a6bb69493d2c9b8369f2c0344d3e 626 Gene3D G3DSA:3.40.50.11380 246 598 4.7E-139 T 31-10-2018 DY252_03785 9300a6bb69493d2c9b8369f2c0344d3e 626 Gene3D G3DSA:1.25.40.10 5 216 2.0E-37 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_03785 9300a6bb69493d2c9b8369f2c0344d3e 626 Pfam PF13844 Glycosyl transferase family 41 415 609 2.8E-53 T 31-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 DY252_03785 9300a6bb69493d2c9b8369f2c0344d3e 626 Pfam PF13844 Glycosyl transferase family 41 256 408 3.4E-24 T 31-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 DY252_03785 9300a6bb69493d2c9b8369f2c0344d3e 626 SUPERFAMILY SSF48452 114 454 1.52E-10 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_03785 9300a6bb69493d2c9b8369f2c0344d3e 626 SMART SM00028 73 106 2.9E-4 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_03785 9300a6bb69493d2c9b8369f2c0344d3e 626 SMART SM00028 141 174 0.002 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_03785 9300a6bb69493d2c9b8369f2c0344d3e 626 SMART SM00028 39 72 0.11 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_03785 9300a6bb69493d2c9b8369f2c0344d3e 626 SMART SM00028 107 140 0.001 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_03785 9300a6bb69493d2c9b8369f2c0344d3e 626 Gene3D G3DSA:3.40.50.2000 413 592 4.7E-139 T 31-10-2018 DY252_03785 9300a6bb69493d2c9b8369f2c0344d3e 626 SUPERFAMILY SSF48452 12 177 1.14E-31 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_03785 9300a6bb69493d2c9b8369f2c0344d3e 626 Pfam PF13181 Tetratricopeptide repeat 74 97 0.13 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_03785 9300a6bb69493d2c9b8369f2c0344d3e 626 Pfam PF13181 Tetratricopeptide repeat 42 70 0.11 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_03785 9300a6bb69493d2c9b8369f2c0344d3e 626 Pfam PF13181 Tetratricopeptide repeat 109 139 0.0025 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_14915 ad02df7cab3aa4f358693b326f06c5da 145 Pfam PF00364 Biotin-requiring enzyme 72 144 1.7E-17 T 31-10-2018 IPR000089 Biotin/lipoyl attachment DY252_14915 ad02df7cab3aa4f358693b326f06c5da 145 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 91 105 7.4E-10 T 31-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DY252_14915 ad02df7cab3aa4f358693b326f06c5da 145 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 106 119 7.4E-10 T 31-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DY252_14915 ad02df7cab3aa4f358693b326f06c5da 145 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 74 87 7.4E-10 T 31-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DY252_14915 ad02df7cab3aa4f358693b326f06c5da 145 SUPERFAMILY SSF51230 70 145 1.13E-20 T 31-10-2018 IPR011053 Single hybrid motif DY252_14915 ad02df7cab3aa4f358693b326f06c5da 145 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 101 118 - T 31-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DY252_14915 ad02df7cab3aa4f358693b326f06c5da 145 Gene3D G3DSA:2.40.50.100 68 145 3.0E-25 T 31-10-2018 DY252_16560 86cfa7a679304bc1e86dd2204ffae343 502 SUPERFAMILY SSF52540 12 180 5.32E-6 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_16560 86cfa7a679304bc1e86dd2204ffae343 502 Gene3D G3DSA:3.40.50.300 2 199 1.5E-15 T 31-10-2018 DY252_03005 d761ebbebe2aeefa91269d065d40f062 154 Pfam PF03061 Thioesterase superfamily 54 123 4.5E-9 T 31-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DY252_03005 d761ebbebe2aeefa91269d065d40f062 154 SUPERFAMILY SSF54637 5 144 7.1E-27 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_03005 d761ebbebe2aeefa91269d065d40f062 154 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 28 131 1.3E-16 T 31-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 DY252_03005 d761ebbebe2aeefa91269d065d40f062 154 Gene3D G3DSA:3.10.129.10 5 142 1.2E-32 T 31-10-2018 DY252_15360 0424dd7ee2c9bc99d3feb0a1557d97d9 118 Pfam PF10984 Protein of unknown function (DUF2794) 17 100 3.1E-22 T 31-10-2018 IPR021252 Protein of unknown function DUF2794 DY252_04140 f0d7c3a318355cadaa52f1be1d5b840c 311 Pfam PF01012 Electron transfer flavoprotein domain 4 170 3.8E-38 T 31-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DY252_04140 f0d7c3a318355cadaa52f1be1d5b840c 311 SUPERFAMILY SSF52402 2 184 2.01E-57 T 31-10-2018 DY252_04140 f0d7c3a318355cadaa52f1be1d5b840c 311 SMART SM00893 3 182 4.7E-52 T 31-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DY252_04140 f0d7c3a318355cadaa52f1be1d5b840c 311 Gene3D G3DSA:3.40.50.1220 184 311 1.2E-57 T 31-10-2018 DY252_04140 f0d7c3a318355cadaa52f1be1d5b840c 311 SUPERFAMILY SSF52467 189 308 6.0E-48 T 31-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DY252_04140 f0d7c3a318355cadaa52f1be1d5b840c 311 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 253 279 - T 31-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 DY252_04140 f0d7c3a318355cadaa52f1be1d5b840c 311 Gene3D G3DSA:3.40.50.620 2 183 6.3E-57 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_04140 f0d7c3a318355cadaa52f1be1d5b840c 311 PIRSF PIRSF000089 1 311 1.4E-106 T 31-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 DY252_04140 f0d7c3a318355cadaa52f1be1d5b840c 311 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 272 4.9E-36 T 31-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 DY252_18585 90fac27636122bd19539e120123fc3ee 87 Pfam PF13770 Domain of unknown function (DUF4169) 2 56 8.9E-19 T 31-10-2018 IPR025227 Protein of unknown function DUF4169 DY252_19865 e9c6b0acda41b4668c5cb91437438fa0 293 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 81 95 - T 31-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DY252_19865 e9c6b0acda41b4668c5cb91437438fa0 293 Gene3D G3DSA:3.10.310.10 18 283 2.9E-89 T 31-10-2018 DY252_19865 e9c6b0acda41b4668c5cb91437438fa0 293 SUPERFAMILY SSF54506 154 285 4.71E-49 T 31-10-2018 DY252_19865 e9c6b0acda41b4668c5cb91437438fa0 293 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 16 287 34.761 T 31-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DY252_19865 e9c6b0acda41b4668c5cb91437438fa0 293 SUPERFAMILY SSF54506 16 145 1.49E-39 T 31-10-2018 DY252_19865 e9c6b0acda41b4668c5cb91437438fa0 293 Gene3D G3DSA:3.10.310.10 130 274 2.9E-89 T 31-10-2018 DY252_19865 e9c6b0acda41b4668c5cb91437438fa0 293 Pfam PF01678 Diaminopimelate epimerase 166 277 1.1E-28 T 31-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DY252_19865 e9c6b0acda41b4668c5cb91437438fa0 293 Pfam PF01678 Diaminopimelate epimerase 18 137 7.1E-23 T 31-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DY252_19865 e9c6b0acda41b4668c5cb91437438fa0 293 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 17 286 1.9E-77 T 31-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DY252_15725 807ec8eb689de037871b6c2e7663812d 434 SUPERFAMILY SSF55073 232 418 2.04E-38 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_15725 807ec8eb689de037871b6c2e7663812d 434 Gene3D G3DSA:3.30.70.1230 227 424 1.0E-37 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_15725 807ec8eb689de037871b6c2e7663812d 434 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 239 410 1.3E-15 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_15725 807ec8eb689de037871b6c2e7663812d 434 SMART SM00044 203 409 3.1E-4 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_09590 f43827b96913f1a2d38afe2590d0696c 438 Pfam PF17408 Malonyl-CoA decarboxylase N-terminal domain 81 164 6.7E-27 T 31-10-2018 IPR035372 Malonyl-CoA decarboxylase, N-terminal KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 DY252_09590 f43827b96913f1a2d38afe2590d0696c 438 Gene3D G3DSA:1.20.140.90 25 163 3.3E-45 T 31-10-2018 IPR038351 Malonyl-CoA decarboxylase, N-terminal domain superfamily KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 DY252_09590 f43827b96913f1a2d38afe2590d0696c 438 Gene3D G3DSA:3.40.630.150 166 438 2.8E-112 T 31-10-2018 DY252_09590 f43827b96913f1a2d38afe2590d0696c 438 Pfam PF05292 Malonyl-CoA decarboxylase C-terminal domain 167 408 3.8E-104 T 31-10-2018 IPR007956 Malonyl-CoA decarboxylase, C-terminal GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 DY252_02485 c5d09f64c55cc45fcdf7bde92484814d 171 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 10 79 8.2E-28 T 31-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DY252_02485 c5d09f64c55cc45fcdf7bde92484814d 171 Gene3D G3DSA:3.10.20.80 5 78 1.6E-29 T 31-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DY252_02485 c5d09f64c55cc45fcdf7bde92484814d 171 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 171 27.59 T 31-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DY252_02485 c5d09f64c55cc45fcdf7bde92484814d 171 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 10 171 2.2E-65 T 31-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DY252_02485 c5d09f64c55cc45fcdf7bde92484814d 171 Gene3D G3DSA:3.30.110.10 79 171 2.7E-39 T 31-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 DY252_02485 c5d09f64c55cc45fcdf7bde92484814d 171 SUPERFAMILY SSF55200 85 170 4.71E-34 T 31-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 DY252_02485 c5d09f64c55cc45fcdf7bde92484814d 171 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 86 170 4.7E-38 T 31-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 DY252_02485 c5d09f64c55cc45fcdf7bde92484814d 171 SUPERFAMILY SSF54364 7 81 4.71E-26 T 31-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DY252_02485 c5d09f64c55cc45fcdf7bde92484814d 171 ProSitePatterns PS00938 Initiation factor 3 signature. 61 74 - T 31-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 DY252_07325 b1c2307b50bebff4a95f4dc2d6058103 591 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 10 590 8.1E-198 T 31-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 DY252_07325 b1c2307b50bebff4a95f4dc2d6058103 591 SUPERFAMILY SSF55486 8 576 1.59E-111 T 31-10-2018 DY252_07325 b1c2307b50bebff4a95f4dc2d6058103 591 Pfam PF08439 Oligopeptidase F 113 182 2.6E-18 T 31-10-2018 IPR013647 Oligopeptidase F, N-terminal domain DY252_07325 b1c2307b50bebff4a95f4dc2d6058103 591 Gene3D G3DSA:1.20.140.70 22 169 5.7E-18 T 31-10-2018 DY252_07325 b1c2307b50bebff4a95f4dc2d6058103 591 Gene3D G3DSA:1.10.1370.20 222 591 1.6E-119 T 31-10-2018 DY252_07325 b1c2307b50bebff4a95f4dc2d6058103 591 Pfam PF01432 Peptidase family M3 197 578 1.2E-37 T 31-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 DY252_03230 eb7fcab2164831b47ead3906780bf335 424 Gene3D G3DSA:3.40.50.2300 145 387 3.6E-136 T 31-10-2018 DY252_03230 eb7fcab2164831b47ead3906780bf335 424 Gene3D G3DSA:3.40.50.2300 32 368 3.6E-136 T 31-10-2018 DY252_03230 eb7fcab2164831b47ead3906780bf335 424 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 30 397 2.3E-178 T 31-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like DY252_03230 eb7fcab2164831b47ead3906780bf335 424 Pfam PF13433 Periplasmic binding protein domain 30 400 4.6E-175 T 31-10-2018 DY252_03230 eb7fcab2164831b47ead3906780bf335 424 SUPERFAMILY SSF53822 29 402 1.65E-89 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_01995 4362ea1378e21039d47d1594ee893351 943 Gene3D G3DSA:1.10.150.20 185 258 1.9E-99 T 31-10-2018 DY252_01995 4362ea1378e21039d47d1594ee893351 943 Gene3D G3DSA:1.20.1060.10 557 673 2.3E-41 T 31-10-2018 DY252_01995 4362ea1378e21039d47d1594ee893351 943 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 182 277 7.6E-32 T 31-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 DY252_01995 4362ea1378e21039d47d1594ee893351 943 ProSitePatterns PS00447 DNA polymerase family A signature. 769 788 - T 31-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DY252_01995 4362ea1378e21039d47d1594ee893351 943 Pfam PF00476 DNA polymerase family A 564 941 5.1E-152 T 31-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DY252_01995 4362ea1378e21039d47d1594ee893351 943 SUPERFAMILY SSF47807 182 296 3.44E-32 T 31-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily DY252_01995 4362ea1378e21039d47d1594ee893351 943 SMART SM00475 18 273 6.5E-129 T 31-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 DY252_01995 4362ea1378e21039d47d1594ee893351 943 SUPERFAMILY SSF56672 536 943 3.67E-154 T 31-10-2018 DY252_01995 4362ea1378e21039d47d1594ee893351 943 SUPERFAMILY SSF53098 324 532 1.77E-51 T 31-10-2018 IPR012337 Ribonuclease H-like superfamily DY252_01995 4362ea1378e21039d47d1594ee893351 943 Gene3D G3DSA:3.30.70.370 680 939 9.6E-108 T 31-10-2018 DY252_01995 4362ea1378e21039d47d1594ee893351 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 745 758 3.1E-74 T 31-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DY252_01995 4362ea1378e21039d47d1594ee893351 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 806 817 3.1E-74 T 31-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DY252_01995 4362ea1378e21039d47d1594ee893351 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 828 839 3.1E-74 T 31-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DY252_01995 4362ea1378e21039d47d1594ee893351 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 769 794 3.1E-74 T 31-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DY252_01995 4362ea1378e21039d47d1594ee893351 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 890 903 3.1E-74 T 31-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DY252_01995 4362ea1378e21039d47d1594ee893351 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 670 692 3.1E-74 T 31-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DY252_01995 4362ea1378e21039d47d1594ee893351 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 693 708 3.1E-74 T 31-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DY252_01995 4362ea1378e21039d47d1594ee893351 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 860 876 3.1E-74 T 31-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DY252_01995 4362ea1378e21039d47d1594ee893351 943 PRINTS PR00868 DNA-polymerase family A (pol I) signature 715 738 3.1E-74 T 31-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DY252_01995 4362ea1378e21039d47d1594ee893351 943 Gene3D G3DSA:3.30.420.10 323 555 1.3E-68 T 31-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DY252_01995 4362ea1378e21039d47d1594ee893351 943 TIGRFAM TIGR00593 pola: DNA polymerase I 20 943 1.2E-295 T 31-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DY252_01995 4362ea1378e21039d47d1594ee893351 943 SMART SM00474 326 532 5.1E-39 T 31-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DY252_01995 4362ea1378e21039d47d1594ee893351 943 SUPERFAMILY SSF88723 14 181 6.87E-57 T 31-10-2018 IPR029060 PIN-like domain superfamily DY252_01995 4362ea1378e21039d47d1594ee893351 943 Gene3D G3DSA:1.10.150.20 724 867 9.6E-108 T 31-10-2018 DY252_01995 4362ea1378e21039d47d1594ee893351 943 SMART SM00279 184 219 4.1E-14 T 31-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 DY252_01995 4362ea1378e21039d47d1594ee893351 943 Pfam PF01612 3'-5' exonuclease 326 531 5.4E-38 T 31-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DY252_01995 4362ea1378e21039d47d1594ee893351 943 SMART SM00482 701 907 8.0E-115 T 31-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DY252_01995 4362ea1378e21039d47d1594ee893351 943 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 20 181 1.3E-59 T 31-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 DY252_01995 4362ea1378e21039d47d1594ee893351 943 Gene3D G3DSA:3.40.50.1010 20 288 1.9E-99 T 31-10-2018 DY252_20575 dc4390907fc5c69ba7d2f0fda2c17163 215 TIGRFAM TIGR03308 phn_thr-fam: phosphonate metabolim protein, transferase hexapeptide repeat family 13 212 3.2E-86 T 31-10-2018 IPR017694 Phosphonate metabolism protein, transferase hexapeptide repeat family DY252_20575 dc4390907fc5c69ba7d2f0fda2c17163 215 SUPERFAMILY SSF51161 21 208 2.08E-34 T 31-10-2018 IPR011004 Trimeric LpxA-like superfamily DY252_20575 dc4390907fc5c69ba7d2f0fda2c17163 215 Gene3D G3DSA:2.160.10.10 34 205 3.5E-43 T 31-10-2018 DY252_20575 dc4390907fc5c69ba7d2f0fda2c17163 215 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 152 1.0E-5 T 31-10-2018 IPR001451 Hexapeptide repeat DY252_20575 dc4390907fc5c69ba7d2f0fda2c17163 215 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 31-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 Gene3D G3DSA:1.10.150.20 359 426 9.1E-23 T 31-10-2018 DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 SUPERFAMILY SSF54814 206 284 5.56E-31 T 31-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 Gene3D G3DSA:3.30.300.20 205 283 2.0E-34 T 31-10-2018 IPR015946 K homology domain-like, alpha/beta DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 SUPERFAMILY SSF50249 138 205 7.17E-18 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 9 416 30.792 T 31-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 SMART SM00322 307 371 1.9E-6 T 31-10-2018 IPR004087 K Homology domain GO:0003676 DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 SMART SM00322 236 299 8.8 T 31-10-2018 IPR004087 K Homology domain GO:0003676 DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 371 419 2.7E-20 T 31-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 SMART SM00316 140 206 4.7E-9 T 31-10-2018 IPR022967 RNA-binding domain, S1 DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 SUPERFAMILY SSF54814 285 348 7.19E-18 T 31-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 SUPERFAMILY SSF47794 355 420 2.83E-15 T 31-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 Pfam PF13184 NusA-like KH domain 236 303 3.1E-29 T 31-10-2018 IPR025249 KH domain, NusA-like GO:0003723 DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 SUPERFAMILY SSF47794 435 498 6.75E-6 T 31-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 Gene3D G3DSA:2.40.50.140 143 204 2.4E-22 T 31-10-2018 DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 11 348 2.6E-131 T 31-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 Gene3D G3DSA:1.10.150.20 437 498 6.8E-9 T 31-10-2018 DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 Pfam PF08529 NusA N-terminal domain 11 131 1.2E-35 T 31-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 Gene3D G3DSA:3.30.1480.10 9 134 5.3E-41 T 31-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 Gene3D G3DSA:3.30.300.20 284 352 5.2E-30 T 31-10-2018 IPR015946 K homology domain-like, alpha/beta DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 Pfam PF00575 S1 RNA binding domain 138 200 7.3E-8 T 31-10-2018 IPR003029 S1 domain GO:0003676 DY252_01075 e19fcefccef32d44f23d717a35cb2a39 518 SUPERFAMILY SSF69705 10 132 1.19E-39 T 31-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 DY252_17275 dd06e97b62c80a8ccef085782f1ce73f 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 228 270 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_17275 dd06e97b62c80a8ccef085782f1ce73f 279 Gene3D G3DSA:1.10.10.60 170 278 4.8E-27 T 31-10-2018 DY252_17275 dd06e97b62c80a8ccef085782f1ce73f 279 SUPERFAMILY SSF46689 228 276 5.82E-11 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_17275 dd06e97b62c80a8ccef085782f1ce73f 279 Pfam PF12833 Helix-turn-helix domain 197 276 1.5E-23 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_17275 dd06e97b62c80a8ccef085782f1ce73f 279 SMART SM00342 191 274 3.1E-28 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 216 229 - T 31-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 Gene3D G3DSA:2.60.34.10 396 535 1.6E-46 T 31-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 631 38.435 T 31-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 SUPERFAMILY SSF53067 212 394 8.3E-49 T 31-10-2018 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 Pfam PF00012 Hsp70 protein 23 614 9.1E-179 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 Gene3D G3DSA:3.30.420.40 205 379 9.7E-114 T 31-10-2018 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 Gene3D G3DSA:1.20.1270.10 536 630 1.4E-24 T 31-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 Gene3D G3DSA:3.30.420.40 24 392 9.7E-114 T 31-10-2018 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 SUPERFAMILY SSF100934 520 630 3.92E-30 T 31-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 Gene3D G3DSA:3.90.640.10 249 329 9.7E-114 T 31-10-2018 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 SUPERFAMILY SSF53067 22 207 4.02E-52 T 31-10-2018 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 350 364 - T 31-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 PRINTS PR00301 70kDa heat shock protein signature 400 419 6.1E-54 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 PRINTS PR00301 70kDa heat shock protein signature 481 497 6.1E-54 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 PRINTS PR00301 70kDa heat shock protein signature 163 183 6.1E-54 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 PRINTS PR00301 70kDa heat shock protein signature 222 232 6.1E-54 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 PRINTS PR00301 70kDa heat shock protein signature 378 398 6.1E-54 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 PRINTS PR00301 70kDa heat shock protein signature 347 363 6.1E-54 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 PRINTS PR00301 70kDa heat shock protein signature 22 35 6.1E-54 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 PRINTS PR00301 70kDa heat shock protein signature 51 63 6.1E-54 T 31-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 SUPERFAMILY SSF100920 398 550 9.68E-47 T 31-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 23 630 6.0E-254 T 31-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 DY252_14745 1da18a5a6aecc5aa82405ac4e24e45da 632 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 26 33 - T 31-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DY252_12395 1d7837e57d3fb14576456e153a698708 112 Pfam PF03831 PhnA domain 43 110 2.0E-33 T 31-10-2018 IPR013988 PhnA protein, C-terminal DY252_12395 1d7837e57d3fb14576456e153a698708 112 SUPERFAMILY SSF82057 39 110 2.47E-28 T 31-10-2018 DY252_12395 1d7837e57d3fb14576456e153a698708 112 SUPERFAMILY SSF57783 3 35 1.39E-13 T 31-10-2018 DY252_12395 1d7837e57d3fb14576456e153a698708 112 Gene3D G3DSA:2.20.25.10 1 40 5.9E-19 T 31-10-2018 DY252_12395 1d7837e57d3fb14576456e153a698708 112 Pfam PF08274 PhnA Zinc-Ribbon 3 32 1.5E-14 T 31-10-2018 IPR013987 PhnA protein, N-terminal DY252_12395 1d7837e57d3fb14576456e153a698708 112 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 109 9.9E-45 T 31-10-2018 IPR004624 PhnA protein DY252_12395 1d7837e57d3fb14576456e153a698708 112 Gene3D G3DSA:2.30.30.40 41 111 5.7E-35 T 31-10-2018 DY252_18295 5b4d3f3a7e1edbab7a2f54c621115e2f 305 SUPERFAMILY SSF46689 187 238 3.89E-13 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_18295 5b4d3f3a7e1edbab7a2f54c621115e2f 305 Pfam PF06719 AraC-type transcriptional regulator N-terminus 25 175 3.9E-43 T 31-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal DY252_18295 5b4d3f3a7e1edbab7a2f54c621115e2f 305 Pfam PF12833 Helix-turn-helix domain 210 283 2.8E-18 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_18295 5b4d3f3a7e1edbab7a2f54c621115e2f 305 Gene3D G3DSA:1.10.10.60 184 288 5.8E-26 T 31-10-2018 DY252_18295 5b4d3f3a7e1edbab7a2f54c621115e2f 305 SMART SM00342 204 287 1.3E-19 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_18295 5b4d3f3a7e1edbab7a2f54c621115e2f 305 SUPERFAMILY SSF46689 240 284 1.08E-5 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_00850 f0832971af08ba6d85ad20ead0c56165 346 Gene3D G3DSA:3.30.1220.10 232 346 2.1E-21 T 31-10-2018 IPR036627 CobW-like, C-terminal domain superfamily DY252_00850 f0832971af08ba6d85ad20ead0c56165 346 SUPERFAMILY SSF90002 254 345 3.66E-20 T 31-10-2018 DY252_00850 f0832971af08ba6d85ad20ead0c56165 346 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 254 345 4.3E-18 T 31-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DY252_00850 f0832971af08ba6d85ad20ead0c56165 346 Gene3D G3DSA:3.40.50.300 5 230 3.8E-59 T 31-10-2018 DY252_00850 f0832971af08ba6d85ad20ead0c56165 346 TIGRFAM TIGR02475 CobW: cobalamin biosynthesis protein CobW 6 342 1.1E-160 T 31-10-2018 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 DY252_00850 f0832971af08ba6d85ad20ead0c56165 346 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 202 9.0E-55 T 31-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DY252_00850 f0832971af08ba6d85ad20ead0c56165 346 SUPERFAMILY SSF52540 6 249 1.05E-29 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_06235 e454b27bdb7e3070a704209865fbfbe9 997 SUPERFAMILY SSF101790 899 994 2.62E-18 T 31-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DY252_06235 e454b27bdb7e3070a704209865fbfbe9 997 Gene3D G3DSA:3.50.50.60 293 418 1.7E-96 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_06235 e454b27bdb7e3070a704209865fbfbe9 997 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 191 3.1E-8 T 31-10-2018 DY252_06235 e454b27bdb7e3070a704209865fbfbe9 997 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 281 299 3.1E-8 T 31-10-2018 DY252_06235 e454b27bdb7e3070a704209865fbfbe9 997 Gene3D G3DSA:3.10.20.440 11 107 4.5E-10 T 31-10-2018 DY252_06235 e454b27bdb7e3070a704209865fbfbe9 997 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 16 101 6.8E-27 T 31-10-2018 DY252_06235 e454b27bdb7e3070a704209865fbfbe9 997 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 171 440 9.9E-14 T 31-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DY252_06235 e454b27bdb7e3070a704209865fbfbe9 997 Gene3D G3DSA:3.30.1360.120 601 987 6.6E-94 T 31-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DY252_06235 e454b27bdb7e3070a704209865fbfbe9 997 TIGRFAM TIGR01372 soxA: sarcosine oxidase, alpha subunit family 4 996 0.0 T 31-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DY252_06235 e454b27bdb7e3070a704209865fbfbe9 997 SUPERFAMILY SSF103025 609 895 1.88E-90 T 31-10-2018 DY252_06235 e454b27bdb7e3070a704209865fbfbe9 997 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 886 983 1.5E-14 T 31-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DY252_06235 e454b27bdb7e3070a704209865fbfbe9 997 SUPERFAMILY SSF51905 169 587 4.32E-32 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_06235 e454b27bdb7e3070a704209865fbfbe9 997 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 171 193 1.5E-8 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_06235 e454b27bdb7e3070a704209865fbfbe9 997 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 282 290 1.5E-8 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_06235 e454b27bdb7e3070a704209865fbfbe9 997 Gene3D G3DSA:1.10.10.1100 503 581 1.7E-96 T 31-10-2018 DY252_06235 e454b27bdb7e3070a704209865fbfbe9 997 Gene3D G3DSA:3.50.50.60 171 588 1.7E-96 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_06235 e454b27bdb7e3070a704209865fbfbe9 997 PIRSF PIRSF037980 1 997 0.0 T 31-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DY252_06235 e454b27bdb7e3070a704209865fbfbe9 997 Pfam PF01571 Aminomethyltransferase folate-binding domain 615 879 1.9E-70 T 31-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain DY252_17025 39695d7f6777290e30e89b698b6b0a8a 260 Pfam PF04055 Radical SAM superfamily 42 130 1.7E-7 T 31-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DY252_17025 39695d7f6777290e30e89b698b6b0a8a 260 PIRSF PIRSF000370 16 260 1.6E-53 T 31-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DY252_17025 39695d7f6777290e30e89b698b6b0a8a 260 Gene3D G3DSA:3.20.20.70 18 191 2.3E-29 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_17025 39695d7f6777290e30e89b698b6b0a8a 260 SUPERFAMILY SSF102114 41 143 1.57E-9 T 31-10-2018 DY252_17025 39695d7f6777290e30e89b698b6b0a8a 260 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 18 257 36.383 T 31-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DY252_17025 39695d7f6777290e30e89b698b6b0a8a 260 Pfam PF13394 4Fe-4S single cluster domain 40 126 4.9E-7 T 31-10-2018 DY252_17025 39695d7f6777290e30e89b698b6b0a8a 260 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 17 260 2.4E-89 T 31-10-2018 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DY252_08605 d60e0632ab7fec91fb461b60f86b9cfe 282 Gene3D G3DSA:3.40.190.10 130 224 8.3E-57 T 31-10-2018 DY252_08605 d60e0632ab7fec91fb461b60f86b9cfe 282 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 251 3.4E-43 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_08605 d60e0632ab7fec91fb461b60f86b9cfe 282 Gene3D G3DSA:3.40.190.10 32 248 8.3E-57 T 31-10-2018 DY252_08605 d60e0632ab7fec91fb461b60f86b9cfe 282 SMART SM00062 40 269 1.9E-47 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_08605 d60e0632ab7fec91fb461b60f86b9cfe 282 SUPERFAMILY SSF53850 11 268 1.09E-51 T 31-10-2018 DY252_08605 d60e0632ab7fec91fb461b60f86b9cfe 282 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 63 76 - T 31-10-2018 IPR018313 Solute-binding protein family 3, conserved site DY252_10840 656bd2a96ee305f4299233e2cf79a9af 407 Pfam PF08484 C-methyltransferase C-terminal domain 245 402 1.2E-60 T 31-10-2018 IPR013691 C-methyltransferase DY252_10840 656bd2a96ee305f4299233e2cf79a9af 407 SUPERFAMILY SSF53335 62 252 9.18E-19 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_10840 656bd2a96ee305f4299233e2cf79a9af 407 Gene3D G3DSA:2.20.25.520 1 54 1.4E-13 T 31-10-2018 IPR038576 Methyltransferase putative zinc binding domain superfamily DY252_10840 656bd2a96ee305f4299233e2cf79a9af 407 Pfam PF13489 Methyltransferase domain 84 238 2.6E-12 T 31-10-2018 DY252_10840 656bd2a96ee305f4299233e2cf79a9af 407 Pfam PF08421 Putative zinc binding domain 3 64 8.9E-18 T 31-10-2018 IPR013630 Methyltransferase putative zinc binding domain DY252_10840 656bd2a96ee305f4299233e2cf79a9af 407 Gene3D G3DSA:3.40.50.720 309 407 8.9E-36 T 31-10-2018 DY252_10840 656bd2a96ee305f4299233e2cf79a9af 407 Gene3D G3DSA:3.40.50.150 56 255 5.1E-38 T 31-10-2018 DY252_15420 725f5144435309ca2f24203828ae0f36 117 Gene3D G3DSA:1.10.620.20 30 116 8.9E-8 T 31-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 DY252_15420 725f5144435309ca2f24203828ae0f36 117 SMART SM00746 62 99 3.5E-6 T 31-10-2018 IPR011017 TRASH domain DY252_15420 725f5144435309ca2f24203828ae0f36 117 SUPERFAMILY SSF47240 45 104 2.43E-6 T 31-10-2018 IPR009078 Ferritin-like superfamily DY252_15420 725f5144435309ca2f24203828ae0f36 117 Pfam PF04945 YHS domain 61 104 1.1E-12 T 31-10-2018 IPR007029 YHS domain DY252_21670 d85b56acee452e9ceb8089b38ecbedfc 541 Gene3D G3DSA:2.170.8.10 43 335 3.4E-228 T 31-10-2018 DY252_21670 d85b56acee452e9ceb8089b38ecbedfc 541 PIRSF PIRSF006294 8 533 1.5E-235 T 31-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DY252_21670 d85b56acee452e9ceb8089b38ecbedfc 541 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 254 269 - T 31-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DY252_21670 d85b56acee452e9ceb8089b38ecbedfc 541 SUPERFAMILY SSF53795 217 530 2.14E-132 T 31-10-2018 DY252_21670 d85b56acee452e9ceb8089b38ecbedfc 541 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 17 533 54.795 T 31-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DY252_21670 d85b56acee452e9ceb8089b38ecbedfc 541 SUPERFAMILY SSF68923 10 216 7.32E-86 T 31-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DY252_21670 d85b56acee452e9ceb8089b38ecbedfc 541 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 13 527 1.8E-216 T 31-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DY252_21670 d85b56acee452e9ceb8089b38ecbedfc 541 Gene3D G3DSA:3.90.228.20 218 518 3.4E-228 T 31-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DY252_21670 d85b56acee452e9ceb8089b38ecbedfc 541 Gene3D G3DSA:3.40.449.10 33 217 3.4E-228 T 31-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DY252_21670 d85b56acee452e9ceb8089b38ecbedfc 541 Pfam PF01293 Phosphoenolpyruvate carboxykinase 23 485 4.1E-222 T 31-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DY252_09825 d04969d333e238c28bceafe5ef4a4eed 449 Gene3D G3DSA:1.10.8.60 317 379 6.1E-19 T 31-10-2018 DY252_09825 d04969d333e238c28bceafe5ef4a4eed 449 SUPERFAMILY SSF46689 357 440 6.72E-10 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_09825 d04969d333e238c28bceafe5ef4a4eed 449 Pfam PF00158 Sigma-54 interaction domain 148 312 3.0E-66 T 31-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DY252_09825 d04969d333e238c28bceafe5ef4a4eed 449 Pfam PF02954 Bacterial regulatory protein, Fis family 398 438 4.9E-10 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_09825 d04969d333e238c28bceafe5ef4a4eed 449 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 31-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DY252_09825 d04969d333e238c28bceafe5ef4a4eed 449 SMART SM00448 6 117 6.7E-29 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_09825 d04969d333e238c28bceafe5ef4a4eed 449 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 421 441 6.3E-5 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_09825 d04969d333e238c28bceafe5ef4a4eed 449 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 404 421 6.3E-5 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_09825 d04969d333e238c28bceafe5ef4a4eed 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 31-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DY252_09825 d04969d333e238c28bceafe5ef4a4eed 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 31-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DY252_09825 d04969d333e238c28bceafe5ef4a4eed 449 Gene3D G3DSA:3.40.50.2300 3 137 2.3E-35 T 31-10-2018 DY252_09825 d04969d333e238c28bceafe5ef4a4eed 449 SUPERFAMILY SSF52172 8 192 1.21E-41 T 31-10-2018 IPR011006 CheY-like superfamily DY252_09825 d04969d333e238c28bceafe5ef4a4eed 449 Pfam PF00072 Response regulator receiver domain 8 114 9.0E-29 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_09825 d04969d333e238c28bceafe5ef4a4eed 449 SMART SM00382 167 309 2.3E-12 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_09825 d04969d333e238c28bceafe5ef4a4eed 449 Gene3D G3DSA:3.40.50.300 138 316 3.7E-61 T 31-10-2018 DY252_09825 d04969d333e238c28bceafe5ef4a4eed 449 SUPERFAMILY SSF52540 146 374 3.61E-64 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_09825 d04969d333e238c28bceafe5ef4a4eed 449 Gene3D G3DSA:1.10.10.60 391 441 1.4E-13 T 31-10-2018 DY252_14515 132f22af6af5450ee12c721e543917fb 116 SUPERFAMILY SSF52821 3 108 4.71E-24 T 31-10-2018 IPR036873 Rhodanese-like domain superfamily DY252_14515 132f22af6af5450ee12c721e543917fb 116 SMART SM00450 5 105 2.0E-9 T 31-10-2018 IPR001763 Rhodanese-like domain DY252_14515 132f22af6af5450ee12c721e543917fb 116 Gene3D G3DSA:3.40.250.10 2 109 6.0E-22 T 31-10-2018 IPR036873 Rhodanese-like domain superfamily DY252_14515 132f22af6af5450ee12c721e543917fb 116 ProSitePatterns PS00380 Rhodanese signature 1. 31 42 - T 31-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 DY252_14515 132f22af6af5450ee12c721e543917fb 116 Pfam PF00581 Rhodanese-like domain 7 101 5.8E-12 T 31-10-2018 IPR001763 Rhodanese-like domain DY252_17415 7c1402def5ca7144768ba2a1b7cd2d38 299 SUPERFAMILY SSF103481 41 138 4.97E-9 T 31-10-2018 DY252_17415 7c1402def5ca7144768ba2a1b7cd2d38 299 SUPERFAMILY SSF103481 191 282 6.15E-12 T 31-10-2018 DY252_17415 7c1402def5ca7144768ba2a1b7cd2d38 299 Pfam PF00892 EamA-like transporter family 149 282 5.1E-16 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_17415 7c1402def5ca7144768ba2a1b7cd2d38 299 Pfam PF00892 EamA-like transporter family 10 136 1.3E-8 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_08635 8c7286197edad237d2f6dceb2ceae422 379 Pfam PF07433 Protein of unknown function (DUF1513) 67 376 2.0E-102 T 31-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 DY252_08635 8c7286197edad237d2f6dceb2ceae422 379 Gene3D G3DSA:2.130.10.10 17 350 5.9E-10 T 31-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DY252_08635 8c7286197edad237d2f6dceb2ceae422 379 PIRSF PIRSF028101 1 378 9.5E-98 T 31-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 DY252_08635 8c7286197edad237d2f6dceb2ceae422 379 SUPERFAMILY SSF69322 35 323 6.15E-19 T 31-10-2018 DY252_11970 6c947ace3d1ac7332d31209d94ce3a2c 106 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 46 66 - T 31-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 DY252_11970 6c947ace3d1ac7332d31209d94ce3a2c 106 SUPERFAMILY SSF54534 2 105 2.49E-32 T 31-10-2018 DY252_11970 6c947ace3d1ac7332d31209d94ce3a2c 106 Pfam PF13616 PPIC-type PPIASE domain 2 103 6.9E-28 T 31-10-2018 DY252_11970 6c947ace3d1ac7332d31209d94ce3a2c 106 Gene3D G3DSA:3.10.50.40 1 106 3.0E-39 T 31-10-2018 DY252_21865 a0f734e17e46ada30d8c7375a79f337c 134 Gene3D G3DSA:3.40.50.510 1 134 2.7E-41 T 31-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DY252_21865 a0f734e17e46ada30d8c7375a79f337c 134 SUPERFAMILY SSF53062 1 125 1.7E-38 T 31-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DY252_21865 a0f734e17e46ada30d8c7375a79f337c 134 Pfam PF03610 PTS system fructose IIA component 3 115 3.8E-31 T 31-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DY252_21855 a7a42f665b5e32553e1d056b6b9ca14c 598 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 22 584 2.9E-154 T 31-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 DY252_21855 a7a42f665b5e32553e1d056b6b9ca14c 598 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 473 488 1.0E-24 T 31-10-2018 DY252_21855 a7a42f665b5e32553e1d056b6b9ca14c 598 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 316 335 1.0E-24 T 31-10-2018 DY252_21855 a7a42f665b5e32553e1d056b6b9ca14c 598 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 490 505 1.0E-24 T 31-10-2018 DY252_21855 a7a42f665b5e32553e1d056b6b9ca14c 598 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 526 538 1.0E-24 T 31-10-2018 DY252_21855 a7a42f665b5e32553e1d056b6b9ca14c 598 SUPERFAMILY SSF51621 272 568 3.4E-98 T 31-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DY252_21855 a7a42f665b5e32553e1d056b6b9ca14c 598 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 274 567 5.3E-100 T 31-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 DY252_21855 a7a42f665b5e32553e1d056b6b9ca14c 598 SUPERFAMILY SSF47831 46 166 1.29E-24 T 31-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 DY252_21855 a7a42f665b5e32553e1d056b6b9ca14c 598 SUPERFAMILY SSF52009 149 268 4.45E-31 T 31-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 DY252_21855 a7a42f665b5e32553e1d056b6b9ca14c 598 Gene3D G3DSA:3.50.30.10 24 256 2.1E-69 T 31-10-2018 DY252_21855 a7a42f665b5e32553e1d056b6b9ca14c 598 Pfam PF05524 PEP-utilising enzyme, N-terminal 23 149 1.4E-24 T 31-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 DY252_21855 a7a42f665b5e32553e1d056b6b9ca14c 598 Gene3D G3DSA:1.10.274.10 41 169 2.1E-69 T 31-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 DY252_21855 a7a42f665b5e32553e1d056b6b9ca14c 598 Gene3D G3DSA:3.20.20.60 257 596 2.4E-111 T 31-10-2018 DY252_21855 a7a42f665b5e32553e1d056b6b9ca14c 598 Pfam PF00391 PEP-utilising enzyme, mobile domain 175 248 3.9E-20 T 31-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DY252_21855 a7a42f665b5e32553e1d056b6b9ca14c 598 PIRSF PIRSF000732 18 596 1.4E-190 T 31-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 DY252_21855 a7a42f665b5e32553e1d056b6b9ca14c 598 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 473 491 - T 31-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 DY252_16095 32ce020354fa9f078f658702fa481571 483 SUPERFAMILY SSF51338 346 456 4.73E-37 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_16095 32ce020354fa9f078f658702fa481571 483 Gene3D G3DSA:2.30.40.10 4 454 1.6E-195 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_16095 32ce020354fa9f078f658702fa481571 483 Pfam PF01979 Amidohydrolase family 47 433 1.4E-28 T 31-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DY252_16095 32ce020354fa9f078f658702fa481571 483 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 4 452 5.9E-184 T 31-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 DY252_16095 32ce020354fa9f078f658702fa481571 483 SUPERFAMILY SSF51556 51 380 2.33E-112 T 31-10-2018 IPR032466 Metal-dependent hydrolase DY252_16095 32ce020354fa9f078f658702fa481571 483 Gene3D G3DSA:3.20.20.140 51 421 1.6E-195 T 31-10-2018 DY252_16095 32ce020354fa9f078f658702fa481571 483 SUPERFAMILY SSF51338 1 68 2.1E-18 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_07420 f949b8009e39ad36b2bb3d97fc17f835 154 Pfam PF09523 Protein of unknown function (DUF2390) 6 108 2.9E-29 T 31-10-2018 IPR012659 Conserved hypothetical protein CHP02444 DY252_07420 f949b8009e39ad36b2bb3d97fc17f835 154 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 4 110 1.3E-22 T 31-10-2018 IPR012659 Conserved hypothetical protein CHP02444 DY252_12165 6d1197c33462388b399794c8c354b6dc 333 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 12 235 2.1E-63 T 31-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DY252_12165 6d1197c33462388b399794c8c354b6dc 333 Pfam PF00902 Sec-independent protein translocase protein (TatC) 14 230 2.7E-65 T 31-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DY252_12165 6d1197c33462388b399794c8c354b6dc 333 ProSitePatterns PS01218 TatC family signature. 163 182 - T 31-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site DY252_12165 6d1197c33462388b399794c8c354b6dc 333 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 11 38 2.1E-40 T 31-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DY252_12165 6d1197c33462388b399794c8c354b6dc 333 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 163 191 2.1E-40 T 31-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DY252_12165 6d1197c33462388b399794c8c354b6dc 333 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 88 106 2.1E-40 T 31-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DY252_12165 6d1197c33462388b399794c8c354b6dc 333 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 106 132 2.1E-40 T 31-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DY252_12165 6d1197c33462388b399794c8c354b6dc 333 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 7 247 16.487 T 31-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DY252_15265 dfef4229dde99ed91766d4cf534725ed 204 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 1.2E-20 T 31-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_15265 dfef4229dde99ed91766d4cf534725ed 204 Gene3D G3DSA:3.10.430.100 60 148 1.4E-23 T 31-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DY252_15265 dfef4229dde99ed91766d4cf534725ed 204 SUPERFAMILY SSF55653 57 147 5.49E-24 T 31-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DY252_15265 dfef4229dde99ed91766d4cf534725ed 204 Gene3D G3DSA:3.40.5.10 1 50 9.0E-22 T 31-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_15265 dfef4229dde99ed91766d4cf534725ed 204 SUPERFAMILY SSF55658 1 56 6.1E-18 T 31-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal DY252_15265 dfef4229dde99ed91766d4cf534725ed 204 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 4.6E-38 T 31-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_15265 dfef4229dde99ed91766d4cf534725ed 204 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 24.151 T 31-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_15265 dfef4229dde99ed91766d4cf534725ed 204 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 145 1.9E-23 T 31-10-2018 IPR020069 Ribosomal protein L9, C-terminal DY252_09525 e8d769cda183f7cbe1545abf5d8cae83 595 SUPERFAMILY SSF55261 296 422 8.18E-34 T 31-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 DY252_09525 e8d769cda183f7cbe1545abf5d8cae83 595 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 560 2.4E-92 T 31-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_09525 e8d769cda183f7cbe1545abf5d8cae83 595 Pfam PF02938 GAD domain 315 406 1.0E-14 T 31-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 DY252_09525 e8d769cda183f7cbe1545abf5d8cae83 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 2.2E-21 T 31-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_09525 e8d769cda183f7cbe1545abf5d8cae83 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 2.2E-21 T 31-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_09525 e8d769cda183f7cbe1545abf5d8cae83 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 2.2E-21 T 31-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_09525 e8d769cda183f7cbe1545abf5d8cae83 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 2.2E-21 T 31-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_09525 e8d769cda183f7cbe1545abf5d8cae83 595 SUPERFAMILY SSF55681 114 586 6.64E-97 T 31-10-2018 DY252_09525 e8d769cda183f7cbe1545abf5d8cae83 595 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 4 587 30.307 T 31-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 DY252_09525 e8d769cda183f7cbe1545abf5d8cae83 595 Gene3D G3DSA:3.30.930.10 121 585 7.6E-169 T 31-10-2018 DY252_09525 e8d769cda183f7cbe1545abf5d8cae83 595 Pfam PF01336 OB-fold nucleic acid binding domain 21 103 9.2E-14 T 31-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DY252_09525 e8d769cda183f7cbe1545abf5d8cae83 595 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 5 585 1.6E-187 T 31-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 DY252_09525 e8d769cda183f7cbe1545abf5d8cae83 595 Gene3D G3DSA:3.30.1360.30 279 423 7.6E-169 T 31-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 DY252_09525 e8d769cda183f7cbe1545abf5d8cae83 595 SUPERFAMILY SSF50249 4 107 7.1E-29 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_09525 e8d769cda183f7cbe1545abf5d8cae83 595 Gene3D G3DSA:2.40.50.140 1 106 2.7E-32 T 31-10-2018 DY252_06490 8aaeeb13a83f8cbbbfd52f4af82fb351 486 Gene3D G3DSA:3.90.190.20 339 485 4.0E-52 T 31-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DY252_06490 8aaeeb13a83f8cbbbfd52f4af82fb351 486 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 482 32.52 T 31-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DY252_06490 8aaeeb13a83f8cbbbfd52f4af82fb351 486 Pfam PF08245 Mur ligase middle domain 109 311 1.1E-50 T 31-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DY252_06490 8aaeeb13a83f8cbbbfd52f4af82fb351 486 SUPERFAMILY SSF53244 332 483 5.36E-44 T 31-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DY252_06490 8aaeeb13a83f8cbbbfd52f4af82fb351 486 SUPERFAMILY SSF63418 17 100 6.15E-21 T 31-10-2018 IPR035911 MurE/MurF, N-terminal DY252_06490 8aaeeb13a83f8cbbbfd52f4af82fb351 486 Gene3D G3DSA:3.40.1190.10 102 336 3.7E-72 T 31-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DY252_06490 8aaeeb13a83f8cbbbfd52f4af82fb351 486 SUPERFAMILY SSF53623 102 331 1.26E-70 T 31-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DY252_06490 8aaeeb13a83f8cbbbfd52f4af82fb351 486 Gene3D G3DSA:3.40.1390.10 2 101 2.6E-23 T 31-10-2018 DY252_06490 8aaeeb13a83f8cbbbfd52f4af82fb351 486 Pfam PF01225 Mur ligase family, catalytic domain 24 99 3.6E-13 T 31-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DY252_06490 8aaeeb13a83f8cbbbfd52f4af82fb351 486 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 482 5.7E-144 T 31-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DY252_06490 8aaeeb13a83f8cbbbfd52f4af82fb351 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 332 416 1.1E-20 T 31-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DY252_15230 e8d482a2e37d81df5e608d6cdc4a1a63 419 Gene3D G3DSA:3.40.47.10 263 408 7.6E-55 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_15230 e8d482a2e37d81df5e608d6cdc4a1a63 419 SUPERFAMILY SSF53901 221 418 2.37E-72 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_15230 e8d482a2e37d81df5e608d6cdc4a1a63 419 Gene3D G3DSA:3.40.47.10 1 261 8.3E-87 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_15230 e8d482a2e37d81df5e608d6cdc4a1a63 419 PIRSF PIRSF000447 1 419 3.6E-185 T 31-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 DY252_15230 e8d482a2e37d81df5e608d6cdc4a1a63 419 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 261 375 1.7E-40 T 31-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DY252_15230 e8d482a2e37d81df5e608d6cdc4a1a63 419 SMART SM00825 Beta-ketoacyl synthase 4 419 1.9E-15 T 31-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DY252_15230 e8d482a2e37d81df5e608d6cdc4a1a63 419 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 160 176 - T 31-10-2018 IPR018201 Beta-ketoacyl synthase, active site DY252_15230 e8d482a2e37d81df5e608d6cdc4a1a63 419 SUPERFAMILY SSF53901 1 260 2.45E-74 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_15230 e8d482a2e37d81df5e608d6cdc4a1a63 419 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 253 3.2E-62 T 31-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DY252_15230 e8d482a2e37d81df5e608d6cdc4a1a63 419 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 417 1.9E-192 T 31-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 DY252_00980 7bf234c51f25f7c0c1ff4a0dc63437a3 783 Gene3D G3DSA:3.40.50.1820 532 768 7.7E-44 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_00980 7bf234c51f25f7c0c1ff4a0dc63437a3 783 SUPERFAMILY SSF53474 495 765 2.89E-29 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_00980 7bf234c51f25f7c0c1ff4a0dc63437a3 783 Pfam PF12146 Serine aminopeptidase, S33 535 753 1.4E-20 T 31-10-2018 IPR022742 Serine aminopeptidase, S33 DY252_06905 90e656a47e8d340a01260e0a80d68d0c 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 31-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 DY252_06905 90e656a47e8d340a01260e0a80d68d0c 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 6 428 42.428 T 31-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DY252_06905 90e656a47e8d340a01260e0a80d68d0c 431 Pfam PF00815 Histidinol dehydrogenase 24 427 1.6E-172 T 31-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DY252_06905 90e656a47e8d340a01260e0a80d68d0c 431 PIRSF PIRSF000099 5 431 2.6E-164 T 31-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DY252_06905 90e656a47e8d340a01260e0a80d68d0c 431 SUPERFAMILY SSF53720 28 430 1.22E-88 T 31-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DY252_06905 90e656a47e8d340a01260e0a80d68d0c 431 Gene3D G3DSA:3.40.50.1980 31 232 3.3E-128 T 31-10-2018 DY252_06905 90e656a47e8d340a01260e0a80d68d0c 431 Gene3D G3DSA:3.40.50.1980 234 350 3.3E-128 T 31-10-2018 DY252_06905 90e656a47e8d340a01260e0a80d68d0c 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 34 427 2.3E-165 T 31-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DY252_06905 90e656a47e8d340a01260e0a80d68d0c 431 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 1.8E-85 T 31-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DY252_06905 90e656a47e8d340a01260e0a80d68d0c 431 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 1.8E-85 T 31-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DY252_06905 90e656a47e8d340a01260e0a80d68d0c 431 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 1.8E-85 T 31-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DY252_06905 90e656a47e8d340a01260e0a80d68d0c 431 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 1.8E-85 T 31-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DY252_06905 90e656a47e8d340a01260e0a80d68d0c 431 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 1.8E-85 T 31-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DY252_06905 90e656a47e8d340a01260e0a80d68d0c 431 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 1.8E-85 T 31-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DY252_06905 90e656a47e8d340a01260e0a80d68d0c 431 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 1.8E-85 T 31-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DY252_06905 90e656a47e8d340a01260e0a80d68d0c 431 PRINTS PR00083 Histidinol dehydrogenase signature 34 58 1.8E-85 T 31-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 SMART SM00382 199 344 1.6E-10 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 SMART SM00382 596 747 1.5E-10 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 Gene3D G3DSA:1.10.8.60 765 861 7.9E-31 T 31-10-2018 DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 SUPERFAMILY SSF52540 545 846 7.9E-84 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 630 648 - T 31-10-2018 IPR028299 ClpA/B, conserved site 2 DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 Gene3D G3DSA:3.40.50.300 151 343 4.5E-74 T 31-10-2018 DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 765 844 1.9E-28 T 31-10-2018 IPR019489 Clp ATPase, C-terminal DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.1E-11 T 31-10-2018 IPR004176 Clp, N-terminal DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 61 8.3E-9 T 31-10-2018 IPR004176 Clp, N-terminal DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 Gene3D G3DSA:3.40.50.300 549 763 7.6E-88 T 31-10-2018 DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 SUPERFAMILY SSF81923 4 157 3.14E-37 T 31-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 SUPERFAMILY SSF52540 160 539 7.47E-97 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 335 1.3E-12 T 31-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 Gene3D G3DSA:1.10.1780.10 1 150 4.7E-30 T 31-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 Pfam PF07724 AAA domain (Cdc48 subfamily) 595 758 1.2E-55 T 31-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 31-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 707 721 2.3E-42 T 31-10-2018 IPR001270 ClpA/B family GO:0005524 DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 600 618 2.3E-42 T 31-10-2018 IPR001270 ClpA/B family GO:0005524 DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 645 663 2.3E-42 T 31-10-2018 IPR001270 ClpA/B family GO:0005524 DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 674 692 2.3E-42 T 31-10-2018 IPR001270 ClpA/B family GO:0005524 DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 Gene3D G3DSA:3.40.50.300 344 543 1.1E-69 T 31-10-2018 DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 31-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 DY252_07305 6be0c19cd6e3933715c0a3594cb40a42 863 SMART SM01086 765 854 2.1E-38 T 31-10-2018 IPR019489 Clp ATPase, C-terminal DY252_09315 5631b3a672b024bca14f5a38ee638201 489 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 174 479 1.7E-125 T 31-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DY252_09315 5631b3a672b024bca14f5a38ee638201 489 SUPERFAMILY SSF53187 169 485 2.61E-118 T 31-10-2018 DY252_09315 5631b3a672b024bca14f5a38ee638201 489 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 334 341 - T 31-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DY252_09315 5631b3a672b024bca14f5a38ee638201 489 SUPERFAMILY SSF52949 2 172 1.59E-29 T 31-10-2018 DY252_09315 5631b3a672b024bca14f5a38ee638201 489 Gene3D G3DSA:3.40.630.10 165 486 6.4E-131 T 31-10-2018 DY252_09315 5631b3a672b024bca14f5a38ee638201 489 Gene3D G3DSA:3.40.220.10 1 164 5.6E-30 T 31-10-2018 DY252_09315 5631b3a672b024bca14f5a38ee638201 489 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 1 488 35.478 T 31-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 DY252_09315 5631b3a672b024bca14f5a38ee638201 489 PRINTS PR00481 Cytosol aminopeptidase signature 249 266 1.2E-52 T 31-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DY252_09315 5631b3a672b024bca14f5a38ee638201 489 PRINTS PR00481 Cytosol aminopeptidase signature 271 292 1.2E-52 T 31-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DY252_09315 5631b3a672b024bca14f5a38ee638201 489 PRINTS PR00481 Cytosol aminopeptidase signature 359 374 1.2E-52 T 31-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DY252_09315 5631b3a672b024bca14f5a38ee638201 489 PRINTS PR00481 Cytosol aminopeptidase signature 330 350 1.2E-52 T 31-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DY252_09315 5631b3a672b024bca14f5a38ee638201 489 PRINTS PR00481 Cytosol aminopeptidase signature 308 329 1.2E-52 T 31-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DY252_09315 5631b3a672b024bca14f5a38ee638201 489 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 136 2.6E-21 T 31-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DY252_11490 740b66029e909388cac458f7fdf95d65 400 PIRSF PIRSF017085 3 400 1.5E-142 T 31-10-2018 IPR016683 Glycosyl transferase, family 28, RedA, predicted DY252_11490 740b66029e909388cac458f7fdf95d65 400 Gene3D G3DSA:3.40.50.2000 213 372 1.7E-14 T 31-10-2018 DY252_11490 740b66029e909388cac458f7fdf95d65 400 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 262 364 9.5E-8 T 31-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 DY252_11490 740b66029e909388cac458f7fdf95d65 400 SUPERFAMILY SSF53756 10 369 6.62E-15 T 31-10-2018 DY252_13465 c712542333181d89f330b9b638e5cc2a 686 Gene3D G3DSA:3.40.50.740 455 633 1.3E-20 T 31-10-2018 DY252_13465 c712542333181d89f330b9b638e5cc2a 686 Gene3D G3DSA:3.40.50.740 278 339 8.3E-7 T 31-10-2018 DY252_13465 c712542333181d89f330b9b638e5cc2a 686 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 31-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13465 c712542333181d89f330b9b638e5cc2a 686 Gene3D G3DSA:3.10.20.740 1 124 3.6E-42 T 31-10-2018 DY252_13465 c712542333181d89f330b9b638e5cc2a 686 SUPERFAMILY SSF54292 1 74 6.57E-21 T 31-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DY252_13465 c712542333181d89f330b9b638e5cc2a 686 Pfam PF00384 Molybdopterin oxidoreductase 271 599 1.7E-72 T 31-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13465 c712542333181d89f330b9b638e5cc2a 686 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 636 672 3.1E-15 T 31-10-2018 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13465 c712542333181d89f330b9b638e5cc2a 686 Gene3D G3DSA:3.30.70.20 125 204 1.5E-7 T 31-10-2018 DY252_13465 c712542333181d89f330b9b638e5cc2a 686 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 31-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13465 c712542333181d89f330b9b638e5cc2a 686 SUPERFAMILY SSF53706 213 626 1.7E-103 T 31-10-2018 DY252_13465 c712542333181d89f330b9b638e5cc2a 686 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 597 7.5E-232 T 31-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13465 c712542333181d89f330b9b638e5cc2a 686 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 122 2.3E-17 T 31-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13465 c712542333181d89f330b9b638e5cc2a 686 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 31-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13465 c712542333181d89f330b9b638e5cc2a 686 Gene3D G3DSA:3.40.228.10 340 389 8.3E-7 T 31-10-2018 DY252_13465 c712542333181d89f330b9b638e5cc2a 686 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 76 1.0E-18 T 31-10-2018 DY252_13465 c712542333181d89f330b9b638e5cc2a 686 SUPERFAMILY SSF54862 75 211 4.6E-38 T 31-10-2018 DY252_13465 c712542333181d89f330b9b638e5cc2a 686 SMART SM00929 83 123 4.8E-21 T 31-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_17270 628e0aa27d13c17bff3cc09619f6c40b 282 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 176 6.6E-13 T 31-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DY252_17270 628e0aa27d13c17bff3cc09619f6c40b 282 Gene3D G3DSA:3.40.50.300 2 204 5.1E-28 T 31-10-2018 DY252_17270 628e0aa27d13c17bff3cc09619f6c40b 282 SUPERFAMILY SSF52540 7 238 1.69E-36 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_17270 628e0aa27d13c17bff3cc09619f6c40b 282 SMART SM00382 25 184 1.6E-9 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_14255 5e93f1d144f06634bb834804a783d38b 287 Gene3D G3DSA:3.20.20.150 8 283 3.9E-82 T 31-10-2018 DY252_14255 5e93f1d144f06634bb834804a783d38b 287 SUPERFAMILY SSF51658 30 265 8.55E-11 T 31-10-2018 IPR036237 Xylose isomerase-like superfamily DY252_14255 5e93f1d144f06634bb834804a783d38b 287 Pfam PF05114 Protein of unknown function (DUF692) 11 273 2.2E-98 T 31-10-2018 IPR007801 Uncharacterised protein family UPF0276 DY252_14255 5e93f1d144f06634bb834804a783d38b 287 Hamap MF_00697 UPF0276 protein . 11 283 44.133 T 31-10-2018 IPR007801 Uncharacterised protein family UPF0276 DY252_19450 8bf7feea6b647d43bce44b3cf8094cff 752 Gene3D G3DSA:2.40.170.20 222 752 5.0E-73 T 31-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DY252_19450 8bf7feea6b647d43bce44b3cf8094cff 752 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 112 752 2.3E-112 T 31-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DY252_19450 8bf7feea6b647d43bce44b3cf8094cff 752 Pfam PF07715 TonB-dependent Receptor Plug Domain 110 205 4.4E-14 T 31-10-2018 IPR012910 TonB-dependent receptor, plug domain DY252_19450 8bf7feea6b647d43bce44b3cf8094cff 752 SUPERFAMILY SSF56935 90 752 2.09E-94 T 31-10-2018 DY252_19450 8bf7feea6b647d43bce44b3cf8094cff 752 Gene3D G3DSA:2.170.130.10 87 220 2.6E-21 T 31-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DY252_19450 8bf7feea6b647d43bce44b3cf8094cff 752 Pfam PF00593 TonB dependent receptor 279 749 1.7E-33 T 31-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DY252_10750 674a7393676c5caaafa29e24f349374b 299 Pfam PF00691 OmpA family 198 291 3.2E-11 T 31-10-2018 IPR006665 OmpA-like domain DY252_10750 674a7393676c5caaafa29e24f349374b 299 Gene3D G3DSA:3.30.1330.60 170 297 5.0E-21 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_10750 674a7393676c5caaafa29e24f349374b 299 PRINTS PR01021 OMPA domain signature 199 221 1.1E-11 T 31-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DY252_10750 674a7393676c5caaafa29e24f349374b 299 PRINTS PR01021 OMPA domain signature 228 243 1.1E-11 T 31-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DY252_10750 674a7393676c5caaafa29e24f349374b 299 PRINTS PR01021 OMPA domain signature 243 259 1.1E-11 T 31-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DY252_10750 674a7393676c5caaafa29e24f349374b 299 SUPERFAMILY SSF103088 180 297 1.11E-22 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_07105 58088cbe64a61fabf9f103a94a9ceaed 586 Pfam PF01590 GAF domain 42 206 6.3E-12 T 31-10-2018 IPR003018 GAF domain GO:0005515 DY252_07105 58088cbe64a61fabf9f103a94a9ceaed 586 Gene3D G3DSA:3.30.450.40 4 217 4.7E-39 T 31-10-2018 IPR029016 GAF-like domain superfamily DY252_07105 58088cbe64a61fabf9f103a94a9ceaed 586 SUPERFAMILY SSF109604 441 554 1.32E-8 T 31-10-2018 DY252_07105 58088cbe64a61fabf9f103a94a9ceaed 586 Pfam PF13487 HD domain 442 507 6.1E-21 T 31-10-2018 DY252_07105 58088cbe64a61fabf9f103a94a9ceaed 586 SMART SM00065 41 216 1.8E-14 T 31-10-2018 IPR003018 GAF domain GO:0005515 DY252_07105 58088cbe64a61fabf9f103a94a9ceaed 586 SUPERFAMILY SSF109604 229 314 2.06E-9 T 31-10-2018 DY252_07105 58088cbe64a61fabf9f103a94a9ceaed 586 SUPERFAMILY SSF55781 23 219 9.38E-28 T 31-10-2018 DY252_07105 58088cbe64a61fabf9f103a94a9ceaed 586 Gene3D G3DSA:1.10.3210.10 218 329 1.2E-17 T 31-10-2018 DY252_07105 58088cbe64a61fabf9f103a94a9ceaed 586 Gene3D G3DSA:1.10.3210.10 436 563 2.8E-28 T 31-10-2018 DY252_13825 163b719d21c687afef8cb2d64b1258d7 428 Pfam PF01546 Peptidase family M20/M25/M40 100 418 6.8E-38 T 31-10-2018 IPR002933 Peptidase M20 GO:0016787 DY252_13825 163b719d21c687afef8cb2d64b1258d7 428 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 26 412 7.6E-89 T 31-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase DY252_13825 163b719d21c687afef8cb2d64b1258d7 428 SUPERFAMILY SSF55031 207 315 2.36E-10 T 31-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DY252_13825 163b719d21c687afef8cb2d64b1258d7 428 Gene3D G3DSA:3.30.70.360 207 334 3.9E-141 T 31-10-2018 DY252_13825 163b719d21c687afef8cb2d64b1258d7 428 SUPERFAMILY SSF53187 9 422 8.47E-61 T 31-10-2018 DY252_13825 163b719d21c687afef8cb2d64b1258d7 428 Gene3D G3DSA:3.40.630.10 28 422 3.9E-141 T 31-10-2018 DY252_13825 163b719d21c687afef8cb2d64b1258d7 428 Pfam PF07687 Peptidase dimerisation domain 204 310 2.0E-14 T 31-10-2018 IPR011650 Peptidase M20, dimerisation domain DY252_18740 b1d3c228d6031a95b1031d6c193bcc96 163 SMART SM00344 4 113 2.2E-37 T 31-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DY252_18740 b1d3c228d6031a95b1031d6c193bcc96 163 SUPERFAMILY SSF54909 67 147 3.62E-19 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_18740 b1d3c228d6031a95b1031d6c193bcc96 163 SUPERFAMILY SSF46785 3 62 5.35E-18 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_18740 b1d3c228d6031a95b1031d6c193bcc96 163 Pfam PF01037 Lrp/AsnC ligand binding domain 71 143 5.4E-22 T 31-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DY252_18740 b1d3c228d6031a95b1031d6c193bcc96 163 Gene3D G3DSA:3.30.70.920 56 150 5.9E-22 T 31-10-2018 DY252_18740 b1d3c228d6031a95b1031d6c193bcc96 163 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 3.8E-19 T 31-10-2018 DY252_18740 b1d3c228d6031a95b1031d6c193bcc96 163 Gene3D G3DSA:1.10.10.10 1 55 1.5E-24 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_18740 b1d3c228d6031a95b1031d6c193bcc96 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.4E-15 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_18740 b1d3c228d6031a95b1031d6c193bcc96 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.4E-15 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_18740 b1d3c228d6031a95b1031d6c193bcc96 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.4E-15 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_18415 16154b154245385bbf29ac2508a99646 568 Gene3D G3DSA:2.70.98.90 74 346 2.6E-38 T 31-10-2018 IPR038221 YidC, periplasmic domain superfamily DY252_18415 16154b154245385bbf29ac2508a99646 568 Pfam PF02096 60Kd inner membrane protein 367 563 1.7E-61 T 31-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DY252_18415 16154b154245385bbf29ac2508a99646 568 Pfam PF14849 YidC periplasmic domain 78 355 1.8E-81 T 31-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain DY252_18415 16154b154245385bbf29ac2508a99646 568 PRINTS PR01900 YidC translocation/secretion protein signature 519 543 1.7E-23 T 31-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DY252_18415 16154b154245385bbf29ac2508a99646 568 PRINTS PR01900 YidC translocation/secretion protein signature 352 368 1.7E-23 T 31-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DY252_18415 16154b154245385bbf29ac2508a99646 568 PRINTS PR01900 YidC translocation/secretion protein signature 500 515 1.7E-23 T 31-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DY252_18415 16154b154245385bbf29ac2508a99646 568 PRINTS PR00701 60kDa inner membrane protein signature 84 105 9.6E-19 T 31-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DY252_18415 16154b154245385bbf29ac2508a99646 568 PRINTS PR00701 60kDa inner membrane protein signature 337 357 9.6E-19 T 31-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DY252_18415 16154b154245385bbf29ac2508a99646 568 PRINTS PR00701 60kDa inner membrane protein signature 428 451 9.6E-19 T 31-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DY252_18415 16154b154245385bbf29ac2508a99646 568 PRINTS PR00701 60kDa inner membrane protein signature 256 271 9.6E-19 T 31-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DY252_18415 16154b154245385bbf29ac2508a99646 568 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 566 22.606 T 31-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 DY252_18415 16154b154245385bbf29ac2508a99646 568 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 366 563 1.4E-71 T 31-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_18415 16154b154245385bbf29ac2508a99646 568 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 365 6.9E-92 T 31-10-2018 IPR028053 Membrane insertase YidC, N-terminal DY252_20810 a15ea819ca5582a54d8ce2ea77db5166 183 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 49 62 5.9E-11 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_20810 a15ea819ca5582a54d8ce2ea77db5166 183 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 49 5.9E-11 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_20810 a15ea819ca5582a54d8ce2ea77db5166 183 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 73 93 5.9E-11 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_20810 a15ea819ca5582a54d8ce2ea77db5166 183 ProSitePatterns PS00552 MerR-type HTH domain signature. 40 62 - T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_20810 a15ea819ca5582a54d8ce2ea77db5166 183 SMART SM00422 37 106 1.2E-23 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_20810 a15ea819ca5582a54d8ce2ea77db5166 183 Pfam PF13411 MerR HTH family regulatory protein 39 104 3.2E-17 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_20810 a15ea819ca5582a54d8ce2ea77db5166 183 Gene3D G3DSA:1.10.1660.10 30 153 1.7E-30 T 31-10-2018 DY252_20810 a15ea819ca5582a54d8ce2ea77db5166 183 SUPERFAMILY SSF46955 39 152 4.4E-31 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_18640 f3b3ce02ed71336d2aff6e9d8dc7ec7d 340 SUPERFAMILY SSF50129 15 140 1.83E-30 T 31-10-2018 IPR011032 GroES-like superfamily DY252_18640 f3b3ce02ed71336d2aff6e9d8dc7ec7d 340 Pfam PF13602 Zinc-binding dehydrogenase 194 334 1.8E-21 T 31-10-2018 DY252_18640 f3b3ce02ed71336d2aff6e9d8dc7ec7d 340 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 151 172 - T 31-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 DY252_18640 f3b3ce02ed71336d2aff6e9d8dc7ec7d 340 SUPERFAMILY SSF51735 116 288 1.71E-37 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_18640 f3b3ce02ed71336d2aff6e9d8dc7ec7d 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 89 3.3E-6 T 31-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DY252_18640 f3b3ce02ed71336d2aff6e9d8dc7ec7d 340 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 337 2.4E-137 T 31-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 DY252_18640 f3b3ce02ed71336d2aff6e9d8dc7ec7d 340 SMART SM00829 13 335 7.0E-13 T 31-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DY252_18640 f3b3ce02ed71336d2aff6e9d8dc7ec7d 340 Gene3D G3DSA:3.40.50.720 127 276 4.9E-106 T 31-10-2018 DY252_18640 f3b3ce02ed71336d2aff6e9d8dc7ec7d 340 Gene3D G3DSA:3.90.180.10 25 334 4.9E-106 T 31-10-2018 DY252_07925 ffdb69ded55322ac8c8b16fb66470c07 670 SMART SM00388 449 516 2.9E-11 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_07925 ffdb69ded55322ac8c8b16fb66470c07 670 Gene3D G3DSA:1.20.1480.50 319 411 7.3E-8 T 31-10-2018 DY252_07925 ffdb69ded55322ac8c8b16fb66470c07 670 SUPERFAMILY SSF55874 508 667 3.14E-39 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_07925 ffdb69ded55322ac8c8b16fb66470c07 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 614 2.5E-20 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_07925 ffdb69ded55322ac8c8b16fb66470c07 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 628 2.5E-20 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_07925 ffdb69ded55322ac8c8b16fb66470c07 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 630 648 2.5E-20 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_07925 ffdb69ded55322ac8c8b16fb66470c07 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 667 2.5E-20 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_07925 ffdb69ded55322ac8c8b16fb66470c07 670 SUPERFAMILY SSF103190 209 319 2.17E-10 T 31-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DY252_07925 ffdb69ded55322ac8c8b16fb66470c07 670 SUPERFAMILY SSF47384 444 514 1.1E-9 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_07925 ffdb69ded55322ac8c8b16fb66470c07 670 SUPERFAMILY SSF158472 354 404 1.44E-6 T 31-10-2018 DY252_07925 ffdb69ded55322ac8c8b16fb66470c07 670 Pfam PF00512 His Kinase A (phospho-acceptor) domain 451 514 5.1E-12 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_07925 ffdb69ded55322ac8c8b16fb66470c07 670 Pfam PF00672 HAMP domain 356 403 1.0E-6 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_07925 ffdb69ded55322ac8c8b16fb66470c07 670 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 669 4.0E-22 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_07925 ffdb69ded55322ac8c8b16fb66470c07 670 Pfam PF17202 Single cache domain 3 216 326 6.5E-29 T 31-10-2018 IPR033463 Single cache domain 3 DY252_07925 ffdb69ded55322ac8c8b16fb66470c07 670 Gene3D G3DSA:3.30.565.10 520 670 4.5E-42 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_07925 ffdb69ded55322ac8c8b16fb66470c07 670 Gene3D G3DSA:1.10.287.130 425 511 3.6E-20 T 31-10-2018 DY252_07925 ffdb69ded55322ac8c8b16fb66470c07 670 SMART SM00387 559 670 1.6E-33 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_07925 ffdb69ded55322ac8c8b16fb66470c07 670 SMART SM00304 354 407 7.0E-8 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_12780 83ed56abc84643ad91f17d67dc772396 336 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 99 117 - T 31-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DY252_12780 83ed56abc84643ad91f17d67dc772396 336 Gene3D G3DSA:3.20.20.70 9 253 9.3E-81 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_12780 83ed56abc84643ad91f17d67dc772396 336 PIRSF PIRSF006621 2 331 9.7E-108 T 31-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DY252_12780 83ed56abc84643ad91f17d67dc772396 336 Pfam PF01207 Dihydrouridine synthase (Dus) 15 318 7.6E-109 T 31-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DY252_12780 83ed56abc84643ad91f17d67dc772396 336 Gene3D G3DSA:1.10.1200.80 257 329 8.3E-11 T 31-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 DY252_12780 83ed56abc84643ad91f17d67dc772396 336 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 5 322 1.9E-122 T 31-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 DY252_12780 83ed56abc84643ad91f17d67dc772396 336 SUPERFAMILY SSF51395 14 322 1.61E-86 T 31-10-2018 DY252_03950 076f726a6ff2ca40a9e5c4ee2972fc42 449 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 246 445 5.5E-21 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_03950 076f726a6ff2ca40a9e5c4ee2972fc42 449 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 208 446 3.9E-66 T 31-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 DY252_03950 076f726a6ff2ca40a9e5c4ee2972fc42 449 Pfam PF11812 Domain of unknown function (DUF3333) 34 182 4.0E-54 T 31-10-2018 IPR024573 Domain of unknown function DUF3333 DY252_03950 076f726a6ff2ca40a9e5c4ee2972fc42 449 Gene3D G3DSA:1.10.3720.10 223 448 4.0E-34 T 31-10-2018 IPR035906 MetI-like superfamily DY252_03950 076f726a6ff2ca40a9e5c4ee2972fc42 449 SUPERFAMILY SSF161098 225 436 1.57E-36 T 31-10-2018 IPR035906 MetI-like superfamily DY252_02990 c3e3a7a9e7f78327224ee9c2edf50054 556 SMART SM01049 32 123 1.8E-17 T 31-10-2018 IPR033480 Single Cache domain 2 DY252_02990 c3e3a7a9e7f78327224ee9c2edf50054 556 SMART SM00283 293 547 2.4E-47 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_02990 c3e3a7a9e7f78327224ee9c2edf50054 556 Gene3D G3DSA:3.30.450.20 28 168 5.3E-24 T 31-10-2018 DY252_02990 c3e3a7a9e7f78327224ee9c2edf50054 556 Pfam PF17200 Single Cache domain 2 39 180 4.6E-30 T 31-10-2018 IPR033480 Single Cache domain 2 DY252_02990 c3e3a7a9e7f78327224ee9c2edf50054 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 4.7E-22 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_02990 c3e3a7a9e7f78327224ee9c2edf50054 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 343 4.7E-22 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_02990 c3e3a7a9e7f78327224ee9c2edf50054 556 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 418 4.7E-22 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_02990 c3e3a7a9e7f78327224ee9c2edf50054 556 Gene3D G3DSA:1.10.287.950 260 554 2.3E-56 T 31-10-2018 DY252_02990 c3e3a7a9e7f78327224ee9c2edf50054 556 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 201 469 4.0E-4 T 31-10-2018 DY252_02990 c3e3a7a9e7f78327224ee9c2edf50054 556 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 368 511 3.4E-33 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_02990 c3e3a7a9e7f78327224ee9c2edf50054 556 SUPERFAMILY SSF58104 279 546 7.85E-60 T 31-10-2018 DY252_02990 c3e3a7a9e7f78327224ee9c2edf50054 556 Gene3D G3DSA:1.20.1480.50 169 259 5.3E-11 T 31-10-2018 DY252_02260 f45c1f028279132fcafebf1fd715bf4b 778 SUPERFAMILY SSF48179 346 435 5.27E-13 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_02260 f45c1f028279132fcafebf1fd715bf4b 778 Gene3D G3DSA:3.40.50.720 2 197 2.7E-58 T 31-10-2018 DY252_02260 f45c1f028279132fcafebf1fd715bf4b 778 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 10 193 6.7E-45 T 31-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DY252_02260 f45c1f028279132fcafebf1fd715bf4b 778 SUPERFAMILY SSF52096 470 775 8.09E-35 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_02260 f45c1f028279132fcafebf1fd715bf4b 778 Gene3D G3DSA:3.90.226.10 469 652 1.2E-29 T 31-10-2018 DY252_02260 f45c1f028279132fcafebf1fd715bf4b 778 SUPERFAMILY SSF48179 195 303 1.19E-18 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_02260 f45c1f028279132fcafebf1fd715bf4b 778 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 351 405 3.7E-6 T 31-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DY252_02260 f45c1f028279132fcafebf1fd715bf4b 778 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 196 297 1.9E-14 T 31-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DY252_02260 f45c1f028279132fcafebf1fd715bf4b 778 Pfam PF00378 Enoyl-CoA hydratase/isomerase 474 613 1.6E-13 T 31-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DY252_02260 f45c1f028279132fcafebf1fd715bf4b 778 Gene3D G3DSA:1.10.1040.10 198 325 2.9E-21 T 31-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DY252_02260 f45c1f028279132fcafebf1fd715bf4b 778 SUPERFAMILY SSF51735 8 195 1.74E-44 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_02260 f45c1f028279132fcafebf1fd715bf4b 778 Gene3D G3DSA:1.10.1040.10 351 422 1.1E-8 T 31-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DY252_18625 7a8eb7bd6b6d420f0209a70049c56c2e 328 Gene3D G3DSA:3.20.20.60 1 325 6.1E-110 T 31-10-2018 DY252_18625 7a8eb7bd6b6d420f0209a70049c56c2e 328 SUPERFAMILY SSF51621 12 270 6.8E-63 T 31-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DY252_18625 7a8eb7bd6b6d420f0209a70049c56c2e 328 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 259 1.6E-38 T 31-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 DY252_18625 7a8eb7bd6b6d420f0209a70049c56c2e 328 PIRSF PIRSF015582 1 328 3.4E-86 T 31-10-2018 IPR011206 Citrate lyase beta subunit-like DY252_07155 287046cacc205c0d659a533ec677039c 268 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 8 251 4.3E-95 T 31-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DY252_07155 287046cacc205c0d659a533ec677039c 268 Pfam PF00557 Metallopeptidase family M24 15 243 1.1E-53 T 31-10-2018 IPR000994 Peptidase M24 DY252_07155 287046cacc205c0d659a533ec677039c 268 SUPERFAMILY SSF55920 8 256 8.77E-90 T 31-10-2018 IPR036005 Creatinase/aminopeptidase-like DY252_07155 287046cacc205c0d659a533ec677039c 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 2.1E-23 T 31-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DY252_07155 287046cacc205c0d659a533ec677039c 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 2.1E-23 T 31-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DY252_07155 287046cacc205c0d659a533ec677039c 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 71 84 2.1E-23 T 31-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DY252_07155 287046cacc205c0d659a533ec677039c 268 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 2.1E-23 T 31-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DY252_07155 287046cacc205c0d659a533ec677039c 268 Hamap MF_01974 Methionine aminopeptidase [map]. 6 252 41.376 T 31-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DY252_07155 287046cacc205c0d659a533ec677039c 268 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 169 187 - T 31-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DY252_07155 287046cacc205c0d659a533ec677039c 268 Gene3D G3DSA:3.90.230.10 2 261 5.3E-108 T 31-10-2018 DY252_18720 a7e7127cff3f1c3f9bf502e303638a1d 329 SUPERFAMILY SSF53686 6 317 2.88E-83 T 31-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DY252_18720 a7e7127cff3f1c3f9bf502e303638a1d 329 Gene3D G3DSA:3.40.50.1100 53 149 1.7E-101 T 31-10-2018 DY252_18720 a7e7127cff3f1c3f9bf502e303638a1d 329 Gene3D G3DSA:3.40.50.1100 10 312 1.7E-101 T 31-10-2018 DY252_18720 a7e7127cff3f1c3f9bf502e303638a1d 329 TIGRFAM TIGR02991 ectoine_eutB: ectoine utilization protein EutB 5 321 2.0E-144 T 31-10-2018 IPR014333 Ectoine utilization protein EutB KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DY252_18720 a7e7127cff3f1c3f9bf502e303638a1d 329 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 307 1.2E-75 T 31-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DY252_18720 a7e7127cff3f1c3f9bf502e303638a1d 329 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 45 58 - T 31-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DY252_01115 b5e30ca02aa52351a33f009aac34e58a 196 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 69 182 1.7E-35 T 31-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DY252_01115 b5e30ca02aa52351a33f009aac34e58a 196 SUPERFAMILY SSF55486 66 188 6.1E-42 T 31-10-2018 DY252_01115 b5e30ca02aa52351a33f009aac34e58a 196 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 152 162 - T 31-10-2018 IPR020549 Endoribonuclease YbeY, conserved site DY252_01115 b5e30ca02aa52351a33f009aac34e58a 196 Gene3D G3DSA:3.40.390.30 52 191 1.0E-43 T 31-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 DY252_01115 b5e30ca02aa52351a33f009aac34e58a 196 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 6 186 22.612 T 31-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DY252_01115 b5e30ca02aa52351a33f009aac34e58a 196 Pfam PF02130 Uncharacterized protein family UPF0054 66 181 2.3E-35 T 31-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DY252_19710 e41af95bb87208ab3c218512fcf6ba7a 433 SUPERFAMILY SSF63825 158 290 1.52E-5 T 31-10-2018 DY252_19710 e41af95bb87208ab3c218512fcf6ba7a 433 Pfam PF13449 Esterase-like activity of phytase 53 412 2.1E-52 T 31-10-2018 IPR027372 Phytase-like domain DY252_02980 0e9c178b63ae3229703b22e018deae76 246 Pfam PF02348 Cytidylyltransferase 8 217 7.1E-38 T 31-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 DY252_02980 0e9c178b63ae3229703b22e018deae76 246 SUPERFAMILY SSF53448 8 244 3.15E-52 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_02980 0e9c178b63ae3229703b22e018deae76 246 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 5 245 32.963 T 31-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 DY252_02980 0e9c178b63ae3229703b22e018deae76 246 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 8 238 4.5E-59 T 31-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 DY252_02980 0e9c178b63ae3229703b22e018deae76 246 Gene3D G3DSA:3.90.550.10 7 246 6.4E-76 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_22130 8f2c632c43d113f28f2c79feb6f1b6df 329 Gene3D G3DSA:3.40.190.150 31 318 1.4E-77 T 31-10-2018 DY252_22130 8f2c632c43d113f28f2c79feb6f1b6df 329 SUPERFAMILY SSF53850 116 295 1.25E-10 T 31-10-2018 DY252_22130 8f2c632c43d113f28f2c79feb6f1b6df 329 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 51 291 2.3E-46 T 31-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DY252_22130 8f2c632c43d113f28f2c79feb6f1b6df 329 Gene3D G3DSA:3.40.190.10 128 256 1.4E-77 T 31-10-2018 DY252_22130 8f2c632c43d113f28f2c79feb6f1b6df 329 PIRSF PIRSF017082 1 329 8.0E-71 T 31-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DY252_09270 194b648da53f06cb06bb0220796b7b28 488 Pfam PF01875 Memo-like protein 6 265 7.1E-45 T 31-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 DY252_09270 194b648da53f06cb06bb0220796b7b28 488 SUPERFAMILY SSF143447 294 470 8.24E-49 T 31-10-2018 IPR036071 AMMECR1 domain superfamily DY252_09270 194b648da53f06cb06bb0220796b7b28 488 Gene3D G3DSA:3.30.700.20 296 396 3.0E-44 T 31-10-2018 IPR027485 AMMECR1, N-terminal DY252_09270 194b648da53f06cb06bb0220796b7b28 488 Gene3D G3DSA:3.30.1490.150 397 469 3.0E-44 T 31-10-2018 DY252_09270 194b648da53f06cb06bb0220796b7b28 488 Hamap MF_00055 MEMO1 family protein . 3 269 44.731 T 31-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 DY252_09270 194b648da53f06cb06bb0220796b7b28 488 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 5 267 5.2E-72 T 31-10-2018 DY252_09270 194b648da53f06cb06bb0220796b7b28 488 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 299 470 2.5E-56 T 31-10-2018 IPR027623 AmmeMemoRadiSam system protein A DY252_09270 194b648da53f06cb06bb0220796b7b28 488 Gene3D G3DSA:3.40.830.10 2 270 1.0E-58 T 31-10-2018 DY252_09270 194b648da53f06cb06bb0220796b7b28 488 Pfam PF01871 AMMECR1 302 468 9.9E-41 T 31-10-2018 IPR002733 AMMECR1 domain DY252_18575 bd43a2c7b71fd4e7a416259f58a27671 315 SUPERFAMILY SSF55073 140 297 5.96E-49 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_18575 bd43a2c7b71fd4e7a416259f58a27671 315 Gene3D G3DSA:1.20.120.30 11 133 1.1E-11 T 31-10-2018 DY252_18575 bd43a2c7b71fd4e7a416259f58a27671 315 Pfam PF13682 Chemoreceptor zinc-binding domain 47 94 5.1E-7 T 31-10-2018 IPR025991 Chemoreceptor zinc-binding domain DY252_18575 bd43a2c7b71fd4e7a416259f58a27671 315 SMART SM00267 123 296 2.2E-55 T 31-10-2018 IPR000160 GGDEF domain DY252_18575 bd43a2c7b71fd4e7a416259f58a27671 315 Gene3D G3DSA:3.30.70.270 134 299 1.9E-55 T 31-10-2018 DY252_18575 bd43a2c7b71fd4e7a416259f58a27671 315 Pfam PF00990 Diguanylate cyclase, GGDEF domain 136 292 5.7E-45 T 31-10-2018 IPR000160 GGDEF domain DY252_18575 bd43a2c7b71fd4e7a416259f58a27671 315 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 135 295 2.9E-52 T 31-10-2018 IPR000160 GGDEF domain DY252_06400 cb94186adcc467704b23c52aad255de5 332 Pfam PF00892 EamA-like transporter family 175 305 1.6E-21 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_06400 cb94186adcc467704b23c52aad255de5 332 Pfam PF00892 EamA-like transporter family 26 161 1.7E-7 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_06400 cb94186adcc467704b23c52aad255de5 332 SUPERFAMILY SSF103481 212 307 1.31E-14 T 31-10-2018 DY252_06400 cb94186adcc467704b23c52aad255de5 332 SUPERFAMILY SSF103481 59 165 2.88E-8 T 31-10-2018 DY252_15310 98462de1052a78c2928c745b3d740e92 523 SUPERFAMILY SSF161098 320 501 2.09E-23 T 31-10-2018 IPR035906 MetI-like superfamily DY252_15310 98462de1052a78c2928c745b3d740e92 523 SUPERFAMILY SSF161098 52 227 7.72E-15 T 31-10-2018 IPR035906 MetI-like superfamily DY252_15310 98462de1052a78c2928c745b3d740e92 523 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 70 238 1.9E-10 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_15310 98462de1052a78c2928c745b3d740e92 523 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 340 513 7.5E-18 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_15310 98462de1052a78c2928c745b3d740e92 523 Gene3D G3DSA:1.10.3720.10 314 516 4.8E-19 T 31-10-2018 IPR035906 MetI-like superfamily DY252_15310 98462de1052a78c2928c745b3d740e92 523 Gene3D G3DSA:1.10.3720.10 54 244 3.2E-9 T 31-10-2018 IPR035906 MetI-like superfamily DY252_12115 901ee501e47f882df16c29b6f655f7a1 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 8 112 2.6E-38 T 31-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 DY252_12115 901ee501e47f882df16c29b6f655f7a1 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 31-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 DY252_12115 901ee501e47f882df16c29b6f655f7a1 113 Gene3D G3DSA:2.60.300.12 7 113 1.7E-37 T 31-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DY252_12115 901ee501e47f882df16c29b6f655f7a1 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 6.2E-20 T 31-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DY252_12115 901ee501e47f882df16c29b6f655f7a1 113 SUPERFAMILY SSF89360 8 102 1.29E-28 T 31-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DY252_01830 5ce8a8721b2e7fbbaf601fa3e3d9744e 352 Gene3D G3DSA:3.30.450.40 115 345 3.6E-33 T 31-10-2018 IPR029016 GAF-like domain superfamily DY252_01830 5ce8a8721b2e7fbbaf601fa3e3d9744e 352 Pfam PF01628 HrcA protein C terminal domain 114 337 1.5E-54 T 31-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 DY252_01830 5ce8a8721b2e7fbbaf601fa3e3d9744e 352 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 15 65 2.2E-5 T 31-10-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 DY252_01830 5ce8a8721b2e7fbbaf601fa3e3d9744e 352 Gene3D G3DSA:1.10.10.10 2 94 1.2E-29 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_01830 5ce8a8721b2e7fbbaf601fa3e3d9744e 352 PIRSF PIRSF005485 9 352 6.9E-106 T 31-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 DY252_01830 5ce8a8721b2e7fbbaf601fa3e3d9744e 352 SUPERFAMILY SSF55781 82 351 5.49E-54 T 31-10-2018 DY252_01830 5ce8a8721b2e7fbbaf601fa3e3d9744e 352 SUPERFAMILY SSF46785 12 92 4.91E-19 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_01830 5ce8a8721b2e7fbbaf601fa3e3d9744e 352 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 11 344 27.686 T 31-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 DY252_01830 5ce8a8721b2e7fbbaf601fa3e3d9744e 352 Gene3D G3DSA:3.30.390.60 138 240 3.6E-33 T 31-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily DY252_01830 5ce8a8721b2e7fbbaf601fa3e3d9744e 352 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 14 350 3.9E-92 T 31-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 DY252_07390 2c2606ba7ee5152757b9b4412242a444 226 SUPERFAMILY SSF50199 35 157 2.22E-16 T 31-10-2018 DY252_07390 2c2606ba7ee5152757b9b4412242a444 226 Gene3D G3DSA:2.40.50.90 34 166 1.5E-9 T 31-10-2018 IPR035437 SNase-like, OB-fold superfamily DY252_19935 8f6a016778f893346ab3c51db3973937 281 Pfam PF02548 Ketopantoate hydroxymethyltransferase 11 265 1.6E-107 T 31-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DY252_19935 8f6a016778f893346ab3c51db3973937 281 PIRSF PIRSF000388 1 273 2.2E-108 T 31-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DY252_19935 8f6a016778f893346ab3c51db3973937 281 Gene3D G3DSA:3.20.20.60 10 279 4.1E-104 T 31-10-2018 DY252_19935 8f6a016778f893346ab3c51db3973937 281 SUPERFAMILY SSF51621 11 270 3.36E-100 T 31-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DY252_19935 8f6a016778f893346ab3c51db3973937 281 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 10 270 7.2E-99 T 31-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DY252_19935 8f6a016778f893346ab3c51db3973937 281 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 11 270 41.021 T 31-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DY252_02100 1bfc1ae9cbc970167658b53306b099b8 394 SMART SM00448 9 122 6.7E-13 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_02100 1bfc1ae9cbc970167658b53306b099b8 394 SMART SM00052 136 381 5.2E-24 T 31-10-2018 IPR001633 EAL domain DY252_02100 1bfc1ae9cbc970167658b53306b099b8 394 SUPERFAMILY SSF141868 145 386 5.1E-44 T 31-10-2018 IPR035919 EAL domain superfamily DY252_02100 1bfc1ae9cbc970167658b53306b099b8 394 Pfam PF00563 EAL domain 144 375 3.4E-38 T 31-10-2018 IPR001633 EAL domain DY252_02100 1bfc1ae9cbc970167658b53306b099b8 394 SUPERFAMILY SSF52172 9 133 4.98E-22 T 31-10-2018 IPR011006 CheY-like superfamily DY252_02100 1bfc1ae9cbc970167658b53306b099b8 394 Gene3D G3DSA:3.20.20.450 141 388 3.4E-46 T 31-10-2018 IPR035919 EAL domain superfamily DY252_02100 1bfc1ae9cbc970167658b53306b099b8 394 Gene3D G3DSA:3.40.50.2300 2 134 3.7E-22 T 31-10-2018 DY252_02100 1bfc1ae9cbc970167658b53306b099b8 394 Pfam PF00072 Response regulator receiver domain 11 122 1.7E-15 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_00270 9b8fbc5278831efed467f7adebf6d7ec 155 Gene3D G3DSA:3.40.960.10 20 151 2.3E-45 T 31-10-2018 DY252_00270 9b8fbc5278831efed467f7adebf6d7ec 155 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 118 9.5E-43 T 31-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 DY252_00270 9b8fbc5278831efed467f7adebf6d7ec 155 Pfam PF03852 DNA mismatch endonuclease Vsr 1 74 1.6E-30 T 31-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 DY252_00270 9b8fbc5278831efed467f7adebf6d7ec 155 PIRSF PIRSF018267 1 145 6.7E-54 T 31-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 DY252_00270 9b8fbc5278831efed467f7adebf6d7ec 155 SUPERFAMILY SSF52980 1 124 1.93E-51 T 31-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DY252_16995 8de31e62f78e257dd31e314f2c14eca5 189 SUPERFAMILY SSF52540 5 147 4.92E-11 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_16995 8de31e62f78e257dd31e314f2c14eca5 189 Pfam PF13207 AAA domain 14 144 9.6E-19 T 31-10-2018 DY252_16995 8de31e62f78e257dd31e314f2c14eca5 189 Gene3D G3DSA:3.40.50.300 6 185 9.3E-39 T 31-10-2018 DY252_16160 fe33a28cd2502273545b5be62fedaec7 355 SUPERFAMILY SSF101821 77 190 1.68E-29 T 31-10-2018 DY252_16160 fe33a28cd2502273545b5be62fedaec7 355 Pfam PF05343 M42 glutamyl aminopeptidase 52 341 3.9E-69 T 31-10-2018 IPR008007 Peptidase M42 DY252_16160 fe33a28cd2502273545b5be62fedaec7 355 TIGRFAM TIGR03106 trio_M42_hydro: hydrolase, peptidase M42 family 7 349 1.5E-158 T 31-10-2018 IPR017537 Peptidase M42, hydrolase DY252_16160 fe33a28cd2502273545b5be62fedaec7 355 Gene3D G3DSA:2.40.30.40 80 175 1.5E-85 T 31-10-2018 IPR023367 Peptidase M42, domain 2 DY252_16160 fe33a28cd2502273545b5be62fedaec7 355 PIRSF PIRSF001123 9 314 4.7E-33 T 31-10-2018 IPR008007 Peptidase M42 DY252_16160 fe33a28cd2502273545b5be62fedaec7 355 Gene3D G3DSA:3.40.630.10 18 346 1.5E-85 T 31-10-2018 DY252_16160 fe33a28cd2502273545b5be62fedaec7 355 SUPERFAMILY SSF53187 12 348 4.28E-46 T 31-10-2018 DY252_15580 f5d0c38c7adeee2364af49988c10b127 507 SUPERFAMILY SSF52540 246 489 8.8E-45 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_15580 f5d0c38c7adeee2364af49988c10b127 507 SMART SM00382 289 490 1.1E-5 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_15580 f5d0c38c7adeee2364af49988c10b127 507 SMART SM00382 29 219 4.4E-9 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_15580 f5d0c38c7adeee2364af49988c10b127 507 Pfam PF00005 ABC transporter 20 171 1.2E-27 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_15580 f5d0c38c7adeee2364af49988c10b127 507 Gene3D G3DSA:3.40.50.300 1 228 3.3E-54 T 31-10-2018 DY252_15580 f5d0c38c7adeee2364af49988c10b127 507 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_15580 f5d0c38c7adeee2364af49988c10b127 507 Pfam PF00005 ABC transporter 280 436 3.5E-18 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_15580 f5d0c38c7adeee2364af49988c10b127 507 Gene3D G3DSA:3.40.50.300 245 505 9.0E-44 T 31-10-2018 DY252_15580 f5d0c38c7adeee2364af49988c10b127 507 SUPERFAMILY SSF52540 3 222 3.52E-53 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_14035 4b57bcdcd704053f79d08bea0b506082 263 Gene3D G3DSA:3.40.50.80 120 263 1.1E-47 T 31-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DY252_14035 4b57bcdcd704053f79d08bea0b506082 263 Pfam PF04954 Siderophore-interacting protein 126 245 1.3E-32 T 31-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain DY252_14035 4b57bcdcd704053f79d08bea0b506082 263 Pfam PF08021 Siderophore-interacting FAD-binding domain 54 117 2.2E-15 T 31-10-2018 IPR013113 FAD-binding 9, siderophore-interacting DY252_14035 4b57bcdcd704053f79d08bea0b506082 263 SUPERFAMILY SSF63380 7 124 9.14E-14 T 31-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DY252_14035 4b57bcdcd704053f79d08bea0b506082 263 Gene3D G3DSA:2.40.30.10 1 119 1.6E-33 T 31-10-2018 DY252_06305 4051afb9a491981318cb99a3245c425a 245 PRINTS PR01805 VacJ lipoprotein signature 18 31 2.0E-21 T 31-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DY252_06305 4051afb9a491981318cb99a3245c425a 245 PRINTS PR01805 VacJ lipoprotein signature 35 51 2.0E-21 T 31-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DY252_06305 4051afb9a491981318cb99a3245c425a 245 PRINTS PR01805 VacJ lipoprotein signature 86 103 2.0E-21 T 31-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DY252_06305 4051afb9a491981318cb99a3245c425a 245 PRINTS PR01805 VacJ lipoprotein signature 122 139 2.0E-21 T 31-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DY252_06305 4051afb9a491981318cb99a3245c425a 245 Pfam PF04333 MlaA lipoprotein 17 214 2.6E-65 T 31-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DY252_03165 5c8a82c0b9ffcd2ed16bdc3cab04487c 150 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 47 84 - T 31-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DY252_03165 5c8a82c0b9ffcd2ed16bdc3cab04487c 150 SUPERFAMILY SSF53927 1 132 2.83E-43 T 31-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DY252_03165 5c8a82c0b9ffcd2ed16bdc3cab04487c 150 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 95 9.0E-24 T 31-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DY252_03165 5c8a82c0b9ffcd2ed16bdc3cab04487c 150 Gene3D G3DSA:3.40.140.10 1 150 5.3E-61 T 31-10-2018 DY252_11180 538dbe4ae253d24864ffc9bc17fec5d0 285 SUPERFAMILY SSF52821 2 153 2.75E-43 T 31-10-2018 IPR036873 Rhodanese-like domain superfamily DY252_11180 538dbe4ae253d24864ffc9bc17fec5d0 285 Gene3D G3DSA:3.40.250.10 3 154 1.2E-49 T 31-10-2018 IPR036873 Rhodanese-like domain superfamily DY252_11180 538dbe4ae253d24864ffc9bc17fec5d0 285 SUPERFAMILY SSF52821 161 284 4.45E-36 T 31-10-2018 IPR036873 Rhodanese-like domain superfamily DY252_11180 538dbe4ae253d24864ffc9bc17fec5d0 285 SMART SM00450 159 278 4.4E-17 T 31-10-2018 IPR001763 Rhodanese-like domain DY252_11180 538dbe4ae253d24864ffc9bc17fec5d0 285 SMART SM00450 10 136 4.4E-22 T 31-10-2018 IPR001763 Rhodanese-like domain DY252_11180 538dbe4ae253d24864ffc9bc17fec5d0 285 Gene3D G3DSA:3.40.250.10 155 281 6.0E-42 T 31-10-2018 IPR036873 Rhodanese-like domain superfamily DY252_11180 538dbe4ae253d24864ffc9bc17fec5d0 285 ProSitePatterns PS00380 Rhodanese signature 1. 44 55 - T 31-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 DY252_11180 538dbe4ae253d24864ffc9bc17fec5d0 285 ProSitePatterns PS00683 Rhodanese C-terminal signature. 262 272 - T 31-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 DY252_11180 538dbe4ae253d24864ffc9bc17fec5d0 285 Pfam PF00581 Rhodanese-like domain 162 273 8.9E-12 T 31-10-2018 IPR001763 Rhodanese-like domain DY252_11180 538dbe4ae253d24864ffc9bc17fec5d0 285 Pfam PF00581 Rhodanese-like domain 11 132 1.8E-15 T 31-10-2018 IPR001763 Rhodanese-like domain DY252_19350 0bd5ffdfdc4f549237ce38cf83e5bd28 437 Gene3D G3DSA:3.40.50.2300 166 400 5.3E-79 T 31-10-2018 DY252_19350 0bd5ffdfdc4f549237ce38cf83e5bd28 437 Gene3D G3DSA:3.40.50.2300 59 388 5.3E-79 T 31-10-2018 DY252_19350 0bd5ffdfdc4f549237ce38cf83e5bd28 437 Pfam PF13458 Periplasmic binding protein 38 391 5.9E-41 T 31-10-2018 IPR028081 Leucine-binding protein domain DY252_19350 0bd5ffdfdc4f549237ce38cf83e5bd28 437 SUPERFAMILY SSF53822 38 396 3.53E-50 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_00420 d28d265added16637969f769cc973f01 818 Gene3D G3DSA:3.30.70.100 70 140 2.0E-15 T 31-10-2018 DY252_00420 d28d265added16637969f769cc973f01 818 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 501 507 - T 31-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DY252_00420 d28d265added16637969f769cc973f01 818 Gene3D G3DSA:3.30.70.100 1 69 5.3E-14 T 31-10-2018 DY252_00420 d28d265added16637969f769cc973f01 818 SUPERFAMILY SSF56784 497 806 7.15E-59 T 31-10-2018 IPR036412 HAD-like superfamily DY252_00420 d28d265added16637969f769cc973f01 818 ProSitePatterns PS01047 Heavy-metal-associated domain. 78 107 - T 31-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DY252_00420 d28d265added16637969f769cc973f01 818 Gene3D G3DSA:2.70.150.20 291 402 8.3E-42 T 31-10-2018 DY252_00420 d28d265added16637969f769cc973f01 818 Pfam PF00702 haloacid dehalogenase-like hydrolase 496 713 2.5E-45 T 31-10-2018 DY252_00420 d28d265added16637969f769cc973f01 818 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 212 809 1.8E-179 T 31-10-2018 DY252_00420 d28d265added16637969f769cc973f01 818 Pfam PF00403 Heavy-metal-associated domain 75 131 1.4E-9 T 31-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DY252_00420 d28d265added16637969f769cc973f01 818 Pfam PF00403 Heavy-metal-associated domain 10 67 9.2E-11 T 31-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DY252_00420 d28d265added16637969f769cc973f01 818 SUPERFAMILY SSF81653 302 397 3.92E-30 T 31-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DY252_00420 d28d265added16637969f769cc973f01 818 Gene3D G3DSA:3.40.50.1000 480 751 5.8E-91 T 31-10-2018 IPR023214 HAD superfamily DY252_00420 d28d265added16637969f769cc973f01 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 722 734 6.0E-29 T 31-10-2018 DY252_00420 d28d265added16637969f769cc973f01 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 699 718 6.0E-29 T 31-10-2018 DY252_00420 d28d265added16637969f769cc973f01 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 347 361 6.0E-29 T 31-10-2018 DY252_00420 d28d265added16637969f769cc973f01 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 624 635 6.0E-29 T 31-10-2018 DY252_00420 d28d265added16637969f769cc973f01 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 499 513 6.0E-29 T 31-10-2018 DY252_00420 d28d265added16637969f769cc973f01 818 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 646 656 6.0E-29 T 31-10-2018 DY252_00420 d28d265added16637969f769cc973f01 818 SUPERFAMILY SSF81665 264 781 7.06E-11 T 31-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DY252_00420 d28d265added16637969f769cc973f01 818 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 269 777 8.7E-90 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_00420 d28d265added16637969f769cc973f01 818 SUPERFAMILY SSF55008 3 70 6.02E-14 T 31-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DY252_00420 d28d265added16637969f769cc973f01 818 PRINTS PR00941 Cadmium-transporting ATPase signature 302 318 1.4E-7 T 31-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DY252_00420 d28d265added16637969f769cc973f01 818 PRINTS PR00941 Cadmium-transporting ATPase signature 9 18 1.4E-7 T 31-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DY252_00420 d28d265added16637969f769cc973f01 818 PRINTS PR00941 Cadmium-transporting ATPase signature 363 379 1.4E-7 T 31-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DY252_00420 d28d265added16637969f769cc973f01 818 PRINTS PR00941 Cadmium-transporting ATPase signature 382 396 1.4E-7 T 31-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DY252_00420 d28d265added16637969f769cc973f01 818 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 230 808 9.2E-190 T 31-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DY252_00420 d28d265added16637969f769cc973f01 818 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 74 135 1.9E-12 T 31-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 DY252_00420 d28d265added16637969f769cc973f01 818 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 7 67 1.7E-9 T 31-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 DY252_00420 d28d265added16637969f769cc973f01 818 Pfam PF00122 E1-E2 ATPase 299 478 7.2E-57 T 31-10-2018 DY252_00420 d28d265added16637969f769cc973f01 818 Gene3D G3DSA:3.40.1110.10 510 631 5.8E-91 T 31-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DY252_00420 d28d265added16637969f769cc973f01 818 SUPERFAMILY SSF55008 73 141 1.23E-15 T 31-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DY252_09260 868b91bd0603e8ba7ecbdf4c314c7301 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 44 64 2.5E-7 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_09260 868b91bd0603e8ba7ecbdf4c314c7301 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 66 82 2.5E-7 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_09260 868b91bd0603e8ba7ecbdf4c314c7301 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 92 108 2.5E-7 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_09260 868b91bd0603e8ba7ecbdf4c314c7301 271 Gene3D G3DSA:3.40.190.80 164 263 7.8E-32 T 31-10-2018 DY252_09260 868b91bd0603e8ba7ecbdf4c314c7301 271 Pfam PF00459 Inositol monophosphatase family 14 250 6.0E-52 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_09260 868b91bd0603e8ba7ecbdf4c314c7301 271 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 92 105 - T 31-10-2018 IPR020583 Inositol monophosphatase, metal-binding site DY252_09260 868b91bd0603e8ba7ecbdf4c314c7301 271 SUPERFAMILY SSF56655 12 261 2.88E-70 T 31-10-2018 DY252_09260 868b91bd0603e8ba7ecbdf4c314c7301 271 Gene3D G3DSA:3.30.540.10 10 163 9.1E-43 T 31-10-2018 DY252_09260 868b91bd0603e8ba7ecbdf4c314c7301 271 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 12 263 39.716 T 31-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 DY252_09260 868b91bd0603e8ba7ecbdf4c314c7301 271 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 15 261 1.2E-86 T 31-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 DY252_03270 907bade45fa76009bf96b1317306ae26 570 SUPERFAMILY SSF51556 132 570 3.24E-201 T 31-10-2018 IPR032466 Metal-dependent hydrolase DY252_03270 907bade45fa76009bf96b1317306ae26 570 ProSitePatterns PS01120 Urease nickel ligands signature. 129 142 - T 31-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_03270 907bade45fa76009bf96b1317306ae26 570 Gene3D G3DSA:3.20.20.140 131 551 1.0E-302 T 31-10-2018 DY252_03270 907bade45fa76009bf96b1317306ae26 570 SUPERFAMILY SSF51338 424 480 6.17E-6 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_03270 907bade45fa76009bf96b1317306ae26 570 Pfam PF01979 Amidohydrolase family 127 457 1.4E-81 T 31-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DY252_03270 907bade45fa76009bf96b1317306ae26 570 ProSitePatterns PS00145 Urease active site. 319 335 - T 31-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_03270 907bade45fa76009bf96b1317306ae26 570 Gene3D G3DSA:2.30.40.10 3 483 1.0E-302 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_03270 907bade45fa76009bf96b1317306ae26 570 SUPERFAMILY SSF51338 4 179 1.81E-64 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_03270 907bade45fa76009bf96b1317306ae26 570 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 336 352 2.2E-33 T 31-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_03270 907bade45fa76009bf96b1317306ae26 570 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 430 443 2.2E-33 T 31-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_03270 907bade45fa76009bf96b1317306ae26 570 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 404 419 2.2E-33 T 31-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_03270 907bade45fa76009bf96b1317306ae26 570 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 297 314 2.2E-33 T 31-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_03270 907bade45fa76009bf96b1317306ae26 570 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 121 3.3E-56 T 31-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_03270 907bade45fa76009bf96b1317306ae26 570 Hamap MF_01953 Urease subunit alpha [ureC]. 3 570 57.907 T 31-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_03270 907bade45fa76009bf96b1317306ae26 570 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 570 7.5E-301 T 31-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_01815 8b80f4507cd74f86d0213457c010eb88 226 SMART SM00418 9 88 9.0E-14 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_01815 8b80f4507cd74f86d0213457c010eb88 226 Pfam PF12840 Helix-turn-helix domain 9 68 1.6E-12 T 31-10-2018 DY252_01815 8b80f4507cd74f86d0213457c010eb88 226 Gene3D G3DSA:1.10.10.10 2 97 6.4E-17 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_01815 8b80f4507cd74f86d0213457c010eb88 226 SUPERFAMILY SSF46785 5 119 2.63E-19 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_08855 405cba4be0193a35011c522ea804ce83 135 Gene3D G3DSA:2.170.150.70 6 118 2.7E-15 T 31-10-2018 DY252_08855 405cba4be0193a35011c522ea804ce83 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 113 2.8E-20 T 31-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 DY252_08855 405cba4be0193a35011c522ea804ce83 135 SUPERFAMILY SSF51316 3 134 1.46E-40 T 31-10-2018 IPR011057 Mss4-like superfamily DY252_09730 3153568d8358ec95f4450c9840188f13 168 Gene3D G3DSA:3.40.630.30 1 164 2.6E-48 T 31-10-2018 DY252_09730 3153568d8358ec95f4450c9840188f13 168 SUPERFAMILY SSF55729 1 144 2.57E-28 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_09730 3153568d8358ec95f4450c9840188f13 168 Pfam PF13527 Acetyltransferase (GNAT) domain 3 128 1.2E-11 T 31-10-2018 DY252_10295 4cb7d972e6b2fb8fe2e240d6649c8e2c 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.7E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_10295 4cb7d972e6b2fb8fe2e240d6649c8e2c 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.7E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_10295 4cb7d972e6b2fb8fe2e240d6649c8e2c 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.7E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_10295 4cb7d972e6b2fb8fe2e240d6649c8e2c 291 SUPERFAMILY SSF53850 84 287 1.76E-21 T 31-10-2018 DY252_10295 4cb7d972e6b2fb8fe2e240d6649c8e2c 291 SUPERFAMILY SSF46785 4 113 1.97E-23 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_10295 4cb7d972e6b2fb8fe2e240d6649c8e2c 291 Pfam PF03466 LysR substrate binding domain 89 287 1.2E-21 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_10295 4cb7d972e6b2fb8fe2e240d6649c8e2c 291 Gene3D G3DSA:3.40.190.10 97 267 8.8E-34 T 31-10-2018 DY252_10295 4cb7d972e6b2fb8fe2e240d6649c8e2c 291 Gene3D G3DSA:1.10.10.10 4 92 1.2E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_10295 4cb7d972e6b2fb8fe2e240d6649c8e2c 291 Gene3D G3DSA:3.40.190.10 163 262 8.8E-34 T 31-10-2018 DY252_10295 4cb7d972e6b2fb8fe2e240d6649c8e2c 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 5.8E-18 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_06345 ddf1389df5bfb184a251952ffbf5bc49 373 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 28 364 2.1E-87 T 31-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DY252_06345 ddf1389df5bfb184a251952ffbf5bc49 373 Gene3D G3DSA:3.40.50.2000 11 361 4.1E-102 T 31-10-2018 DY252_06345 ddf1389df5bfb184a251952ffbf5bc49 373 Gene3D G3DSA:3.40.50.2000 190 351 4.1E-102 T 31-10-2018 DY252_06345 ddf1389df5bfb184a251952ffbf5bc49 373 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 6 365 1.2E-79 T 31-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 DY252_06345 ddf1389df5bfb184a251952ffbf5bc49 373 SUPERFAMILY SSF53756 5 366 3.14E-90 T 31-10-2018 DY252_17340 aeb5b472dbf38b21a8d3b4b65099e188 179 Pfam PF13302 Acetyltransferase (GNAT) domain 20 159 2.0E-24 T 31-10-2018 IPR000182 GNAT domain DY252_17340 aeb5b472dbf38b21a8d3b4b65099e188 179 Gene3D G3DSA:3.40.630.30 2 172 1.0E-34 T 31-10-2018 DY252_17340 aeb5b472dbf38b21a8d3b4b65099e188 179 SUPERFAMILY SSF55729 14 166 5.23E-32 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_02275 9b0bf124d4cb6122b445c9b60ddf4b1a 563 Gene3D G3DSA:3.40.50.12780 15 455 7.3E-123 T 31-10-2018 DY252_02275 9b0bf124d4cb6122b445c9b60ddf4b1a 563 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 544 2.4E-18 T 31-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DY252_02275 9b0bf124d4cb6122b445c9b60ddf4b1a 563 Gene3D G3DSA:3.30.300.310 456 560 7.3E-25 T 31-10-2018 DY252_02275 9b0bf124d4cb6122b445c9b60ddf4b1a 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 210 221 - T 31-10-2018 IPR020845 AMP-binding, conserved site DY252_02275 9b0bf124d4cb6122b445c9b60ddf4b1a 563 Pfam PF00501 AMP-binding enzyme 31 458 1.6E-106 T 31-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DY252_02275 9b0bf124d4cb6122b445c9b60ddf4b1a 563 SUPERFAMILY SSF56801 18 554 4.19E-146 T 31-10-2018 DY252_14785 5515862b38e08ccbc2c54a80d450cc17 212 Pfam PF00326 Prolyl oligopeptidase family 150 206 2.2E-6 T 31-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DY252_14785 5515862b38e08ccbc2c54a80d450cc17 212 Gene3D G3DSA:3.40.50.1820 2 211 2.0E-60 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_14785 5515862b38e08ccbc2c54a80d450cc17 212 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 40 136 5.8E-7 T 31-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 DY252_14785 5515862b38e08ccbc2c54a80d450cc17 212 SUPERFAMILY SSF53474 4 209 7.78E-47 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_14590 35ca91248eec02c61bc3900ec529e675 356 SUPERFAMILY SSF141868 114 349 4.84E-63 T 31-10-2018 IPR035919 EAL domain superfamily DY252_14590 35ca91248eec02c61bc3900ec529e675 356 Gene3D G3DSA:3.20.20.450 113 354 1.1E-65 T 31-10-2018 IPR035919 EAL domain superfamily DY252_14590 35ca91248eec02c61bc3900ec529e675 356 Pfam PF00563 EAL domain 116 346 6.5E-56 T 31-10-2018 IPR001633 EAL domain DY252_14590 35ca91248eec02c61bc3900ec529e675 356 SMART SM00052 98 351 2.0E-38 T 31-10-2018 IPR001633 EAL domain DY252_09515 e62080f87232e0a56905f4cd114d717d 715 PIRSF PIRSF015589 2 704 5.8E-265 T 31-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 DY252_09515 e62080f87232e0a56905f4cd114d717d 715 Gene3D G3DSA:3.30.870.10 508 693 2.1E-66 T 31-10-2018 DY252_09515 e62080f87232e0a56905f4cd114d717d 715 Gene3D G3DSA:3.30.870.10 329 507 2.9E-68 T 31-10-2018 DY252_09515 e62080f87232e0a56905f4cd114d717d 715 Hamap MF_00347 Polyphosphate kinase [ppk]. 17 694 27.559 T 31-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 DY252_09515 e62080f87232e0a56905f4cd114d717d 715 SUPERFAMILY SSF56024 328 504 1.3E-53 T 31-10-2018 DY252_09515 e62080f87232e0a56905f4cd114d717d 715 SUPERFAMILY SSF56024 508 690 3.36E-68 T 31-10-2018 DY252_09515 e62080f87232e0a56905f4cd114d717d 715 SUPERFAMILY SSF140356 17 121 4.19E-38 T 31-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 DY252_09515 e62080f87232e0a56905f4cd114d717d 715 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 19 691 2.9E-283 T 31-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 DY252_09515 e62080f87232e0a56905f4cd114d717d 715 Pfam PF13090 Polyphosphate kinase C-terminal domain 338 689 3.4E-152 T 31-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 DY252_09515 e62080f87232e0a56905f4cd114d717d 715 SUPERFAMILY SSF143724 122 315 4.32E-57 T 31-10-2018 DY252_09515 e62080f87232e0a56905f4cd114d717d 715 Pfam PF02503 Polyphosphate kinase middle domain 134 328 3.9E-55 T 31-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 DY252_09515 e62080f87232e0a56905f4cd114d717d 715 Pfam PF13089 Polyphosphate kinase N-terminal domain 20 124 1.2E-38 T 31-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 DY252_09515 e62080f87232e0a56905f4cd114d717d 715 Gene3D G3DSA:3.30.1840.10 13 316 3.6E-98 T 31-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 DY252_13245 7c3a90a10d41a6e77ea70a5fd1593538 190 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 1.9E-12 T 31-10-2018 DY252_13245 7c3a90a10d41a6e77ea70a5fd1593538 190 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.9E-12 T 31-10-2018 DY252_13245 7c3a90a10d41a6e77ea70a5fd1593538 190 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.9E-12 T 31-10-2018 DY252_13245 7c3a90a10d41a6e77ea70a5fd1593538 190 Gene3D G3DSA:3.40.50.880 2 188 4.2E-65 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_13245 7c3a90a10d41a6e77ea70a5fd1593538 190 Pfam PF00117 Glutamine amidotransferase class-I 3 185 3.0E-53 T 31-10-2018 IPR017926 Glutamine amidotransferase DY252_13245 7c3a90a10d41a6e77ea70a5fd1593538 190 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 6.0E-7 T 31-10-2018 DY252_13245 7c3a90a10d41a6e77ea70a5fd1593538 190 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 6.0E-7 T 31-10-2018 DY252_13245 7c3a90a10d41a6e77ea70a5fd1593538 190 SUPERFAMILY SSF52317 1 187 3.59E-57 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_13245 7c3a90a10d41a6e77ea70a5fd1593538 190 PRINTS PR00097 Anthranilate synthase component II signature 74 85 8.7E-32 T 31-10-2018 DY252_13245 7c3a90a10d41a6e77ea70a5fd1593538 190 PRINTS PR00097 Anthranilate synthase component II signature 119 131 8.7E-32 T 31-10-2018 DY252_13245 7c3a90a10d41a6e77ea70a5fd1593538 190 PRINTS PR00097 Anthranilate synthase component II signature 99 107 8.7E-32 T 31-10-2018 DY252_13245 7c3a90a10d41a6e77ea70a5fd1593538 190 PRINTS PR00097 Anthranilate synthase component II signature 47 56 8.7E-32 T 31-10-2018 DY252_13245 7c3a90a10d41a6e77ea70a5fd1593538 190 PRINTS PR00097 Anthranilate synthase component II signature 2 16 8.7E-32 T 31-10-2018 DY252_13245 7c3a90a10d41a6e77ea70a5fd1593538 190 PRINTS PR00097 Anthranilate synthase component II signature 164 177 8.7E-32 T 31-10-2018 DY252_13245 7c3a90a10d41a6e77ea70a5fd1593538 190 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 6.4E-73 T 31-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DY252_04290 b11805e95d28d94563a072046707a4da 735 Gene3D G3DSA:3.40.30.10 615 723 3.4E-12 T 31-10-2018 DY252_04290 b11805e95d28d94563a072046707a4da 735 Pfam PF11412 Disulphide bond corrector protein DsbC 55 160 6.9E-21 T 31-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain DY252_04290 b11805e95d28d94563a072046707a4da 735 SUPERFAMILY SSF52833 613 721 4.41E-15 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_04290 b11805e95d28d94563a072046707a4da 735 Pfam PF13899 Thioredoxin-like 614 700 1.1E-14 T 31-10-2018 DY252_04290 b11805e95d28d94563a072046707a4da 735 ProSitePatterns PS00194 Thioredoxin family active site. 633 651 - T 31-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DY252_04290 b11805e95d28d94563a072046707a4da 735 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 324 535 3.1E-7 T 31-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 DY252_20205 20bbae073785426adb4338693bc80beb 134 Gene3D G3DSA:2.60.15.10 1 133 1.4E-38 T 31-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20205 20bbae073785426adb4338693bc80beb 134 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 20.15 T 31-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20205 20bbae073785426adb4338693bc80beb 134 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 2.0E-27 T 31-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20205 20bbae073785426adb4338693bc80beb 134 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 7 84 1.6E-25 T 31-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20205 20bbae073785426adb4338693bc80beb 134 SUPERFAMILY SSF51344 7 85 1.57E-22 T 31-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20205 20bbae073785426adb4338693bc80beb 134 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 132 1.6E-34 T 31-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_01105 540c86df6fe3d9f0109d578470cbc939 525 Gene3D G3DSA:3.60.110.10 254 497 3.1E-11 T 31-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DY252_01105 540c86df6fe3d9f0109d578470cbc939 525 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 14 508 19.312 T 31-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 DY252_01105 540c86df6fe3d9f0109d578470cbc939 525 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 68 469 4.5E-92 T 31-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 DY252_01105 540c86df6fe3d9f0109d578470cbc939 525 Pfam PF00795 Carbon-nitrogen hydrolase 279 486 5.4E-19 T 31-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DY252_01105 540c86df6fe3d9f0109d578470cbc939 525 SUPERFAMILY SSF56317 276 491 3.53E-36 T 31-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DY252_18800 ff56bd29f47ada266282913c5d6e9376 387 SUPERFAMILY SSF55347 147 307 8.01E-39 T 31-10-2018 DY252_18800 ff56bd29f47ada266282913c5d6e9376 387 Gene3D G3DSA:3.30.360.10 146 385 1.3E-134 T 31-10-2018 DY252_18800 ff56bd29f47ada266282913c5d6e9376 387 Gene3D G3DSA:3.40.50.720 16 360 1.3E-134 T 31-10-2018 DY252_18800 ff56bd29f47ada266282913c5d6e9376 387 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 11 140 3.8E-21 T 31-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DY252_18800 ff56bd29f47ada266282913c5d6e9376 387 SUPERFAMILY SSF51735 7 172 3.05E-38 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_18800 ff56bd29f47ada266282913c5d6e9376 387 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 153 274 1.5E-10 T 31-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DY252_10360 e815641142aadd063354c8e259c172ad 266 SUPERFAMILY SSF52540 4 233 4.9E-72 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_10360 e815641142aadd063354c8e259c172ad 266 Gene3D G3DSA:3.40.50.300 3 228 1.8E-64 T 31-10-2018 DY252_10360 e815641142aadd063354c8e259c172ad 266 SMART SM00382 33 214 1.0E-16 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_10360 e815641142aadd063354c8e259c172ad 266 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_10360 e815641142aadd063354c8e259c172ad 266 Pfam PF00005 ABC transporter 24 163 5.8E-33 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_18140 557db6b481002b2325b8bd636ef43a29 506 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 5 17 4.9E-29 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_18140 557db6b481002b2325b8bd636ef43a29 506 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 34 46 4.9E-29 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_18140 557db6b481002b2325b8bd636ef43a29 506 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 18 28 4.9E-29 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_18140 557db6b481002b2325b8bd636ef43a29 506 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 352 364 4.9E-29 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_18140 557db6b481002b2325b8bd636ef43a29 506 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 316 322 4.9E-29 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_18140 557db6b481002b2325b8bd636ef43a29 506 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 79 91 4.9E-29 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_18140 557db6b481002b2325b8bd636ef43a29 506 Gene3D G3DSA:3.30.9.10 83 323 9.8E-133 T 31-10-2018 DY252_18140 557db6b481002b2325b8bd636ef43a29 506 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 386 491 1.2E-10 T 31-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_18140 557db6b481002b2325b8bd636ef43a29 506 Pfam PF01266 FAD dependent oxidoreductase 6 326 2.0E-49 T 31-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DY252_18140 557db6b481002b2325b8bd636ef43a29 506 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 357 367 - T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_18140 557db6b481002b2325b8bd636ef43a29 506 Gene3D G3DSA:1.10.8.870 398 467 4.9E-21 T 31-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_18140 557db6b481002b2325b8bd636ef43a29 506 SUPERFAMILY SSF51905 4 301 1.36E-37 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_18140 557db6b481002b2325b8bd636ef43a29 506 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 10 27 - T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_18140 557db6b481002b2325b8bd636ef43a29 506 Gene3D G3DSA:3.50.50.60 6 371 9.8E-133 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_19010 632c03c70f04cbf7a0968c45dcc11844 156 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 8.2E-22 T 31-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DY252_19010 632c03c70f04cbf7a0968c45dcc11844 156 SUPERFAMILY SSF46785 2 62 4.43E-15 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_19010 632c03c70f04cbf7a0968c45dcc11844 156 SUPERFAMILY SSF54909 64 147 2.68E-18 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_19010 632c03c70f04cbf7a0968c45dcc11844 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.0E-13 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_19010 632c03c70f04cbf7a0968c45dcc11844 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.0E-13 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_19010 632c03c70f04cbf7a0968c45dcc11844 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.0E-13 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_19010 632c03c70f04cbf7a0968c45dcc11844 156 SMART SM00344 3 112 2.3E-33 T 31-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DY252_19010 632c03c70f04cbf7a0968c45dcc11844 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 1.4E-15 T 31-10-2018 DY252_19010 632c03c70f04cbf7a0968c45dcc11844 156 Gene3D G3DSA:1.10.10.10 4 54 1.9E-21 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_19010 632c03c70f04cbf7a0968c45dcc11844 156 Gene3D G3DSA:3.30.70.920 56 139 6.5E-24 T 31-10-2018 DY252_07275 7a1713e4fca8629b215c66bfc568b03a 448 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 186 320 5.6E-29 T 31-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DY252_07275 7a1713e4fca8629b215c66bfc568b03a 448 SUPERFAMILY SSF69742 18 172 4.45E-36 T 31-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DY252_07275 7a1713e4fca8629b215c66bfc568b03a 448 Gene3D G3DSA:3.30.460.30 16 172 5.0E-44 T 31-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DY252_07275 7a1713e4fca8629b215c66bfc568b03a 448 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 21 170 1.2E-36 T 31-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DY252_07275 7a1713e4fca8629b215c66bfc568b03a 448 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 19 413 4.9E-94 T 31-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DY252_07275 7a1713e4fca8629b215c66bfc568b03a 448 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 334 427 1.5E-12 T 31-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DY252_07275 7a1713e4fca8629b215c66bfc568b03a 448 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 17 426 24.766 T 31-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DY252_07275 7a1713e4fca8629b215c66bfc568b03a 448 PIRSF PIRSF000445 16 436 3.8E-114 T 31-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DY252_07275 7a1713e4fca8629b215c66bfc568b03a 448 SUPERFAMILY SSF51735 175 328 3.05E-24 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_07275 7a1713e4fca8629b215c66bfc568b03a 448 SUPERFAMILY SSF69075 332 415 3.01E-12 T 31-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DY252_07275 7a1713e4fca8629b215c66bfc568b03a 448 Gene3D G3DSA:3.40.50.720 175 325 8.1E-33 T 31-10-2018 DY252_15090 97072eea570a63691656a6b325f35e85 536 SUPERFAMILY SSF52096 277 536 3.46E-88 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_15090 97072eea570a63691656a6b325f35e85 536 Gene3D G3DSA:3.90.226.10 275 536 1.4E-105 T 31-10-2018 DY252_15090 97072eea570a63691656a6b325f35e85 536 Gene3D G3DSA:3.90.226.10 1 273 1.9E-101 T 31-10-2018 DY252_15090 97072eea570a63691656a6b325f35e85 536 SUPERFAMILY SSF52096 23 270 7.47E-72 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_15090 97072eea570a63691656a6b325f35e85 536 Pfam PF01039 Carboxyl transferase domain 49 527 1.2E-157 T 31-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 DY252_07090 ae4d87af367234360c868233c7d0888f 311 Pfam PF03466 LysR substrate binding domain 89 293 6.4E-30 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_07090 ae4d87af367234360c868233c7d0888f 311 Gene3D G3DSA:3.40.190.10 101 289 1.9E-43 T 31-10-2018 DY252_07090 ae4d87af367234360c868233c7d0888f 311 Gene3D G3DSA:3.40.190.10 161 261 1.9E-43 T 31-10-2018 DY252_07090 ae4d87af367234360c868233c7d0888f 311 SUPERFAMILY SSF46785 4 87 2.61E-19 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_07090 ae4d87af367234360c868233c7d0888f 311 SUPERFAMILY SSF53850 93 297 1.86E-33 T 31-10-2018 DY252_07090 ae4d87af367234360c868233c7d0888f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.3E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_07090 ae4d87af367234360c868233c7d0888f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.3E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_07090 ae4d87af367234360c868233c7d0888f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.3E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_07090 ae4d87af367234360c868233c7d0888f 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.6E-16 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_07090 ae4d87af367234360c868233c7d0888f 311 Gene3D G3DSA:1.10.10.10 6 95 1.1E-19 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_08015 3d2ea71e5fd893e2711ec0e539a0cc70 343 Gene3D G3DSA:3.40.50.2300 28 306 9.6E-94 T 31-10-2018 DY252_08015 3d2ea71e5fd893e2711ec0e539a0cc70 343 Pfam PF13407 Periplasmic binding protein domain 27 283 1.7E-61 T 31-10-2018 IPR025997 Periplasmic binding protein DY252_08015 3d2ea71e5fd893e2711ec0e539a0cc70 343 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 27 328 1.2E-129 T 31-10-2018 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 DY252_08015 3d2ea71e5fd893e2711ec0e539a0cc70 343 SUPERFAMILY SSF53822 24 317 1.18E-69 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_08015 3d2ea71e5fd893e2711ec0e539a0cc70 343 Gene3D G3DSA:3.40.50.2300 127 315 9.6E-94 T 31-10-2018 DY252_01875 a5768c073e34c9c27f5ed3ec6fb50e16 204 Pfam PF01612 3'-5' exonuclease 17 168 3.1E-34 T 31-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DY252_01875 a5768c073e34c9c27f5ed3ec6fb50e16 204 Gene3D G3DSA:3.30.420.10 4 187 1.6E-42 T 31-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DY252_01875 a5768c073e34c9c27f5ed3ec6fb50e16 204 SUPERFAMILY SSF53098 7 191 2.19E-51 T 31-10-2018 IPR012337 Ribonuclease H-like superfamily DY252_01875 a5768c073e34c9c27f5ed3ec6fb50e16 204 SMART SM00474 1 169 3.9E-39 T 31-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DY252_04550 2bfa6322a295f4635d2ca782620b6f0c 416 Pfam PF03773 Predicted permease 16 316 4.7E-57 T 31-10-2018 IPR005524 Predicted permease DUF318 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3727 3745 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 SUPERFAMILY SSF51120 3581 3710 4.19E-23 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 PRINTS PR00313 NodO calcium binding signature 3641 3649 5.5E-7 T 31-10-2018 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 PRINTS PR00313 NodO calcium binding signature 3677 3686 5.5E-7 T 31-10-2018 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 PRINTS PR00313 NodO calcium binding signature 3458 3469 5.5E-7 T 31-10-2018 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 PRINTS PR00313 NodO calcium binding signature 3659 3667 5.5E-7 T 31-10-2018 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Gene3D G3DSA:2.150.10.10 3605 3657 1.2E-7 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Gene3D G3DSA:2.150.10.10 3530 3604 3.4E-7 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Gene3D G3DSA:2.150.10.10 3712 3843 2.1E-20 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Gene3D G3DSA:2.150.10.10 3428 3481 1.4E-10 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Gene3D G3DSA:2.150.10.10 3482 3529 3.1E-7 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Gene3D G3DSA:2.150.10.10 3372 3427 2.1E-5 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Gene3D G3DSA:2.60.40.10 2940 3045 5.1E-5 T 31-10-2018 IPR013783 Immunoglobulin-like fold DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Gene3D G3DSA:2.60.40.10 659 763 6.6E-5 T 31-10-2018 IPR013783 Immunoglobulin-like fold DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3745 3763 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 SUPERFAMILY SSF51120 3687 3804 8.63E-23 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 SUPERFAMILY SSF51120 3374 3512 4.81E-22 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3736 3754 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3694 3711 1.8 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3596 3612 13.0 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3731 3747 0.0062 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3713 3729 0.23 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3677 3693 0.63 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3658 3675 9.4 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3579 3594 2.1 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3389 3405 5.1 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3640 3657 3.1 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3408 3423 0.054 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3497 3513 0.013 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3442 3459 0.1 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3461 3477 5.6 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3424 3441 5.6 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3623 3639 4.0 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3533 3549 0.48 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3748 3764 1.4 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 SMART SM00089 2205 2289 14.0 T 31-10-2018 IPR022409 PKD/Chitinase domain DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 SMART SM00089 1767 1855 14.0 T 31-10-2018 IPR022409 PKD/Chitinase domain DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 SMART SM00089 1665 1749 6.8 T 31-10-2018 IPR022409 PKD/Chitinase domain DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 SMART SM00089 464 546 9.1 T 31-10-2018 IPR022409 PKD/Chitinase domain DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 SMART SM00089 1864 1963 12.0 T 31-10-2018 IPR022409 PKD/Chitinase domain DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 SMART SM00089 2623 2721 9.9 T 31-10-2018 IPR022409 PKD/Chitinase domain DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 SMART SM00089 2745 2827 2.9 T 31-10-2018 IPR022409 PKD/Chitinase domain DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 SMART SM00089 2839 2937 5.0 T 31-10-2018 IPR022409 PKD/Chitinase domain DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 SMART SM00089 2529 2611 13.0 T 31-10-2018 IPR022409 PKD/Chitinase domain DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 SMART SM00089 1322 1410 4.7 T 31-10-2018 IPR022409 PKD/Chitinase domain DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 SMART SM00089 1112 1194 3.8 T 31-10-2018 IPR022409 PKD/Chitinase domain DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 SMART SM00089 1989 2073 3.9 T 31-10-2018 IPR022409 PKD/Chitinase domain DY252_18435 0fe67596d600edaf460853d58a801b2d 3848 Gene3D G3DSA:2.150.10.10 3658 3711 2.5E-9 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_20840 fa72ec7cc04bbec50a56e87f06bca4b3 88 Gene3D G3DSA:3.40.30.10 8 82 4.0E-16 T 31-10-2018 DY252_20840 fa72ec7cc04bbec50a56e87f06bca4b3 88 SUPERFAMILY SSF52833 8 71 2.33E-14 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_20840 fa72ec7cc04bbec50a56e87f06bca4b3 88 Pfam PF00462 Glutaredoxin 9 64 1.5E-13 T 31-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DY252_02730 2fc26f8585bd34c4cad90fd41e9ff120 852 Pfam PF02687 FtsX-like permease family 760 842 3.9E-7 T 31-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DY252_00925 914a1c0b65f313e2872153cfe4b76441 245 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 18 223 1.3E-46 T 31-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DY252_00925 914a1c0b65f313e2872153cfe4b76441 245 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 16 239 8.0E-62 T 31-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 DY252_00925 914a1c0b65f313e2872153cfe4b76441 245 Gene3D G3DSA:3.40.1010.10 13 136 6.9E-31 T 31-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DY252_00925 914a1c0b65f313e2872153cfe4b76441 245 Gene3D G3DSA:3.30.950.10 138 243 1.0E-15 T 31-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DY252_00925 914a1c0b65f313e2872153cfe4b76441 245 PIRSF PIRSF036427 13 245 4.8E-70 T 31-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 DY252_00925 914a1c0b65f313e2872153cfe4b76441 245 SUPERFAMILY SSF53790 14 242 3.14E-48 T 31-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 Gene3D G3DSA:1.10.460.10 140 558 1.1E-168 T 31-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 3 635 1.5E-249 T 31-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 Pfam PF01751 Toprim domain 3 115 3.0E-28 T 31-10-2018 IPR006171 TOPRIM domain DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 SMART SM00437 247 518 6.0E-126 T 31-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 SMART SM00436 106 194 5.9E-45 T 31-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 Gene3D G3DSA:2.70.20.10 186 465 1.1E-168 T 31-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 Gene3D G3DSA:1.10.290.10 255 390 1.1E-168 T 31-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 SUPERFAMILY SSF57783 591 639 1.56E-11 T 31-10-2018 DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 SUPERFAMILY SSF56712 1 609 1.44E-193 T 31-10-2018 IPR023405 DNA topoisomerase, type IA, core domain DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 Pfam PF01131 DNA topoisomerase 130 556 7.4E-130 T 31-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 Pfam PF13368 Topoisomerase C-terminal repeat 727 778 1.1E-17 T 31-10-2018 IPR025589 Topoisomerase C-terminal repeat DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 Pfam PF13368 Topoisomerase C-terminal repeat 658 721 1.3E-9 T 31-10-2018 IPR025589 Topoisomerase C-terminal repeat DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 Pfam PF13368 Topoisomerase C-terminal repeat 785 837 6.9E-15 T 31-10-2018 IPR025589 Topoisomerase C-terminal repeat DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 601 636 1.8E-14 T 31-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 Gene3D G3DSA:3.40.50.140 1 136 2.3E-51 T 31-10-2018 DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 Gene3D G3DSA:3.30.65.10 589 642 1.9E-7 T 31-10-2018 DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 375 391 1.8E-34 T 31-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 297 306 1.8E-34 T 31-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 164 182 1.8E-34 T 31-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 481 495 1.8E-34 T 31-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 75 88 1.8E-34 T 31-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 284 306 - T 31-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 SMART SM00493 1 101 1.2E-31 T 31-10-2018 IPR006171 TOPRIM domain DY252_11625 bc3fce2dbcc85ae59eddff8b8d2175e0 878 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 747 55.86 T 31-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 DY252_01040 452733724f2649a1dd98223dd200127b 464 SUPERFAMILY SSF51412 27 309 1.99E-6 T 31-10-2018 DY252_01040 452733724f2649a1dd98223dd200127b 464 Gene3D G3DSA:3.20.20.70 14 358 7.2E-24 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_17840 e97d33258cd083a4226bca54a8e4a04e 736 SUPERFAMILY SSF50182 541 603 1.01E-10 T 31-10-2018 IPR010920 LSM domain superfamily DY252_17840 e97d33258cd083a4226bca54a8e4a04e 736 Gene3D G3DSA:2.30.30.60 556 605 3.3E-12 T 31-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DY252_17840 e97d33258cd083a4226bca54a8e4a04e 736 Pfam PF00924 Mechanosensitive ion channel 500 698 2.0E-43 T 31-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DY252_17840 e97d33258cd083a4226bca54a8e4a04e 736 SUPERFAMILY SSF82861 448 539 1.83E-12 T 31-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DY252_17840 e97d33258cd083a4226bca54a8e4a04e 736 SUPERFAMILY SSF82689 604 700 4.58E-10 T 31-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DY252_17840 e97d33258cd083a4226bca54a8e4a04e 736 Gene3D G3DSA:3.30.70.100 608 696 4.0E-14 T 31-10-2018 DY252_15880 1433aceea0007717999a881482cbaf01 727 Gene3D G3DSA:1.10.520.10 20 430 1.0E-206 T 31-10-2018 DY252_15880 1433aceea0007717999a881482cbaf01 727 SUPERFAMILY SSF48113 435 726 4.57E-109 T 31-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 DY252_15880 1433aceea0007717999a881482cbaf01 727 Gene3D G3DSA:1.10.420.20 189 397 1.0E-206 T 31-10-2018 DY252_15880 1433aceea0007717999a881482cbaf01 727 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 9 726 0.0 T 31-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DY252_15880 1433aceea0007717999a881482cbaf01 727 Gene3D G3DSA:1.10.420.10 581 702 3.9E-144 T 31-10-2018 DY252_15880 1433aceea0007717999a881482cbaf01 727 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 24 46 1.7E-49 T 31-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DY252_15880 1433aceea0007717999a881482cbaf01 727 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 265 288 1.7E-49 T 31-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DY252_15880 1433aceea0007717999a881482cbaf01 727 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 50 63 1.7E-49 T 31-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DY252_15880 1433aceea0007717999a881482cbaf01 727 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 65 90 1.7E-49 T 31-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DY252_15880 1433aceea0007717999a881482cbaf01 727 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 479 505 1.7E-49 T 31-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DY252_15880 1433aceea0007717999a881482cbaf01 727 Hamap MF_01961 Catalase-peroxidase [katG]. 5 727 39.069 T 31-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DY252_15880 1433aceea0007717999a881482cbaf01 727 SUPERFAMILY SSF48113 16 429 1.02E-140 T 31-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 DY252_15880 1433aceea0007717999a881482cbaf01 727 ProSitePatterns PS00436 Peroxidases active site signature. 88 99 - T 31-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 DY252_15880 1433aceea0007717999a881482cbaf01 727 PRINTS PR00458 Haem peroxidase superfamily signature 148 165 9.0E-13 T 31-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DY252_15880 1433aceea0007717999a881482cbaf01 727 PRINTS PR00458 Haem peroxidase superfamily signature 88 102 9.0E-13 T 31-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DY252_15880 1433aceea0007717999a881482cbaf01 727 PRINTS PR00458 Haem peroxidase superfamily signature 257 272 9.0E-13 T 31-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DY252_15880 1433aceea0007717999a881482cbaf01 727 PRINTS PR00458 Haem peroxidase superfamily signature 166 178 9.0E-13 T 31-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DY252_15880 1433aceea0007717999a881482cbaf01 727 PRINTS PR00458 Haem peroxidase superfamily signature 316 331 9.0E-13 T 31-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DY252_15880 1433aceea0007717999a881482cbaf01 727 Pfam PF00141 Peroxidase 66 395 3.8E-41 T 31-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DY252_15880 1433aceea0007717999a881482cbaf01 727 Pfam PF00141 Peroxidase 403 701 6.2E-39 T 31-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DY252_15880 1433aceea0007717999a881482cbaf01 727 Gene3D G3DSA:1.10.520.10 431 726 3.9E-144 T 31-10-2018 DY252_08215 fa2af8670a59ddbae7f67a3b5d4af2ac 404 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 258 373 5.1E-28 T 31-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DY252_08215 fa2af8670a59ddbae7f67a3b5d4af2ac 404 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 210 2.4E-58 T 31-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DY252_08215 fa2af8670a59ddbae7f67a3b5d4af2ac 404 SUPERFAMILY SSF52540 2 313 2.12E-44 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_08215 fa2af8670a59ddbae7f67a3b5d4af2ac 404 Gene3D G3DSA:3.40.50.300 1 229 4.5E-72 T 31-10-2018 DY252_08215 fa2af8670a59ddbae7f67a3b5d4af2ac 404 SMART SM00833 258 373 2.0E-52 T 31-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DY252_14645 94325a81f5aa2817bce7fa8f423d5df4 398 SUPERFAMILY SSF53822 25 393 7.07E-61 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_14645 94325a81f5aa2817bce7fa8f423d5df4 398 Gene3D G3DSA:3.40.50.2300 150 278 2.5E-61 T 31-10-2018 DY252_14645 94325a81f5aa2817bce7fa8f423d5df4 398 Gene3D G3DSA:3.40.50.2300 28 330 2.5E-61 T 31-10-2018 DY252_14645 94325a81f5aa2817bce7fa8f423d5df4 398 Pfam PF13458 Periplasmic binding protein 26 328 8.8E-34 T 31-10-2018 IPR028081 Leucine-binding protein domain DY252_07745 7472f803b5a4a47282934ae9138b0940 329 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 99 306 2.5E-84 T 31-10-2018 IPR014142 P-type conjugative transfer protein TrbG DY252_07745 7472f803b5a4a47282934ae9138b0940 329 Pfam PF03524 Conjugal transfer protein 98 317 1.4E-63 T 31-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX DY252_07745 7472f803b5a4a47282934ae9138b0940 329 Gene3D G3DSA:2.60.40.2500 221 319 3.4E-9 T 31-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily DY252_13215 8d0b3013e0592b5dc601ff512e889ce0 542 Gene3D G3DSA:3.40.50.880 286 542 9.9E-99 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_13215 8d0b3013e0592b5dc601ff512e889ce0 542 Hamap MF_01227 CTP synthase [pyrG]. 2 539 50.165 T 31-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DY252_13215 8d0b3013e0592b5dc601ff512e889ce0 542 SUPERFAMILY SSF52317 287 538 1.86E-81 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_13215 8d0b3013e0592b5dc601ff512e889ce0 542 Pfam PF00117 Glutamine amidotransferase class-I 299 534 3.5E-57 T 31-10-2018 IPR017926 Glutamine amidotransferase DY252_13215 8d0b3013e0592b5dc601ff512e889ce0 542 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 7.4E-233 T 31-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DY252_13215 8d0b3013e0592b5dc601ff512e889ce0 542 Pfam PF06418 CTP synthase N-terminus 3 263 1.7E-117 T 31-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DY252_13215 8d0b3013e0592b5dc601ff512e889ce0 542 SUPERFAMILY SSF52540 1 268 8.5E-117 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_13215 8d0b3013e0592b5dc601ff512e889ce0 542 Gene3D G3DSA:3.40.50.300 1 283 1.4E-120 T 31-10-2018 DY252_06295 292c8b19a0b12a1d344f0803e1885d09 559 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_06295 292c8b19a0b12a1d344f0803e1885d09 559 Pfam PF00005 ABC transporter 25 195 8.5E-26 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_06295 292c8b19a0b12a1d344f0803e1885d09 559 Gene3D G3DSA:3.40.50.300 4 289 1.8E-77 T 31-10-2018 DY252_06295 292c8b19a0b12a1d344f0803e1885d09 559 Pfam PF12848 ABC transporter 234 301 3.1E-13 T 31-10-2018 IPR032781 ABC-transporter extension domain DY252_06295 292c8b19a0b12a1d344f0803e1885d09 559 Pfam PF00005 ABC transporter 344 477 1.4E-23 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_06295 292c8b19a0b12a1d344f0803e1885d09 559 Gene3D G3DSA:3.40.50.300 291 558 2.8E-69 T 31-10-2018 DY252_06295 292c8b19a0b12a1d344f0803e1885d09 559 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 5 557 3.1E-292 T 31-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 DY252_06295 292c8b19a0b12a1d344f0803e1885d09 559 SUPERFAMILY SSF52540 10 248 8.48E-46 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_06295 292c8b19a0b12a1d344f0803e1885d09 559 SMART SM00382 33 236 2.1E-9 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_06295 292c8b19a0b12a1d344f0803e1885d09 559 SMART SM00382 352 523 9.3E-10 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_06295 292c8b19a0b12a1d344f0803e1885d09 559 SUPERFAMILY SSF52540 310 526 2.58E-45 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_09110 9f0f51f1f8be462a94d7b289d8b2aa21 437 Pfam PF12002 MgsA AAA+ ATPase C terminal 258 422 4.9E-68 T 31-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal DY252_09110 9f0f51f1f8be462a94d7b289d8b2aa21 437 SUPERFAMILY SSF52540 7 217 9.89E-44 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_09110 9f0f51f1f8be462a94d7b289d8b2aa21 437 Gene3D G3DSA:1.20.272.10 231 335 8.6E-45 T 31-10-2018 DY252_09110 9f0f51f1f8be462a94d7b289d8b2aa21 437 Gene3D G3DSA:3.40.50.300 3 161 1.1E-42 T 31-10-2018 DY252_09110 9f0f51f1f8be462a94d7b289d8b2aa21 437 SUPERFAMILY SSF48019 243 427 1.57E-74 T 31-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DY252_09110 9f0f51f1f8be462a94d7b289d8b2aa21 437 Gene3D G3DSA:1.10.3710.10 336 436 7.0E-31 T 31-10-2018 DY252_09110 9f0f51f1f8be462a94d7b289d8b2aa21 437 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 50 158 2.4E-14 T 31-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DY252_09110 9f0f51f1f8be462a94d7b289d8b2aa21 437 SMART SM00382 46 162 2.1E-14 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_09110 9f0f51f1f8be462a94d7b289d8b2aa21 437 Pfam PF16193 AAA C-terminal domain 182 257 3.7E-18 T 31-10-2018 IPR032423 AAA C-terminal domain DY252_13680 bf26b68aed0c4670fd1347e2fec2537a 319 Gene3D G3DSA:3.40.1190.20 1 319 2.5E-103 T 31-10-2018 IPR029056 Ribokinase-like DY252_13680 bf26b68aed0c4670fd1347e2fec2537a 319 Pfam PF00294 pfkB family carbohydrate kinase 3 308 1.2E-69 T 31-10-2018 IPR011611 Carbohydrate kinase PfkB DY252_13680 bf26b68aed0c4670fd1347e2fec2537a 319 SUPERFAMILY SSF53613 2 316 2.81E-84 T 31-10-2018 IPR029056 Ribokinase-like DY252_01905 d6cc0f3228b9e89f780449c1afbcf99e 198 SUPERFAMILY SSF69754 1 102 1.05E-26 T 31-10-2018 IPR036567 Ribosome hibernation promotion factor-like DY252_01905 d6cc0f3228b9e89f780449c1afbcf99e 198 Gene3D G3DSA:3.30.160.100 1 107 8.2E-22 T 31-10-2018 IPR036567 Ribosome hibernation promotion factor-like DY252_01905 d6cc0f3228b9e89f780449c1afbcf99e 198 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 191 19.854 T 31-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid DY252_01905 d6cc0f3228b9e89f780449c1afbcf99e 198 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 99 1.4E-19 T 31-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DY252_01905 d6cc0f3228b9e89f780449c1afbcf99e 198 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 133 186 2.7E-14 T 31-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal DY252_01905 d6cc0f3228b9e89f780449c1afbcf99e 198 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 95 7.5E-19 T 31-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DY252_01905 d6cc0f3228b9e89f780449c1afbcf99e 198 Gene3D G3DSA:3.30.505.50 146 191 1.3E-9 T 31-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily DY252_12280 5492ecb9558db54bcf3b7e92ff8f645e 356 SMART SM00382 29 212 1.2E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_12280 5492ecb9558db54bcf3b7e92ff8f645e 356 Pfam PF00005 ABC transporter 21 162 3.3E-31 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_12280 5492ecb9558db54bcf3b7e92ff8f645e 356 SUPERFAMILY SSF50331 237 356 1.11E-29 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_12280 5492ecb9558db54bcf3b7e92ff8f645e 356 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_12280 5492ecb9558db54bcf3b7e92ff8f645e 356 SUPERFAMILY SSF52540 4 243 1.4E-84 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12280 5492ecb9558db54bcf3b7e92ff8f645e 356 Gene3D G3DSA:2.40.50.140 283 340 1.2E-35 T 31-10-2018 DY252_12280 5492ecb9558db54bcf3b7e92ff8f645e 356 Pfam PF08402 TOBE domain 276 348 5.0E-9 T 31-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DY252_12280 5492ecb9558db54bcf3b7e92ff8f645e 356 Gene3D G3DSA:3.40.50.300 4 222 1.0E-61 T 31-10-2018 DY252_12280 5492ecb9558db54bcf3b7e92ff8f645e 356 Gene3D G3DSA:2.40.50.940 223 349 1.2E-35 T 31-10-2018 DY252_08650 cd9dfc5100b25fdc4fc62f0f2643e8e1 422 Pfam PF09375 Imelysin 37 394 4.4E-89 T 31-10-2018 IPR018976 Imelysin-like domain DY252_08650 cd9dfc5100b25fdc4fc62f0f2643e8e1 422 Gene3D G3DSA:1.20.1420.20 15 401 1.1E-79 T 31-10-2018 IPR038352 Imelysin-like domain superfamily DY252_20735 e6cccf8bd1f55064eca340340d8432a8 597 SUPERFAMILY SSF52743 66 423 1.58E-19 T 31-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DY252_20735 e6cccf8bd1f55064eca340340d8432a8 597 Gene3D G3DSA:3.40.50.200 327 465 1.2E-12 T 31-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DY252_20735 e6cccf8bd1f55064eca340340d8432a8 597 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 411 421 - T 31-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site DY252_20735 e6cccf8bd1f55064eca340340d8432a8 597 Pfam PF00082 Subtilase family 148 447 2.0E-10 T 31-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DY252_20735 e6cccf8bd1f55064eca340340d8432a8 597 Gene3D G3DSA:3.40.50.200 48 246 1.7E-10 T 31-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DY252_12985 814dd8a05712df76339fc2a5fd7124ae 505 ProSitePatterns PS00455 Putative AMP-binding domain signature. 162 173 - T 31-10-2018 IPR020845 AMP-binding, conserved site DY252_12985 814dd8a05712df76339fc2a5fd7124ae 505 Gene3D G3DSA:3.40.50.12780 6 398 1.4E-127 T 31-10-2018 DY252_12985 814dd8a05712df76339fc2a5fd7124ae 505 Pfam PF13193 AMP-binding enzyme C-terminal domain 414 489 8.4E-16 T 31-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DY252_12985 814dd8a05712df76339fc2a5fd7124ae 505 Pfam PF00501 AMP-binding enzyme 24 405 1.1E-96 T 31-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DY252_12985 814dd8a05712df76339fc2a5fd7124ae 505 SUPERFAMILY SSF56801 18 498 4.32E-138 T 31-10-2018 DY252_12985 814dd8a05712df76339fc2a5fd7124ae 505 Gene3D G3DSA:3.30.300.310 401 503 3.1E-30 T 31-10-2018 DY252_05195 f9a8939eb0c314208c869c82fb923940 83 Gene3D G3DSA:1.10.1220.50 1 83 7.2E-38 T 31-10-2018 DY252_05195 f9a8939eb0c314208c869c82fb923940 83 Pfam PF09386 Antitoxin ParD 1 78 3.3E-40 T 31-10-2018 IPR022789 Antitoxin ParD DY252_05195 f9a8939eb0c314208c869c82fb923940 83 SUPERFAMILY SSF47598 2 30 7.41E-5 T 31-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 DY252_16100 411da5ee5e5e69242d4bba4cee0ec4df 326 Pfam PF09084 NMT1/THI5 like 36 254 1.9E-37 T 31-10-2018 IPR015168 SsuA/THI5-like DY252_16100 411da5ee5e5e69242d4bba4cee0ec4df 326 Gene3D G3DSA:3.40.190.10 107 213 1.7E-56 T 31-10-2018 DY252_16100 411da5ee5e5e69242d4bba4cee0ec4df 326 Gene3D G3DSA:3.40.190.10 28 299 1.7E-56 T 31-10-2018 DY252_16100 411da5ee5e5e69242d4bba4cee0ec4df 326 SUPERFAMILY SSF53850 25 255 1.77E-27 T 31-10-2018 DY252_18725 701780688c068d23e64dcab7ff37435d 330 Gene3D G3DSA:3.40.50.720 129 303 1.2E-88 T 31-10-2018 DY252_18725 701780688c068d23e64dcab7ff37435d 330 PIRSF PIRSF001439 1 330 4.5E-70 T 31-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 DY252_18725 701780688c068d23e64dcab7ff37435d 330 Gene3D G3DSA:3.30.1780.10 9 325 1.2E-88 T 31-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 DY252_18725 701780688c068d23e64dcab7ff37435d 330 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 6 320 1.3E-103 T 31-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 DY252_18725 701780688c068d23e64dcab7ff37435d 330 SUPERFAMILY SSF51735 3 329 1.81E-88 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_18725 701780688c068d23e64dcab7ff37435d 330 TIGRFAM TIGR02992 ectoine_eutC: ectoine utilization protein EutC 4 327 1.4E-161 T 31-10-2018 IPR014334 Ectoine utilization protein EutC DY252_07625 73a832055c02b45b8ceef6e8bb4c7af2 293 SUPERFAMILY SSF46689 193 239 1.75E-8 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_07625 73a832055c02b45b8ceef6e8bb4c7af2 293 Gene3D G3DSA:1.10.10.60 192 238 5.7E-12 T 31-10-2018 DY252_07625 73a832055c02b45b8ceef6e8bb4c7af2 293 Gene3D G3DSA:1.10.10.60 239 292 4.1E-17 T 31-10-2018 DY252_07625 73a832055c02b45b8ceef6e8bb4c7af2 293 SMART SM00342 205 288 1.0E-30 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_07625 73a832055c02b45b8ceef6e8bb4c7af2 293 Pfam PF12833 Helix-turn-helix domain 211 289 7.2E-23 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_07625 73a832055c02b45b8ceef6e8bb4c7af2 293 SUPERFAMILY SSF46689 241 290 3.36E-12 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_07625 73a832055c02b45b8ceef6e8bb4c7af2 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 272 6.2E-5 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_07625 73a832055c02b45b8ceef6e8bb4c7af2 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 288 6.2E-5 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_13920 6bbd72677d323853fd08e847da79ec2e 240 SUPERFAMILY SSF48613 21 236 7.86E-47 T 31-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DY252_13920 6bbd72677d323853fd08e847da79ec2e 240 Pfam PF03070 TENA/THI-4/PQQC family 34 236 1.5E-19 T 31-10-2018 IPR004305 Thiaminase-2/PQQC DY252_13920 6bbd72677d323853fd08e847da79ec2e 240 PIRSF PIRSF003170 12 240 7.2E-56 T 31-10-2018 IPR026285 TenA_E protein DY252_13920 6bbd72677d323853fd08e847da79ec2e 240 Gene3D G3DSA:1.20.910.10 16 236 1.2E-47 T 31-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DY252_13470 fae43423b1aab732e95cf22c496bd5e4 426 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 334 415 3.1E-30 T 31-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13470 fae43423b1aab732e95cf22c496bd5e4 426 Gene3D G3DSA:3.40.50.11540 52 231 1.1E-84 T 31-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13470 fae43423b1aab732e95cf22c496bd5e4 426 SMART SM00928 331 376 3.7E-26 T 31-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13470 fae43423b1aab732e95cf22c496bd5e4 426 SUPERFAMILY SSF140490 327 421 2.35E-37 T 31-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13470 fae43423b1aab732e95cf22c496bd5e4 426 SUPERFAMILY SSF142984 241 326 9.15E-24 T 31-10-2018 DY252_13470 fae43423b1aab732e95cf22c496bd5e4 426 Pfam PF10531 SLBB domain 243 292 9.3E-7 T 31-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13470 fae43423b1aab732e95cf22c496bd5e4 426 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 8 417 4.7E-200 T 31-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13470 fae43423b1aab732e95cf22c496bd5e4 426 SUPERFAMILY SSF142019 3 240 2.35E-88 T 31-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13470 fae43423b1aab732e95cf22c496bd5e4 426 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 219 2.6E-50 T 31-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13470 fae43423b1aab732e95cf22c496bd5e4 426 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 344 355 - T 31-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13470 fae43423b1aab732e95cf22c496bd5e4 426 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 167 182 - T 31-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13470 fae43423b1aab732e95cf22c496bd5e4 426 Gene3D G3DSA:3.10.20.600 232 328 6.0E-42 T 31-10-2018 DY252_13470 fae43423b1aab732e95cf22c496bd5e4 426 Gene3D G3DSA:1.20.1440.230 329 426 1.4E-38 T 31-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_12380 b1beb397007f974da7630eba3bcdd04f 648 Gene3D G3DSA:1.10.8.500 298 348 1.5E-13 T 31-10-2018 DY252_12380 b1beb397007f974da7630eba3bcdd04f 648 SMART SM00304 297 350 7.1E-4 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_12380 b1beb397007f974da7630eba3bcdd04f 648 SMART SM00283 387 641 1.1E-39 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_12380 b1beb397007f974da7630eba3bcdd04f 648 Pfam PF02743 Cache domain 44 256 3.3E-29 T 31-10-2018 IPR033479 Double Cache domain 1 DY252_12380 b1beb397007f974da7630eba3bcdd04f 648 Gene3D G3DSA:3.30.450.20 64 172 7.9E-60 T 31-10-2018 DY252_12380 b1beb397007f974da7630eba3bcdd04f 648 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 450 607 3.4E-31 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_12380 b1beb397007f974da7630eba3bcdd04f 648 Gene3D G3DSA:3.30.450.20 55 270 7.9E-60 T 31-10-2018 DY252_12380 b1beb397007f974da7630eba3bcdd04f 648 SUPERFAMILY SSF58104 366 639 1.12E-58 T 31-10-2018 DY252_12380 b1beb397007f974da7630eba3bcdd04f 648 Gene3D G3DSA:1.10.287.950 371 640 1.8E-54 T 31-10-2018 DY252_12380 b1beb397007f974da7630eba3bcdd04f 648 SUPERFAMILY SSF158472 298 346 7.19E-8 T 31-10-2018 DY252_12380 b1beb397007f974da7630eba3bcdd04f 648 SUPERFAMILY SSF103190 95 182 1.02E-13 T 31-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DY252_15615 f79ccf3336db7cecc5886b0cf82da8cb 157 Gene3D G3DSA:3.40.50.1000 11 157 4.8E-39 T 31-10-2018 IPR023214 HAD superfamily DY252_15615 f79ccf3336db7cecc5886b0cf82da8cb 157 SUPERFAMILY SSF56784 11 155 3.07E-21 T 31-10-2018 IPR036412 HAD-like superfamily DY252_03960 e0ac38f5da3de7e9eec4b5b2fb0e70f2 240 Pfam PF01895 PhoU domain 23 110 2.6E-22 T 31-10-2018 IPR026022 PhoU domain DY252_03960 e0ac38f5da3de7e9eec4b5b2fb0e70f2 240 Pfam PF01895 PhoU domain 128 210 5.1E-22 T 31-10-2018 IPR026022 PhoU domain DY252_03960 e0ac38f5da3de7e9eec4b5b2fb0e70f2 240 Gene3D G3DSA:1.20.58.220 117 228 1.2E-41 T 31-10-2018 IPR038078 PhoU-like domain superfamily DY252_03960 e0ac38f5da3de7e9eec4b5b2fb0e70f2 240 SUPERFAMILY SSF109755 10 221 1.15E-75 T 31-10-2018 DY252_03960 e0ac38f5da3de7e9eec4b5b2fb0e70f2 240 PIRSF PIRSF003107 5 224 3.6E-69 T 31-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 DY252_03960 e0ac38f5da3de7e9eec4b5b2fb0e70f2 240 Gene3D G3DSA:1.20.58.220 2 116 5.7E-37 T 31-10-2018 IPR038078 PhoU-like domain superfamily DY252_03960 e0ac38f5da3de7e9eec4b5b2fb0e70f2 240 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 11 219 3.9E-72 T 31-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 DY252_03250 4bd16cfa3db1580b45678d1234e14418 231 SUPERFAMILY SSF52540 2 220 5.84E-55 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_03250 4bd16cfa3db1580b45678d1234e14418 231 Pfam PF00005 ABC transporter 17 160 2.4E-29 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_03250 4bd16cfa3db1580b45678d1234e14418 231 SMART SM00382 26 210 1.6E-8 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_03250 4bd16cfa3db1580b45678d1234e14418 231 Gene3D G3DSA:3.40.50.300 1 231 3.7E-58 T 31-10-2018 DY252_03250 4bd16cfa3db1580b45678d1234e14418 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 231 5.3E-105 T 31-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE DY252_00605 ea576c58314b0823119c4df77c951315 258 SUPERFAMILY SSF52096 1 258 2.2E-90 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_00605 ea576c58314b0823119c4df77c951315 258 Gene3D G3DSA:1.10.12.10 203 257 1.1E-23 T 31-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DY252_00605 ea576c58314b0823119c4df77c951315 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 257 6.5E-86 T 31-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DY252_00605 ea576c58314b0823119c4df77c951315 258 Gene3D G3DSA:3.90.226.10 1 199 4.0E-79 T 31-10-2018 DY252_00605 ea576c58314b0823119c4df77c951315 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 31-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DY252_08520 b194ae23b20be182ed689d707f1b2e12 268 SUPERFAMILY SSF53335 40 245 6.25E-39 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_08520 b194ae23b20be182ed689d707f1b2e12 268 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 49 244 29.728 T 31-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 DY252_08520 b194ae23b20be182ed689d707f1b2e12 268 Gene3D G3DSA:3.40.50.150 64 251 1.4E-58 T 31-10-2018 DY252_08520 b194ae23b20be182ed689d707f1b2e12 268 PIRSF PIRSF005461 30 256 1.8E-73 T 31-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 DY252_08520 b194ae23b20be182ed689d707f1b2e12 268 Pfam PF01728 FtsJ-like methyltransferase 65 243 3.1E-53 T 31-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 DY252_12740 40779ee24ecfd25dc6aaa6f33a79b703 459 Gene3D G3DSA:3.40.50.11060 42 164 4.0E-33 T 31-10-2018 DY252_12740 40779ee24ecfd25dc6aaa6f33a79b703 459 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 48 392 1.9E-129 T 31-10-2018 IPR016496 GTPase HflX GO:0005525 DY252_12740 40779ee24ecfd25dc6aaa6f33a79b703 459 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 247 1.8E-6 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_12740 40779ee24ecfd25dc6aaa6f33a79b703 459 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 294 312 1.8E-6 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_12740 40779ee24ecfd25dc6aaa6f33a79b703 459 Pfam PF13167 GTP-binding GTPase N-terminal 51 138 5.8E-24 T 31-10-2018 IPR025121 GTPase HflX, N-terminal DY252_12740 40779ee24ecfd25dc6aaa6f33a79b703 459 Pfam PF01926 50S ribosome-binding GTPase 227 335 1.6E-17 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_12740 40779ee24ecfd25dc6aaa6f33a79b703 459 PIRSF PIRSF006809 24 452 1.7E-136 T 31-10-2018 IPR016496 GTPase HflX GO:0005525 DY252_12740 40779ee24ecfd25dc6aaa6f33a79b703 459 Gene3D G3DSA:3.40.50.300 224 397 5.0E-37 T 31-10-2018 DY252_12740 40779ee24ecfd25dc6aaa6f33a79b703 459 Pfam PF16360 GTP-binding GTPase Middle Region 140 219 6.4E-27 T 31-10-2018 IPR032305 GTP-binding protein, middle domain DY252_12740 40779ee24ecfd25dc6aaa6f33a79b703 459 Hamap MF_00900 GTPase HflX [hflX]. 53 422 46.01 T 31-10-2018 IPR016496 GTPase HflX GO:0005525 DY252_12740 40779ee24ecfd25dc6aaa6f33a79b703 459 SUPERFAMILY SSF52540 225 403 9.23E-38 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_08645 ee5e10c20326ff1ec9a8b7c0f9210fc5 487 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 39 487 8.3E-135 T 31-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase DY252_08645 ee5e10c20326ff1ec9a8b7c0f9210fc5 487 SUPERFAMILY SSF46626 345 487 5.61E-25 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_08645 ee5e10c20326ff1ec9a8b7c0f9210fc5 487 PIRSF PIRSF028099 9 487 3.5E-175 T 31-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase DY252_08645 ee5e10c20326ff1ec9a8b7c0f9210fc5 487 Gene3D G3DSA:1.10.760.10 333 487 1.2E-8 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_06900 afec48378b34408af6ae605ff655d9ac 220 Gene3D G3DSA:3.40.190.10 100 186 3.8E-63 T 31-10-2018 DY252_06900 afec48378b34408af6ae605ff655d9ac 220 SUPERFAMILY SSF53850 4 218 1.11E-61 T 31-10-2018 DY252_06900 afec48378b34408af6ae605ff655d9ac 220 Pfam PF01634 ATP phosphoribosyltransferase 58 213 4.4E-45 T 31-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DY252_06900 afec48378b34408af6ae605ff655d9ac 220 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 6 218 47.18 T 31-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 DY252_06900 afec48378b34408af6ae605ff655d9ac 220 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 194 2.3E-55 T 31-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DY252_06900 afec48378b34408af6ae605ff655d9ac 220 Gene3D G3DSA:3.40.190.10 9 206 3.8E-63 T 31-10-2018 DY252_15655 d7bca5d9e4e9c7f52355afdca59cd2de 255 Gene3D G3DSA:3.60.20.10 1 254 2.1E-99 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_15655 d7bca5d9e4e9c7f52355afdca59cd2de 255 Pfam PF13230 Glutamine amidotransferases class-II 29 199 7.7E-17 T 31-10-2018 IPR026869 Putative glutamine amidotransferase type 2 DY252_15655 d7bca5d9e4e9c7f52355afdca59cd2de 255 SUPERFAMILY SSF56235 2 246 5.15E-36 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_11845 124d07cd55153d1440cf70afd7ff3f63 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 41 - T 31-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DY252_11845 124d07cd55153d1440cf70afd7ff3f63 254 SUPERFAMILY SSF100950 75 234 4.54E-28 T 31-10-2018 IPR037171 NagB/RpiA transferase-like DY252_11845 124d07cd55153d1440cf70afd7ff3f63 254 SUPERFAMILY SSF46785 3 76 4.21E-16 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_11845 124d07cd55153d1440cf70afd7ff3f63 254 Gene3D G3DSA:3.30.750.70 73 136 1.9E-5 T 31-10-2018 DY252_11845 124d07cd55153d1440cf70afd7ff3f63 254 Gene3D G3DSA:1.10.10.10 2 56 4.0E-8 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_11845 124d07cd55153d1440cf70afd7ff3f63 254 Pfam PF08220 DeoR-like helix-turn-helix domain 7 62 5.0E-19 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_11845 124d07cd55153d1440cf70afd7ff3f63 254 Pfam PF00455 DeoR C terminal sensor domain 77 233 3.0E-52 T 31-10-2018 IPR014036 DeoR C-terminal sensor domain DY252_11845 124d07cd55153d1440cf70afd7ff3f63 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 1.7E-11 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_11845 124d07cd55153d1440cf70afd7ff3f63 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 1.7E-11 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_11845 124d07cd55153d1440cf70afd7ff3f63 254 SMART SM00420 7 59 8.8E-20 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_11845 124d07cd55153d1440cf70afd7ff3f63 254 SMART SM01134 73 234 4.3E-68 T 31-10-2018 DY252_00305 5c67766d4ae999a55fd2ac8561e0cbbb 215 Pfam PF13462 Thioredoxin 50 207 2.3E-20 T 31-10-2018 IPR012336 Thioredoxin-like fold DY252_00305 5c67766d4ae999a55fd2ac8561e0cbbb 215 Gene3D G3DSA:3.40.30.10 46 215 1.0E-36 T 31-10-2018 DY252_00305 5c67766d4ae999a55fd2ac8561e0cbbb 215 SUPERFAMILY SSF52833 43 208 1.58E-36 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_05095 680e9630cd0b444e51b44356b8fa51dc 503 ProSitePatterns PS00080 Multicopper oxidases signature 2. 485 496 - T 31-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 DY252_05095 680e9630cd0b444e51b44356b8fa51dc 503 Pfam PF00394 Multicopper oxidase 207 291 9.3E-8 T 31-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 DY252_05095 680e9630cd0b444e51b44356b8fa51dc 503 SUPERFAMILY SSF49503 389 500 1.11E-30 T 31-10-2018 IPR008972 Cupredoxin DY252_05095 680e9630cd0b444e51b44356b8fa51dc 503 SUPERFAMILY SSF49503 69 196 1.83E-38 T 31-10-2018 IPR008972 Cupredoxin DY252_05095 680e9630cd0b444e51b44356b8fa51dc 503 Gene3D G3DSA:2.60.40.420 177 305 1.1E-29 T 31-10-2018 IPR008972 Cupredoxin DY252_05095 680e9630cd0b444e51b44356b8fa51dc 503 SUPERFAMILY SSF49503 174 298 1.88E-18 T 31-10-2018 IPR008972 Cupredoxin DY252_05095 680e9630cd0b444e51b44356b8fa51dc 503 Gene3D G3DSA:2.60.40.420 45 172 2.1E-43 T 31-10-2018 IPR008972 Cupredoxin DY252_05095 680e9630cd0b444e51b44356b8fa51dc 503 Pfam PF07732 Multicopper oxidase 66 173 4.2E-38 T 31-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 DY252_05095 680e9630cd0b444e51b44356b8fa51dc 503 Pfam PF07731 Multicopper oxidase 411 498 2.0E-26 T 31-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 DY252_05095 680e9630cd0b444e51b44356b8fa51dc 503 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 31 1.7E-4 T 31-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DY252_05095 680e9630cd0b444e51b44356b8fa51dc 503 Gene3D G3DSA:2.60.40.420 332 503 2.8E-41 T 31-10-2018 IPR008972 Cupredoxin DY252_06795 2dd9e43c4a6e1af634bdf7ea6ea4fa25 261 Pfam PF05175 Methyltransferase small domain 52 142 4.2E-8 T 31-10-2018 IPR007848 Methyltransferase small domain GO:0008168 DY252_06795 2dd9e43c4a6e1af634bdf7ea6ea4fa25 261 SUPERFAMILY SSF53335 36 194 1.31E-25 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_06795 2dd9e43c4a6e1af634bdf7ea6ea4fa25 261 Gene3D G3DSA:3.40.50.150 19 256 3.2E-49 T 31-10-2018 DY252_06795 2dd9e43c4a6e1af634bdf7ea6ea4fa25 261 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 31-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DY252_16085 be43ff29ac08d9a856ea2f30f1205b4c 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_16085 be43ff29ac08d9a856ea2f30f1205b4c 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 7.8E-12 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_16085 be43ff29ac08d9a856ea2f30f1205b4c 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 7.8E-12 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_16085 be43ff29ac08d9a856ea2f30f1205b4c 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 7.8E-12 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_16085 be43ff29ac08d9a856ea2f30f1205b4c 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 1.0E-61 T 31-10-2018 DY252_16085 be43ff29ac08d9a856ea2f30f1205b4c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 7.1E-40 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_16085 be43ff29ac08d9a856ea2f30f1205b4c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 7.1E-40 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_16085 be43ff29ac08d9a856ea2f30f1205b4c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 7.1E-40 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_16085 be43ff29ac08d9a856ea2f30f1205b4c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 7.1E-40 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_16085 be43ff29ac08d9a856ea2f30f1205b4c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 7.1E-40 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_16085 be43ff29ac08d9a856ea2f30f1205b4c 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.1E-40 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_16085 be43ff29ac08d9a856ea2f30f1205b4c 246 SUPERFAMILY SSF51735 6 245 5.76E-79 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_16085 be43ff29ac08d9a856ea2f30f1205b4c 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 185 3.7E-4 T 31-10-2018 DY252_16085 be43ff29ac08d9a856ea2f30f1205b4c 246 Gene3D G3DSA:3.40.50.720 2 246 5.9E-78 T 31-10-2018 DY252_10765 c87356bd0d8a5863a4bf4fe514b6bef4 292 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 10 202 18.12 T 31-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 DY252_10765 c87356bd0d8a5863a4bf4fe514b6bef4 292 Pfam PF01794 Ferric reductase like transmembrane component 55 163 2.5E-13 T 31-10-2018 IPR013130 Ferric reductase transmembrane component-like domain DY252_09435 397f61914360513dac769e60ba25e7dd 370 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 30 268 2.3E-20 T 31-10-2018 IPR018642 Protein of unknown function DUF2066 DY252_11575 db9a0b1adeda92f9730c4661424f62bf 224 Gene3D G3DSA:3.40.50.1000 9 205 8.7E-49 T 31-10-2018 IPR023214 HAD superfamily DY252_11575 db9a0b1adeda92f9730c4661424f62bf 224 SUPERFAMILY SSF56784 6 220 1.11E-46 T 31-10-2018 IPR036412 HAD-like superfamily DY252_11575 db9a0b1adeda92f9730c4661424f62bf 224 Gene3D G3DSA:1.10.150.240 21 87 8.7E-49 T 31-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DY252_11575 db9a0b1adeda92f9730c4661424f62bf 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 100 188 2.1E-14 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_11575 db9a0b1adeda92f9730c4661424f62bf 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 2.3E-7 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_11575 db9a0b1adeda92f9730c4661424f62bf 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 171 2.3E-7 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_11575 db9a0b1adeda92f9730c4661424f62bf 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 133 149 2.3E-7 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_11575 db9a0b1adeda92f9730c4661424f62bf 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 101 114 2.3E-7 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_11575 db9a0b1adeda92f9730c4661424f62bf 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 188 1.6E-25 T 31-10-2018 DY252_17735 43586099a4b6f8cf8faeeda78db8b628 159 Pfam PF04073 Aminoacyl-tRNA editing domain 29 147 8.6E-31 T 31-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DY252_17735 43586099a4b6f8cf8faeeda78db8b628 159 Gene3D G3DSA:3.90.960.10 10 157 1.3E-41 T 31-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DY252_17735 43586099a4b6f8cf8faeeda78db8b628 159 SUPERFAMILY SSF55826 21 150 9.03E-33 T 31-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DY252_04310 e940d52735e49b321ca5756310343a58 527 PRINTS PR01165 Cytochrome c oxidase subunit I signature 66 89 3.3E-151 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04310 e940d52735e49b321ca5756310343a58 527 PRINTS PR01165 Cytochrome c oxidase subunit I signature 197 216 3.3E-151 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04310 e940d52735e49b321ca5756310343a58 527 PRINTS PR01165 Cytochrome c oxidase subunit I signature 168 186 3.3E-151 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04310 e940d52735e49b321ca5756310343a58 527 PRINTS PR01165 Cytochrome c oxidase subunit I signature 248 269 3.3E-151 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04310 e940d52735e49b321ca5756310343a58 527 PRINTS PR01165 Cytochrome c oxidase subunit I signature 294 309 3.3E-151 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04310 e940d52735e49b321ca5756310343a58 527 PRINTS PR01165 Cytochrome c oxidase subunit I signature 381 400 3.3E-151 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04310 e940d52735e49b321ca5756310343a58 527 PRINTS PR01165 Cytochrome c oxidase subunit I signature 136 148 3.3E-151 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04310 e940d52735e49b321ca5756310343a58 527 PRINTS PR01165 Cytochrome c oxidase subunit I signature 318 339 3.3E-151 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04310 e940d52735e49b321ca5756310343a58 527 PRINTS PR01165 Cytochrome c oxidase subunit I signature 353 371 3.3E-151 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04310 e940d52735e49b321ca5756310343a58 527 PRINTS PR01165 Cytochrome c oxidase subunit I signature 94 118 3.3E-151 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04310 e940d52735e49b321ca5756310343a58 527 PRINTS PR01165 Cytochrome c oxidase subunit I signature 431 452 3.3E-151 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04310 e940d52735e49b321ca5756310343a58 527 PRINTS PR01165 Cytochrome c oxidase subunit I signature 18 43 3.3E-151 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04310 e940d52735e49b321ca5756310343a58 527 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 250 304 - T 31-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04310 e940d52735e49b321ca5756310343a58 527 Gene3D G3DSA:1.20.210.10 14 527 4.7E-242 T 31-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04310 e940d52735e49b321ca5756310343a58 527 SUPERFAMILY SSF81442 16 526 4.32E-221 T 31-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04310 e940d52735e49b321ca5756310343a58 527 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 19 525 3.6E-218 T 31-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 DY252_04310 e940d52735e49b321ca5756310343a58 527 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 27 473 4.7E-156 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_00355 020f10bb9cf6decb7025e4c65b7d834a 151 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 36 90 1.9E-12 T 31-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 DY252_00355 020f10bb9cf6decb7025e4c65b7d834a 151 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 93 148 1.9E-12 T 31-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 DY252_00355 020f10bb9cf6decb7025e4c65b7d834a 151 Gene3D G3DSA:1.10.60.10 93 151 7.7E-22 T 31-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 DY252_00355 020f10bb9cf6decb7025e4c65b7d834a 151 Gene3D G3DSA:1.10.10.10 22 92 1.0E-22 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_00355 020f10bb9cf6decb7025e4c65b7d834a 151 SUPERFAMILY SSF47979 93 149 1.57E-13 T 31-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 DY252_00355 020f10bb9cf6decb7025e4c65b7d834a 151 SMART SM00529 54 150 4.6E-33 T 31-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 DY252_00355 020f10bb9cf6decb7025e4c65b7d834a 151 SUPERFAMILY SSF46785 35 92 4.98E-14 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 SUPERFAMILY SSF81901 258 393 1.31E-22 T 31-10-2018 DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 Gene3D G3DSA:1.25.40.10 85 212 3.2E-39 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 Pfam PF08238 Sel1 repeat 170 204 7.8E-4 T 31-10-2018 IPR006597 Sel1-like repeat DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 Pfam PF08238 Sel1 repeat 207 241 1.3E-5 T 31-10-2018 IPR006597 Sel1-like repeat DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 Pfam PF08238 Sel1 repeat 318 349 4.7E-7 T 31-10-2018 IPR006597 Sel1-like repeat DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 Pfam PF08238 Sel1 repeat 99 129 3.1E-5 T 31-10-2018 IPR006597 Sel1-like repeat DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 Pfam PF08238 Sel1 repeat 135 169 3.4E-10 T 31-10-2018 IPR006597 Sel1-like repeat DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 Pfam PF08238 Sel1 repeat 242 254 46.0 T 31-10-2018 IPR006597 Sel1-like repeat DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 Pfam PF08238 Sel1 repeat 352 381 5.4E-4 T 31-10-2018 IPR006597 Sel1-like repeat DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 Pfam PF08238 Sel1 repeat 61 86 0.64 T 31-10-2018 IPR006597 Sel1-like repeat DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 SUPERFAMILY SSF81901 82 285 1.22E-42 T 31-10-2018 DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 SUPERFAMILY SSF81901 8 88 7.72E-7 T 31-10-2018 DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 SMART SM00671 98 133 9.5E-6 T 31-10-2018 IPR006597 Sel1-like repeat DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 SMART SM00671 134 169 9.9E-12 T 31-10-2018 IPR006597 Sel1-like repeat DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 SMART SM00671 206 241 0.0053 T 31-10-2018 IPR006597 Sel1-like repeat DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 SMART SM00671 55 90 69.0 T 31-10-2018 IPR006597 Sel1-like repeat DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 SMART SM00671 19 54 84.0 T 31-10-2018 IPR006597 Sel1-like repeat DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 SMART SM00671 277 313 49.0 T 31-10-2018 IPR006597 Sel1-like repeat DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 SMART SM00671 350 385 0.0067 T 31-10-2018 IPR006597 Sel1-like repeat DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 SMART SM00671 314 349 4.6E-8 T 31-10-2018 IPR006597 Sel1-like repeat DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 SMART SM00671 170 205 0.001 T 31-10-2018 IPR006597 Sel1-like repeat DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 Gene3D G3DSA:1.25.40.10 1 84 4.4E-7 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_17495 ed2d21b54b078f3cba5ef2f25af63608 439 Gene3D G3DSA:1.25.40.10 236 416 3.3E-37 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_06375 b756d8efe2c9a449d8ed2e0caaccab3a 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_06375 b756d8efe2c9a449d8ed2e0caaccab3a 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.4E-10 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_06375 b756d8efe2c9a449d8ed2e0caaccab3a 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.4E-10 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_06375 b756d8efe2c9a449d8ed2e0caaccab3a 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.4E-10 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_06375 b756d8efe2c9a449d8ed2e0caaccab3a 245 Gene3D G3DSA:3.40.50.720 1 245 4.0E-80 T 31-10-2018 DY252_06375 b756d8efe2c9a449d8ed2e0caaccab3a 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 244 9.6E-61 T 31-10-2018 DY252_06375 b756d8efe2c9a449d8ed2e0caaccab3a 245 SUPERFAMILY SSF51735 3 244 9.46E-76 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_06375 b756d8efe2c9a449d8ed2e0caaccab3a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.9E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_06375 b756d8efe2c9a449d8ed2e0caaccab3a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.9E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_06375 b756d8efe2c9a449d8ed2e0caaccab3a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.9E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_06375 b756d8efe2c9a449d8ed2e0caaccab3a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.9E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_06375 b756d8efe2c9a449d8ed2e0caaccab3a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.9E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_06375 b756d8efe2c9a449d8ed2e0caaccab3a 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.9E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_06375 b756d8efe2c9a449d8ed2e0caaccab3a 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 189 1.9E-5 T 31-10-2018 DY252_19445 423329397b830e16be92fb38e6e9a694 295 SUPERFAMILY SSF46689 192 241 8.96E-10 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_19445 423329397b830e16be92fb38e6e9a694 295 Gene3D G3DSA:1.10.10.60 190 249 2.7E-16 T 31-10-2018 DY252_19445 423329397b830e16be92fb38e6e9a694 295 SUPERFAMILY SSF46689 244 292 1.34E-12 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_19445 423329397b830e16be92fb38e6e9a694 295 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_19445 423329397b830e16be92fb38e6e9a694 295 Pfam PF12833 Helix-turn-helix domain 213 291 2.8E-22 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_19445 423329397b830e16be92fb38e6e9a694 295 SMART SM00342 207 290 1.6E-29 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_19445 423329397b830e16be92fb38e6e9a694 295 Gene3D G3DSA:1.10.10.60 250 294 1.5E-14 T 31-10-2018 DY252_11455 a000ba9be81f0dbf66daeb87e4d6bbeb 343 Gene3D G3DSA:3.40.190.100 119 260 7.3E-53 T 31-10-2018 DY252_11455 a000ba9be81f0dbf66daeb87e4d6bbeb 343 SUPERFAMILY SSF53850 30 338 1.9E-73 T 31-10-2018 DY252_11455 a000ba9be81f0dbf66daeb87e4d6bbeb 343 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 36 321 4.2E-60 T 31-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 DY252_11455 a000ba9be81f0dbf66daeb87e4d6bbeb 343 Gene3D G3DSA:3.40.190.10 37 331 7.3E-53 T 31-10-2018 DY252_03775 1ab48ad32a6bb917f6e81911bdef01ec 680 Pfam PF07719 Tetratricopeptide repeat 92 124 3.4E-6 T 31-10-2018 IPR013105 Tetratricopeptide repeat 2 DY252_03775 1ab48ad32a6bb917f6e81911bdef01ec 680 Gene3D G3DSA:3.40.50.2000 466 645 2.0E-138 T 31-10-2018 DY252_03775 1ab48ad32a6bb917f6e81911bdef01ec 680 Pfam PF13174 Tetratricopeptide repeat 15 36 0.033 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_03775 1ab48ad32a6bb917f6e81911bdef01ec 680 Gene3D G3DSA:3.40.50.11380 297 651 2.0E-138 T 31-10-2018 DY252_03775 1ab48ad32a6bb917f6e81911bdef01ec 680 SMART SM00028 92 125 5.3E-5 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_03775 1ab48ad32a6bb917f6e81911bdef01ec 680 SMART SM00028 194 227 9.5E-4 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_03775 1ab48ad32a6bb917f6e81911bdef01ec 680 SMART SM00028 58 91 490.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_03775 1ab48ad32a6bb917f6e81911bdef01ec 680 SMART SM00028 160 193 0.48 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_03775 1ab48ad32a6bb917f6e81911bdef01ec 680 SMART SM00028 126 159 0.0052 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_03775 1ab48ad32a6bb917f6e81911bdef01ec 680 SMART SM00028 4 37 28.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_03775 1ab48ad32a6bb917f6e81911bdef01ec 680 Pfam PF13181 Tetratricopeptide repeat 194 227 0.0024 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_03775 1ab48ad32a6bb917f6e81911bdef01ec 680 SUPERFAMILY SSF48452 58 230 3.98E-34 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_03775 1ab48ad32a6bb917f6e81911bdef01ec 680 SUPERFAMILY SSF48452 150 507 4.93E-14 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_03775 1ab48ad32a6bb917f6e81911bdef01ec 680 Gene3D G3DSA:1.25.40.10 164 259 1.0E-15 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_03775 1ab48ad32a6bb917f6e81911bdef01ec 680 Pfam PF13844 Glycosyl transferase family 41 469 663 1.3E-54 T 31-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 DY252_03775 1ab48ad32a6bb917f6e81911bdef01ec 680 Pfam PF13844 Glycosyl transferase family 41 309 456 9.6E-35 T 31-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 DY252_03775 1ab48ad32a6bb917f6e81911bdef01ec 680 Gene3D G3DSA:1.25.40.10 4 163 4.4E-27 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_03775 1ab48ad32a6bb917f6e81911bdef01ec 680 SUPERFAMILY SSF53756 463 637 3.11E-6 T 31-10-2018 DY252_02315 d51a72f96babe07653c6b7b099b68d63 55 Gene3D G3DSA:2.10.70.10 16 55 1.3E-19 T 31-10-2018 DY252_02315 d51a72f96babe07653c6b7b099b68d63 55 Pfam PF10636 Hemin uptake protein hemP 21 55 6.0E-18 T 31-10-2018 IPR019600 Hemin uptake protein HemP DY252_12570 8d8a76c24e11fdfafbcdf11aca15d1b1 244 SMART SM00421 145 204 0.0056 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_12570 8d8a76c24e11fdfafbcdf11aca15d1b1 244 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 195 3.0E-5 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_12570 8d8a76c24e11fdfafbcdf11aca15d1b1 244 Gene3D G3DSA:1.10.10.10 145 221 1.7E-9 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_12570 8d8a76c24e11fdfafbcdf11aca15d1b1 244 Gene3D G3DSA:3.40.50.2300 1 144 4.8E-23 T 31-10-2018 DY252_12570 8d8a76c24e11fdfafbcdf11aca15d1b1 244 Pfam PF00072 Response regulator receiver domain 3 119 1.2E-14 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_12570 8d8a76c24e11fdfafbcdf11aca15d1b1 244 SUPERFAMILY SSF52172 1 131 1.71E-20 T 31-10-2018 IPR011006 CheY-like superfamily DY252_12570 8d8a76c24e11fdfafbcdf11aca15d1b1 244 SMART SM00448 1 119 9.4E-7 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_12570 8d8a76c24e11fdfafbcdf11aca15d1b1 244 SUPERFAMILY SSF46894 136 195 3.4E-9 T 31-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DY252_21280 e30fba59ab40413d6910f681f41a97e5 1085 SUPERFAMILY SSF52540 166 620 2.82E-8 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_21280 e30fba59ab40413d6910f681f41a97e5 1085 Pfam PF04851 Type III restriction enzyme, res subunit 167 320 4.2E-6 T 31-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DY252_21280 e30fba59ab40413d6910f681f41a97e5 1085 Gene3D G3DSA:3.40.50.300 159 336 7.8E-7 T 31-10-2018 DY252_02185 b42e26169d96340baf80365ad41c94db 223 SUPERFAMILY SSF46785 6 72 1.26E-14 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_02185 b42e26169d96340baf80365ad41c94db 223 Gene3D G3DSA:1.10.10.10 5 72 4.9E-16 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_02185 b42e26169d96340baf80365ad41c94db 223 SMART SM00895 90 215 1.3E-21 T 31-10-2018 IPR011711 GntR, C-terminal DY252_02185 b42e26169d96340baf80365ad41c94db 223 Pfam PF07729 FCD domain 90 214 2.5E-22 T 31-10-2018 IPR011711 GntR, C-terminal DY252_02185 b42e26169d96340baf80365ad41c94db 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 3.3E-7 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_02185 b42e26169d96340baf80365ad41c94db 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 3.3E-7 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_02185 b42e26169d96340baf80365ad41c94db 223 SMART SM00345 9 68 6.2E-13 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_02185 b42e26169d96340baf80365ad41c94db 223 Gene3D G3DSA:1.20.120.530 81 223 2.1E-27 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_02185 b42e26169d96340baf80365ad41c94db 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 6.1E-13 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_02185 b42e26169d96340baf80365ad41c94db 223 SUPERFAMILY SSF48008 87 221 7.32E-25 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_01310 c94d94b62b3a2e8807cd3a8c637c027b 123 ProSitePatterns PS00892 HIT domain signature. 94 112 - T 31-10-2018 IPR019808 Histidine triad, conserved site DY252_01310 c94d94b62b3a2e8807cd3a8c637c027b 123 Pfam PF01230 HIT domain 17 115 7.1E-25 T 31-10-2018 IPR001310 Histidine triad (HIT) protein DY252_01310 c94d94b62b3a2e8807cd3a8c637c027b 123 SUPERFAMILY SSF54197 6 118 1.05E-30 T 31-10-2018 IPR036265 HIT-like superfamily DY252_01310 c94d94b62b3a2e8807cd3a8c637c027b 123 PRINTS PR00332 Histidine triad family signature 32 50 5.4E-20 T 31-10-2018 IPR001310 Histidine triad (HIT) protein DY252_01310 c94d94b62b3a2e8807cd3a8c637c027b 123 PRINTS PR00332 Histidine triad family signature 11 27 5.4E-20 T 31-10-2018 IPR001310 Histidine triad (HIT) protein DY252_01310 c94d94b62b3a2e8807cd3a8c637c027b 123 PRINTS PR00332 Histidine triad family signature 101 111 5.4E-20 T 31-10-2018 IPR001310 Histidine triad (HIT) protein DY252_01310 c94d94b62b3a2e8807cd3a8c637c027b 123 Gene3D G3DSA:3.30.428.10 2 118 1.4E-29 T 31-10-2018 IPR036265 HIT-like superfamily DY252_09845 7240ff38fa9251d17da0ded2fbe50d61 451 Gene3D G3DSA:1.10.10.920 361 451 6.0E-23 T 31-10-2018 DY252_09845 7240ff38fa9251d17da0ded2fbe50d61 451 PIRSF PIRSF000167 1 451 8.6E-169 T 31-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 DY252_09845 7240ff38fa9251d17da0ded2fbe50d61 451 Pfam PF04055 Radical SAM superfamily 52 224 1.2E-16 T 31-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DY252_09845 7240ff38fa9251d17da0ded2fbe50d61 451 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 3 444 8.9E-141 T 31-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 DY252_09845 7240ff38fa9251d17da0ded2fbe50d61 451 SMART SM00729 46 269 1.0E-49 T 31-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DY252_09845 7240ff38fa9251d17da0ded2fbe50d61 451 Gene3D G3DSA:3.80.30.20 1 360 2.5E-110 T 31-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DY252_09845 7240ff38fa9251d17da0ded2fbe50d61 451 SUPERFAMILY SSF102114 3 440 1.2E-124 T 31-10-2018 DY252_09845 7240ff38fa9251d17da0ded2fbe50d61 451 Pfam PF06969 HemN C-terminal domain 360 426 6.1E-9 T 31-10-2018 IPR010723 HemN, C-terminal DY252_21700 cbc7a84eb8e9ee90260518da21cb9556 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.2E-9 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_21700 cbc7a84eb8e9ee90260518da21cb9556 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.2E-9 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_21700 cbc7a84eb8e9ee90260518da21cb9556 224 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 31-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DY252_21700 cbc7a84eb8e9ee90260518da21cb9556 224 SUPERFAMILY SSF48498 83 208 4.06E-17 T 31-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DY252_21700 cbc7a84eb8e9ee90260518da21cb9556 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 1.4E-15 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_21700 cbc7a84eb8e9ee90260518da21cb9556 224 Gene3D G3DSA:1.10.357.10 53 208 2.3E-24 T 31-10-2018 DY252_21700 cbc7a84eb8e9ee90260518da21cb9556 224 Gene3D G3DSA:1.10.10.60 5 51 5.4E-20 T 31-10-2018 DY252_21700 cbc7a84eb8e9ee90260518da21cb9556 224 SUPERFAMILY SSF46689 3 72 1.16E-18 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_05200 fbea4873ba48076b6384556df15ef129 317 TIGRFAM TIGR01230 agmatinase: agmatinase 29 308 3.3E-57 T 31-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 DY252_05200 fbea4873ba48076b6384556df15ef129 317 PIRSF PIRSF036979 15 314 1.3E-75 T 31-10-2018 IPR006035 Ureohydrolase GO:0046872 DY252_05200 fbea4873ba48076b6384556df15ef129 317 SUPERFAMILY SSF52768 11 312 5.58E-85 T 31-10-2018 IPR023696 Ureohydrolase domain superfamily DY252_05200 fbea4873ba48076b6384556df15ef129 317 Gene3D G3DSA:3.40.800.10 8 315 5.6E-99 T 31-10-2018 DY252_05200 fbea4873ba48076b6384556df15ef129 317 Pfam PF00491 Arginase family 35 306 6.0E-76 T 31-10-2018 IPR006035 Ureohydrolase GO:0046872 DY252_05200 fbea4873ba48076b6384556df15ef129 317 ProSitePatterns PS01053 Arginase family signature. 238 259 - T 31-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 DY252_14450 544773fb641650751ad9624bbccddbc1 323 Pfam PF00892 EamA-like transporter family 157 285 2.9E-16 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_14450 544773fb641650751ad9624bbccddbc1 323 Pfam PF00892 EamA-like transporter family 11 141 2.5E-23 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_14450 544773fb641650751ad9624bbccddbc1 323 SUPERFAMILY SSF103481 189 289 1.06E-11 T 31-10-2018 DY252_14450 544773fb641650751ad9624bbccddbc1 323 SUPERFAMILY SSF103481 42 144 6.15E-14 T 31-10-2018 DY252_16885 9676d8362325d0c30c95a9bbc89cfb86 835 SMART SM00847 397 489 3.0E-12 T 31-10-2018 IPR007502 Helicase-associated domain GO:0004386 DY252_16885 9676d8362325d0c30c95a9bbc89cfb86 835 Gene3D G3DSA:3.40.50.300 185 354 2.2E-51 T 31-10-2018 DY252_16885 9676d8362325d0c30c95a9bbc89cfb86 835 Pfam PF00271 Helicase conserved C-terminal domain 217 336 4.1E-11 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_16885 9676d8362325d0c30c95a9bbc89cfb86 835 Gene3D G3DSA:3.40.50.300 1 184 6.6E-56 T 31-10-2018 DY252_16885 9676d8362325d0c30c95a9bbc89cfb86 835 SUPERFAMILY SSF52540 20 348 6.67E-48 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_16885 9676d8362325d0c30c95a9bbc89cfb86 835 Pfam PF00270 DEAD/DEAH box helicase 17 168 5.1E-9 T 31-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DY252_16885 9676d8362325d0c30c95a9bbc89cfb86 835 SMART SM00487 6 191 1.7E-17 T 31-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DY252_16885 9676d8362325d0c30c95a9bbc89cfb86 835 Gene3D G3DSA:1.20.120.1080 384 484 3.1E-11 T 31-10-2018 DY252_16885 9676d8362325d0c30c95a9bbc89cfb86 835 Pfam PF08482 ATP-dependent helicase C-terminal 691 822 2.2E-54 T 31-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal DY252_16885 9676d8362325d0c30c95a9bbc89cfb86 835 SMART SM00490 235 337 3.9E-15 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_16885 9676d8362325d0c30c95a9bbc89cfb86 835 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 8 834 0.0 T 31-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 DY252_16885 9676d8362325d0c30c95a9bbc89cfb86 835 PIRSF PIRSF005496 3 835 0.0 T 31-10-2018 DY252_16885 9676d8362325d0c30c95a9bbc89cfb86 835 Pfam PF04408 Helicase associated domain (HA2) 398 459 2.5E-12 T 31-10-2018 IPR007502 Helicase-associated domain GO:0004386 DY252_05630 bf846d0c46a1d7f0520cb6c6c29ab3a7 179 SMART SM00530 47 105 5.5E-9 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_05630 bf846d0c46a1d7f0520cb6c6c29ab3a7 179 Pfam PF12844 Helix-turn-helix domain 45 106 4.9E-11 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_05630 bf846d0c46a1d7f0520cb6c6c29ab3a7 179 Gene3D G3DSA:1.10.260.40 40 108 1.8E-12 T 31-10-2018 DY252_05630 bf846d0c46a1d7f0520cb6c6c29ab3a7 179 SUPERFAMILY SSF47413 43 109 1.29E-11 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_02510 d5edd7ac62394be3c96f161d8353b461 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 9.9E-39 T 31-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_02510 d5edd7ac62394be3c96f161d8353b461 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 9.9E-39 T 31-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_02510 d5edd7ac62394be3c96f161d8353b461 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 9.9E-39 T 31-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_02510 d5edd7ac62394be3c96f161d8353b461 118 Gene3D G3DSA:1.10.720.90 2 55 5.4E-22 T 31-10-2018 DY252_02510 d5edd7ac62394be3c96f161d8353b461 118 Pfam PF00453 Ribosomal protein L20 3 109 1.4E-50 T 31-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_02510 d5edd7ac62394be3c96f161d8353b461 118 Gene3D G3DSA:1.10.1900.20 56 118 2.9E-31 T 31-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_02510 d5edd7ac62394be3c96f161d8353b461 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 3.0E-16 T 31-10-2018 DY252_02510 d5edd7ac62394be3c96f161d8353b461 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.372 T 31-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_02510 d5edd7ac62394be3c96f161d8353b461 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 113 3.2E-49 T 31-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_02510 d5edd7ac62394be3c96f161d8353b461 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 31-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_02510 d5edd7ac62394be3c96f161d8353b461 118 SUPERFAMILY SSF74731 3 117 3.14E-50 T 31-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_18410 6ad404420b51a28108360d917c525d24 220 SUPERFAMILY SSF52540 40 218 1.25E-38 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18410 6ad404420b51a28108360d917c525d24 220 Gene3D G3DSA:3.40.50.300 25 220 6.4E-58 T 31-10-2018 DY252_18410 6ad404420b51a28108360d917c525d24 220 Pfam PF01926 50S ribosome-binding GTPase 50 168 8.2E-22 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_18410 6ad404420b51a28108360d917c525d24 220 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 36 220 27.736 T 31-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 DY252_18410 6ad404420b51a28108360d917c525d24 220 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 32 216 4.6E-70 T 31-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 DY252_17635 a2b5f887f77edd07657bb6eff26fefc2 590 Pfam PF07196 Flagellin hook IN motif 156 210 1.1E-13 T 31-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 DY252_17635 a2b5f887f77edd07657bb6eff26fefc2 590 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 24 133 4.1E-15 T 31-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 DY252_17635 a2b5f887f77edd07657bb6eff26fefc2 590 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 250 573 1.1E-39 T 31-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 DY252_11665 32b51bac596bacf943a8496e8736089a 367 SMART SM00382 36 219 1.3E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_11665 32b51bac596bacf943a8496e8736089a 367 Gene3D G3DSA:2.40.50.140 247 288 2.1E-6 T 31-10-2018 DY252_11665 32b51bac596bacf943a8496e8736089a 367 Pfam PF00005 ABC transporter 28 169 9.5E-32 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_11665 32b51bac596bacf943a8496e8736089a 367 SUPERFAMILY SSF50331 244 364 4.76E-21 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_11665 32b51bac596bacf943a8496e8736089a 367 Gene3D G3DSA:2.40.50.100 289 353 2.1E-6 T 31-10-2018 DY252_11665 32b51bac596bacf943a8496e8736089a 367 Pfam PF08402 TOBE domain 286 364 2.0E-14 T 31-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DY252_11665 32b51bac596bacf943a8496e8736089a 367 SUPERFAMILY SSF52540 11 248 4.23E-84 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_11665 32b51bac596bacf943a8496e8736089a 367 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_11665 32b51bac596bacf943a8496e8736089a 367 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 42 362 2.1E-116 T 31-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 DY252_11665 32b51bac596bacf943a8496e8736089a 367 Gene3D G3DSA:3.40.50.300 4 246 1.2E-75 T 31-10-2018 DY252_15760 c11a64615114e857cea6cb7459fb9b1c 644 SUPERFAMILY SSF56235 1 229 9.44E-61 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_15760 c11a64615114e857cea6cb7459fb9b1c 644 Gene3D G3DSA:3.60.20.10 3 190 3.9E-63 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_15760 c11a64615114e857cea6cb7459fb9b1c 644 Pfam PF13537 Glutamine amidotransferase domain 52 172 1.7E-44 T 31-10-2018 IPR017932 Glutamine amidotransferase type 2 domain DY252_15760 c11a64615114e857cea6cb7459fb9b1c 644 SUPERFAMILY SSF52402 244 634 2.3E-89 T 31-10-2018 DY252_15760 c11a64615114e857cea6cb7459fb9b1c 644 Pfam PF00733 Asparagine synthase 252 639 2.4E-108 T 31-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 DY252_15760 c11a64615114e857cea6cb7459fb9b1c 644 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 575 9.9E-150 T 31-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DY252_15760 c11a64615114e857cea6cb7459fb9b1c 644 PIRSF PIRSF001589 1 644 8.0E-167 T 31-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DY252_07950 3b72da761c5a34acced41f0316bf78e6 518 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 264 279 - T 31-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_07950 3b72da761c5a34acced41f0316bf78e6 518 SUPERFAMILY SSF52833 4 91 4.47E-6 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_07950 3b72da761c5a34acced41f0316bf78e6 518 Gene3D G3DSA:3.40.50.11540 150 328 2.1E-71 T 31-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_07950 3b72da761c5a34acced41f0316bf78e6 518 SUPERFAMILY SSF142984 340 421 1.7E-20 T 31-10-2018 DY252_07950 3b72da761c5a34acced41f0316bf78e6 518 Gene3D G3DSA:1.20.1440.230 424 517 3.2E-25 T 31-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_07950 3b72da761c5a34acced41f0316bf78e6 518 Gene3D G3DSA:3.10.20.600 329 423 2.2E-22 T 31-10-2018 DY252_07950 3b72da761c5a34acced41f0316bf78e6 518 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 428 509 5.0E-30 T 31-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_07950 3b72da761c5a34acced41f0316bf78e6 518 SUPERFAMILY SSF140490 423 512 9.29E-30 T 31-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_07950 3b72da761c5a34acced41f0316bf78e6 518 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 145 316 1.1E-45 T 31-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_07950 3b72da761c5a34acced41f0316bf78e6 518 SUPERFAMILY SSF142019 97 337 1.2E-85 T 31-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_07950 3b72da761c5a34acced41f0316bf78e6 518 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 439 450 - T 31-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_07950 3b72da761c5a34acced41f0316bf78e6 518 SMART SM00928 426 471 2.7E-16 T 31-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_15535 c23453483db059f7942f97c31dadff7e 293 Gene3D G3DSA:3.90.550.10 1 293 4.5E-83 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_15535 c23453483db059f7942f97c31dadff7e 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 3 287 1.7E-143 T 31-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 DY252_15535 c23453483db059f7942f97c31dadff7e 293 SUPERFAMILY SSF53448 2 287 9.66E-87 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_15535 c23453483db059f7942f97c31dadff7e 293 Pfam PF00483 Nucleotidyl transferase 3 239 1.1E-66 T 31-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DY252_20855 cb0a1956c1b62cfc786c9dd72d08829f 64 SUPERFAMILY SSF55008 2 63 7.46E-17 T 31-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DY252_20855 cb0a1956c1b62cfc786c9dd72d08829f 64 Pfam PF00403 Heavy-metal-associated domain 3 59 5.0E-13 T 31-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DY252_20855 cb0a1956c1b62cfc786c9dd72d08829f 64 Gene3D G3DSA:3.30.70.100 1 61 1.3E-20 T 31-10-2018 DY252_05985 2f93733df207d06223e9f9b58b180ea4 445 Pfam PF05048 Periplasmic copper-binding protein (NosD) 145 370 2.5E-55 T 31-10-2018 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DY252_05985 2f93733df207d06223e9f9b58b180ea4 445 SMART SM00722 39 187 3.6E-16 T 31-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain DY252_05985 2f93733df207d06223e9f9b58b180ea4 445 SMART SM00722 193 354 6.6E-26 T 31-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain DY252_05985 2f93733df207d06223e9f9b58b180ea4 445 SUPERFAMILY SSF51126 30 396 1.84E-71 T 31-10-2018 IPR011050 Pectin lyase fold/virulence factor DY252_05985 2f93733df207d06223e9f9b58b180ea4 445 Gene3D G3DSA:2.160.20.10 62 180 3.9E-12 T 31-10-2018 IPR012334 Pectin lyase fold DY252_05985 2f93733df207d06223e9f9b58b180ea4 445 Gene3D G3DSA:2.160.20.10 181 357 3.2E-15 T 31-10-2018 IPR012334 Pectin lyase fold DY252_05985 2f93733df207d06223e9f9b58b180ea4 445 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 161 199 1.8E-5 T 31-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DY252_05985 2f93733df207d06223e9f9b58b180ea4 445 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 34 407 5.3E-137 T 31-10-2018 IPR026464 Nitrous oxide reductase family maturation protein NosD DY252_05985 2f93733df207d06223e9f9b58b180ea4 445 SMART SM00710 256 278 4100.0 T 31-10-2018 IPR006626 Parallel beta-helix repeat DY252_05985 2f93733df207d06223e9f9b58b180ea4 445 SMART SM00710 233 255 1700.0 T 31-10-2018 IPR006626 Parallel beta-helix repeat DY252_05985 2f93733df207d06223e9f9b58b180ea4 445 SMART SM00710 189 210 3400.0 T 31-10-2018 IPR006626 Parallel beta-helix repeat DY252_05985 2f93733df207d06223e9f9b58b180ea4 445 SMART SM00710 279 300 860.0 T 31-10-2018 IPR006626 Parallel beta-helix repeat DY252_05985 2f93733df207d06223e9f9b58b180ea4 445 SMART SM00710 167 188 7.5 T 31-10-2018 IPR006626 Parallel beta-helix repeat DY252_05985 2f93733df207d06223e9f9b58b180ea4 445 SMART SM00710 211 232 1800.0 T 31-10-2018 IPR006626 Parallel beta-helix repeat DY252_05985 2f93733df207d06223e9f9b58b180ea4 445 SMART SM00710 85 113 380.0 T 31-10-2018 IPR006626 Parallel beta-helix repeat DY252_05985 2f93733df207d06223e9f9b58b180ea4 445 SMART SM00710 137 166 330.0 T 31-10-2018 IPR006626 Parallel beta-helix repeat DY252_05985 2f93733df207d06223e9f9b58b180ea4 445 SMART SM00710 115 136 2.2 T 31-10-2018 IPR006626 Parallel beta-helix repeat DY252_13230 d28dadb5bf1356bcddee150e89ee61b8 631 SUPERFAMILY SSF54534 265 360 2.35E-15 T 31-10-2018 DY252_13230 d28dadb5bf1356bcddee150e89ee61b8 631 Pfam PF13624 SurA N-terminal domain 1 165 2.9E-41 T 31-10-2018 DY252_13230 d28dadb5bf1356bcddee150e89ee61b8 631 Gene3D G3DSA:1.10.4030.30 232 368 7.3E-21 T 31-10-2018 DY252_13230 d28dadb5bf1356bcddee150e89ee61b8 631 Gene3D G3DSA:3.10.50.40 269 359 7.3E-21 T 31-10-2018 DY252_13230 d28dadb5bf1356bcddee150e89ee61b8 631 SUPERFAMILY SSF109998 41 287 8.37E-26 T 31-10-2018 IPR027304 Trigger factor/SurA domain superfamily DY252_13230 d28dadb5bf1356bcddee150e89ee61b8 631 Gene3D G3DSA:1.10.4030.30 43 184 3.9E-10 T 31-10-2018 DY252_13230 d28dadb5bf1356bcddee150e89ee61b8 631 Pfam PF13145 PPIC-type PPIASE domain 249 371 3.5E-23 T 31-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 DY252_13230 d28dadb5bf1356bcddee150e89ee61b8 631 Pfam PF13145 PPIC-type PPIASE domain 390 481 6.2E-7 T 31-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 DY252_09495 ac9f405c535c01cd004a3e8cd838604b 304 Gene3D G3DSA:3.40.190.10 101 294 2.4E-44 T 31-10-2018 DY252_09495 ac9f405c535c01cd004a3e8cd838604b 304 Gene3D G3DSA:1.10.10.10 3 88 1.2E-25 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_09495 ac9f405c535c01cd004a3e8cd838604b 304 SUPERFAMILY SSF53850 91 297 1.01E-25 T 31-10-2018 DY252_09495 ac9f405c535c01cd004a3e8cd838604b 304 SUPERFAMILY SSF46785 8 87 1.33E-19 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_09495 ac9f405c535c01cd004a3e8cd838604b 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 2.5E-18 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_09495 ac9f405c535c01cd004a3e8cd838604b 304 Gene3D G3DSA:3.40.190.10 176 271 2.4E-44 T 31-10-2018 DY252_09495 ac9f405c535c01cd004a3e8cd838604b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 2.4E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_09495 ac9f405c535c01cd004a3e8cd838604b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 2.4E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_09495 ac9f405c535c01cd004a3e8cd838604b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.4E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_09495 ac9f405c535c01cd004a3e8cd838604b 304 Pfam PF03466 LysR substrate binding domain 101 296 1.1E-14 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_18680 a1a88f1b6cc7339a8fe152264e3a8520 495 Gene3D G3DSA:3.40.309.10 274 461 7.0E-179 T 31-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DY252_18680 a1a88f1b6cc7339a8fe152264e3a8520 495 Pfam PF00171 Aldehyde dehydrogenase family 32 489 2.2E-168 T 31-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DY252_18680 a1a88f1b6cc7339a8fe152264e3a8520 495 Gene3D G3DSA:3.40.605.10 39 484 7.0E-179 T 31-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_18680 a1a88f1b6cc7339a8fe152264e3a8520 495 SUPERFAMILY SSF53720 18 491 3.14E-165 T 31-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DY252_18680 a1a88f1b6cc7339a8fe152264e3a8520 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 31-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DY252_16320 c60d168f5f0f82b35700eadfa96cc8a0 303 TIGRFAM TIGR03249 KdgD: 5-dehydro-4-deoxyglucarate dehydratase 1 294 1.7E-127 T 31-10-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 DY252_16320 c60d168f5f0f82b35700eadfa96cc8a0 303 Hamap MF_00694 Probable 5-dehydro-4-deoxyglucarate dehydratase. 5 295 42.735 T 31-10-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 DY252_16320 c60d168f5f0f82b35700eadfa96cc8a0 303 SUPERFAMILY SSF51569 8 293 6.59E-67 T 31-10-2018 DY252_16320 c60d168f5f0f82b35700eadfa96cc8a0 303 PIRSF PIRSF001365 1 301 9.8E-57 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_16320 c60d168f5f0f82b35700eadfa96cc8a0 303 Gene3D G3DSA:3.20.20.70 1 300 1.0E-101 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_16320 c60d168f5f0f82b35700eadfa96cc8a0 303 SMART SM01130 5 295 2.1E-73 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_16320 c60d168f5f0f82b35700eadfa96cc8a0 303 Pfam PF00701 Dihydrodipicolinate synthetase family 7 293 9.6E-46 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_10155 a1119aa035a0d8a9c77358b38dc817b2 228 SMART SM00901 18 115 6.1E-33 T 31-10-2018 IPR014966 FRG domain DY252_10155 a1119aa035a0d8a9c77358b38dc817b2 228 Pfam PF08867 FRG domain 26 110 1.4E-24 T 31-10-2018 IPR014966 FRG domain DY252_13600 0f0fb175b5fe56f4b7c2c0caba1a7f22 530 Gene3D G3DSA:1.25.40.80 135 322 5.8E-121 T 31-10-2018 DY252_13600 0f0fb175b5fe56f4b7c2c0caba1a7f22 530 SUPERFAMILY SSF48173 232 494 7.59E-60 T 31-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 DY252_13600 0f0fb175b5fe56f4b7c2c0caba1a7f22 530 Gene3D G3DSA:1.10.579.10 326 446 1.0E-53 T 31-10-2018 DY252_13600 0f0fb175b5fe56f4b7c2c0caba1a7f22 530 Gene3D G3DSA:1.10.10.1710 447 520 1.3E-26 T 31-10-2018 DY252_13600 0f0fb175b5fe56f4b7c2c0caba1a7f22 530 Gene3D G3DSA:3.40.50.620 11 233 5.8E-121 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_13600 0f0fb175b5fe56f4b7c2c0caba1a7f22 530 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 9 231 2.1E-79 T 31-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein DY252_21560 829ffcd67b4bd6ee385c9f047ebbf96f 495 SMART SM00267 324 495 3.8E-54 T 31-10-2018 IPR000160 GGDEF domain DY252_21560 829ffcd67b4bd6ee385c9f047ebbf96f 495 Pfam PF00990 Diguanylate cyclase, GGDEF domain 335 490 3.4E-41 T 31-10-2018 IPR000160 GGDEF domain DY252_21560 829ffcd67b4bd6ee385c9f047ebbf96f 495 SUPERFAMILY SSF55073 340 492 1.65E-43 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_21560 829ffcd67b4bd6ee385c9f047ebbf96f 495 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 331 493 5.9E-44 T 31-10-2018 IPR000160 GGDEF domain DY252_21560 829ffcd67b4bd6ee385c9f047ebbf96f 495 Gene3D G3DSA:3.30.70.270 324 495 5.8E-53 T 31-10-2018 DY252_21560 829ffcd67b4bd6ee385c9f047ebbf96f 495 SUPERFAMILY SSF103190 80 205 3.53E-6 T 31-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DY252_21560 829ffcd67b4bd6ee385c9f047ebbf96f 495 Pfam PF02743 Cache domain 55 287 5.3E-14 T 31-10-2018 IPR033479 Double Cache domain 1 DY252_03305 83166fd9878de9948bafaf84d6c30961 224 Pfam PF00005 ABC transporter 20 160 5.6E-26 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_03305 83166fd9878de9948bafaf84d6c30961 224 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_03305 83166fd9878de9948bafaf84d6c30961 224 Gene3D G3DSA:3.40.50.300 1 224 1.8E-62 T 31-10-2018 DY252_03305 83166fd9878de9948bafaf84d6c30961 224 SUPERFAMILY SSF52540 2 213 4.19E-54 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_03305 83166fd9878de9948bafaf84d6c30961 224 SMART SM00382 25 205 2.7E-11 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_18030 607cfa3c3e1d6986f500db51532243ba 422 Pfam PF11902 Protein of unknown function (DUF3422) 4 416 1.3E-165 T 31-10-2018 IPR021830 Protein of unknown function DUF3422 DY252_11915 b8dcbe19f9042af14a5683ca0ea1905d 378 Pfam PF05036 Sporulation related domain 295 375 8.6E-12 T 31-10-2018 IPR007730 Sporulation-like domain GO:0042834 DY252_11915 b8dcbe19f9042af14a5683ca0ea1905d 378 SUPERFAMILY SSF110997 293 376 2.35E-8 T 31-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DY252_09245 c1c44712267b9ac8b3f82ff59b1b296c 473 Gene3D G3DSA:1.10.45.10 430 470 5.7E-10 T 31-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DY252_09245 c1c44712267b9ac8b3f82ff59b1b296c 473 Gene3D G3DSA:3.30.43.10 1 95 4.1E-24 T 31-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DY252_09245 c1c44712267b9ac8b3f82ff59b1b296c 473 Pfam PF01565 FAD binding domain 44 178 1.3E-37 T 31-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DY252_09245 c1c44712267b9ac8b3f82ff59b1b296c 473 SUPERFAMILY SSF56176 6 219 4.11E-72 T 31-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DY252_09245 c1c44712267b9ac8b3f82ff59b1b296c 473 Gene3D G3DSA:3.30.70.2190 219 342 4.4E-35 T 31-10-2018 DY252_09245 c1c44712267b9ac8b3f82ff59b1b296c 473 SUPERFAMILY SSF55103 222 470 1.8E-53 T 31-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DY252_09245 c1c44712267b9ac8b3f82ff59b1b296c 473 Gene3D G3DSA:3.30.70.2740 343 429 4.8E-29 T 31-10-2018 DY252_09245 c1c44712267b9ac8b3f82ff59b1b296c 473 Gene3D G3DSA:3.30.465.10 97 218 9.5E-47 T 31-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DY252_09245 c1c44712267b9ac8b3f82ff59b1b296c 473 Pfam PF02913 FAD linked oxidases, C-terminal domain 219 469 1.9E-50 T 31-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DY252_03205 f67675113acd3e666858cd691d2e623a 345 SUPERFAMILY SSF52768 3 341 2.4E-81 T 31-10-2018 IPR023696 Ureohydrolase domain superfamily DY252_03205 f67675113acd3e666858cd691d2e623a 345 Gene3D G3DSA:3.40.800.20 1 341 1.3E-114 T 31-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_03205 f67675113acd3e666858cd691d2e623a 345 PRINTS PR01270 Histone deacetylase superfamily signature 188 203 4.8E-12 T 31-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_03205 f67675113acd3e666858cd691d2e623a 345 PRINTS PR01270 Histone deacetylase superfamily signature 155 178 4.8E-12 T 31-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_03205 f67675113acd3e666858cd691d2e623a 345 PRINTS PR01270 Histone deacetylase superfamily signature 274 284 4.8E-12 T 31-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_03205 f67675113acd3e666858cd691d2e623a 345 Pfam PF00850 Histone deacetylase domain 28 337 6.6E-66 T 31-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_02505 9e15820a6e2fde975b22f47e493c9443 65 Gene3D G3DSA:2.40.50.530 1 64 1.9E-23 T 31-10-2018 DY252_02505 9e15820a6e2fde975b22f47e493c9443 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 3.7E-22 T 31-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DY252_02505 9e15820a6e2fde975b22f47e493c9443 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 31-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_02505 9e15820a6e2fde975b22f47e493c9443 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 5.3E-14 T 31-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DY252_02505 9e15820a6e2fde975b22f47e493c9443 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 5.3E-14 T 31-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DY252_02505 9e15820a6e2fde975b22f47e493c9443 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 5.3E-14 T 31-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DY252_02505 9e15820a6e2fde975b22f47e493c9443 65 SUPERFAMILY SSF143034 2 64 1.29E-21 T 31-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_02505 9e15820a6e2fde975b22f47e493c9443 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.447 T 31-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DY252_02505 9e15820a6e2fde975b22f47e493c9443 65 Pfam PF01632 Ribosomal protein L35 2 62 9.2E-22 T 31-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_07810 ade9f408d4769ec4f6d3a73664b867d1 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 250 1.8E-52 T 31-10-2018 DY252_07810 ade9f408d4769ec4f6d3a73664b867d1 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_07810 ade9f408d4769ec4f6d3a73664b867d1 252 Gene3D G3DSA:3.40.50.720 1 251 4.9E-73 T 31-10-2018 DY252_07810 ade9f408d4769ec4f6d3a73664b867d1 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 175 0.007 T 31-10-2018 DY252_07810 ade9f408d4769ec4f6d3a73664b867d1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.9E-36 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07810 ade9f408d4769ec4f6d3a73664b867d1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.9E-36 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07810 ade9f408d4769ec4f6d3a73664b867d1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.9E-36 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07810 ade9f408d4769ec4f6d3a73664b867d1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.9E-36 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07810 ade9f408d4769ec4f6d3a73664b867d1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.9E-36 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07810 ade9f408d4769ec4f6d3a73664b867d1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.9E-36 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07810 ade9f408d4769ec4f6d3a73664b867d1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 8.8E-8 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07810 ade9f408d4769ec4f6d3a73664b867d1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 8.8E-8 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07810 ade9f408d4769ec4f6d3a73664b867d1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 8.8E-8 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07810 ade9f408d4769ec4f6d3a73664b867d1 252 SUPERFAMILY SSF51735 8 250 3.43E-71 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_02415 52bbf11292fdd30ae35c389c0059426f 478 Gene3D G3DSA:3.10.180.80 12 461 4.0E-189 T 31-10-2018 DY252_02415 52bbf11292fdd30ae35c389c0059426f 478 SMART SM01150 21 424 2.0E-224 T 31-10-2018 IPR009770 Domain of unknown function DUF1338 DY252_02415 52bbf11292fdd30ae35c389c0059426f 478 Pfam PF07063 Domain of unknown function (DUF1338) 19 424 1.4E-118 T 31-10-2018 IPR009770 Domain of unknown function DUF1338 DY252_06105 616a7d21e07dba871330d352667f549e 276 Pfam PF01418 Helix-turn-helix domain, rpiR family 20 86 8.5E-10 T 31-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DY252_06105 616a7d21e07dba871330d352667f549e 276 Pfam PF01380 SIS domain 140 263 4.2E-14 T 31-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DY252_06105 616a7d21e07dba871330d352667f549e 276 SUPERFAMILY SSF53697 120 263 1.25E-19 T 31-10-2018 DY252_06105 616a7d21e07dba871330d352667f549e 276 Gene3D G3DSA:1.10.10.10 10 86 8.5E-14 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_06105 616a7d21e07dba871330d352667f549e 276 SUPERFAMILY SSF46689 13 89 1.68E-14 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_06105 616a7d21e07dba871330d352667f549e 276 Gene3D G3DSA:3.40.50.10490 108 274 9.3E-23 T 31-10-2018 DY252_11040 82eef0e8c3f248a2ec49ecdfb4bf9c5b 437 Gene3D G3DSA:3.30.9.10 93 265 6.8E-66 T 31-10-2018 DY252_11040 82eef0e8c3f248a2ec49ecdfb4bf9c5b 437 Gene3D G3DSA:3.50.50.60 14 228 6.8E-66 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_11040 82eef0e8c3f248a2ec49ecdfb4bf9c5b 437 Gene3D G3DSA:3.30.9.10 331 367 4.8E-22 T 31-10-2018 DY252_11040 82eef0e8c3f248a2ec49ecdfb4bf9c5b 437 SUPERFAMILY SSF51905 13 431 1.23E-58 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_11040 82eef0e8c3f248a2ec49ecdfb4bf9c5b 437 Pfam PF01266 FAD dependent oxidoreductase 14 407 7.0E-68 T 31-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DY252_11040 82eef0e8c3f248a2ec49ecdfb4bf9c5b 437 Gene3D G3DSA:3.50.50.60 368 420 4.8E-22 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_09890 cfdc3175cccead9bbd3fd9545d62681a 266 SUPERFAMILY SSF53187 9 256 4.71E-70 T 31-10-2018 DY252_09890 cfdc3175cccead9bbd3fd9545d62681a 266 Pfam PF05013 N-formylglutamate amidohydrolase 29 234 2.3E-41 T 31-10-2018 IPR007709 N-formylglutamate amidohydrolase DY252_09890 cfdc3175cccead9bbd3fd9545d62681a 266 PIRSF PIRSF029730 4 264 2.4E-93 T 31-10-2018 IPR011227 Uncharacterised conserved protein UCP029730 DY252_09890 cfdc3175cccead9bbd3fd9545d62681a 266 Gene3D G3DSA:3.40.630.40 17 259 4.6E-82 T 31-10-2018 DY252_20415 be9eeaaed6540fa5fd2a54fa0f3c7bd8 211 SUPERFAMILY SSF88946 39 135 1.35E-24 T 31-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DY252_20415 be9eeaaed6540fa5fd2a54fa0f3c7bd8 211 Pfam PF04542 Sigma-70 region 2 54 121 2.4E-19 T 31-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DY252_20415 be9eeaaed6540fa5fd2a54fa0f3c7bd8 211 Pfam PF08281 Sigma-70, region 4 153 203 4.1E-16 T 31-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DY252_20415 be9eeaaed6540fa5fd2a54fa0f3c7bd8 211 Gene3D G3DSA:1.10.10.10 119 209 1.5E-22 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_20415 be9eeaaed6540fa5fd2a54fa0f3c7bd8 211 SUPERFAMILY SSF88659 146 207 7.29E-16 T 31-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DY252_20415 be9eeaaed6540fa5fd2a54fa0f3c7bd8 211 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 204 2.9E-30 T 31-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DY252_20415 be9eeaaed6540fa5fd2a54fa0f3c7bd8 211 Gene3D G3DSA:1.10.1740.10 36 118 4.3E-28 T 31-10-2018 DY252_06925 01d1645c70b03715832dcb635e9c194c 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 6.8E-28 T 31-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 DY252_06925 01d1645c70b03715832dcb635e9c194c 72 Gene3D G3DSA:2.40.50.140 1 72 9.7E-38 T 31-10-2018 DY252_06925 01d1645c70b03715832dcb635e9c194c 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.209 T 31-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DY252_06925 01d1645c70b03715832dcb635e9c194c 72 SUPERFAMILY SSF50249 1 71 2.0E-28 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_06925 01d1645c70b03715832dcb635e9c194c 72 SMART SM00316 4 72 2.6E-5 T 31-10-2018 IPR022967 RNA-binding domain, S1 DY252_06925 01d1645c70b03715832dcb635e9c194c 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 3.9E-36 T 31-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DY252_10380 492b43e4c4eb4b3512dc29e31fc2c3b1 317 Gene3D G3DSA:1.10.10.10 11 97 1.5E-20 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_10380 492b43e4c4eb4b3512dc29e31fc2c3b1 317 SUPERFAMILY SSF53850 97 301 9.23E-25 T 31-10-2018 DY252_10380 492b43e4c4eb4b3512dc29e31fc2c3b1 317 SUPERFAMILY SSF46785 12 97 3.93E-18 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_10380 492b43e4c4eb4b3512dc29e31fc2c3b1 317 Pfam PF03466 LysR substrate binding domain 100 300 6.2E-23 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_10380 492b43e4c4eb4b3512dc29e31fc2c3b1 317 Gene3D G3DSA:3.40.190.290 101 306 1.9E-17 T 31-10-2018 DY252_10380 492b43e4c4eb4b3512dc29e31fc2c3b1 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 8.2E-17 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_07050 edceb4d57e9698fc3f629981ac97bc15 229 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 226 43.229 T 31-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DY252_07050 edceb4d57e9698fc3f629981ac97bc15 229 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 211 4.2E-40 T 31-10-2018 DY252_07050 edceb4d57e9698fc3f629981ac97bc15 229 PIRSF PIRSF001586 1 229 8.3E-86 T 31-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DY252_07050 edceb4d57e9698fc3f629981ac97bc15 229 Gene3D G3DSA:3.40.50.880 1 229 1.0E-63 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_07050 edceb4d57e9698fc3f629981ac97bc15 229 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 227 6.2E-96 T 31-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DY252_07050 edceb4d57e9698fc3f629981ac97bc15 229 SMART SM01211 1 228 1.3E-126 T 31-10-2018 DY252_07050 edceb4d57e9698fc3f629981ac97bc15 229 SUPERFAMILY SSF52317 1 227 1.67E-71 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_20760 df948857f0539955c27e73ee20980d71 218 SMART SM00448 14 128 2.9E-12 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_20760 df948857f0539955c27e73ee20980d71 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 9.8E-17 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_20760 df948857f0539955c27e73ee20980d71 218 SUPERFAMILY SSF52172 15 136 1.07E-19 T 31-10-2018 IPR011006 CheY-like superfamily DY252_20760 df948857f0539955c27e73ee20980d71 218 Gene3D G3DSA:3.40.50.2300 12 141 1.0E-20 T 31-10-2018 DY252_20760 df948857f0539955c27e73ee20980d71 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 1.2E-10 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_20760 df948857f0539955c27e73ee20980d71 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 1.2E-10 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_20760 df948857f0539955c27e73ee20980d71 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 1.2E-10 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_20760 df948857f0539955c27e73ee20980d71 218 SUPERFAMILY SSF46894 149 215 1.56E-18 T 31-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DY252_20760 df948857f0539955c27e73ee20980d71 218 Gene3D G3DSA:1.10.10.10 142 218 1.6E-20 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_20760 df948857f0539955c27e73ee20980d71 218 SMART SM00421 156 213 3.4E-19 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_20760 df948857f0539955c27e73ee20980d71 218 Pfam PF00072 Response regulator receiver domain 16 126 3.3E-16 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_07915 755ebf5666889cea4f5e2e27739c2b72 252 Gene3D G3DSA:3.40.50.720 2 237 4.5E-63 T 31-10-2018 DY252_07915 755ebf5666889cea4f5e2e27739c2b72 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 3.7E-9 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07915 755ebf5666889cea4f5e2e27739c2b72 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 3.7E-9 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07915 755ebf5666889cea4f5e2e27739c2b72 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 3.7E-9 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07915 755ebf5666889cea4f5e2e27739c2b72 252 SUPERFAMILY SSF51735 3 235 1.46E-60 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_07915 755ebf5666889cea4f5e2e27739c2b72 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_07915 755ebf5666889cea4f5e2e27739c2b72 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 185 0.0084 T 31-10-2018 DY252_07915 755ebf5666889cea4f5e2e27739c2b72 252 Pfam PF00106 short chain dehydrogenase 3 187 1.5E-50 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07915 755ebf5666889cea4f5e2e27739c2b72 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.1E-23 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07915 755ebf5666889cea4f5e2e27739c2b72 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.1E-23 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07915 755ebf5666889cea4f5e2e27739c2b72 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 1.1E-23 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07915 755ebf5666889cea4f5e2e27739c2b72 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.1E-23 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07915 755ebf5666889cea4f5e2e27739c2b72 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-23 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_21850 0ac787e7ab208e83fbfe0540611f423b 431 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 7 423 7.8E-198 T 31-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DY252_21850 0ac787e7ab208e83fbfe0540611f423b 431 SMART SM00996 6 430 0.0 T 31-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DY252_21850 0ac787e7ab208e83fbfe0540611f423b 431 Gene3D G3DSA:3.40.50.720 199 346 1.1E-74 T 31-10-2018 DY252_21850 0ac787e7ab208e83fbfe0540611f423b 431 SUPERFAMILY SSF51735 192 351 9.65E-80 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_21850 0ac787e7ab208e83fbfe0540611f423b 431 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 6 142 5.7E-74 T 31-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DY252_21850 0ac787e7ab208e83fbfe0540611f423b 431 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 2 423 50.174 T 31-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 DY252_21850 0ac787e7ab208e83fbfe0540611f423b 431 SMART SM00997 192 351 3.6E-113 T 31-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DY252_21850 0ac787e7ab208e83fbfe0540611f423b 431 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 192 351 8.2E-83 T 31-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DY252_21850 0ac787e7ab208e83fbfe0540611f423b 431 PIRSF PIRSF001109 1 431 1.1E-201 T 31-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DY252_21850 0ac787e7ab208e83fbfe0540611f423b 431 SUPERFAMILY SSF52283 4 431 5.27E-124 T 31-10-2018 DY252_21850 0ac787e7ab208e83fbfe0540611f423b 431 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 78 92 - T 31-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DY252_21850 0ac787e7ab208e83fbfe0540611f423b 431 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 214 231 - T 31-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DY252_21850 0ac787e7ab208e83fbfe0540611f423b 431 Gene3D G3DSA:3.40.50.1480 347 431 5.5E-42 T 31-10-2018 DY252_21850 0ac787e7ab208e83fbfe0540611f423b 431 Gene3D G3DSA:3.40.50.1480 4 198 6.2E-99 T 31-10-2018 DY252_21115 91a001ddf66da33f698ceeabea3361a5 382 Pfam PF12686 Protein of unknown function (DUF3800) 237 328 5.2E-6 T 31-10-2018 IPR024524 Protein of unknown function DUF3800 DY252_11880 415123930723f59cb3ba6a550f0453ed 176 SUPERFAMILY SSF53218 7 172 7.2E-47 T 31-10-2018 IPR036425 MoaB/Mog-like domain superfamily DY252_11880 415123930723f59cb3ba6a550f0453ed 176 Pfam PF00994 Probable molybdopterin binding domain 16 156 1.6E-32 T 31-10-2018 IPR001453 MoaB/Mog domain DY252_11880 415123930723f59cb3ba6a550f0453ed 176 PIRSF PIRSF006443 2 168 3.2E-60 T 31-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 DY252_11880 415123930723f59cb3ba6a550f0453ed 176 Gene3D G3DSA:3.40.980.10 4 173 2.6E-47 T 31-10-2018 IPR036425 MoaB/Mog-like domain superfamily DY252_11880 415123930723f59cb3ba6a550f0453ed 176 SMART SM00852 16 160 2.8E-28 T 31-10-2018 IPR001453 MoaB/Mog domain DY252_11880 415123930723f59cb3ba6a550f0453ed 176 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 74 87 - T 31-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 DY252_11880 415123930723f59cb3ba6a550f0453ed 176 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 13 152 3.5E-33 T 31-10-2018 IPR001453 MoaB/Mog domain DY252_11880 415123930723f59cb3ba6a550f0453ed 176 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 10 171 3.0E-73 T 31-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 DY252_04430 ea9a2968d07ea215a037ac683c82ac5f 296 SUPERFAMILY SSF52141 112 295 1.96E-59 T 31-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DY252_04430 ea9a2968d07ea215a037ac683c82ac5f 296 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 126 294 7.7E-64 T 31-10-2018 IPR005273 Uracil-DNA glycosylase family 4 DY252_04430 ea9a2968d07ea215a037ac683c82ac5f 296 Gene3D G3DSA:3.40.470.10 98 296 3.4E-65 T 31-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DY252_04430 ea9a2968d07ea215a037ac683c82ac5f 296 SMART SM00987 139 290 2.0E-40 T 31-10-2018 DY252_04430 ea9a2968d07ea215a037ac683c82ac5f 296 SMART SM00986 139 290 2.0E-40 T 31-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DY252_04430 ea9a2968d07ea215a037ac683c82ac5f 296 Pfam PF03167 Uracil DNA glycosylase superfamily 139 290 2.7E-43 T 31-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 Pfam PF14492 Elongation Factor G, domain II 404 477 1.2E-33 T 31-10-2018 DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 Pfam PF00679 Elongation factor G C-terminus 601 686 9.8E-30 T 31-10-2018 IPR000640 Elongation factor EFG, domain V-like DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 31-10-2018 IPR031157 Tr-type G domain, conserved site DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 SMART SM00838 600 687 7.1E-53 T 31-10-2018 IPR000640 Elongation factor EFG, domain V-like DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 SUPERFAMILY SSF54980 603 687 4.8E-28 T 31-10-2018 IPR035647 EF-G domain III/V-like DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 Gene3D G3DSA:3.30.70.240 604 674 1.1E-88 T 31-10-2018 DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 Gene3D G3DSA:3.40.50.300 2 291 1.3E-112 T 31-10-2018 DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 Hamap MF_00054_B Elongation factor G [fusA]. 6 691 112.13 T 31-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 Gene3D G3DSA:3.30.230.10 484 687 1.1E-88 T 31-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 Gene3D G3DSA:2.40.30.10 292 400 6.8E-42 T 31-10-2018 DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 Pfam PF03764 Elongation factor G, domain IV 479 598 1.1E-44 T 31-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 SUPERFAMILY SSF50447 264 404 2.78E-35 T 31-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 SUPERFAMILY SSF54980 402 480 3.24E-24 T 31-10-2018 IPR035647 EF-G domain III/V-like DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 Gene3D G3DSA:3.30.70.870 405 483 3.4E-32 T 31-10-2018 DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 2.4E-69 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 Pfam PF03144 Elongation factor Tu domain 2 324 391 8.5E-14 T 31-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 691 0.0 T 31-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 1.1E-34 T 31-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 SUPERFAMILY SSF54211 479 599 9.1E-42 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 SMART SM00889 480 598 1.5E-66 T 31-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 PRINTS PR00315 GTP-binding elongation factor signature 78 88 6.2E-15 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 PRINTS PR00315 GTP-binding elongation factor signature 58 66 6.2E-15 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 PRINTS PR00315 GTP-binding elongation factor signature 94 105 6.2E-15 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 PRINTS PR00315 GTP-binding elongation factor signature 12 25 6.2E-15 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 PRINTS PR00315 GTP-binding elongation factor signature 130 139 6.2E-15 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_08955 5fbc377b4d2af8d9c5ebb58e36fb47b2 693 SUPERFAMILY SSF52540 6 280 9.46E-110 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_13455 9becce9c18e6e1cc471ced74944dece7 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 140 3.4E-53 T 31-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13455 9becce9c18e6e1cc471ced74944dece7 162 SUPERFAMILY SSF54862 36 146 8.37E-29 T 31-10-2018 DY252_13455 9becce9c18e6e1cc471ced74944dece7 162 Gene3D G3DSA:3.30.70.3270 36 161 2.2E-43 T 31-10-2018 DY252_13455 9becce9c18e6e1cc471ced74944dece7 162 Pfam PF12838 4Fe-4S dicluster domain 62 116 1.5E-12 T 31-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DY252_13455 9becce9c18e6e1cc471ced74944dece7 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 31-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DY252_13455 9becce9c18e6e1cc471ced74944dece7 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 159 29.482 T 31-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13580 c2dfdc0a6267a991a365e07787d88d7f 129 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 125 9.8E-52 T 31-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 DY252_13580 c2dfdc0a6267a991a365e07787d88d7f 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.7E-7 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_13580 c2dfdc0a6267a991a365e07787d88d7f 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 4.7E-7 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_13580 c2dfdc0a6267a991a365e07787d88d7f 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.7E-7 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_13580 c2dfdc0a6267a991a365e07787d88d7f 129 Pfam PF00376 MerR family regulatory protein 2 38 2.1E-13 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_13580 c2dfdc0a6267a991a365e07787d88d7f 129 Gene3D G3DSA:1.10.1660.10 1 124 1.1E-35 T 31-10-2018 DY252_13580 c2dfdc0a6267a991a365e07787d88d7f 129 Pfam PF09278 MerR, DNA binding 43 107 3.4E-20 T 31-10-2018 IPR015358 Transcription regulator MerR, DNA binding DY252_13580 c2dfdc0a6267a991a365e07787d88d7f 129 SUPERFAMILY SSF46955 1 125 5.86E-37 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_13580 c2dfdc0a6267a991a365e07787d88d7f 129 SMART SM00422 1 69 1.2E-26 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_02220 9badea6effdf4d351a32fb9bdc9b5878 297 SUPERFAMILY SSF46689 184 235 5.82E-8 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_02220 9badea6effdf4d351a32fb9bdc9b5878 297 SMART SM00342 201 283 1.8E-14 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_02220 9badea6effdf4d351a32fb9bdc9b5878 297 Gene3D G3DSA:1.10.10.60 185 289 6.0E-16 T 31-10-2018 DY252_02220 9badea6effdf4d351a32fb9bdc9b5878 297 Pfam PF12852 Cupin 12 168 6.0E-17 T 31-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain DY252_02220 9badea6effdf4d351a32fb9bdc9b5878 297 Pfam PF12833 Helix-turn-helix domain 208 282 1.8E-13 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_21705 d5fd35673c7e9f7daa35d85810034ec6 222 SUPERFAMILY SSF47616 75 213 1.95E-16 T 31-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DY252_21705 d5fd35673c7e9f7daa35d85810034ec6 222 Gene3D G3DSA:1.20.1050.10 85 204 9.3E-40 T 31-10-2018 DY252_21705 d5fd35673c7e9f7daa35d85810034ec6 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 83 4.6E-17 T 31-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DY252_21705 d5fd35673c7e9f7daa35d85810034ec6 222 SUPERFAMILY SSF52833 4 81 2.15E-16 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_21705 d5fd35673c7e9f7daa35d85810034ec6 222 Gene3D G3DSA:3.40.30.10 7 208 9.3E-40 T 31-10-2018 DY252_04895 f3460b3eb7278d0a49d283cac282b5bc 316 SUPERFAMILY SSF81345 13 283 4.32E-22 T 31-10-2018 IPR037294 ABC transporter, BtuC-like DY252_04895 f3460b3eb7278d0a49d283cac282b5bc 316 Pfam PF00950 ABC 3 transport family 167 299 7.9E-19 T 31-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DY252_04895 f3460b3eb7278d0a49d283cac282b5bc 316 Pfam PF00950 ABC 3 transport family 21 138 4.2E-21 T 31-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DY252_02015 1e6231756608ec1ad0d3a8542c14e471 429 SUPERFAMILY SSF53623 7 286 2.29E-82 T 31-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DY252_02015 1e6231756608ec1ad0d3a8542c14e471 429 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 136 151 - T 31-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 DY252_02015 1e6231756608ec1ad0d3a8542c14e471 429 TIGRFAM TIGR01499 folC: bifunctional protein FolC 23 426 2.2E-104 T 31-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 DY252_02015 1e6231756608ec1ad0d3a8542c14e471 429 PIRSF PIRSF001563 4 429 3.4E-104 T 31-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 DY252_02015 1e6231756608ec1ad0d3a8542c14e471 429 Gene3D G3DSA:3.90.190.20 299 427 2.7E-17 T 31-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DY252_02015 1e6231756608ec1ad0d3a8542c14e471 429 Gene3D G3DSA:3.40.1190.10 2 287 5.9E-86 T 31-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DY252_02015 1e6231756608ec1ad0d3a8542c14e471 429 Pfam PF08245 Mur ligase middle domain 46 260 2.5E-8 T 31-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DY252_02015 1e6231756608ec1ad0d3a8542c14e471 429 SUPERFAMILY SSF53244 286 425 4.58E-21 T 31-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DY252_16030 55d90f90572b9c9f39f03851cddb7ff8 518 Pfam PF01266 FAD dependent oxidoreductase 8 330 3.1E-48 T 31-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DY252_16030 55d90f90572b9c9f39f03851cddb7ff8 518 SUPERFAMILY SSF54373 233 325 1.02E-5 T 31-10-2018 DY252_16030 55d90f90572b9c9f39f03851cddb7ff8 518 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 30 1.3E-28 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_16030 55d90f90572b9c9f39f03851cddb7ff8 518 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 319 325 1.3E-28 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_16030 55d90f90572b9c9f39f03851cddb7ff8 518 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 36 48 1.3E-28 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_16030 55d90f90572b9c9f39f03851cddb7ff8 518 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 81 93 1.3E-28 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_16030 55d90f90572b9c9f39f03851cddb7ff8 518 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 356 368 1.3E-28 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_16030 55d90f90572b9c9f39f03851cddb7ff8 518 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 7 19 1.3E-28 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_16030 55d90f90572b9c9f39f03851cddb7ff8 518 SUPERFAMILY SSF51905 5 380 5.67E-39 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_16030 55d90f90572b9c9f39f03851cddb7ff8 518 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 390 495 2.9E-10 T 31-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_16030 55d90f90572b9c9f39f03851cddb7ff8 518 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 361 371 - T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_16030 55d90f90572b9c9f39f03851cddb7ff8 518 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 12 29 - T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_16030 55d90f90572b9c9f39f03851cddb7ff8 518 Gene3D G3DSA:3.30.9.10 85 326 3.7E-136 T 31-10-2018 DY252_16030 55d90f90572b9c9f39f03851cddb7ff8 518 Gene3D G3DSA:3.50.50.60 8 375 3.7E-136 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_16030 55d90f90572b9c9f39f03851cddb7ff8 518 Gene3D G3DSA:1.10.8.870 402 471 1.7E-22 T 31-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_10720 2dca5330feae4a7262513eb890725ae1 473 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 467 4.5E-33 T 31-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DY252_10720 2dca5330feae4a7262513eb890725ae1 473 Gene3D G3DSA:2.40.33.10 73 169 3.4E-172 T 31-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DY252_10720 2dca5330feae4a7262513eb890725ae1 473 ProSitePatterns PS00110 Pyruvate kinase active site signature. 212 224 - T 31-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DY252_10720 2dca5330feae4a7262513eb890725ae1 473 Pfam PF00224 Pyruvate kinase, barrel domain 5 334 1.4E-118 T 31-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DY252_10720 2dca5330feae4a7262513eb890725ae1 473 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 468 2.0E-157 T 31-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DY252_10720 2dca5330feae4a7262513eb890725ae1 473 SUPERFAMILY SSF50800 73 168 9.94E-28 T 31-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily DY252_10720 2dca5330feae4a7262513eb890725ae1 473 PRINTS PR01050 Pyruvate kinase family signature 291 309 2.0E-67 T 31-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DY252_10720 2dca5330feae4a7262513eb890725ae1 473 PRINTS PR01050 Pyruvate kinase family signature 187 201 2.0E-67 T 31-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DY252_10720 2dca5330feae4a7262513eb890725ae1 473 PRINTS PR01050 Pyruvate kinase family signature 214 240 2.0E-67 T 31-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DY252_10720 2dca5330feae4a7262513eb890725ae1 473 PRINTS PR01050 Pyruvate kinase family signature 241 265 2.0E-67 T 31-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DY252_10720 2dca5330feae4a7262513eb890725ae1 473 PRINTS PR01050 Pyruvate kinase family signature 310 326 2.0E-67 T 31-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DY252_10720 2dca5330feae4a7262513eb890725ae1 473 PRINTS PR01050 Pyruvate kinase family signature 266 290 2.0E-67 T 31-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DY252_10720 2dca5330feae4a7262513eb890725ae1 473 PRINTS PR01050 Pyruvate kinase family signature 62 78 2.0E-67 T 31-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DY252_10720 2dca5330feae4a7262513eb890725ae1 473 SUPERFAMILY SSF51621 2 340 7.33E-98 T 31-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DY252_10720 2dca5330feae4a7262513eb890725ae1 473 SUPERFAMILY SSF52935 320 471 2.22E-39 T 31-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DY252_10720 2dca5330feae4a7262513eb890725ae1 473 Gene3D G3DSA:3.20.20.60 5 332 3.4E-172 T 31-10-2018 DY252_10720 2dca5330feae4a7262513eb890725ae1 473 Gene3D G3DSA:3.40.1380.20 333 466 3.4E-172 T 31-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DY252_02385 d187a3aff73b448f22005bd7d7e51ce0 787 Gene3D G3DSA:1.10.3500.10 111 500 2.8E-152 T 31-10-2018 IPR023323 Tex-like domain superfamily DY252_02385 d187a3aff73b448f22005bd7d7e51ce0 787 SUPERFAMILY SSF47781 472 559 1.67E-27 T 31-10-2018 IPR010994 RuvA domain 2-like DY252_02385 d187a3aff73b448f22005bd7d7e51ce0 787 Pfam PF16921 Tex protein YqgF-like domain 327 453 2.0E-49 T 31-10-2018 IPR032639 Tex protein, YqgF-like domain DY252_02385 d187a3aff73b448f22005bd7d7e51ce0 787 Gene3D G3DSA:2.40.50.140 633 725 2.0E-29 T 31-10-2018 DY252_02385 d187a3aff73b448f22005bd7d7e51ce0 787 SUPERFAMILY SSF50249 640 726 1.12E-24 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_02385 d187a3aff73b448f22005bd7d7e51ce0 787 Pfam PF09371 Tex-like protein N-terminal domain 8 191 1.8E-70 T 31-10-2018 IPR018974 Tex-like protein, N-terminal DY252_02385 d187a3aff73b448f22005bd7d7e51ce0 787 SMART SM00316 651 722 4.6E-23 T 31-10-2018 IPR022967 RNA-binding domain, S1 DY252_02385 d187a3aff73b448f22005bd7d7e51ce0 787 SMART SM00732 327 426 1.7E-33 T 31-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 DY252_02385 d187a3aff73b448f22005bd7d7e51ce0 787 Gene3D G3DSA:3.30.420.140 326 453 2.8E-152 T 31-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 DY252_02385 d187a3aff73b448f22005bd7d7e51ce0 787 SUPERFAMILY SSF53098 323 471 3.19E-49 T 31-10-2018 IPR012337 Ribonuclease H-like superfamily DY252_02385 d187a3aff73b448f22005bd7d7e51ce0 787 Gene3D G3DSA:1.10.10.650 1 108 1.6E-40 T 31-10-2018 IPR023319 Tex-like protein, HTH domain superfamily DY252_02385 d187a3aff73b448f22005bd7d7e51ce0 787 Pfam PF12836 Helix-hairpin-helix motif 493 557 1.7E-27 T 31-10-2018 DY252_02385 d187a3aff73b448f22005bd7d7e51ce0 787 Pfam PF00575 S1 RNA binding domain 651 722 5.4E-20 T 31-10-2018 IPR003029 S1 domain GO:0003676 DY252_02385 d187a3aff73b448f22005bd7d7e51ce0 787 SUPERFAMILY SSF47781 562 634 5.11E-19 T 31-10-2018 IPR010994 RuvA domain 2-like DY252_02385 d187a3aff73b448f22005bd7d7e51ce0 787 SUPERFAMILY SSF158832 2 322 1.01E-117 T 31-10-2018 DY252_02385 d187a3aff73b448f22005bd7d7e51ce0 787 Gene3D G3DSA:1.10.150.310 501 632 3.0E-49 T 31-10-2018 DY252_05840 4ba97ead1f936deb28e9c562f50b34b1 353 Gene3D G3DSA:2.40.50.940 222 346 4.8E-29 T 31-10-2018 DY252_05840 4ba97ead1f936deb28e9c562f50b34b1 353 Pfam PF03459 TOBE domain 295 344 2.7E-6 T 31-10-2018 IPR005116 Transport-associated OB, type 1 DY252_05840 4ba97ead1f936deb28e9c562f50b34b1 353 SUPERFAMILY SSF50331 236 353 3.4E-26 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_05840 4ba97ead1f936deb28e9c562f50b34b1 353 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_05840 4ba97ead1f936deb28e9c562f50b34b1 353 SMART SM00382 28 211 2.3E-15 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_05840 4ba97ead1f936deb28e9c562f50b34b1 353 Gene3D G3DSA:2.40.50.140 285 337 4.8E-29 T 31-10-2018 DY252_05840 4ba97ead1f936deb28e9c562f50b34b1 353 SUPERFAMILY SSF52540 4 242 3.6E-88 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_05840 4ba97ead1f936deb28e9c562f50b34b1 353 Gene3D G3DSA:3.40.50.300 3 221 7.9E-67 T 31-10-2018 DY252_05840 4ba97ead1f936deb28e9c562f50b34b1 353 Pfam PF00005 ABC transporter 20 161 4.7E-31 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_05205 a9ee1042f629fe264efb6bfe325b689f 1035 SUPERFAMILY SSF52540 333 512 2.98E-8 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_05205 a9ee1042f629fe264efb6bfe325b689f 1035 SUPERFAMILY SSF48452 809 954 1.17E-7 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_05205 a9ee1042f629fe264efb6bfe325b689f 1035 SUPERFAMILY SSF52467 17 248 5.23E-9 T 31-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DY252_05205 a9ee1042f629fe264efb6bfe325b689f 1035 Pfam PF13289 SIR2-like domain 110 257 1.3E-23 T 31-10-2018 IPR039444 SIR2-like domain DY252_05965 68768f29bd5309fc4ea35ba26c2089c6 308 SUPERFAMILY SSF143631 33 304 4.97E-64 T 31-10-2018 IPR003374 ApbE-like superfamily DY252_05965 68768f29bd5309fc4ea35ba26c2089c6 308 Gene3D G3DSA:3.10.520.20 28 308 6.3E-62 T 31-10-2018 DY252_05965 68768f29bd5309fc4ea35ba26c2089c6 308 PIRSF PIRSF006268 3 308 2.9E-49 T 31-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 DY252_05965 68768f29bd5309fc4ea35ba26c2089c6 308 Pfam PF02424 ApbE family 40 301 1.4E-53 T 31-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 DY252_12300 f885190bcde0caa0ba611900df7340f3 165 SUPERFAMILY SSF54427 31 133 7.42E-32 T 31-10-2018 IPR032710 NTF2-like domain superfamily DY252_12300 f885190bcde0caa0ba611900df7340f3 165 SUPERFAMILY SSF103642 145 165 8.83E-8 T 31-10-2018 DY252_12300 f885190bcde0caa0ba611900df7340f3 165 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 6 132 25.684 T 31-10-2018 IPR023006 Uncharacterised protein family UPF0225 DY252_12300 f885190bcde0caa0ba611900df7340f3 165 Gene3D G3DSA:3.10.450.50 2 165 1.3E-53 T 31-10-2018 DY252_12300 f885190bcde0caa0ba611900df7340f3 165 Pfam PF02810 SEC-C motif 9 24 3.0E-4 T 31-10-2018 IPR004027 SEC-C motif DY252_12300 f885190bcde0caa0ba611900df7340f3 165 Pfam PF02810 SEC-C motif 148 165 1.9E-10 T 31-10-2018 IPR004027 SEC-C motif DY252_11505 1c10fd7d4a6c26f8bd49da53e5c45f04 200 Gene3D G3DSA:3.40.50.1240 1 190 1.4E-32 T 31-10-2018 IPR029033 Histidine phosphatase superfamily DY252_11505 1c10fd7d4a6c26f8bd49da53e5c45f04 200 SMART SM00855 5 151 3.8E-13 T 31-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DY252_11505 1c10fd7d4a6c26f8bd49da53e5c45f04 200 PIRSF PIRSF000709 2 165 1.3E-6 T 31-10-2018 DY252_11505 1c10fd7d4a6c26f8bd49da53e5c45f04 200 SUPERFAMILY SSF53254 5 180 2.75E-32 T 31-10-2018 IPR029033 Histidine phosphatase superfamily DY252_11505 1c10fd7d4a6c26f8bd49da53e5c45f04 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 190 9.2E-31 T 31-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DY252_21885 384fc69bf3bf32530d1ee29952af868c 238 SUPERFAMILY SSF52172 3 183 9.39E-40 T 31-10-2018 IPR011006 CheY-like superfamily DY252_21885 384fc69bf3bf32530d1ee29952af868c 238 Gene3D G3DSA:1.10.10.10 129 232 1.4E-29 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_21885 384fc69bf3bf32530d1ee29952af868c 238 Gene3D G3DSA:3.40.50.2300 2 124 4.6E-38 T 31-10-2018 DY252_21885 384fc69bf3bf32530d1ee29952af868c 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 229 7.9E-23 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_21885 384fc69bf3bf32530d1ee29952af868c 238 Pfam PF00072 Response regulator receiver domain 4 113 3.3E-30 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_21885 384fc69bf3bf32530d1ee29952af868c 238 SMART SM00448 2 112 2.7E-41 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_21885 384fc69bf3bf32530d1ee29952af868c 238 SMART SM00862 154 230 4.1E-21 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_04875 5efde688e94de5fc8905715224ee3f83 313 Gene3D G3DSA:3.30.1330.60 94 263 1.6E-47 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_04875 5efde688e94de5fc8905715224ee3f83 313 Pfam PF00691 OmpA family 148 247 2.4E-20 T 31-10-2018 IPR006665 OmpA-like domain DY252_04875 5efde688e94de5fc8905715224ee3f83 313 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 5 52 1.8E-14 T 31-10-2018 IPR025713 Motility protein B, N-terminal domain DY252_04875 5efde688e94de5fc8905715224ee3f83 313 SUPERFAMILY SSF103088 136 253 5.23E-32 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_19630 0893200971b01987e3d2ed02897d9d0c 240 Hamap MF_01393 ATP synthase subunit a [atpB]. 6 240 16.147 T 31-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_19630 0893200971b01987e3d2ed02897d9d0c 240 Pfam PF00119 ATP synthase A chain 30 233 1.0E-57 T 31-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_19630 0893200971b01987e3d2ed02897d9d0c 240 ProSitePatterns PS00449 ATP synthase a subunit signature. 170 179 - T 31-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_19630 0893200971b01987e3d2ed02897d9d0c 240 PRINTS PR00123 ATP synthase A subunit signature 167 189 3.1E-27 T 31-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_19630 0893200971b01987e3d2ed02897d9d0c 240 PRINTS PR00123 ATP synthase A subunit signature 220 235 3.1E-27 T 31-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_19630 0893200971b01987e3d2ed02897d9d0c 240 PRINTS PR00123 ATP synthase A subunit signature 147 162 3.1E-27 T 31-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_19630 0893200971b01987e3d2ed02897d9d0c 240 PRINTS PR00123 ATP synthase A subunit signature 86 102 3.1E-27 T 31-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_19630 0893200971b01987e3d2ed02897d9d0c 240 SUPERFAMILY SSF81336 78 233 7.85E-44 T 31-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_19630 0893200971b01987e3d2ed02897d9d0c 240 Gene3D G3DSA:1.20.120.220 78 240 1.5E-31 T 31-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_19630 0893200971b01987e3d2ed02897d9d0c 240 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 4 237 8.1E-65 T 31-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_15075 aff36c6a4cd427f0535a7a0b8590605c 157 SUPERFAMILY SSF46785 8 66 2.73E-19 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_15075 aff36c6a4cd427f0535a7a0b8590605c 157 SUPERFAMILY SSF54909 70 152 1.21E-21 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_15075 aff36c6a4cd427f0535a7a0b8590605c 157 SMART SM00344 8 117 8.2E-52 T 31-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DY252_15075 aff36c6a4cd427f0535a7a0b8590605c 157 Pfam PF01037 Lrp/AsnC ligand binding domain 74 147 7.5E-24 T 31-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DY252_15075 aff36c6a4cd427f0535a7a0b8590605c 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 55 3.8E-20 T 31-10-2018 DY252_15075 aff36c6a4cd427f0535a7a0b8590605c 157 Gene3D G3DSA:1.10.10.10 1 59 1.9E-27 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_15075 aff36c6a4cd427f0535a7a0b8590605c 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 26 52 - T 31-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DY252_15075 aff36c6a4cd427f0535a7a0b8590605c 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 2.7E-19 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_15075 aff36c6a4cd427f0535a7a0b8590605c 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 2.7E-19 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_15075 aff36c6a4cd427f0535a7a0b8590605c 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 2.7E-19 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_15075 aff36c6a4cd427f0535a7a0b8590605c 157 Gene3D G3DSA:3.30.70.920 60 153 2.0E-26 T 31-10-2018 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 SUPERFAMILY SSF55424 348 471 1.55E-31 T 31-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 TIGRFAM TIGR02053 MerA: mercury(II) reductase 12 473 2.4E-168 T 31-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 1.4E-34 T 31-10-2018 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 1.4E-34 T 31-10-2018 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 1.4E-34 T 31-10-2018 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 1.4E-34 T 31-10-2018 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 1.4E-34 T 31-10-2018 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 Gene3D G3DSA:3.30.390.30 348 473 3.4E-41 T 31-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 457 1.2E-26 T 31-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 2.6E-66 T 31-10-2018 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 2.6E-66 T 31-10-2018 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 2.6E-66 T 31-10-2018 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 2.6E-66 T 31-10-2018 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 2.6E-66 T 31-10-2018 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 13 35 2.6E-66 T 31-10-2018 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 2.6E-66 T 31-10-2018 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 2.6E-66 T 31-10-2018 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 2.6E-66 T 31-10-2018 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 Gene3D G3DSA:3.50.50.60 15 327 5.4E-102 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_00465 6dd011d8153e7d53367561895d18a37f 473 Gene3D G3DSA:3.50.50.60 152 272 5.4E-102 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_00465 6dd011d8153e7d53367561895d18a37f 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 12 329 4.5E-65 T 31-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 31-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 PIRSF PIRSF000350 2 473 1.3E-169 T 31-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DY252_00465 6dd011d8153e7d53367561895d18a37f 473 SUPERFAMILY SSF51905 10 369 4.54E-55 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_20395 def478aab8a8caa9438433a23221b602 446 Gene3D G3DSA:1.20.1250.20 222 420 9.3E-11 T 31-10-2018 DY252_20395 def478aab8a8caa9438433a23221b602 446 SUPERFAMILY SSF103473 18 393 2.09E-32 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_20395 def478aab8a8caa9438433a23221b602 446 Gene3D G3DSA:1.20.1250.20 9 206 9.2E-14 T 31-10-2018 DY252_20395 def478aab8a8caa9438433a23221b602 446 Pfam PF13347 MFS/sugar transport protein 14 430 5.0E-72 T 31-10-2018 DY252_03790 418575bacb61bf164cf7aff97f9e0d0f 143 ProSitePatterns PS00893 Nudix box signature. 49 70 - T 31-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DY252_03790 418575bacb61bf164cf7aff97f9e0d0f 143 PRINTS PR00502 NUDIX hydrolase family signature 44 58 1.6E-9 T 31-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DY252_03790 418575bacb61bf164cf7aff97f9e0d0f 143 PRINTS PR00502 NUDIX hydrolase family signature 58 73 1.6E-9 T 31-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DY252_03790 418575bacb61bf164cf7aff97f9e0d0f 143 Gene3D G3DSA:3.90.79.10 10 143 2.0E-41 T 31-10-2018 DY252_03790 418575bacb61bf164cf7aff97f9e0d0f 143 Pfam PF14815 NUDIX domain 20 136 3.6E-20 T 31-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DY252_03790 418575bacb61bf164cf7aff97f9e0d0f 143 SUPERFAMILY SSF55811 9 140 1.1E-39 T 31-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DY252_03790 418575bacb61bf164cf7aff97f9e0d0f 143 TIGRFAM TIGR00586 mutt: mutator mutT protein 20 140 1.2E-30 T 31-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 DY252_15065 6544de11a95520ce69c74dcbebae13a4 1267 PIRSF PIRSF000197 1 1265 0.0 T 31-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DY252_15065 6544de11a95520ce69c74dcbebae13a4 1267 SUPERFAMILY SSF51730 182 525 2.2E-116 T 31-10-2018 IPR029041 FAD-linked oxidoreductase-like DY252_15065 6544de11a95520ce69c74dcbebae13a4 1267 Pfam PF01619 Proline dehydrogenase 190 483 7.5E-96 T 31-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 DY252_15065 6544de11a95520ce69c74dcbebae13a4 1267 Gene3D G3DSA:3.40.605.10 542 1013 3.3E-145 T 31-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_15065 6544de11a95520ce69c74dcbebae13a4 1267 SUPERFAMILY SSF53720 540 1012 4.06E-130 T 31-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DY252_15065 6544de11a95520ce69c74dcbebae13a4 1267 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 816 827 - T 31-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DY252_15065 6544de11a95520ce69c74dcbebae13a4 1267 Pfam PF00171 Aldehyde dehydrogenase family 567 1011 5.1E-117 T 31-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DY252_15065 6544de11a95520ce69c74dcbebae13a4 1267 Gene3D G3DSA:3.20.20.220 146 518 1.1E-140 T 31-10-2018 DY252_15065 6544de11a95520ce69c74dcbebae13a4 1267 Gene3D G3DSA:3.40.309.10 791 983 3.3E-145 T 31-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DY252_15065 6544de11a95520ce69c74dcbebae13a4 1267 SUPERFAMILY SSF81935 9 181 1.44E-64 T 31-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DY252_15065 6544de11a95520ce69c74dcbebae13a4 1267 Gene3D G3DSA:3.20.20.220 10 102 1.7E-6 T 31-10-2018 DY252_15065 6544de11a95520ce69c74dcbebae13a4 1267 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 518 1012 1.1E-212 T 31-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DY252_15065 6544de11a95520ce69c74dcbebae13a4 1267 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 66 179 7.3E-46 T 31-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DY252_15065 6544de11a95520ce69c74dcbebae13a4 1267 SUPERFAMILY SSF53720 1043 1213 2.49E-7 T 31-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DY252_01060 7d8636e78a7f4a8c6bff02d2dd119e1d 139 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 11 118 1.1E-15 T 31-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DY252_01060 7d8636e78a7f4a8c6bff02d2dd119e1d 139 Gene3D G3DSA:3.30.300.20 6 110 6.9E-26 T 31-10-2018 IPR015946 K homology domain-like, alpha/beta DY252_01060 7d8636e78a7f4a8c6bff02d2dd119e1d 139 SUPERFAMILY SSF89919 8 119 2.22E-28 T 31-10-2018 IPR023799 Ribosome-binding factor A domain superfamily DY252_01060 7d8636e78a7f4a8c6bff02d2dd119e1d 139 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 11 117 22.442 T 31-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DY252_01060 7d8636e78a7f4a8c6bff02d2dd119e1d 139 Pfam PF02033 Ribosome-binding factor A 12 117 1.3E-25 T 31-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DY252_01060 7d8636e78a7f4a8c6bff02d2dd119e1d 139 ProSitePatterns PS01319 Ribosome-binding factor A signature. 83 104 - T 31-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 DY252_01060 7d8636e78a7f4a8c6bff02d2dd119e1d 139 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 15 104 4.0E-17 T 31-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DY252_04830 b07261acab4f247ca163e8ce887adbfb 318 SUPERFAMILY SSF82114 175 317 1.07E-41 T 31-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 DY252_04830 b07261acab4f247ca163e8ce887adbfb 318 Gene3D G3DSA:3.40.50.620 1 186 3.1E-60 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_04830 b07261acab4f247ca163e8ce887adbfb 318 SMART SM00904 184 316 8.8E-61 T 31-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 DY252_04830 b07261acab4f247ca163e8ce887adbfb 318 Pfam PF06574 FAD synthetase 13 166 1.2E-51 T 31-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DY252_04830 b07261acab4f247ca163e8ce887adbfb 318 SUPERFAMILY SSF52374 17 186 5.91E-35 T 31-10-2018 DY252_04830 b07261acab4f247ca163e8ce887adbfb 318 PIRSF PIRSF004491 1 318 1.4E-99 T 31-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DY252_04830 b07261acab4f247ca163e8ce887adbfb 318 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 315 3.8E-82 T 31-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DY252_04830 b07261acab4f247ca163e8ce887adbfb 318 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 43 4.2E-7 T 31-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DY252_04830 b07261acab4f247ca163e8ce887adbfb 318 Gene3D G3DSA:2.40.30.30 187 318 1.7E-39 T 31-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 DY252_04830 b07261acab4f247ca163e8ce887adbfb 318 Pfam PF01687 Riboflavin kinase 185 315 7.8E-36 T 31-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 DY252_07970 9c7187aee91d64aacedf63085fcd2bd0 303 Pfam PF00701 Dihydrodipicolinate synthetase family 12 296 3.3E-42 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_07970 9c7187aee91d64aacedf63085fcd2bd0 303 Gene3D G3DSA:3.20.20.70 2 300 1.0E-77 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_07970 9c7187aee91d64aacedf63085fcd2bd0 303 SMART SM01130 11 300 3.2E-53 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_07970 9c7187aee91d64aacedf63085fcd2bd0 303 SUPERFAMILY SSF51569 11 300 6.07E-61 T 31-10-2018 DY252_07970 9c7187aee91d64aacedf63085fcd2bd0 303 PIRSF PIRSF001365 8 302 1.1E-50 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_02165 9697fd90b980c88ae8647fc6abebd60b 438 Gene3D G3DSA:3.40.190.10 186 354 1.3E-27 T 31-10-2018 DY252_02165 9697fd90b980c88ae8647fc6abebd60b 438 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 18 38 0.0012 T 31-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DY252_02165 9697fd90b980c88ae8647fc6abebd60b 438 SUPERFAMILY SSF53850 53 436 1.3E-49 T 31-10-2018 DY252_02165 9697fd90b980c88ae8647fc6abebd60b 438 Pfam PF13416 Bacterial extracellular solute-binding protein 69 363 3.0E-18 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_02165 9697fd90b980c88ae8647fc6abebd60b 438 Gene3D G3DSA:3.40.190.10 157 181 2.5E-5 T 31-10-2018 DY252_02165 9697fd90b980c88ae8647fc6abebd60b 438 Gene3D G3DSA:3.40.190.10 74 156 2.5E-5 T 31-10-2018 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 SMART SM00831 21 94 5.5E-39 T 31-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 SUPERFAMILY SSF81653 133 240 2.88E-28 T 31-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 Gene3D G3DSA:3.40.1110.10 352 552 7.1E-290 T 31-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 Gene3D G3DSA:3.40.50.1000 339 691 7.1E-290 T 31-10-2018 IPR023214 HAD superfamily DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 Pfam PF00122 E1-E2 ATPase 134 321 4.1E-50 T 31-10-2018 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 SUPERFAMILY SSF81660 349 549 4.36E-54 T 31-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 Gene3D G3DSA:1.20.1110.10 72 901 7.1E-290 T 31-10-2018 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 SUPERFAMILY SSF81665 21 909 1.44E-121 T 31-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 Pfam PF00702 haloacid dehalogenase-like hydrolase 339 660 4.8E-24 T 31-10-2018 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 342 356 3.4E-39 T 31-10-2018 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 646 665 3.4E-39 T 31-10-2018 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 670 682 3.4E-39 T 31-10-2018 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 556 3.4E-39 T 31-10-2018 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 567 577 3.4E-39 T 31-10-2018 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 179 193 3.4E-39 T 31-10-2018 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 Gene3D G3DSA:2.70.150.10 38 244 7.1E-290 T 31-10-2018 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 646 662 1.1E-17 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 503 521 1.1E-17 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 678 703 1.1E-17 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 618 634 1.1E-17 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 SUPERFAMILY SSF56784 340 751 7.5E-62 T 31-10-2018 IPR036412 HAD-like superfamily DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 Pfam PF00690 Cation transporter/ATPase, N-terminus 22 88 1.4E-20 T 31-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 Pfam PF00689 Cation transporting ATPase, C-terminus 731 902 1.8E-40 T 31-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 100 212 2.0E-18 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 612 734 3.6E-34 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 226 363 1.6E-24 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_03825 b6ecd19024269f2e2d1bd3fdee255da6 913 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 344 350 - T 31-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DY252_04245 6c136f6d4d787b896dbe37d58fc0f7c4 315 Gene3D G3DSA:3.40.1010.20 12 285 1.0E-109 T 31-10-2018 DY252_04245 6c136f6d4d787b896dbe37d58fc0f7c4 315 Gene3D G3DSA:3.40.50.11270 18 102 1.0E-109 T 31-10-2018 DY252_04245 6c136f6d4d787b896dbe37d58fc0f7c4 315 Pfam PF02401 LytB protein 9 286 1.7E-90 T 31-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DY252_04245 6c136f6d4d787b896dbe37d58fc0f7c4 315 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 8 289 6.0E-101 T 31-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DY252_04245 6c136f6d4d787b896dbe37d58fc0f7c4 315 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 7 291 37.129 T 31-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DY252_04245 6c136f6d4d787b896dbe37d58fc0f7c4 315 Gene3D G3DSA:3.40.1010.20 103 200 1.0E-109 T 31-10-2018 DY252_19930 2e8d4f071265f87fb7f20b42e0bfeeac 232 SUPERFAMILY SSF46785 150 229 2.64E-18 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_19930 2e8d4f071265f87fb7f20b42e0bfeeac 232 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 178 194 1.9E-11 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_19930 2e8d4f071265f87fb7f20b42e0bfeeac 232 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 194 209 1.9E-11 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_19930 2e8d4f071265f87fb7f20b42e0bfeeac 232 Gene3D G3DSA:1.10.10.10 150 231 1.4E-24 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_19930 2e8d4f071265f87fb7f20b42e0bfeeac 232 SUPERFAMILY SSF51206 11 148 7.07E-34 T 31-10-2018 IPR018490 Cyclic nucleotide-binding-like DY252_19930 2e8d4f071265f87fb7f20b42e0bfeeac 232 Pfam PF00027 Cyclic nucleotide-binding domain 38 120 2.2E-17 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_19930 2e8d4f071265f87fb7f20b42e0bfeeac 232 Gene3D G3DSA:2.60.120.10 33 149 1.9E-41 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_19930 2e8d4f071265f87fb7f20b42e0bfeeac 232 ProSitePatterns PS00042 Crp-type HTH domain signature. 180 203 - T 31-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 DY252_19930 2e8d4f071265f87fb7f20b42e0bfeeac 232 SMART SM00100 18 133 1.4E-18 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_19930 2e8d4f071265f87fb7f20b42e0bfeeac 232 Pfam PF13545 Crp-like helix-turn-helix domain 153 228 2.7E-18 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_19930 2e8d4f071265f87fb7f20b42e0bfeeac 232 SMART SM00419 172 221 4.1E-13 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_07100 07830901e962044d069d840728d0f259 436 Gene3D G3DSA:1.10.40.30 354 433 2.0E-27 T 31-10-2018 DY252_07100 07830901e962044d069d840728d0f259 436 ProSitePatterns PS00163 Fumarate lyases signature. 266 275 - T 31-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DY252_07100 07830901e962044d069d840728d0f259 436 SUPERFAMILY SSF48557 3 434 3.46E-130 T 31-10-2018 IPR008948 L-Aspartase-like GO:0003824 DY252_07100 07830901e962044d069d840728d0f259 436 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 434 5.1E-153 T 31-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DY252_07100 07830901e962044d069d840728d0f259 436 Pfam PF10397 Adenylosuccinate lyase C-terminus 355 433 6.4E-25 T 31-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DY252_07100 07830901e962044d069d840728d0f259 436 Pfam PF00206 Lyase 17 289 8.4E-54 T 31-10-2018 IPR022761 Fumarate lyase, N-terminal DY252_07100 07830901e962044d069d840728d0f259 436 Gene3D G3DSA:1.10.275.10 1 97 2.0E-28 T 31-10-2018 IPR024083 Fumarase/histidase, N-terminal DY252_07100 07830901e962044d069d840728d0f259 436 SMART SM00998 354 434 4.0E-35 T 31-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DY252_07100 07830901e962044d069d840728d0f259 436 PRINTS PR00149 Fumarate lyase superfamily signature 93 111 8.8E-25 T 31-10-2018 IPR000362 Fumarate lyase family DY252_07100 07830901e962044d069d840728d0f259 436 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 8.8E-25 T 31-10-2018 IPR000362 Fumarate lyase family DY252_07100 07830901e962044d069d840728d0f259 436 PRINTS PR00149 Fumarate lyase superfamily signature 266 282 8.8E-25 T 31-10-2018 IPR000362 Fumarate lyase family DY252_07100 07830901e962044d069d840728d0f259 436 PRINTS PR00149 Fumarate lyase superfamily signature 221 248 8.8E-25 T 31-10-2018 IPR000362 Fumarate lyase family DY252_07100 07830901e962044d069d840728d0f259 436 Gene3D G3DSA:1.20.200.10 98 352 9.5E-91 T 31-10-2018 DY252_01890 1a962f5acb5762a23d1bfcd9e410959e 297 Gene3D G3DSA:2.60.450.10 153 279 5.8E-10 T 31-10-2018 DY252_01890 1a962f5acb5762a23d1bfcd9e410959e 297 Gene3D G3DSA:2.60.450.10 49 152 7.0E-7 T 31-10-2018 DY252_01890 1a962f5acb5762a23d1bfcd9e410959e 297 Pfam PF03968 OstA-like protein 55 152 5.6E-7 T 31-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal DY252_01890 1a962f5acb5762a23d1bfcd9e410959e 297 Pfam PF03968 OstA-like protein 156 260 6.7E-7 T 31-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal DY252_21970 84670281304b9689f4031db40b58c6e0 315 Gene3D G3DSA:3.40.190.150 24 305 4.3E-74 T 31-10-2018 DY252_21970 84670281304b9689f4031db40b58c6e0 315 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 45 312 3.2E-46 T 31-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DY252_21970 84670281304b9689f4031db40b58c6e0 315 PIRSF PIRSF017082 1 315 1.2E-77 T 31-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DY252_21970 84670281304b9689f4031db40b58c6e0 315 Gene3D G3DSA:3.40.190.10 120 240 4.3E-74 T 31-10-2018 DY252_21970 84670281304b9689f4031db40b58c6e0 315 SUPERFAMILY SSF53850 108 278 9.77E-6 T 31-10-2018 DY252_12345 f7e307ab75b3e563dfe18f84a6951cd1 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 397 4.5E-156 T 31-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DY252_12345 f7e307ab75b3e563dfe18f84a6951cd1 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 405 53.112 T 31-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DY252_12345 f7e307ab75b3e563dfe18f84a6951cd1 407 Pfam PF01676 Metalloenzyme superfamily 3 395 3.9E-37 T 31-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 DY252_12345 f7e307ab75b3e563dfe18f84a6951cd1 407 Gene3D G3DSA:3.40.720.10 3 405 3.2E-152 T 31-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DY252_12345 f7e307ab75b3e563dfe18f84a6951cd1 407 Gene3D G3DSA:3.30.70.1250 116 237 3.2E-152 T 31-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DY252_12345 f7e307ab75b3e563dfe18f84a6951cd1 407 SUPERFAMILY SSF53649 2 405 3.4E-71 T 31-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DY252_12345 f7e307ab75b3e563dfe18f84a6951cd1 407 SUPERFAMILY SSF143856 118 234 1.03E-47 T 31-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DY252_12345 f7e307ab75b3e563dfe18f84a6951cd1 407 PIRSF PIRSF001491 1 407 3.3E-156 T 31-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DY252_01200 825e4e09539fda61c3fd779fc4d09daa 292 Gene3D G3DSA:1.10.10.10 1 87 7.9E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_01200 825e4e09539fda61c3fd779fc4d09daa 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 60 6.9E-19 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_01200 825e4e09539fda61c3fd779fc4d09daa 292 Gene3D G3DSA:3.40.190.10 158 252 1.7E-44 T 31-10-2018 DY252_01200 825e4e09539fda61c3fd779fc4d09daa 292 SUPERFAMILY SSF46785 4 108 3.2E-21 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_01200 825e4e09539fda61c3fd779fc4d09daa 292 Gene3D G3DSA:3.40.190.10 97 278 1.7E-44 T 31-10-2018 DY252_01200 825e4e09539fda61c3fd779fc4d09daa 292 Pfam PF03466 LysR substrate binding domain 87 282 1.5E-28 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_01200 825e4e09539fda61c3fd779fc4d09daa 292 SUPERFAMILY SSF53850 87 285 6.7E-32 T 31-10-2018 DY252_01200 825e4e09539fda61c3fd779fc4d09daa 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 48 2.9E-7 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_01200 825e4e09539fda61c3fd779fc4d09daa 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 16 27 2.9E-7 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_01200 825e4e09539fda61c3fd779fc4d09daa 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 37 2.9E-7 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_01990 f32686bc14e46c937caa6c793999e85c 266 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 265 33.56 T 31-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DY252_01990 f32686bc14e46c937caa6c793999e85c 266 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 5.9E-85 T 31-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DY252_01990 f32686bc14e46c937caa6c793999e85c 266 Gene3D G3DSA:3.40.50.720 4 264 4.5E-97 T 31-10-2018 DY252_01990 f32686bc14e46c937caa6c793999e85c 266 SUPERFAMILY SSF51735 1 266 8.6E-47 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_01990 f32686bc14e46c937caa6c793999e85c 266 SUPERFAMILY SSF55347 126 236 6.54E-35 T 31-10-2018 DY252_01990 f32686bc14e46c937caa6c793999e85c 266 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 127 264 1.9E-43 T 31-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DY252_01990 f32686bc14e46c937caa6c793999e85c 266 PIRSF PIRSF000161 1 266 4.9E-84 T 31-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DY252_01990 f32686bc14e46c937caa6c793999e85c 266 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 124 6.7E-35 T 31-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DY252_01990 f32686bc14e46c937caa6c793999e85c 266 Gene3D G3DSA:3.30.360.10 126 234 4.5E-97 T 31-10-2018 DY252_01990 f32686bc14e46c937caa6c793999e85c 266 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 31-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DY252_02885 36a4332865054b1acdb3be083bcdf9a9 235 Pfam PF01810 LysE type translocator 16 210 9.9E-24 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_02885 36a4332865054b1acdb3be083bcdf9a9 235 PIRSF PIRSF006324 1 214 1.8E-51 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_06180 076896b9dd748451c528f5e3db077e5b 195 SMART SM00448 6 117 0.0041 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_06180 076896b9dd748451c528f5e3db077e5b 195 SUPERFAMILY SSF52172 5 188 4.7E-47 T 31-10-2018 IPR011006 CheY-like superfamily DY252_06180 076896b9dd748451c528f5e3db077e5b 195 PIRSF PIRSF036382 1 194 7.3E-63 T 31-10-2018 IPR008327 Signal transduction response regulator, antiterminator DY252_06180 076896b9dd748451c528f5e3db077e5b 195 SMART SM01012 133 188 2.7E-21 T 31-10-2018 IPR005561 ANTAR domain GO:0003723 DY252_06180 076896b9dd748451c528f5e3db077e5b 195 Pfam PF00072 Response regulator receiver domain 8 114 1.2E-10 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_06180 076896b9dd748451c528f5e3db077e5b 195 Gene3D G3DSA:3.40.50.2300 2 133 1.2E-13 T 31-10-2018 DY252_06180 076896b9dd748451c528f5e3db077e5b 195 Gene3D G3DSA:1.10.10.10 136 194 5.8E-19 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_06180 076896b9dd748451c528f5e3db077e5b 195 Pfam PF03861 ANTAR domain 136 188 8.9E-19 T 31-10-2018 IPR005561 ANTAR domain GO:0003723 DY252_02375 6a1a0470f6956397f9412b306ed101bc 215 Pfam PF02581 Thiamine monophosphate synthase 8 189 2.9E-57 T 31-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_02375 6a1a0470f6956397f9412b306ed101bc 215 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 5 207 25.382 T 31-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_02375 6a1a0470f6956397f9412b306ed101bc 215 SUPERFAMILY SSF51391 4 207 2.22E-57 T 31-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_02375 6a1a0470f6956397f9412b306ed101bc 215 Gene3D G3DSA:3.20.20.70 1 207 1.1E-64 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_02375 6a1a0470f6956397f9412b306ed101bc 215 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 7 200 4.4E-59 T 31-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_04295 efebcbdf54ead044830f4e28445b5773 192 Pfam PF02622 Uncharacterized ACR, COG1678 20 179 2.2E-46 T 31-10-2018 IPR003774 Protein of unknown function UPF0301 DY252_04295 efebcbdf54ead044830f4e28445b5773 192 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 9 192 35.883 T 31-10-2018 IPR003774 Protein of unknown function UPF0301 DY252_04295 efebcbdf54ead044830f4e28445b5773 192 Gene3D G3DSA:3.40.1740.10 7 192 1.3E-64 T 31-10-2018 DY252_04295 efebcbdf54ead044830f4e28445b5773 192 SUPERFAMILY SSF143456 10 192 1.11E-60 T 31-10-2018 DY252_09190 7a0fe5f594779a2be2bed214e2efe3eb 510 Pfam PF01039 Carboxyl transferase domain 27 508 1.2E-194 T 31-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 DY252_09190 7a0fe5f594779a2be2bed214e2efe3eb 510 Gene3D G3DSA:3.90.226.10 258 510 1.2E-95 T 31-10-2018 DY252_09190 7a0fe5f594779a2be2bed214e2efe3eb 510 SUPERFAMILY SSF52096 3 248 2.09E-79 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_09190 7a0fe5f594779a2be2bed214e2efe3eb 510 Gene3D G3DSA:3.90.226.10 1 256 1.5E-94 T 31-10-2018 DY252_09190 7a0fe5f594779a2be2bed214e2efe3eb 510 SUPERFAMILY SSF52096 251 510 4.04E-92 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_20580 9ecc6ab74844d33072ecfdd48156e00b 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 269 1.1E-17 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_20580 9ecc6ab74844d33072ecfdd48156e00b 270 Gene3D G3DSA:1.10.3720.10 71 269 6.8E-32 T 31-10-2018 IPR035906 MetI-like superfamily DY252_20580 9ecc6ab74844d33072ecfdd48156e00b 270 SUPERFAMILY SSF161098 74 264 1.22E-33 T 31-10-2018 IPR035906 MetI-like superfamily DY252_20580 9ecc6ab74844d33072ecfdd48156e00b 270 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 24 269 1.8E-90 T 31-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 DY252_21640 91199ac59d9a981369374427bb5dbdc0 330 SUPERFAMILY SSF81324 20 245 9.99E-46 T 31-10-2018 DY252_21640 91199ac59d9a981369374427bb5dbdc0 330 PRINTS PR00169 Potassium channel signature 185 207 2.0E-29 T 31-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DY252_21640 91199ac59d9a981369374427bb5dbdc0 330 PRINTS PR00169 Potassium channel signature 17 45 2.0E-29 T 31-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DY252_21640 91199ac59d9a981369374427bb5dbdc0 330 PRINTS PR00169 Potassium channel signature 59 82 2.0E-29 T 31-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DY252_21640 91199ac59d9a981369374427bb5dbdc0 330 PRINTS PR00169 Potassium channel signature 125 151 2.0E-29 T 31-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DY252_21640 91199ac59d9a981369374427bb5dbdc0 330 PRINTS PR00169 Potassium channel signature 214 240 2.0E-29 T 31-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DY252_21640 91199ac59d9a981369374427bb5dbdc0 330 PRINTS PR00169 Potassium channel signature 154 177 2.0E-29 T 31-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DY252_21640 91199ac59d9a981369374427bb5dbdc0 330 PRINTS PR01459 KCNQ voltage-gated potassium channel family signature 67 86 4.6E-5 T 31-10-2018 IPR003937 Potassium channel, voltage dependent, KCNQ GO:0005249|GO:0006813|GO:0016020 Reactome: R-HSA-1296072 DY252_21640 91199ac59d9a981369374427bb5dbdc0 330 PRINTS PR01459 KCNQ voltage-gated potassium channel family signature 87 106 4.6E-5 T 31-10-2018 IPR003937 Potassium channel, voltage dependent, KCNQ GO:0005249|GO:0006813|GO:0016020 Reactome: R-HSA-1296072 DY252_21640 91199ac59d9a981369374427bb5dbdc0 330 Gene3D G3DSA:1.10.287.70 23 244 2.0E-55 T 31-10-2018 DY252_21640 91199ac59d9a981369374427bb5dbdc0 330 Pfam PF00520 Ion transport protein 28 243 6.3E-25 T 31-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 DY252_11510 7840195aba9aacbf78ce1142859952e3 380 Gene3D G3DSA:3.40.50.2000 201 360 5.6E-20 T 31-10-2018 DY252_11510 7840195aba9aacbf78ce1142859952e3 380 SUPERFAMILY SSF53756 8 372 1.77E-19 T 31-10-2018 DY252_11510 7840195aba9aacbf78ce1142859952e3 380 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 218 356 4.7E-13 T 31-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 DY252_06680 2e663f6c94f3cd9dca9003347d94e66c 378 Pfam PF13484 4Fe-4S double cluster binding domain 195 259 6.1E-19 T 31-10-2018 DY252_06680 2e663f6c94f3cd9dca9003347d94e66c 378 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 196 207 - T 31-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DY252_06680 2e663f6c94f3cd9dca9003347d94e66c 378 SUPERFAMILY SSF54862 172 289 1.09E-18 T 31-10-2018 DY252_06680 2e663f6c94f3cd9dca9003347d94e66c 378 Pfam PF08331 Domain of unknown function (DUF1730) 65 143 2.2E-22 T 31-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 DY252_06680 2e663f6c94f3cd9dca9003347d94e66c 378 SUPERFAMILY SSF48371 309 363 4.26E-5 T 31-10-2018 IPR016024 Armadillo-type fold DY252_06680 2e663f6c94f3cd9dca9003347d94e66c 378 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 318 44.247 T 31-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 DY252_06680 2e663f6c94f3cd9dca9003347d94e66c 378 Pfam PF02985 HEAT repeat 325 353 3.1E-5 T 31-10-2018 IPR000357 HEAT repeat GO:0005515 DY252_06680 2e663f6c94f3cd9dca9003347d94e66c 378 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 15 350 5.8E-131 T 31-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 DY252_19520 7621dec368edc905fdef04654871a623 149 Gene3D G3DSA:3.10.580.10 3 143 1.8E-40 T 31-10-2018 DY252_19520 7621dec368edc905fdef04654871a623 149 Pfam PF00571 CBS domain 75 126 5.2E-12 T 31-10-2018 IPR000644 CBS domain DY252_19520 7621dec368edc905fdef04654871a623 149 Pfam PF00571 CBS domain 14 61 5.8E-9 T 31-10-2018 IPR000644 CBS domain DY252_19520 7621dec368edc905fdef04654871a623 149 SMART SM00116 14 62 1.9E-6 T 31-10-2018 IPR000644 CBS domain DY252_19520 7621dec368edc905fdef04654871a623 149 SMART SM00116 80 127 1.5E-7 T 31-10-2018 IPR000644 CBS domain DY252_19520 7621dec368edc905fdef04654871a623 149 SUPERFAMILY SSF54631 14 133 8.09E-33 T 31-10-2018 DY252_13075 c27952cae8129fe54a741fb715f659fa 131 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 130 1.6E-27 T 31-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DY252_13075 c27952cae8129fe54a741fb715f659fa 131 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 129 1.2E-23 T 31-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DY252_13075 c27952cae8129fe54a741fb715f659fa 131 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 130 22.121 T 31-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DY252_13075 c27952cae8129fe54a741fb715f659fa 131 Gene3D G3DSA:3.90.470.20 1 129 2.2E-29 T 31-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DY252_13075 c27952cae8129fe54a741fb715f659fa 131 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 113 1.3E-16 T 31-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DY252_13075 c27952cae8129fe54a741fb715f659fa 131 SUPERFAMILY SSF56214 1 126 9.16E-24 T 31-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DY252_13075 c27952cae8129fe54a741fb715f659fa 131 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 102 7.0E-26 T 31-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DY252_03705 6745df16ff7947aeed71fa5bff5c98e8 106 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 2 106 9.5E-32 T 31-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 DY252_03705 6745df16ff7947aeed71fa5bff5c98e8 106 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 106 24.464 T 31-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 DY252_03705 6745df16ff7947aeed71fa5bff5c98e8 106 SUPERFAMILY SSF103481 8 104 5.49E-6 T 31-10-2018 DY252_11645 509fa182b7705b034f5fcc2f4d4321f1 319 SUPERFAMILY SSF53671 9 311 6.94E-96 T 31-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DY252_11645 509fa182b7705b034f5fcc2f4d4321f1 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 261 270 1.1E-15 T 31-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DY252_11645 509fa182b7705b034f5fcc2f4d4321f1 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 273 296 1.1E-15 T 31-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DY252_11645 509fa182b7705b034f5fcc2f4d4321f1 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 141 152 1.1E-15 T 31-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DY252_11645 509fa182b7705b034f5fcc2f4d4321f1 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 57 76 1.1E-15 T 31-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DY252_11645 509fa182b7705b034f5fcc2f4d4321f1 319 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 10 311 38.94 T 31-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DY252_11645 509fa182b7705b034f5fcc2f4d4321f1 319 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 162 307 4.6E-22 T 31-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DY252_11645 509fa182b7705b034f5fcc2f4d4321f1 319 PRINTS PR00101 Aspartate carbamoyltransferase signature 85 94 1.2E-28 T 31-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DY252_11645 509fa182b7705b034f5fcc2f4d4321f1 319 PRINTS PR00101 Aspartate carbamoyltransferase signature 224 233 1.2E-28 T 31-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DY252_11645 509fa182b7705b034f5fcc2f4d4321f1 319 PRINTS PR00101 Aspartate carbamoyltransferase signature 47 69 1.2E-28 T 31-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DY252_11645 509fa182b7705b034f5fcc2f4d4321f1 319 PRINTS PR00101 Aspartate carbamoyltransferase signature 140 157 1.2E-28 T 31-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DY252_11645 509fa182b7705b034f5fcc2f4d4321f1 319 PRINTS PR00101 Aspartate carbamoyltransferase signature 265 270 1.2E-28 T 31-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DY252_11645 509fa182b7705b034f5fcc2f4d4321f1 319 PRINTS PR00101 Aspartate carbamoyltransferase signature 290 304 1.2E-28 T 31-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DY252_11645 509fa182b7705b034f5fcc2f4d4321f1 319 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 12 153 4.8E-41 T 31-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DY252_11645 509fa182b7705b034f5fcc2f4d4321f1 319 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 12 309 7.0E-94 T 31-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DY252_11645 509fa182b7705b034f5fcc2f4d4321f1 319 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 57 64 - T 31-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DY252_11645 509fa182b7705b034f5fcc2f4d4321f1 319 Gene3D G3DSA:3.40.50.1370 141 288 2.7E-92 T 31-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DY252_11645 509fa182b7705b034f5fcc2f4d4321f1 319 Gene3D G3DSA:3.40.50.1370 16 303 2.7E-92 T 31-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DY252_18960 6d09e041224526cdbd2bcff8d10461eb 223 SUPERFAMILY SSF47616 87 222 7.82E-24 T 31-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DY252_18960 6d09e041224526cdbd2bcff8d10461eb 223 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 10 222 1.0E-72 T 31-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 DY252_18960 6d09e041224526cdbd2bcff8d10461eb 223 Gene3D G3DSA:3.40.30.10 10 83 4.0E-22 T 31-10-2018 DY252_18960 6d09e041224526cdbd2bcff8d10461eb 223 Gene3D G3DSA:1.20.1050.10 90 222 3.7E-38 T 31-10-2018 DY252_18960 6d09e041224526cdbd2bcff8d10461eb 223 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 83 3.1E-14 T 31-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DY252_18960 6d09e041224526cdbd2bcff8d10461eb 223 SUPERFAMILY SSF52833 5 90 1.08E-22 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_10320 113fd9735e2c42375fca8693df179ef6 76 Gene3D G3DSA:2.10.260.10 1 76 2.1E-33 T 31-10-2018 DY252_12305 7f7dd2ddcbbcc8f23b8c789f15799d87 289 Gene3D G3DSA:1.10.601.10 12 119 1.2E-33 T 31-10-2018 DY252_12305 7f7dd2ddcbbcc8f23b8c789f15799d87 289 Pfam PF04545 Sigma-70, region 4 229 279 1.5E-18 T 31-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DY252_12305 7f7dd2ddcbbcc8f23b8c789f15799d87 289 PIRSF PIRSF000770 24 288 3.1E-34 T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_12305 7f7dd2ddcbbcc8f23b8c789f15799d87 289 Pfam PF04542 Sigma-70 region 2 52 119 2.6E-17 T 31-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DY252_12305 7f7dd2ddcbbcc8f23b8c789f15799d87 289 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 282 1.3E-103 T 31-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 DY252_12305 7f7dd2ddcbbcc8f23b8c789f15799d87 289 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 47 280 1.1E-32 T 31-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DY252_12305 7f7dd2ddcbbcc8f23b8c789f15799d87 289 Pfam PF00140 Sigma-70 factor, region 1.2 18 45 4.1E-7 T 31-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DY252_12305 7f7dd2ddcbbcc8f23b8c789f15799d87 289 Gene3D G3DSA:1.20.140.160 131 283 2.1E-19 T 31-10-2018 DY252_12305 7f7dd2ddcbbcc8f23b8c789f15799d87 289 SUPERFAMILY SSF88659 189 282 3.74E-20 T 31-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DY252_12305 7f7dd2ddcbbcc8f23b8c789f15799d87 289 PRINTS PR00046 Major sigma-70 factor signature 252 267 2.9E-25 T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_12305 7f7dd2ddcbbcc8f23b8c789f15799d87 289 PRINTS PR00046 Major sigma-70 factor signature 76 89 2.9E-25 T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_12305 7f7dd2ddcbbcc8f23b8c789f15799d87 289 PRINTS PR00046 Major sigma-70 factor signature 100 108 2.9E-25 T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_12305 7f7dd2ddcbbcc8f23b8c789f15799d87 289 PRINTS PR00046 Major sigma-70 factor signature 233 245 2.9E-25 T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_12305 7f7dd2ddcbbcc8f23b8c789f15799d87 289 PRINTS PR00046 Major sigma-70 factor signature 267 278 2.9E-25 T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_12305 7f7dd2ddcbbcc8f23b8c789f15799d87 289 SUPERFAMILY SSF88946 12 120 1.73E-40 T 31-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DY252_11395 f1a8a2736dc2056ac62678c8769f870e 388 Pfam PF13393 Histidyl-tRNA synthetase 13 315 3.5E-83 T 31-10-2018 DY252_11395 f1a8a2736dc2056ac62678c8769f870e 388 SUPERFAMILY SSF55681 10 322 3.79E-44 T 31-10-2018 DY252_11395 f1a8a2736dc2056ac62678c8769f870e 388 Gene3D G3DSA:3.30.930.10 5 325 8.4E-57 T 31-10-2018 DY252_11395 f1a8a2736dc2056ac62678c8769f870e 388 PIRSF PIRSF001549 5 382 9.1E-39 T 31-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 DY252_11395 f1a8a2736dc2056ac62678c8769f870e 388 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 20 363 24.811 T 31-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 DY252_08680 b8f538a6131d2c561e3550ccc2e99a33 240 SUPERFAMILY SSF51735 15 240 1.66E-47 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_08680 b8f538a6131d2c561e3550ccc2e99a33 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 9.1E-9 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08680 b8f538a6131d2c561e3550ccc2e99a33 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 9.1E-9 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08680 b8f538a6131d2c561e3550ccc2e99a33 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 9.1E-9 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08680 b8f538a6131d2c561e3550ccc2e99a33 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 52 213 1.4E-13 T 31-10-2018 DY252_08680 b8f538a6131d2c561e3550ccc2e99a33 240 Gene3D G3DSA:3.40.50.720 8 240 4.4E-41 T 31-10-2018 DY252_19970 657504f025d7fd0ddbd1b6d580a2ac7d 468 SUPERFAMILY SSF53732 3 467 4.71E-168 T 31-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 DY252_19970 657504f025d7fd0ddbd1b6d580a2ac7d 468 ProSitePatterns PS00450 Aconitase family signature 1. 341 357 - T 31-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DY252_19970 657504f025d7fd0ddbd1b6d580a2ac7d 468 Gene3D G3DSA:3.30.499.10 330 468 7.1E-53 T 31-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 DY252_19970 657504f025d7fd0ddbd1b6d580a2ac7d 468 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 467 1.1E-241 T 31-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 DY252_19970 657504f025d7fd0ddbd1b6d580a2ac7d 468 PRINTS PR00415 Aconitase family signature 110 118 3.3E-49 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_19970 657504f025d7fd0ddbd1b6d580a2ac7d 468 PRINTS PR00415 Aconitase family signature 135 150 3.3E-49 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_19970 657504f025d7fd0ddbd1b6d580a2ac7d 468 PRINTS PR00415 Aconitase family signature 197 210 3.3E-49 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_19970 657504f025d7fd0ddbd1b6d580a2ac7d 468 PRINTS PR00415 Aconitase family signature 401 414 3.3E-49 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_19970 657504f025d7fd0ddbd1b6d580a2ac7d 468 PRINTS PR00415 Aconitase family signature 121 134 3.3E-49 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_19970 657504f025d7fd0ddbd1b6d580a2ac7d 468 PRINTS PR00415 Aconitase family signature 211 224 3.3E-49 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_19970 657504f025d7fd0ddbd1b6d580a2ac7d 468 PRINTS PR00415 Aconitase family signature 345 356 3.3E-49 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_19970 657504f025d7fd0ddbd1b6d580a2ac7d 468 PRINTS PR00415 Aconitase family signature 84 97 3.3E-49 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_19970 657504f025d7fd0ddbd1b6d580a2ac7d 468 PRINTS PR00415 Aconitase family signature 288 302 3.3E-49 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_19970 657504f025d7fd0ddbd1b6d580a2ac7d 468 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 3 468 60.859 T 31-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 DY252_19970 657504f025d7fd0ddbd1b6d580a2ac7d 468 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 31-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DY252_19970 657504f025d7fd0ddbd1b6d580a2ac7d 468 Gene3D G3DSA:3.30.499.20 6 288 1.5E-102 T 31-10-2018 DY252_19970 657504f025d7fd0ddbd1b6d580a2ac7d 468 Pfam PF00330 Aconitase family (aconitate hydratase) 9 459 2.2E-162 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_03920 9531aafc1e9507f730fc673d3aa0a17d 494 Pfam PF01565 FAD binding domain 52 190 1.8E-38 T 31-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DY252_03920 9531aafc1e9507f730fc673d3aa0a17d 494 Pfam PF02913 FAD linked oxidases, C-terminal domain 225 466 2.5E-58 T 31-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DY252_03920 9531aafc1e9507f730fc673d3aa0a17d 494 SUPERFAMILY SSF55103 230 475 1.23E-64 T 31-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DY252_03920 9531aafc1e9507f730fc673d3aa0a17d 494 Gene3D G3DSA:1.10.45.10 427 467 4.7E-8 T 31-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DY252_03920 9531aafc1e9507f730fc673d3aa0a17d 494 SUPERFAMILY SSF56176 13 226 2.43E-67 T 31-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DY252_03920 9531aafc1e9507f730fc673d3aa0a17d 494 Gene3D G3DSA:3.30.70.2740 346 426 5.9E-7 T 31-10-2018 DY252_03920 9531aafc1e9507f730fc673d3aa0a17d 494 Gene3D G3DSA:3.30.465.40 28 235 8.4E-65 T 31-10-2018 DY252_01080 656035dcc764cf46e6bade2e73dd79b2 179 Pfam PF17384 RimP C-terminal SH3 domain 97 161 2.1E-13 T 31-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal DY252_01080 656035dcc764cf46e6bade2e73dd79b2 179 Gene3D G3DSA:3.30.300.70 10 91 1.9E-19 T 31-10-2018 IPR035956 RimP, N-terminal domain superfamily DY252_01080 656035dcc764cf46e6bade2e73dd79b2 179 SUPERFAMILY SSF75420 12 94 4.18E-22 T 31-10-2018 IPR035956 RimP, N-terminal domain superfamily DY252_01080 656035dcc764cf46e6bade2e73dd79b2 179 SUPERFAMILY SSF74942 95 163 5.23E-16 T 31-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily DY252_01080 656035dcc764cf46e6bade2e73dd79b2 179 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 15 162 23.463 T 31-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 DY252_01080 656035dcc764cf46e6bade2e73dd79b2 179 Pfam PF02576 RimP N-terminal domain 20 94 1.4E-24 T 31-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal DY252_04600 b409e685137998f5f27d5e240da8b7a4 138 SUPERFAMILY SSF110916 9 97 1.83E-11 T 31-10-2018 DY252_04600 b409e685137998f5f27d5e240da8b7a4 138 Pfam PF00472 RF-1 domain 8 133 6.6E-23 T 31-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DY252_04600 b409e685137998f5f27d5e240da8b7a4 138 Gene3D G3DSA:3.30.160.20 1 137 1.4E-37 T 31-10-2018 DY252_04600 b409e685137998f5f27d5e240da8b7a4 138 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 31-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DY252_08085 7eb543e3c1c90d0564a2afb23627b5e9 794 SUPERFAMILY SSF103025 414 701 1.33E-78 T 31-10-2018 DY252_08085 7eb543e3c1c90d0564a2afb23627b5e9 794 Pfam PF09347 Domain of unknown function (DUF1989) 199 366 1.8E-42 T 31-10-2018 IPR018959 Protein of unknown function DUF1989 DY252_08085 7eb543e3c1c90d0564a2afb23627b5e9 794 Gene3D G3DSA:3.30.1360.120 406 784 2.9E-96 T 31-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DY252_08085 7eb543e3c1c90d0564a2afb23627b5e9 794 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 689 774 1.8E-21 T 31-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DY252_08085 7eb543e3c1c90d0564a2afb23627b5e9 794 SUPERFAMILY SSF101790 706 793 3.6E-20 T 31-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DY252_08085 7eb543e3c1c90d0564a2afb23627b5e9 794 Pfam PF01571 Aminomethyltransferase folate-binding domain 421 679 1.4E-68 T 31-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain DY252_06450 6a946d9d849cd1a5a40b344c53e37ed1 304 Gene3D G3DSA:3.40.50.20 1 86 7.7E-30 T 31-10-2018 DY252_06450 6a946d9d849cd1a5a40b344c53e37ed1 304 Pfam PF01820 D-ala D-ala ligase N-terminus 5 86 2.4E-19 T 31-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_06450 6a946d9d849cd1a5a40b344c53e37ed1 304 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 65 76 - T 31-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_06450 6a946d9d849cd1a5a40b344c53e37ed1 304 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 242 271 - T 31-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_06450 6a946d9d849cd1a5a40b344c53e37ed1 304 SUPERFAMILY SSF56059 98 299 1.85E-46 T 31-10-2018 DY252_06450 6a946d9d849cd1a5a40b344c53e37ed1 304 Pfam PF07478 D-ala D-ala ligase C-terminus 111 298 5.1E-43 T 31-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_06450 6a946d9d849cd1a5a40b344c53e37ed1 304 PIRSF PIRSF039102 1 55 4.2E-10 T 31-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_06450 6a946d9d849cd1a5a40b344c53e37ed1 304 PIRSF PIRSF039102 41 304 1.4E-72 T 31-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_06450 6a946d9d849cd1a5a40b344c53e37ed1 304 Gene3D G3DSA:3.30.470.20 88 296 3.2E-64 T 31-10-2018 DY252_06450 6a946d9d849cd1a5a40b344c53e37ed1 304 Gene3D G3DSA:3.30.1490.20 113 176 3.2E-64 T 31-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DY252_06450 6a946d9d849cd1a5a40b344c53e37ed1 304 SUPERFAMILY SSF52440 2 98 1.15E-30 T 31-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DY252_06450 6a946d9d849cd1a5a40b344c53e37ed1 304 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 300 6.5E-89 T 31-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_06450 6a946d9d849cd1a5a40b344c53e37ed1 304 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 301 33.433 T 31-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_08695 82a86b180545fe61c2bb04355f2ba895 421 SUPERFAMILY SSF53850 23 416 7.06E-76 T 31-10-2018 DY252_08695 82a86b180545fe61c2bb04355f2ba895 421 Gene3D G3DSA:3.40.190.10 136 407 5.0E-93 T 31-10-2018 DY252_08695 82a86b180545fe61c2bb04355f2ba895 421 Pfam PF01547 Bacterial extracellular solute-binding protein 41 331 7.7E-33 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_08695 82a86b180545fe61c2bb04355f2ba895 421 Gene3D G3DSA:3.40.190.10 49 368 5.0E-93 T 31-10-2018 DY252_07865 54156ef4b199d351b827177f962b51bf 229 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_07865 54156ef4b199d351b827177f962b51bf 229 SUPERFAMILY SSF52540 4 221 4.91E-54 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07865 54156ef4b199d351b827177f962b51bf 229 Gene3D G3DSA:3.40.50.300 2 229 5.4E-53 T 31-10-2018 DY252_07865 54156ef4b199d351b827177f962b51bf 229 SMART SM00382 29 209 1.3E-7 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_07865 54156ef4b199d351b827177f962b51bf 229 Pfam PF00005 ABC transporter 22 159 2.3E-28 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_03160 e2f29a4f183cfb5d48822b4643b14662 346 Pfam PF02625 XdhC and CoxI family 13 70 1.1E-15 T 31-10-2018 IPR003777 XdhC- CoxI DY252_03160 e2f29a4f183cfb5d48822b4643b14662 346 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 20 323 4.3E-82 T 31-10-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC DY252_03160 e2f29a4f183cfb5d48822b4643b14662 346 Gene3D G3DSA:3.40.50.720 179 328 1.7E-36 T 31-10-2018 DY252_03160 e2f29a4f183cfb5d48822b4643b14662 346 Pfam PF13478 XdhC Rossmann domain 180 322 1.4E-35 T 31-10-2018 IPR027051 XdhC Rossmann domain DY252_07645 6213fcaba1ff1c6d832c7636ab525719 677 Pfam PF02195 ParB-like nuclease domain 15 109 6.7E-8 T 31-10-2018 IPR003115 ParB/Sulfiredoxin DY252_07645 6213fcaba1ff1c6d832c7636ab525719 677 SUPERFAMILY SSF109709 107 199 1.26E-20 T 31-10-2018 DY252_07645 6213fcaba1ff1c6d832c7636ab525719 677 Gene3D G3DSA:3.90.1530.30 28 101 1.3E-8 T 31-10-2018 DY252_07645 6213fcaba1ff1c6d832c7636ab525719 677 SUPERFAMILY SSF110849 14 116 5.06E-13 T 31-10-2018 IPR036086 ParB/Sulfiredoxin superfamily DY252_07645 6213fcaba1ff1c6d832c7636ab525719 677 SMART SM00470 13 114 2.9E-8 T 31-10-2018 IPR003115 ParB/Sulfiredoxin DY252_07645 6213fcaba1ff1c6d832c7636ab525719 677 Gene3D G3DSA:1.10.10.2830 102 207 5.3E-16 T 31-10-2018 DY252_16130 3561febba6d597eb3673b14a6d35f0d3 212 SUPERFAMILY SSF48498 88 210 5.51E-35 T 31-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DY252_16130 3561febba6d597eb3673b14a6d35f0d3 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 1.7E-7 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_16130 3561febba6d597eb3673b14a6d35f0d3 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 1.7E-7 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_16130 3561febba6d597eb3673b14a6d35f0d3 212 SUPERFAMILY SSF46689 13 90 9.48E-19 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_16130 3561febba6d597eb3673b14a6d35f0d3 212 Gene3D G3DSA:1.10.357.10 70 210 9.4E-47 T 31-10-2018 DY252_16130 3561febba6d597eb3673b14a6d35f0d3 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 9.3E-14 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_16130 3561febba6d597eb3673b14a6d35f0d3 212 Pfam PF08362 YcdC-like protein, C-terminal region 70 210 2.5E-46 T 31-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 DY252_16130 3561febba6d597eb3673b14a6d35f0d3 212 Gene3D G3DSA:1.10.10.60 4 69 9.8E-18 T 31-10-2018 DY252_10405 15113a7412d9fd1fe6034579ddd9a507 347 SUPERFAMILY SSF52151 12 331 1.05E-50 T 31-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DY252_10405 15113a7412d9fd1fe6034579ddd9a507 347 Pfam PF01734 Patatin-like phospholipase 17 208 6.7E-19 T 31-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DY252_10405 15113a7412d9fd1fe6034579ddd9a507 347 Gene3D G3DSA:3.40.1090.10 1 124 5.2E-15 T 31-10-2018 DY252_10405 15113a7412d9fd1fe6034579ddd9a507 347 Gene3D G3DSA:3.40.1090.10 138 286 1.8E-12 T 31-10-2018 DY252_13560 56bd066a11b7bbd47f52b1ff70d6968c 487 Gene3D G3DSA:3.40.50.10260 3 209 1.1E-63 T 31-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 DY252_13560 56bd066a11b7bbd47f52b1ff70d6968c 487 PIRSF PIRSF017184 2 482 4.9E-111 T 31-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 DY252_13560 56bd066a11b7bbd47f52b1ff70d6968c 487 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 421 431 - T 31-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site DY252_13560 56bd066a11b7bbd47f52b1ff70d6968c 487 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 6 202 25.177 T 31-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DY252_13560 56bd066a11b7bbd47f52b1ff70d6968c 487 Gene3D G3DSA:3.40.1190.20 221 485 2.2E-67 T 31-10-2018 IPR029056 Ribokinase-like DY252_13560 56bd066a11b7bbd47f52b1ff70d6968c 487 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 231 457 6.7E-51 T 31-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DY252_13560 56bd066a11b7bbd47f52b1ff70d6968c 487 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 217 481 17.676 T 31-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DY252_13560 56bd066a11b7bbd47f52b1ff70d6968c 487 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 5 202 2.8E-43 T 31-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DY252_13560 56bd066a11b7bbd47f52b1ff70d6968c 487 SUPERFAMILY SSF53613 215 479 8.11E-59 T 31-10-2018 IPR029056 Ribokinase-like DY252_13560 56bd066a11b7bbd47f52b1ff70d6968c 487 SUPERFAMILY SSF64153 3 239 3.66E-62 T 31-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 DY252_13560 56bd066a11b7bbd47f52b1ff70d6968c 487 Pfam PF03853 YjeF-related protein N-terminus 25 181 2.7E-40 T 31-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DY252_13560 56bd066a11b7bbd47f52b1ff70d6968c 487 Pfam PF01256 Carbohydrate kinase 243 459 1.1E-49 T 31-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DY252_07320 765f8a790c8e4f3b2cc8126e57fe5b2b 615 Gene3D G3DSA:3.30.300.30 469 597 3.2E-6 T 31-10-2018 DY252_07320 765f8a790c8e4f3b2cc8126e57fe5b2b 615 Gene3D G3DSA:3.40.50.12780 3 304 3.1E-51 T 31-10-2018 DY252_07320 765f8a790c8e4f3b2cc8126e57fe5b2b 615 Gene3D G3DSA:3.40.50.12780 329 468 1.2E-34 T 31-10-2018 DY252_07320 765f8a790c8e4f3b2cc8126e57fe5b2b 615 SUPERFAMILY SSF56801 10 601 9.42E-115 T 31-10-2018 DY252_07320 765f8a790c8e4f3b2cc8126e57fe5b2b 615 Pfam PF00501 AMP-binding enzyme 17 470 3.9E-91 T 31-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DY252_00875 8c1c4a0ce833fb8705da9be39738640b 344 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 24 338 4.3E-118 T 31-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DY252_00875 8c1c4a0ce833fb8705da9be39738640b 344 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 23 340 34.205 T 31-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DY252_00875 8c1c4a0ce833fb8705da9be39738640b 344 SUPERFAMILY SSF52733 15 339 4.71E-111 T 31-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DY252_00875 8c1c4a0ce833fb8705da9be39738640b 344 Gene3D G3DSA:3.40.50.10210 67 321 1.3E-109 T 31-10-2018 DY252_00875 8c1c4a0ce833fb8705da9be39738640b 344 Gene3D G3DSA:1.10.1610.10 22 330 1.3E-109 T 31-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DY252_00875 8c1c4a0ce833fb8705da9be39738640b 344 Pfam PF02277 Phosphoribosyltransferase 22 338 3.4E-117 T 31-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DY252_15375 7ae6e5a39374120a476a22aac4c9e43f 431 SUPERFAMILY SSF56349 195 414 6.77E-24 T 31-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DY252_15375 7ae6e5a39374120a476a22aac4c9e43f 431 Gene3D G3DSA:1.10.150.130 68 153 2.8E-7 T 31-10-2018 IPR010998 Integrase/recombinase, N-terminal DY252_15375 7ae6e5a39374120a476a22aac4c9e43f 431 Pfam PF00589 Phage integrase family 219 409 1.8E-17 T 31-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DY252_15375 7ae6e5a39374120a476a22aac4c9e43f 431 Gene3D G3DSA:1.10.443.10 188 412 1.1E-26 T 31-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DY252_13645 93314a47a8e084475dda0f5968d0847c 499 Gene3D G3DSA:1.10.287.130 217 322 4.7E-15 T 31-10-2018 DY252_13645 93314a47a8e084475dda0f5968d0847c 499 SMART SM00388 269 332 1.0E-4 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_13645 93314a47a8e084475dda0f5968d0847c 499 SMART SM00387 390 499 2.1E-31 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_13645 93314a47a8e084475dda0f5968d0847c 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 477 7.9E-16 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_13645 93314a47a8e084475dda0f5968d0847c 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 438 7.9E-16 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_13645 93314a47a8e084475dda0f5968d0847c 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 452 7.9E-16 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_13645 93314a47a8e084475dda0f5968d0847c 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 496 7.9E-16 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_13645 93314a47a8e084475dda0f5968d0847c 499 Gene3D G3DSA:3.30.565.10 377 499 6.8E-33 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_13645 93314a47a8e084475dda0f5968d0847c 499 SUPERFAMILY SSF55874 382 497 1.44E-33 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_13645 93314a47a8e084475dda0f5968d0847c 499 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 393 497 4.4E-22 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_13645 93314a47a8e084475dda0f5968d0847c 499 Pfam PF00512 His Kinase A (phospho-acceptor) domain 270 321 1.9E-6 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_13645 93314a47a8e084475dda0f5968d0847c 499 SUPERFAMILY SSF47384 252 321 4.12E-10 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_15755 1a54d116af33b0bb6710955c893a5e9d 514 Pfam PF01266 FAD dependent oxidoreductase 8 328 1.3E-50 T 31-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DY252_15755 1a54d116af33b0bb6710955c893a5e9d 514 Gene3D G3DSA:3.50.50.60 8 377 2.6E-135 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_15755 1a54d116af33b0bb6710955c893a5e9d 514 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 363 373 - T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_15755 1a54d116af33b0bb6710955c893a5e9d 514 Gene3D G3DSA:1.10.8.870 404 473 1.1E-21 T 31-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_15755 1a54d116af33b0bb6710955c893a5e9d 514 Gene3D G3DSA:3.30.9.10 85 329 2.6E-135 T 31-10-2018 DY252_15755 1a54d116af33b0bb6710955c893a5e9d 514 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 36 48 1.9E-28 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_15755 1a54d116af33b0bb6710955c893a5e9d 514 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 7 19 1.9E-28 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_15755 1a54d116af33b0bb6710955c893a5e9d 514 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 30 1.9E-28 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_15755 1a54d116af33b0bb6710955c893a5e9d 514 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 322 328 1.9E-28 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_15755 1a54d116af33b0bb6710955c893a5e9d 514 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 81 93 1.9E-28 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_15755 1a54d116af33b0bb6710955c893a5e9d 514 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 358 370 1.9E-28 T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_15755 1a54d116af33b0bb6710955c893a5e9d 514 SUPERFAMILY SSF54373 235 328 8.63E-7 T 31-10-2018 DY252_15755 1a54d116af33b0bb6710955c893a5e9d 514 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 12 29 - T 31-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_15755 1a54d116af33b0bb6710955c893a5e9d 514 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 392 487 5.1E-11 T 31-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DY252_15755 1a54d116af33b0bb6710955c893a5e9d 514 SUPERFAMILY SSF51905 6 387 1.71E-34 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_07575 e349e088a9719367cb6acd401698a57e 473 Pfam PF13454 FAD-NAD(P)-binding 7 160 5.8E-29 T 31-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain DY252_07575 e349e088a9719367cb6acd401698a57e 473 Gene3D G3DSA:3.50.50.60 64 385 1.9E-10 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_07575 e349e088a9719367cb6acd401698a57e 473 SUPERFAMILY SSF51905 1 288 1.29E-14 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_02355 ad091b2b36c3237d3fbd1175807390fd 441 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 245 282 - T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_02355 ad091b2b36c3237d3fbd1175807390fd 441 SUPERFAMILY SSF53383 29 430 2.78E-116 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_02355 ad091b2b36c3237d3fbd1175807390fd 441 PIRSF PIRSF000521 133 433 1.7E-32 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_02355 ad091b2b36c3237d3fbd1175807390fd 441 PIRSF PIRSF000521 28 138 6.9E-4 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_02355 ad091b2b36c3237d3fbd1175807390fd 441 Pfam PF00202 Aminotransferase class-III 28 429 7.4E-113 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_02355 ad091b2b36c3237d3fbd1175807390fd 441 Gene3D G3DSA:3.40.640.10 68 327 1.7E-135 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_02355 ad091b2b36c3237d3fbd1175807390fd 441 Gene3D G3DSA:3.90.1150.10 14 427 1.7E-135 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_00245 c254fa062d560fdce1e43fea23f6c154 700 SUPERFAMILY SSF51735 438 694 1.03E-64 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_00245 c254fa062d560fdce1e43fea23f6c154 700 Gene3D G3DSA:3.40.225.10 25 235 1.0E-49 T 31-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DY252_00245 c254fa062d560fdce1e43fea23f6c154 700 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 27 223 1.2E-23 T 31-10-2018 IPR001303 Class II aldolase/adducin N-terminal DY252_00245 c254fa062d560fdce1e43fea23f6c154 700 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 516 527 1.8E-24 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_00245 c254fa062d560fdce1e43fea23f6c154 700 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 658 678 1.8E-24 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_00245 c254fa062d560fdce1e43fea23f6c154 700 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 564 580 1.8E-24 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_00245 c254fa062d560fdce1e43fea23f6c154 700 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 611 628 1.8E-24 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_00245 c254fa062d560fdce1e43fea23f6c154 700 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 440 457 1.8E-24 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_00245 c254fa062d560fdce1e43fea23f6c154 700 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 590 609 1.8E-24 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_00245 c254fa062d560fdce1e43fea23f6c154 700 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 446 693 1.5E-47 T 31-10-2018 DY252_00245 c254fa062d560fdce1e43fea23f6c154 700 SMART SM01007 27 229 5.8E-36 T 31-10-2018 IPR001303 Class II aldolase/adducin N-terminal DY252_00245 c254fa062d560fdce1e43fea23f6c154 700 Gene3D G3DSA:3.40.50.720 419 697 7.7E-69 T 31-10-2018 DY252_00245 c254fa062d560fdce1e43fea23f6c154 700 SUPERFAMILY SSF53639 26 236 8.24E-33 T 31-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DY252_00245 c254fa062d560fdce1e43fea23f6c154 700 TIGRFAM TIGR02632 RhaD_aldol-ADH: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase 26 700 0.0 T 31-10-2018 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase DY252_02080 a2db6e787b50f85aa21ca5f8ad8cdf6e 184 Pfam PF02563 Polysaccharide biosynthesis/export protein 31 105 5.9E-15 T 31-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 DY252_02080 a2db6e787b50f85aa21ca5f8ad8cdf6e 184 Gene3D G3DSA:3.10.560.10 105 180 7.8E-9 T 31-10-2018 DY252_02080 a2db6e787b50f85aa21ca5f8ad8cdf6e 184 Gene3D G3DSA:3.30.1950.10 39 104 8.2E-9 T 31-10-2018 DY252_02080 a2db6e787b50f85aa21ca5f8ad8cdf6e 184 Pfam PF10531 SLBB domain 112 155 2.0E-8 T 31-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_20600 10752cb694a2c08649997c26fb6e80ad 179 Gene3D G3DSA:2.40.128.270 62 174 2.3E-20 T 31-10-2018 IPR038670 HslJ-like superfamily DY252_20600 10752cb694a2c08649997c26fb6e80ad 179 Pfam PF03724 META domain 64 172 1.2E-24 T 31-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ DY252_02555 fc3005baaedcaef244b5f1e9f5fa9485 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 113 131 1.0E-16 T 31-10-2018 DY252_02555 fc3005baaedcaef244b5f1e9f5fa9485 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.0E-16 T 31-10-2018 DY252_02555 fc3005baaedcaef244b5f1e9f5fa9485 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 1.0E-16 T 31-10-2018 DY252_02555 fc3005baaedcaef244b5f1e9f5fa9485 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 294 1.0E-16 T 31-10-2018 DY252_02555 fc3005baaedcaef244b5f1e9f5fa9485 340 SUPERFAMILY SSF51905 8 317 1.28E-42 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_02555 fc3005baaedcaef244b5f1e9f5fa9485 340 Gene3D G3DSA:3.50.50.60 129 252 2.5E-101 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_02555 fc3005baaedcaef244b5f1e9f5fa9485 340 Gene3D G3DSA:3.50.50.60 9 314 2.5E-101 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_02555 fc3005baaedcaef244b5f1e9f5fa9485 340 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 299 1.8E-32 T 31-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DY252_02555 fc3005baaedcaef244b5f1e9f5fa9485 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 209 225 9.3E-18 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_02555 fc3005baaedcaef244b5f1e9f5fa9485 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 9.3E-18 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_02555 fc3005baaedcaef244b5f1e9f5fa9485 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 9.3E-18 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_02555 fc3005baaedcaef244b5f1e9f5fa9485 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 154 178 9.3E-18 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_02555 fc3005baaedcaef244b5f1e9f5fa9485 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 114 122 9.3E-18 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_02555 fc3005baaedcaef244b5f1e9f5fa9485 340 Hamap MF_01685 Ferredoxin--NADP reductase. 7 335 41.536 T 31-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 DY252_14800 15750461dceabe50895ddc579d848332 1172 Pfam PF13502 AsmA-like C-terminal region 973 1147 1.8E-16 T 31-10-2018 IPR032712 AsmA-like, C-terminal DY252_14800 15750461dceabe50895ddc579d848332 1172 Pfam PF13116 Protein of unknown function 425 696 1.5E-14 T 31-10-2018 IPR025263 Domain of unknown function DUF3971 DY252_06710 5a74944b83717d72edd427512b6bc9d7 460 SUPERFAMILY SSF53383 23 452 1.14E-120 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_06710 5a74944b83717d72edd427512b6bc9d7 460 Gene3D G3DSA:3.90.1150.10 31 450 6.7E-151 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_06710 5a74944b83717d72edd427512b6bc9d7 460 Pfam PF00202 Aminotransferase class-III 27 449 9.5E-97 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_06710 5a74944b83717d72edd427512b6bc9d7 460 Gene3D G3DSA:3.40.640.10 63 341 6.7E-151 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_06710 5a74944b83717d72edd427512b6bc9d7 460 PIRSF PIRSF000521 17 407 3.4E-31 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_19040 a9ad16fff8bca5f8aa69bf507cc39e8a 525 PIRSF PIRSF019251 1 167 1.8E-29 T 31-10-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 DY252_19040 a9ad16fff8bca5f8aa69bf507cc39e8a 525 PIRSF PIRSF019251 166 518 1.1E-96 T 31-10-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 DY252_19040 a9ad16fff8bca5f8aa69bf507cc39e8a 525 Gene3D G3DSA:1.10.260.40 4 83 1.5E-13 T 31-10-2018 DY252_19040 a9ad16fff8bca5f8aa69bf507cc39e8a 525 SUPERFAMILY SSF47413 6 69 3.22E-14 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_19040 a9ad16fff8bca5f8aa69bf507cc39e8a 525 SMART SM00530 10 65 6.6E-12 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_19040 a9ad16fff8bca5f8aa69bf507cc39e8a 525 Pfam PF01381 Helix-turn-helix 12 62 1.6E-9 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_19040 a9ad16fff8bca5f8aa69bf507cc39e8a 525 Pfam PF06114 IrrE N-terminal-like domain 253 375 1.8E-10 T 31-10-2018 IPR010359 IrrE N-terminal-like domain DY252_19040 a9ad16fff8bca5f8aa69bf507cc39e8a 525 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 376 516 1.3E-51 T 31-10-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator DY252_12940 f6d93fec2b250fb1232b759f2a727b4e 296 Gene3D G3DSA:3.40.50.720 1 164 4.9E-52 T 31-10-2018 DY252_12940 f6d93fec2b250fb1232b759f2a727b4e 296 SUPERFAMILY SSF51735 2 163 6.15E-43 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_12940 f6d93fec2b250fb1232b759f2a727b4e 296 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 292 1.8E-126 T 31-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 DY252_12940 f6d93fec2b250fb1232b759f2a727b4e 296 SUPERFAMILY SSF48179 163 293 6.8E-42 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_12940 f6d93fec2b250fb1232b759f2a727b4e 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 9.8E-49 T 31-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DY252_12940 f6d93fec2b250fb1232b759f2a727b4e 296 Gene3D G3DSA:1.10.1040.10 165 295 1.4E-44 T 31-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DY252_12940 f6d93fec2b250fb1232b759f2a727b4e 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 292 2.1E-42 T 31-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DY252_12940 f6d93fec2b250fb1232b759f2a727b4e 296 PIRSF PIRSF000103 1 296 1.6E-79 T 31-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DY252_12940 f6d93fec2b250fb1232b759f2a727b4e 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 31-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 DY252_07460 f37858fa5055f139d8c3d6c8ea4ed33d 326 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 325 1.9E-147 T 31-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 DY252_07460 f37858fa5055f139d8c3d6c8ea4ed33d 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 87 3.6E-10 T 31-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DY252_07460 f37858fa5055f139d8c3d6c8ea4ed33d 326 SMART SM00829 8 323 1.0E-53 T 31-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DY252_07460 f37858fa5055f139d8c3d6c8ea4ed33d 326 Pfam PF00107 Zinc-binding dehydrogenase 151 266 6.7E-31 T 31-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DY252_07460 f37858fa5055f139d8c3d6c8ea4ed33d 326 Gene3D G3DSA:3.40.50.720 120 262 1.5E-111 T 31-10-2018 DY252_07460 f37858fa5055f139d8c3d6c8ea4ed33d 326 SUPERFAMILY SSF51735 111 287 3.36E-55 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_07460 f37858fa5055f139d8c3d6c8ea4ed33d 326 Gene3D G3DSA:3.90.180.10 15 323 1.5E-111 T 31-10-2018 DY252_07460 f37858fa5055f139d8c3d6c8ea4ed33d 326 SUPERFAMILY SSF50129 1 140 3.46E-39 T 31-10-2018 IPR011032 GroES-like superfamily DY252_17750 b35650dfa32f92173af7816b2c97624e 528 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 148 359 1.5E-72 T 31-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DY252_17750 b35650dfa32f92173af7816b2c97624e 528 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 8 435 6.7E-162 T 31-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DY252_17750 b35650dfa32f92173af7816b2c97624e 528 Gene3D G3DSA:3.40.50.12240 13 440 5.5E-141 T 31-10-2018 DY252_17750 b35650dfa32f92173af7816b2c97624e 528 SUPERFAMILY SSF52540 95 363 8.44E-92 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_17750 b35650dfa32f92173af7816b2c97624e 528 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 24 87 5.1E-6 T 31-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DY252_17750 b35650dfa32f92173af7816b2c97624e 528 TIGRFAM TIGR03498 FliI_clade3: flagellar protein export ATPase FliI 22 437 1.2E-202 T 31-10-2018 IPR022426 Flagellum-specific ATP synthase FliI, clade 3 GO:0009288|GO:0016887|GO:0030257|GO:0044781 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DY252_17750 b35650dfa32f92173af7816b2c97624e 528 SMART SM00382 160 344 2.4E-4 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_17750 b35650dfa32f92173af7816b2c97624e 528 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 350 359 - T 31-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DY252_07010 b369a410d5b4feef986b4d5b98806c55 296 Pfam PF12710 haloacid dehalogenase-like hydrolase 86 251 6.0E-19 T 31-10-2018 DY252_07010 b369a410d5b4feef986b4d5b98806c55 296 SUPERFAMILY SSF56784 80 286 2.62E-44 T 31-10-2018 IPR036412 HAD-like superfamily DY252_07010 b369a410d5b4feef986b4d5b98806c55 296 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 84 255 8.3E-31 T 31-10-2018 DY252_07010 b369a410d5b4feef986b4d5b98806c55 296 Gene3D G3DSA:3.40.50.1000 56 287 1.9E-67 T 31-10-2018 IPR023214 HAD superfamily DY252_07010 b369a410d5b4feef986b4d5b98806c55 296 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 76 286 7.5E-71 T 31-10-2018 DY252_16865 740d7d2ad046cd65e30b3f02788999e5 407 Pfam PF07690 Major Facilitator Superfamily 20 314 1.0E-30 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_16865 740d7d2ad046cd65e30b3f02788999e5 407 Gene3D G3DSA:1.20.1250.20 2 399 8.0E-46 T 31-10-2018 DY252_16865 740d7d2ad046cd65e30b3f02788999e5 407 SUPERFAMILY SSF103473 6 397 3.53E-57 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_07130 0736d720255a4c239b4db18c21e9c3a9 544 Gene3D G3DSA:3.10.105.10 299 515 1.5E-166 T 31-10-2018 DY252_07130 0736d720255a4c239b4db18c21e9c3a9 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 88 456 5.2E-80 T 31-10-2018 IPR000914 Solute-binding protein family 5 domain DY252_07130 0736d720255a4c239b4db18c21e9c3a9 544 Gene3D G3DSA:3.90.76.10 77 197 1.5E-166 T 31-10-2018 DY252_07130 0736d720255a4c239b4db18c21e9c3a9 544 SUPERFAMILY SSF53850 39 535 1.36E-131 T 31-10-2018 DY252_07130 0736d720255a4c239b4db18c21e9c3a9 544 PIRSF PIRSF002741 14 542 5.1E-104 T 31-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DY252_07130 0736d720255a4c239b4db18c21e9c3a9 544 Gene3D G3DSA:3.40.190.10 47 527 1.5E-166 T 31-10-2018 DY252_01595 7408fd01e5d0dfe123b3faf28833ac76 162 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 67 149 2.5E-30 T 31-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DY252_01595 7408fd01e5d0dfe123b3faf28833ac76 162 SUPERFAMILY SSF46767 65 150 2.49E-29 T 31-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 DY252_01595 7408fd01e5d0dfe123b3faf28833ac76 162 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 66 147 2.0E-28 T 31-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DY252_01595 7408fd01e5d0dfe123b3faf28833ac76 162 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 5 148 37.889 T 31-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 DY252_01595 7408fd01e5d0dfe123b3faf28833ac76 162 Gene3D G3DSA:3.30.160.70 4 61 5.2E-10 T 31-10-2018 DY252_01595 7408fd01e5d0dfe123b3faf28833ac76 162 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 13 62 8.9E-5 T 31-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DY252_01595 7408fd01e5d0dfe123b3faf28833ac76 162 SUPERFAMILY SSF53155 4 70 1.9E-14 T 31-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DY252_01595 7408fd01e5d0dfe123b3faf28833ac76 162 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 116 122 - T 31-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DY252_01595 7408fd01e5d0dfe123b3faf28833ac76 162 Gene3D G3DSA:1.10.10.10 64 149 7.2E-32 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_07710 9ec3ffaadadbf1e2590ed699f171b7a8 326 Pfam PF00437 Type II/IV secretion system protein 20 290 1.2E-85 T 31-10-2018 IPR001482 Type II/IV secretion system protein DY252_07710 9ec3ffaadadbf1e2590ed699f171b7a8 326 SUPERFAMILY SSF52540 7 290 5.37E-40 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07710 9ec3ffaadadbf1e2590ed699f171b7a8 326 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 9 313 2.1E-123 T 31-10-2018 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 DY252_07710 9ec3ffaadadbf1e2590ed699f171b7a8 326 Gene3D G3DSA:3.30.450.90 15 122 7.1E-15 T 31-10-2018 DY252_07710 9ec3ffaadadbf1e2590ed699f171b7a8 326 Gene3D G3DSA:3.40.50.300 123 317 1.4E-55 T 31-10-2018 DY252_16400 2a0ff792f57164e71a781fbe4d9648a3 128 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 34 115 6.5E-7 T 31-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_16400 2a0ff792f57164e71a781fbe4d9648a3 128 Gene3D G3DSA:1.10.760.10 2 126 6.7E-14 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_16400 2a0ff792f57164e71a781fbe4d9648a3 128 SUPERFAMILY SSF46626 6 119 5.36E-15 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_02995 9302eb9b43f77087c1059d39a475ee15 593 Gene3D G3DSA:3.40.50.300 1 210 4.0E-74 T 31-10-2018 DY252_02995 9302eb9b43f77087c1059d39a475ee15 593 Gene3D G3DSA:3.40.50.300 214 378 1.1E-51 T 31-10-2018 DY252_02995 9302eb9b43f77087c1059d39a475ee15 593 Pfam PF00270 DEAD/DEAH box helicase 26 196 9.1E-49 T 31-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DY252_02995 9302eb9b43f77087c1059d39a475ee15 593 SUPERFAMILY SSF52540 75 361 1.47E-73 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_02995 9302eb9b43f77087c1059d39a475ee15 593 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 31-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DY252_02995 9302eb9b43f77087c1059d39a475ee15 593 SMART SM00490 259 340 3.4E-33 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_02995 9302eb9b43f77087c1059d39a475ee15 593 Pfam PF00271 Helicase conserved C-terminal domain 231 339 1.3E-31 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_02995 9302eb9b43f77087c1059d39a475ee15 593 SMART SM00487 21 223 1.6E-60 T 31-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DY252_01740 03894425d8038eaaefb326d24d390080 755 Gene3D G3DSA:3.40.50.10950 448 749 3.3E-83 T 31-10-2018 DY252_01740 03894425d8038eaaefb326d24d390080 755 SUPERFAMILY SSF53223 13 165 8.63E-52 T 31-10-2018 DY252_01740 03894425d8038eaaefb326d24d390080 755 Pfam PF03949 Malic enzyme, NAD binding domain 169 364 3.8E-22 T 31-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DY252_01740 03894425d8038eaaefb326d24d390080 755 ProSitePatterns PS00331 Malic enzymes signature. 163 179 - T 31-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 DY252_01740 03894425d8038eaaefb326d24d390080 755 PIRSF PIRSF036684 2 755 0.0 T 31-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 DY252_01740 03894425d8038eaaefb326d24d390080 755 SMART SM01274 22 155 8.8E-78 T 31-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DY252_01740 03894425d8038eaaefb326d24d390080 755 SUPERFAMILY SSF51735 167 446 8.45E-86 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_01740 03894425d8038eaaefb326d24d390080 755 SMART SM00919 167 404 3.6E-140 T 31-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DY252_01740 03894425d8038eaaefb326d24d390080 755 Pfam PF01515 Phosphate acetyl/butaryl transferase 435 749 4.7E-83 T 31-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DY252_01740 03894425d8038eaaefb326d24d390080 755 Gene3D G3DSA:3.40.50.10750 574 725 3.3E-83 T 31-10-2018 DY252_01740 03894425d8038eaaefb326d24d390080 755 Pfam PF00390 Malic enzyme, N-terminal domain 23 155 9.8E-26 T 31-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DY252_01740 03894425d8038eaaefb326d24d390080 755 SUPERFAMILY SSF53659 434 752 1.07E-82 T 31-10-2018 DY252_01740 03894425d8038eaaefb326d24d390080 755 Gene3D G3DSA:3.40.50.10380 3 164 1.4E-64 T 31-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 DY252_01740 03894425d8038eaaefb326d24d390080 755 Gene3D G3DSA:3.40.50.720 165 447 4.3E-83 T 31-10-2018 DY252_01560 ed671594eb3ff6b15b4215790df66de7 421 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 421 247.806 T 31-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 DY252_01560 ed671594eb3ff6b15b4215790df66de7 421 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 420 4.2E-214 T 31-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 DY252_01560 ed671594eb3ff6b15b4215790df66de7 421 Pfam PF07498 Rho termination factor, N-terminal domain 5 46 1.2E-15 T 31-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 DY252_01560 ed671594eb3ff6b15b4215790df66de7 421 SMART SM00959 5 47 5.5E-16 T 31-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 DY252_01560 ed671594eb3ff6b15b4215790df66de7 421 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 1.9E-32 T 31-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 DY252_01560 ed671594eb3ff6b15b4215790df66de7 421 SUPERFAMILY SSF68912 1 46 1.41E-11 T 31-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily DY252_01560 ed671594eb3ff6b15b4215790df66de7 421 SUPERFAMILY SSF50249 49 125 1.71E-29 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_01560 ed671594eb3ff6b15b4215790df66de7 421 SUPERFAMILY SSF52540 90 374 4.18E-66 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_01560 ed671594eb3ff6b15b4215790df66de7 421 Gene3D G3DSA:3.40.50.300 130 420 2.9E-125 T 31-10-2018 DY252_01560 ed671594eb3ff6b15b4215790df66de7 421 Gene3D G3DSA:1.10.720.10 1 45 7.9E-15 T 31-10-2018 DY252_01560 ed671594eb3ff6b15b4215790df66de7 421 SMART SM00382 173 358 3.6E-9 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_01560 ed671594eb3ff6b15b4215790df66de7 421 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 163 366 5.5E-22 T 31-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DY252_01560 ed671594eb3ff6b15b4215790df66de7 421 SMART SM00357 52 118 6.9E-20 T 31-10-2018 IPR011129 Cold shock domain GO:0003676 DY252_01560 ed671594eb3ff6b15b4215790df66de7 421 Gene3D G3DSA:2.40.50.140 47 123 4.8E-35 T 31-10-2018 DY252_19290 cbbb23869226ef019f331ff84bfff6ca 537 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 34 152 7.6E-16 T 31-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DY252_19290 cbbb23869226ef019f331ff84bfff6ca 537 Gene3D G3DSA:1.10.540.10 16 154 3.4E-20 T 31-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DY252_19290 cbbb23869226ef019f331ff84bfff6ca 537 Gene3D G3DSA:2.40.110.10 156 276 1.6E-28 T 31-10-2018 DY252_19290 cbbb23869226ef019f331ff84bfff6ca 537 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 158 262 7.5E-21 T 31-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DY252_19290 cbbb23869226ef019f331ff84bfff6ca 537 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 272 430 4.7E-23 T 31-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DY252_19290 cbbb23869226ef019f331ff84bfff6ca 537 SUPERFAMILY SSF56645 35 264 8.77E-59 T 31-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DY252_19290 cbbb23869226ef019f331ff84bfff6ca 537 Gene3D G3DSA:1.20.140.10 277 432 1.6E-39 T 31-10-2018 DY252_19290 cbbb23869226ef019f331ff84bfff6ca 537 SUPERFAMILY SSF47203 271 434 6.28E-39 T 31-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DY252_02250 acbf4c6ac8df6bae4e59f7980ae97e82 176 Gene3D G3DSA:3.10.129.10 24 143 1.1E-15 T 31-10-2018 DY252_02250 acbf4c6ac8df6bae4e59f7980ae97e82 176 SUPERFAMILY SSF54637 26 165 1.18E-26 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_02250 acbf4c6ac8df6bae4e59f7980ae97e82 176 Pfam PF13279 Thioesterase-like superfamily 33 136 1.8E-18 T 31-10-2018 DY252_21290 165f81ac846a4b10b0c5d8d5a0e9d32b 955 Gene3D G3DSA:3.40.50.10810 33 300 2.1E-55 T 31-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily DY252_21290 165f81ac846a4b10b0c5d8d5a0e9d32b 955 Gene3D G3DSA:3.40.50.300 352 583 6.6E-39 T 31-10-2018 DY252_21290 165f81ac846a4b10b0c5d8d5a0e9d32b 955 SMART SM00490 470 550 2.6E-19 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_21290 165f81ac846a4b10b0c5d8d5a0e9d32b 955 SMART SM00487 33 226 2.8E-21 T 31-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DY252_21290 165f81ac846a4b10b0c5d8d5a0e9d32b 955 SUPERFAMILY SSF52540 153 594 3.49E-43 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_21290 165f81ac846a4b10b0c5d8d5a0e9d32b 955 SUPERFAMILY SSF52540 21 247 7.19E-38 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_21290 165f81ac846a4b10b0c5d8d5a0e9d32b 955 Pfam PF00176 SNF2 family N-terminal domain 48 304 2.3E-32 T 31-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 DY252_21290 165f81ac846a4b10b0c5d8d5a0e9d32b 955 Pfam PF00271 Helicase conserved C-terminal domain 429 550 6.8E-17 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_08125 7133f1a49b9a1517f1ecca797fdb9cfc 392 Pfam PF01546 Peptidase family M20/M25/M40 74 386 6.4E-34 T 31-10-2018 IPR002933 Peptidase M20 GO:0016787 DY252_08125 7133f1a49b9a1517f1ecca797fdb9cfc 392 Pfam PF07687 Peptidase dimerisation domain 179 289 6.2E-21 T 31-10-2018 IPR011650 Peptidase M20, dimerisation domain DY252_08125 7133f1a49b9a1517f1ecca797fdb9cfc 392 Gene3D G3DSA:3.40.630.10 19 376 6.2E-100 T 31-10-2018 DY252_08125 7133f1a49b9a1517f1ecca797fdb9cfc 392 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 108 145 - T 31-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DY252_08125 7133f1a49b9a1517f1ecca797fdb9cfc 392 Gene3D G3DSA:3.30.70.360 182 299 6.2E-100 T 31-10-2018 DY252_08125 7133f1a49b9a1517f1ecca797fdb9cfc 392 SUPERFAMILY SSF55031 185 289 1.57E-21 T 31-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DY252_08125 7133f1a49b9a1517f1ecca797fdb9cfc 392 SUPERFAMILY SSF53187 10 386 3.28E-54 T 31-10-2018 DY252_08125 7133f1a49b9a1517f1ecca797fdb9cfc 392 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 17 386 2.7E-113 T 31-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 DY252_19670 daac5bbb6e602838e7dff5ce45f625d7 366 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 32 38 - T 31-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DY252_19670 daac5bbb6e602838e7dff5ce45f625d7 366 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 212 230 3.3E-39 T 31-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 DY252_19670 daac5bbb6e602838e7dff5ce45f625d7 366 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 77 97 3.3E-39 T 31-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 DY252_19670 daac5bbb6e602838e7dff5ce45f625d7 366 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 28 42 3.3E-39 T 31-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 DY252_19670 daac5bbb6e602838e7dff5ce45f625d7 366 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 193 210 3.3E-39 T 31-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 DY252_19670 daac5bbb6e602838e7dff5ce45f625d7 366 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 235 255 3.3E-39 T 31-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 DY252_19670 daac5bbb6e602838e7dff5ce45f625d7 366 Gene3D G3DSA:3.40.50.150 7 260 7.9E-71 T 31-10-2018 DY252_19670 daac5bbb6e602838e7dff5ce45f625d7 366 Pfam PF01555 DNA methylase 29 251 1.8E-56 T 31-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 DY252_19670 daac5bbb6e602838e7dff5ce45f625d7 366 SUPERFAMILY SSF53335 7 257 3.67E-72 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_14325 99788586e41f71bbff5e347e70e548cb 223 SUPERFAMILY SSF52172 5 135 2.13E-28 T 31-10-2018 IPR011006 CheY-like superfamily DY252_14325 99788586e41f71bbff5e347e70e548cb 223 SMART SM00421 154 211 1.9E-23 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_14325 99788586e41f71bbff5e347e70e548cb 223 Gene3D G3DSA:1.10.10.10 155 222 4.8E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_14325 99788586e41f71bbff5e347e70e548cb 223 Gene3D G3DSA:3.40.50.2300 4 133 8.0E-27 T 31-10-2018 DY252_14325 99788586e41f71bbff5e347e70e548cb 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 211 7.1E-20 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_14325 99788586e41f71bbff5e347e70e548cb 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 1.9E-11 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_14325 99788586e41f71bbff5e347e70e548cb 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 1.9E-11 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_14325 99788586e41f71bbff5e347e70e548cb 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 1.9E-11 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_14325 99788586e41f71bbff5e347e70e548cb 223 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_14325 99788586e41f71bbff5e347e70e548cb 223 SMART SM00448 5 120 8.1E-24 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_14325 99788586e41f71bbff5e347e70e548cb 223 Pfam PF00072 Response regulator receiver domain 7 117 5.8E-24 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_14325 99788586e41f71bbff5e347e70e548cb 223 SUPERFAMILY SSF46894 150 217 8.84E-20 T 31-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DY252_10370 9c14599a31fa8c98f9b534b8d50f14d3 325 Pfam PF09084 NMT1/THI5 like 41 246 2.7E-30 T 31-10-2018 IPR015168 SsuA/THI5-like DY252_10370 9c14599a31fa8c98f9b534b8d50f14d3 325 Gene3D G3DSA:3.40.190.10 131 316 7.3E-24 T 31-10-2018 DY252_10370 9c14599a31fa8c98f9b534b8d50f14d3 325 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 31 262 1.3E-48 T 31-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 DY252_10370 9c14599a31fa8c98f9b534b8d50f14d3 325 SUPERFAMILY SSF53850 28 247 2.28E-43 T 31-10-2018 DY252_10370 9c14599a31fa8c98f9b534b8d50f14d3 325 SMART SM00062 29 237 2.4E-4 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_10370 9c14599a31fa8c98f9b534b8d50f14d3 325 Gene3D G3DSA:3.40.190.10 24 125 2.1E-16 T 31-10-2018 DY252_08360 711baaadd12d9c63a54a7f43bbff63a8 234 Gene3D G3DSA:1.10.10.10 1 63 1.2E-14 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_08360 711baaadd12d9c63a54a7f43bbff63a8 234 SUPERFAMILY SSF46785 1 61 1.21E-11 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_08360 711baaadd12d9c63a54a7f43bbff63a8 234 Pfam PF13280 WYL domain 137 220 4.1E-17 T 31-10-2018 IPR026881 WYL domain DY252_08360 711baaadd12d9c63a54a7f43bbff63a8 234 Pfam PF08279 HTH domain 6 59 3.5E-14 T 31-10-2018 IPR013196 Helix-turn-helix, type 11 DY252_09870 1a739bc31ca9083f4aebf0384ae84de0 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.8E-9 T 31-10-2018 DY252_09870 1a739bc31ca9083f4aebf0384ae84de0 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 294 301 2.8E-9 T 31-10-2018 DY252_09870 1a739bc31ca9083f4aebf0384ae84de0 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 183 2.8E-9 T 31-10-2018 DY252_09870 1a739bc31ca9083f4aebf0384ae84de0 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 9.3E-12 T 31-10-2018 DY252_09870 1a739bc31ca9083f4aebf0384ae84de0 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 98 116 9.3E-12 T 31-10-2018 DY252_09870 1a739bc31ca9083f4aebf0384ae84de0 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 279 301 9.3E-12 T 31-10-2018 DY252_09870 1a739bc31ca9083f4aebf0384ae84de0 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 9.3E-12 T 31-10-2018 DY252_09870 1a739bc31ca9083f4aebf0384ae84de0 419 SUPERFAMILY SSF51905 5 335 1.04E-33 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_09870 1a739bc31ca9083f4aebf0384ae84de0 419 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 322 3.6E-48 T 31-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DY252_09870 1a739bc31ca9083f4aebf0384ae84de0 419 Gene3D G3DSA:3.50.50.100 1 395 4.8E-119 T 31-10-2018 DY252_22005 1d9d6d9360d4482471728b32cf81810d 259 Gene3D G3DSA:3.40.50.720 1 259 8.5E-68 T 31-10-2018 DY252_22005 1d9d6d9360d4482471728b32cf81810d 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.1E-31 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_22005 1d9d6d9360d4482471728b32cf81810d 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.1E-31 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_22005 1d9d6d9360d4482471728b32cf81810d 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.1E-31 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_22005 1d9d6d9360d4482471728b32cf81810d 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.1E-31 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_22005 1d9d6d9360d4482471728b32cf81810d 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.1E-31 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_22005 1d9d6d9360d4482471728b32cf81810d 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.1E-31 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_22005 1d9d6d9360d4482471728b32cf81810d 259 SUPERFAMILY SSF51735 8 255 8.38E-60 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_22005 1d9d6d9360d4482471728b32cf81810d 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 2.2E-6 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_22005 1d9d6d9360d4482471728b32cf81810d 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.2E-6 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_22005 1d9d6d9360d4482471728b32cf81810d 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.2E-6 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_22005 1d9d6d9360d4482471728b32cf81810d 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_22005 1d9d6d9360d4482471728b32cf81810d 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 254 7.7E-39 T 31-10-2018 DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 SUPERFAMILY SSF52172 1056 1173 1.02E-26 T 31-10-2018 IPR011006 CheY-like superfamily DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 SMART SM00387 913 1036 7.4E-29 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 Pfam PF00512 His Kinase A (phospho-acceptor) domain 810 869 7.9E-9 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 514 638 4.7E-24 T 31-10-2018 IPR000014 PAS domain DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 383 505 2.9E-16 T 31-10-2018 IPR000014 PAS domain DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 SMART SM00388 806 872 1.4E-8 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 SUPERFAMILY SSF55781 229 365 7.85E-12 T 31-10-2018 DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 SMART SM00091 517 583 5.3E-14 T 31-10-2018 IPR000014 PAS domain DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 SMART SM00091 382 450 0.017 T 31-10-2018 IPR000014 PAS domain DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 Pfam PF08448 PAS fold 523 633 2.5E-15 T 31-10-2018 IPR013656 PAS fold-4 DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 SUPERFAMILY SSF55785 506 629 1.29E-26 T 31-10-2018 IPR035965 PAS domain superfamily DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1020 1033 4.0E-17 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 PRINTS PR00344 Bacterial sensor protein C-terminal signature 996 1014 4.0E-17 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 PRINTS PR00344 Bacterial sensor protein C-terminal signature 983 993 4.0E-17 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 PRINTS PR00344 Bacterial sensor protein C-terminal signature 965 979 4.0E-17 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 Gene3D G3DSA:3.30.450.20 396 512 2.0E-18 T 31-10-2018 DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 Gene3D G3DSA:3.30.450.20 513 643 3.8E-27 T 31-10-2018 DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 SMART SM00448 1055 1168 7.8E-22 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 SUPERFAMILY SSF55781 653 795 1.96E-8 T 31-10-2018 DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 SUPERFAMILY SSF55874 862 1035 3.01E-37 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 Gene3D G3DSA:3.40.50.2300 1049 1174 4.6E-27 T 31-10-2018 DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 Pfam PF00072 Response regulator receiver domain 1058 1166 4.4E-20 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 Pfam PF01590 GAF domain 228 364 4.1E-7 T 31-10-2018 IPR003018 GAF domain GO:0005515 DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 SUPERFAMILY SSF47384 798 869 3.73E-10 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 SUPERFAMILY SSF55785 398 506 8.05E-19 T 31-10-2018 IPR035965 PAS domain superfamily DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 Pfam PF13426 PAS domain 399 497 2.2E-10 T 31-10-2018 IPR000014 PAS domain DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 Gene3D G3DSA:3.30.450.40 184 375 1.2E-8 T 31-10-2018 IPR029016 GAF-like domain superfamily DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 914 1034 5.5E-19 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 Gene3D G3DSA:1.10.287.130 798 870 6.6E-21 T 31-10-2018 DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 Gene3D G3DSA:3.30.565.10 873 1046 1.4E-42 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 SMART SM00086 589 631 1.1E-4 T 31-10-2018 IPR001610 PAC motif DY252_06370 181e8081e1c267a68f7c08df7eb9d186 1192 SMART SM00086 456 498 9.9E-6 T 31-10-2018 IPR001610 PAC motif DY252_01235 990e1486ba5486a8ffa6d5fc8e6c7e6b 408 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 191 376 5.2E-68 T 31-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DY252_01235 990e1486ba5486a8ffa6d5fc8e6c7e6b 408 SUPERFAMILY SSF102645 189 407 5.75E-69 T 31-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DY252_01235 990e1486ba5486a8ffa6d5fc8e6c7e6b 408 Gene3D G3DSA:3.40.50.10300 188 408 2.6E-71 T 31-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DY252_01235 990e1486ba5486a8ffa6d5fc8e6c7e6b 408 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 5 399 2.7E-118 T 31-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 DY252_01235 990e1486ba5486a8ffa6d5fc8e6c7e6b 408 SUPERFAMILY SSF52507 4 182 2.88E-57 T 31-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DY252_01235 990e1486ba5486a8ffa6d5fc8e6c7e6b 408 Gene3D G3DSA:3.40.50.1950 3 187 9.6E-55 T 31-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DY252_01235 990e1486ba5486a8ffa6d5fc8e6c7e6b 408 Pfam PF02441 Flavoprotein 8 181 1.2E-40 T 31-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DY252_13380 4bfe907bc36df713924d3eb8c6e402eb 1161 SMART SM00481 6 73 1.2E-19 T 31-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DY252_13380 4bfe907bc36df713924d3eb8c6e402eb 1161 Pfam PF14579 Helix-hairpin-helix motif 814 904 9.1E-29 T 31-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DY252_13380 4bfe907bc36df713924d3eb8c6e402eb 1161 Pfam PF02811 PHP domain 7 181 1.9E-33 T 31-10-2018 IPR004013 PHP domain GO:0003824 DY252_13380 4bfe907bc36df713924d3eb8c6e402eb 1161 Gene3D G3DSA:1.10.10.1600 446 521 4.2E-25 T 31-10-2018 DY252_13380 4bfe907bc36df713924d3eb8c6e402eb 1161 Gene3D G3DSA:3.20.20.140 1 276 2.7E-82 T 31-10-2018 DY252_13380 4bfe907bc36df713924d3eb8c6e402eb 1161 SUPERFAMILY SSF89550 5 270 2.75E-13 T 31-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DY252_13380 4bfe907bc36df713924d3eb8c6e402eb 1161 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1041 0.0 T 31-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DY252_13380 4bfe907bc36df713924d3eb8c6e402eb 1161 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 299 740 2.1E-175 T 31-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DY252_19335 9de441f651b331a45e90db3f4498e194 584 Gene3D G3DSA:1.20.1480.50 255 347 2.4E-12 T 31-10-2018 DY252_19335 9de441f651b331a45e90db3f4498e194 584 SMART SM00387 458 564 2.0E-29 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_19335 9de441f651b331a45e90db3f4498e194 584 SUPERFAMILY SSF55874 418 562 1.07E-37 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_19335 9de441f651b331a45e90db3f4498e194 584 SMART SM00304 289 342 1.3E-10 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_19335 9de441f651b331a45e90db3f4498e194 584 SUPERFAMILY SSF47384 346 414 8.44E-14 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_19335 9de441f651b331a45e90db3f4498e194 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 542 2.6E-14 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_19335 9de441f651b331a45e90db3f4498e194 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 548 561 2.6E-14 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_19335 9de441f651b331a45e90db3f4498e194 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 523 2.6E-14 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_19335 9de441f651b331a45e90db3f4498e194 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 509 2.6E-14 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_19335 9de441f651b331a45e90db3f4498e194 584 SMART SM00388 352 417 3.4E-14 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_19335 9de441f651b331a45e90db3f4498e194 584 SUPERFAMILY SSF158472 289 341 6.8E-9 T 31-10-2018 DY252_19335 9de441f651b331a45e90db3f4498e194 584 Pfam PF00512 His Kinase A (phospho-acceptor) domain 353 415 4.6E-14 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_19335 9de441f651b331a45e90db3f4498e194 584 Gene3D G3DSA:3.30.565.10 419 573 4.1E-40 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_19335 9de441f651b331a45e90db3f4498e194 584 Pfam PF00672 HAMP domain 289 334 7.4E-10 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_19335 9de441f651b331a45e90db3f4498e194 584 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 459 563 9.7E-21 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_19335 9de441f651b331a45e90db3f4498e194 584 Gene3D G3DSA:1.10.287.130 348 414 4.7E-15 T 31-10-2018 DY252_11525 2a69ad52697e55498fe5ea137eea7f9e 642 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_11525 2a69ad52697e55498fe5ea137eea7f9e 642 Pfam PF00005 ABC transporter 25 191 1.1E-24 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_11525 2a69ad52697e55498fe5ea137eea7f9e 642 SMART SM00382 33 241 3.1E-16 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_11525 2a69ad52697e55498fe5ea137eea7f9e 642 SMART SM00382 359 556 2.2E-19 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_11525 2a69ad52697e55498fe5ea137eea7f9e 642 SUPERFAMILY SSF52540 4 263 1.93E-60 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_11525 2a69ad52697e55498fe5ea137eea7f9e 642 Pfam PF00005 ABC transporter 351 507 5.8E-34 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_11525 2a69ad52697e55498fe5ea137eea7f9e 642 SUPERFAMILY SSF52540 323 578 4.73E-72 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_11525 2a69ad52697e55498fe5ea137eea7f9e 642 Gene3D G3DSA:3.40.50.300 320 639 2.5E-88 T 31-10-2018 DY252_11525 2a69ad52697e55498fe5ea137eea7f9e 642 Gene3D G3DSA:3.40.50.300 1 310 4.3E-78 T 31-10-2018 DY252_11525 2a69ad52697e55498fe5ea137eea7f9e 642 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 286 2.3E-5 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_11525 2a69ad52697e55498fe5ea137eea7f9e 642 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 558 585 1.9E-6 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_11605 d0d2fc7ced8efec603e3009c1b171c19 501 Gene3D G3DSA:2.30.42.10 150 237 3.3E-63 T 31-10-2018 DY252_11605 d0d2fc7ced8efec603e3009c1b171c19 501 SMART SM00228 150 221 7.0E-13 T 31-10-2018 IPR001478 PDZ domain GO:0005515 DY252_11605 d0d2fc7ced8efec603e3009c1b171c19 501 SMART SM00245 223 413 1.6E-34 T 31-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DY252_11605 d0d2fc7ced8efec603e3009c1b171c19 501 SUPERFAMILY SSF50156 147 218 1.6E-16 T 31-10-2018 IPR036034 PDZ superfamily GO:0005515 DY252_11605 d0d2fc7ced8efec603e3009c1b171c19 501 Gene3D G3DSA:3.30.750.44 101 388 3.3E-63 T 31-10-2018 DY252_11605 d0d2fc7ced8efec603e3009c1b171c19 501 Pfam PF03572 Peptidase family S41 249 410 6.7E-37 T 31-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DY252_11605 d0d2fc7ced8efec603e3009c1b171c19 501 Pfam PF13180 PDZ domain 148 218 6.5E-10 T 31-10-2018 IPR001478 PDZ domain GO:0005515 DY252_11605 d0d2fc7ced8efec603e3009c1b171c19 501 SUPERFAMILY SSF52096 99 414 1.04E-49 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_11605 d0d2fc7ced8efec603e3009c1b171c19 501 Gene3D G3DSA:3.90.226.10 238 408 3.3E-63 T 31-10-2018 DY252_13345 579a5206bbd6d93af61bc35a797195e1 387 PIRSF PIRSF006205 4 387 3.1E-150 T 31-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DY252_13345 579a5206bbd6d93af61bc35a797195e1 387 Gene3D G3DSA:3.40.50.720 1 150 6.5E-46 T 31-10-2018 DY252_13345 579a5206bbd6d93af61bc35a797195e1 387 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 7 382 45.619 T 31-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DY252_13345 579a5206bbd6d93af61bc35a797195e1 387 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 379 2.7E-140 T 31-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DY252_13345 579a5206bbd6d93af61bc35a797195e1 387 Pfam PF13288 DXP reductoisomerase C-terminal domain 261 377 3.1E-44 T 31-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DY252_13345 579a5206bbd6d93af61bc35a797195e1 387 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 229 8.9E-39 T 31-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DY252_13345 579a5206bbd6d93af61bc35a797195e1 387 SUPERFAMILY SSF55347 126 264 1.93E-59 T 31-10-2018 DY252_13345 579a5206bbd6d93af61bc35a797195e1 387 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 7 132 2.5E-36 T 31-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DY252_13345 579a5206bbd6d93af61bc35a797195e1 387 SUPERFAMILY SSF69055 292 380 1.28E-31 T 31-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DY252_13345 579a5206bbd6d93af61bc35a797195e1 387 SUPERFAMILY SSF51735 5 150 1.44E-41 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_13345 579a5206bbd6d93af61bc35a797195e1 387 Gene3D G3DSA:1.10.1740.10 302 386 1.1E-29 T 31-10-2018 DY252_09415 c2e16cc622abfc51ae49943a9e0c854a 70 SUPERFAMILY SSF81469 38 69 4.71E-7 T 31-10-2018 IPR036596 Bacterial aa3 type cytochrome c oxidase subunit IV superfamily KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 DY252_09415 c2e16cc622abfc51ae49943a9e0c854a 70 Pfam PF07835 Bacterial aa3 type cytochrome c oxidase subunit IV 39 69 4.5E-9 T 31-10-2018 IPR012422 Cytochrome c oxidase, subunit IV, bacterial aa3 type KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 DY252_09415 c2e16cc622abfc51ae49943a9e0c854a 70 Gene3D G3DSA:1.20.5.160 35 68 9.0E-6 T 31-10-2018 IPR036596 Bacterial aa3 type cytochrome c oxidase subunit IV superfamily KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 DY252_17845 041ae64417d235b1d075d34fe44ec1b6 108 SUPERFAMILY SSF49777 13 91 1.7E-13 T 31-10-2018 IPR036610 PEBP-like superfamily DY252_17845 041ae64417d235b1d075d34fe44ec1b6 108 Gene3D G3DSA:3.90.280.10 7 105 6.4E-11 T 31-10-2018 IPR036610 PEBP-like superfamily DY252_17845 041ae64417d235b1d075d34fe44ec1b6 108 Pfam PF01161 Phosphatidylethanolamine-binding protein 18 99 8.8E-12 T 31-10-2018 IPR008914 Phosphatidylethanolamine-binding protein DY252_07365 f12f146b46b64fc0b97957ef99f6616f 67 Gene3D G3DSA:1.20.5.1150 14 52 4.1E-8 T 31-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_07365 f12f146b46b64fc0b97957ef99f6616f 67 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 1 56 1.8E-20 T 31-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_07365 f12f146b46b64fc0b97957ef99f6616f 67 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 40 1.0E-8 T 31-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_07365 f12f146b46b64fc0b97957ef99f6616f 67 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 55 12.467 T 31-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_07365 f12f146b46b64fc0b97957ef99f6616f 67 Pfam PF01165 Ribosomal protein S21 2 55 5.7E-21 T 31-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_07365 f12f146b46b64fc0b97957ef99f6616f 67 ProSitePatterns PS01181 Ribosomal protein S21 signature. 11 23 - T 31-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_00050 50141df13e943f1ca1802fcf03d0c7cb 169 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 154 1.2E-25 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_00640 0c0efb5788621abca3422f0a37ffda4b 307 Gene3D G3DSA:3.90.226.10 57 252 4.7E-63 T 31-10-2018 DY252_00640 0c0efb5788621abca3422f0a37ffda4b 307 SUPERFAMILY SSF52096 43 246 2.93E-38 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_00640 0c0efb5788621abca3422f0a37ffda4b 307 Gene3D G3DSA:3.40.1750.20 149 215 4.7E-63 T 31-10-2018 DY252_00640 0c0efb5788621abca3422f0a37ffda4b 307 Pfam PF01343 Peptidase family S49 112 259 2.9E-45 T 31-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 DY252_00640 0c0efb5788621abca3422f0a37ffda4b 307 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 54 257 9.6E-62 T 31-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 DY252_01920 3af9f9c97015261f79566d622009405b 603 Gene3D G3DSA:3.30.70.870 304 587 2.2E-131 T 31-10-2018 DY252_01920 3af9f9c97015261f79566d622009405b 603 SUPERFAMILY SSF52540 3 204 6.42E-54 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_01920 3af9f9c97015261f79566d622009405b 603 SUPERFAMILY SSF54980 396 510 1.63E-26 T 31-10-2018 IPR035647 EF-G domain III/V-like DY252_01920 3af9f9c97015261f79566d622009405b 603 SUPERFAMILY SSF50447 150 296 4.57E-31 T 31-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DY252_01920 3af9f9c97015261f79566d622009405b 603 SUPERFAMILY SSF54980 300 385 1.87E-11 T 31-10-2018 IPR035647 EF-G domain III/V-like DY252_01920 3af9f9c97015261f79566d622009405b 603 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 138 7.3E-21 T 31-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DY252_01920 3af9f9c97015261f79566d622009405b 603 Pfam PF00009 Elongation factor Tu GTP binding domain 3 193 8.5E-54 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_01920 3af9f9c97015261f79566d622009405b 603 Gene3D G3DSA:2.40.30.10 197 296 2.1E-30 T 31-10-2018 DY252_01920 3af9f9c97015261f79566d622009405b 603 Gene3D G3DSA:3.30.70.240 387 479 2.2E-131 T 31-10-2018 DY252_01920 3af9f9c97015261f79566d622009405b 603 PRINTS PR00315 GTP-binding elongation factor signature 5 18 2.5E-13 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_01920 3af9f9c97015261f79566d622009405b 603 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.5E-13 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_01920 3af9f9c97015261f79566d622009405b 603 PRINTS PR00315 GTP-binding elongation factor signature 121 130 2.5E-13 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_01920 3af9f9c97015261f79566d622009405b 603 PRINTS PR00315 GTP-binding elongation factor signature 69 79 2.5E-13 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_01920 3af9f9c97015261f79566d622009405b 603 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 31-10-2018 IPR031157 Tr-type G domain, conserved site DY252_01920 3af9f9c97015261f79566d622009405b 603 Pfam PF03144 Elongation factor Tu domain 2 217 287 3.2E-12 T 31-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DY252_01920 3af9f9c97015261f79566d622009405b 603 Gene3D G3DSA:3.40.50.300 2 196 8.5E-63 T 31-10-2018 DY252_01920 3af9f9c97015261f79566d622009405b 603 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 3 596 2.2E-284 T 31-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 DY252_01920 3af9f9c97015261f79566d622009405b 603 Gene3D G3DSA:2.40.50.250 480 596 2.2E-131 T 31-10-2018 DY252_01920 3af9f9c97015261f79566d622009405b 603 Pfam PF00679 Elongation factor G C-terminus 394 478 1.6E-20 T 31-10-2018 IPR000640 Elongation factor EFG, domain V-like DY252_01920 3af9f9c97015261f79566d622009405b 603 SMART SM00838 393 481 0.0038 T 31-10-2018 IPR000640 Elongation factor EFG, domain V-like DY252_09535 6eeda0e99c933062b11ee03bffa92fc5 308 Pfam PF05036 Sporulation related domain 234 301 5.8E-5 T 31-10-2018 IPR007730 Sporulation-like domain GO:0042834 DY252_20220 830f5d24a224dd921f65112abb4295e6 510 SUPERFAMILY SSF52540 96 379 7.59E-98 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_20220 830f5d24a224dd921f65112abb4295e6 510 Gene3D G3DSA:2.40.30.20 1 93 1.7E-40 T 31-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DY252_20220 830f5d24a224dd921f65112abb4295e6 510 SUPERFAMILY SSF47917 381 509 1.83E-49 T 31-10-2018 DY252_20220 830f5d24a224dd921f65112abb4295e6 510 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 364 373 - T 31-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DY252_20220 830f5d24a224dd921f65112abb4295e6 510 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 510 51.415 T 31-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20220 830f5d24a224dd921f65112abb4295e6 510 PIRSF PIRSF039088 1 510 1.8E-278 T 31-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20220 830f5d24a224dd921f65112abb4295e6 510 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 510 4.8E-250 T 31-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20220 830f5d24a224dd921f65112abb4295e6 510 Gene3D G3DSA:1.20.150.20 381 510 1.5E-55 T 31-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20220 830f5d24a224dd921f65112abb4295e6 510 SUPERFAMILY SSF50615 10 94 8.37E-30 T 31-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DY252_20220 830f5d24a224dd921f65112abb4295e6 510 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 8.3E-20 T 31-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DY252_20220 830f5d24a224dd921f65112abb4295e6 510 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 380 505 7.7E-51 T 31-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20220 830f5d24a224dd921f65112abb4295e6 510 Gene3D G3DSA:3.40.50.300 94 380 6.1E-128 T 31-10-2018 DY252_20220 830f5d24a224dd921f65112abb4295e6 510 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 373 2.8E-72 T 31-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DY252_04785 6a777cacbe40ceb37bf81090ef764f7d 153 Gene3D G3DSA:3.40.50.280 2 128 4.2E-13 T 31-10-2018 DY252_04785 6a777cacbe40ceb37bf81090ef764f7d 153 SUPERFAMILY SSF52242 10 114 4.58E-9 T 31-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 DY252_21995 10e9b3f710d6b666fb889c7e40409db7 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.6E-16 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_21995 10e9b3f710d6b666fb889c7e40409db7 311 Gene3D G3DSA:1.10.10.10 4 91 3.5E-19 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_21995 10e9b3f710d6b666fb889c7e40409db7 311 SUPERFAMILY SSF46785 6 89 2.88E-16 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_21995 10e9b3f710d6b666fb889c7e40409db7 311 Gene3D G3DSA:3.40.190.10 93 291 1.6E-51 T 31-10-2018 DY252_21995 10e9b3f710d6b666fb889c7e40409db7 311 Pfam PF03466 LysR substrate binding domain 90 294 3.6E-39 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_21995 10e9b3f710d6b666fb889c7e40409db7 311 Gene3D G3DSA:3.40.190.10 166 268 1.6E-51 T 31-10-2018 DY252_21995 10e9b3f710d6b666fb889c7e40409db7 311 SUPERFAMILY SSF53850 92 299 2.53E-43 T 31-10-2018 DY252_08110 8db7c7039117faa299b7377946aabdd8 991 Pfam PF01571 Aminomethyltransferase folate-binding domain 604 869 6.0E-65 T 31-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain DY252_08110 8db7c7039117faa299b7377946aabdd8 991 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 170 302 4.4E-9 T 31-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DY252_08110 8db7c7039117faa299b7377946aabdd8 991 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 300 4.7E-9 T 31-10-2018 DY252_08110 8db7c7039117faa299b7377946aabdd8 991 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 190 4.7E-9 T 31-10-2018 DY252_08110 8db7c7039117faa299b7377946aabdd8 991 Gene3D G3DSA:3.50.50.60 294 410 6.4E-91 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_08110 8db7c7039117faa299b7377946aabdd8 991 Gene3D G3DSA:2.40.30.110 897 966 1.2E-6 T 31-10-2018 DY252_08110 8db7c7039117faa299b7377946aabdd8 991 TIGRFAM TIGR01372 soxA: sarcosine oxidase, alpha subunit family 4 990 0.0 T 31-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DY252_08110 8db7c7039117faa299b7377946aabdd8 991 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 878 963 1.9E-10 T 31-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DY252_08110 8db7c7039117faa299b7377946aabdd8 991 Gene3D G3DSA:3.30.1360.120 599 860 4.6E-83 T 31-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DY252_08110 8db7c7039117faa299b7377946aabdd8 991 SUPERFAMILY SSF103025 598 884 5.34E-87 T 31-10-2018 DY252_08110 8db7c7039117faa299b7377946aabdd8 991 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 19 100 1.4E-22 T 31-10-2018 DY252_08110 8db7c7039117faa299b7377946aabdd8 991 Gene3D G3DSA:3.30.70.1400 658 882 4.6E-83 T 31-10-2018 DY252_08110 8db7c7039117faa299b7377946aabdd8 991 Gene3D G3DSA:1.10.10.1100 495 572 6.4E-91 T 31-10-2018 DY252_08110 8db7c7039117faa299b7377946aabdd8 991 Gene3D G3DSA:3.10.20.440 12 104 3.5E-5 T 31-10-2018 DY252_08110 8db7c7039117faa299b7377946aabdd8 991 PIRSF PIRSF037980 1 991 0.0 T 31-10-2018 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DY252_08110 8db7c7039117faa299b7377946aabdd8 991 Gene3D G3DSA:3.50.50.60 170 577 6.4E-91 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_08110 8db7c7039117faa299b7377946aabdd8 991 SUPERFAMILY SSF101790 890 988 1.34E-12 T 31-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DY252_08110 8db7c7039117faa299b7377946aabdd8 991 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 283 291 2.1E-11 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_08110 8db7c7039117faa299b7377946aabdd8 991 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 454 473 2.1E-11 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_08110 8db7c7039117faa299b7377946aabdd8 991 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 170 192 2.1E-11 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_08110 8db7c7039117faa299b7377946aabdd8 991 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 322 346 2.1E-11 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_08110 8db7c7039117faa299b7377946aabdd8 991 SUPERFAMILY SSF51905 159 472 4.21E-27 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_03810 b6349572319614f3fd4f098b5bd689fd 228 Gene3D G3DSA:3.40.109.10 12 204 1.9E-49 T 31-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DY252_03810 b6349572319614f3fd4f098b5bd689fd 228 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 22 220 1.1E-80 T 31-10-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 DY252_03810 b6349572319614f3fd4f098b5bd689fd 228 SUPERFAMILY SSF55469 22 224 3.8E-48 T 31-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DY252_03810 b6349572319614f3fd4f098b5bd689fd 228 Pfam PF00881 Nitroreductase family 35 200 1.7E-23 T 31-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DY252_04355 109586c784e8c71d715c2d29cbed8da8 419 SUPERFAMILY SSF63411 2 211 6.86E-60 T 31-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DY252_04355 109586c784e8c71d715c2d29cbed8da8 419 Gene3D G3DSA:3.30.830.10 222 413 8.5E-60 T 31-10-2018 DY252_04355 109586c784e8c71d715c2d29cbed8da8 419 Pfam PF00675 Insulinase (Peptidase family M16) 14 159 1.3E-42 T 31-10-2018 IPR011765 Peptidase M16, N-terminal DY252_04355 109586c784e8c71d715c2d29cbed8da8 419 SUPERFAMILY SSF63411 219 411 1.91E-47 T 31-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DY252_04355 109586c784e8c71d715c2d29cbed8da8 419 Pfam PF05193 Peptidase M16 inactive domain 166 338 1.5E-42 T 31-10-2018 IPR007863 Peptidase M16, C-terminal DY252_04355 109586c784e8c71d715c2d29cbed8da8 419 Gene3D G3DSA:3.30.830.10 4 217 3.3E-71 T 31-10-2018 DY252_04355 109586c784e8c71d715c2d29cbed8da8 419 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 34 57 - T 31-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 DY252_19990 948f7422473685aa79dc4ed84a0e6531 296 SUPERFAMILY SSF88946 2 84 4.32E-13 T 31-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DY252_19990 948f7422473685aa79dc4ed84a0e6531 296 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 154 8.3E-13 T 31-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DY252_19990 948f7422473685aa79dc4ed84a0e6531 296 SUPERFAMILY SSF88659 95 153 1.14E-7 T 31-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DY252_19990 948f7422473685aa79dc4ed84a0e6531 296 SUPERFAMILY SSF54427 171 282 2.34E-11 T 31-10-2018 IPR032710 NTF2-like domain superfamily DY252_19990 948f7422473685aa79dc4ed84a0e6531 296 Pfam PF04542 Sigma-70 region 2 2 66 1.2E-11 T 31-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DY252_19990 948f7422473685aa79dc4ed84a0e6531 296 Pfam PF08281 Sigma-70, region 4 100 152 1.7E-8 T 31-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DY252_19990 948f7422473685aa79dc4ed84a0e6531 296 Gene3D G3DSA:3.10.450.50 169 276 3.9E-5 T 31-10-2018 DY252_19990 948f7422473685aa79dc4ed84a0e6531 296 Gene3D G3DSA:1.10.10.10 83 159 2.8E-7 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_19990 948f7422473685aa79dc4ed84a0e6531 296 Gene3D G3DSA:1.10.1740.10 1 78 3.4E-9 T 31-10-2018 DY252_04980 b7565a6dee08a96805192aeacad15266 445 Pfam PF04932 O-Antigen ligase 204 366 5.0E-12 T 31-10-2018 IPR007016 O-antigen ligase-related DY252_13830 ef5b3a10905929c6184be4ef749afe9f 115 Gene3D G3DSA:3.30.1330.40 1 115 6.1E-43 T 31-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DY252_13830 ef5b3a10905929c6184be4ef749afe9f 115 SUPERFAMILY SSF55298 2 114 4.56E-35 T 31-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DY252_13830 ef5b3a10905929c6184be4ef749afe9f 115 Pfam PF01042 Endoribonuclease L-PSP 10 113 9.9E-25 T 31-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DY252_14200 2b08eb3a0ad7eb3a0d81db7f0d517dad 303 Gene3D G3DSA:3.40.50.2300 18 275 1.1E-100 T 31-10-2018 DY252_14200 2b08eb3a0ad7eb3a0d81db7f0d517dad 303 Pfam PF13407 Periplasmic binding protein domain 18 276 6.9E-47 T 31-10-2018 IPR025997 Periplasmic binding protein DY252_14200 2b08eb3a0ad7eb3a0d81db7f0d517dad 303 Gene3D G3DSA:3.40.50.2300 118 258 1.1E-100 T 31-10-2018 DY252_14200 2b08eb3a0ad7eb3a0d81db7f0d517dad 303 SUPERFAMILY SSF53822 15 297 9.42E-72 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_15200 a6cbd8286beb71772bd9f71030e94e7c 338 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 330 8.0E-124 T 31-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 DY252_15200 a6cbd8286beb71772bd9f71030e94e7c 338 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 42 326 1.3E-101 T 31-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 DY252_15200 a6cbd8286beb71772bd9f71030e94e7c 338 SUPERFAMILY SSF53659 6 332 3.02E-109 T 31-10-2018 DY252_15200 a6cbd8286beb71772bd9f71030e94e7c 338 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 4 333 36.602 T 31-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 DY252_15200 a6cbd8286beb71772bd9f71030e94e7c 338 Gene3D G3DSA:3.40.718.10 1 333 3.6E-123 T 31-10-2018 DY252_15855 574ae5a08f5e775583800dceb2bd8009 260 SUPERFAMILY SSF51735 3 254 1.02E-55 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_15855 574ae5a08f5e775583800dceb2bd8009 260 Gene3D G3DSA:3.40.50.720 1 258 6.8E-60 T 31-10-2018 DY252_15855 574ae5a08f5e775583800dceb2bd8009 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.2E-19 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15855 574ae5a08f5e775583800dceb2bd8009 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 2.2E-19 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15855 574ae5a08f5e775583800dceb2bd8009 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.2E-19 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15855 574ae5a08f5e775583800dceb2bd8009 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.2E-19 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15855 574ae5a08f5e775583800dceb2bd8009 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.2E-19 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15855 574ae5a08f5e775583800dceb2bd8009 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.2E-19 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15855 574ae5a08f5e775583800dceb2bd8009 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 253 1.3E-33 T 31-10-2018 DY252_20805 2a7b51b28ea1ee212be0b0029c77c06c 74 Gene3D G3DSA:3.50.50.60 19 74 2.2E-6 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_20805 2a7b51b28ea1ee212be0b0029c77c06c 74 Pfam PF01494 FAD binding domain 25 48 3.9E-5 T 31-10-2018 IPR002938 FAD-binding domain GO:0071949 DY252_20805 2a7b51b28ea1ee212be0b0029c77c06c 74 SUPERFAMILY SSF51971 15 46 7.65E-6 T 31-10-2018 DY252_11050 afcd267378ec76e697e54e4a11c46867 362 Gene3D G3DSA:3.60.15.10 65 356 2.8E-79 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_11050 afcd267378ec76e697e54e4a11c46867 362 SUPERFAMILY SSF56281 85 307 3.28E-33 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_11050 afcd267378ec76e697e54e4a11c46867 362 Pfam PF12706 Beta-lactamase superfamily domain 101 299 3.7E-39 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_11050 afcd267378ec76e697e54e4a11c46867 362 PIRSF PIRSF038896 5 344 7.6E-98 T 31-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 DY252_05105 9767f0c5c000ae57958139218a998759 390 SUPERFAMILY SSF53901 269 390 1.44E-45 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_05105 9767f0c5c000ae57958139218a998759 390 Pfam PF02803 Thiolase, C-terminal domain 268 390 5.8E-54 T 31-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DY252_05105 9767f0c5c000ae57958139218a998759 390 PIRSF PIRSF000429 1 390 3.1E-128 T 31-10-2018 IPR002155 Thiolase GO:0016747 DY252_05105 9767f0c5c000ae57958139218a998759 390 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 31-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DY252_05105 9767f0c5c000ae57958139218a998759 390 Gene3D G3DSA:3.40.47.10 126 387 1.1E-153 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_05105 9767f0c5c000ae57958139218a998759 390 Pfam PF00108 Thiolase, N-terminal domain 4 260 3.0E-106 T 31-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DY252_05105 9767f0c5c000ae57958139218a998759 390 SUPERFAMILY SSF53901 3 267 2.33E-87 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_05105 9767f0c5c000ae57958139218a998759 390 Gene3D G3DSA:3.40.47.10 5 274 1.1E-153 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_05105 9767f0c5c000ae57958139218a998759 390 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 31-10-2018 IPR020610 Thiolase, active site GO:0016747 DY252_05105 9767f0c5c000ae57958139218a998759 390 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 31-10-2018 IPR020613 Thiolase, conserved site GO:0016747 DY252_05105 9767f0c5c000ae57958139218a998759 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 2.5E-145 T 31-10-2018 IPR002155 Thiolase GO:0016747 DY252_10050 1c522ae4a03560cc59cc6e30cb6a5e1f 724 SUPERFAMILY SSF58104 389 708 3.53E-63 T 31-10-2018 DY252_10050 1c522ae4a03560cc59cc6e30cb6a5e1f 724 Gene3D G3DSA:1.10.287.950 428 722 2.8E-56 T 31-10-2018 DY252_10050 1c522ae4a03560cc59cc6e30cb6a5e1f 724 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 527 682 2.3E-31 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_10050 1c522ae4a03560cc59cc6e30cb6a5e1f 724 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 105 1.9E-9 T 31-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DY252_10050 1c522ae4a03560cc59cc6e30cb6a5e1f 724 SMART SM00283 457 711 3.7E-42 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_10050 1c522ae4a03560cc59cc6e30cb6a5e1f 724 Gene3D G3DSA:1.20.1480.50 327 427 8.0E-11 T 31-10-2018 DY252_10050 1c522ae4a03560cc59cc6e30cb6a5e1f 724 Gene3D G3DSA:1.20.58.920 49 158 1.9E-6 T 31-10-2018 IPR038188 TorS, sensor domain superfamily DY252_10050 1c522ae4a03560cc59cc6e30cb6a5e1f 724 SMART SM00304 585 645 110.0 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_10050 1c522ae4a03560cc59cc6e30cb6a5e1f 724 SMART SM00304 368 420 1.0E-6 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_01640 0c2ef460d367509b6ad325d3bad316ac 343 Pfam PF06144 DNA polymerase III, delta subunit 23 189 2.3E-11 T 31-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 DY252_01640 0c2ef460d367509b6ad325d3bad316ac 343 SUPERFAMILY SSF52540 16 209 3.19E-13 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_01640 0c2ef460d367509b6ad325d3bad316ac 343 SUPERFAMILY SSF48019 215 324 8.5E-16 T 31-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DY252_01640 0c2ef460d367509b6ad325d3bad316ac 343 Gene3D G3DSA:1.20.272.10 216 341 1.8E-15 T 31-10-2018 DY252_01640 0c2ef460d367509b6ad325d3bad316ac 343 Gene3D G3DSA:1.10.8.60 144 213 1.8E-6 T 31-10-2018 DY252_01640 0c2ef460d367509b6ad325d3bad316ac 343 Gene3D G3DSA:3.40.50.300 16 134 9.6E-13 T 31-10-2018 DY252_01640 0c2ef460d367509b6ad325d3bad316ac 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 19 333 3.4E-49 T 31-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 DY252_02475 2793f0dc583351edded4fafee675df7b 404 Pfam PF00534 Glycosyl transferases group 1 204 372 2.6E-29 T 31-10-2018 IPR001296 Glycosyl transferase, family 1 DY252_02475 2793f0dc583351edded4fafee675df7b 404 Gene3D G3DSA:3.40.50.2000 63 392 2.4E-68 T 31-10-2018 DY252_02475 2793f0dc583351edded4fafee675df7b 404 Gene3D G3DSA:3.40.50.2000 184 379 2.4E-68 T 31-10-2018 DY252_02475 2793f0dc583351edded4fafee675df7b 404 SUPERFAMILY SSF53756 21 397 2.07E-84 T 31-10-2018 DY252_02475 2793f0dc583351edded4fafee675df7b 404 Pfam PF13439 Glycosyltransferase Family 4 31 187 1.1E-29 T 31-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DY252_01145 759d45ccf48597f220581439c96b62a6 82 Gene3D G3DSA:3.30.110.40 5 80 1.4E-17 T 31-10-2018 IPR036868 TusA-like domain superfamily DY252_01145 759d45ccf48597f220581439c96b62a6 82 Pfam PF01206 Sulfurtransferase TusA 8 80 2.6E-18 T 31-10-2018 IPR001455 TusA-like domain DY252_01145 759d45ccf48597f220581439c96b62a6 82 SUPERFAMILY SSF64307 2 81 9.94E-19 T 31-10-2018 IPR036868 TusA-like domain superfamily DY252_21100 5a3a1fcc8c0ffb161fbf1e8cbf7a92ab 82 SUPERFAMILY SSF47413 8 40 8.0E-6 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_21100 5a3a1fcc8c0ffb161fbf1e8cbf7a92ab 82 Pfam PF01381 Helix-turn-helix 8 37 9.9E-6 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_21100 5a3a1fcc8c0ffb161fbf1e8cbf7a92ab 82 Gene3D G3DSA:1.10.260.40 1 73 3.2E-15 T 31-10-2018 DY252_11855 73716277715165be04a01e44d80029b1 261 Gene3D G3DSA:3.40.50.300 17 261 1.4E-77 T 31-10-2018 DY252_11855 73716277715165be04a01e44d80029b1 261 PIRSF PIRSF039085 17 260 3.7E-107 T 31-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DY252_11855 73716277715165be04a01e44d80029b1 261 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_11855 73716277715165be04a01e44d80029b1 261 Pfam PF00005 ABC transporter 36 184 3.0E-36 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_11855 73716277715165be04a01e44d80029b1 261 SMART SM00382 45 232 3.5E-15 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_11855 73716277715165be04a01e44d80029b1 261 SUPERFAMILY SSF52540 20 254 2.6E-80 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_14865 2cc30c756ae123b6b11a8a259d83e027 807 Gene3D G3DSA:2.40.50.140 324 415 6.8E-13 T 31-10-2018 DY252_14865 2cc30c756ae123b6b11a8a259d83e027 807 Pfam PF00905 Penicillin binding protein transpeptidase domain 435 727 3.2E-35 T 31-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DY252_14865 2cc30c756ae123b6b11a8a259d83e027 807 Gene3D G3DSA:3.90.1310.20 52 295 2.1E-86 T 31-10-2018 DY252_14865 2cc30c756ae123b6b11a8a259d83e027 807 Pfam PF17092 Penicillin-binding protein OB-like domain 320 433 5.8E-23 T 31-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_14865 2cc30c756ae123b6b11a8a259d83e027 807 Gene3D G3DSA:3.40.710.10 416 776 1.7E-110 T 31-10-2018 DY252_14865 2cc30c756ae123b6b11a8a259d83e027 807 SUPERFAMILY SSF53955 42 252 3.66E-73 T 31-10-2018 IPR023346 Lysozyme-like domain superfamily DY252_14865 2cc30c756ae123b6b11a8a259d83e027 807 Gene3D G3DSA:3.40.710.10 296 310 2.1E-86 T 31-10-2018 DY252_14865 2cc30c756ae123b6b11a8a259d83e027 807 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 732 9.4E-182 T 31-10-2018 DY252_14865 2cc30c756ae123b6b11a8a259d83e027 807 Gene3D G3DSA:1.10.3810.10 65 256 2.1E-86 T 31-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_14865 2cc30c756ae123b6b11a8a259d83e027 807 SUPERFAMILY SSF56601 214 782 1.0E-131 T 31-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DY252_14865 2cc30c756ae123b6b11a8a259d83e027 807 Pfam PF00912 Transglycosylase 55 232 1.5E-61 T 31-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_08245 0cefe7549355d78b191189c33d6f86e2 446 SUPERFAMILY SSF103473 34 436 2.09E-38 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_08245 0cefe7549355d78b191189c33d6f86e2 446 Gene3D G3DSA:1.20.1250.20 33 440 2.2E-35 T 31-10-2018 DY252_08245 0cefe7549355d78b191189c33d6f86e2 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 315 332 - T 31-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DY252_08245 0cefe7549355d78b191189c33d6f86e2 446 Pfam PF07690 Major Facilitator Superfamily 70 404 1.9E-14 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_08480 8ab88b22b388a334c7fc799eb7dc1a96 341 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 337 1.0E-45 T 31-10-2018 IPR000160 GGDEF domain DY252_08480 8ab88b22b388a334c7fc799eb7dc1a96 341 Gene3D G3DSA:3.30.70.270 166 340 1.5E-53 T 31-10-2018 DY252_08480 8ab88b22b388a334c7fc799eb7dc1a96 341 SUPERFAMILY SSF55073 183 339 2.98E-45 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_08480 8ab88b22b388a334c7fc799eb7dc1a96 341 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 176 339 4.1E-50 T 31-10-2018 IPR000160 GGDEF domain DY252_08480 8ab88b22b388a334c7fc799eb7dc1a96 341 SMART SM00267 167 341 2.8E-54 T 31-10-2018 IPR000160 GGDEF domain DY252_17625 d0ea3cf212d5d712f0ddc80709027465 449 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 139 7.0E-29 T 31-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DY252_17625 d0ea3cf212d5d712f0ddc80709027465 449 SUPERFAMILY SSF64518 1 449 9.42E-67 T 31-10-2018 DY252_17625 d0ea3cf212d5d712f0ddc80709027465 449 PRINTS PR00207 Flagellin signature 111 134 1.8E-16 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_17625 d0ea3cf212d5d712f0ddc80709027465 449 PRINTS PR00207 Flagellin signature 37 54 1.8E-16 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_17625 d0ea3cf212d5d712f0ddc80709027465 449 PRINTS PR00207 Flagellin signature 76 95 1.8E-16 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_17625 d0ea3cf212d5d712f0ddc80709027465 449 Gene3D G3DSA:1.10.8.410 399 449 6.0E-21 T 31-10-2018 DY252_17625 d0ea3cf212d5d712f0ddc80709027465 449 Pfam PF00700 Bacterial flagellin C-terminal helical region 364 448 1.0E-22 T 31-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DY252_14820 d2ffa5ef6cf691902454a02df256c7a3 275 Pfam PF04305 Protein of unknown function (DUF455) 16 261 2.2E-96 T 31-10-2018 IPR007402 Protein of unknown function DUF455 DY252_14820 d2ffa5ef6cf691902454a02df256c7a3 275 SUPERFAMILY SSF47240 73 220 2.02E-16 T 31-10-2018 IPR009078 Ferritin-like superfamily DY252_14820 d2ffa5ef6cf691902454a02df256c7a3 275 PIRSF PIRSF012318 1 267 4.8E-96 T 31-10-2018 IPR011197 Uncharacterised conserved protein UCP012318 DY252_03225 afa0085d4bd814d96ef50ce2ebb0ed5d 317 Gene3D G3DSA:3.40.190.10 177 275 5.3E-42 T 31-10-2018 DY252_03225 afa0085d4bd814d96ef50ce2ebb0ed5d 317 Gene3D G3DSA:1.10.10.10 4 94 3.1E-28 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_03225 afa0085d4bd814d96ef50ce2ebb0ed5d 317 SUPERFAMILY SSF46785 9 92 2.97E-17 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_03225 afa0085d4bd814d96ef50ce2ebb0ed5d 317 Gene3D G3DSA:3.40.190.10 96 300 5.3E-42 T 31-10-2018 DY252_03225 afa0085d4bd814d96ef50ce2ebb0ed5d 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 6.0E-14 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_03225 afa0085d4bd814d96ef50ce2ebb0ed5d 317 Pfam PF03466 LysR substrate binding domain 100 286 9.0E-15 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_03225 afa0085d4bd814d96ef50ce2ebb0ed5d 317 SUPERFAMILY SSF53850 96 302 1.28E-31 T 31-10-2018 DY252_14775 1c691b5f5f8c0c5910eaacea30e0ecd2 160 Pfam PF02082 Transcriptional regulator 2 83 9.9E-27 T 31-10-2018 IPR000944 Transcription regulator Rrf2-type DY252_14775 1c691b5f5f8c0c5910eaacea30e0ecd2 160 SUPERFAMILY SSF46785 2 135 8.92E-36 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_14775 1c691b5f5f8c0c5910eaacea30e0ecd2 160 Gene3D G3DSA:1.10.10.10 1 142 9.4E-49 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_14775 1c691b5f5f8c0c5910eaacea30e0ecd2 160 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 31-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site DY252_14775 1c691b5f5f8c0c5910eaacea30e0ecd2 160 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 133 1.9E-41 T 31-10-2018 IPR000944 Transcription regulator Rrf2-type DY252_07585 d7aefbb9535a3f5e12ce582c556956b1 274 Pfam PF00005 ABC transporter 47 183 9.2E-27 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_07585 d7aefbb9535a3f5e12ce582c556956b1 274 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_07585 d7aefbb9535a3f5e12ce582c556956b1 274 Gene3D G3DSA:3.40.50.300 30 248 1.2E-58 T 31-10-2018 DY252_07585 d7aefbb9535a3f5e12ce582c556956b1 274 SMART SM00382 56 246 6.7E-14 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_07585 d7aefbb9535a3f5e12ce582c556956b1 274 SUPERFAMILY SSF52540 32 236 3.15E-60 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_04340 5d6512f4247665d73b05fcd9277ab663 495 PIRSF PIRSF006615 1 495 8.0E-175 T 31-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DY252_04340 5d6512f4247665d73b05fcd9277ab663 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 400 421 1.2E-46 T 31-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DY252_04340 5d6512f4247665d73b05fcd9277ab663 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 445 463 1.2E-46 T 31-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DY252_04340 5d6512f4247665d73b05fcd9277ab663 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 331 350 1.2E-46 T 31-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DY252_04340 5d6512f4247665d73b05fcd9277ab663 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 377 394 1.2E-46 T 31-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DY252_04340 5d6512f4247665d73b05fcd9277ab663 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 146 166 1.2E-46 T 31-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DY252_04340 5d6512f4247665d73b05fcd9277ab663 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 263 282 1.2E-46 T 31-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DY252_04340 5d6512f4247665d73b05fcd9277ab663 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 290 306 1.2E-46 T 31-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DY252_04340 5d6512f4247665d73b05fcd9277ab663 495 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 243 262 1.2E-46 T 31-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DY252_04340 5d6512f4247665d73b05fcd9277ab663 495 SUPERFAMILY SSF55486 2 493 4.03E-113 T 31-10-2018 DY252_04340 5d6512f4247665d73b05fcd9277ab663 495 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 12 493 4.9E-79 T 31-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DY252_04340 5d6512f4247665d73b05fcd9277ab663 495 Gene3D G3DSA:1.10.1370.30 1 495 4.8E-188 T 31-10-2018 DY252_10995 d41f6e31a81db924afcd9158982b9eb9 570 SMART SM00304 221 274 2.9E-5 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_10995 d41f6e31a81db924afcd9158982b9eb9 570 SMART SM00304 323 376 77.0 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_10995 d41f6e31a81db924afcd9158982b9eb9 570 Gene3D G3DSA:1.20.1480.50 181 279 9.6E-14 T 31-10-2018 DY252_10995 d41f6e31a81db924afcd9158982b9eb9 570 SUPERFAMILY SSF58104 249 563 1.83E-63 T 31-10-2018 DY252_10995 d41f6e31a81db924afcd9158982b9eb9 570 Gene3D G3DSA:1.10.287.950 280 569 5.8E-55 T 31-10-2018 DY252_10995 d41f6e31a81db924afcd9158982b9eb9 570 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 369 537 6.3E-35 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_10995 d41f6e31a81db924afcd9158982b9eb9 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 485 514 7.2E-11 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_10995 d41f6e31a81db924afcd9158982b9eb9 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 324 353 7.2E-11 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_10995 d41f6e31a81db924afcd9158982b9eb9 570 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 437 466 7.2E-11 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_10995 d41f6e31a81db924afcd9158982b9eb9 570 SMART SM00283 310 564 5.1E-48 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_16460 8f8e9a653d64b87a35233060727313d2 293 Gene3D G3DSA:3.40.50.1000 20 258 4.2E-45 T 31-10-2018 IPR023214 HAD superfamily DY252_16460 8f8e9a653d64b87a35233060727313d2 293 SUPERFAMILY SSF56784 18 266 7.68E-40 T 31-10-2018 IPR036412 HAD-like superfamily DY252_16460 8f8e9a653d64b87a35233060727313d2 293 Gene3D G3DSA:3.40.50.1000 87 204 4.2E-45 T 31-10-2018 IPR023214 HAD superfamily DY252_16460 8f8e9a653d64b87a35233060727313d2 293 Pfam PF13242 HAD-hyrolase-like 205 260 2.8E-11 T 31-10-2018 DY252_16460 8f8e9a653d64b87a35233060727313d2 293 TIGRFAM TIGR01459 HAD-SF-IIA-hyp4: HAD hydrolase, TIGR01459 family 13 252 2.4E-56 T 31-10-2018 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 DY252_16460 8f8e9a653d64b87a35233060727313d2 293 Pfam PF13344 Haloacid dehalogenase-like hydrolase 22 126 1.8E-11 T 31-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DY252_12130 9fbab33f5d3ec88c1d1cc5cf8891d13d 361 Gene3D G3DSA:3.20.20.300 15 355 2.8E-86 T 31-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 DY252_12130 9fbab33f5d3ec88c1d1cc5cf8891d13d 361 SUPERFAMILY SSF51445 17 310 2.21E-65 T 31-10-2018 IPR017853 Glycoside hydrolase superfamily DY252_12130 9fbab33f5d3ec88c1d1cc5cf8891d13d 361 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 41 307 1.3E-44 T 31-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DY252_09480 2a5b1b4149c97f16d78a0c0cd1a584ed 182 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 58 90 2.2E-14 T 31-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DY252_09480 2a5b1b4149c97f16d78a0c0cd1a584ed 182 SUPERFAMILY SSF69118 8 177 3.21E-51 T 31-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DY252_09480 2a5b1b4149c97f16d78a0c0cd1a584ed 182 Pfam PF02627 Carboxymuconolactone decarboxylase family 42 123 5.6E-15 T 31-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DY252_09480 2a5b1b4149c97f16d78a0c0cd1a584ed 182 Gene3D G3DSA:1.20.1290.10 14 179 6.1E-47 T 31-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DY252_02175 2db26c8970b84f306aee0ef8aa9fe8f0 278 SUPERFAMILY SSF161098 10 263 4.86E-44 T 31-10-2018 IPR035906 MetI-like superfamily DY252_02175 2db26c8970b84f306aee0ef8aa9fe8f0 278 Gene3D G3DSA:1.10.3720.10 4 272 9.2E-40 T 31-10-2018 IPR035906 MetI-like superfamily DY252_02175 2db26c8970b84f306aee0ef8aa9fe8f0 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 263 2.5E-15 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_09305 b57948385ee216a38b48ba12704827b2 410 Pfam PF05940 NnrS protein 19 399 2.5E-91 T 31-10-2018 IPR010266 NnrS DY252_01185 497b652772bbf849cdac3616b2b2a0d5 443 Gene3D G3DSA:3.20.20.80 1 443 3.4E-166 T 31-10-2018 DY252_01185 497b652772bbf849cdac3616b2b2a0d5 443 Pfam PF00232 Glycosyl hydrolase family 1 2 440 1.2E-153 T 31-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DY252_01185 497b652772bbf849cdac3616b2b2a0d5 443 SUPERFAMILY SSF51445 4 441 2.44E-155 T 31-10-2018 IPR017853 Glycoside hydrolase superfamily DY252_01185 497b652772bbf849cdac3616b2b2a0d5 443 TIGRFAM TIGR03356 BGL: beta-galactosidase 5 431 5.0E-176 T 31-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 DY252_01185 497b652772bbf849cdac3616b2b2a0d5 443 PRINTS PR00131 Glycosyl hydrolase family 1 signature 345 353 1.5E-18 T 31-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DY252_01185 497b652772bbf849cdac3616b2b2a0d5 443 PRINTS PR00131 Glycosyl hydrolase family 1 signature 366 377 1.5E-18 T 31-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DY252_01185 497b652772bbf849cdac3616b2b2a0d5 443 PRINTS PR00131 Glycosyl hydrolase family 1 signature 387 404 1.5E-18 T 31-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DY252_01185 497b652772bbf849cdac3616b2b2a0d5 443 PRINTS PR00131 Glycosyl hydrolase family 1 signature 282 296 1.5E-18 T 31-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DY252_01185 497b652772bbf849cdac3616b2b2a0d5 443 PRINTS PR00131 Glycosyl hydrolase family 1 signature 411 423 1.5E-18 T 31-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DY252_01185 497b652772bbf849cdac3616b2b2a0d5 443 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 31-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DY252_13820 cebcec8628138a70c70e0ab149194936 381 SUPERFAMILY SSF51905 4 358 1.1E-48 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_13820 cebcec8628138a70c70e0ab149194936 381 Pfam PF01266 FAD dependent oxidoreductase 5 349 2.0E-49 T 31-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DY252_13820 cebcec8628138a70c70e0ab149194936 381 Gene3D G3DSA:3.50.50.60 5 349 2.2E-112 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_13820 cebcec8628138a70c70e0ab149194936 381 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 55 65 4.7E-5 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_13820 cebcec8628138a70c70e0ab149194936 381 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 4.7E-5 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_13820 cebcec8628138a70c70e0ab149194936 381 Gene3D G3DSA:3.30.9.10 85 310 2.2E-112 T 31-10-2018 DY252_04725 b82ede6a9cee5897617beb4ca8e711c6 310 SUPERFAMILY SSF56317 10 256 7.46E-38 T 31-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DY252_04725 b82ede6a9cee5897617beb4ca8e711c6 310 Gene3D G3DSA:3.60.110.10 12 290 9.6E-33 T 31-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DY252_04725 b82ede6a9cee5897617beb4ca8e711c6 310 Pfam PF00795 Carbon-nitrogen hydrolase 26 232 2.4E-16 T 31-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DY252_13660 72739506a4077244bd53bb90b4571d6f 348 Pfam PF01593 Flavin containing amine oxidoreductase 162 342 1.1E-9 T 31-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 DY252_13660 72739506a4077244bd53bb90b4571d6f 348 Gene3D G3DSA:3.50.50.60 9 340 1.8E-100 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_13660 72739506a4077244bd53bb90b4571d6f 348 Gene3D G3DSA:3.90.660.10 47 305 1.8E-100 T 31-10-2018 DY252_13660 72739506a4077244bd53bb90b4571d6f 348 PRINTS PR00419 Adrenodoxin reductase family signature 31 44 2.3E-6 T 31-10-2018 DY252_13660 72739506a4077244bd53bb90b4571d6f 348 PRINTS PR00419 Adrenodoxin reductase family signature 8 30 2.3E-6 T 31-10-2018 DY252_13660 72739506a4077244bd53bb90b4571d6f 348 SUPERFAMILY SSF51905 4 346 3.89E-35 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_13660 72739506a4077244bd53bb90b4571d6f 348 Pfam PF13450 NAD(P)-binding Rossmann-like domain 11 75 3.7E-13 T 31-10-2018 DY252_03710 9952c97d1984a5e096301f8e60637cf9 473 Gene3D G3DSA:3.30.450.20 31 175 1.5E-23 T 31-10-2018 DY252_03710 9952c97d1984a5e096301f8e60637cf9 473 Pfam PF00989 PAS fold 60 172 9.4E-8 T 31-10-2018 IPR013767 PAS fold GO:0006355 DY252_03710 9952c97d1984a5e096301f8e60637cf9 473 SUPERFAMILY SSF55785 51 173 5.71E-16 T 31-10-2018 IPR035965 PAS domain superfamily DY252_03710 9952c97d1984a5e096301f8e60637cf9 473 SMART SM00091 59 125 1.2E-5 T 31-10-2018 IPR000014 PAS domain DY252_03710 9952c97d1984a5e096301f8e60637cf9 473 SUPERFAMILY SSF55874 296 456 7.6E-37 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_03710 9952c97d1984a5e096301f8e60637cf9 473 Gene3D G3DSA:3.30.565.10 303 466 4.3E-42 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_03710 9952c97d1984a5e096301f8e60637cf9 473 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 56 179 2.4E-16 T 31-10-2018 IPR000014 PAS domain DY252_03710 9952c97d1984a5e096301f8e60637cf9 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 457 2.0E-22 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_03710 9952c97d1984a5e096301f8e60637cf9 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 455 1.9E-17 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_03710 9952c97d1984a5e096301f8e60637cf9 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 1.9E-17 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_03710 9952c97d1984a5e096301f8e60637cf9 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 1.9E-17 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_03710 9952c97d1984a5e096301f8e60637cf9 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 1.9E-17 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_03710 9952c97d1984a5e096301f8e60637cf9 473 SMART SM00387 343 458 8.7E-25 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_04860 8f81795e1bb4eaa48f2d1e3cfdfa437e 653 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 311 7.0E-82 T 31-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 DY252_04860 8f81795e1bb4eaa48f2d1e3cfdfa437e 653 Gene3D G3DSA:3.30.565.10 1 203 2.8E-60 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_04860 8f81795e1bb4eaa48f2d1e3cfdfa437e 653 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 124 2.0E-11 T 31-10-2018 DY252_04860 8f81795e1bb4eaa48f2d1e3cfdfa437e 653 Gene3D G3DSA:3.30.1370.100 510 605 4.9E-60 T 31-10-2018 DY252_04860 8f81795e1bb4eaa48f2d1e3cfdfa437e 653 Pfam PF08676 MutL C terminal dimerisation domain 463 610 9.4E-50 T 31-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 DY252_04860 8f81795e1bb4eaa48f2d1e3cfdfa437e 653 Gene3D G3DSA:2.30.42.20 469 647 4.9E-60 T 31-10-2018 DY252_04860 8f81795e1bb4eaa48f2d1e3cfdfa437e 653 Gene3D G3DSA:3.30.230.10 218 330 5.3E-33 T 31-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DY252_04860 8f81795e1bb4eaa48f2d1e3cfdfa437e 653 SUPERFAMILY SSF118116 462 652 2.09E-59 T 31-10-2018 IPR037198 MutL, C-terminal domain superfamily DY252_04860 8f81795e1bb4eaa48f2d1e3cfdfa437e 653 SUPERFAMILY SSF54211 191 331 2.16E-33 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_04860 8f81795e1bb4eaa48f2d1e3cfdfa437e 653 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 92 98 - T 31-10-2018 IPR014762 DNA mismatch repair, conserved site DY252_04860 8f81795e1bb4eaa48f2d1e3cfdfa437e 653 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 650 27.66 T 31-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 DY252_04860 8f81795e1bb4eaa48f2d1e3cfdfa437e 653 SMART SM01340 213 331 2.2E-53 T 31-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 DY252_04860 8f81795e1bb4eaa48f2d1e3cfdfa437e 653 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 215 330 2.5E-35 T 31-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 DY252_04860 8f81795e1bb4eaa48f2d1e3cfdfa437e 653 SUPERFAMILY SSF55874 2 199 2.1E-48 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_04860 8f81795e1bb4eaa48f2d1e3cfdfa437e 653 SMART SM00853 467 610 6.7E-58 T 31-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 DY252_13050 6b7d1bf1138eb78102b1dff8e600ad9b 251 Pfam PF11967 Recombination protein O N terminal 1 70 1.9E-16 T 31-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal DY252_13050 6b7d1bf1138eb78102b1dff8e600ad9b 251 Gene3D G3DSA:1.20.1440.120 97 209 2.2E-5 T 31-10-2018 DY252_13050 6b7d1bf1138eb78102b1dff8e600ad9b 251 SUPERFAMILY SSF57863 89 188 2.59E-10 T 31-10-2018 IPR037278 ARFGAP/RecO-like zinc finger DY252_13050 6b7d1bf1138eb78102b1dff8e600ad9b 251 SUPERFAMILY SSF50249 2 68 4.97E-9 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_13050 6b7d1bf1138eb78102b1dff8e600ad9b 251 Gene3D G3DSA:2.40.50.140 1 70 3.4E-9 T 31-10-2018 DY252_13050 6b7d1bf1138eb78102b1dff8e600ad9b 251 Hamap MF_00201 DNA repair protein RecO [recO]. 1 242 16.162 T 31-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DY252_13050 6b7d1bf1138eb78102b1dff8e600ad9b 251 TIGRFAM TIGR00613 reco: DNA repair protein RecO 3 228 3.7E-26 T 31-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DY252_13050 6b7d1bf1138eb78102b1dff8e600ad9b 251 ProDom PD202328 DNA REPAIR RECOMBINATION RECO DAMAGE O O RECO-RELATED RECOMBINATIONAL RP549 151 244 1.0E-12 T 31-10-2018 DY252_13050 6b7d1bf1138eb78102b1dff8e600ad9b 251 Pfam PF02565 Recombination protein O C terminal 88 223 5.3E-24 T 31-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DY252_10435 a6ebd7d9b87d7e52a89263c98433ea8a 353 SUPERFAMILY SSF47413 15 73 3.66E-14 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_10435 a6ebd7d9b87d7e52a89263c98433ea8a 353 SUPERFAMILY SSF53822 72 342 8.08E-61 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_10435 a6ebd7d9b87d7e52a89263c98433ea8a 353 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 27 37 8.9E-5 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_10435 a6ebd7d9b87d7e52a89263c98433ea8a 353 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 8.9E-5 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_10435 a6ebd7d9b87d7e52a89263c98433ea8a 353 SMART SM00354 15 85 7.3E-23 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_10435 a6ebd7d9b87d7e52a89263c98433ea8a 353 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 74 342 2.8E-26 T 31-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain DY252_10435 a6ebd7d9b87d7e52a89263c98433ea8a 353 Pfam PF00356 Bacterial regulatory proteins, lacI family 17 62 5.3E-16 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_10435 a6ebd7d9b87d7e52a89263c98433ea8a 353 Gene3D G3DSA:1.10.260.40 14 73 3.5E-19 T 31-10-2018 DY252_10435 a6ebd7d9b87d7e52a89263c98433ea8a 353 Gene3D G3DSA:3.40.50.2300 174 309 8.8E-64 T 31-10-2018 DY252_10435 a6ebd7d9b87d7e52a89263c98433ea8a 353 Gene3D G3DSA:3.40.50.2300 76 324 8.8E-64 T 31-10-2018 DY252_21040 2837f27bf1e5f8e02b2e2844e3cea4bf 661 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 111 555 4.1E-104 T 31-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 DY252_21040 2837f27bf1e5f8e02b2e2844e3cea4bf 661 Gene3D G3DSA:3.40.50.300 322 554 4.0E-48 T 31-10-2018 DY252_21040 2837f27bf1e5f8e02b2e2844e3cea4bf 661 SUPERFAMILY SSF52540 108 552 1.43E-45 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_03345 1789193d3f931c043ae4f789835183d9 408 Gene3D G3DSA:3.90.1150.10 267 404 3.9E-57 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_03345 1789193d3f931c043ae4f789835183d9 408 SUPERFAMILY SSF53383 35 399 3.09E-128 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_03345 1789193d3f931c043ae4f789835183d9 408 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 16 398 3.7E-150 T 31-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DY252_03345 1789193d3f931c043ae4f789835183d9 408 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 12 399 1.8E-186 T 31-10-2018 IPR006237 L-methionine gamma-lyase GO:0018826 KEGG: 00270+4.4.1.11|KEGG: 00450+4.4.1.11|KEGG: 00920+4.4.1.2|MetaCyc: PWY-7793 DY252_03345 1789193d3f931c043ae4f789835183d9 408 PIRSF PIRSF001434 1 402 4.6E-151 T 31-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DY252_03345 1789193d3f931c043ae4f789835183d9 408 Gene3D G3DSA:3.40.640.10 12 266 5.8E-99 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_03345 1789193d3f931c043ae4f789835183d9 408 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 207 221 - T 31-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DY252_00545 af9174533daefbb105ad4d2aef5831d5 223 PIRSF PIRSF000709 3 209 2.7E-16 T 31-10-2018 DY252_00545 af9174533daefbb105ad4d2aef5831d5 223 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 11 20 - T 31-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 DY252_00545 af9174533daefbb105ad4d2aef5831d5 223 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 9 189 1.3E-39 T 31-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DY252_00545 af9174533daefbb105ad4d2aef5831d5 223 Gene3D G3DSA:3.40.50.1240 6 214 1.6E-42 T 31-10-2018 IPR029033 Histidine phosphatase superfamily DY252_00545 af9174533daefbb105ad4d2aef5831d5 223 SMART SM00855 8 169 4.1E-21 T 31-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DY252_00545 af9174533daefbb105ad4d2aef5831d5 223 SUPERFAMILY SSF53254 7 188 3.93E-42 T 31-10-2018 IPR029033 Histidine phosphatase superfamily DY252_13815 75bcb183f8f018d1358343f6cf635df9 347 PRINTS PR01270 Histone deacetylase superfamily signature 155 178 1.9E-14 T 31-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_13815 75bcb183f8f018d1358343f6cf635df9 347 PRINTS PR01270 Histone deacetylase superfamily signature 187 202 1.9E-14 T 31-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_13815 75bcb183f8f018d1358343f6cf635df9 347 PRINTS PR01270 Histone deacetylase superfamily signature 273 283 1.9E-14 T 31-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_13815 75bcb183f8f018d1358343f6cf635df9 347 Gene3D G3DSA:3.40.800.20 1 343 1.5E-117 T 31-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_13815 75bcb183f8f018d1358343f6cf635df9 347 SUPERFAMILY SSF52768 4 338 1.25E-89 T 31-10-2018 IPR023696 Ureohydrolase domain superfamily DY252_13815 75bcb183f8f018d1358343f6cf635df9 347 Pfam PF00850 Histone deacetylase domain 31 335 1.8E-70 T 31-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_08230 9040f7e1bc47ee86b11eb7347d52c621 563 SMART SM01049 36 130 6.9E-34 T 31-10-2018 IPR033480 Single Cache domain 2 DY252_08230 9040f7e1bc47ee86b11eb7347d52c621 563 Pfam PF17200 Single Cache domain 2 40 186 4.1E-37 T 31-10-2018 IPR033480 Single Cache domain 2 DY252_08230 9040f7e1bc47ee86b11eb7347d52c621 563 SUPERFAMILY SSF58104 242 556 3.79E-62 T 31-10-2018 DY252_08230 9040f7e1bc47ee86b11eb7347d52c621 563 Gene3D G3DSA:1.20.1480.50 184 274 3.1E-12 T 31-10-2018 DY252_08230 9040f7e1bc47ee86b11eb7347d52c621 563 Gene3D G3DSA:1.10.287.950 275 562 2.3E-54 T 31-10-2018 DY252_08230 9040f7e1bc47ee86b11eb7347d52c621 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 363 530 5.2E-31 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_08230 9040f7e1bc47ee86b11eb7347d52c621 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 478 507 2.0E-25 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_08230 9040f7e1bc47ee86b11eb7347d52c621 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 430 459 2.0E-25 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_08230 9040f7e1bc47ee86b11eb7347d52c621 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 324 353 2.0E-25 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_08230 9040f7e1bc47ee86b11eb7347d52c621 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 428 2.0E-25 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_08230 9040f7e1bc47ee86b11eb7347d52c621 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 17 42 2.0E-25 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_08230 9040f7e1bc47ee86b11eb7347d52c621 563 SMART SM00283 303 557 6.8E-46 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_08230 9040f7e1bc47ee86b11eb7347d52c621 563 Gene3D G3DSA:3.30.450.20 37 183 9.3E-52 T 31-10-2018 DY252_08230 9040f7e1bc47ee86b11eb7347d52c621 563 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 299 563 0.002 T 31-10-2018 DY252_09085 0b91fec45e5377c47bb70b5783061753 130 SUPERFAMILY SSF53137 15 130 1.11E-49 T 31-10-2018 DY252_09085 0b91fec45e5377c47bb70b5783061753 130 PIRSF PIRSF002131 1 130 7.8E-54 T 31-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DY252_09085 0b91fec45e5377c47bb70b5783061753 130 Pfam PF00411 Ribosomal protein S11 20 129 4.1E-51 T 31-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DY252_09085 0b91fec45e5377c47bb70b5783061753 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 33.866 T 31-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DY252_09085 0b91fec45e5377c47bb70b5783061753 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 5.9E-59 T 31-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_09085 0b91fec45e5377c47bb70b5783061753 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 31-10-2018 IPR018102 Ribosomal S11, conserved site DY252_09085 0b91fec45e5377c47bb70b5783061753 130 Gene3D G3DSA:3.30.420.80 2 130 4.9E-55 T 31-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 DY252_06550 cf959f29dfca432ba8e9be6bcf1f7862 290 SUPERFAMILY SSF103481 43 133 6.54E-14 T 31-10-2018 DY252_06550 cf959f29dfca432ba8e9be6bcf1f7862 290 SUPERFAMILY SSF103481 174 281 8.24E-13 T 31-10-2018 DY252_06550 cf959f29dfca432ba8e9be6bcf1f7862 290 Pfam PF00892 EamA-like transporter family 141 277 6.3E-19 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_06550 cf959f29dfca432ba8e9be6bcf1f7862 290 Pfam PF00892 EamA-like transporter family 4 130 1.2E-15 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_03740 2abd9a5803a45b8ec2d8fc7e3e14c6f6 409 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 409 142.879 T 31-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DY252_03740 2abd9a5803a45b8ec2d8fc7e3e14c6f6 409 Gene3D G3DSA:3.60.70.12 16 280 4.4E-80 T 31-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DY252_03740 2abd9a5803a45b8ec2d8fc7e3e14c6f6 409 Gene3D G3DSA:3.10.20.340 281 409 2.1E-45 T 31-10-2018 DY252_03740 2abd9a5803a45b8ec2d8fc7e3e14c6f6 409 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 27 407 1.0E-102 T 31-10-2018 DY252_03740 2abd9a5803a45b8ec2d8fc7e3e14c6f6 409 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 19 409 6.6E-111 T 31-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DY252_03740 2abd9a5803a45b8ec2d8fc7e3e14c6f6 409 Pfam PF01960 ArgJ family 26 409 2.6E-131 T 31-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DY252_03740 2abd9a5803a45b8ec2d8fc7e3e14c6f6 409 SUPERFAMILY SSF56266 20 406 3.4E-128 T 31-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DY252_14015 6309b9b152bc658bd64ffe6f6192f5a3 223 Gene3D G3DSA:3.40.50.150 23 215 1.1E-29 T 31-10-2018 DY252_14015 6309b9b152bc658bd64ffe6f6192f5a3 223 Pfam PF08241 Methyltransferase domain 74 166 3.6E-16 T 31-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DY252_14015 6309b9b152bc658bd64ffe6f6192f5a3 223 SUPERFAMILY SSF53335 30 183 1.25E-28 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_02310 88f3545df3e307e81d29fb9c4482f2ed 418 Gene3D G3DSA:1.20.1250.20 35 216 1.3E-13 T 31-10-2018 DY252_02310 88f3545df3e307e81d29fb9c4482f2ed 418 Gene3D G3DSA:1.20.1250.20 226 412 1.3E-18 T 31-10-2018 DY252_02310 88f3545df3e307e81d29fb9c4482f2ed 418 Pfam PF07690 Major Facilitator Superfamily 42 375 1.5E-21 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_02310 88f3545df3e307e81d29fb9c4482f2ed 418 SUPERFAMILY SSF103473 35 408 5.23E-46 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_11570 09b29ca25c5ffcd7ab668aa70b97f9f3 117 Pfam PF03960 ArsC family 5 113 1.9E-9 T 31-10-2018 IPR006660 Arsenate reductase-like DY252_11570 09b29ca25c5ffcd7ab668aa70b97f9f3 117 Gene3D G3DSA:3.40.30.10 1 115 1.9E-35 T 31-10-2018 DY252_11570 09b29ca25c5ffcd7ab668aa70b97f9f3 117 SUPERFAMILY SSF52833 1 114 7.24E-28 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_19820 0e53cd55402c0d4f4008020dd9fcf965 433 Gene3D G3DSA:2.30.42.10 97 184 1.2E-101 T 31-10-2018 DY252_19820 0e53cd55402c0d4f4008020dd9fcf965 433 Gene3D G3DSA:3.90.226.10 185 358 1.2E-101 T 31-10-2018 DY252_19820 0e53cd55402c0d4f4008020dd9fcf965 433 Pfam PF13180 PDZ domain 97 177 3.0E-14 T 31-10-2018 IPR001478 PDZ domain GO:0005515 DY252_19820 0e53cd55402c0d4f4008020dd9fcf965 433 Gene3D G3DSA:3.30.750.44 38 336 1.2E-101 T 31-10-2018 DY252_19820 0e53cd55402c0d4f4008020dd9fcf965 433 SMART SM00245 170 361 4.1E-80 T 31-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DY252_19820 0e53cd55402c0d4f4008020dd9fcf965 433 SUPERFAMILY SSF50156 85 180 1.12E-21 T 31-10-2018 IPR036034 PDZ superfamily GO:0005515 DY252_19820 0e53cd55402c0d4f4008020dd9fcf965 433 SMART SM00228 97 168 1.3E-16 T 31-10-2018 IPR001478 PDZ domain GO:0005515 DY252_19820 0e53cd55402c0d4f4008020dd9fcf965 433 SUPERFAMILY SSF52096 35 365 7.12E-87 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_19820 0e53cd55402c0d4f4008020dd9fcf965 433 Pfam PF03572 Peptidase family S41 194 360 6.0E-58 T 31-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DY252_19820 0e53cd55402c0d4f4008020dd9fcf965 433 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 49 369 2.2E-106 T 31-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 DY252_01620 52c8cec16eafd913595609890dea7458 633 SMART SM01228 546 617 2.8E-36 T 31-10-2018 DY252_01620 52c8cec16eafd913595609890dea7458 633 Gene3D G3DSA:1.10.150.570 569 621 1.0E-19 T 31-10-2018 DY252_01620 52c8cec16eafd913595609890dea7458 633 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 371 394 - T 31-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DY252_01620 52c8cec16eafd913595609890dea7458 633 Pfam PF13932 GidA associated domain 405 616 1.8E-71 T 31-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 DY252_01620 52c8cec16eafd913595609890dea7458 633 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 276 290 - T 31-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DY252_01620 52c8cec16eafd913595609890dea7458 633 Pfam PF01134 Glucose inhibited division protein A 11 400 3.9E-170 T 31-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 DY252_01620 52c8cec16eafd913595609890dea7458 633 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 8 624 42.001 T 31-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 DY252_01620 52c8cec16eafd913595609890dea7458 633 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 10 622 1.1E-257 T 31-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 DY252_01620 52c8cec16eafd913595609890dea7458 633 SUPERFAMILY SSF51905 10 264 1.11E-51 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_01620 52c8cec16eafd913595609890dea7458 633 Gene3D G3DSA:3.50.50.60 3 223 5.0E-96 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_01620 52c8cec16eafd913595609890dea7458 633 Gene3D G3DSA:3.50.50.60 299 462 3.8E-56 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_16185 6b53f8c3ef7e7afc7e1b529f2e062519 522 Gene3D G3DSA:3.90.76.10 43 198 1.2E-155 T 31-10-2018 DY252_16185 6b53f8c3ef7e7afc7e1b529f2e062519 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 432 2.1E-102 T 31-10-2018 IPR000914 Solute-binding protein family 5 domain DY252_16185 6b53f8c3ef7e7afc7e1b529f2e062519 522 Gene3D G3DSA:3.40.190.10 199 510 1.2E-155 T 31-10-2018 DY252_16185 6b53f8c3ef7e7afc7e1b529f2e062519 522 SUPERFAMILY SSF53850 30 519 7.06E-148 T 31-10-2018 DY252_16185 6b53f8c3ef7e7afc7e1b529f2e062519 522 PIRSF PIRSF002741 2 520 1.5E-130 T 31-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DY252_16185 6b53f8c3ef7e7afc7e1b529f2e062519 522 Gene3D G3DSA:3.10.105.10 278 498 1.2E-155 T 31-10-2018 DY252_06675 1d7fd4babb5bc54cb071ad1eb7824f39 155 PIRSF PIRSF027377 6 140 2.5E-51 T 31-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DY252_06675 1d7fd4babb5bc54cb071ad1eb7824f39 155 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 155 67.708 T 31-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DY252_06675 1d7fd4babb5bc54cb071ad1eb7824f39 155 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 25 133 8.8E-46 T 31-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DY252_06675 1d7fd4babb5bc54cb071ad1eb7824f39 155 Gene3D G3DSA:3.30.1130.10 20 140 6.3E-40 T 31-10-2018 DY252_06675 1d7fd4babb5bc54cb071ad1eb7824f39 155 Pfam PF14489 QueF-like protein 59 135 2.4E-32 T 31-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DY252_06675 1d7fd4babb5bc54cb071ad1eb7824f39 155 SUPERFAMILY SSF55620 25 141 1.26E-26 T 31-10-2018 DY252_12875 be0f0c8a6b85c46ee96c49f167c17dcf 195 Pfam PF00677 Lumazine binding domain 98 182 4.3E-24 T 31-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DY252_12875 be0f0c8a6b85c46ee96c49f167c17dcf 195 Pfam PF00677 Lumazine binding domain 3 84 1.4E-20 T 31-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DY252_12875 be0f0c8a6b85c46ee96c49f167c17dcf 195 Gene3D G3DSA:2.40.30.20 1 86 2.1E-24 T 31-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DY252_12875 be0f0c8a6b85c46ee96c49f167c17dcf 195 SUPERFAMILY SSF63380 1 91 7.99E-24 T 31-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DY252_12875 be0f0c8a6b85c46ee96c49f167c17dcf 195 SUPERFAMILY SSF63380 92 192 5.95E-33 T 31-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DY252_12875 be0f0c8a6b85c46ee96c49f167c17dcf 195 PIRSF PIRSF000498 1 195 3.5E-71 T 31-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DY252_12875 be0f0c8a6b85c46ee96c49f167c17dcf 195 Gene3D G3DSA:2.40.30.20 100 195 1.1E-36 T 31-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DY252_12875 be0f0c8a6b85c46ee96c49f167c17dcf 195 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 194 8.5E-61 T 31-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DY252_13195 56e2e935d010c1237133cd39fc668c0a 337 SUPERFAMILY SSF52518 16 336 3.63E-111 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_13195 56e2e935d010c1237133cd39fc668c0a 337 Pfam PF00676 Dehydrogenase E1 component 29 326 1.8E-107 T 31-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 DY252_13195 56e2e935d010c1237133cd39fc668c0a 337 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 21 334 1.9E-157 T 31-10-2018 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 DY252_13195 56e2e935d010c1237133cd39fc668c0a 337 Gene3D G3DSA:3.40.50.970 2 337 6.4E-139 T 31-10-2018 DY252_09430 5620252a73843d140fdbc6445a99bdb1 357 SUPERFAMILY SSF55326 7 170 3.29E-50 T 31-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DY252_09430 5620252a73843d140fdbc6445a99bdb1 357 Pfam PF00586 AIR synthase related protein, N-terminal domain 62 164 1.0E-14 T 31-10-2018 IPR016188 PurM-like, N-terminal domain DY252_09430 5620252a73843d140fdbc6445a99bdb1 357 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 336 1.5E-137 T 31-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DY252_09430 5620252a73843d140fdbc6445a99bdb1 357 Gene3D G3DSA:3.90.650.10 173 357 6.4E-72 T 31-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DY252_09430 5620252a73843d140fdbc6445a99bdb1 357 SUPERFAMILY SSF56042 172 341 1.64E-62 T 31-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DY252_09430 5620252a73843d140fdbc6445a99bdb1 357 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 343 5.6E-38 T 31-10-2018 IPR010918 PurM-like, C-terminal domain DY252_09430 5620252a73843d140fdbc6445a99bdb1 357 Gene3D G3DSA:3.30.1330.10 6 171 4.1E-68 T 31-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DY252_09430 5620252a73843d140fdbc6445a99bdb1 357 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 351 45.918 T 31-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DY252_16955 fe24dd9dda538fa820336f30ce2763b1 366 Gene3D G3DSA:3.40.50.2000 78 357 1.4E-45 T 31-10-2018 DY252_16955 fe24dd9dda538fa820336f30ce2763b1 366 Pfam PF00534 Glycosyl transferases group 1 179 340 7.8E-30 T 31-10-2018 IPR001296 Glycosyl transferase, family 1 DY252_16955 fe24dd9dda538fa820336f30ce2763b1 366 Gene3D G3DSA:3.40.50.2000 163 346 1.4E-45 T 31-10-2018 DY252_16955 fe24dd9dda538fa820336f30ce2763b1 366 SUPERFAMILY SSF53756 11 364 7.33E-57 T 31-10-2018 DY252_08715 2e75cadb16e93caf9dc1072fc4efcc66 376 Gene3D G3DSA:3.40.50.300 4 221 9.6E-64 T 31-10-2018 DY252_08715 2e75cadb16e93caf9dc1072fc4efcc66 376 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_08715 2e75cadb16e93caf9dc1072fc4efcc66 376 Gene3D G3DSA:2.40.50.940 222 353 1.3E-37 T 31-10-2018 DY252_08715 2e75cadb16e93caf9dc1072fc4efcc66 376 Gene3D G3DSA:2.40.50.140 288 344 1.3E-37 T 31-10-2018 DY252_08715 2e75cadb16e93caf9dc1072fc4efcc66 376 Pfam PF00005 ABC transporter 20 161 1.5E-29 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_08715 2e75cadb16e93caf9dc1072fc4efcc66 376 SUPERFAMILY SSF50331 236 360 1.93E-29 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_08715 2e75cadb16e93caf9dc1072fc4efcc66 376 SUPERFAMILY SSF52540 5 242 3.16E-85 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_08715 2e75cadb16e93caf9dc1072fc4efcc66 376 SMART SM00382 28 211 1.4E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_08715 2e75cadb16e93caf9dc1072fc4efcc66 376 Pfam PF08402 TOBE domain 281 352 3.8E-12 T 31-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DY252_10425 04684a63b1bf43c90485a4ef3549d857 219 SMART SM00448 1 112 1.7E-30 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_10425 04684a63b1bf43c90485a4ef3549d857 219 SUPERFAMILY SSF52172 2 125 9.39E-34 T 31-10-2018 IPR011006 CheY-like superfamily DY252_10425 04684a63b1bf43c90485a4ef3549d857 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 3.4E-20 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_10425 04684a63b1bf43c90485a4ef3549d857 219 Gene3D G3DSA:1.10.10.10 130 218 2.4E-26 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_10425 04684a63b1bf43c90485a4ef3549d857 219 SMART SM00862 146 217 7.8E-23 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_10425 04684a63b1bf43c90485a4ef3549d857 219 SUPERFAMILY SSF46894 127 217 5.1E-24 T 31-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DY252_10425 04684a63b1bf43c90485a4ef3549d857 219 Pfam PF00072 Response regulator receiver domain 3 112 3.9E-23 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_10425 04684a63b1bf43c90485a4ef3549d857 219 Gene3D G3DSA:3.40.50.2300 1 122 3.5E-35 T 31-10-2018 DY252_16225 6fe570bf6e09f0f12bf4bedf6f81f7cf 412 Pfam PF03600 Citrate transporter 23 339 3.9E-23 T 31-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 DY252_13865 4fc6b01a5f71c890d4595acb446cd004 351 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 43 271 1.3E-61 T 31-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DY252_13865 4fc6b01a5f71c890d4595acb446cd004 351 PIRSF PIRSF006470 1 340 3.5E-80 T 31-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DY252_13865 4fc6b01a5f71c890d4595acb446cd004 351 Gene3D G3DSA:3.40.190.170 29 350 1.0E-86 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_13865 4fc6b01a5f71c890d4595acb446cd004 351 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 44 322 1.7E-73 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_04030 bb76c3b1cf96320b75b8f1e3bb2ad559 297 SUPERFAMILY SSF48600 11 101 7.48E-14 T 31-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DY252_04030 bb76c3b1cf96320b75b8f1e3bb2ad559 297 Pfam PF01817 Chorismate mutase type II 17 99 4.2E-15 T 31-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DY252_04030 bb76c3b1cf96320b75b8f1e3bb2ad559 297 SMART SM00830 17 102 4.4E-17 T 31-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DY252_04030 bb76c3b1cf96320b75b8f1e3bb2ad559 297 Gene3D G3DSA:1.20.59.10 13 102 4.2E-18 T 31-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DY252_06030 016be0dd6e1e8ede2eae727af0107a36 505 SUPERFAMILY SSF52540 245 481 2.97E-42 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_06030 016be0dd6e1e8ede2eae727af0107a36 505 SUPERFAMILY SSF52540 9 234 4.83E-58 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_06030 016be0dd6e1e8ede2eae727af0107a36 505 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_06030 016be0dd6e1e8ede2eae727af0107a36 505 Pfam PF00005 ABC transporter 24 175 3.6E-31 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_06030 016be0dd6e1e8ede2eae727af0107a36 505 Gene3D G3DSA:3.40.50.300 263 494 1.0E-36 T 31-10-2018 DY252_06030 016be0dd6e1e8ede2eae727af0107a36 505 Pfam PF00005 ABC transporter 278 429 1.6E-16 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_06030 016be0dd6e1e8ede2eae727af0107a36 505 SMART SM00382 33 223 4.7E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_06030 016be0dd6e1e8ede2eae727af0107a36 505 SMART SM00382 284 478 1.6E-6 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_06030 016be0dd6e1e8ede2eae727af0107a36 505 Gene3D G3DSA:3.40.50.300 8 244 9.5E-58 T 31-10-2018 DY252_19750 65e168bafc20960537414d90edcbff81 428 Pfam PF00171 Aldehyde dehydrogenase family 22 292 7.5E-16 T 31-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DY252_19750 65e168bafc20960537414d90edcbff81 428 SUPERFAMILY SSF53720 16 427 4.45E-111 T 31-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DY252_19750 65e168bafc20960537414d90edcbff81 428 Gene3D G3DSA:3.40.605.10 28 422 5.2E-156 T 31-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_19750 65e168bafc20960537414d90edcbff81 428 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 23 417 1.1E-136 T 31-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DY252_19750 65e168bafc20960537414d90edcbff81 428 Gene3D G3DSA:3.40.309.10 237 385 5.2E-156 T 31-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DY252_19750 65e168bafc20960537414d90edcbff81 428 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 334 355 - T 31-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DY252_19750 65e168bafc20960537414d90edcbff81 428 PIRSF PIRSF000151 8 428 1.3E-169 T 31-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 DY252_19750 65e168bafc20960537414d90edcbff81 428 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 15 427 39.211 T 31-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DY252_21180 57177b416e3fbf55bfd6ff9559bada6b 833 Pfam PF00082 Subtilase family 276 618 4.0E-34 T 31-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DY252_21180 57177b416e3fbf55bfd6ff9559bada6b 833 Gene3D G3DSA:3.40.50.200 265 637 1.5E-26 T 31-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DY252_21180 57177b416e3fbf55bfd6ff9559bada6b 833 SUPERFAMILY SSF52743 276 631 1.57E-34 T 31-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DY252_21845 1f6391ff3c79f4f9fcdebc7bcda1ed81 126 Gene3D G3DSA:3.30.429.10 1 125 4.4E-29 T 31-10-2018 IPR014347 Tautomerase/MIF superfamily DY252_21845 1f6391ff3c79f4f9fcdebc7bcda1ed81 126 SUPERFAMILY SSF55331 2 119 1.83E-20 T 31-10-2018 IPR014347 Tautomerase/MIF superfamily DY252_21845 1f6391ff3c79f4f9fcdebc7bcda1ed81 126 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 104 6.0E-6 T 31-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 DY252_03685 8afcdea7d20afc3675c412190ca7e009 140 Pfam PF00072 Response regulator receiver domain 18 129 7.8E-22 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_03685 8afcdea7d20afc3675c412190ca7e009 140 SUPERFAMILY SSF52172 17 135 7.4E-27 T 31-10-2018 IPR011006 CheY-like superfamily DY252_03685 8afcdea7d20afc3675c412190ca7e009 140 SMART SM00448 15 129 1.2E-22 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_03685 8afcdea7d20afc3675c412190ca7e009 140 Gene3D G3DSA:3.40.50.2300 15 139 1.6E-27 T 31-10-2018 DY252_19940 1c6bdabc972a4510592623ed26fc36dc 285 Gene3D G3DSA:3.40.50.620 1 179 3.3E-70 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_19940 1c6bdabc972a4510592623ed26fc36dc 285 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 5 282 1.5E-93 T 31-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DY252_19940 1c6bdabc972a4510592623ed26fc36dc 285 Gene3D G3DSA:3.30.1300.10 180 285 2.0E-27 T 31-10-2018 DY252_19940 1c6bdabc972a4510592623ed26fc36dc 285 SUPERFAMILY SSF52374 3 282 4.22E-101 T 31-10-2018 DY252_19940 1c6bdabc972a4510592623ed26fc36dc 285 Pfam PF02569 Pantoate-beta-alanine ligase 5 280 2.2E-97 T 31-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DY252_19940 1c6bdabc972a4510592623ed26fc36dc 285 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 25 71 2.0E-8 T 31-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DY252_19940 1c6bdabc972a4510592623ed26fc36dc 285 Hamap MF_00158 Pantothenate synthetase [panC]. 4 282 39.575 T 31-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DY252_11175 a4a9c0e9bd54e4e9387b2266d4641cc9 176 SUPERFAMILY SSF55729 32 156 8.33E-19 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_11175 a4a9c0e9bd54e4e9387b2266d4641cc9 176 Gene3D G3DSA:3.40.630.30 30 161 1.2E-21 T 31-10-2018 DY252_11175 a4a9c0e9bd54e4e9387b2266d4641cc9 176 Pfam PF00583 Acetyltransferase (GNAT) family 69 150 7.2E-9 T 31-10-2018 IPR000182 GNAT domain DY252_03125 89bcba2d12c6f66229f5cd8b171f97f9 168 Gene3D G3DSA:2.60.120.480 1 165 9.1E-57 T 31-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 DY252_03125 89bcba2d12c6f66229f5cd8b171f97f9 168 Pfam PF04115 Ureidoglycolate lyase 2 155 1.7E-50 T 31-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 DY252_03125 89bcba2d12c6f66229f5cd8b171f97f9 168 SUPERFAMILY SSF51182 2 155 3.78E-52 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_03125 89bcba2d12c6f66229f5cd8b171f97f9 168 PIRSF PIRSF017306 1 158 2.2E-40 T 31-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 DY252_05790 a051a03179ca1bd7a6aeb176850918db 168 Gene3D G3DSA:1.20.120.330 60 166 1.0E-5 T 31-10-2018 DY252_20125 6728922ab4696ea735e02d1e0181b01f 302 SUPERFAMILY SSF46785 6 105 2.23E-15 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_20125 6728922ab4696ea735e02d1e0181b01f 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.7E-13 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_20125 6728922ab4696ea735e02d1e0181b01f 302 Pfam PF03466 LysR substrate binding domain 93 296 3.8E-24 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_20125 6728922ab4696ea735e02d1e0181b01f 302 Gene3D G3DSA:3.40.190.290 96 301 1.2E-15 T 31-10-2018 DY252_20125 6728922ab4696ea735e02d1e0181b01f 302 SUPERFAMILY SSF53850 93 299 2.06E-28 T 31-10-2018 DY252_20125 6728922ab4696ea735e02d1e0181b01f 302 Gene3D G3DSA:1.10.10.10 6 91 3.1E-17 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_02600 3151e9c63aaaad7a9544fdbb6d491e4d 396 Gene3D G3DSA:3.40.640.10 42 291 2.0E-118 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_02600 3151e9c63aaaad7a9544fdbb6d491e4d 396 Gene3D G3DSA:3.90.1150.10 14 382 2.0E-118 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_02600 3151e9c63aaaad7a9544fdbb6d491e4d 396 SUPERFAMILY SSF53383 1 395 1.71E-84 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_02600 3151e9c63aaaad7a9544fdbb6d491e4d 396 Pfam PF00155 Aminotransferase class I and II 33 390 2.7E-39 T 31-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DY252_08545 5fb36f222024c0d7ffca6a731bad7e43 517 Pfam PF00117 Glutamine amidotransferase class-I 7 189 7.7E-40 T 31-10-2018 IPR017926 Glutamine amidotransferase DY252_08545 5fb36f222024c0d7ffca6a731bad7e43 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 195 1.1E-69 T 31-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DY252_08545 5fb36f222024c0d7ffca6a731bad7e43 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 2.4E-8 T 31-10-2018 DY252_08545 5fb36f222024c0d7ffca6a731bad7e43 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 2.4E-8 T 31-10-2018 DY252_08545 5fb36f222024c0d7ffca6a731bad7e43 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 2.4E-8 T 31-10-2018 DY252_08545 5fb36f222024c0d7ffca6a731bad7e43 517 PRINTS PR00097 Anthranilate synthase component II signature 168 181 1.3E-6 T 31-10-2018 DY252_08545 5fb36f222024c0d7ffca6a731bad7e43 517 PRINTS PR00097 Anthranilate synthase component II signature 77 88 1.3E-6 T 31-10-2018 DY252_08545 5fb36f222024c0d7ffca6a731bad7e43 517 PRINTS PR00097 Anthranilate synthase component II signature 50 59 1.3E-6 T 31-10-2018 DY252_08545 5fb36f222024c0d7ffca6a731bad7e43 517 Gene3D G3DSA:3.30.300.10 397 517 2.8E-51 T 31-10-2018 DY252_08545 5fb36f222024c0d7ffca6a731bad7e43 517 SUPERFAMILY SSF52402 188 405 1.48E-61 T 31-10-2018 DY252_08545 5fb36f222024c0d7ffca6a731bad7e43 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 206 517 3.5E-145 T 31-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DY252_08545 5fb36f222024c0d7ffca6a731bad7e43 517 Pfam PF00958 GMP synthase C terminal domain 425 516 6.1E-43 T 31-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DY252_08545 5fb36f222024c0d7ffca6a731bad7e43 517 SUPERFAMILY SSF52317 2 228 3.06E-56 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_08545 5fb36f222024c0d7ffca6a731bad7e43 517 Pfam PF02540 NAD synthase 209 249 3.6E-6 T 31-10-2018 IPR022310 NAD/GMP synthase DY252_08545 5fb36f222024c0d7ffca6a731bad7e43 517 Gene3D G3DSA:3.40.50.620 201 396 1.4E-76 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_08545 5fb36f222024c0d7ffca6a731bad7e43 517 Gene3D G3DSA:3.40.50.880 1 200 2.5E-51 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_08545 5fb36f222024c0d7ffca6a731bad7e43 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 517 53.42 T 31-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 DY252_08545 5fb36f222024c0d7ffca6a731bad7e43 517 SUPERFAMILY SSF54810 396 517 7.06E-50 T 31-10-2018 DY252_15240 ca083be751741622433edc25109b6b91 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 6.2E-65 T 31-10-2018 DY252_15240 ca083be751741622433edc25109b6b91 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_15240 ca083be751741622433edc25109b6b91 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 189 3.2E-5 T 31-10-2018 DY252_15240 ca083be751741622433edc25109b6b91 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.6E-15 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15240 ca083be751741622433edc25109b6b91 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.6E-15 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15240 ca083be751741622433edc25109b6b91 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.6E-15 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15240 ca083be751741622433edc25109b6b91 246 SUPERFAMILY SSF51735 6 245 1.21E-84 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_15240 ca083be751741622433edc25109b6b91 246 Gene3D G3DSA:3.40.50.720 1 246 1.6E-86 T 31-10-2018 DY252_15240 ca083be751741622433edc25109b6b91 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 244 1.0E-95 T 31-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DY252_15240 ca083be751741622433edc25109b6b91 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.9E-47 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15240 ca083be751741622433edc25109b6b91 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.9E-47 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15240 ca083be751741622433edc25109b6b91 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.9E-47 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15240 ca083be751741622433edc25109b6b91 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.9E-47 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15240 ca083be751741622433edc25109b6b91 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.9E-47 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15240 ca083be751741622433edc25109b6b91 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.9E-47 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19365 a935ab2f1326472f341989388264c756 258 Pfam PF00005 ABC transporter 21 175 1.3E-30 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_19365 a935ab2f1326472f341989388264c756 258 SMART SM00382 29 224 2.0E-10 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_19365 a935ab2f1326472f341989388264c756 258 Gene3D G3DSA:3.40.50.300 1 255 8.5E-59 T 31-10-2018 DY252_19365 a935ab2f1326472f341989388264c756 258 SUPERFAMILY SSF52540 4 244 7.78E-58 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_13935 39198197cfdcb1c51e128109f0a211e1 401 Pfam PF00108 Thiolase, N-terminal domain 5 268 1.5E-79 T 31-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DY252_13935 39198197cfdcb1c51e128109f0a211e1 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 3.7E-139 T 31-10-2018 IPR002155 Thiolase GO:0016747 DY252_13935 39198197cfdcb1c51e128109f0a211e1 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 31-10-2018 IPR020613 Thiolase, conserved site GO:0016747 DY252_13935 39198197cfdcb1c51e128109f0a211e1 401 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 401 2.1E-211 T 31-10-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 DY252_13935 39198197cfdcb1c51e128109f0a211e1 401 Gene3D G3DSA:3.40.47.10 6 282 5.2E-155 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_13935 39198197cfdcb1c51e128109f0a211e1 401 PIRSF PIRSF000429 1 401 2.1E-132 T 31-10-2018 IPR002155 Thiolase GO:0016747 DY252_13935 39198197cfdcb1c51e128109f0a211e1 401 Gene3D G3DSA:3.40.47.10 141 397 5.2E-155 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_13935 39198197cfdcb1c51e128109f0a211e1 401 SUPERFAMILY SSF53901 277 399 1.24E-43 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_13935 39198197cfdcb1c51e128109f0a211e1 401 Pfam PF02803 Thiolase, C-terminal domain 277 399 4.3E-42 T 31-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DY252_13935 39198197cfdcb1c51e128109f0a211e1 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 31-10-2018 IPR020610 Thiolase, active site GO:0016747 DY252_13935 39198197cfdcb1c51e128109f0a211e1 401 SUPERFAMILY SSF53901 3 276 7.17E-85 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_13935 39198197cfdcb1c51e128109f0a211e1 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 31-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DY252_06575 b487ff075cf8768f911805d729012aec 169 Pfam PF13463 Winged helix DNA-binding domain 54 116 4.0E-16 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_06575 b487ff075cf8768f911805d729012aec 169 SUPERFAMILY SSF46785 22 159 3.35E-13 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_06575 b487ff075cf8768f911805d729012aec 169 Gene3D G3DSA:1.10.10.10 23 159 6.8E-8 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_06575 b487ff075cf8768f911805d729012aec 169 PIRSF PIRSF036158 1 169 1.3E-66 T 31-10-2018 IPR014601 Transcriptional regulator with MarR-type HTH domain DY252_13015 5cd991f8d3a8c2b52f790a1e7dba3e4e 284 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 203 220 - T 31-10-2018 IPR000540 Flagellar motor protein MotA, conserved site DY252_13015 5cd991f8d3a8c2b52f790a1e7dba3e4e 284 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 279 1.8E-107 T 31-10-2018 IPR022522 Flagellar motor stator, MotA DY252_13015 5cd991f8d3a8c2b52f790a1e7dba3e4e 284 Pfam PF01618 MotA/TolQ/ExbB proton channel family 131 230 8.7E-10 T 31-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DY252_17575 538515f95b7896e9d64b21b21d788b49 380 Pfam PF02119 Flagellar P-ring protein 34 379 4.0E-137 T 31-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DY252_17575 538515f95b7896e9d64b21b21d788b49 380 PRINTS PR01010 Flagellar P-ring protein signature 118 135 2.0E-77 T 31-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DY252_17575 538515f95b7896e9d64b21b21d788b49 380 PRINTS PR01010 Flagellar P-ring protein signature 201 219 2.0E-77 T 31-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DY252_17575 538515f95b7896e9d64b21b21d788b49 380 PRINTS PR01010 Flagellar P-ring protein signature 69 84 2.0E-77 T 31-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DY252_17575 538515f95b7896e9d64b21b21d788b49 380 PRINTS PR01010 Flagellar P-ring protein signature 175 193 2.0E-77 T 31-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DY252_17575 538515f95b7896e9d64b21b21d788b49 380 PRINTS PR01010 Flagellar P-ring protein signature 34 49 2.0E-77 T 31-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DY252_17575 538515f95b7896e9d64b21b21d788b49 380 PRINTS PR01010 Flagellar P-ring protein signature 49 64 2.0E-77 T 31-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DY252_17575 538515f95b7896e9d64b21b21d788b49 380 PRINTS PR01010 Flagellar P-ring protein signature 135 153 2.0E-77 T 31-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DY252_17575 538515f95b7896e9d64b21b21d788b49 380 PRINTS PR01010 Flagellar P-ring protein signature 96 115 2.0E-77 T 31-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DY252_17575 538515f95b7896e9d64b21b21d788b49 380 PRINTS PR01010 Flagellar P-ring protein signature 265 277 2.0E-77 T 31-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DY252_17575 538515f95b7896e9d64b21b21d788b49 380 Hamap MF_00416 Flagellar P-ring protein [flgI]. 14 380 36.033 T 31-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DY252_01600 88f64eccb97304d369ec69c5087415e5 679 SUPERFAMILY SSF52833 4 132 2.91E-28 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_01600 88f64eccb97304d369ec69c5087415e5 679 Gene3D G3DSA:3.40.30.10 4 174 1.2E-63 T 31-10-2018 DY252_01600 88f64eccb97304d369ec69c5087415e5 679 SUPERFAMILY SSF48208 194 532 4.02E-67 T 31-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DY252_01600 88f64eccb97304d369ec69c5087415e5 679 PIRSF PIRSF006402 1 678 2.1E-209 T 31-10-2018 IPR024705 Spermatogenesis-associated protein 20 DY252_01600 88f64eccb97304d369ec69c5087415e5 679 Gene3D G3DSA:1.50.10.20 402 567 9.2E-9 T 31-10-2018 DY252_01600 88f64eccb97304d369ec69c5087415e5 679 Pfam PF03190 Protein of unknown function, DUF255 5 166 1.1E-70 T 31-10-2018 IPR004879 Domain of unknown function DUF255 DY252_18420 628c029387325d1947799cb14627aae9 99 Pfam PF01809 Haemolytic domain 10 74 6.2E-28 T 31-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DY252_18420 628c029387325d1947799cb14627aae9 99 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 14 76 6.9E-24 T 31-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DY252_18420 628c029387325d1947799cb14627aae9 99 SMART SM01234 7 74 5.6E-38 T 31-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DY252_18420 628c029387325d1947799cb14627aae9 99 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 21 74 1.0E-17 T 31-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DY252_18420 628c029387325d1947799cb14627aae9 99 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 7 75 22.333 T 31-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DY252_08870 05ae73adacec14313fc6868cad995b1e 257 Gene3D G3DSA:3.40.50.1820 33 256 7.0E-35 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_08870 05ae73adacec14313fc6868cad995b1e 257 Pfam PF12697 Alpha/beta hydrolase family 38 249 1.3E-14 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_08870 05ae73adacec14313fc6868cad995b1e 257 SUPERFAMILY SSF53474 26 253 2.4E-24 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_18200 7508060a8ab2db6251639f03c1cece55 709 SUPERFAMILY SSF58104 388 702 2.35E-53 T 31-10-2018 DY252_18200 7508060a8ab2db6251639f03c1cece55 709 SMART SM00283 449 703 1.8E-35 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_18200 7508060a8ab2db6251639f03c1cece55 709 Pfam PF00672 HAMP domain 360 407 7.2E-7 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_18200 7508060a8ab2db6251639f03c1cece55 709 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 515 673 1.7E-29 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_18200 7508060a8ab2db6251639f03c1cece55 709 Gene3D G3DSA:1.20.1480.50 319 415 2.1E-16 T 31-10-2018 DY252_18200 7508060a8ab2db6251639f03c1cece55 709 Gene3D G3DSA:1.10.287.950 416 708 9.8E-46 T 31-10-2018 DY252_18200 7508060a8ab2db6251639f03c1cece55 709 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 624 653 5.7E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_18200 7508060a8ab2db6251639f03c1cece55 709 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 547 574 5.7E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_18200 7508060a8ab2db6251639f03c1cece55 709 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 576 605 5.7E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_18200 7508060a8ab2db6251639f03c1cece55 709 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 470 499 5.7E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_18200 7508060a8ab2db6251639f03c1cece55 709 SMART SM01358 77 330 2.9E-23 T 31-10-2018 IPR032255 Helical bimodular sensor domain DY252_18200 7508060a8ab2db6251639f03c1cece55 709 SMART SM00304 359 412 1.0E-6 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_07045 a5074bea4417db99ec3f349c63be7760 736 Pfam PF02769 AIR synthase related protein, C-terminal domain 206 358 3.9E-34 T 31-10-2018 IPR010918 PurM-like, C-terminal domain DY252_07045 a5074bea4417db99ec3f349c63be7760 736 Pfam PF02769 AIR synthase related protein, C-terminal domain 573 706 3.4E-18 T 31-10-2018 IPR010918 PurM-like, C-terminal domain DY252_07045 a5074bea4417db99ec3f349c63be7760 736 Gene3D G3DSA:3.30.1330.10 47 195 7.4E-133 T 31-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DY252_07045 a5074bea4417db99ec3f349c63be7760 736 Gene3D G3DSA:3.90.650.10 32 358 7.4E-133 T 31-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DY252_07045 a5074bea4417db99ec3f349c63be7760 736 SUPERFAMILY SSF56042 202 426 1.03E-57 T 31-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DY252_07045 a5074bea4417db99ec3f349c63be7760 736 Gene3D G3DSA:3.90.650.10 566 733 1.1E-37 T 31-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DY252_07045 a5074bea4417db99ec3f349c63be7760 736 SUPERFAMILY SSF55326 402 565 1.96E-54 T 31-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DY252_07045 a5074bea4417db99ec3f349c63be7760 736 SUPERFAMILY SSF56042 568 732 1.03E-34 T 31-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DY252_07045 a5074bea4417db99ec3f349c63be7760 736 PIRSF PIRSF001587 7 734 1.1E-296 T 31-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DY252_07045 a5074bea4417db99ec3f349c63be7760 736 Pfam PF00586 AIR synthase related protein, N-terminal domain 441 558 6.9E-23 T 31-10-2018 IPR016188 PurM-like, N-terminal domain DY252_07045 a5074bea4417db99ec3f349c63be7760 736 Pfam PF00586 AIR synthase related protein, N-terminal domain 90 191 8.2E-23 T 31-10-2018 IPR016188 PurM-like, N-terminal domain DY252_07045 a5074bea4417db99ec3f349c63be7760 736 Gene3D G3DSA:3.30.1330.10 388 560 1.7E-56 T 31-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DY252_07045 a5074bea4417db99ec3f349c63be7760 736 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 21 728 7.6E-294 T 31-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DY252_07045 a5074bea4417db99ec3f349c63be7760 736 SUPERFAMILY SSF55326 18 199 6.43E-52 T 31-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DY252_07045 a5074bea4417db99ec3f349c63be7760 736 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 736 328.926 T 31-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DY252_08420 abe1d1ae119393b846ecbc5bfd08e4e5 488 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 285 420 3.0E-40 T 31-10-2018 IPR000160 GGDEF domain DY252_08420 abe1d1ae119393b846ecbc5bfd08e4e5 488 SMART SM00267 278 472 3.1E-55 T 31-10-2018 IPR000160 GGDEF domain DY252_08420 abe1d1ae119393b846ecbc5bfd08e4e5 488 Gene3D G3DSA:3.30.70.270 274 474 6.5E-54 T 31-10-2018 DY252_08420 abe1d1ae119393b846ecbc5bfd08e4e5 488 Pfam PF00990 Diguanylate cyclase, GGDEF domain 289 419 1.6E-36 T 31-10-2018 IPR000160 GGDEF domain DY252_08420 abe1d1ae119393b846ecbc5bfd08e4e5 488 SUPERFAMILY SSF55073 294 471 3.14E-41 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 Pfam PF03924 CHASE domain 385 570 2.0E-33 T 31-10-2018 IPR006189 CHASE domain DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 Gene3D G3DSA:3.30.565.10 750 918 1.1E-53 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 SMART SM00388 682 751 4.7E-21 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 SUPERFAMILY SSF52172 946 1068 1.71E-29 T 31-10-2018 IPR011006 CheY-like superfamily DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 Pfam PF00512 His Kinase A (phospho-acceptor) domain 682 751 1.3E-17 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 Pfam PF00072 Response regulator receiver domain 949 1058 2.0E-18 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 798 912 2.2E-29 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 SMART SM01079 382 572 3.5E-33 T 31-10-2018 IPR006189 CHASE domain DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 SUPERFAMILY SSF47384 670 752 5.3E-20 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 SMART SM00387 798 914 1.9E-37 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 Gene3D G3DSA:3.30.450.350 386 595 1.5E-21 T 31-10-2018 DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 Pfam PF05231 MASE1 22 292 2.3E-28 T 31-10-2018 IPR007895 MASE1 DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 SMART SM00448 946 1061 3.8E-25 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 Gene3D G3DSA:1.10.287.130 647 749 4.0E-25 T 31-10-2018 DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 SUPERFAMILY SSF55874 741 912 1.19E-45 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 Gene3D G3DSA:3.40.50.12740 947 1080 9.5E-33 T 31-10-2018 DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 PRINTS PR00344 Bacterial sensor protein C-terminal signature 874 892 6.8E-14 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 PRINTS PR00344 Bacterial sensor protein C-terminal signature 898 911 6.8E-14 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 PRINTS PR00344 Bacterial sensor protein C-terminal signature 857 867 6.8E-14 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_16665 c97c6e342db59ce0fca73da986bef0ed 1081 PRINTS PR00344 Bacterial sensor protein C-terminal signature 839 853 6.8E-14 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_19620 a4be4e172e0bef3173544ded92620034 161 Pfam PF00430 ATP synthase B/B' CF(0) 13 142 3.5E-20 T 31-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DY252_19620 a4be4e172e0bef3173544ded92620034 161 Hamap MF_01398 ATP synthase subunit b [atpF]. 7 144 10.747 T 31-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DY252_22025 5b1dfcbc3ff0a6e884645e272492a3dc 284 SUPERFAMILY SSF52402 2 156 3.91E-19 T 31-10-2018 DY252_22025 5b1dfcbc3ff0a6e884645e272492a3dc 284 SUPERFAMILY SSF52402 163 284 2.23E-25 T 31-10-2018 DY252_22025 5b1dfcbc3ff0a6e884645e272492a3dc 284 Gene3D G3DSA:3.40.50.12370 3 284 2.5E-76 T 31-10-2018 DY252_22025 5b1dfcbc3ff0a6e884645e272492a3dc 284 PRINTS PR01438 Universal stress protein signature 262 284 3.1E-12 T 31-10-2018 IPR006015 Universal stress protein A DY252_22025 5b1dfcbc3ff0a6e884645e272492a3dc 284 PRINTS PR01438 Universal stress protein signature 164 182 3.1E-12 T 31-10-2018 IPR006015 Universal stress protein A DY252_22025 5b1dfcbc3ff0a6e884645e272492a3dc 284 PRINTS PR01438 Universal stress protein signature 244 256 3.1E-12 T 31-10-2018 IPR006015 Universal stress protein A DY252_22025 5b1dfcbc3ff0a6e884645e272492a3dc 284 Pfam PF00582 Universal stress protein family 3 156 5.3E-16 T 31-10-2018 IPR006016 UspA DY252_22025 5b1dfcbc3ff0a6e884645e272492a3dc 284 Pfam PF00582 Universal stress protein family 210 284 4.6E-12 T 31-10-2018 IPR006016 UspA DY252_15400 640224906157a0898e78adef5e1000e4 188 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 67 187 1.9E-5 T 31-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 DY252_15400 640224906157a0898e78adef5e1000e4 188 SUPERFAMILY SSF49503 57 187 1.15E-22 T 31-10-2018 IPR008972 Cupredoxin DY252_15400 640224906157a0898e78adef5e1000e4 188 Gene3D G3DSA:2.60.40.420 47 187 2.9E-30 T 31-10-2018 IPR008972 Cupredoxin DY252_10560 d63bdfbc3c0d18fabe48008b7b9e211d 150 Pfam PF02470 MlaD protein 36 113 8.4E-20 T 31-10-2018 IPR003399 Mce/MlaD DY252_10560 d63bdfbc3c0d18fabe48008b7b9e211d 150 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 144 2.7E-45 T 31-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 DY252_08260 581aafa0c1fae58da742c534438992ac 206 Pfam PF00510 Cytochrome c oxidase subunit III 23 203 3.0E-11 T 31-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08260 581aafa0c1fae58da742c534438992ac 206 Gene3D G3DSA:1.20.120.80 20 205 4.8E-53 T 31-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08260 581aafa0c1fae58da742c534438992ac 206 SUPERFAMILY SSF81452 16 203 5.89E-55 T 31-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08260 581aafa0c1fae58da742c534438992ac 206 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 26 205 6.4E-77 T 31-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 DY252_06840 898ff5858c432a94771493d785726d43 590 SUPERFAMILY SSF52402 231 523 7.39E-62 T 31-10-2018 DY252_06840 898ff5858c432a94771493d785726d43 590 Pfam PF00733 Asparagine synthase 237 567 1.4E-69 T 31-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 DY252_06840 898ff5858c432a94771493d785726d43 590 Pfam PF13537 Glutamine amidotransferase domain 48 162 7.3E-33 T 31-10-2018 IPR017932 Glutamine amidotransferase type 2 domain DY252_06840 898ff5858c432a94771493d785726d43 590 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 5 506 3.3E-114 T 31-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DY252_06840 898ff5858c432a94771493d785726d43 590 SUPERFAMILY SSF56235 23 216 8.06E-43 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_06840 898ff5858c432a94771493d785726d43 590 PIRSF PIRSF001589 1 581 3.3E-150 T 31-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DY252_06840 898ff5858c432a94771493d785726d43 590 Gene3D G3DSA:3.60.20.10 7 186 4.3E-47 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 Pfam PF01568 Molydopterin dinucleotide binding domain 820 924 2.7E-28 T 31-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 Gene3D G3DSA:3.10.20.740 19 140 7.0E-40 T 31-10-2018 DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 SMART SM00929 101 141 6.5E-20 T 31-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 Gene3D G3DSA:2.20.25.90 249 302 1.3E-15 T 31-10-2018 DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 Gene3D G3DSA:3.30.70.20 157 239 6.1E-24 T 31-10-2018 DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 101 140 4.8E-17 T 31-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 Gene3D G3DSA:2.40.40.20 817 930 4.2E-34 T 31-10-2018 DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 249 302 1.7E-15 T 31-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 SMART SM00926 248 302 2.1E-15 T 31-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 18 94 7.0E-25 T 31-10-2018 DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 253 928 8.1E-288 T 31-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 PIRSF PIRSF036643 15 959 0.0 T 31-10-2018 DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 Pfam PF12838 4Fe-4S dicluster domain 177 234 2.2E-6 T 31-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 SUPERFAMILY SSF54292 19 92 2.57E-19 T 31-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 SUPERFAMILY SSF50692 787 928 2.71E-41 T 31-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 Gene3D G3DSA:3.40.228.10 385 592 2.4E-168 T 31-10-2018 DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 SUPERFAMILY SSF53706 249 779 8.11E-189 T 31-10-2018 DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 221 232 - T 31-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 858 885 - T 31-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 Pfam PF00384 Molybdopterin oxidoreductase 305 736 1.2E-72 T 31-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 Gene3D G3DSA:3.40.50.740 310 779 2.4E-168 T 31-10-2018 DY252_07955 6a54f2e07dfd7d9e394ed5ce8c55bf4b 959 SUPERFAMILY SSF54862 93 243 2.3E-38 T 31-10-2018 DY252_13360 ee116a6dba872d40d177ba9e6e163dd9 187 Pfam PF01765 Ribosome recycling factor 22 185 1.5E-63 T 31-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 DY252_13360 ee116a6dba872d40d177ba9e6e163dd9 187 TIGRFAM TIGR00496 frr: ribosome recycling factor 14 187 5.1E-64 T 31-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 DY252_13360 ee116a6dba872d40d177ba9e6e163dd9 187 Gene3D G3DSA:1.10.132.20 14 184 7.0E-69 T 31-10-2018 DY252_13360 ee116a6dba872d40d177ba9e6e163dd9 187 Hamap MF_00040 Ribosome-recycling factor [frr]. 5 187 25.921 T 31-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 DY252_13360 ee116a6dba872d40d177ba9e6e163dd9 187 SUPERFAMILY SSF55194 7 187 4.84E-71 T 31-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 DY252_13360 ee116a6dba872d40d177ba9e6e163dd9 187 Gene3D G3DSA:3.30.1360.40 33 107 7.0E-69 T 31-10-2018 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 124 328 1.7E-70 T 31-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 Pfam PF00682 HMGL-like 541 813 8.2E-28 T 31-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 SMART SM00878 352 459 2.1E-51 T 31-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 Pfam PF02436 Conserved carboxylase domain 836 1036 1.7E-76 T 31-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 SUPERFAMILY SSF52440 6 121 1.29E-44 T 31-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 Gene3D G3DSA:3.30.470.130 2 467 1.0E-199 T 31-10-2018 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 161 175 - T 31-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 Pfam PF02785 Biotin carboxylase C-terminal domain 352 460 3.1E-34 T 31-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 11 1154 0.0 T 31-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 PIRSF PIRSF001594 4 1156 0.0 T 31-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 SUPERFAMILY SSF56059 91 336 5.13E-65 T 31-10-2018 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 Gene3D G3DSA:2.40.50.100 1078 1155 4.5E-25 T 31-10-2018 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 SUPERFAMILY SSF51246 348 465 3.4E-37 T 31-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 SUPERFAMILY SSF89000 841 1018 5.89E-57 T 31-10-2018 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1111 1128 - T 31-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 SUPERFAMILY SSF51569 533 844 4.03E-85 T 31-10-2018 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 SUPERFAMILY SSF51230 1078 1154 1.83E-21 T 31-10-2018 IPR011053 Single hybrid motif DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 295 302 - T 31-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 Gene3D G3DSA:3.10.600.10 471 1069 6.5E-277 T 31-10-2018 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 Pfam PF00364 Biotin-requiring enzyme 1089 1154 4.1E-18 T 31-10-2018 IPR000089 Biotin/lipoyl attachment DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 Pfam PF00289 Biotin carboxylase, N-terminal domain 9 118 1.5E-41 T 31-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DY252_03915 ba3d30d56a953554ec4e24c09475a142 1156 Gene3D G3DSA:3.20.20.70 489 1017 6.5E-277 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_21310 7e3c6ac6d5d7592bbd9ddca3abc980f7 566 Pfam PF03432 Relaxase/Mobilisation nuclease domain 36 275 4.0E-33 T 31-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 DY252_02790 361e2646e96299b89b26417284a5fb9f 443 Gene3D G3DSA:3.30.160.390 7 118 4.5E-17 T 31-10-2018 IPR038488 Integrase, DNA-binding domain superfamily DY252_02790 361e2646e96299b89b26417284a5fb9f 443 SUPERFAMILY SSF56349 115 414 9.42E-46 T 31-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DY252_02790 361e2646e96299b89b26417284a5fb9f 443 Pfam PF13356 Arm DNA-binding domain 9 102 1.2E-14 T 31-10-2018 IPR025166 Integrase, DNA-binding domain DY252_02790 361e2646e96299b89b26417284a5fb9f 443 Gene3D G3DSA:1.10.443.10 236 418 4.3E-13 T 31-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DY252_02790 361e2646e96299b89b26417284a5fb9f 443 Gene3D G3DSA:1.10.150.130 119 200 9.2E-30 T 31-10-2018 IPR010998 Integrase/recombinase, N-terminal DY252_02790 361e2646e96299b89b26417284a5fb9f 443 Pfam PF00589 Phage integrase family 249 405 2.0E-11 T 31-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DY252_21300 0457b23fbc65001540b2acb97148e2a9 503 Gene3D G3DSA:3.40.50.300 276 494 1.0E-41 T 31-10-2018 DY252_21300 0457b23fbc65001540b2acb97148e2a9 503 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 84 489 9.5E-84 T 31-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 DY252_21300 0457b23fbc65001540b2acb97148e2a9 503 SUPERFAMILY SSF52540 57 492 3.66E-37 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07000 d3bcfe41840eb1af044c2aa6854a0067 587 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 397 545 3.8E-51 T 31-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DY252_07000 d3bcfe41840eb1af044c2aa6854a0067 587 SUPERFAMILY SSF52518 374 569 1.46E-68 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_07000 d3bcfe41840eb1af044c2aa6854a0067 587 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 332 1.5E-41 T 31-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DY252_07000 d3bcfe41840eb1af044c2aa6854a0067 587 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 434 453 - T 31-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DY252_07000 d3bcfe41840eb1af044c2aa6854a0067 587 Gene3D G3DSA:3.40.50.1220 190 363 4.9E-59 T 31-10-2018 DY252_07000 d3bcfe41840eb1af044c2aa6854a0067 587 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 6 567 1.9E-242 T 31-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DY252_07000 d3bcfe41840eb1af044c2aa6854a0067 587 Gene3D G3DSA:3.40.50.970 2 183 1.1E-70 T 31-10-2018 DY252_07000 d3bcfe41840eb1af044c2aa6854a0067 587 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 169 9.3E-59 T 31-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DY252_07000 d3bcfe41840eb1af044c2aa6854a0067 587 SUPERFAMILY SSF52518 3 184 5.55E-64 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_07000 d3bcfe41840eb1af044c2aa6854a0067 587 Gene3D G3DSA:3.40.50.970 365 580 1.3E-69 T 31-10-2018 DY252_07000 d3bcfe41840eb1af044c2aa6854a0067 587 SUPERFAMILY SSF52467 189 364 1.21E-62 T 31-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DY252_14045 2f12d641147b498753067bfafead3acd 398 Gene3D G3DSA:3.90.180.10 13 381 3.7E-137 T 31-10-2018 DY252_14045 2f12d641147b498753067bfafead3acd 398 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 36 145 5.7E-25 T 31-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DY252_14045 2f12d641147b498753067bfafead3acd 398 TIGRFAM TIGR02819 fdhA_non_GSH: formaldehyde dehydrogenase, glutathione-independent 5 395 2.9E-227 T 31-10-2018 IPR014184 Formaldehyde dehydrogenase, glutathione-independent GO:0016491|GO:0055114 DY252_14045 2f12d641147b498753067bfafead3acd 398 Pfam PF00107 Zinc-binding dehydrogenase 198 267 1.1E-9 T 31-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DY252_14045 2f12d641147b498753067bfafead3acd 398 SUPERFAMILY SSF50129 6 188 5.37E-59 T 31-10-2018 IPR011032 GroES-like superfamily DY252_14045 2f12d641147b498753067bfafead3acd 398 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 68 82 - T 31-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DY252_14045 2f12d641147b498753067bfafead3acd 398 Gene3D G3DSA:3.40.50.720 179 344 3.7E-137 T 31-10-2018 DY252_14045 2f12d641147b498753067bfafead3acd 398 SUPERFAMILY SSF51735 163 354 2.13E-67 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_20280 07f61cc8909e90bf149184911e0ff0e2 163 SUPERFAMILY SSF53335 18 102 3.34E-8 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_20280 07f61cc8909e90bf149184911e0ff0e2 163 Pfam PF12692 S-adenosyl-L-methionine methyltransferase 1 160 7.2E-54 T 31-10-2018 IPR025690 Methyltransferase, putative DY252_20280 07f61cc8909e90bf149184911e0ff0e2 163 Gene3D G3DSA:3.40.50.150 1 162 1.3E-70 T 31-10-2018 DY252_21825 3dd09102e5674969cfb2d7e15914371c 849 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 744 839 2.7E-6 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_21825 3dd09102e5674969cfb2d7e15914371c 849 Gene3D G3DSA:1.10.287.130 623 699 6.7E-11 T 31-10-2018 DY252_21825 3dd09102e5674969cfb2d7e15914371c 849 SMART SM00387 743 844 8.6E-6 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_21825 3dd09102e5674969cfb2d7e15914371c 849 Pfam PF00512 His Kinase A (phospho-acceptor) domain 633 697 1.5E-8 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_21825 3dd09102e5674969cfb2d7e15914371c 849 SUPERFAMILY SSF55785 483 600 5.14E-6 T 31-10-2018 IPR035965 PAS domain superfamily DY252_21825 3dd09102e5674969cfb2d7e15914371c 849 Gene3D G3DSA:3.30.450.20 499 622 1.5E-6 T 31-10-2018 DY252_21825 3dd09102e5674969cfb2d7e15914371c 849 Gene3D G3DSA:3.30.565.10 701 845 4.3E-14 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_21825 3dd09102e5674969cfb2d7e15914371c 849 SMART SM00388 633 697 5.4E-7 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_21825 3dd09102e5674969cfb2d7e15914371c 849 SMART SM00091 246 315 4.8 T 31-10-2018 IPR000014 PAS domain DY252_21825 3dd09102e5674969cfb2d7e15914371c 849 SMART SM00091 499 566 45.0 T 31-10-2018 IPR000014 PAS domain DY252_21825 3dd09102e5674969cfb2d7e15914371c 849 SMART SM00091 117 182 11.0 T 31-10-2018 IPR000014 PAS domain DY252_21825 3dd09102e5674969cfb2d7e15914371c 849 SMART SM00091 370 441 100.0 T 31-10-2018 IPR000014 PAS domain DY252_21825 3dd09102e5674969cfb2d7e15914371c 849 SUPERFAMILY SSF47384 617 698 8.24E-11 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_21825 3dd09102e5674969cfb2d7e15914371c 849 SUPERFAMILY SSF55874 686 831 1.2E-15 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_21825 3dd09102e5674969cfb2d7e15914371c 849 Pfam PF12860 PAS fold 376 487 1.0E-8 T 31-10-2018 DY252_21825 3dd09102e5674969cfb2d7e15914371c 849 Pfam PF12860 PAS fold 505 617 2.7E-11 T 31-10-2018 DY252_05030 8e099b126dedbe9851995848796fd842 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.75 T 31-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_05030 8e099b126dedbe9851995848796fd842 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 7.1E-35 T 31-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_05030 8e099b126dedbe9851995848796fd842 103 SUPERFAMILY SSF141091 1 101 1.7E-39 T 31-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_05030 8e099b126dedbe9851995848796fd842 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 4.7E-43 T 31-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_14210 abb5e0a60786d1839aa122afc01db736 529 Gene3D G3DSA:1.10.246.130 238 348 4.4E-17 T 31-10-2018 DY252_14210 abb5e0a60786d1839aa122afc01db736 529 Gene3D G3DSA:3.60.20.40 349 528 1.1E-61 T 31-10-2018 DY252_14210 abb5e0a60786d1839aa122afc01db736 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 125 144 1.0E-16 T 31-10-2018 DY252_14210 abb5e0a60786d1839aa122afc01db736 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 251 270 1.0E-16 T 31-10-2018 DY252_14210 abb5e0a60786d1839aa122afc01db736 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 344 362 1.0E-16 T 31-10-2018 DY252_14210 abb5e0a60786d1839aa122afc01db736 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 368 386 1.0E-16 T 31-10-2018 DY252_14210 abb5e0a60786d1839aa122afc01db736 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 222 238 1.0E-16 T 31-10-2018 DY252_14210 abb5e0a60786d1839aa122afc01db736 529 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 32 57 1.0E-16 T 31-10-2018 DY252_14210 abb5e0a60786d1839aa122afc01db736 529 Pfam PF01019 Gamma-glutamyltranspeptidase 24 524 1.2E-114 T 31-10-2018 DY252_14210 abb5e0a60786d1839aa122afc01db736 529 SUPERFAMILY SSF56235 6 527 7.72E-138 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_08240 ff9a2e0cd8aeaac8faac8ee76c059279 230 Pfam PF02798 Glutathione S-transferase, N-terminal domain 5 80 3.4E-13 T 31-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DY252_08240 ff9a2e0cd8aeaac8faac8ee76c059279 230 SUPERFAMILY SSF47616 77 204 2.87E-31 T 31-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DY252_08240 ff9a2e0cd8aeaac8faac8ee76c059279 230 Gene3D G3DSA:1.20.1050.10 89 227 5.1E-38 T 31-10-2018 DY252_08240 ff9a2e0cd8aeaac8faac8ee76c059279 230 SUPERFAMILY SSF52833 1 83 1.88E-22 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_08240 ff9a2e0cd8aeaac8faac8ee76c059279 230 Gene3D G3DSA:3.40.30.10 1 88 8.0E-32 T 31-10-2018 DY252_08240 ff9a2e0cd8aeaac8faac8ee76c059279 230 Pfam PF00043 Glutathione S-transferase, C-terminal domain 128 198 4.3E-12 T 31-10-2018 IPR004046 Glutathione S-transferase, C-terminal DY252_02605 551eaaaa12044f686ea2b563e7f205c2 412 Gene3D G3DSA:1.10.3430.10 2 412 2.4E-97 T 31-10-2018 IPR029020 Ammonium/urea transporter DY252_02605 551eaaaa12044f686ea2b563e7f205c2 412 SUPERFAMILY SSF111352 7 385 5.62E-95 T 31-10-2018 DY252_02605 551eaaaa12044f686ea2b563e7f205c2 412 Pfam PF00909 Ammonium Transporter Family 12 404 2.0E-89 T 31-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 DY252_16150 1a08b93872c60343b23b93aac3505a94 452 Gene3D G3DSA:1.10.1060.10 4 146 6.4E-39 T 31-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DY252_16150 1a08b93872c60343b23b93aac3505a94 452 SUPERFAMILY SSF46548 28 158 9.42E-32 T 31-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DY252_16150 1a08b93872c60343b23b93aac3505a94 452 Gene3D G3DSA:3.50.50.60 147 274 4.1E-30 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_16150 1a08b93872c60343b23b93aac3505a94 452 Gene3D G3DSA:3.50.50.60 280 452 5.0E-22 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_16150 1a08b93872c60343b23b93aac3505a94 452 SUPERFAMILY SSF51971 146 387 6.47E-58 T 31-10-2018 DY252_16150 1a08b93872c60343b23b93aac3505a94 452 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 28 134 8.5E-35 T 31-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 DY252_16150 1a08b93872c60343b23b93aac3505a94 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 394 8.1E-23 T 31-10-2018 DY252_16150 1a08b93872c60343b23b93aac3505a94 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 402 424 8.1E-23 T 31-10-2018 DY252_16150 1a08b93872c60343b23b93aac3505a94 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 169 8.1E-23 T 31-10-2018 DY252_16150 1a08b93872c60343b23b93aac3505a94 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 301 8.1E-23 T 31-10-2018 DY252_16150 1a08b93872c60343b23b93aac3505a94 452 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 279 303 3.8E-12 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_16150 1a08b93872c60343b23b93aac3505a94 452 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 149 171 3.8E-12 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_16150 1a08b93872c60343b23b93aac3505a94 452 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 412 430 3.8E-12 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_16150 1a08b93872c60343b23b93aac3505a94 452 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 149 436 7.9E-38 T 31-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DY252_13285 a14dcb915cd3b6d93e8920da640f6d6d 111 Pfam PF03992 Antibiotic biosynthesis monooxygenase 27 92 2.6E-7 T 31-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DY252_13285 a14dcb915cd3b6d93e8920da640f6d6d 111 SUPERFAMILY SSF54909 18 107 8.5E-18 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_13285 a14dcb915cd3b6d93e8920da640f6d6d 111 Gene3D G3DSA:3.30.70.100 11 108 2.9E-17 T 31-10-2018 DY252_04865 ad96ca11294e49ee25af1909c7e98e5b 171 Gene3D G3DSA:3.40.630.30 1 170 2.6E-25 T 31-10-2018 DY252_04865 ad96ca11294e49ee25af1909c7e98e5b 171 Pfam PF13673 Acetyltransferase (GNAT) domain 52 150 1.6E-13 T 31-10-2018 IPR000182 GNAT domain DY252_04865 ad96ca11294e49ee25af1909c7e98e5b 171 SUPERFAMILY SSF55729 2 170 1.74E-25 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_06685 376ea0d7f9e29cbf384f53cb71fbe456 261 Pfam PF00149 Calcineurin-like phosphoesterase 1 195 4.0E-19 T 31-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DY252_06685 376ea0d7f9e29cbf384f53cb71fbe456 261 Gene3D G3DSA:3.60.21.10 1 234 3.9E-70 T 31-10-2018 IPR029052 Metallo-dependent phosphatase-like DY252_06685 376ea0d7f9e29cbf384f53cb71fbe456 261 SUPERFAMILY SSF56300 1 214 1.58E-52 T 31-10-2018 DY252_06685 376ea0d7f9e29cbf384f53cb71fbe456 261 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 255 32.615 T 31-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 DY252_12790 561b59bacabf0ef9b2b44483bfac674f 401 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 6 228 35.71 T 31-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DY252_12790 561b59bacabf0ef9b2b44483bfac674f 401 Pfam PF02542 YgbB family 244 396 1.3E-60 T 31-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DY252_12790 561b59bacabf0ef9b2b44483bfac674f 401 SUPERFAMILY SSF53448 8 226 1.21E-55 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_12790 561b59bacabf0ef9b2b44483bfac674f 401 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 107 114 - T 31-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DY252_12790 561b59bacabf0ef9b2b44483bfac674f 401 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 243 398 33.046 T 31-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DY252_12790 561b59bacabf0ef9b2b44483bfac674f 401 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 244 396 2.2E-64 T 31-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DY252_12790 561b59bacabf0ef9b2b44483bfac674f 401 Gene3D G3DSA:3.30.1330.50 242 399 6.1E-66 T 31-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DY252_12790 561b59bacabf0ef9b2b44483bfac674f 401 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 277 292 - T 31-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DY252_12790 561b59bacabf0ef9b2b44483bfac674f 401 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 5 399 42.861 T 31-10-2018 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560 DY252_12790 561b59bacabf0ef9b2b44483bfac674f 401 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 226 2.8E-58 T 31-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DY252_12790 561b59bacabf0ef9b2b44483bfac674f 401 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 225 7.2E-66 T 31-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DY252_12790 561b59bacabf0ef9b2b44483bfac674f 401 Gene3D G3DSA:3.90.550.10 6 241 5.4E-70 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_12790 561b59bacabf0ef9b2b44483bfac674f 401 SUPERFAMILY SSF69765 243 397 1.44E-63 T 31-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DY252_09895 b17f0f2d8b7bf8fe98d30072071bda02 389 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 389 82.4 T 31-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DY252_09895 b17f0f2d8b7bf8fe98d30072071bda02 389 Gene3D G3DSA:3.30.590.20 5 370 5.5E-106 T 31-10-2018 DY252_09895 b17f0f2d8b7bf8fe98d30072071bda02 389 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 292 5.4E-54 T 31-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DY252_09895 b17f0f2d8b7bf8fe98d30072071bda02 389 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 294 1.1E-91 T 31-10-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DY252_09895 b17f0f2d8b7bf8fe98d30072071bda02 389 SUPERFAMILY SSF55931 9 363 1.13E-100 T 31-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DY252_15750 61bf12ff5dea261b6bed60d078309477 595 Pfam PF02690 Na+/Pi-cotransporter 200 286 1.7E-17 T 31-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 DY252_15750 61bf12ff5dea261b6bed60d078309477 595 Pfam PF02690 Na+/Pi-cotransporter 46 181 2.0E-44 T 31-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 DY252_15750 61bf12ff5dea261b6bed60d078309477 595 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 38 346 1.7E-72 T 31-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 DY252_15750 61bf12ff5dea261b6bed60d078309477 595 Gene3D G3DSA:1.20.58.220 370 579 9.0E-13 T 31-10-2018 IPR038078 PhoU-like domain superfamily DY252_15750 61bf12ff5dea261b6bed60d078309477 595 SUPERFAMILY SSF109755 369 574 3.56E-21 T 31-10-2018 DY252_20345 3b6436c3623e3b00526cc00d3db664c0 970 Gene3D G3DSA:1.10.287.1150 109 189 1.5E-24 T 31-10-2018 DY252_20345 3b6436c3623e3b00526cc00d3db664c0 970 Gene3D G3DSA:3.40.50.970 190 557 9.3E-158 T 31-10-2018 DY252_20345 3b6436c3623e3b00526cc00d3db664c0 970 SUPERFAMILY SSF52518 608 823 1.18E-51 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_20345 3b6436c3623e3b00526cc00d3db664c0 970 Pfam PF00676 Dehydrogenase E1 component 238 553 9.5E-66 T 31-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 DY252_20345 3b6436c3623e3b00526cc00d3db664c0 970 PIRSF PIRSF000157 1 969 0.0 T 31-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DY252_20345 3b6436c3623e3b00526cc00d3db664c0 970 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 104 966 0.0 T 31-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DY252_20345 3b6436c3623e3b00526cc00d3db664c0 970 SMART SM00861 623 816 1.6E-63 T 31-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DY252_20345 3b6436c3623e3b00526cc00d3db664c0 970 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 821 967 1.3E-53 T 31-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DY252_20345 3b6436c3623e3b00526cc00d3db664c0 970 Gene3D G3DSA:3.40.50.11610 753 964 1.4E-172 T 31-10-2018 DY252_20345 3b6436c3623e3b00526cc00d3db664c0 970 Pfam PF02779 Transketolase, pyrimidine binding domain 622 817 1.6E-67 T 31-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DY252_20345 3b6436c3623e3b00526cc00d3db664c0 970 SUPERFAMILY SSF52518 144 566 1.83E-93 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_20345 3b6436c3623e3b00526cc00d3db664c0 970 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 8 46 4.1E-14 T 31-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DY252_20345 3b6436c3623e3b00526cc00d3db664c0 970 Gene3D G3DSA:3.40.50.12470 586 833 1.4E-172 T 31-10-2018 DY252_04005 1201e8532ad687458bad462d6a6bc90f 151 Gene3D G3DSA:3.90.1170.40 1 150 8.7E-50 T 31-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DY252_04005 1201e8532ad687458bad462d6a6bc90f 151 SUPERFAMILY SSF54690 4 150 1.44E-50 T 31-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DY252_04005 1201e8532ad687458bad462d6a6bc90f 151 Pfam PF02391 MoaE protein 7 120 1.1E-34 T 31-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DY252_15610 2b8f5d33a5ea1ef4661b65d050e5a3c9 146 SUPERFAMILY SSF51316 5 144 1.73E-59 T 31-10-2018 IPR011057 Mss4-like superfamily DY252_15610 2b8f5d33a5ea1ef4661b65d050e5a3c9 146 Pfam PF01641 SelR domain 12 129 2.2E-49 T 31-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DY252_15610 2b8f5d33a5ea1ef4661b65d050e5a3c9 146 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 2 130 37.269 T 31-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DY252_15610 2b8f5d33a5ea1ef4661b65d050e5a3c9 146 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 8 138 3.1E-61 T 31-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DY252_15610 2b8f5d33a5ea1ef4661b65d050e5a3c9 146 Gene3D G3DSA:2.170.150.20 2 146 9.6E-58 T 31-10-2018 DY252_00120 e2aac551dc0faa9aab0628b62264cc12 421 Pfam PF13439 Glycosyltransferase Family 4 17 218 1.5E-19 T 31-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DY252_00120 e2aac551dc0faa9aab0628b62264cc12 421 Gene3D G3DSA:3.40.50.2000 231 395 1.4E-35 T 31-10-2018 DY252_00120 e2aac551dc0faa9aab0628b62264cc12 421 Gene3D G3DSA:3.40.50.2000 3 223 4.5E-19 T 31-10-2018 DY252_00120 e2aac551dc0faa9aab0628b62264cc12 421 SUPERFAMILY SSF53756 5 414 5.38E-65 T 31-10-2018 DY252_00120 e2aac551dc0faa9aab0628b62264cc12 421 Pfam PF00534 Glycosyl transferases group 1 231 389 8.5E-24 T 31-10-2018 IPR001296 Glycosyl transferase, family 1 DY252_03245 06e20b5be1e7fc6fa9d8f0106eb99fc3 266 Gene3D G3DSA:3.40.50.300 20 266 1.8E-51 T 31-10-2018 DY252_03245 06e20b5be1e7fc6fa9d8f0106eb99fc3 266 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 25 266 1.1E-118 T 31-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD DY252_03245 06e20b5be1e7fc6fa9d8f0106eb99fc3 266 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 244 265 2.3E-7 T 31-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DY252_03245 06e20b5be1e7fc6fa9d8f0106eb99fc3 266 Pfam PF00005 ABC transporter 41 196 5.9E-29 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_03245 06e20b5be1e7fc6fa9d8f0106eb99fc3 266 SUPERFAMILY SSF52540 24 264 7.38E-52 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_09150 6beba0b808a7b67c1ec1c6d2e458b5bc 204 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 185 3.6E-16 T 31-10-2018 DY252_09150 6beba0b808a7b67c1ec1c6d2e458b5bc 204 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 121 187 3.3E-14 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_09150 6beba0b808a7b67c1ec1c6d2e458b5bc 204 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.4E-12 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_09150 6beba0b808a7b67c1ec1c6d2e458b5bc 204 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 1.4E-12 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_09150 6beba0b808a7b67c1ec1c6d2e458b5bc 204 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 1.4E-12 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_09150 6beba0b808a7b67c1ec1c6d2e458b5bc 204 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 177 190 1.4E-12 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_09150 6beba0b808a7b67c1ec1c6d2e458b5bc 204 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 76 182 1.7E-8 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_09150 6beba0b808a7b67c1ec1c6d2e458b5bc 204 Gene3D G3DSA:1.10.150.240 20 85 8.5E-40 T 31-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DY252_09150 6beba0b808a7b67c1ec1c6d2e458b5bc 204 SUPERFAMILY SSF56784 5 199 1.5E-39 T 31-10-2018 IPR036412 HAD-like superfamily DY252_09150 6beba0b808a7b67c1ec1c6d2e458b5bc 204 Gene3D G3DSA:3.40.50.1000 8 185 8.5E-40 T 31-10-2018 IPR023214 HAD superfamily DY252_16420 e029478108a5257523eca7a344402dfb 282 SUPERFAMILY SSF51735 1 244 3.61E-58 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_16420 e029478108a5257523eca7a344402dfb 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 7.0E-9 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_16420 e029478108a5257523eca7a344402dfb 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 7.0E-9 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_16420 e029478108a5257523eca7a344402dfb 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 7.0E-9 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_16420 e029478108a5257523eca7a344402dfb 282 Gene3D G3DSA:3.40.50.720 1 277 8.6E-68 T 31-10-2018 DY252_16420 e029478108a5257523eca7a344402dfb 282 Pfam PF00106 short chain dehydrogenase 3 186 2.2E-44 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_16420 e029478108a5257523eca7a344402dfb 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 6.0E-19 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_16420 e029478108a5257523eca7a344402dfb 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.0E-19 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_16420 e029478108a5257523eca7a344402dfb 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 6.0E-19 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_16420 e029478108a5257523eca7a344402dfb 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 6.0E-19 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_13430 92a01c711e2a32150913a00b74663c1c 475 Pfam PF00361 Proton-conducting membrane transporter 119 412 9.5E-86 T 31-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13430 92a01c711e2a32150913a00b74663c1c 475 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 6 462 1.5E-151 T 31-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 DY252_13430 92a01c711e2a32150913a00b74663c1c 475 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 2 462 18.602 T 31-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 DY252_20865 36a230b00578c11dd4afc4f8a376445f 149 Pfam PF13411 MerR HTH family regulatory protein 1 68 1.3E-18 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_20865 36a230b00578c11dd4afc4f8a376445f 149 SUPERFAMILY SSF46955 1 126 3.33E-38 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_20865 36a230b00578c11dd4afc4f8a376445f 149 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_20865 36a230b00578c11dd4afc4f8a376445f 149 Gene3D G3DSA:1.10.1660.10 1 125 7.8E-36 T 31-10-2018 DY252_20865 36a230b00578c11dd4afc4f8a376445f 149 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.6E-12 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_20865 36a230b00578c11dd4afc4f8a376445f 149 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.6E-12 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_20865 36a230b00578c11dd4afc4f8a376445f 149 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.6E-12 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_20865 36a230b00578c11dd4afc4f8a376445f 149 SMART SM00422 1 70 9.1E-35 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_20865 36a230b00578c11dd4afc4f8a376445f 149 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 3.1E-51 T 31-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 DY252_06835 ee21fb3ccd419688c4340f78c3ad9a32 317 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 118 276 2.9E-24 T 31-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DY252_06835 ee21fb3ccd419688c4340f78c3ad9a32 317 Gene3D G3DSA:3.40.50.2000 130 316 9.1E-38 T 31-10-2018 DY252_06835 ee21fb3ccd419688c4340f78c3ad9a32 317 Gene3D G3DSA:3.40.50.2000 1 99 1.6E-13 T 31-10-2018 DY252_06835 ee21fb3ccd419688c4340f78c3ad9a32 317 SUPERFAMILY SSF53756 2 312 8.16E-59 T 31-10-2018 DY252_10350 cdbd201953bcc7dc0f8c37b634ae3a43 2176 Pfam PF04829 Pre-toxin domain with VENN motif 1712 1753 4.6E-7 T 31-10-2018 IPR006914 VENN motif-containing domain DY252_10350 cdbd201953bcc7dc0f8c37b634ae3a43 2176 Pfam PF13332 Haemagluttinin repeat 1141 1285 5.6E-10 T 31-10-2018 IPR025157 Hemagglutinin repeat DY252_10350 cdbd201953bcc7dc0f8c37b634ae3a43 2176 SUPERFAMILY SSF51126 41 339 1.48E-51 T 31-10-2018 IPR011050 Pectin lyase fold/virulence factor DY252_10350 cdbd201953bcc7dc0f8c37b634ae3a43 2176 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 321 354 0.16 T 31-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DY252_10350 cdbd201953bcc7dc0f8c37b634ae3a43 2176 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 693 727 0.01 T 31-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DY252_10350 cdbd201953bcc7dc0f8c37b634ae3a43 2176 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 382 419 0.25 T 31-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DY252_10350 cdbd201953bcc7dc0f8c37b634ae3a43 2176 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 976 1012 0.0065 T 31-10-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat DY252_10350 cdbd201953bcc7dc0f8c37b634ae3a43 2176 Gene3D G3DSA:2.160.20.10 34 335 2.3E-82 T 31-10-2018 IPR012334 Pectin lyase fold DY252_10350 cdbd201953bcc7dc0f8c37b634ae3a43 2176 Pfam PF05860 haemagglutination activity domain 37 168 8.5E-28 T 31-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal DY252_10350 cdbd201953bcc7dc0f8c37b634ae3a43 2176 SMART SM00912 47 169 2.2E-34 T 31-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal DY252_10350 cdbd201953bcc7dc0f8c37b634ae3a43 2176 Pfam PF04830 Possible hemagglutinin (DUF637) 1532 1694 1.6E-21 T 31-10-2018 IPR006915 Domain of unknown function DUF637, haemagglutinin putative DY252_10350 cdbd201953bcc7dc0f8c37b634ae3a43 2176 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 67 163 8.9E-19 T 31-10-2018 IPR008638 Filamentous haemagglutinin, N-terminal DY252_20060 78db19eb98f43f1c392564da4b8cb018 299 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 122 6.9E-42 T 31-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DY252_20060 78db19eb98f43f1c392564da4b8cb018 299 Hamap MF_01576 Bifunctional protein FolD [folD]. 4 288 38.667 T 31-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DY252_20060 78db19eb98f43f1c392564da4b8cb018 299 SUPERFAMILY SSF51735 124 285 6.24E-51 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_20060 78db19eb98f43f1c392564da4b8cb018 299 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 125 286 1.4E-68 T 31-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DY252_20060 78db19eb98f43f1c392564da4b8cb018 299 SUPERFAMILY SSF53223 4 123 7.96E-42 T 31-10-2018 DY252_20060 78db19eb98f43f1c392564da4b8cb018 299 Gene3D G3DSA:3.40.50.10860 9 281 5.0E-111 T 31-10-2018 DY252_20060 78db19eb98f43f1c392564da4b8cb018 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 76 103 9.6E-83 T 31-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DY252_20060 78db19eb98f43f1c392564da4b8cb018 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 111 132 9.6E-83 T 31-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DY252_20060 78db19eb98f43f1c392564da4b8cb018 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 261 279 9.6E-83 T 31-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DY252_20060 78db19eb98f43f1c392564da4b8cb018 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 205 234 9.6E-83 T 31-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DY252_20060 78db19eb98f43f1c392564da4b8cb018 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 244 260 9.6E-83 T 31-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DY252_20060 78db19eb98f43f1c392564da4b8cb018 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 35 57 9.6E-83 T 31-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DY252_20060 78db19eb98f43f1c392564da4b8cb018 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 156 176 9.6E-83 T 31-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DY252_20060 78db19eb98f43f1c392564da4b8cb018 299 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 265 273 - T 31-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DY252_20060 78db19eb98f43f1c392564da4b8cb018 299 Gene3D G3DSA:3.40.50.720 7 264 5.0E-111 T 31-10-2018 DY252_08920 5a209c4db01ffbf99723024c9cdee514 232 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 1.2E-53 T 31-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein DY252_08920 5a209c4db01ffbf99723024c9cdee514 232 Gene3D G3DSA:3.30.190.20 21 224 3.5E-81 T 31-10-2018 DY252_08920 5a209c4db01ffbf99723024c9cdee514 232 Gene3D G3DSA:3.40.50.790 68 159 3.5E-81 T 31-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich DY252_08920 5a209c4db01ffbf99723024c9cdee514 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 2.6E-101 T 31-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 DY252_08920 5a209c4db01ffbf99723024c9cdee514 232 SUPERFAMILY SSF56808 6 225 4.19E-83 T 31-10-2018 IPR023674 Ribosomal protein L1-like DY252_08920 5a209c4db01ffbf99723024c9cdee514 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.605 T 31-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 DY252_08920 5a209c4db01ffbf99723024c9cdee514 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 120 139 - T 31-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_08920 5a209c4db01ffbf99723024c9cdee514 232 PIRSF PIRSF002155 1 227 1.0E-78 T 31-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_19550 c48f95cfad0ca7ec17c1981cf8a6e300 620 SUPERFAMILY SSF55073 431 537 1.18E-17 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_19550 c48f95cfad0ca7ec17c1981cf8a6e300 620 SMART SM00267 414 587 1.6E-5 T 31-10-2018 IPR000160 GGDEF domain DY252_19550 c48f95cfad0ca7ec17c1981cf8a6e300 620 SUPERFAMILY SSF54631 298 434 7.35E-10 T 31-10-2018 DY252_19550 c48f95cfad0ca7ec17c1981cf8a6e300 620 Pfam PF00990 Diguanylate cyclase, GGDEF domain 430 536 2.6E-13 T 31-10-2018 IPR000160 GGDEF domain DY252_19550 c48f95cfad0ca7ec17c1981cf8a6e300 620 Gene3D G3DSA:3.30.70.270 427 609 1.2E-18 T 31-10-2018 DY252_19550 c48f95cfad0ca7ec17c1981cf8a6e300 620 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 431 534 2.1E-12 T 31-10-2018 IPR000160 GGDEF domain DY252_19550 c48f95cfad0ca7ec17c1981cf8a6e300 620 SMART SM00052 23 265 1.2E-23 T 31-10-2018 IPR001633 EAL domain DY252_19550 c48f95cfad0ca7ec17c1981cf8a6e300 620 Gene3D G3DSA:3.20.20.450 14 275 4.4E-58 T 31-10-2018 IPR035919 EAL domain superfamily DY252_19550 c48f95cfad0ca7ec17c1981cf8a6e300 620 Pfam PF00563 EAL domain 37 260 2.5E-47 T 31-10-2018 IPR001633 EAL domain DY252_19550 c48f95cfad0ca7ec17c1981cf8a6e300 620 SUPERFAMILY SSF141868 38 260 4.32E-56 T 31-10-2018 IPR035919 EAL domain superfamily DY252_19550 c48f95cfad0ca7ec17c1981cf8a6e300 620 Gene3D G3DSA:3.10.580.10 300 426 1.6E-6 T 31-10-2018 DY252_13120 ccf8211ad8d16dac71d0d575ebadff48 163 Pfam PF00255 Glutathione peroxidase 10 114 4.1E-30 T 31-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DY252_13120 ccf8211ad8d16dac71d0d575ebadff48 163 PRINTS PR01011 Glutathione peroxidase family signature 125 134 6.6E-11 T 31-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DY252_13120 ccf8211ad8d16dac71d0d575ebadff48 163 PRINTS PR01011 Glutathione peroxidase family signature 27 44 6.6E-11 T 31-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DY252_13120 ccf8211ad8d16dac71d0d575ebadff48 163 PRINTS PR01011 Glutathione peroxidase family signature 62 78 6.6E-11 T 31-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DY252_13120 ccf8211ad8d16dac71d0d575ebadff48 163 ProSitePatterns PS00460 Glutathione peroxidases active site. 29 44 - T 31-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 DY252_13120 ccf8211ad8d16dac71d0d575ebadff48 163 PIRSF PIRSF000303 1 163 4.9E-56 T 31-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DY252_13120 ccf8211ad8d16dac71d0d575ebadff48 163 SUPERFAMILY SSF52833 8 163 8.16E-49 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_13120 ccf8211ad8d16dac71d0d575ebadff48 163 Gene3D G3DSA:3.40.30.10 1 163 6.3E-53 T 31-10-2018 DY252_05145 5f2524e0624afb27c005e38d6e91726c 415 Gene3D G3DSA:3.30.420.40 216 400 9.1E-28 T 31-10-2018 DY252_05145 5f2524e0624afb27c005e38d6e91726c 415 SUPERFAMILY SSF53067 105 399 5.64E-37 T 31-10-2018 DY252_05145 5f2524e0624afb27c005e38d6e91726c 415 Pfam PF00480 ROK family 108 272 2.4E-16 T 31-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DY252_05145 5f2524e0624afb27c005e38d6e91726c 415 Pfam PF13412 Winged helix-turn-helix DNA-binding 36 80 1.1E-10 T 31-10-2018 DY252_05145 5f2524e0624afb27c005e38d6e91726c 415 Gene3D G3DSA:1.10.10.10 26 100 5.3E-16 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_05145 5f2524e0624afb27c005e38d6e91726c 415 SUPERFAMILY SSF46785 33 94 5.12E-12 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_05145 5f2524e0624afb27c005e38d6e91726c 415 Gene3D G3DSA:3.30.420.40 102 215 1.7E-6 T 31-10-2018 DY252_16530 4cb7bd7fbaaa681b00d5ff27862b80b7 156 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 85 131 3.9E-15 T 31-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 DY252_16530 4cb7bd7fbaaa681b00d5ff27862b80b7 156 SUPERFAMILY SSF46955 85 136 2.2E-5 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_16530 4cb7bd7fbaaa681b00d5ff27862b80b7 156 Pfam PF12728 Helix-turn-helix domain 85 133 9.2E-12 T 31-10-2018 DY252_08345 95445bfffac9854bae9d613b098a451b 344 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 2 154 7.2E-31 T 31-10-2018 IPR017516 AbrB duplication DY252_08345 95445bfffac9854bae9d613b098a451b 344 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 177 332 1.5E-41 T 31-10-2018 IPR017516 AbrB duplication DY252_08345 95445bfffac9854bae9d613b098a451b 344 Pfam PF05145 Transition state regulatory protein AbrB 22 333 3.8E-87 T 31-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 DY252_08345 95445bfffac9854bae9d613b098a451b 344 PIRSF PIRSF038991 1 341 2.5E-68 T 31-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 DY252_02530 5db3aa04df3ad8a6055590b95e99d34b 691 Pfam PF08448 PAS fold 330 436 1.9E-7 T 31-10-2018 IPR013656 PAS fold-4 DY252_02530 5db3aa04df3ad8a6055590b95e99d34b 691 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 326 441 1.1E-9 T 31-10-2018 IPR000014 PAS domain DY252_02530 5db3aa04df3ad8a6055590b95e99d34b 691 SMART SM00388 455 523 1.4E-9 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_02530 5db3aa04df3ad8a6055590b95e99d34b 691 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 563 677 2.1E-24 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_02530 5db3aa04df3ad8a6055590b95e99d34b 691 SUPERFAMILY SSF55785 331 435 5.53E-13 T 31-10-2018 IPR035965 PAS domain superfamily DY252_02530 5db3aa04df3ad8a6055590b95e99d34b 691 SUPERFAMILY SSF55874 524 680 2.36E-34 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_02530 5db3aa04df3ad8a6055590b95e99d34b 691 Gene3D G3DSA:3.30.450.20 322 431 9.9E-11 T 31-10-2018 DY252_02530 5db3aa04df3ad8a6055590b95e99d34b 691 SMART SM00091 324 390 1.0E-7 T 31-10-2018 IPR000014 PAS domain DY252_02530 5db3aa04df3ad8a6055590b95e99d34b 691 SUPERFAMILY SSF47384 441 521 1.75E-16 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_02530 5db3aa04df3ad8a6055590b95e99d34b 691 Gene3D G3DSA:3.30.565.10 526 686 1.1E-35 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_02530 5db3aa04df3ad8a6055590b95e99d34b 691 SMART SM00387 563 680 8.5E-37 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_02530 5db3aa04df3ad8a6055590b95e99d34b 691 Pfam PF00512 His Kinase A (phospho-acceptor) domain 456 521 1.5E-9 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_02530 5db3aa04df3ad8a6055590b95e99d34b 691 Gene3D G3DSA:1.10.287.130 432 520 1.7E-14 T 31-10-2018 DY252_02530 5db3aa04df3ad8a6055590b95e99d34b 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 655 2.5E-9 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_02530 5db3aa04df3ad8a6055590b95e99d34b 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 619 2.5E-9 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 Gene3D G3DSA:3.30.450.20 22 124 5.2E-13 T 31-10-2018 DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 Pfam PF00990 Diguanylate cyclase, GGDEF domain 540 697 1.2E-47 T 31-10-2018 IPR000160 GGDEF domain DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 538 698 5.6E-47 T 31-10-2018 IPR000160 GGDEF domain DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 SMART SM00267 529 701 7.3E-68 T 31-10-2018 IPR000160 GGDEF domain DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 407 535 6.1E-12 T 31-10-2018 IPR000014 PAS domain DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 398 7.3E-15 T 31-10-2018 IPR000014 PAS domain DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 148 273 8.0E-11 T 31-10-2018 IPR000014 PAS domain DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 Gene3D G3DSA:3.30.450.20 135 270 9.3E-15 T 31-10-2018 DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 Gene3D G3DSA:3.30.450.20 403 525 2.6E-31 T 31-10-2018 DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 Gene3D G3DSA:3.30.450.20 271 389 7.2E-17 T 31-10-2018 DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 SUPERFAMILY SSF55785 265 389 4.61E-18 T 31-10-2018 IPR035965 PAS domain superfamily DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 Gene3D G3DSA:3.30.70.270 534 705 2.6E-57 T 31-10-2018 DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 SUPERFAMILY SSF55785 36 117 7.96E-9 T 31-10-2018 IPR035965 PAS domain superfamily DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 Pfam PF08448 PAS fold 299 392 8.3E-8 T 31-10-2018 IPR013656 PAS fold-4 DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 SMART SM00086 225 268 2.2 T 31-10-2018 IPR001610 PAC motif DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 SMART SM00086 87 128 23.0 T 31-10-2018 IPR001610 PAC motif DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 SMART SM00086 351 391 50.0 T 31-10-2018 IPR001610 PAC motif DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 SMART SM00086 486 529 8.6E-10 T 31-10-2018 IPR001610 PAC motif DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 SUPERFAMILY SSF55785 418 530 1.52E-23 T 31-10-2018 IPR035965 PAS domain superfamily DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 SUPERFAMILY SSF55073 545 701 2.75E-50 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 SMART SM00091 146 216 0.0047 T 31-10-2018 IPR000014 PAS domain DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 SMART SM00091 280 346 0.0039 T 31-10-2018 IPR000014 PAS domain DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 SMART SM00091 410 479 0.011 T 31-10-2018 IPR000014 PAS domain DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 SUPERFAMILY SSF55785 151 271 1.03E-12 T 31-10-2018 IPR035965 PAS domain superfamily DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 Pfam PF08447 PAS fold 434 523 4.0E-24 T 31-10-2018 IPR013655 PAS fold-3 GO:0005515 DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 Pfam PF08447 PAS fold 38 116 2.8E-12 T 31-10-2018 IPR013655 PAS fold-3 GO:0005515 DY252_09180 41a860a39a1e28d50c1f56ebc9b46e2c 729 Pfam PF00989 PAS fold 149 252 4.4E-7 T 31-10-2018 IPR013767 PAS fold GO:0006355 DY252_10940 918486e23ee69698e401e9b4b5251563 420 Gene3D G3DSA:1.20.1250.20 222 420 2.0E-19 T 31-10-2018 DY252_10940 918486e23ee69698e401e9b4b5251563 420 Pfam PF07690 Major Facilitator Superfamily 28 330 2.5E-32 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_10940 918486e23ee69698e401e9b4b5251563 420 Gene3D G3DSA:1.20.1250.20 21 208 3.2E-27 T 31-10-2018 DY252_10940 918486e23ee69698e401e9b4b5251563 420 SUPERFAMILY SSF103473 7 418 5.49E-55 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_08415 7c964c32eb7b7f093a13da3959100cbc 377 Gene3D G3DSA:3.40.50.2300 36 368 1.1E-103 T 31-10-2018 DY252_08415 7c964c32eb7b7f093a13da3959100cbc 377 Pfam PF13407 Periplasmic binding protein domain 36 297 6.2E-31 T 31-10-2018 IPR025997 Periplasmic binding protein DY252_08415 7c964c32eb7b7f093a13da3959100cbc 377 Gene3D G3DSA:3.40.50.2300 152 293 1.1E-103 T 31-10-2018 DY252_08415 7c964c32eb7b7f093a13da3959100cbc 377 SUPERFAMILY SSF53822 35 338 1.34E-44 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_06405 9f888bfdbac31cd334ca0de38c172066 195 Pfam PF00565 Staphylococcal nuclease homologue 84 166 3.5E-6 T 31-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 DY252_06405 9f888bfdbac31cd334ca0de38c172066 195 Gene3D G3DSA:2.40.50.90 50 176 9.2E-13 T 31-10-2018 IPR035437 SNase-like, OB-fold superfamily DY252_06405 9f888bfdbac31cd334ca0de38c172066 195 SUPERFAMILY SSF50199 51 170 1.22E-18 T 31-10-2018 DY252_06405 9f888bfdbac31cd334ca0de38c172066 195 SMART SM00318 50 167 0.0057 T 31-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 DY252_20740 ce155db7b86dffc857743355e83205e8 234 SMART SM00248 90 117 45.0 T 31-10-2018 IPR002110 Ankyrin repeat GO:0005515 DY252_20740 ce155db7b86dffc857743355e83205e8 234 SMART SM00248 53 86 25.0 T 31-10-2018 IPR002110 Ankyrin repeat GO:0005515 DY252_20740 ce155db7b86dffc857743355e83205e8 234 SUPERFAMILY SSF48403 26 184 1.52E-16 T 31-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily DY252_20740 ce155db7b86dffc857743355e83205e8 234 Gene3D G3DSA:1.25.40.20 23 98 4.7E-11 T 31-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily DY252_20740 ce155db7b86dffc857743355e83205e8 234 Pfam PF12796 Ankyrin repeats (3 copies) 34 118 8.5E-9 T 31-10-2018 IPR020683 Ankyrin repeat-containing domain DY252_20740 ce155db7b86dffc857743355e83205e8 234 Gene3D G3DSA:1.25.40.20 99 187 4.9E-6 T 31-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily DY252_03975 114780d1fed4b58fbb52c959129e8ca3 320 Pfam PF01699 Sodium/calcium exchanger protein 8 145 1.2E-22 T 31-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 DY252_03975 114780d1fed4b58fbb52c959129e8ca3 320 Pfam PF01699 Sodium/calcium exchanger protein 179 315 7.8E-30 T 31-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 DY252_03975 114780d1fed4b58fbb52c959129e8ca3 320 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 9 313 1.1E-74 T 31-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 DY252_03975 114780d1fed4b58fbb52c959129e8ca3 320 Gene3D G3DSA:1.20.58.1130 11 209 3.1E-83 T 31-10-2018 DY252_03975 114780d1fed4b58fbb52c959129e8ca3 320 Gene3D G3DSA:1.20.1420.30 37 311 3.1E-83 T 31-10-2018 DY252_14090 b8502a267af18c1f1ebb0778439a54cd 284 Gene3D G3DSA:3.30.980.20 85 173 1.0E-60 T 31-10-2018 DY252_14090 b8502a267af18c1f1ebb0778439a54cd 284 Gene3D G3DSA:3.40.50.1000 9 257 1.0E-60 T 31-10-2018 IPR023214 HAD superfamily DY252_14090 b8502a267af18c1f1ebb0778439a54cd 284 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 82 3.2E-7 T 31-10-2018 DY252_14090 b8502a267af18c1f1ebb0778439a54cd 284 SUPERFAMILY SSF56784 8 264 4.19E-32 T 31-10-2018 IPR036412 HAD-like superfamily DY252_14090 b8502a267af18c1f1ebb0778439a54cd 284 TIGRFAM TIGR01486 HAD-SF-IIB-MPGP: mannosyl-3-phosphoglycerate phosphatase family 9 265 2.9E-56 T 31-10-2018 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 DY252_14090 b8502a267af18c1f1ebb0778439a54cd 284 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 8 227 2.3E-17 T 31-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DY252_10065 26a12b9a804a5a0c6f710d14c53c782a 234 Pfam PF14520 Helix-hairpin-helix domain 72 130 3.4E-14 T 31-10-2018 DY252_10065 26a12b9a804a5a0c6f710d14c53c782a 234 Pfam PF01330 RuvA N terminal domain 2 62 8.8E-17 T 31-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 DY252_10065 26a12b9a804a5a0c6f710d14c53c782a 234 SUPERFAMILY SSF47781 66 134 2.09E-20 T 31-10-2018 IPR010994 RuvA domain 2-like DY252_10065 26a12b9a804a5a0c6f710d14c53c782a 234 SUPERFAMILY SSF46929 186 233 5.1E-9 T 31-10-2018 IPR036267 RuvA, C-terminal domain superfamily DY252_10065 26a12b9a804a5a0c6f710d14c53c782a 234 Gene3D G3DSA:1.10.150.20 67 138 3.6E-22 T 31-10-2018 DY252_10065 26a12b9a804a5a0c6f710d14c53c782a 234 Gene3D G3DSA:1.10.8.10 184 232 3.4E-9 T 31-10-2018 DY252_10065 26a12b9a804a5a0c6f710d14c53c782a 234 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 233 27.287 T 31-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 DY252_10065 26a12b9a804a5a0c6f710d14c53c782a 234 Pfam PF07499 RuvA, C-terminal domain 186 233 1.8E-12 T 31-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 DY252_10065 26a12b9a804a5a0c6f710d14c53c782a 234 Gene3D G3DSA:2.40.50.140 1 66 6.8E-20 T 31-10-2018 DY252_10065 26a12b9a804a5a0c6f710d14c53c782a 234 SUPERFAMILY SSF50249 2 63 1.31E-13 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_10065 26a12b9a804a5a0c6f710d14c53c782a 234 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 220 7.2E-36 T 31-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 DY252_10065 26a12b9a804a5a0c6f710d14c53c782a 234 SMART SM00278 73 92 13.0 T 31-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DY252_10065 26a12b9a804a5a0c6f710d14c53c782a 234 SMART SM00278 108 127 4.6 T 31-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DY252_20200 f565b83f7660b0883dd64820138c514c 836 Pfam PF02687 FtsX-like permease family 279 361 3.2E-8 T 31-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DY252_08305 0e943d3eac0d30f635b1e95d64282130 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 1.1E-51 T 31-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DY252_08305 0e943d3eac0d30f635b1e95d64282130 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.1E-51 T 31-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DY252_08305 0e943d3eac0d30f635b1e95d64282130 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.1E-51 T 31-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DY252_08305 0e943d3eac0d30f635b1e95d64282130 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 1.1E-51 T 31-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DY252_08305 0e943d3eac0d30f635b1e95d64282130 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 1.1E-51 T 31-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DY252_08305 0e943d3eac0d30f635b1e95d64282130 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 3.8E-100 T 31-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DY252_08305 0e943d3eac0d30f635b1e95d64282130 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 3.9E-41 T 31-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DY252_08305 0e943d3eac0d30f635b1e95d64282130 264 Gene3D G3DSA:3.30.572.10 1 264 8.8E-134 T 31-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DY252_08305 0e943d3eac0d30f635b1e95d64282130 264 Pfam PF00303 Thymidylate synthase 2 264 1.1E-127 T 31-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DY252_08305 0e943d3eac0d30f635b1e95d64282130 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 31-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DY252_08305 0e943d3eac0d30f635b1e95d64282130 264 SUPERFAMILY SSF55831 1 264 1.96E-132 T 31-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DY252_08305 0e943d3eac0d30f635b1e95d64282130 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.675 T 31-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DY252_14385 f8756eca617954bf12f6c914fcba626b 326 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 308 324 2.1E-5 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_14385 f8756eca617954bf12f6c914fcba626b 326 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 293 308 2.1E-5 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_14385 f8756eca617954bf12f6c914fcba626b 326 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 278 320 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_14385 f8756eca617954bf12f6c914fcba626b 326 Gene3D G3DSA:1.10.10.60 225 326 1.7E-24 T 31-10-2018 DY252_14385 f8756eca617954bf12f6c914fcba626b 326 Pfam PF12833 Helix-turn-helix domain 247 326 2.1E-22 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_14385 f8756eca617954bf12f6c914fcba626b 326 SUPERFAMILY SSF46689 278 325 7.17E-10 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_14385 f8756eca617954bf12f6c914fcba626b 326 SUPERFAMILY SSF46689 224 275 3.85E-6 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_14385 f8756eca617954bf12f6c914fcba626b 326 SMART SM00342 241 324 1.1E-24 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_12195 82a78627682ebb0f7764ba1c3807d3ac 125 SMART SM01323 18 101 2.7E-45 T 31-10-2018 IPR003849 Preprotein translocase YajC DY252_12195 82a78627682ebb0f7764ba1c3807d3ac 125 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 1.7E-16 T 31-10-2018 IPR003849 Preprotein translocase YajC DY252_12195 82a78627682ebb0f7764ba1c3807d3ac 125 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 1.7E-16 T 31-10-2018 IPR003849 Preprotein translocase YajC DY252_12195 82a78627682ebb0f7764ba1c3807d3ac 125 Pfam PF02699 Preprotein translocase subunit 21 98 4.0E-30 T 31-10-2018 IPR003849 Preprotein translocase YajC DY252_12195 82a78627682ebb0f7764ba1c3807d3ac 125 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 101 2.5E-27 T 31-10-2018 IPR003849 Preprotein translocase YajC DY252_05270 bb3a8ae15476c53460fc31becedba018 455 SUPERFAMILY SSF55785 29 132 5.93E-21 T 31-10-2018 IPR035965 PAS domain superfamily DY252_05270 bb3a8ae15476c53460fc31becedba018 455 Gene3D G3DSA:3.30.450.20 14 149 4.9E-20 T 31-10-2018 DY252_05270 bb3a8ae15476c53460fc31becedba018 455 Pfam PF13426 PAS domain 36 133 8.5E-13 T 31-10-2018 IPR000014 PAS domain DY252_05270 bb3a8ae15476c53460fc31becedba018 455 SUPERFAMILY SSF55785 152 254 1.36E-23 T 31-10-2018 IPR035965 PAS domain superfamily DY252_05270 bb3a8ae15476c53460fc31becedba018 455 Pfam PF08447 PAS fold 165 250 6.4E-14 T 31-10-2018 IPR013655 PAS fold-3 GO:0005515 DY252_05270 bb3a8ae15476c53460fc31becedba018 455 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 34 137 1.2E-12 T 31-10-2018 IPR000014 PAS domain DY252_05270 bb3a8ae15476c53460fc31becedba018 455 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 148 259 4.4E-17 T 31-10-2018 IPR000014 PAS domain DY252_05270 bb3a8ae15476c53460fc31becedba018 455 SUPERFAMILY SSF58104 252 452 2.75E-7 T 31-10-2018 DY252_05270 bb3a8ae15476c53460fc31becedba018 455 Gene3D G3DSA:3.30.450.20 150 296 2.8E-21 T 31-10-2018 DY252_05270 bb3a8ae15476c53460fc31becedba018 455 SMART SM00086 215 257 1.3E-4 T 31-10-2018 IPR001610 PAC motif DY252_05270 bb3a8ae15476c53460fc31becedba018 455 SMART SM00086 93 135 0.15 T 31-10-2018 IPR001610 PAC motif DY252_04565 ecbf729f880f759fda92d35a5fafb5c2 118 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 104 4.6E-24 T 31-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like DY252_03660 85f7a18cc897f6c541c22664b78e7dd9 134 SUPERFAMILY SSF51120 7 132 2.62E-28 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_03660 85f7a18cc897f6c541c22664b78e7dd9 134 Pfam PF08548 Peptidase M10 serralysin C terminal 32 130 2.1E-5 T 31-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 DY252_03660 85f7a18cc897f6c541c22664b78e7dd9 134 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 38 56 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_03660 85f7a18cc897f6c541c22664b78e7dd9 134 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 15 31 2.0E-4 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_03660 85f7a18cc897f6c541c22664b78e7dd9 134 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 41 58 8.1E-4 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_03660 85f7a18cc897f6c541c22664b78e7dd9 134 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 20 38 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_03660 85f7a18cc897f6c541c22664b78e7dd9 134 Gene3D G3DSA:2.150.10.10 2 131 3.9E-27 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_03660 85f7a18cc897f6c541c22664b78e7dd9 134 PRINTS PR00313 NodO calcium binding signature 51 60 5.5E-12 T 31-10-2018 DY252_03660 85f7a18cc897f6c541c22664b78e7dd9 134 PRINTS PR00313 NodO calcium binding signature 33 41 5.5E-12 T 31-10-2018 DY252_03660 85f7a18cc897f6c541c22664b78e7dd9 134 PRINTS PR00313 NodO calcium binding signature 42 50 5.5E-12 T 31-10-2018 DY252_03660 85f7a18cc897f6c541c22664b78e7dd9 134 PRINTS PR00313 NodO calcium binding signature 12 23 5.5E-12 T 31-10-2018 DY252_17330 fde5d66fdb3aebcf6aff54dc27edc3db 301 Pfam PF03466 LysR substrate binding domain 95 291 7.4E-38 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_17330 fde5d66fdb3aebcf6aff54dc27edc3db 301 SUPERFAMILY SSF46785 6 114 9.37E-18 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_17330 fde5d66fdb3aebcf6aff54dc27edc3db 301 Gene3D G3DSA:1.10.10.10 6 92 6.9E-22 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_17330 fde5d66fdb3aebcf6aff54dc27edc3db 301 Gene3D G3DSA:3.40.190.290 94 294 5.6E-57 T 31-10-2018 DY252_17330 fde5d66fdb3aebcf6aff54dc27edc3db 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.2E-14 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_17330 fde5d66fdb3aebcf6aff54dc27edc3db 301 SUPERFAMILY SSF53850 94 297 1.23E-42 T 31-10-2018 DY252_12150 161f10434863aa0deb77d88dafe5bb72 347 Gene3D G3DSA:2.40.50.140 279 336 2.8E-11 T 31-10-2018 DY252_12150 161f10434863aa0deb77d88dafe5bb72 347 Pfam PF08402 TOBE domain 272 344 1.2E-6 T 31-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DY252_12150 161f10434863aa0deb77d88dafe5bb72 347 SUPERFAMILY SSF52540 5 246 5.46E-79 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12150 161f10434863aa0deb77d88dafe5bb72 347 SUPERFAMILY SSF50331 239 344 6.46E-12 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_12150 161f10434863aa0deb77d88dafe5bb72 347 SMART SM00382 29 214 3.8E-17 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_12150 161f10434863aa0deb77d88dafe5bb72 347 Gene3D G3DSA:3.40.50.300 4 224 4.2E-64 T 31-10-2018 DY252_12150 161f10434863aa0deb77d88dafe5bb72 347 Pfam PF00005 ABC transporter 20 164 5.0E-32 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_12150 161f10434863aa0deb77d88dafe5bb72 347 Gene3D G3DSA:2.40.50.940 225 344 2.8E-11 T 31-10-2018 DY252_12150 161f10434863aa0deb77d88dafe5bb72 347 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_09165 726851843819427c68a1571521891e4a 261 Pfam PF00005 ABC transporter 24 169 2.0E-29 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_09165 726851843819427c68a1571521891e4a 261 SUPERFAMILY SSF52540 6 241 1.89E-62 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_09165 726851843819427c68a1571521891e4a 261 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_09165 726851843819427c68a1571521891e4a 261 SMART SM00382 32 220 2.0E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_09165 726851843819427c68a1571521891e4a 261 Gene3D G3DSA:3.40.50.300 3 256 3.1E-62 T 31-10-2018 DY252_19955 dc163516818b161c9e0fb7a9575baf9f 224 SUPERFAMILY SSF50346 105 177 6.02E-15 T 31-10-2018 IPR011033 PRC-barrel-like superfamily DY252_19955 dc163516818b161c9e0fb7a9575baf9f 224 Gene3D G3DSA:2.40.30.60 12 98 3.0E-22 T 31-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 DY252_19955 dc163516818b161c9e0fb7a9575baf9f 224 Pfam PF05239 PRC-barrel domain 102 178 4.4E-10 T 31-10-2018 IPR027275 PRC-barrel domain DY252_19955 dc163516818b161c9e0fb7a9575baf9f 224 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 177 25.193 T 31-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 DY252_19955 dc163516818b161c9e0fb7a9575baf9f 224 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 13 177 2.0E-41 T 31-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 DY252_19955 dc163516818b161c9e0fb7a9575baf9f 224 Pfam PF01782 RimM N-terminal domain 16 94 2.3E-21 T 31-10-2018 IPR002676 RimM, N-terminal GO:0006364 DY252_19955 dc163516818b161c9e0fb7a9575baf9f 224 Gene3D G3DSA:2.30.30.240 100 183 5.4E-14 T 31-10-2018 DY252_19955 dc163516818b161c9e0fb7a9575baf9f 224 SUPERFAMILY SSF50447 13 98 2.59E-20 T 31-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DY252_11415 333d709f52854d70304fd03e9b9c33ea 288 Pfam PF00140 Sigma-70 factor, region 1.2 13 41 6.7E-7 T 31-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DY252_11415 333d709f52854d70304fd03e9b9c33ea 288 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_11415 333d709f52854d70304fd03e9b9c33ea 288 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 76 89 - T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_11415 333d709f52854d70304fd03e9b9c33ea 288 Pfam PF04542 Sigma-70 region 2 52 117 7.1E-17 T 31-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DY252_11415 333d709f52854d70304fd03e9b9c33ea 288 Gene3D G3DSA:1.10.10.10 223 286 3.7E-14 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_11415 333d709f52854d70304fd03e9b9c33ea 288 Gene3D G3DSA:1.20.120.1810 19 119 5.6E-29 T 31-10-2018 DY252_11415 333d709f52854d70304fd03e9b9c33ea 288 SUPERFAMILY SSF88946 10 120 9.73E-37 T 31-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DY252_11415 333d709f52854d70304fd03e9b9c33ea 288 SUPERFAMILY SSF88659 189 283 1.61E-16 T 31-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DY252_11415 333d709f52854d70304fd03e9b9c33ea 288 PRINTS PR00046 Major sigma-70 factor signature 252 267 2.5E-20 T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_11415 333d709f52854d70304fd03e9b9c33ea 288 PRINTS PR00046 Major sigma-70 factor signature 76 89 2.5E-20 T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_11415 333d709f52854d70304fd03e9b9c33ea 288 PRINTS PR00046 Major sigma-70 factor signature 100 108 2.5E-20 T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_11415 333d709f52854d70304fd03e9b9c33ea 288 PRINTS PR00046 Major sigma-70 factor signature 233 245 2.5E-20 T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_11415 333d709f52854d70304fd03e9b9c33ea 288 PRINTS PR00046 Major sigma-70 factor signature 267 278 2.5E-20 T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_11415 333d709f52854d70304fd03e9b9c33ea 288 PIRSF PIRSF000770 10 288 3.6E-36 T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_11415 333d709f52854d70304fd03e9b9c33ea 288 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 281 1.6E-28 T 31-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DY252_11415 333d709f52854d70304fd03e9b9c33ea 288 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 283 6.3E-104 T 31-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 DY252_11415 333d709f52854d70304fd03e9b9c33ea 288 Pfam PF04545 Sigma-70, region 4 229 280 9.4E-15 T 31-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DY252_10615 7f56e183dcb03a004912f766b7effd91 159 SUPERFAMILY SSF54909 66 155 3.35E-21 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_10615 7f56e183dcb03a004912f766b7effd91 159 SMART SM00344 6 115 9.0E-44 T 31-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DY252_10615 7f56e183dcb03a004912f766b7effd91 159 Gene3D G3DSA:3.30.70.920 59 143 2.2E-25 T 31-10-2018 DY252_10615 7f56e183dcb03a004912f766b7effd91 159 Pfam PF01037 Lrp/AsnC ligand binding domain 72 145 1.2E-21 T 31-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DY252_10615 7f56e183dcb03a004912f766b7effd91 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 31-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DY252_10615 7f56e183dcb03a004912f766b7effd91 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 6.0E-22 T 31-10-2018 DY252_10615 7f56e183dcb03a004912f766b7effd91 159 Gene3D G3DSA:1.10.10.10 6 58 3.3E-26 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_10615 7f56e183dcb03a004912f766b7effd91 159 SUPERFAMILY SSF46785 4 95 5.15E-18 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_10615 7f56e183dcb03a004912f766b7effd91 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 1.1E-18 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_10615 7f56e183dcb03a004912f766b7effd91 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 1.1E-18 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_10615 7f56e183dcb03a004912f766b7effd91 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 1.1E-18 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_16020 c2b4602d316ea3ff0cd74678d252d3fc 321 PIRSF PIRSF018266 4 321 9.8E-65 T 31-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component DY252_16020 c2b4602d316ea3ff0cd74678d252d3fc 321 Pfam PF16220 Domain of unknown function (DUF4880) 13 53 2.2E-10 T 31-10-2018 IPR032623 FecR, N-terminal DY252_16020 c2b4602d316ea3ff0cd74678d252d3fc 321 Gene3D G3DSA:2.60.120.1440 104 246 3.1E-25 T 31-10-2018 DY252_16020 c2b4602d316ea3ff0cd74678d252d3fc 321 Pfam PF04773 FecR protein 117 209 1.7E-20 T 31-10-2018 IPR006860 FecR protein DY252_21190 73cf0afe31fbc5995f7814e7b1766229 292 SUPERFAMILY SSF53474 7 255 4.67E-27 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_21190 73cf0afe31fbc5995f7814e7b1766229 292 Gene3D G3DSA:3.40.50.1820 1 269 2.9E-26 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_21190 73cf0afe31fbc5995f7814e7b1766229 292 PIRSF PIRSF037442 3 286 2.7E-74 T 31-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 DY252_21190 73cf0afe31fbc5995f7814e7b1766229 292 Pfam PF12146 Serine aminopeptidase, S33 32 116 5.6E-10 T 31-10-2018 IPR022742 Serine aminopeptidase, S33 DY252_01555 4cbc2bce016426309d68654436cec315 119 Gene3D G3DSA:1.10.260.40 2 79 1.1E-12 T 31-10-2018 DY252_01555 4cbc2bce016426309d68654436cec315 119 SUPERFAMILY SSF47413 3 60 4.02E-12 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_01555 4cbc2bce016426309d68654436cec315 119 SMART SM00530 7 63 1.3E-9 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_01555 4cbc2bce016426309d68654436cec315 119 Pfam PF13560 Helix-turn-helix domain 4 64 7.2E-11 T 31-10-2018 DY252_13970 eb7776569d30d7fd0014b3eaf3137054 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.6E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_13970 eb7776569d30d7fd0014b3eaf3137054 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.6E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_13970 eb7776569d30d7fd0014b3eaf3137054 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.6E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_13970 eb7776569d30d7fd0014b3eaf3137054 313 Gene3D G3DSA:3.40.190.10 171 273 2.7E-37 T 31-10-2018 DY252_13970 eb7776569d30d7fd0014b3eaf3137054 313 Gene3D G3DSA:1.10.10.10 5 93 3.7E-26 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_13970 eb7776569d30d7fd0014b3eaf3137054 313 TIGRFAM TIGR02424 TF_pcaQ: pca operon transcription factor PcaQ 4 302 4.0E-121 T 31-10-2018 IPR012787 Pca transcription factor PcaQ GO:0003677|GO:0019619|GO:0045893 DY252_13970 eb7776569d30d7fd0014b3eaf3137054 313 SUPERFAMILY SSF53850 97 305 6.52E-32 T 31-10-2018 DY252_13970 eb7776569d30d7fd0014b3eaf3137054 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.8E-20 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_13970 eb7776569d30d7fd0014b3eaf3137054 313 SUPERFAMILY SSF46785 4 87 8.59E-22 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_13970 eb7776569d30d7fd0014b3eaf3137054 313 Pfam PF03466 LysR substrate binding domain 97 301 1.0E-29 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_13970 eb7776569d30d7fd0014b3eaf3137054 313 Gene3D G3DSA:3.40.190.10 98 290 2.7E-37 T 31-10-2018 DY252_11030 fd9b6c3fedb4bcfcf6989873a0113a53 349 Gene3D G3DSA:1.10.8.760 183 247 1.8E-32 T 31-10-2018 DY252_11030 fd9b6c3fedb4bcfcf6989873a0113a53 349 SUPERFAMILY SSF159501 60 333 4.13E-48 T 31-10-2018 DY252_11030 fd9b6c3fedb4bcfcf6989873a0113a53 349 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 78 284 7.1E-43 T 31-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN DY252_11030 fd9b6c3fedb4bcfcf6989873a0113a53 349 Gene3D G3DSA:3.40.50.11550 66 291 1.8E-32 T 31-10-2018 DY252_14445 cb0cde53927d3340419bf88c33791225 936 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 5 886 23.85 T 31-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DY252_14445 cb0cde53927d3340419bf88c33791225 936 Gene3D G3DSA:3.90.199.10 38 517 8.8E-225 T 31-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DY252_14445 cb0cde53927d3340419bf88c33791225 936 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 13 885 0.0 T 31-10-2018 DY252_14445 cb0cde53927d3340419bf88c33791225 936 SUPERFAMILY SSF56719 35 517 1.83E-179 T 31-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DY252_14445 cb0cde53927d3340419bf88c33791225 936 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 738 5.6E-12 T 31-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DY252_14445 cb0cde53927d3340419bf88c33791225 936 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 643 688 3.1E-6 T 31-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DY252_14445 cb0cde53927d3340419bf88c33791225 936 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 586 633 1.9E-4 T 31-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DY252_14445 cb0cde53927d3340419bf88c33791225 936 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 534 581 3.9E-11 T 31-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DY252_14445 cb0cde53927d3340419bf88c33791225 936 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 838 884 5.5E-13 T 31-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DY252_14445 cb0cde53927d3340419bf88c33791225 936 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 788 830 5.0E-10 T 31-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DY252_14445 cb0cde53927d3340419bf88c33791225 936 Gene3D G3DSA:1.10.268.10 374 489 8.8E-225 T 31-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DY252_14445 cb0cde53927d3340419bf88c33791225 936 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 37 494 1.7E-153 T 31-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DY252_14445 cb0cde53927d3340419bf88c33791225 936 SMART SM00434 16 495 3.8E-280 T 31-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DY252_14445 cb0cde53927d3340419bf88c33791225 936 SUPERFAMILY SSF101904 529 894 1.96E-99 T 31-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DY252_14445 cb0cde53927d3340419bf88c33791225 936 Gene3D G3DSA:3.30.1360.40 241 337 8.8E-225 T 31-10-2018 DY252_16380 d4594aefc7731af2f246632f42f1d360 800 Gene3D G3DSA:2.170.130.10 148 283 1.3E-33 T 31-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DY252_16380 d4594aefc7731af2f246632f42f1d360 800 SUPERFAMILY SSF56935 132 800 8.24E-127 T 31-10-2018 DY252_16380 d4594aefc7731af2f246632f42f1d360 800 Pfam PF00593 TonB dependent receptor 357 799 8.9E-66 T 31-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DY252_16380 d4594aefc7731af2f246632f42f1d360 800 Gene3D G3DSA:2.40.170.20 284 800 8.0E-122 T 31-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DY252_16380 d4594aefc7731af2f246632f42f1d360 800 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 174 798 3.0E-108 T 31-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DY252_16380 d4594aefc7731af2f246632f42f1d360 800 SMART SM00965 72 123 1.8E-7 T 31-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 DY252_16380 d4594aefc7731af2f246632f42f1d360 800 Gene3D G3DSA:3.55.50.30 43 145 6.0E-26 T 31-10-2018 DY252_16380 d4594aefc7731af2f246632f42f1d360 800 Pfam PF07715 TonB-dependent Receptor Plug Domain 172 272 1.2E-19 T 31-10-2018 IPR012910 TonB-dependent receptor, plug domain DY252_14750 84549f2c5a727441c0ffedbf08eb3d87 206 Gene3D G3DSA:1.20.1280.20 119 204 6.1E-20 T 31-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DY252_14750 84549f2c5a727441c0ffedbf08eb3d87 206 Gene3D G3DSA:1.10.287.110 1 110 2.6E-29 T 31-10-2018 IPR036869 Chaperone J-domain superfamily DY252_14750 84549f2c5a727441c0ffedbf08eb3d87 206 SUPERFAMILY SSF46565 39 111 1.57E-16 T 31-10-2018 IPR036869 Chaperone J-domain superfamily DY252_14750 84549f2c5a727441c0ffedbf08eb3d87 206 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 50 202 3.8E-30 T 31-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DY252_14750 84549f2c5a727441c0ffedbf08eb3d87 206 Pfam PF07743 HSCB C-terminal oligomerisation domain 126 196 2.6E-17 T 31-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DY252_14750 84549f2c5a727441c0ffedbf08eb3d87 206 SMART SM00271 38 103 4.1E-7 T 31-10-2018 IPR001623 DnaJ domain DY252_14750 84549f2c5a727441c0ffedbf08eb3d87 206 Pfam PF00226 DnaJ domain 45 107 2.2E-7 T 31-10-2018 IPR001623 DnaJ domain DY252_14750 84549f2c5a727441c0ffedbf08eb3d87 206 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 38 204 18.049 T 31-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DY252_14750 84549f2c5a727441c0ffedbf08eb3d87 206 SUPERFAMILY SSF47144 119 203 2.88E-19 T 31-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DY252_06185 f41b0770b1b9846639ec6209bc81eac7 391 Gene3D G3DSA:3.40.190.10 92 216 2.4E-132 T 31-10-2018 DY252_06185 f41b0770b1b9846639ec6209bc81eac7 391 SUPERFAMILY SSF53850 4 252 8.22E-20 T 31-10-2018 DY252_06185 f41b0770b1b9846639ec6209bc81eac7 391 Gene3D G3DSA:3.40.190.10 5 365 2.4E-132 T 31-10-2018 DY252_06185 f41b0770b1b9846639ec6209bc81eac7 391 Pfam PF13379 NMT1-like family 4 264 6.2E-74 T 31-10-2018 DY252_01490 9ef88bc2223f1dfa521a7f0d05b42af2 231 ProDom PD111165 RP434 82 219 0.003 T 31-10-2018 DY252_01490 9ef88bc2223f1dfa521a7f0d05b42af2 231 PIRSF PIRSF031890 2 226 3.9E-73 T 31-10-2018 IPR016985 Uncharacterised conserved protein UCP031890, Tim44-related DY252_01490 9ef88bc2223f1dfa521a7f0d05b42af2 231 Gene3D G3DSA:3.10.450.240 75 228 3.3E-39 T 31-10-2018 DY252_01490 9ef88bc2223f1dfa521a7f0d05b42af2 231 SMART SM00978 78 224 4.5E-46 T 31-10-2018 IPR007379 Tim44-like domain DY252_01490 9ef88bc2223f1dfa521a7f0d05b42af2 231 Pfam PF04280 Tim44-like domain 81 223 3.8E-47 T 31-10-2018 IPR007379 Tim44-like domain DY252_01490 9ef88bc2223f1dfa521a7f0d05b42af2 231 SUPERFAMILY SSF54427 75 224 6.57E-48 T 31-10-2018 IPR032710 NTF2-like domain superfamily DY252_15175 e6452882ab0acb6efdd77740ba8d1508 588 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 158 5.9E-13 T 31-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DY252_15175 e6452882ab0acb6efdd77740ba8d1508 588 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 466 583 9.6E-15 T 31-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain DY252_15175 e6452882ab0acb6efdd77740ba8d1508 588 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 2.3E-16 T 31-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DY252_15175 e6452882ab0acb6efdd77740ba8d1508 588 SUPERFAMILY SSF56645 39 274 9.04E-59 T 31-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DY252_15175 e6452882ab0acb6efdd77740ba8d1508 588 Gene3D G3DSA:2.40.110.10 161 284 2.9E-98 T 31-10-2018 DY252_15175 e6452882ab0acb6efdd77740ba8d1508 588 Gene3D G3DSA:1.10.540.10 43 160 2.9E-98 T 31-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DY252_15175 e6452882ab0acb6efdd77740ba8d1508 588 SUPERFAMILY SSF47203 290 459 7.41E-42 T 31-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DY252_15175 e6452882ab0acb6efdd77740ba8d1508 588 Gene3D G3DSA:1.20.140.10 285 451 2.9E-98 T 31-10-2018 DY252_15175 e6452882ab0acb6efdd77740ba8d1508 588 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 33 3.2E-5 T 31-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria DY252_15175 e6452882ab0acb6efdd77740ba8d1508 588 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 452 9.7E-22 T 31-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DY252_15110 9fc71c953f74e66c5b8684c14428bbe8 169 Pfam PF13523 Acetyltransferase (GNAT) domain 14 150 6.4E-27 T 31-10-2018 DY252_15110 9fc71c953f74e66c5b8684c14428bbe8 169 SUPERFAMILY SSF55729 5 162 1.73E-34 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_15110 9fc71c953f74e66c5b8684c14428bbe8 169 SMART SM01006 9 56 7.2E-4 T 31-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain DY252_15110 9fc71c953f74e66c5b8684c14428bbe8 169 Gene3D G3DSA:3.40.630.30 2 165 3.1E-35 T 31-10-2018 DY252_00765 ca2a40d6b25d1aee25bcd71f6ca8ad41 447 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 258 446 2.2E-34 T 31-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 DY252_00765 ca2a40d6b25d1aee25bcd71f6ca8ad41 447 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 192 2.7E-16 T 31-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DY252_00765 ca2a40d6b25d1aee25bcd71f6ca8ad41 447 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 8 445 4.2E-98 T 31-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 DY252_00765 ca2a40d6b25d1aee25bcd71f6ca8ad41 447 Gene3D G3DSA:3.40.50.880 266 443 1.4E-6 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_00765 ca2a40d6b25d1aee25bcd71f6ca8ad41 447 SUPERFAMILY SSF52540 7 200 1.59E-41 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_00765 ca2a40d6b25d1aee25bcd71f6ca8ad41 447 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 5 447 39.7 T 31-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 DY252_00765 ca2a40d6b25d1aee25bcd71f6ca8ad41 447 SUPERFAMILY SSF52317 258 445 6.64E-26 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_00765 ca2a40d6b25d1aee25bcd71f6ca8ad41 447 Gene3D G3DSA:3.40.50.300 7 188 1.3E-27 T 31-10-2018 DY252_04820 7e023f9bab8af1e5f97cd0262a4ef6c1 263 SUPERFAMILY SSF53335 5 227 8.29E-38 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_04820 7e023f9bab8af1e5f97cd0262a4ef6c1 263 Gene3D G3DSA:3.40.50.150 1 240 2.5E-35 T 31-10-2018 DY252_04820 7e023f9bab8af1e5f97cd0262a4ef6c1 263 Pfam PF08241 Methyltransferase domain 37 130 1.1E-22 T 31-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DY252_01110 296e819e207e4f10bf1c24f3081efaa7 313 Pfam PF03471 Transporter associated domain 213 293 1.6E-18 T 31-10-2018 IPR005170 Transporter-associated domain DY252_01110 296e819e207e4f10bf1c24f3081efaa7 313 SMART SM00116 86 135 7.2E-4 T 31-10-2018 IPR000644 CBS domain DY252_01110 296e819e207e4f10bf1c24f3081efaa7 313 SMART SM00116 148 196 34.0 T 31-10-2018 IPR000644 CBS domain DY252_01110 296e819e207e4f10bf1c24f3081efaa7 313 Gene3D G3DSA:3.10.580.10 58 210 2.7E-51 T 31-10-2018 DY252_01110 296e819e207e4f10bf1c24f3081efaa7 313 Gene3D G3DSA:3.30.465.10 211 295 1.8E-25 T 31-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DY252_01110 296e819e207e4f10bf1c24f3081efaa7 313 Pfam PF00571 CBS domain 78 132 2.0E-6 T 31-10-2018 IPR000644 CBS domain DY252_01110 296e819e207e4f10bf1c24f3081efaa7 313 Pfam PF00571 CBS domain 147 196 1.7E-4 T 31-10-2018 IPR000644 CBS domain DY252_01110 296e819e207e4f10bf1c24f3081efaa7 313 SMART SM01091 212 295 5.5E-25 T 31-10-2018 IPR005170 Transporter-associated domain DY252_01110 296e819e207e4f10bf1c24f3081efaa7 313 SUPERFAMILY SSF54631 72 206 4.3E-31 T 31-10-2018 DY252_01110 296e819e207e4f10bf1c24f3081efaa7 313 SUPERFAMILY SSF56176 211 300 3.0E-20 T 31-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DY252_03210 e5b37dcbaf69f2c8ddf52190713088ec 303 SUPERFAMILY SSF46785 3 88 4.99E-21 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_03210 e5b37dcbaf69f2c8ddf52190713088ec 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.8E-17 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_03210 e5b37dcbaf69f2c8ddf52190713088ec 303 Pfam PF03466 LysR substrate binding domain 89 295 3.2E-46 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_03210 e5b37dcbaf69f2c8ddf52190713088ec 303 Gene3D G3DSA:1.10.10.10 3 90 1.6E-27 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_03210 e5b37dcbaf69f2c8ddf52190713088ec 303 Gene3D G3DSA:3.40.190.10 163 266 3.4E-69 T 31-10-2018 DY252_03210 e5b37dcbaf69f2c8ddf52190713088ec 303 Gene3D G3DSA:3.40.190.10 91 292 3.4E-69 T 31-10-2018 DY252_03210 e5b37dcbaf69f2c8ddf52190713088ec 303 SUPERFAMILY SSF53850 91 299 2.95E-47 T 31-10-2018 DY252_08300 7651e8be1834d1127c19f4043bb7b759 174 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 19 41 - T 31-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 DY252_08300 7651e8be1834d1127c19f4043bb7b759 174 SUPERFAMILY SSF53597 10 171 1.96E-49 T 31-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DY252_08300 7651e8be1834d1127c19f4043bb7b759 174 Gene3D G3DSA:3.40.430.10 8 174 2.4E-49 T 31-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DY252_08300 7651e8be1834d1127c19f4043bb7b759 174 Pfam PF00186 Dihydrofolate reductase 10 171 2.0E-49 T 31-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 DY252_08300 7651e8be1834d1127c19f4043bb7b759 174 PIRSF PIRSF000194 2 174 1.0E-54 T 31-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 DY252_08300 7651e8be1834d1127c19f4043bb7b759 174 PRINTS PR00070 Dihydrofolate reductase signature 46 57 1.1E-10 T 31-10-2018 DY252_08300 7651e8be1834d1127c19f4043bb7b759 174 PRINTS PR00070 Dihydrofolate reductase signature 19 29 1.1E-10 T 31-10-2018 DY252_08300 7651e8be1834d1127c19f4043bb7b759 174 PRINTS PR00070 Dihydrofolate reductase signature 33 41 1.1E-10 T 31-10-2018 DY252_08300 7651e8be1834d1127c19f4043bb7b759 174 PRINTS PR00070 Dihydrofolate reductase signature 105 119 1.1E-10 T 31-10-2018 DY252_08045 21a6effecc325227ed846fef3cb66e3d 228 Gene3D G3DSA:2.160.20.60 29 205 9.7E-17 T 31-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 DY252_08045 21a6effecc325227ed846fef3cb66e3d 228 Pfam PF01493 GXGXG motif 38 189 8.3E-15 T 31-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 DY252_08045 21a6effecc325227ed846fef3cb66e3d 228 PIRSF PIRSF006519 1 228 6.4E-82 T 31-10-2018 IPR012061 Glutamate synthase, large subunit domain 3 stand-alone protein DY252_08045 21a6effecc325227ed846fef3cb66e3d 228 SUPERFAMILY SSF69336 5 197 3.66E-44 T 31-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 DY252_02010 bbf728d8872d9971c6f1bcac6446ef7e 190 SUPERFAMILY SSF53474 8 178 1.01E-22 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_02010 bbf728d8872d9971c6f1bcac6446ef7e 190 Gene3D G3DSA:3.40.50.1820 5 187 2.4E-25 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_02010 bbf728d8872d9971c6f1bcac6446ef7e 190 Pfam PF06821 Serine hydrolase 46 175 2.4E-7 T 31-10-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 DY252_04610 e40852204347fcf977189ff0dab9402b 127 SMART SM00422 5 72 3.0E-20 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_04610 e40852204347fcf977189ff0dab9402b 127 Gene3D G3DSA:1.10.1660.10 1 126 1.4E-27 T 31-10-2018 DY252_04610 e40852204347fcf977189ff0dab9402b 127 Pfam PF13411 MerR HTH family regulatory protein 5 70 5.5E-18 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_04610 e40852204347fcf977189ff0dab9402b 127 SUPERFAMILY SSF46955 5 120 4.03E-27 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_03680 69828b8e7ba8ce68b56211354440decd 682 SUPERFAMILY SSF52242 520 674 3.92E-39 T 31-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 DY252_03680 69828b8e7ba8ce68b56211354440decd 682 SUPERFAMILY SSF51703 6 579 8.89E-133 T 31-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DY252_03680 69828b8e7ba8ce68b56211354440decd 682 Gene3D G3DSA:3.20.20.240 37 487 2.2E-144 T 31-10-2018 DY252_03680 69828b8e7ba8ce68b56211354440decd 682 Pfam PF01642 Methylmalonyl-CoA mutase 40 584 3.4E-119 T 31-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DY252_03680 69828b8e7ba8ce68b56211354440decd 682 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 368 393 - T 31-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DY252_03680 69828b8e7ba8ce68b56211354440decd 682 Gene3D G3DSA:3.40.50.280 542 678 2.3E-47 T 31-10-2018 DY252_10045 b82d6d5e79481b28ef506e1f2c624820 745 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 548 702 5.3E-31 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_10045 b82d6d5e79481b28ef506e1f2c624820 745 Gene3D G3DSA:1.20.1480.50 352 448 9.2E-8 T 31-10-2018 DY252_10045 b82d6d5e79481b28ef506e1f2c624820 745 Pfam PF00672 HAMP domain 391 436 1.3E-7 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_10045 b82d6d5e79481b28ef506e1f2c624820 745 SUPERFAMILY SSF58104 410 727 7.72E-62 T 31-10-2018 DY252_10045 b82d6d5e79481b28ef506e1f2c624820 745 Gene3D G3DSA:1.20.58.920 71 351 1.0E-7 T 31-10-2018 IPR038188 TorS, sensor domain superfamily DY252_10045 b82d6d5e79481b28ef506e1f2c624820 745 Gene3D G3DSA:1.10.287.950 449 743 7.2E-56 T 31-10-2018 DY252_10045 b82d6d5e79481b28ef506e1f2c624820 745 SMART SM00283 479 733 2.1E-42 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_10045 b82d6d5e79481b28ef506e1f2c624820 745 SMART SM00304 390 442 9.8E-6 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_10045 b82d6d5e79481b28ef506e1f2c624820 745 SMART SM00304 607 667 32.0 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_10045 b82d6d5e79481b28ef506e1f2c624820 745 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 606 635 1.4E-19 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_10045 b82d6d5e79481b28ef506e1f2c624820 745 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 654 683 1.4E-19 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_10045 b82d6d5e79481b28ef506e1f2c624820 745 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 500 529 1.4E-19 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_10045 b82d6d5e79481b28ef506e1f2c624820 745 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 577 604 1.4E-19 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_10045 b82d6d5e79481b28ef506e1f2c624820 745 Pfam PF12729 Four helix bundle sensory module for signal transduction 28 128 9.4E-7 T 31-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DY252_02870 331c2cbed2b2131f8b89a2ec6da8f1d6 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 160 341 6.0E-28 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_02870 331c2cbed2b2131f8b89a2ec6da8f1d6 343 SUPERFAMILY SSF161098 137 324 3.27E-21 T 31-10-2018 IPR035906 MetI-like superfamily DY252_02870 331c2cbed2b2131f8b89a2ec6da8f1d6 343 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 47 1.4E-5 T 31-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DY252_02870 331c2cbed2b2131f8b89a2ec6da8f1d6 343 Gene3D G3DSA:1.10.3720.10 131 342 6.1E-19 T 31-10-2018 IPR035906 MetI-like superfamily DY252_09695 16d239e57062ca95ee2cb074e92c4706 206 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 174 187 - T 31-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DY252_09695 16d239e57062ca95ee2cb074e92c4706 206 PIRSF PIRSF000190 2 206 2.2E-72 T 31-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DY252_09695 16d239e57062ca95ee2cb074e92c4706 206 SUPERFAMILY SSF50475 13 206 3.93E-64 T 31-10-2018 DY252_09695 16d239e57062ca95ee2cb074e92c4706 206 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 11 206 1.6E-73 T 31-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DY252_09695 16d239e57062ca95ee2cb074e92c4706 206 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 164 206 3.0E-16 T 31-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DY252_09695 16d239e57062ca95ee2cb074e92c4706 206 Gene3D G3DSA:2.30.110.10 2 206 1.4E-77 T 31-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DY252_09695 16d239e57062ca95ee2cb074e92c4706 206 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 35 111 6.5E-24 T 31-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DY252_09695 16d239e57062ca95ee2cb074e92c4706 206 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 3 206 38.051 T 31-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DY252_11700 72452ad0ffb27022fa457c7cb594a8ba 183 Gene3D G3DSA:3.40.50.360 4 180 4.1E-36 T 31-10-2018 IPR029039 Flavoprotein-like superfamily DY252_11700 72452ad0ffb27022fa457c7cb594a8ba 183 Pfam PF03358 NADPH-dependent FMN reductase 4 124 1.3E-26 T 31-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DY252_11700 72452ad0ffb27022fa457c7cb594a8ba 183 SUPERFAMILY SSF52218 5 170 6.37E-31 T 31-10-2018 IPR029039 Flavoprotein-like superfamily DY252_15275 08af549aee8156fa1d2e1ca47f8ea15a 373 SUPERFAMILY SSF50621 239 372 7.32E-45 T 31-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DY252_15275 08af549aee8156fa1d2e1ca47f8ea15a 373 PRINTS PR00992 Alanine racemase signature 353 366 3.0E-42 T 31-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DY252_15275 08af549aee8156fa1d2e1ca47f8ea15a 373 PRINTS PR00992 Alanine racemase signature 169 180 3.0E-42 T 31-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DY252_15275 08af549aee8156fa1d2e1ca47f8ea15a 373 PRINTS PR00992 Alanine racemase signature 278 293 3.0E-42 T 31-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DY252_15275 08af549aee8156fa1d2e1ca47f8ea15a 373 PRINTS PR00992 Alanine racemase signature 299 316 3.0E-42 T 31-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DY252_15275 08af549aee8156fa1d2e1ca47f8ea15a 373 PRINTS PR00992 Alanine racemase signature 36 52 3.0E-42 T 31-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DY252_15275 08af549aee8156fa1d2e1ca47f8ea15a 373 PRINTS PR00992 Alanine racemase signature 261 276 3.0E-42 T 31-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DY252_15275 08af549aee8156fa1d2e1ca47f8ea15a 373 PRINTS PR00992 Alanine racemase signature 207 234 3.0E-42 T 31-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DY252_15275 08af549aee8156fa1d2e1ca47f8ea15a 373 PRINTS PR00992 Alanine racemase signature 134 146 3.0E-42 T 31-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DY252_15275 08af549aee8156fa1d2e1ca47f8ea15a 373 SUPERFAMILY SSF51419 18 239 1.6E-52 T 31-10-2018 IPR029066 PLP-binding barrel DY252_15275 08af549aee8156fa1d2e1ca47f8ea15a 373 Pfam PF00842 Alanine racemase, C-terminal domain 245 370 1.0E-39 T 31-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DY252_15275 08af549aee8156fa1d2e1ca47f8ea15a 373 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 41 51 - T 31-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DY252_15275 08af549aee8156fa1d2e1ca47f8ea15a 373 Gene3D G3DSA:3.20.20.10 20 232 4.1E-109 T 31-10-2018 IPR029066 PLP-binding barrel DY252_15275 08af549aee8156fa1d2e1ca47f8ea15a 373 Gene3D G3DSA:2.40.37.10 19 370 4.1E-109 T 31-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DY252_15275 08af549aee8156fa1d2e1ca47f8ea15a 373 Hamap MF_01201 Alanine racemase. 11 371 28.165 T 31-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DY252_15275 08af549aee8156fa1d2e1ca47f8ea15a 373 SMART SM01005 245 371 2.1E-60 T 31-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DY252_15275 08af549aee8156fa1d2e1ca47f8ea15a 373 Pfam PF01168 Alanine racemase, N-terminal domain 18 234 1.1E-45 T 31-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DY252_15275 08af549aee8156fa1d2e1ca47f8ea15a 373 TIGRFAM TIGR00492 alr: alanine racemase 16 371 8.6E-71 T 31-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DY252_13780 00d6b319c78b10d7988ec40720c32d92 314 SUPERFAMILY SSF46785 5 90 1.48E-19 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_13780 00d6b319c78b10d7988ec40720c32d92 314 SUPERFAMILY SSF53850 96 305 2.95E-36 T 31-10-2018 DY252_13780 00d6b319c78b10d7988ec40720c32d92 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.6E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_13780 00d6b319c78b10d7988ec40720c32d92 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.6E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_13780 00d6b319c78b10d7988ec40720c32d92 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.6E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_13780 00d6b319c78b10d7988ec40720c32d92 314 Pfam PF03466 LysR substrate binding domain 96 303 2.0E-30 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_13780 00d6b319c78b10d7988ec40720c32d92 314 Gene3D G3DSA:1.10.10.10 1 90 3.5E-19 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_13780 00d6b319c78b10d7988ec40720c32d92 314 Gene3D G3DSA:3.40.190.290 101 306 5.3E-24 T 31-10-2018 DY252_13780 00d6b319c78b10d7988ec40720c32d92 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 5.4E-17 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_04330 16e2454207bf7c1cc7a2f8e9971393d1 121 Pfam PF06170 Protein of unknown function (DUF983) 28 112 2.0E-35 T 31-10-2018 IPR009325 Protein of unknown function DUF983 DY252_06200 42c77ce96dcb0724dfa58f2332420f49 292 Gene3D G3DSA:1.10.10.10 8 97 5.7E-21 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_06200 42c77ce96dcb0724dfa58f2332420f49 292 SUPERFAMILY SSF53850 98 291 1.24E-26 T 31-10-2018 DY252_06200 42c77ce96dcb0724dfa58f2332420f49 292 Gene3D G3DSA:3.40.190.10 107 288 1.5E-31 T 31-10-2018 DY252_06200 42c77ce96dcb0724dfa58f2332420f49 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.6E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_06200 42c77ce96dcb0724dfa58f2332420f49 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.6E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_06200 42c77ce96dcb0724dfa58f2332420f49 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.6E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_06200 42c77ce96dcb0724dfa58f2332420f49 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 9.1E-17 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_06200 42c77ce96dcb0724dfa58f2332420f49 292 Gene3D G3DSA:3.40.190.10 163 263 1.5E-31 T 31-10-2018 DY252_06200 42c77ce96dcb0724dfa58f2332420f49 292 Pfam PF03466 LysR substrate binding domain 98 290 3.9E-23 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_06200 42c77ce96dcb0724dfa58f2332420f49 292 SUPERFAMILY SSF46785 8 85 3.42E-18 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_14770 7ea566733c76b9bc6e4cb88594239ed4 375 Gene3D G3DSA:1.10.260.50 16 270 7.1E-118 T 31-10-2018 DY252_14770 7ea566733c76b9bc6e4cb88594239ed4 375 Pfam PF00266 Aminotransferase class-V 5 355 2.2E-60 T 31-10-2018 IPR000192 Aminotransferase class V domain DY252_14770 7ea566733c76b9bc6e4cb88594239ed4 375 Gene3D G3DSA:3.90.1150.10 5 357 7.1E-118 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_14770 7ea566733c76b9bc6e4cb88594239ed4 375 SUPERFAMILY SSF53383 4 360 2.13E-86 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_14770 7ea566733c76b9bc6e4cb88594239ed4 375 PIRSF PIRSF005572 2 370 5.9E-123 T 31-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DY252_14770 7ea566733c76b9bc6e4cb88594239ed4 375 Gene3D G3DSA:3.40.640.10 61 227 7.1E-118 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_14770 7ea566733c76b9bc6e4cb88594239ed4 375 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 185 204 - T 31-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DY252_12420 6a74f9c52fd10b0baec353487c02881d 366 Gene3D G3DSA:2.60.410.10 256 345 2.9E-19 T 31-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DY252_12420 6a74f9c52fd10b0baec353487c02881d 366 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 8 233 2.3E-65 T 31-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DY252_12420 6a74f9c52fd10b0baec353487c02881d 366 Gene3D G3DSA:3.40.710.10 2 255 3.1E-80 T 31-10-2018 DY252_12420 6a74f9c52fd10b0baec353487c02881d 366 SUPERFAMILY SSF69189 256 348 2.94E-19 T 31-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DY252_12420 6a74f9c52fd10b0baec353487c02881d 366 SMART SM00936 256 346 6.5E-23 T 31-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DY252_12420 6a74f9c52fd10b0baec353487c02881d 366 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 256 345 2.8E-16 T 31-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DY252_12420 6a74f9c52fd10b0baec353487c02881d 366 SUPERFAMILY SSF56601 3 256 9.61E-77 T 31-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DY252_12420 6a74f9c52fd10b0baec353487c02881d 366 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 43 54 4.4E-14 T 31-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DY252_12420 6a74f9c52fd10b0baec353487c02881d 366 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 96 113 4.4E-14 T 31-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DY252_12420 6a74f9c52fd10b0baec353487c02881d 366 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 136 4.4E-14 T 31-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DY252_12540 789329dde7e35389f4c26ce580fe6d58 301 Gene3D G3DSA:2.120.10.30 2 295 1.1E-104 T 31-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DY252_12540 789329dde7e35389f4c26ce580fe6d58 301 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 32 49 2.4E-6 T 31-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DY252_12540 789329dde7e35389f4c26ce580fe6d58 301 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 162 184 2.4E-6 T 31-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DY252_12540 789329dde7e35389f4c26ce580fe6d58 301 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 229 246 2.4E-6 T 31-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DY252_12540 789329dde7e35389f4c26ce580fe6d58 301 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 31 286 5.9E-55 T 31-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region DY252_12540 789329dde7e35389f4c26ce580fe6d58 301 SUPERFAMILY SSF63829 5 295 1.77E-58 T 31-10-2018 DY252_08610 ce86095943de0ad54519c3bc3a9502d7 220 SUPERFAMILY SSF161098 14 208 1.27E-37 T 31-10-2018 IPR035906 MetI-like superfamily DY252_08610 ce86095943de0ad54519c3bc3a9502d7 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 1.7E-27 T 31-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DY252_08610 ce86095943de0ad54519c3bc3a9502d7 220 Gene3D G3DSA:1.10.3720.10 3 217 1.6E-48 T 31-10-2018 IPR035906 MetI-like superfamily DY252_08610 ce86095943de0ad54519c3bc3a9502d7 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 216 6.8E-18 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_12255 1b3786fc0d8efc1c52e7762c6e7912c1 382 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 4 376 6.9E-101 T 31-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 DY252_12255 1b3786fc0d8efc1c52e7762c6e7912c1 382 Gene3D G3DSA:3.20.20.140 57 344 1.4E-129 T 31-10-2018 DY252_12255 1b3786fc0d8efc1c52e7762c6e7912c1 382 Gene3D G3DSA:2.30.40.10 8 376 1.4E-129 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_12255 1b3786fc0d8efc1c52e7762c6e7912c1 382 SUPERFAMILY SSF51556 56 350 1.46E-99 T 31-10-2018 IPR032466 Metal-dependent hydrolase DY252_12255 1b3786fc0d8efc1c52e7762c6e7912c1 382 SUPERFAMILY SSF51338 2 371 9.21E-16 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_12255 1b3786fc0d8efc1c52e7762c6e7912c1 382 PIRSF PIRSF038994 3 381 2.7E-115 T 31-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 DY252_12255 1b3786fc0d8efc1c52e7762c6e7912c1 382 Pfam PF01979 Amidohydrolase family 53 377 9.9E-27 T 31-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DY252_13235 cca43416a40675d6c163baf65d6eef56 499 Pfam PF04715 Anthranilate synthase component I, N terminal region 29 173 1.7E-30 T 31-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DY252_13235 cca43416a40675d6c163baf65d6eef56 499 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 29 491 6.9E-168 T 31-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DY252_13235 cca43416a40675d6c163baf65d6eef56 499 Pfam PF00425 chorismate binding enzyme 231 484 4.3E-96 T 31-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DY252_13235 cca43416a40675d6c163baf65d6eef56 499 SUPERFAMILY SSF56322 21 491 1.44E-149 T 31-10-2018 IPR005801 ADC synthase GO:0009058 DY252_13235 cca43416a40675d6c163baf65d6eef56 499 PRINTS PR00095 Anthranilate synthase component I signature 331 344 2.0E-22 T 31-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DY252_13235 cca43416a40675d6c163baf65d6eef56 499 PRINTS PR00095 Anthranilate synthase component I signature 441 455 2.0E-22 T 31-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DY252_13235 cca43416a40675d6c163baf65d6eef56 499 PRINTS PR00095 Anthranilate synthase component I signature 345 358 2.0E-22 T 31-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DY252_13235 cca43416a40675d6c163baf65d6eef56 499 PRINTS PR00095 Anthranilate synthase component I signature 426 440 2.0E-22 T 31-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DY252_13235 cca43416a40675d6c163baf65d6eef56 499 Gene3D G3DSA:3.60.120.10 1 499 7.3E-171 T 31-10-2018 IPR005801 ADC synthase GO:0009058 DY252_17485 ccfc35186a509a4864179ea446ac9c44 260 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 62 258 2.4E-88 T 31-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DY252_17485 ccfc35186a509a4864179ea446ac9c44 260 Pfam PF00813 FliP family 62 254 1.3E-79 T 31-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DY252_17485 ccfc35186a509a4864179ea446ac9c44 260 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 60 79 5.3E-66 T 31-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DY252_17485 ccfc35186a509a4864179ea446ac9c44 260 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 187 207 5.3E-66 T 31-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DY252_17485 ccfc35186a509a4864179ea446ac9c44 260 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 79 99 5.3E-66 T 31-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DY252_17485 ccfc35186a509a4864179ea446ac9c44 260 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 208 229 5.3E-66 T 31-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DY252_17485 ccfc35186a509a4864179ea446ac9c44 260 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 99 118 5.3E-66 T 31-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DY252_17485 ccfc35186a509a4864179ea446ac9c44 260 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 232 257 5.3E-66 T 31-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DY252_17485 ccfc35186a509a4864179ea446ac9c44 260 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 118 130 5.1E-25 T 31-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DY252_17485 ccfc35186a509a4864179ea446ac9c44 260 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 180 192 5.1E-25 T 31-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DY252_17485 ccfc35186a509a4864179ea446ac9c44 260 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 58 67 5.1E-25 T 31-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DY252_17485 ccfc35186a509a4864179ea446ac9c44 260 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 130 144 5.1E-25 T 31-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DY252_17485 ccfc35186a509a4864179ea446ac9c44 260 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 158 170 5.1E-25 T 31-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DY252_17485 ccfc35186a509a4864179ea446ac9c44 260 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 248 258 5.1E-25 T 31-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DY252_17485 ccfc35186a509a4864179ea446ac9c44 260 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 187 202 - T 31-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DY252_17485 ccfc35186a509a4864179ea446ac9c44 260 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 235 247 - T 31-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DY252_19500 fa51b1ba9a8486dec55b3503b0223d50 417 SUPERFAMILY SSF50952 76 414 1.44E-22 T 31-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 DY252_19500 fa51b1ba9a8486dec55b3503b0223d50 417 Gene3D G3DSA:2.120.10.30 77 413 3.3E-25 T 31-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DY252_19500 fa51b1ba9a8486dec55b3503b0223d50 417 Pfam PF07995 Glucose / Sorbosone dehydrogenase 175 342 8.1E-14 T 31-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase DY252_19965 4e10e050160369be7f154c7289c28eee 134 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 119 31.111 T 31-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_19965 4e10e050160369be7f154c7289c28eee 134 SUPERFAMILY SSF50104 2 120 2.01E-46 T 31-10-2018 IPR008991 Translation protein SH3-like domain superfamily DY252_19965 4e10e050160369be7f154c7289c28eee 134 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 118 7.7E-49 T 31-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_19965 4e10e050160369be7f154c7289c28eee 134 PRINTS PR00061 Ribosomal protein L19 signature 9 38 2.4E-36 T 31-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_19965 4e10e050160369be7f154c7289c28eee 134 PRINTS PR00061 Ribosomal protein L19 signature 93 118 2.4E-36 T 31-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_19965 4e10e050160369be7f154c7289c28eee 134 PRINTS PR00061 Ribosomal protein L19 signature 39 68 2.4E-36 T 31-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_19965 4e10e050160369be7f154c7289c28eee 134 Gene3D G3DSA:2.30.30.790 2 121 2.4E-18 T 31-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_19965 4e10e050160369be7f154c7289c28eee 134 PIRSF PIRSF002191 1 134 1.4E-53 T 31-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_19965 4e10e050160369be7f154c7289c28eee 134 Pfam PF01245 Ribosomal protein L19 3 117 8.4E-49 T 31-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_19965 4e10e050160369be7f154c7289c28eee 134 ProSitePatterns PS01015 Ribosomal protein L19 signature. 91 106 - T 31-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_09215 66e67df09cffdca68845f3c311e4dc06 104 PRINTS PR00112 Acylphosphatase signature 37 62 1.9E-6 T 31-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DY252_09215 66e67df09cffdca68845f3c311e4dc06 104 PRINTS PR00112 Acylphosphatase signature 16 31 1.9E-6 T 31-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DY252_09215 66e67df09cffdca68845f3c311e4dc06 104 ProSitePatterns PS00151 Acylphosphatase signature 2. 45 61 - T 31-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DY252_09215 66e67df09cffdca68845f3c311e4dc06 104 Pfam PF00708 Acylphosphatase 17 99 1.4E-21 T 31-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DY252_09215 66e67df09cffdca68845f3c311e4dc06 104 SUPERFAMILY SSF54975 15 100 1.07E-25 T 31-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DY252_09215 66e67df09cffdca68845f3c311e4dc06 104 Gene3D G3DSA:3.30.70.100 2 101 4.8E-28 T 31-10-2018 DY252_19080 c05a7ad2af63814227450bfbb6b1f1b8 220 Gene3D G3DSA:3.40.50.1820 3 217 2.6E-45 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_19080 c05a7ad2af63814227450bfbb6b1f1b8 220 SUPERFAMILY SSF53474 4 215 2.14E-35 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_19080 c05a7ad2af63814227450bfbb6b1f1b8 220 Pfam PF01738 Dienelactone hydrolase family 22 215 4.6E-38 T 31-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 DY252_16080 618d00072661d0fd6000e6942fce5b3a 300 SUPERFAMILY SSF46785 4 110 3.14E-19 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_16080 618d00072661d0fd6000e6942fce5b3a 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.2E-16 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_16080 618d00072661d0fd6000e6942fce5b3a 300 SUPERFAMILY SSF53850 88 295 9.41E-43 T 31-10-2018 DY252_16080 618d00072661d0fd6000e6942fce5b3a 300 Pfam PF03466 LysR substrate binding domain 87 291 3.8E-38 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_16080 618d00072661d0fd6000e6942fce5b3a 300 Gene3D G3DSA:3.40.190.290 89 292 3.8E-58 T 31-10-2018 DY252_16080 618d00072661d0fd6000e6942fce5b3a 300 Gene3D G3DSA:1.10.10.10 3 86 6.1E-24 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_19505 7d1660d12fc3a30400e3ec0fbfa510bc 203 Gene3D G3DSA:1.10.760.10 124 193 4.4E-20 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_19505 7d1660d12fc3a30400e3ec0fbfa510bc 203 Gene3D G3DSA:1.10.760.10 36 108 1.3E-18 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_19505 7d1660d12fc3a30400e3ec0fbfa510bc 203 SUPERFAMILY SSF46626 32 108 1.12E-15 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_19505 7d1660d12fc3a30400e3ec0fbfa510bc 203 SUPERFAMILY SSF46626 126 192 1.06E-16 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_19505 7d1660d12fc3a30400e3ec0fbfa510bc 203 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 127 189 2.4E-5 T 31-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_16200 4cfdb6d57da26bdcde0274afdb56cdd5 144 SUPERFAMILY SSF52402 4 144 2.18E-28 T 31-10-2018 DY252_16200 4cfdb6d57da26bdcde0274afdb56cdd5 144 Pfam PF00582 Universal stress protein family 5 144 7.5E-28 T 31-10-2018 IPR006016 UspA DY252_16200 4cfdb6d57da26bdcde0274afdb56cdd5 144 PRINTS PR01438 Universal stress protein signature 3 21 2.6E-10 T 31-10-2018 IPR006015 Universal stress protein A DY252_16200 4cfdb6d57da26bdcde0274afdb56cdd5 144 PRINTS PR01438 Universal stress protein signature 122 144 2.6E-10 T 31-10-2018 IPR006015 Universal stress protein A DY252_16200 4cfdb6d57da26bdcde0274afdb56cdd5 144 PRINTS PR01438 Universal stress protein signature 104 116 2.6E-10 T 31-10-2018 IPR006015 Universal stress protein A DY252_16200 4cfdb6d57da26bdcde0274afdb56cdd5 144 Gene3D G3DSA:3.40.50.620 4 144 6.8E-29 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_18155 fa3f45af3250bfac276ac539980b896a 317 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 30 312 3.9E-108 T 31-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 DY252_18155 fa3f45af3250bfac276ac539980b896a 317 Gene3D G3DSA:1.10.357.140 45 195 5.4E-42 T 31-10-2018 DY252_18155 fa3f45af3250bfac276ac539980b896a 317 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 92 114 - T 31-10-2018 IPR030470 UbiA prenyltransferase conserved site DY252_18155 fa3f45af3250bfac276ac539980b896a 317 Gene3D G3DSA:1.20.120.1780 196 316 1.3E-16 T 31-10-2018 DY252_18155 fa3f45af3250bfac276ac539980b896a 317 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 24 313 28.066 T 31-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 DY252_18155 fa3f45af3250bfac276ac539980b896a 317 Pfam PF01040 UbiA prenyltransferase family 48 294 4.4E-56 T 31-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DY252_12055 8b298bfe18658c7735b39e4652e77cf9 813 SUPERFAMILY SSF55785 20 115 6.63E-23 T 31-10-2018 IPR035965 PAS domain superfamily DY252_12055 8b298bfe18658c7735b39e4652e77cf9 813 Pfam PF12729 Four helix bundle sensory module for signal transduction 163 339 5.2E-8 T 31-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DY252_12055 8b298bfe18658c7735b39e4652e77cf9 813 Gene3D G3DSA:1.10.287.950 421 715 1.4E-56 T 31-10-2018 DY252_12055 8b298bfe18658c7735b39e4652e77cf9 813 Pfam PF08447 PAS fold 32 114 1.5E-12 T 31-10-2018 IPR013655 PAS fold-3 GO:0005515 DY252_12055 8b298bfe18658c7735b39e4652e77cf9 813 Pfam PF07238 PilZ domain 715 777 1.7E-9 T 31-10-2018 IPR009875 PilZ domain GO:0035438 DY252_12055 8b298bfe18658c7735b39e4652e77cf9 813 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 114 3.6E-11 T 31-10-2018 IPR000014 PAS domain DY252_12055 8b298bfe18658c7735b39e4652e77cf9 813 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 580 609 2.1E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_12055 8b298bfe18658c7735b39e4652e77cf9 813 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 551 578 2.1E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_12055 8b298bfe18658c7735b39e4652e77cf9 813 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 503 2.1E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_12055 8b298bfe18658c7735b39e4652e77cf9 813 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 162 187 2.1E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_12055 8b298bfe18658c7735b39e4652e77cf9 813 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 522 673 1.0E-29 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_12055 8b298bfe18658c7735b39e4652e77cf9 813 SMART SM00283 453 707 1.8E-44 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_12055 8b298bfe18658c7735b39e4652e77cf9 813 Gene3D G3DSA:2.40.10.220 716 784 1.0E-6 T 31-10-2018 DY252_12055 8b298bfe18658c7735b39e4652e77cf9 813 Gene3D G3DSA:3.30.450.20 13 137 3.7E-22 T 31-10-2018 DY252_12055 8b298bfe18658c7735b39e4652e77cf9 813 SUPERFAMILY SSF58104 448 700 2.53E-55 T 31-10-2018 DY252_12055 8b298bfe18658c7735b39e4652e77cf9 813 SMART SM00086 80 121 9.4E-4 T 31-10-2018 IPR001610 PAC motif DY252_12055 8b298bfe18658c7735b39e4652e77cf9 813 SUPERFAMILY SSF141371 714 770 6.28E-6 T 31-10-2018 DY252_15560 1c8f66eca32122a665e40b90a3c27641 448 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 437 5.8E-148 T 31-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 DY252_15560 1c8f66eca32122a665e40b90a3c27641 448 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 4 436 37.506 T 31-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 DY252_15560 1c8f66eca32122a665e40b90a3c27641 448 SUPERFAMILY SSF51161 252 420 2.26E-46 T 31-10-2018 IPR011004 Trimeric LpxA-like superfamily DY252_15560 1c8f66eca32122a665e40b90a3c27641 448 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 387 415 - T 31-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DY252_15560 1c8f66eca32122a665e40b90a3c27641 448 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 301 336 3.6E-6 T 31-10-2018 IPR001451 Hexapeptide repeat DY252_15560 1c8f66eca32122a665e40b90a3c27641 448 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 379 413 1.9E-8 T 31-10-2018 IPR001451 Hexapeptide repeat DY252_15560 1c8f66eca32122a665e40b90a3c27641 448 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 266 298 2.9E-8 T 31-10-2018 IPR001451 Hexapeptide repeat DY252_15560 1c8f66eca32122a665e40b90a3c27641 448 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 310 338 - T 31-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DY252_15560 1c8f66eca32122a665e40b90a3c27641 448 Pfam PF12804 MobA-like NTP transferase domain 7 143 3.9E-21 T 31-10-2018 IPR025877 MobA-like NTP transferase DY252_15560 1c8f66eca32122a665e40b90a3c27641 448 Gene3D G3DSA:2.160.10.10 229 440 4.3E-56 T 31-10-2018 DY252_15560 1c8f66eca32122a665e40b90a3c27641 448 SUPERFAMILY SSF53448 5 251 1.0E-55 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_15560 1c8f66eca32122a665e40b90a3c27641 448 Gene3D G3DSA:3.90.550.10 3 228 2.5E-57 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_20790 2e06c61dfd5a8cf53a9fc033652e8bff 340 Pfam PF01548 Transposase 7 146 2.9E-15 T 31-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DY252_20790 2e06c61dfd5a8cf53a9fc033652e8bff 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 287 5.0E-25 T 31-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DY252_15215 6f87fb71a25cdd6ccdbc7e4aaa973d26 294 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 3 294 2.7E-72 T 31-10-2018 IPR005229 Conserved hypothetical protein CHP00255 DY252_15215 6f87fb71a25cdd6ccdbc7e4aaa973d26 294 Pfam PF03755 YicC-like family, N-terminal region 3 157 3.3E-35 T 31-10-2018 IPR013527 YicC-like, N-terminal DY252_15215 6f87fb71a25cdd6ccdbc7e4aaa973d26 294 Pfam PF08340 Domain of unknown function (DUF1732) 210 294 9.3E-35 T 31-10-2018 IPR013551 Domain of unknown function DUF1732 DY252_03265 3c84bf1426f3e10c911d4f1e845bd82e 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 32.391 T 31-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_03265 3c84bf1426f3e10c911d4f1e845bd82e 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 101 9.1E-47 T 31-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_03265 3c84bf1426f3e10c911d4f1e845bd82e 101 Pfam PF00699 Urease beta subunit 3 100 1.2E-45 T 31-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_03265 3c84bf1426f3e10c911d4f1e845bd82e 101 Gene3D G3DSA:2.10.150.10 1 101 1.2E-48 T 31-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_03265 3c84bf1426f3e10c911d4f1e845bd82e 101 SUPERFAMILY SSF51278 1 101 4.58E-48 T 31-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_18010 5abb7bdef9b5a1a8d2ac69633db1b31b 471 Gene3D G3DSA:1.10.3210.10 35 256 6.5E-133 T 31-10-2018 DY252_18010 5abb7bdef9b5a1a8d2ac69633db1b31b 471 Gene3D G3DSA:1.10.3410.10 257 378 6.5E-133 T 31-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 DY252_18010 5abb7bdef9b5a1a8d2ac69633db1b31b 471 SUPERFAMILY SSF109604 31 466 4.32E-66 T 31-10-2018 DY252_18010 5abb7bdef9b5a1a8d2ac69633db1b31b 471 Pfam PF01966 HD domain 70 136 2.7E-5 T 31-10-2018 IPR006674 HD domain DY252_18010 5abb7bdef9b5a1a8d2ac69633db1b31b 471 Gene3D G3DSA:1.10.3550.10 123 459 6.5E-133 T 31-10-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal DY252_18010 5abb7bdef9b5a1a8d2ac69633db1b31b 471 Pfam PF13286 Phosphohydrolase-associated domain 368 464 9.3E-9 T 31-10-2018 IPR026875 Phosphohydrolase-associated domain DY252_18010 5abb7bdef9b5a1a8d2ac69633db1b31b 471 SMART SM00471 66 273 4.7E-6 T 31-10-2018 IPR003607 HD/PDEase domain DY252_18010 5abb7bdef9b5a1a8d2ac69633db1b31b 471 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 33 467 8.8E-108 T 31-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 DY252_14990 9f162267e49cd52398fb0d9c640f833a 440 SUPERFAMILY SSF48179 201 293 2.55E-33 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_14990 9f162267e49cd52398fb0d9c640f833a 440 SUPERFAMILY SSF51735 1 188 2.88E-56 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_14990 9f162267e49cd52398fb0d9c640f833a 440 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 318 418 7.7E-35 T 31-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DY252_14990 9f162267e49cd52398fb0d9c640f833a 440 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 414 3.1E-143 T 31-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DY252_14990 9f162267e49cd52398fb0d9c640f833a 440 PIRSF PIRSF500134 1 436 1.3E-188 T 31-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 DY252_14990 9f162267e49cd52398fb0d9c640f833a 440 PIRSF PIRSF000124 1 433 6.3E-148 T 31-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DY252_14990 9f162267e49cd52398fb0d9c640f833a 440 Gene3D G3DSA:1.20.5.100 200 231 5.2E-18 T 31-10-2018 DY252_14990 9f162267e49cd52398fb0d9c640f833a 440 Gene3D G3DSA:3.40.50.720 1 199 2.3E-82 T 31-10-2018 DY252_14990 9f162267e49cd52398fb0d9c640f833a 440 Gene3D G3DSA:3.40.50.720 232 439 1.3E-80 T 31-10-2018 DY252_14990 9f162267e49cd52398fb0d9c640f833a 440 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 201 293 1.4E-38 T 31-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DY252_14990 9f162267e49cd52398fb0d9c640f833a 440 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 183 1.7E-66 T 31-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DY252_14990 9f162267e49cd52398fb0d9c640f833a 440 SMART SM00984 317 418 5.2E-53 T 31-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DY252_14990 9f162267e49cd52398fb0d9c640f833a 440 SUPERFAMILY SSF52413 303 428 2.62E-41 T 31-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 DY252_16210 c27d8b9e9bec90313a7876a9b9abb95e 548 ProSitePatterns PS01276 Peptidase family U32 signature. 165 183 - T 31-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DY252_16210 c27d8b9e9bec90313a7876a9b9abb95e 548 Pfam PF01136 Peptidase family U32 78 333 5.9E-85 T 31-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DY252_16210 c27d8b9e9bec90313a7876a9b9abb95e 548 Pfam PF16325 Peptidase family U32 C-terminal domain 350 422 2.3E-6 T 31-10-2018 IPR032525 Peptidase family U32, C-terminal DY252_14185 479e4b86c77258e5483aa27b3c70adb3 325 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 305 1.9E-46 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_16175 d46a092455375e304502b0186fe23a2a 645 Pfam PF00005 ABC transporter 345 502 7.1E-25 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_16175 d46a092455375e304502b0186fe23a2a 645 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_16175 d46a092455375e304502b0186fe23a2a 645 Gene3D G3DSA:1.10.3720.10 84 289 3.9E-18 T 31-10-2018 IPR035906 MetI-like superfamily DY252_16175 d46a092455375e304502b0186fe23a2a 645 SUPERFAMILY SSF161098 88 275 1.96E-26 T 31-10-2018 IPR035906 MetI-like superfamily DY252_16175 d46a092455375e304502b0186fe23a2a 645 SMART SM00382 352 560 8.2E-16 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_16175 d46a092455375e304502b0186fe23a2a 645 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 294 5.5E-28 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_16175 d46a092455375e304502b0186fe23a2a 645 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 552 637 1.3E-24 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_16175 d46a092455375e304502b0186fe23a2a 645 Gene3D G3DSA:3.40.50.300 321 644 6.4E-93 T 31-10-2018 DY252_16175 d46a092455375e304502b0186fe23a2a 645 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 554 618 6.5E-19 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_16175 d46a092455375e304502b0186fe23a2a 645 SUPERFAMILY SSF52540 324 574 1.04E-65 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18130 b822325b0270f6c5717c371449f7076b 268 SUPERFAMILY SSF161098 73 257 2.35E-33 T 31-10-2018 IPR035906 MetI-like superfamily DY252_18130 b822325b0270f6c5717c371449f7076b 268 Gene3D G3DSA:1.10.3720.10 70 267 1.3E-30 T 31-10-2018 IPR035906 MetI-like superfamily DY252_18130 b822325b0270f6c5717c371449f7076b 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 263 1.3E-16 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_18130 b822325b0270f6c5717c371449f7076b 268 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 24 267 2.8E-78 T 31-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 DY252_18210 9a7326f48f8f42f485942229d15e7d45 305 SUPERFAMILY SSF56300 8 233 4.43E-32 T 31-10-2018 DY252_18210 9a7326f48f8f42f485942229d15e7d45 305 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 13 226 5.6E-12 T 31-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 DY252_18210 9a7326f48f8f42f485942229d15e7d45 305 Gene3D G3DSA:3.60.21.10 10 247 2.3E-17 T 31-10-2018 IPR029052 Metallo-dependent phosphatase-like DY252_18535 8d2b3452131cff64879e632599c8c20a 171 Pfam PF06347 Bacterial SH3 domain 44 99 1.7E-14 T 31-10-2018 IPR010466 Protein of unknown function DUF1058 DY252_18535 8d2b3452131cff64879e632599c8c20a 171 Pfam PF06347 Bacterial SH3 domain 107 162 1.5E-4 T 31-10-2018 IPR010466 Protein of unknown function DUF1058 DY252_18535 8d2b3452131cff64879e632599c8c20a 171 Gene3D G3DSA:2.30.30.40 43 98 1.8E-7 T 31-10-2018 DY252_19910 b2d7df49527bd67e6f5c16ee4cde0fbc 501 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 284 295 - T 31-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DY252_19910 b2d7df49527bd67e6f5c16ee4cde0fbc 501 Gene3D G3DSA:2.60.40.10 373 496 2.0E-21 T 31-10-2018 IPR013783 Immunoglobulin-like fold DY252_19910 b2d7df49527bd67e6f5c16ee4cde0fbc 501 SUPERFAMILY SSF54862 116 353 7.53E-28 T 31-10-2018 DY252_19910 b2d7df49527bd67e6f5c16ee4cde0fbc 501 Pfam PF12801 4Fe-4S binding domain 108 141 1.2E-9 T 31-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DY252_19910 b2d7df49527bd67e6f5c16ee4cde0fbc 501 Pfam PF13746 4Fe-4S dicluster domain 229 336 9.2E-43 T 31-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DY252_19910 b2d7df49527bd67e6f5c16ee4cde0fbc 501 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 372 497 5.8E-32 T 31-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain DY252_19910 b2d7df49527bd67e6f5c16ee4cde0fbc 501 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 46 493 1.5E-159 T 31-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 DY252_16370 0761e23c0a9f151e7ba6e5210d17b76f 223 SUPERFAMILY SSF46689 12 94 5.99E-16 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_16370 0761e23c0a9f151e7ba6e5210d17b76f 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 5.0E-11 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_16370 0761e23c0a9f151e7ba6e5210d17b76f 223 Gene3D G3DSA:1.10.357.10 9 210 9.1E-43 T 31-10-2018 DY252_16370 0761e23c0a9f151e7ba6e5210d17b76f 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 2.1E-5 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_16370 0761e23c0a9f151e7ba6e5210d17b76f 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 2.1E-5 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_06015 5d77409d8c29900fa0fa94d2810a3c75 327 Pfam PF13407 Periplasmic binding protein domain 27 304 1.9E-44 T 31-10-2018 IPR025997 Periplasmic binding protein DY252_06015 5d77409d8c29900fa0fa94d2810a3c75 327 Gene3D G3DSA:3.40.50.2300 133 318 4.9E-51 T 31-10-2018 DY252_06015 5d77409d8c29900fa0fa94d2810a3c75 327 SUPERFAMILY SSF53822 23 312 1.12E-40 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_06015 5d77409d8c29900fa0fa94d2810a3c75 327 Gene3D G3DSA:3.40.50.2300 31 312 4.9E-51 T 31-10-2018 DY252_00820 1a4c2b07ebaed78618ec5d363b8e9f0a 245 Pfam PF14497 Glutathione S-transferase, C-terminal domain 171 227 4.4E-7 T 31-10-2018 IPR004046 Glutathione S-transferase, C-terminal DY252_00820 1a4c2b07ebaed78618ec5d363b8e9f0a 245 Gene3D G3DSA:3.40.30.10 25 244 1.0E-87 T 31-10-2018 DY252_00820 1a4c2b07ebaed78618ec5d363b8e9f0a 245 Pfam PF13417 Glutathione S-transferase, N-terminal domain 25 100 1.4E-22 T 31-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DY252_00820 1a4c2b07ebaed78618ec5d363b8e9f0a 245 SUPERFAMILY SSF52833 23 124 1.23E-26 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_00820 1a4c2b07ebaed78618ec5d363b8e9f0a 245 Gene3D G3DSA:1.20.1050.10 101 219 1.0E-87 T 31-10-2018 DY252_00820 1a4c2b07ebaed78618ec5d363b8e9f0a 245 SUPERFAMILY SSF47616 91 235 2.27E-28 T 31-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DY252_14940 03228485abe3cf0a3cbf753472cca8f8 395 SUPERFAMILY SSF55729 191 363 6.89E-38 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_14940 03228485abe3cf0a3cbf753472cca8f8 395 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 20 390 3.4E-155 T 31-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition DY252_03390 031f62564a17d970e9fd26feff2f3697 828 Pfam PF00005 ABC transporter 358 504 4.4E-30 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_03390 031f62564a17d970e9fd26feff2f3697 828 SMART SM00382 366 559 4.3E-14 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_03390 031f62564a17d970e9fd26feff2f3697 828 SUPERFAMILY SSF90123 25 321 9.55E-39 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_03390 031f62564a17d970e9fd26feff2f3697 828 Gene3D G3DSA:3.40.50.300 336 570 8.6E-64 T 31-10-2018 DY252_03390 031f62564a17d970e9fd26feff2f3697 828 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 31 555 2.6E-157 T 31-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 DY252_03390 031f62564a17d970e9fd26feff2f3697 828 Pfam PF00664 ABC transporter transmembrane region 35 287 1.5E-6 T 31-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DY252_03390 031f62564a17d970e9fd26feff2f3697 828 SUPERFAMILY SSF52540 337 554 1.2E-55 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_03390 031f62564a17d970e9fd26feff2f3697 828 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_03390 031f62564a17d970e9fd26feff2f3697 828 Gene3D G3DSA:1.20.1560.10 24 326 5.9E-31 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_21655 436406dd85d18ea3e24aaa22e1747005 65 Gene3D G3DSA:1.10.1470.10 1 65 3.1E-30 T 31-10-2018 IPR036629 YjbJ superfamily DY252_21655 436406dd85d18ea3e24aaa22e1747005 65 SUPERFAMILY SSF69047 1 64 1.44E-24 T 31-10-2018 IPR036629 YjbJ superfamily DY252_21655 436406dd85d18ea3e24aaa22e1747005 65 PIRSF PIRSF039008 1 65 3.2E-31 T 31-10-2018 IPR026042 Stress response protein YjbJ DY252_21655 436406dd85d18ea3e24aaa22e1747005 65 Pfam PF05532 CsbD-like 4 55 1.9E-16 T 31-10-2018 IPR008462 CsbD-like domain DY252_17305 a7502aa0ef6d511cfb5f4619f5c8f5c2 243 SMART SM00849 34 222 9.2E-28 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_17305 a7502aa0ef6d511cfb5f4619f5c8f5c2 243 Pfam PF00753 Metallo-beta-lactamase superfamily 34 222 1.6E-15 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_17305 a7502aa0ef6d511cfb5f4619f5c8f5c2 243 SUPERFAMILY SSF56281 16 237 2.8E-40 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_17305 a7502aa0ef6d511cfb5f4619f5c8f5c2 243 Gene3D G3DSA:3.60.15.10 3 240 3.0E-39 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_19805 026275db18fb8e1f5e29c59db0c8a3c5 479 Pfam PF03315 Serine dehydratase beta chain 23 175 8.5E-57 T 31-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DY252_19805 026275db18fb8e1f5e29c59db0c8a3c5 479 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 23 474 1.8E-213 T 31-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DY252_19805 026275db18fb8e1f5e29c59db0c8a3c5 479 Gene3D G3DSA:3.30.1330.90 30 179 7.4E-56 T 31-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DY252_19805 026275db18fb8e1f5e29c59db0c8a3c5 479 Pfam PF03313 Serine dehydratase alpha chain 207 471 4.7E-103 T 31-10-2018 IPR005130 Serine dehydratase-like, alpha subunit DY252_19805 026275db18fb8e1f5e29c59db0c8a3c5 479 SUPERFAMILY SSF143548 36 177 2.62E-47 T 31-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DY252_11690 607bedd9e1dbc908a639c96d67f65aa4 492 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 482 92.353 T 31-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DY252_11690 607bedd9e1dbc908a639c96d67f65aa4 492 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 16 480 6.0E-176 T 31-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DY252_11690 607bedd9e1dbc908a639c96d67f65aa4 492 SUPERFAMILY SSF75304 3 485 1.57E-156 T 31-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DY252_11690 607bedd9e1dbc908a639c96d67f65aa4 492 ProSitePatterns PS00571 Amidases signature. 155 186 - T 31-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 DY252_11690 607bedd9e1dbc908a639c96d67f65aa4 492 Gene3D G3DSA:3.90.1300.10 3 489 6.6E-187 T 31-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DY252_11690 607bedd9e1dbc908a639c96d67f65aa4 492 Pfam PF01425 Amidase 25 471 1.1E-150 T 31-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DY252_10390 5ae9bd797e6ba4ab8ea40acf613b4379 92 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 42 2.6E-12 T 31-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 DY252_10390 5ae9bd797e6ba4ab8ea40acf613b4379 92 Gene3D G3DSA:1.10.1220.10 10 51 2.2E-8 T 31-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DY252_10390 5ae9bd797e6ba4ab8ea40acf613b4379 92 SUPERFAMILY SSF47598 4 44 2.67E-12 T 31-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 DY252_06225 6fc2f5efa56c8c5dcef83a9fa2488d22 417 Pfam PF01266 FAD dependent oxidoreductase 34 381 8.0E-61 T 31-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DY252_06225 6fc2f5efa56c8c5dcef83a9fa2488d22 417 Gene3D G3DSA:3.50.50.60 34 390 3.9E-107 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_06225 6fc2f5efa56c8c5dcef83a9fa2488d22 417 TIGRFAM TIGR01373 soxB: sarcosine oxidase, beta subunit family 4 409 2.6E-217 T 31-10-2018 IPR006278 Sarcosine oxidase subunit beta GO:0008115|GO:0046653|GO:0055114 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DY252_06225 6fc2f5efa56c8c5dcef83a9fa2488d22 417 Gene3D G3DSA:3.30.9.10 115 347 3.9E-107 T 31-10-2018 DY252_06225 6fc2f5efa56c8c5dcef83a9fa2488d22 417 SUPERFAMILY SSF51905 32 406 1.3E-52 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_11230 76b20744e8188fe7faf183958798dc20 301 Gene3D G3DSA:3.40.190.10 164 269 2.0E-60 T 31-10-2018 DY252_11230 76b20744e8188fe7faf183958798dc20 301 Gene3D G3DSA:3.40.190.10 88 287 2.0E-60 T 31-10-2018 DY252_11230 76b20744e8188fe7faf183958798dc20 301 Pfam PF03466 LysR substrate binding domain 88 289 7.0E-40 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_11230 76b20744e8188fe7faf183958798dc20 301 Gene3D G3DSA:1.10.10.10 1 87 6.8E-27 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_11230 76b20744e8188fe7faf183958798dc20 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.6E-22 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_11230 76b20744e8188fe7faf183958798dc20 301 SUPERFAMILY SSF46785 1 85 3.33E-22 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_11230 76b20744e8188fe7faf183958798dc20 301 SUPERFAMILY SSF53850 89 296 1.81E-34 T 31-10-2018 DY252_11230 76b20744e8188fe7faf183958798dc20 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.9E-9 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_11230 76b20744e8188fe7faf183958798dc20 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.9E-9 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_11230 76b20744e8188fe7faf183958798dc20 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.9E-9 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_18405 49603e567a2ce2056394f6e648d6e945 309 SUPERFAMILY SSF53633 18 308 4.97E-94 T 31-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DY252_18405 49603e567a2ce2056394f6e648d6e945 309 TIGRFAM TIGR00761 argB: acetylglutamate kinase 41 283 5.2E-76 T 31-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DY252_18405 49603e567a2ce2056394f6e648d6e945 309 PIRSF PIRSF000728 24 308 4.8E-110 T 31-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DY252_18405 49603e567a2ce2056394f6e648d6e945 309 Pfam PF00696 Amino acid kinase family 40 284 9.9E-43 T 31-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DY252_18405 49603e567a2ce2056394f6e648d6e945 309 PRINTS PR00474 Glutamate 5-kinase family signature 208 235 3.8E-7 T 31-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DY252_18405 49603e567a2ce2056394f6e648d6e945 309 PRINTS PR00474 Glutamate 5-kinase family signature 70 84 3.8E-7 T 31-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DY252_18405 49603e567a2ce2056394f6e648d6e945 309 PRINTS PR00474 Glutamate 5-kinase family signature 258 278 3.8E-7 T 31-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DY252_18405 49603e567a2ce2056394f6e648d6e945 309 Hamap MF_00082 Acetylglutamate kinase [argB]. 38 301 50.337 T 31-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DY252_18405 49603e567a2ce2056394f6e648d6e945 309 Gene3D G3DSA:3.40.1160.10 19 308 7.8E-95 T 31-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DY252_10685 23f8a6076370b9a0f9d9a97d77dffc7a 529 SUPERFAMILY SSF53850 26 525 1.05E-112 T 31-10-2018 DY252_10685 23f8a6076370b9a0f9d9a97d77dffc7a 529 PIRSF PIRSF002741 4 528 1.6E-78 T 31-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DY252_10685 23f8a6076370b9a0f9d9a97d77dffc7a 529 Gene3D G3DSA:3.40.190.10 207 516 5.1E-117 T 31-10-2018 DY252_10685 23f8a6076370b9a0f9d9a97d77dffc7a 529 Gene3D G3DSA:3.90.76.10 41 206 5.1E-117 T 31-10-2018 DY252_10685 23f8a6076370b9a0f9d9a97d77dffc7a 529 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 436 1.3E-82 T 31-10-2018 IPR000914 Solute-binding protein family 5 domain DY252_10685 23f8a6076370b9a0f9d9a97d77dffc7a 529 Gene3D G3DSA:3.10.105.10 286 504 5.1E-117 T 31-10-2018 DY252_18240 755854e374436e806eb6e4341c0ad212 323 SUPERFAMILY SSF52540 44 180 3.45E-5 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18240 755854e374436e806eb6e4341c0ad212 323 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 2 321 31.238 T 31-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 DY252_18240 755854e374436e806eb6e4341c0ad212 323 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 17 311 2.7E-53 T 31-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 DY252_18240 755854e374436e806eb6e4341c0ad212 323 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 15 319 3.3E-80 T 31-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 DY252_10930 161e2a7e8412314274cb0296e2fda0a9 178 Pfam PF08534 Redoxin 15 169 2.5E-23 T 31-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DY252_10930 161e2a7e8412314274cb0296e2fda0a9 178 Gene3D G3DSA:3.40.30.10 18 174 8.2E-24 T 31-10-2018 DY252_10930 161e2a7e8412314274cb0296e2fda0a9 178 SUPERFAMILY SSF52833 13 172 5.85E-23 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_02625 c93190c85dbfede6e5ba728c5fc9b153 218 Pfam PF03922 OmpW family 38 218 1.4E-53 T 31-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 DY252_02625 c93190c85dbfede6e5ba728c5fc9b153 218 SUPERFAMILY SSF56925 38 218 2.2E-29 T 31-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DY252_02625 c93190c85dbfede6e5ba728c5fc9b153 218 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 210 218 - T 31-10-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 DY252_02625 c93190c85dbfede6e5ba728c5fc9b153 218 Gene3D G3DSA:2.40.160.20 37 218 1.0E-60 T 31-10-2018 DY252_13555 ab8fa4bcbbd90a070d201b0058117e71 468 Pfam PF17408 Malonyl-CoA decarboxylase N-terminal domain 88 175 2.2E-21 T 31-10-2018 IPR035372 Malonyl-CoA decarboxylase, N-terminal KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 DY252_13555 ab8fa4bcbbd90a070d201b0058117e71 468 Gene3D G3DSA:1.20.140.90 34 176 2.4E-44 T 31-10-2018 IPR038351 Malonyl-CoA decarboxylase, N-terminal domain superfamily KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 DY252_13555 ab8fa4bcbbd90a070d201b0058117e71 468 Gene3D G3DSA:3.40.630.150 177 468 9.2E-107 T 31-10-2018 DY252_13555 ab8fa4bcbbd90a070d201b0058117e71 468 Pfam PF05292 Malonyl-CoA decarboxylase C-terminal domain 178 440 9.3E-98 T 31-10-2018 IPR007956 Malonyl-CoA decarboxylase, C-terminal GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 DY252_16660 4468cf749ea2e995d494a6e59492b9b9 206 Pfam PF00717 Peptidase S24-like 124 191 4.3E-13 T 31-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DY252_16660 4468cf749ea2e995d494a6e59492b9b9 206 SUPERFAMILY SSF51306 81 203 2.49E-21 T 31-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DY252_16660 4468cf749ea2e995d494a6e59492b9b9 206 Gene3D G3DSA:2.10.109.10 79 203 4.6E-19 T 31-10-2018 DY252_17115 4a1451e844be15db7b3d42884daf2d8b 374 Pfam PF00005 ABC transporter 24 165 2.3E-33 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_17115 4a1451e844be15db7b3d42884daf2d8b 374 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_17115 4a1451e844be15db7b3d42884daf2d8b 374 Gene3D G3DSA:3.40.50.300 4 242 7.5E-74 T 31-10-2018 DY252_17115 4a1451e844be15db7b3d42884daf2d8b 374 Gene3D G3DSA:2.40.50.140 270 334 1.2E-11 T 31-10-2018 DY252_17115 4a1451e844be15db7b3d42884daf2d8b 374 Pfam PF08402 TOBE domain 268 341 2.3E-12 T 31-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DY252_17115 4a1451e844be15db7b3d42884daf2d8b 374 SMART SM00382 32 215 6.2E-16 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_17115 4a1451e844be15db7b3d42884daf2d8b 374 Gene3D G3DSA:2.40.50.100 259 345 1.2E-11 T 31-10-2018 DY252_17115 4a1451e844be15db7b3d42884daf2d8b 374 SUPERFAMILY SSF52540 7 245 1.33E-82 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_17115 4a1451e844be15db7b3d42884daf2d8b 374 SUPERFAMILY SSF50331 240 349 4.37E-21 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_19635 1f371f0c0e3cde6a49d34670bb0813ea 77 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 1 49 5.4E-17 T 31-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter DY252_19635 1f371f0c0e3cde6a49d34670bb0813ea 77 PIRSF PIRSF032126 1 75 1.6E-22 T 31-10-2018 IPR016989 ATP synthase protein I, alphaproteobacterial DY252_15765 85aa8c65e2c89a9015aff8c151ef52de 633 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 356 369 - T 31-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DY252_15765 85aa8c65e2c89a9015aff8c151ef52de 633 SMART SM00382 352 496 5.1E-8 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_15765 85aa8c65e2c89a9015aff8c151ef52de 633 Gene3D G3DSA:3.40.50.300 325 504 7.3E-56 T 31-10-2018 DY252_15765 85aa8c65e2c89a9015aff8c151ef52de 633 Pfam PF01590 GAF domain 69 178 8.4E-8 T 31-10-2018 IPR003018 GAF domain GO:0005515 DY252_15765 85aa8c65e2c89a9015aff8c151ef52de 633 Gene3D G3DSA:3.30.450.40 12 202 4.7E-46 T 31-10-2018 IPR029016 GAF-like domain superfamily DY252_15765 85aa8c65e2c89a9015aff8c151ef52de 633 Pfam PF02954 Bacterial regulatory protein, Fis family 588 628 1.0E-10 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_15765 85aa8c65e2c89a9015aff8c151ef52de 633 SUPERFAMILY SSF52540 334 571 1.7E-60 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_15765 85aa8c65e2c89a9015aff8c151ef52de 633 Gene3D G3DSA:1.10.8.60 505 576 1.2E-13 T 31-10-2018 DY252_15765 85aa8c65e2c89a9015aff8c151ef52de 633 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 419 434 - T 31-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DY252_15765 85aa8c65e2c89a9015aff8c151ef52de 633 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 594 611 1.6E-5 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_15765 85aa8c65e2c89a9015aff8c151ef52de 633 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 611 631 1.6E-5 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_15765 85aa8c65e2c89a9015aff8c151ef52de 633 SUPERFAMILY SSF46689 541 631 3.33E-13 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_15765 85aa8c65e2c89a9015aff8c151ef52de 633 Pfam PF00158 Sigma-54 interaction domain 335 498 3.2E-58 T 31-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DY252_15765 85aa8c65e2c89a9015aff8c151ef52de 633 Gene3D G3DSA:1.10.10.60 586 633 3.4E-12 T 31-10-2018 DY252_15765 85aa8c65e2c89a9015aff8c151ef52de 633 SUPERFAMILY SSF55781 61 204 1.18E-9 T 31-10-2018 DY252_15765 85aa8c65e2c89a9015aff8c151ef52de 633 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 541 550 - T 31-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DY252_14120 8355fb6fb64a518ec98e9586bfffa558 252 Gene3D G3DSA:3.30.450.40 77 251 5.7E-45 T 31-10-2018 IPR029016 GAF-like domain superfamily DY252_14120 8355fb6fb64a518ec98e9586bfffa558 252 Pfam PF09339 IclR helix-turn-helix domain 8 57 8.5E-12 T 31-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DY252_14120 8355fb6fb64a518ec98e9586bfffa558 252 SMART SM00346 6 95 3.2E-16 T 31-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DY252_14120 8355fb6fb64a518ec98e9586bfffa558 252 Gene3D G3DSA:1.10.10.10 7 76 8.0E-16 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_14120 8355fb6fb64a518ec98e9586bfffa558 252 SUPERFAMILY SSF46785 8 78 8.95E-13 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_14120 8355fb6fb64a518ec98e9586bfffa558 252 SUPERFAMILY SSF55781 72 248 1.7E-41 T 31-10-2018 DY252_14120 8355fb6fb64a518ec98e9586bfffa558 252 Pfam PF01614 Bacterial transcriptional regulator 125 242 1.6E-26 T 31-10-2018 IPR014757 Transcription regulator IclR, C-terminal DY252_03930 f7a2dd54a7450e94ea01ff3f22cfc319 441 Pfam PF12838 4Fe-4S dicluster domain 24 90 3.5E-11 T 31-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DY252_03930 f7a2dd54a7450e94ea01ff3f22cfc319 441 PIRSF PIRSF000139 5 429 1.0E-133 T 31-10-2018 DY252_03930 f7a2dd54a7450e94ea01ff3f22cfc319 441 Gene3D G3DSA:1.10.1060.10 2 110 3.5E-10 T 31-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DY252_03930 f7a2dd54a7450e94ea01ff3f22cfc319 441 SUPERFAMILY SSF46548 20 103 9.94E-21 T 31-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DY252_03930 f7a2dd54a7450e94ea01ff3f22cfc319 441 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 31-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DY252_03930 f7a2dd54a7450e94ea01ff3f22cfc319 441 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 31-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DY252_03930 f7a2dd54a7450e94ea01ff3f22cfc319 441 Pfam PF02754 Cysteine-rich domain 184 271 1.8E-13 T 31-10-2018 IPR004017 Cysteine-rich domain DY252_03930 f7a2dd54a7450e94ea01ff3f22cfc319 441 Pfam PF02754 Cysteine-rich domain 321 404 1.6E-10 T 31-10-2018 IPR004017 Cysteine-rich domain DY252_21790 4a3cdcd8c3e39ac3f99d209f1055425b 250 SUPERFAMILY SSF51206 25 161 4.45E-37 T 31-10-2018 IPR018490 Cyclic nucleotide-binding-like DY252_21790 4a3cdcd8c3e39ac3f99d209f1055425b 250 SUPERFAMILY SSF46785 167 244 1.54E-20 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_21790 4a3cdcd8c3e39ac3f99d209f1055425b 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 194 210 6.1E-7 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_21790 4a3cdcd8c3e39ac3f99d209f1055425b 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 210 225 6.1E-7 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_21790 4a3cdcd8c3e39ac3f99d209f1055425b 250 Pfam PF13545 Crp-like helix-turn-helix domain 169 243 8.3E-18 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_21790 4a3cdcd8c3e39ac3f99d209f1055425b 250 Gene3D G3DSA:2.60.120.10 22 166 4.4E-40 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_21790 4a3cdcd8c3e39ac3f99d209f1055425b 250 SMART SM00419 188 236 4.0E-13 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_21790 4a3cdcd8c3e39ac3f99d209f1055425b 250 Gene3D G3DSA:1.10.10.10 167 243 1.0E-22 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_21790 4a3cdcd8c3e39ac3f99d209f1055425b 250 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 99 116 - T 31-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site DY252_21790 4a3cdcd8c3e39ac3f99d209f1055425b 250 SMART SM00100 31 152 2.9E-24 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_21790 4a3cdcd8c3e39ac3f99d209f1055425b 250 Pfam PF00027 Cyclic nucleotide-binding domain 50 136 1.1E-26 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_01340 15ca1e479c26fef3328b2490a0137ae0 303 Gene3D G3DSA:3.40.190.290 89 293 2.8E-56 T 31-10-2018 DY252_01340 15ca1e479c26fef3328b2490a0137ae0 303 SUPERFAMILY SSF53850 87 297 5.07E-41 T 31-10-2018 DY252_01340 15ca1e479c26fef3328b2490a0137ae0 303 Pfam PF03466 LysR substrate binding domain 87 294 9.5E-37 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_01340 15ca1e479c26fef3328b2490a0137ae0 303 SUPERFAMILY SSF46785 5 86 1.59E-17 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_01340 15ca1e479c26fef3328b2490a0137ae0 303 Gene3D G3DSA:1.10.10.10 3 88 5.3E-25 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_01340 15ca1e479c26fef3328b2490a0137ae0 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.4E-15 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_21685 0d0e03c09e45c455f8d67ca322dad32e 231 Gene3D G3DSA:3.40.50.1000 18 209 5.6E-38 T 31-10-2018 IPR023214 HAD superfamily DY252_21685 0d0e03c09e45c455f8d67ca322dad32e 231 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 20 197 6.2E-14 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_21685 0d0e03c09e45c455f8d67ca322dad32e 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 20 197 9.7E-15 T 31-10-2018 DY252_21685 0d0e03c09e45c455f8d67ca322dad32e 231 SUPERFAMILY SSF56784 19 220 1.1E-32 T 31-10-2018 IPR036412 HAD-like superfamily DY252_21685 0d0e03c09e45c455f8d67ca322dad32e 231 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 19 196 1.2E-60 T 31-10-2018 IPR010237 Pyrimidine 5-nucleotidase DY252_21685 0d0e03c09e45c455f8d67ca322dad32e 231 Gene3D G3DSA:1.10.150.450 30 97 5.6E-38 T 31-10-2018 DY252_14690 8e7d7573b92aead80f3909ec9e2eade8 62 Gene3D G3DSA:3.30.920.30 1 59 4.5E-31 T 31-10-2018 IPR038570 HicA superfamily DY252_14690 8e7d7573b92aead80f3909ec9e2eade8 62 SUPERFAMILY SSF54786 1 60 1.18E-19 T 31-10-2018 DY252_14690 8e7d7573b92aead80f3909ec9e2eade8 62 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 3 59 4.2E-23 T 31-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 DY252_13965 a1f4dec2b885782131bbd14268d358a8 266 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 13 259 5.1E-95 T 31-10-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 DY252_13965 a1f4dec2b885782131bbd14268d358a8 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 4.5E-6 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_13965 a1f4dec2b885782131bbd14268d358a8 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 4.5E-6 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_13965 a1f4dec2b885782131bbd14268d358a8 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 206 220 4.5E-6 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_13965 a1f4dec2b885782131bbd14268d358a8 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 4.5E-6 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_13965 a1f4dec2b885782131bbd14268d358a8 266 Gene3D G3DSA:3.40.50.1820 3 262 1.0E-68 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_13965 a1f4dec2b885782131bbd14268d358a8 266 Pfam PF12146 Serine aminopeptidase, S33 37 248 2.0E-17 T 31-10-2018 IPR022742 Serine aminopeptidase, S33 DY252_13965 a1f4dec2b885782131bbd14268d358a8 266 SUPERFAMILY SSF53474 6 259 2.03E-66 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_14335 2be0dc35f12afb50b71d18deeba287fb 275 SUPERFAMILY SSF46689 223 268 2.15E-8 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_14335 2be0dc35f12afb50b71d18deeba287fb 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 265 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_14335 2be0dc35f12afb50b71d18deeba287fb 275 Pfam PF02311 AraC-like ligand binding domain 21 138 4.2E-21 T 31-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DY252_14335 2be0dc35f12afb50b71d18deeba287fb 275 SUPERFAMILY SSF46689 170 221 1.64E-8 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_14335 2be0dc35f12afb50b71d18deeba287fb 275 SMART SM00342 187 269 4.3E-24 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_14335 2be0dc35f12afb50b71d18deeba287fb 275 SUPERFAMILY SSF51215 12 148 9.15E-19 T 31-10-2018 IPR037923 Transcription regulator HTH-like DY252_14335 2be0dc35f12afb50b71d18deeba287fb 275 Pfam PF12833 Helix-turn-helix domain 193 268 3.8E-20 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_14335 2be0dc35f12afb50b71d18deeba287fb 275 Gene3D G3DSA:1.10.10.60 231 273 9.4E-11 T 31-10-2018 DY252_14335 2be0dc35f12afb50b71d18deeba287fb 275 Gene3D G3DSA:1.10.10.60 168 230 6.6E-13 T 31-10-2018 DY252_06175 680568ae12d4657bc90cd8eb73b0f9f4 454 SUPERFAMILY SSF103473 15 422 1.7E-55 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_06175 680568ae12d4657bc90cd8eb73b0f9f4 454 Gene3D G3DSA:1.20.1250.20 13 207 4.0E-39 T 31-10-2018 DY252_06175 680568ae12d4657bc90cd8eb73b0f9f4 454 Pfam PF07690 Major Facilitator Superfamily 27 388 5.9E-27 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_06175 680568ae12d4657bc90cd8eb73b0f9f4 454 TIGRFAM TIGR00886 2A0108: nitrite transporter 21 385 4.1E-94 T 31-10-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 DY252_06175 680568ae12d4657bc90cd8eb73b0f9f4 454 Gene3D G3DSA:1.20.1250.20 229 436 1.5E-31 T 31-10-2018 DY252_12425 e86383466c67460a548867da2edb840c 218 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 6 203 7.3E-49 T 31-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DY252_12425 e86383466c67460a548867da2edb840c 218 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 31-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DY252_12425 e86383466c67460a548867da2edb840c 218 Hamap MF_00165 Thymidylate kinase [tmk]. 7 213 30.086 T 31-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DY252_12425 e86383466c67460a548867da2edb840c 218 Gene3D G3DSA:3.40.50.300 2 213 1.5E-68 T 31-10-2018 DY252_12425 e86383466c67460a548867da2edb840c 218 SUPERFAMILY SSF52540 5 210 7.2E-59 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12425 e86383466c67460a548867da2edb840c 218 Pfam PF02223 Thymidylate kinase 11 203 9.9E-45 T 31-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 DY252_08630 0c201ac8454d4e8f3dbfb57b9d346526 252 SUPERFAMILY SSF55781 75 250 1.44E-31 T 31-10-2018 DY252_08630 0c201ac8454d4e8f3dbfb57b9d346526 252 Pfam PF09339 IclR helix-turn-helix domain 13 60 2.9E-11 T 31-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DY252_08630 0c201ac8454d4e8f3dbfb57b9d346526 252 SUPERFAMILY SSF46785 13 83 1.01E-12 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_08630 0c201ac8454d4e8f3dbfb57b9d346526 252 Gene3D G3DSA:3.30.450.40 84 252 5.0E-23 T 31-10-2018 IPR029016 GAF-like domain superfamily DY252_08630 0c201ac8454d4e8f3dbfb57b9d346526 252 SMART SM00346 10 100 1.9E-6 T 31-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DY252_08630 0c201ac8454d4e8f3dbfb57b9d346526 252 Gene3D G3DSA:1.10.10.10 4 82 7.2E-13 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_05945 2bab0cd2d2487c46bda75cb008e1d3d8 203 Pfam PF02036 SCP-2 sterol transfer family 28 102 2.0E-7 T 31-10-2018 IPR003033 SCP2 sterol-binding domain DY252_05945 2bab0cd2d2487c46bda75cb008e1d3d8 203 SUPERFAMILY SSF55718 7 108 3.73E-12 T 31-10-2018 IPR036527 SCP2 sterol-binding domain superfamily DY252_01265 b6208efd04a5da08445bada811377273 575 Hamap MF_01518 Adenine deaminase [ade]. 24 575 36.353 T 31-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 DY252_01265 b6208efd04a5da08445bada811377273 575 Pfam PF01979 Amidohydrolase family 71 356 9.3E-24 T 31-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DY252_01265 b6208efd04a5da08445bada811377273 575 SUPERFAMILY SSF51338 22 356 5.4E-12 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_01265 b6208efd04a5da08445bada811377273 575 Pfam PF13382 Adenine deaminase C-terminal domain 407 572 2.0E-67 T 31-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 DY252_01265 b6208efd04a5da08445bada811377273 575 Gene3D G3DSA:2.30.40.10 17 356 9.2E-115 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_01265 b6208efd04a5da08445bada811377273 575 Gene3D G3DSA:3.20.20.140 75 320 9.2E-115 T 31-10-2018 DY252_01265 b6208efd04a5da08445bada811377273 575 TIGRFAM TIGR01178 ade: adenine deaminase 24 575 3.6E-180 T 31-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 DY252_01265 b6208efd04a5da08445bada811377273 575 SUPERFAMILY SSF51556 75 325 2.13E-33 T 31-10-2018 IPR032466 Metal-dependent hydrolase DY252_02170 a71f8f0f4754b8fa0c9b38602c5de9d6 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 280 1.7E-9 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_02170 a71f8f0f4754b8fa0c9b38602c5de9d6 285 Gene3D G3DSA:1.10.3720.10 9 284 2.8E-44 T 31-10-2018 IPR035906 MetI-like superfamily DY252_02170 a71f8f0f4754b8fa0c9b38602c5de9d6 285 SUPERFAMILY SSF161098 19 272 8.22E-51 T 31-10-2018 IPR035906 MetI-like superfamily DY252_09920 df243cc9209b997e0a535d78840146dc 156 SMART SM01049 22 108 3.1E-4 T 31-10-2018 IPR033480 Single Cache domain 2 DY252_09920 df243cc9209b997e0a535d78840146dc 156 Pfam PF17200 Single Cache domain 2 26 143 9.6E-12 T 31-10-2018 IPR033480 Single Cache domain 2 DY252_09920 df243cc9209b997e0a535d78840146dc 156 Gene3D G3DSA:3.30.450.20 14 156 8.9E-15 T 31-10-2018 DY252_05250 121b0d0ac4e676704323f983f8e4a1d1 432 SMART SM00387 323 432 1.3E-21 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_05250 121b0d0ac4e676704323f983f8e4a1d1 432 SMART SM00304 174 226 3.4E-4 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_05250 121b0d0ac4e676704323f983f8e4a1d1 432 Gene3D G3DSA:3.30.565.10 289 430 2.7E-27 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_05250 121b0d0ac4e676704323f983f8e4a1d1 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 285 1.9E-6 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_05250 121b0d0ac4e676704323f983f8e4a1d1 432 SUPERFAMILY SSF47384 211 285 5.1E-11 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_05250 121b0d0ac4e676704323f983f8e4a1d1 432 Gene3D G3DSA:1.10.287.130 178 286 1.1E-18 T 31-10-2018 DY252_05250 121b0d0ac4e676704323f983f8e4a1d1 432 SUPERFAMILY SSF55874 292 430 6.29E-29 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_05250 121b0d0ac4e676704323f983f8e4a1d1 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 430 1.1E-16 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_05250 121b0d0ac4e676704323f983f8e4a1d1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 2.8E-12 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_05250 121b0d0ac4e676704323f983f8e4a1d1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 2.8E-12 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_05250 121b0d0ac4e676704323f983f8e4a1d1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 429 2.8E-12 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_05250 121b0d0ac4e676704323f983f8e4a1d1 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 2.8E-12 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_05250 121b0d0ac4e676704323f983f8e4a1d1 432 SMART SM00388 227 285 3.7E-8 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_00435 8faac93b7ee0b88baf2ab783844f9169 298 Pfam PF01545 Cation efflux family 127 292 6.7E-10 T 31-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DY252_00435 8faac93b7ee0b88baf2ab783844f9169 298 SUPERFAMILY SSF55008 34 95 1.15E-7 T 31-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DY252_00435 8faac93b7ee0b88baf2ab783844f9169 298 Gene3D G3DSA:1.20.1510.10 122 296 6.2E-10 T 31-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DY252_00435 8faac93b7ee0b88baf2ab783844f9169 298 SUPERFAMILY SSF161111 119 294 4.45E-29 T 31-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DY252_00095 5ebabc8bfb098a94bae0f706388f8174 331 Gene3D G3DSA:3.90.25.10 173 306 2.7E-119 T 31-10-2018 DY252_00095 5ebabc8bfb098a94bae0f706388f8174 331 Gene3D G3DSA:3.40.50.720 3 252 2.7E-119 T 31-10-2018 DY252_00095 5ebabc8bfb098a94bae0f706388f8174 331 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 324 2.2E-137 T 31-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 DY252_00095 5ebabc8bfb098a94bae0f706388f8174 331 SUPERFAMILY SSF51735 1 322 1.38E-90 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_00095 5ebabc8bfb098a94bae0f706388f8174 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 252 2.1E-56 T 31-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DY252_02945 8393983edfe2dc5ce3d949c7248fc61c 313 SUPERFAMILY SSF103481 33 134 3.92E-13 T 31-10-2018 DY252_02945 8393983edfe2dc5ce3d949c7248fc61c 313 SUPERFAMILY SSF103481 186 286 7.19E-7 T 31-10-2018 DY252_02945 8393983edfe2dc5ce3d949c7248fc61c 313 Pfam PF00892 EamA-like transporter family 6 132 4.0E-14 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_02945 8393983edfe2dc5ce3d949c7248fc61c 313 Pfam PF00892 EamA-like transporter family 147 283 1.5E-7 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_04215 8f26199e52cbc8df68df458b708a3489 685 Pfam PF01642 Methylmalonyl-CoA mutase 12 497 4.5E-133 T 31-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DY252_04215 8f26199e52cbc8df68df458b708a3489 685 Gene3D G3DSA:3.40.50.280 517 673 2.5E-42 T 31-10-2018 DY252_04215 8f26199e52cbc8df68df458b708a3489 685 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 14 503 3.3E-143 T 31-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DY252_04215 8f26199e52cbc8df68df458b708a3489 685 SUPERFAMILY SSF51703 12 499 7.85E-160 T 31-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DY252_04215 8f26199e52cbc8df68df458b708a3489 685 SUPERFAMILY SSF52242 510 662 7.2E-45 T 31-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 DY252_04215 8f26199e52cbc8df68df458b708a3489 685 Gene3D G3DSA:3.20.20.240 7 516 2.7E-169 T 31-10-2018 DY252_04215 8f26199e52cbc8df68df458b708a3489 685 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 534 662 4.8E-33 T 31-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DY252_04215 8f26199e52cbc8df68df458b708a3489 685 Pfam PF02310 B12 binding domain 535 638 3.3E-15 T 31-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DY252_09325 d1cfb3699a2ac52c48d2ff0cf1f6083c 271 SUPERFAMILY SSF52540 1 241 2.84E-83 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_09325 d1cfb3699a2ac52c48d2ff0cf1f6083c 271 Gene3D G3DSA:3.40.50.300 1 263 5.0E-85 T 31-10-2018 DY252_09325 d1cfb3699a2ac52c48d2ff0cf1f6083c 271 SMART SM00382 32 228 6.4E-15 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_09325 d1cfb3699a2ac52c48d2ff0cf1f6083c 271 Pfam PF00005 ABC transporter 23 171 7.5E-35 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_09325 d1cfb3699a2ac52c48d2ff0cf1f6083c 271 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_01090 946a76245ed136c4cf5cb301717f9318 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 18 235 27.642 T 31-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 DY252_01090 946a76245ed136c4cf5cb301717f9318 239 SUPERFAMILY SSF53335 59 233 1.67E-24 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_01090 946a76245ed136c4cf5cb301717f9318 239 Gene3D G3DSA:3.40.50.150 26 238 2.2E-53 T 31-10-2018 DY252_01090 946a76245ed136c4cf5cb301717f9318 239 Pfam PF02390 Putative methyltransferase 62 226 5.3E-37 T 31-10-2018 DY252_18110 bc4f2bf3204340a07dff5ac6dd50b6d3 465 Pfam PF00206 Lyase 17 347 1.1E-110 T 31-10-2018 IPR022761 Fumarate lyase, N-terminal DY252_18110 bc4f2bf3204340a07dff5ac6dd50b6d3 465 Gene3D G3DSA:1.20.200.10 144 411 5.6E-119 T 31-10-2018 DY252_18110 bc4f2bf3204340a07dff5ac6dd50b6d3 465 SUPERFAMILY SSF48557 9 465 7.66E-155 T 31-10-2018 IPR008948 L-Aspartase-like GO:0003824 DY252_18110 bc4f2bf3204340a07dff5ac6dd50b6d3 465 Gene3D G3DSA:1.10.40.30 413 465 2.8E-23 T 31-10-2018 DY252_18110 bc4f2bf3204340a07dff5ac6dd50b6d3 465 Pfam PF10415 Fumarase C C-terminus 413 465 4.0E-21 T 31-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DY252_18110 bc4f2bf3204340a07dff5ac6dd50b6d3 465 PRINTS PR00149 Fumarate lyase superfamily signature 322 338 2.8E-34 T 31-10-2018 IPR000362 Fumarate lyase family DY252_18110 bc4f2bf3204340a07dff5ac6dd50b6d3 465 PRINTS PR00149 Fumarate lyase superfamily signature 185 203 2.8E-34 T 31-10-2018 IPR000362 Fumarate lyase family DY252_18110 bc4f2bf3204340a07dff5ac6dd50b6d3 465 PRINTS PR00149 Fumarate lyase superfamily signature 139 157 2.8E-34 T 31-10-2018 IPR000362 Fumarate lyase family DY252_18110 bc4f2bf3204340a07dff5ac6dd50b6d3 465 PRINTS PR00149 Fumarate lyase superfamily signature 276 303 2.8E-34 T 31-10-2018 IPR000362 Fumarate lyase family DY252_18110 bc4f2bf3204340a07dff5ac6dd50b6d3 465 ProSitePatterns PS00163 Fumarate lyases signature. 322 331 - T 31-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DY252_18110 bc4f2bf3204340a07dff5ac6dd50b6d3 465 Gene3D G3DSA:1.10.275.10 10 143 2.1E-58 T 31-10-2018 IPR024083 Fumarase/histidase, N-terminal DY252_18110 bc4f2bf3204340a07dff5ac6dd50b6d3 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 9 465 87.136 T 31-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DY252_18110 bc4f2bf3204340a07dff5ac6dd50b6d3 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 10 465 8.0E-222 T 31-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DY252_17720 a222d045d464b7f9efafc41994283530 561 SUPERFAMILY SSF161098 12 266 3.08E-12 T 31-10-2018 IPR035906 MetI-like superfamily DY252_17720 a222d045d464b7f9efafc41994283530 561 Gene3D G3DSA:1.10.3720.10 7 277 1.3E-11 T 31-10-2018 IPR035906 MetI-like superfamily DY252_17720 a222d045d464b7f9efafc41994283530 561 Gene3D G3DSA:1.10.3720.10 302 549 7.6E-22 T 31-10-2018 IPR035906 MetI-like superfamily DY252_17720 a222d045d464b7f9efafc41994283530 561 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 373 541 3.1E-9 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_17720 a222d045d464b7f9efafc41994283530 561 SUPERFAMILY SSF161098 304 542 1.21E-28 T 31-10-2018 IPR035906 MetI-like superfamily DY252_01400 fcbbb754f9ea603788e52826fa776382 157 Gene3D G3DSA:3.10.180.70 1 157 1.5E-61 T 31-10-2018 DY252_01400 fcbbb754f9ea603788e52826fa776382 157 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 2 116 2.2E-42 T 31-10-2018 IPR028973 PhnB-like DY252_01400 fcbbb754f9ea603788e52826fa776382 157 SUPERFAMILY SSF54593 3 154 1.02E-45 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_01400 fcbbb754f9ea603788e52826fa776382 157 PIRSF PIRSF021700 1 156 8.6E-62 T 31-10-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase DY252_07995 f97ccb4b2854b93cf52f65f2faab2607 425 SUPERFAMILY SSF53067 102 410 9.58E-42 T 31-10-2018 DY252_07995 f97ccb4b2854b93cf52f65f2faab2607 425 Gene3D G3DSA:3.30.420.40 110 404 6.0E-66 T 31-10-2018 DY252_07995 f97ccb4b2854b93cf52f65f2faab2607 425 Gene3D G3DSA:1.10.10.10 10 96 1.1E-19 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_07995 f97ccb4b2854b93cf52f65f2faab2607 425 SUPERFAMILY SSF46785 11 69 3.26E-13 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_07995 f97ccb4b2854b93cf52f65f2faab2607 425 Pfam PF00480 ROK family 103 410 1.2E-44 T 31-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DY252_07995 f97ccb4b2854b93cf52f65f2faab2607 425 Pfam PF12802 MarR family 13 62 1.6E-6 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_07995 f97ccb4b2854b93cf52f65f2faab2607 425 ProSitePatterns PS01125 ROK family signature. 237 264 - T 31-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DY252_07995 f97ccb4b2854b93cf52f65f2faab2607 425 Gene3D G3DSA:3.30.420.40 227 395 6.0E-66 T 31-10-2018 DY252_13605 882ecfd457fca0a5542020350c9bb0aa 518 Gene3D G3DSA:1.10.579.10 299 494 3.3E-63 T 31-10-2018 DY252_13605 882ecfd457fca0a5542020350c9bb0aa 518 Pfam PF00875 DNA photolyase 9 134 7.1E-28 T 31-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 DY252_13605 882ecfd457fca0a5542020350c9bb0aa 518 SUPERFAMILY SSF48173 193 478 4.45E-81 T 31-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 DY252_13605 882ecfd457fca0a5542020350c9bb0aa 518 Pfam PF03441 FAD binding domain of DNA photolyase 276 472 5.5E-61 T 31-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 DY252_13605 882ecfd457fca0a5542020350c9bb0aa 518 Gene3D G3DSA:3.40.50.620 5 135 1.8E-31 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_13605 882ecfd457fca0a5542020350c9bb0aa 518 Gene3D G3DSA:1.25.40.80 143 290 2.4E-14 T 31-10-2018 DY252_13605 882ecfd457fca0a5542020350c9bb0aa 518 SUPERFAMILY SSF52425 7 156 2.75E-43 T 31-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 DY252_05175 371f486bf7b1a68c5be1ef0b9f17eb1f 183 Pfam PF00355 Rieske [2Fe-2S] domain 108 167 2.8E-11 T 31-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DY252_05175 371f486bf7b1a68c5be1ef0b9f17eb1f 183 Gene3D G3DSA:1.20.5.510 6 47 1.3E-12 T 31-10-2018 DY252_05175 371f486bf7b1a68c5be1ef0b9f17eb1f 183 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 39 6.3E-5 T 31-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DY252_05175 371f486bf7b1a68c5be1ef0b9f17eb1f 183 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 16 183 1.4E-67 T 31-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 DY252_05175 371f486bf7b1a68c5be1ef0b9f17eb1f 183 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 10 47 9.8E-19 T 31-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 DY252_05175 371f486bf7b1a68c5be1ef0b9f17eb1f 183 PRINTS PR00162 Rieske 2Fe-2S subunit signature 143 155 8.3E-18 T 31-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DY252_05175 371f486bf7b1a68c5be1ef0b9f17eb1f 183 PRINTS PR00162 Rieske 2Fe-2S subunit signature 155 167 8.3E-18 T 31-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DY252_05175 371f486bf7b1a68c5be1ef0b9f17eb1f 183 PRINTS PR00162 Rieske 2Fe-2S subunit signature 116 127 8.3E-18 T 31-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DY252_05175 371f486bf7b1a68c5be1ef0b9f17eb1f 183 SUPERFAMILY SSF50022 38 181 4.45E-41 T 31-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DY252_05175 371f486bf7b1a68c5be1ef0b9f17eb1f 183 Gene3D G3DSA:2.102.10.10 50 183 7.5E-51 T 31-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DY252_20040 f85918e2c16ccbf8129653d9b26b5b2a 256 SUPERFAMILY SSF51735 6 255 1.06E-78 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_20040 f85918e2c16ccbf8129653d9b26b5b2a 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.6E-41 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_20040 f85918e2c16ccbf8129653d9b26b5b2a 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.6E-41 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_20040 f85918e2c16ccbf8129653d9b26b5b2a 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.6E-41 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_20040 f85918e2c16ccbf8129653d9b26b5b2a 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.6E-41 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_20040 f85918e2c16ccbf8129653d9b26b5b2a 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.6E-41 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_20040 f85918e2c16ccbf8129653d9b26b5b2a 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.6E-41 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_20040 f85918e2c16ccbf8129653d9b26b5b2a 256 Gene3D G3DSA:3.40.50.720 1 256 1.5E-83 T 31-10-2018 DY252_20040 f85918e2c16ccbf8129653d9b26b5b2a 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_20040 f85918e2c16ccbf8129653d9b26b5b2a 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.9E-13 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_20040 f85918e2c16ccbf8129653d9b26b5b2a 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.9E-13 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_20040 f85918e2c16ccbf8129653d9b26b5b2a 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.9E-13 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_20040 f85918e2c16ccbf8129653d9b26b5b2a 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 254 4.7E-65 T 31-10-2018 DY252_14115 00e8a5fba6c55c5afd8995bf376fe858 575 Gene3D G3DSA:3.40.50.970 16 200 6.9E-48 T 31-10-2018 DY252_14115 00e8a5fba6c55c5afd8995bf376fe858 575 Gene3D G3DSA:3.40.50.1220 211 383 1.8E-26 T 31-10-2018 DY252_14115 00e8a5fba6c55c5afd8995bf376fe858 575 Gene3D G3DSA:3.40.50.970 386 575 3.5E-35 T 31-10-2018 DY252_14115 00e8a5fba6c55c5afd8995bf376fe858 575 SUPERFAMILY SSF52518 389 575 4.83E-32 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_14115 00e8a5fba6c55c5afd8995bf376fe858 575 SUPERFAMILY SSF52467 180 363 3.71E-23 T 31-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DY252_14115 00e8a5fba6c55c5afd8995bf376fe858 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 15 197 4.4E-41 T 31-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DY252_14115 00e8a5fba6c55c5afd8995bf376fe858 575 SUPERFAMILY SSF52518 10 205 4.17E-36 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_14115 00e8a5fba6c55c5afd8995bf376fe858 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 217 343 2.5E-9 T 31-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DY252_14115 00e8a5fba6c55c5afd8995bf376fe858 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 427 562 6.0E-22 T 31-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DY252_14815 37349e67209a92cd5026cc839ee90ab7 256 SUPERFAMILY SSF47226 9 111 1.62E-5 T 31-10-2018 IPR036641 HPT domain superfamily GO:0000160 DY252_14815 37349e67209a92cd5026cc839ee90ab7 256 Gene3D G3DSA:3.40.50.12740 139 224 5.2E-7 T 31-10-2018 DY252_14815 37349e67209a92cd5026cc839ee90ab7 256 SUPERFAMILY SSF52172 137 220 9.67E-8 T 31-10-2018 IPR011006 CheY-like superfamily DY252_00570 40c0bb46447cdaeef0c83561bc4ce251 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 611 4.4E-11 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_00570 40c0bb46447cdaeef0c83561bc4ce251 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 625 4.4E-11 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_00570 40c0bb46447cdaeef0c83561bc4ce251 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 646 4.4E-11 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_00570 40c0bb46447cdaeef0c83561bc4ce251 669 SMART SM00388 448 516 2.1E-4 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_00570 40c0bb46447cdaeef0c83561bc4ce251 669 SMART SM00387 558 669 3.6E-23 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_00570 40c0bb46447cdaeef0c83561bc4ce251 669 SUPERFAMILY SSF47384 444 513 8.44E-9 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_00570 40c0bb46447cdaeef0c83561bc4ce251 669 Gene3D G3DSA:1.20.1480.50 316 415 5.6E-7 T 31-10-2018 DY252_00570 40c0bb46447cdaeef0c83561bc4ce251 669 SMART SM00304 355 407 3.5E-5 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_00570 40c0bb46447cdaeef0c83561bc4ce251 669 SUPERFAMILY SSF158472 358 401 1.31E-6 T 31-10-2018 DY252_00570 40c0bb46447cdaeef0c83561bc4ce251 669 Gene3D G3DSA:1.10.287.130 425 511 8.7E-19 T 31-10-2018 DY252_00570 40c0bb46447cdaeef0c83561bc4ce251 669 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 559 666 3.2E-16 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_00570 40c0bb46447cdaeef0c83561bc4ce251 669 Gene3D G3DSA:3.30.565.10 519 669 2.5E-33 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_00570 40c0bb46447cdaeef0c83561bc4ce251 669 SUPERFAMILY SSF55874 508 666 1.83E-33 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_11065 3854c0e85969cdfba3b4e4bf241ac693 261 SUPERFAMILY SSF52540 20 218 1.25E-49 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_11065 3854c0e85969cdfba3b4e4bf241ac693 261 Gene3D G3DSA:3.40.50.300 12 248 7.4E-52 T 31-10-2018 DY252_11065 3854c0e85969cdfba3b4e4bf241ac693 261 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_11065 3854c0e85969cdfba3b4e4bf241ac693 261 Pfam PF00005 ABC transporter 36 171 2.8E-24 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_11065 3854c0e85969cdfba3b4e4bf241ac693 261 SMART SM00382 44 218 5.8E-14 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_15990 d386d5b0d82f6dcf123230ef002b1926 498 SUPERFAMILY SSF53067 6 255 2.92E-93 T 31-10-2018 DY252_15990 d386d5b0d82f6dcf123230ef002b1926 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 449 1.0E-57 T 31-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DY252_15990 d386d5b0d82f6dcf123230ef002b1926 498 Hamap MF_00186 Glycerol kinase [glpK]. 4 496 54.537 T 31-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DY252_15990 d386d5b0d82f6dcf123230ef002b1926 498 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 31-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DY252_15990 d386d5b0d82f6dcf123230ef002b1926 498 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 31-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DY252_15990 d386d5b0d82f6dcf123230ef002b1926 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 252 3.9E-76 T 31-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DY252_15990 d386d5b0d82f6dcf123230ef002b1926 498 PIRSF PIRSF000538 4 498 1.0E-176 T 31-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DY252_15990 d386d5b0d82f6dcf123230ef002b1926 498 Gene3D G3DSA:3.30.420.40 1 253 8.7E-104 T 31-10-2018 DY252_15990 d386d5b0d82f6dcf123230ef002b1926 498 SUPERFAMILY SSF53067 254 493 4.53E-82 T 31-10-2018 DY252_15990 d386d5b0d82f6dcf123230ef002b1926 498 Gene3D G3DSA:3.30.420.40 254 497 9.0E-88 T 31-10-2018 DY252_15990 d386d5b0d82f6dcf123230ef002b1926 498 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 6 493 2.1E-211 T 31-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DY252_18540 be0bafa417bb06b34c26efbc57846698 349 Pfam PF00669 Bacterial flagellin N-terminal helical region 46 133 5.0E-7 T 31-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DY252_18540 be0bafa417bb06b34c26efbc57846698 349 Gene3D G3DSA:1.20.1330.10 50 226 7.4E-14 T 31-10-2018 DY252_18540 be0bafa417bb06b34c26efbc57846698 349 SUPERFAMILY SSF64518 46 215 3.01E-7 T 31-10-2018 DY252_17445 150f6e3a19684536779bea3b811e8aef 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 9.5E-29 T 31-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DY252_17445 150f6e3a19684536779bea3b811e8aef 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.9E-20 T 31-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DY252_17445 150f6e3a19684536779bea3b811e8aef 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.9E-20 T 31-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DY252_17445 150f6e3a19684536779bea3b811e8aef 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.9E-20 T 31-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DY252_17445 150f6e3a19684536779bea3b811e8aef 89 PIRSF PIRSF004669 1 88 1.5E-30 T 31-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DY252_17445 150f6e3a19684536779bea3b811e8aef 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 83 3.1E-29 T 31-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 DY252_18645 5f04923d381075a2423e58f1ca676355 122 Gene3D G3DSA:1.10.10.10 6 115 4.6E-42 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_18645 5f04923d381075a2423e58f1ca676355 122 Pfam PF01638 HxlR-like helix-turn-helix 20 106 5.8E-38 T 31-10-2018 IPR002577 Helix-turn-helix, HxlR type DY252_18645 5f04923d381075a2423e58f1ca676355 122 SUPERFAMILY SSF46785 9 106 8.47E-36 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_10020 79bd47467bb6207a447a58279ac80b65 660 Gene3D G3DSA:3.40.50.970 4 324 3.0E-114 T 31-10-2018 DY252_10020 79bd47467bb6207a447a58279ac80b65 660 SMART SM00861 352 524 2.5E-67 T 31-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DY252_10020 79bd47467bb6207a447a58279ac80b65 660 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 659 6.2E-258 T 31-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 DY252_10020 79bd47467bb6207a447a58279ac80b65 660 Pfam PF02779 Transketolase, pyrimidine binding domain 351 523 1.9E-46 T 31-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DY252_10020 79bd47467bb6207a447a58279ac80b65 660 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 31-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DY252_10020 79bd47467bb6207a447a58279ac80b65 660 Gene3D G3DSA:3.40.50.970 325 533 1.5E-82 T 31-10-2018 DY252_10020 79bd47467bb6207a447a58279ac80b65 660 Pfam PF02780 Transketolase, C-terminal domain 543 651 1.5E-11 T 31-10-2018 IPR033248 Transketolase, C-terminal domain DY252_10020 79bd47467bb6207a447a58279ac80b65 660 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 31-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DY252_10020 79bd47467bb6207a447a58279ac80b65 660 SUPERFAMILY SSF52518 5 326 1.14E-110 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_10020 79bd47467bb6207a447a58279ac80b65 660 SUPERFAMILY SSF52922 532 659 3.14E-43 T 31-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DY252_10020 79bd47467bb6207a447a58279ac80b65 660 Gene3D G3DSA:3.40.50.920 537 660 1.1E-42 T 31-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DY252_10020 79bd47467bb6207a447a58279ac80b65 660 SUPERFAMILY SSF52518 341 525 5.15E-67 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_10020 79bd47467bb6207a447a58279ac80b65 660 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 331 6.1E-137 T 31-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DY252_02965 488f2d2464d203d0678a2a4e54b2344d 261 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 208 222 - T 31-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 DY252_02965 488f2d2464d203d0678a2a4e54b2344d 261 Gene3D G3DSA:3.40.190.80 141 257 6.4E-23 T 31-10-2018 DY252_02965 488f2d2464d203d0678a2a4e54b2344d 261 Pfam PF00459 Inositol monophosphatase family 5 254 1.7E-52 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_02965 488f2d2464d203d0678a2a4e54b2344d 261 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 31-10-2018 IPR020583 Inositol monophosphatase, metal-binding site DY252_02965 488f2d2464d203d0678a2a4e54b2344d 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.2E-20 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_02965 488f2d2464d203d0678a2a4e54b2344d 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 205 229 1.2E-20 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_02965 488f2d2464d203d0678a2a4e54b2344d 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 1.2E-20 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_02965 488f2d2464d203d0678a2a4e54b2344d 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.2E-20 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_02965 488f2d2464d203d0678a2a4e54b2344d 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 1.2E-20 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_02965 488f2d2464d203d0678a2a4e54b2344d 261 Gene3D G3DSA:3.30.540.10 2 140 5.2E-43 T 31-10-2018 DY252_02965 488f2d2464d203d0678a2a4e54b2344d 261 SUPERFAMILY SSF56655 5 258 2.75E-69 T 31-10-2018 DY252_09800 689567f96fc80e1ff2321b2a6ffe47ac 405 Gene3D G3DSA:1.20.1720.10 15 394 3.5E-94 T 31-10-2018 DY252_09800 689567f96fc80e1ff2321b2a6ffe47ac 405 SUPERFAMILY SSF103473 13 393 4.71E-55 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_09800 689567f96fc80e1ff2321b2a6ffe47ac 405 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 395 6.3E-90 T 31-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 DY252_09800 689567f96fc80e1ff2321b2a6ffe47ac 405 Pfam PF07690 Major Facilitator Superfamily 22 362 9.1E-40 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_09800 689567f96fc80e1ff2321b2a6ffe47ac 405 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 85 - T 31-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DY252_07335 02e99ac296f352a5ef7716840dd1d780 387 SMART SM01002 152 319 7.6E-76 T 31-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DY252_07335 02e99ac296f352a5ef7716840dd1d780 387 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 176 201 - T 31-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 DY252_07335 02e99ac296f352a5ef7716840dd1d780 387 SUPERFAMILY SSF51735 143 312 3.22E-37 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_07335 02e99ac296f352a5ef7716840dd1d780 387 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 147 376 6.6E-69 T 31-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DY252_07335 02e99ac296f352a5ef7716840dd1d780 387 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 5 143 5.1E-42 T 31-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DY252_07335 02e99ac296f352a5ef7716840dd1d780 387 SUPERFAMILY SSF52283 1 174 9.35E-49 T 31-10-2018 DY252_07335 02e99ac296f352a5ef7716840dd1d780 387 Gene3D G3DSA:3.40.50.720 143 326 5.1E-139 T 31-10-2018 DY252_07335 02e99ac296f352a5ef7716840dd1d780 387 SMART SM01003 4 143 7.3E-60 T 31-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DY252_07335 02e99ac296f352a5ef7716840dd1d780 387 Gene3D G3DSA:3.40.50.720 4 373 5.1E-139 T 31-10-2018 DY252_17780 b674ec2c4ebe4615a06155a00350efab 168 SUPERFAMILY SSF50341 17 159 4.97E-32 T 31-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DY252_17780 b674ec2c4ebe4615a06155a00350efab 168 SMART SM00260 21 158 9.7E-35 T 31-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DY252_17780 b674ec2c4ebe4615a06155a00350efab 168 Gene3D G3DSA:2.30.30.40 28 152 5.7E-33 T 31-10-2018 DY252_17780 b674ec2c4ebe4615a06155a00350efab 168 Pfam PF01584 CheW-like domain 26 159 5.2E-30 T 31-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DY252_17780 b674ec2c4ebe4615a06155a00350efab 168 Gene3D G3DSA:2.40.50.180 44 153 5.7E-33 T 31-10-2018 DY252_05285 3040f6ea9767ddc2125a9e09ca5c9a2e 238 Gene3D G3DSA:1.10.357.10 4 185 1.5E-59 T 31-10-2018 DY252_05285 3040f6ea9767ddc2125a9e09ca5c9a2e 238 SUPERFAMILY SSF46689 3 69 7.18E-11 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_05285 3040f6ea9767ddc2125a9e09ca5c9a2e 238 Pfam PF08511 COQ9 147 184 5.2E-5 T 31-10-2018 IPR013718 COQ9 Reactome: R-HSA-2142789 DY252_05285 3040f6ea9767ddc2125a9e09ca5c9a2e 238 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 55 1.8E-9 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_14810 154d012dad844e10f5ed1fdc4f0c7700 154 Pfam PF00578 AhpC/TSA family 5 133 1.3E-40 T 31-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DY252_14810 154d012dad844e10f5ed1fdc4f0c7700 154 SUPERFAMILY SSF52833 5 154 2.28E-56 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_14810 154d012dad844e10f5ed1fdc4f0c7700 154 Gene3D G3DSA:3.40.30.10 2 153 4.4E-53 T 31-10-2018 DY252_14810 154d012dad844e10f5ed1fdc4f0c7700 154 PIRSF PIRSF000239 1 154 8.2E-28 T 31-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DY252_09250 055abba5af96245164f2d1a7a4470c3a 331 Gene3D G3DSA:3.90.870.10 5 211 3.4E-76 T 31-10-2018 DY252_09250 055abba5af96245164f2d1a7a4470c3a 331 Gene3D G3DSA:3.40.50.11030 212 328 2.3E-16 T 31-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily DY252_09250 055abba5af96245164f2d1a7a4470c3a 331 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 12 208 3.4E-58 T 31-10-2018 IPR006070 YrdC-like domain GO:0003725 DY252_09250 055abba5af96245164f2d1a7a4470c3a 331 PIRSF PIRSF004930 4 328 1.9E-106 T 31-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 DY252_09250 055abba5af96245164f2d1a7a4470c3a 331 Pfam PF03481 Putative GTP-binding controlling metal-binding 199 323 5.4E-19 T 31-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain DY252_09250 055abba5af96245164f2d1a7a4470c3a 331 SUPERFAMILY SSF55821 11 209 7.02E-63 T 31-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DY252_09250 055abba5af96245164f2d1a7a4470c3a 331 Pfam PF01300 Telomere recombination 22 197 2.2E-57 T 31-10-2018 IPR006070 YrdC-like domain GO:0003725 DY252_16110 6d792cfe2460b7cd966dbec61cead538 302 Gene3D G3DSA:1.10.3720.10 95 296 5.5E-18 T 31-10-2018 IPR035906 MetI-like superfamily DY252_16110 6d792cfe2460b7cd966dbec61cead538 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 289 5.5E-20 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_16110 6d792cfe2460b7cd966dbec61cead538 302 SUPERFAMILY SSF161098 98 289 3.53E-21 T 31-10-2018 IPR035906 MetI-like superfamily DY252_21295 c3a1f1afb78a8f2ae4433da633cd323e 66 SUPERFAMILY SSF46955 5 54 2.56E-6 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_21295 c3a1f1afb78a8f2ae4433da633cd323e 66 Pfam PF12728 Helix-turn-helix domain 7 54 5.9E-17 T 31-10-2018 DY252_21295 c3a1f1afb78a8f2ae4433da633cd323e 66 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 51 1.9E-13 T 31-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 DY252_19510 57b96df20ecec3779b2aaddd179fa466 455 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 73 236 2.7E-7 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_19510 57b96df20ecec3779b2aaddd179fa466 455 SUPERFAMILY SSF53850 72 270 2.06E-17 T 31-10-2018 DY252_19510 57b96df20ecec3779b2aaddd179fa466 455 Gene3D G3DSA:3.40.190.10 73 146 1.5E-9 T 31-10-2018 DY252_19510 57b96df20ecec3779b2aaddd179fa466 455 Gene3D G3DSA:3.40.190.10 147 236 1.5E-9 T 31-10-2018 DY252_08725 7028343153c1f7d7ae988a414ed6c630 239 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 224 2.1E-51 T 31-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 DY252_08725 7028343153c1f7d7ae988a414ed6c630 239 Gene3D G3DSA:3.40.50.1360 2 234 3.0E-63 T 31-10-2018 DY252_08725 7028343153c1f7d7ae988a414ed6c630 239 SUPERFAMILY SSF100950 4 228 6.28E-51 T 31-10-2018 IPR037171 NagB/RpiA transferase-like DY252_08725 7028343153c1f7d7ae988a414ed6c630 239 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 7 229 1.5E-49 T 31-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 DY252_14805 eb9ebf9c85fcc90975d7ff5f2033b458 991 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 55 300 1.3E-55 T 31-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 DY252_14805 eb9ebf9c85fcc90975d7ff5f2033b458 991 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 574 818 1.6E-59 T 31-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 DY252_14805 eb9ebf9c85fcc90975d7ff5f2033b458 991 Pfam PF08335 GlnD PII-uridylyltransferase 852 975 9.4E-11 T 31-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 DY252_14805 eb9ebf9c85fcc90975d7ff5f2033b458 991 Pfam PF08335 GlnD PII-uridylyltransferase 321 462 2.8E-39 T 31-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 DY252_14805 eb9ebf9c85fcc90975d7ff5f2033b458 991 SUPERFAMILY SSF81593 829 977 3.53E-31 T 31-10-2018 DY252_14805 eb9ebf9c85fcc90975d7ff5f2033b458 991 SUPERFAMILY SSF81301 548 826 3.07E-67 T 31-10-2018 DY252_14805 eb9ebf9c85fcc90975d7ff5f2033b458 991 SUPERFAMILY SSF81593 311 462 7.38E-39 T 31-10-2018 DY252_14805 eb9ebf9c85fcc90975d7ff5f2033b458 991 SUPERFAMILY SSF81301 43 309 9.81E-62 T 31-10-2018 DY252_14805 eb9ebf9c85fcc90975d7ff5f2033b458 991 Gene3D G3DSA:3.30.460.100 583 825 1.0E-63 T 31-10-2018 DY252_14805 eb9ebf9c85fcc90975d7ff5f2033b458 991 Gene3D G3DSA:3.30.460.100 62 304 3.0E-58 T 31-10-2018 DY252_14805 eb9ebf9c85fcc90975d7ff5f2033b458 991 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 50 964 16.624 T 31-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 DY252_14805 eb9ebf9c85fcc90975d7ff5f2033b458 991 Gene3D G3DSA:1.20.120.330 830 980 2.1E-24 T 31-10-2018 DY252_14805 eb9ebf9c85fcc90975d7ff5f2033b458 991 Gene3D G3DSA:1.20.120.330 308 466 6.1E-48 T 31-10-2018 DY252_18660 8783c5d9951ac3d6a4adf37f47fa0c23 278 SUPERFAMILY SSF81324 12 221 5.41E-30 T 31-10-2018 DY252_18660 8783c5d9951ac3d6a4adf37f47fa0c23 278 Gene3D G3DSA:1.20.120.350 3 113 1.5E-28 T 31-10-2018 IPR027359 Voltage-dependent channel domain superfamily DY252_18660 8783c5d9951ac3d6a4adf37f47fa0c23 278 Pfam PF00520 Ion transport protein 13 221 2.6E-37 T 31-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 DY252_18660 8783c5d9951ac3d6a4adf37f47fa0c23 278 Gene3D G3DSA:1.10.287.70 114 212 1.4E-35 T 31-10-2018 DY252_17240 95f0001239278e2b19d82b30eb7dbc10 654 SUPERFAMILY SSF48452 70 233 3.29E-15 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_17240 95f0001239278e2b19d82b30eb7dbc10 654 SMART SM00028 138 171 49.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_17240 95f0001239278e2b19d82b30eb7dbc10 654 SMART SM00028 172 205 39.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_17240 95f0001239278e2b19d82b30eb7dbc10 654 SMART SM00028 98 137 66.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_17240 95f0001239278e2b19d82b30eb7dbc10 654 Pfam PF00263 Bacterial type II and III secretion system protein 409 565 4.6E-31 T 31-10-2018 IPR004846 Type II/III secretion system GO:0009306 DY252_17240 95f0001239278e2b19d82b30eb7dbc10 654 Gene3D G3DSA:1.25.40.10 72 270 1.9E-18 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_10255 4273094a79bbed2136b7c9a4f28d3d21 288 Pfam PF05013 N-formylglutamate amidohydrolase 25 255 1.3E-67 T 31-10-2018 IPR007709 N-formylglutamate amidohydrolase DY252_10255 4273094a79bbed2136b7c9a4f28d3d21 288 Gene3D G3DSA:3.40.630.40 5 284 1.2E-101 T 31-10-2018 DY252_10255 4273094a79bbed2136b7c9a4f28d3d21 288 SUPERFAMILY SSF53187 14 282 5.65E-84 T 31-10-2018 DY252_10445 72d5868f2b8ffbc00867aaedc993b111 281 SUPERFAMILY SSF161098 14 265 4.95E-47 T 31-10-2018 IPR035906 MetI-like superfamily DY252_10445 72d5868f2b8ffbc00867aaedc993b111 281 Gene3D G3DSA:1.10.3720.10 11 275 2.9E-54 T 31-10-2018 IPR035906 MetI-like superfamily DY252_10445 72d5868f2b8ffbc00867aaedc993b111 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 268 1.5E-12 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_14740 0cd8922ce5f50e946bd7435efce2229f 111 Gene3D G3DSA:3.10.20.30 2 111 4.1E-44 T 31-10-2018 IPR012675 Beta-grasp domain superfamily DY252_14740 0cd8922ce5f50e946bd7435efce2229f 111 PRINTS PR00355 Adrenodoxin signature 58 72 4.0E-12 T 31-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DY252_14740 0cd8922ce5f50e946bd7435efce2229f 111 PRINTS PR00355 Adrenodoxin signature 39 49 4.0E-12 T 31-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DY252_14740 0cd8922ce5f50e946bd7435efce2229f 111 PRINTS PR00355 Adrenodoxin signature 81 89 4.0E-12 T 31-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DY252_14740 0cd8922ce5f50e946bd7435efce2229f 111 SUPERFAMILY SSF54292 1 101 1.79E-34 T 31-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DY252_14740 0cd8922ce5f50e946bd7435efce2229f 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 89 9.4E-17 T 31-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DY252_14740 0cd8922ce5f50e946bd7435efce2229f 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 39 49 - T 31-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DY252_10500 73680aca05621d69c56eabd7bf5ec41e 301 SUPERFAMILY SSF103481 43 148 1.57E-7 T 31-10-2018 DY252_10500 73680aca05621d69c56eabd7bf5ec41e 301 SUPERFAMILY SSF103481 190 285 2.75E-7 T 31-10-2018 DY252_10500 73680aca05621d69c56eabd7bf5ec41e 301 Pfam PF00892 EamA-like transporter family 155 280 3.1E-7 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_10500 73680aca05621d69c56eabd7bf5ec41e 301 Pfam PF00892 EamA-like transporter family 35 144 3.3E-9 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_19150 278047977955fb0e75e041aebe1be075 342 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 34 313 3.5E-34 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_19150 278047977955fb0e75e041aebe1be075 342 Gene3D G3DSA:3.40.190.170 27 341 1.0E-77 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_07790 aee4b29ef97be8a54abe962f578a2448 549 SUPERFAMILY SSF53041 3 145 2.88E-26 T 31-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 DY252_07790 aee4b29ef97be8a54abe962f578a2448 549 Pfam PF13408 Recombinase zinc beta ribbon domain 319 369 3.0E-8 T 31-10-2018 IPR025827 Recombinase zinc beta ribbon domain DY252_07790 aee4b29ef97be8a54abe962f578a2448 549 Gene3D G3DSA:1.10.10.2600 130 289 3.6E-10 T 31-10-2018 IPR038109 DNA-binding recombinase domain superfamily DY252_07790 aee4b29ef97be8a54abe962f578a2448 549 SMART SM00857 4 146 1.0E-39 T 31-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DY252_07790 aee4b29ef97be8a54abe962f578a2448 549 Gene3D G3DSA:3.40.50.1390 2 125 8.9E-27 T 31-10-2018 DY252_07790 aee4b29ef97be8a54abe962f578a2448 549 Pfam PF07508 Recombinase 177 289 7.2E-18 T 31-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 DY252_07790 aee4b29ef97be8a54abe962f578a2448 549 Pfam PF00239 Resolvase, N terminal domain 5 145 9.6E-28 T 31-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DY252_16025 2410ff7b830f105feeb83cf6ec1e45d6 172 Pfam PF08281 Sigma-70, region 4 110 161 4.3E-13 T 31-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DY252_16025 2410ff7b830f105feeb83cf6ec1e45d6 172 SUPERFAMILY SSF88659 93 167 3.49E-13 T 31-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DY252_16025 2410ff7b830f105feeb83cf6ec1e45d6 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 165 7.7E-24 T 31-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DY252_16025 2410ff7b830f105feeb83cf6ec1e45d6 172 Gene3D G3DSA:1.10.1740.10 5 73 4.2E-6 T 31-10-2018 DY252_16025 2410ff7b830f105feeb83cf6ec1e45d6 172 SUPERFAMILY SSF88946 7 79 3.73E-9 T 31-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DY252_16025 2410ff7b830f105feeb83cf6ec1e45d6 172 Pfam PF04542 Sigma-70 region 2 11 75 1.8E-7 T 31-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DY252_16025 2410ff7b830f105feeb83cf6ec1e45d6 172 Gene3D G3DSA:1.10.10.10 89 168 5.1E-15 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_01550 3b4e15e10d89a778a4d5bc9ba563cf29 215 Gene3D G3DSA:3.30.1370.110 83 215 1.2E-38 T 31-10-2018 DY252_01550 3b4e15e10d89a778a4d5bc9ba563cf29 215 SUPERFAMILY SSF160443 123 211 3.4E-15 T 31-10-2018 IPR036063 Smr domain superfamily DY252_01550 3b4e15e10d89a778a4d5bc9ba563cf29 215 SMART SM00463 122 211 1.8E-7 T 31-10-2018 IPR002625 Smr domain DY252_01550 3b4e15e10d89a778a4d5bc9ba563cf29 215 Pfam PF01713 Smr domain 125 211 1.4E-23 T 31-10-2018 IPR002625 Smr domain DY252_02240 cf23f71a7ff8ff03a1e41b91516681df 297 Gene3D G3DSA:3.40.50.720 2 274 2.7E-73 T 31-10-2018 DY252_02240 cf23f71a7ff8ff03a1e41b91516681df 297 Pfam PF00106 short chain dehydrogenase 7 197 1.4E-34 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02240 cf23f71a7ff8ff03a1e41b91516681df 297 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_02240 cf23f71a7ff8ff03a1e41b91516681df 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 4.3E-15 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02240 cf23f71a7ff8ff03a1e41b91516681df 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 4.3E-15 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02240 cf23f71a7ff8ff03a1e41b91516681df 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 4.3E-15 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02240 cf23f71a7ff8ff03a1e41b91516681df 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.3E-15 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02240 cf23f71a7ff8ff03a1e41b91516681df 297 SUPERFAMILY SSF51735 1 241 5.79E-55 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_11660 a1888ea83c93531c310bd8a32d314801 174 SMART SM00732 17 117 5.0E-27 T 31-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 DY252_11660 a1888ea83c93531c310bd8a32d314801 174 Pfam PF03652 Holliday junction resolvase 18 150 1.0E-37 T 31-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DY252_11660 a1888ea83c93531c310bd8a32d314801 174 Gene3D G3DSA:3.30.420.140 16 160 2.5E-40 T 31-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 DY252_11660 a1888ea83c93531c310bd8a32d314801 174 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 20 150 4.2E-28 T 31-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DY252_11660 a1888ea83c93531c310bd8a32d314801 174 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 17 153 23.209 T 31-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DY252_11660 a1888ea83c93531c310bd8a32d314801 174 SUPERFAMILY SSF53098 18 153 2.12E-36 T 31-10-2018 IPR012337 Ribonuclease H-like superfamily DY252_07185 bab7a894abe2041a0bc49e5bd92fb947 303 Pfam PF03466 LysR substrate binding domain 89 294 2.9E-44 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_07185 bab7a894abe2041a0bc49e5bd92fb947 303 Gene3D G3DSA:1.10.10.10 3 86 6.0E-25 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_07185 bab7a894abe2041a0bc49e5bd92fb947 303 Gene3D G3DSA:3.40.190.290 91 293 1.0E-64 T 31-10-2018 DY252_07185 bab7a894abe2041a0bc49e5bd92fb947 303 SUPERFAMILY SSF46785 4 84 6.93E-19 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_07185 bab7a894abe2041a0bc49e5bd92fb947 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.1E-16 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_07185 bab7a894abe2041a0bc49e5bd92fb947 303 SUPERFAMILY SSF53850 90 297 1.18E-46 T 31-10-2018 DY252_01035 9ba0e879979748876081b9b8c9d49eef 146 Gene3D G3DSA:1.10.10.10 9 91 8.1E-25 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_01035 9ba0e879979748876081b9b8c9d49eef 146 Pfam PF01475 Ferric uptake regulator family 18 114 1.8E-20 T 31-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DY252_01035 9ba0e879979748876081b9b8c9d49eef 146 SUPERFAMILY SSF46785 10 135 7.62E-28 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_13895 6c194550e99fe2b6780e300dd44e8067 656 Pfam PF08443 RimK-like ATP-grasp domain 454 647 7.9E-8 T 31-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 DY252_13895 6c194550e99fe2b6780e300dd44e8067 656 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 197 344 3.5E-36 T 31-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain DY252_13895 6c194550e99fe2b6780e300dd44e8067 656 SUPERFAMILY SSF55729 3 145 1.89E-29 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_13895 6c194550e99fe2b6780e300dd44e8067 656 Gene3D G3DSA:3.30.1490.20 455 536 1.2E-7 T 31-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DY252_13895 6c194550e99fe2b6780e300dd44e8067 656 Gene3D G3DSA:3.40.630.30 3 161 5.0E-32 T 31-10-2018 DY252_13895 6c194550e99fe2b6780e300dd44e8067 656 Gene3D G3DSA:3.30.470.20 537 653 4.4E-16 T 31-10-2018 DY252_13895 6c194550e99fe2b6780e300dd44e8067 656 Pfam PF00583 Acetyltransferase (GNAT) family 40 135 2.9E-16 T 31-10-2018 IPR000182 GNAT domain DY252_13895 6c194550e99fe2b6780e300dd44e8067 656 SUPERFAMILY SSF56059 445 653 2.05E-36 T 31-10-2018 DY252_13200 1aaf1a578a0fb1a2e06a1c3a746da57c 120 Pfam PF04977 Septum formation initiator 23 100 7.3E-13 T 31-10-2018 IPR007060 Septum formation initiator FtsL/DivIC DY252_08845 3296433dca964ed444aa96ba658ec546 423 PIRSF PIRSF006066 1 423 1.2E-110 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_08845 3296433dca964ed444aa96ba658ec546 423 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 420 2.1E-109 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_08845 3296433dca964ed444aa96ba658ec546 423 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 411 2.4E-103 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_01160 c8410893c0e294f16306b292e641ed20 186 PIRSF PIRSF026671 1 181 1.6E-50 T 31-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 DY252_01160 c8410893c0e294f16306b292e641ed20 186 Gene3D G3DSA:3.30.1380.10 1 174 6.7E-50 T 31-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DY252_01160 c8410893c0e294f16306b292e641ed20 186 Pfam PF01427 D-ala-D-ala dipeptidase 10 169 1.6E-40 T 31-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 DY252_01160 c8410893c0e294f16306b292e641ed20 186 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 2 177 27.992 T 31-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 DY252_01160 c8410893c0e294f16306b292e641ed20 186 SUPERFAMILY SSF55166 3 171 9.68E-55 T 31-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DY252_12650 08958477f28a52bf2f19012d3c36ad4d 564 Pfam PF02872 5'-nucleotidase, C-terminal domain 397 524 5.5E-13 T 31-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_12650 08958477f28a52bf2f19012d3c36ad4d 564 Gene3D G3DSA:3.60.21.10 103 378 3.5E-85 T 31-10-2018 IPR029052 Metallo-dependent phosphatase-like DY252_12650 08958477f28a52bf2f19012d3c36ad4d 564 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 3 563 5.4E-252 T 31-10-2018 IPR030998 Thiosulfohydrolase SoxB DY252_12650 08958477f28a52bf2f19012d3c36ad4d 564 Gene3D G3DSA:3.90.780.10 379 564 4.0E-70 T 31-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_12650 08958477f28a52bf2f19012d3c36ad4d 564 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 19 1.1E-5 T 31-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DY252_12650 08958477f28a52bf2f19012d3c36ad4d 564 SUPERFAMILY SSF55816 377 563 2.75E-30 T 31-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_12650 08958477f28a52bf2f19012d3c36ad4d 564 PRINTS PR01607 Apyrase family signature 269 286 1.1E-12 T 31-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_12650 08958477f28a52bf2f19012d3c36ad4d 564 PRINTS PR01607 Apyrase family signature 316 336 1.1E-12 T 31-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_12650 08958477f28a52bf2f19012d3c36ad4d 564 PRINTS PR01607 Apyrase family signature 45 63 1.1E-12 T 31-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_12650 08958477f28a52bf2f19012d3c36ad4d 564 PRINTS PR01607 Apyrase family signature 288 311 1.1E-12 T 31-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_12650 08958477f28a52bf2f19012d3c36ad4d 564 SUPERFAMILY SSF56300 42 377 2.07E-83 T 31-10-2018 DY252_03315 e65555121e33f27ed314bec472bee0f2 285 Gene3D G3DSA:3.40.50.1820 4 285 2.9E-96 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_03315 e65555121e33f27ed314bec472bee0f2 285 SUPERFAMILY SSF53474 3 283 8.76E-93 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_03315 e65555121e33f27ed314bec472bee0f2 285 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 7 282 1.6E-122 T 31-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 DY252_03315 e65555121e33f27ed314bec472bee0f2 285 Pfam PF00756 Putative esterase 25 275 3.6E-66 T 31-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 DY252_00205 651874ba1a0a4eaa48576858176acd04 459 SUPERFAMILY SSF53383 12 447 5.89E-117 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_00205 651874ba1a0a4eaa48576858176acd04 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 255 292 - T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_00205 651874ba1a0a4eaa48576858176acd04 459 Gene3D G3DSA:3.90.1150.10 12 447 2.3E-162 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_00205 651874ba1a0a4eaa48576858176acd04 459 PIRSF PIRSF000521 33 449 2.1E-25 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_00205 651874ba1a0a4eaa48576858176acd04 459 Pfam PF00202 Aminotransferase class-III 31 446 8.2E-94 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_00205 651874ba1a0a4eaa48576858176acd04 459 Gene3D G3DSA:3.40.640.10 66 345 2.3E-162 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_21795 c45ffbaf42afa3050e1ed2add1d13751 454 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 261 417 1.5E-21 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_21795 c45ffbaf42afa3050e1ed2add1d13751 454 SMART SM00044 228 426 1.8E-6 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_21795 c45ffbaf42afa3050e1ed2add1d13751 454 SUPERFAMILY SSF55073 259 449 1.1E-44 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_21795 c45ffbaf42afa3050e1ed2add1d13751 454 Gene3D G3DSA:3.30.70.1230 256 452 3.3E-46 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_09965 d57096fa5c63588a94041fb612d06a38 217 Gene3D G3DSA:3.30.1020.20 153 217 1.4E-19 T 31-10-2018 DY252_09965 d57096fa5c63588a94041fb612d06a38 217 Hamap MF_00401 Peroxiredoxin. 12 217 41.573 T 31-10-2018 IPR022915 Peroxiredoxin, TDXH subfamily GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DY252_09965 d57096fa5c63588a94041fb612d06a38 217 Pfam PF00578 AhpC/TSA family 14 143 4.8E-37 T 31-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DY252_09965 d57096fa5c63588a94041fb612d06a38 217 PIRSF PIRSF000239 8 214 9.3E-78 T 31-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DY252_09965 d57096fa5c63588a94041fb612d06a38 217 Gene3D G3DSA:3.40.30.10 12 152 7.9E-51 T 31-10-2018 DY252_09965 d57096fa5c63588a94041fb612d06a38 217 SUPERFAMILY SSF52833 12 215 7.33E-71 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_09965 d57096fa5c63588a94041fb612d06a38 217 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 164 199 4.2E-15 T 31-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DY252_04075 2364af7817c1f5ff3a00ccd8f0284129 225 Pfam PF00005 ABC transporter 21 168 1.0E-31 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_04075 2364af7817c1f5ff3a00ccd8f0284129 225 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 4 215 5.4E-82 T 31-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 DY252_04075 2364af7817c1f5ff3a00ccd8f0284129 225 SUPERFAMILY SSF52540 5 222 5.74E-63 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_04075 2364af7817c1f5ff3a00ccd8f0284129 225 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_04075 2364af7817c1f5ff3a00ccd8f0284129 225 Gene3D G3DSA:3.40.50.300 2 224 2.3E-60 T 31-10-2018 DY252_04075 2364af7817c1f5ff3a00ccd8f0284129 225 SMART SM00382 30 216 6.8E-8 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_17490 aa53ee45be607cbd8362d90dad026e41 422 Gene3D G3DSA:3.30.9.10 118 341 1.2E-74 T 31-10-2018 DY252_17490 aa53ee45be607cbd8362d90dad026e41 422 Gene3D G3DSA:3.50.50.60 29 378 1.2E-74 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_17490 aa53ee45be607cbd8362d90dad026e41 422 Pfam PF01266 FAD dependent oxidoreductase 29 378 3.2E-57 T 31-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DY252_17490 aa53ee45be607cbd8362d90dad026e41 422 SUPERFAMILY SSF51905 28 406 3.69E-43 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_07890 8542f57dec726812d1ff4107a017dac7 365 Gene3D G3DSA:2.40.50.140 290 349 3.8E-8 T 31-10-2018 DY252_07890 8542f57dec726812d1ff4107a017dac7 365 Gene3D G3DSA:3.40.50.300 2 217 8.8E-62 T 31-10-2018 DY252_07890 8542f57dec726812d1ff4107a017dac7 365 Pfam PF00005 ABC transporter 21 162 2.3E-30 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_07890 8542f57dec726812d1ff4107a017dac7 365 Gene3D G3DSA:2.40.50.940 221 352 3.8E-8 T 31-10-2018 DY252_07890 8542f57dec726812d1ff4107a017dac7 365 SMART SM00382 29 212 4.5E-18 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_07890 8542f57dec726812d1ff4107a017dac7 365 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_07890 8542f57dec726812d1ff4107a017dac7 365 SUPERFAMILY SSF52540 5 243 3.46E-80 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07890 8542f57dec726812d1ff4107a017dac7 365 SUPERFAMILY SSF50331 237 335 1.08E-8 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_21960 2409fd23c01e3930aa824e82309e8184 647 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 642 0.0 T 31-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 DY252_21960 2409fd23c01e3930aa824e82309e8184 647 Pfam PF00501 AMP-binding enzyme 82 521 2.2E-98 T 31-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DY252_21960 2409fd23c01e3930aa824e82309e8184 647 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 644 54.354 T 31-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 DY252_21960 2409fd23c01e3930aa824e82309e8184 647 Gene3D G3DSA:3.40.50.12780 50 514 8.0E-113 T 31-10-2018 DY252_21960 2409fd23c01e3930aa824e82309e8184 647 Pfam PF13193 AMP-binding enzyme C-terminal domain 530 608 8.5E-26 T 31-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DY252_21960 2409fd23c01e3930aa824e82309e8184 647 ProSitePatterns PS00455 Putative AMP-binding domain signature. 260 271 - T 31-10-2018 IPR020845 AMP-binding, conserved site DY252_21960 2409fd23c01e3930aa824e82309e8184 647 SUPERFAMILY SSF56801 13 640 1.23E-194 T 31-10-2018 DY252_21960 2409fd23c01e3930aa824e82309e8184 647 Gene3D G3DSA:3.30.300.30 517 647 3.6E-31 T 31-10-2018 DY252_21960 2409fd23c01e3930aa824e82309e8184 647 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 23 80 2.1E-20 T 31-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 DY252_12475 c435f0317802465382f99290b8dfac5a 82 Pfam PF00550 Phosphopantetheine attachment site 10 75 3.8E-10 T 31-10-2018 IPR009081 Phosphopantetheine binding ACP domain DY252_12475 c435f0317802465382f99290b8dfac5a 82 SUPERFAMILY SSF47336 3 80 4.19E-19 T 31-10-2018 IPR036736 ACP-like superfamily DY252_12475 c435f0317802465382f99290b8dfac5a 82 Gene3D G3DSA:1.10.1200.10 1 78 7.3E-17 T 31-10-2018 IPR036736 ACP-like superfamily DY252_12475 c435f0317802465382f99290b8dfac5a 82 Hamap MF_01217 Acyl carrier protein [acpP]. 6 80 13.744 T 31-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DY252_03095 d85328fc3389a854b2828c092a42c156 349 Gene3D G3DSA:3.10.129.10 1 349 3.2E-105 T 31-10-2018 DY252_03095 d85328fc3389a854b2828c092a42c156 349 SUPERFAMILY SSF54637 2 152 2.18E-38 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_03095 d85328fc3389a854b2828c092a42c156 349 Pfam PF01575 MaoC like domain 14 127 4.3E-7 T 31-10-2018 IPR002539 MaoC-like dehydratase domain DY252_03095 d85328fc3389a854b2828c092a42c156 349 Pfam PF01575 MaoC like domain 200 297 1.8E-4 T 31-10-2018 IPR002539 MaoC-like dehydratase domain DY252_03095 d85328fc3389a854b2828c092a42c156 349 PIRSF PIRSF021494 1 349 2.4E-136 T 31-10-2018 IPR016790 Thiol ester hydratase, Rv0216, predicted KEGG: 00630+4.2.1.148|KEGG: 00660+4.2.1.148|KEGG: 00720+4.2.1.148|MetaCyc: PWY-5741|MetaCyc: PWY-5744|MetaCyc: PWY-6728|MetaCyc: PWY-7854 DY252_03095 d85328fc3389a854b2828c092a42c156 349 SUPERFAMILY SSF54637 193 347 8.53E-30 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_08080 496137eadb3b2162f75fe6a81c637fe3 453 Gene3D G3DSA:3.50.50.60 173 272 6.7E-171 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_08080 496137eadb3b2162f75fe6a81c637fe3 453 SUPERFAMILY SSF51905 252 388 2.72E-9 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_08080 496137eadb3b2162f75fe6a81c637fe3 453 SUPERFAMILY SSF51905 1 242 7.12E-52 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_08080 496137eadb3b2162f75fe6a81c637fe3 453 Pfam PF00743 Flavin-binding monooxygenase-like 249 383 6.4E-10 T 31-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 DY252_08080 496137eadb3b2162f75fe6a81c637fe3 453 Pfam PF00743 Flavin-binding monooxygenase-like 4 229 6.0E-32 T 31-10-2018 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 DY252_08080 496137eadb3b2162f75fe6a81c637fe3 453 PIRSF PIRSF000332 244 391 4.7E-11 T 31-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 DY252_08080 496137eadb3b2162f75fe6a81c637fe3 453 PIRSF PIRSF000332 1 233 1.5E-34 T 31-10-2018 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 DY252_08080 496137eadb3b2162f75fe6a81c637fe3 453 Gene3D G3DSA:3.50.50.60 4 416 6.7E-171 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_19725 70f7c924c38752c9ce53181d6fbf120b 548 Pfam PF00890 FAD binding domain 9 390 4.0E-105 T 31-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_19725 70f7c924c38752c9ce53181d6fbf120b 548 SUPERFAMILY SSF56425 236 351 1.79E-43 T 31-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_19725 70f7c924c38752c9ce53181d6fbf120b 548 Gene3D G3DSA:1.20.58.100 424 539 2.3E-39 T 31-10-2018 DY252_19725 70f7c924c38752c9ce53181d6fbf120b 548 Gene3D G3DSA:3.90.700.10 246 356 3.2E-162 T 31-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_19725 70f7c924c38752c9ce53181d6fbf120b 548 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 518 7.7E-197 T 31-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 DY252_19725 70f7c924c38752c9ce53181d6fbf120b 548 PIRSF PIRSF000171 1 545 1.4E-40 T 31-10-2018 DY252_19725 70f7c924c38752c9ce53181d6fbf120b 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.3E-7 T 31-10-2018 DY252_19725 70f7c924c38752c9ce53181d6fbf120b 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 353 375 1.3E-7 T 31-10-2018 DY252_19725 70f7c924c38752c9ce53181d6fbf120b 548 SUPERFAMILY SSF46977 424 526 1.31E-29 T 31-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_19725 70f7c924c38752c9ce53181d6fbf120b 548 Pfam PF02910 Fumarate reductase flavoprotein C-term 439 523 9.4E-12 T 31-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_19725 70f7c924c38752c9ce53181d6fbf120b 548 SUPERFAMILY SSF51905 6 446 1.13E-77 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_19725 70f7c924c38752c9ce53181d6fbf120b 548 Gene3D G3DSA:3.50.50.60 9 402 3.2E-162 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_06700 b9a4c686a2c1d03afea24f07a4bd8422 359 SMART SM00073 249 341 1.7E-5 T 31-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DY252_06700 b9a4c686a2c1d03afea24f07a4bd8422 359 Gene3D G3DSA:3.40.50.2300 74 208 2.9E-35 T 31-10-2018 DY252_06700 b9a4c686a2c1d03afea24f07a4bd8422 359 Pfam PF01627 Hpt domain 261 344 9.4E-13 T 31-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DY252_06700 b9a4c686a2c1d03afea24f07a4bd8422 359 Gene3D G3DSA:1.20.120.160 231 350 2.3E-17 T 31-10-2018 IPR036641 HPT domain superfamily GO:0000160 DY252_06700 b9a4c686a2c1d03afea24f07a4bd8422 359 Pfam PF13188 PAS domain 9 40 2.0E-4 T 31-10-2018 IPR000014 PAS domain DY252_06700 b9a4c686a2c1d03afea24f07a4bd8422 359 SUPERFAMILY SSF47226 236 341 1.44E-16 T 31-10-2018 IPR036641 HPT domain superfamily GO:0000160 DY252_06700 b9a4c686a2c1d03afea24f07a4bd8422 359 SUPERFAMILY SSF52172 85 203 1.57E-33 T 31-10-2018 IPR011006 CheY-like superfamily DY252_06700 b9a4c686a2c1d03afea24f07a4bd8422 359 SMART SM00448 84 199 2.2E-32 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_06700 b9a4c686a2c1d03afea24f07a4bd8422 359 Pfam PF00072 Response regulator receiver domain 86 199 3.9E-27 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_17680 974c475d3203f16d486b4449a1158456 521 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 206 221 - T 31-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DY252_17680 974c475d3203f16d486b4449a1158456 521 Pfam PF00158 Sigma-54 interaction domain 121 286 4.6E-69 T 31-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DY252_17680 974c475d3203f16d486b4449a1158456 521 SUPERFAMILY SSF46689 458 506 6.09E-12 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_17680 974c475d3203f16d486b4449a1158456 521 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 144 157 - T 31-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DY252_17680 974c475d3203f16d486b4449a1158456 521 Pfam PF02954 Bacterial regulatory protein, Fis family 466 506 6.2E-15 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_17680 974c475d3203f16d486b4449a1158456 521 Gene3D G3DSA:3.40.50.300 113 290 3.8E-63 T 31-10-2018 DY252_17680 974c475d3203f16d486b4449a1158456 521 SUPERFAMILY SSF52172 22 164 1.32E-12 T 31-10-2018 IPR011006 CheY-like superfamily DY252_17680 974c475d3203f16d486b4449a1158456 521 SMART SM00382 140 287 8.1E-9 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_17680 974c475d3203f16d486b4449a1158456 521 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 489 509 1.9E-7 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_17680 974c475d3203f16d486b4449a1158456 521 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 472 489 1.9E-7 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_17680 974c475d3203f16d486b4449a1158456 521 Gene3D G3DSA:3.40.50.2300 2 112 1.7E-5 T 31-10-2018 DY252_17680 974c475d3203f16d486b4449a1158456 521 Gene3D G3DSA:1.10.8.60 291 368 1.1E-21 T 31-10-2018 DY252_17680 974c475d3203f16d486b4449a1158456 521 SUPERFAMILY SSF52540 120 361 6.79E-69 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_17680 974c475d3203f16d486b4449a1158456 521 Gene3D G3DSA:1.10.10.60 446 507 3.0E-14 T 31-10-2018 DY252_03320 dc3313bd592267320e30338ca528163b 374 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 31-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DY252_03320 dc3313bd592267320e30338ca528163b 374 SMART SM00829 17 372 7.4E-4 T 31-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DY252_03320 dc3313bd592267320e30338ca528163b 374 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 8 374 2.2E-221 T 31-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 DY252_03320 dc3313bd592267320e30338ca528163b 374 Gene3D G3DSA:3.90.180.10 11 369 1.9E-156 T 31-10-2018 DY252_03320 dc3313bd592267320e30338ca528163b 374 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 159 3.6E-25 T 31-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DY252_03320 dc3313bd592267320e30338ca528163b 374 SUPERFAMILY SSF50129 3 190 1.19E-77 T 31-10-2018 IPR011032 GroES-like superfamily DY252_03320 dc3313bd592267320e30338ca528163b 374 Pfam PF00107 Zinc-binding dehydrogenase 202 325 4.7E-24 T 31-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DY252_03320 dc3313bd592267320e30338ca528163b 374 SUPERFAMILY SSF50129 323 374 4.47E-12 T 31-10-2018 IPR011032 GroES-like superfamily DY252_03320 dc3313bd592267320e30338ca528163b 374 SUPERFAMILY SSF51735 165 338 1.14E-47 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_03320 dc3313bd592267320e30338ca528163b 374 Gene3D G3DSA:3.40.50.720 179 317 1.9E-156 T 31-10-2018 DY252_02915 d5660a3ac5f8c2a5a1949867c38dbe5c 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_02915 d5660a3ac5f8c2a5a1949867c38dbe5c 253 Pfam PF00106 short chain dehydrogenase 7 202 5.2E-47 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02915 d5660a3ac5f8c2a5a1949867c38dbe5c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 6.1E-26 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02915 d5660a3ac5f8c2a5a1949867c38dbe5c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 6.1E-26 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02915 d5660a3ac5f8c2a5a1949867c38dbe5c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 6.1E-26 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02915 d5660a3ac5f8c2a5a1949867c38dbe5c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 6.1E-26 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02915 d5660a3ac5f8c2a5a1949867c38dbe5c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.1E-26 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02915 d5660a3ac5f8c2a5a1949867c38dbe5c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 3.5E-9 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02915 d5660a3ac5f8c2a5a1949867c38dbe5c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 3.5E-9 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02915 d5660a3ac5f8c2a5a1949867c38dbe5c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.5E-9 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02915 d5660a3ac5f8c2a5a1949867c38dbe5c 253 SUPERFAMILY SSF51735 3 247 7.28E-63 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_02915 d5660a3ac5f8c2a5a1949867c38dbe5c 253 Gene3D G3DSA:3.40.50.720 1 252 7.3E-75 T 31-10-2018 DY252_16015 61d87375aff89f54f183f015f02f9d39 817 Gene3D G3DSA:2.40.170.20 288 817 1.7E-76 T 31-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DY252_16015 61d87375aff89f54f183f015f02f9d39 817 Gene3D G3DSA:2.170.130.10 149 285 7.6E-23 T 31-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DY252_16015 61d87375aff89f54f183f015f02f9d39 817 SUPERFAMILY SSF56935 165 817 4.03E-101 T 31-10-2018 DY252_16015 61d87375aff89f54f183f015f02f9d39 817 Pfam PF00593 TonB dependent receptor 375 814 2.2E-32 T 31-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DY252_16015 61d87375aff89f54f183f015f02f9d39 817 Pfam PF07715 TonB-dependent Receptor Plug Domain 173 275 3.8E-14 T 31-10-2018 IPR012910 TonB-dependent receptor, plug domain DY252_16015 61d87375aff89f54f183f015f02f9d39 817 Gene3D G3DSA:3.55.50.30 45 148 3.5E-11 T 31-10-2018 DY252_16015 61d87375aff89f54f183f015f02f9d39 817 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 175 817 1.9E-109 T 31-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DY252_10985 b672de1a8e72500467ebca858cb5f43b 230 Gene3D G3DSA:3.30.1330.60 57 228 3.8E-36 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_10985 b672de1a8e72500467ebca858cb5f43b 230 Pfam PF00691 OmpA family 107 201 1.4E-14 T 31-10-2018 IPR006665 OmpA-like domain DY252_10985 b672de1a8e72500467ebca858cb5f43b 230 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 10 56 2.2E-14 T 31-10-2018 IPR025713 Motility protein B, N-terminal domain DY252_10985 b672de1a8e72500467ebca858cb5f43b 230 SUPERFAMILY SSF103088 95 224 1.14E-24 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_18115 4adda1c216e0067e92f55b18e157c276 265 SMART SM01134 74 238 3.0E-45 T 31-10-2018 DY252_18115 4adda1c216e0067e92f55b18e157c276 265 Gene3D G3DSA:1.10.10.10 2 56 1.2E-7 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_18115 4adda1c216e0067e92f55b18e157c276 265 SMART SM00420 8 60 6.6E-14 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_18115 4adda1c216e0067e92f55b18e157c276 265 SUPERFAMILY SSF100950 81 239 3.43E-25 T 31-10-2018 IPR037171 NagB/RpiA transferase-like DY252_18115 4adda1c216e0067e92f55b18e157c276 265 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 31-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DY252_18115 4adda1c216e0067e92f55b18e157c276 265 Pfam PF08220 DeoR-like helix-turn-helix domain 8 59 1.9E-15 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_18115 4adda1c216e0067e92f55b18e157c276 265 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 9.3E-8 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_18115 4adda1c216e0067e92f55b18e157c276 265 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 9.3E-8 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_18115 4adda1c216e0067e92f55b18e157c276 265 SUPERFAMILY SSF46785 6 69 2.98E-11 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_18115 4adda1c216e0067e92f55b18e157c276 265 Pfam PF00455 DeoR C terminal sensor domain 81 237 2.7E-37 T 31-10-2018 IPR014036 DeoR C-terminal sensor domain DY252_00815 c62b1252f1509ce7a74d72b0a6e96169 270 SUPERFAMILY SSF53335 20 260 7.17E-32 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_00815 c62b1252f1509ce7a74d72b0a6e96169 270 Gene3D G3DSA:3.40.50.150 50 260 1.5E-44 T 31-10-2018 DY252_00815 c62b1252f1509ce7a74d72b0a6e96169 270 Gene3D G3DSA:2.20.25.570 151 228 1.5E-44 T 31-10-2018 DY252_00815 c62b1252f1509ce7a74d72b0a6e96169 270 Pfam PF13649 Methyltransferase domain 52 143 5.3E-17 T 31-10-2018 DY252_05960 52da4d8e61a0fe475b2db1ff0f186dde 267 Gene3D G3DSA:2.60.120.10 40 183 6.2E-30 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_05960 52da4d8e61a0fe475b2db1ff0f186dde 267 SUPERFAMILY SSF51206 47 178 1.31E-26 T 31-10-2018 IPR018490 Cyclic nucleotide-binding-like DY252_05960 52da4d8e61a0fe475b2db1ff0f186dde 267 Pfam PF13545 Crp-like helix-turn-helix domain 193 264 2.8E-13 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_05960 52da4d8e61a0fe475b2db1ff0f186dde 267 SUPERFAMILY SSF46785 193 266 4.97E-10 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_05960 52da4d8e61a0fe475b2db1ff0f186dde 267 Pfam PF00027 Cyclic nucleotide-binding domain 75 159 7.1E-16 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_05960 52da4d8e61a0fe475b2db1ff0f186dde 267 Gene3D G3DSA:1.10.10.10 184 267 2.3E-12 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_05960 52da4d8e61a0fe475b2db1ff0f186dde 267 SMART SM00100 55 173 1.4E-14 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_05960 52da4d8e61a0fe475b2db1ff0f186dde 267 SMART SM00419 214 258 8.7E-4 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_12530 450762f4d68b78365d80dbc6e15214a5 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 189 2.8E-5 T 31-10-2018 DY252_12530 450762f4d68b78365d80dbc6e15214a5 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 2.9E-114 T 31-10-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DY252_12530 450762f4d68b78365d80dbc6e15214a5 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.3E-39 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_12530 450762f4d68b78365d80dbc6e15214a5 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.3E-39 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_12530 450762f4d68b78365d80dbc6e15214a5 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.3E-39 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_12530 450762f4d68b78365d80dbc6e15214a5 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.3E-39 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_12530 450762f4d68b78365d80dbc6e15214a5 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.3E-39 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_12530 450762f4d68b78365d80dbc6e15214a5 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 3.3E-39 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_12530 450762f4d68b78365d80dbc6e15214a5 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 1.6E-58 T 31-10-2018 DY252_12530 450762f4d68b78365d80dbc6e15214a5 241 Gene3D G3DSA:3.40.50.720 1 241 4.4E-77 T 31-10-2018 DY252_12530 450762f4d68b78365d80dbc6e15214a5 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.0E-6 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_12530 450762f4d68b78365d80dbc6e15214a5 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.0E-6 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_12530 450762f4d68b78365d80dbc6e15214a5 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.0E-6 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_12530 450762f4d68b78365d80dbc6e15214a5 241 SUPERFAMILY SSF51735 3 240 3.44E-73 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 SUPERFAMILY SSF82693 576 682 6.8E-25 T 31-10-2018 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 SUPERFAMILY SSF82714 733 819 2.49E-20 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.1E-86 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.1E-86 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 PRINTS PR00702 Acriflavin resistance protein family signature 563 580 1.1E-86 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 PRINTS PR00702 Acriflavin resistance protein family signature 395 419 1.1E-86 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 PRINTS PR00702 Acriflavin resistance protein family signature 367 388 1.1E-86 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 1.1E-86 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 1.1E-86 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 1.1E-86 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 PRINTS PR00702 Acriflavin resistance protein family signature 340 363 1.1E-86 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 Gene3D G3DSA:3.30.70.1320 136 336 0.0 T 31-10-2018 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 Gene3D G3DSA:3.30.70.1440 680 877 0.0 T 31-10-2018 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 Gene3D G3DSA:1.20.1640.10 524 1034 0.0 T 31-10-2018 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 SUPERFAMILY SSF82693 42 134 5.23E-25 T 31-10-2018 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 SUPERFAMILY SSF82866 300 501 2.62E-52 T 31-10-2018 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 Gene3D G3DSA:3.30.2090.10 732 820 0.0 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 SUPERFAMILY SSF82693 683 868 1.83E-28 T 31-10-2018 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 SUPERFAMILY SSF82693 139 334 7.15E-27 T 31-10-2018 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 Pfam PF00873 AcrB/AcrD/AcrF family 5 1038 0.0 T 31-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 SUPERFAMILY SSF82714 186 275 3.53E-21 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 Gene3D G3DSA:3.30.2090.10 182 279 0.0 T 31-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 Gene3D G3DSA:1.20.1640.10 11 523 0.0 T 31-10-2018 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 Gene3D G3DSA:3.30.70.1430 578 679 0.0 T 31-10-2018 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1043 0.0 T 31-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 Gene3D G3DSA:3.30.70.1430 41 828 0.0 T 31-10-2018 DY252_02690 2344c3310665dbe49016c1ff99809a38 1059 SUPERFAMILY SSF82866 842 1037 1.44E-45 T 31-10-2018 DY252_21930 5cefc9f531f37404aa74838f9cf22658 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.6E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_21930 5cefc9f531f37404aa74838f9cf22658 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.6E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_21930 5cefc9f531f37404aa74838f9cf22658 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.6E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_21930 5cefc9f531f37404aa74838f9cf22658 327 SUPERFAMILY SSF53850 90 295 1.1E-48 T 31-10-2018 DY252_21930 5cefc9f531f37404aa74838f9cf22658 327 Gene3D G3DSA:1.10.10.10 3 89 4.0E-28 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_21930 5cefc9f531f37404aa74838f9cf22658 327 SUPERFAMILY SSF46785 7 112 2.04E-24 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_21930 5cefc9f531f37404aa74838f9cf22658 327 Gene3D G3DSA:3.40.190.10 91 290 4.9E-75 T 31-10-2018 DY252_21930 5cefc9f531f37404aa74838f9cf22658 327 Pfam PF03466 LysR substrate binding domain 89 292 4.6E-49 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_21930 5cefc9f531f37404aa74838f9cf22658 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.2E-20 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_21930 5cefc9f531f37404aa74838f9cf22658 327 Gene3D G3DSA:3.40.190.10 163 263 4.9E-75 T 31-10-2018 DY252_19285 d69e1198b9474d5001f19dfa6b1a614a 153 SUPERFAMILY SSF54637 2 138 2.88E-28 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_19285 d69e1198b9474d5001f19dfa6b1a614a 153 Gene3D G3DSA:3.10.129.10 3 146 6.2E-30 T 31-10-2018 DY252_19285 d69e1198b9474d5001f19dfa6b1a614a 153 Pfam PF03061 Thioesterase superfamily 20 104 2.4E-6 T 31-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DY252_18270 a8a64b40bd1690f34ce5768f9119ba15 427 Gene3D G3DSA:3.30.470.20 189 327 3.9E-56 T 31-10-2018 DY252_18270 a8a64b40bd1690f34ce5768f9119ba15 427 SMART SM01209 101 294 1.3E-129 T 31-10-2018 DY252_18270 a8a64b40bd1690f34ce5768f9119ba15 427 SMART SM01210 328 422 4.6E-51 T 31-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DY252_18270 a8a64b40bd1690f34ce5768f9119ba15 427 Gene3D G3DSA:3.30.1490.20 119 188 1.4E-27 T 31-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DY252_18270 a8a64b40bd1690f34ce5768f9119ba15 427 SUPERFAMILY SSF52440 1 101 2.59E-34 T 31-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DY252_18270 a8a64b40bd1690f34ce5768f9119ba15 427 SUPERFAMILY SSF56059 102 324 4.77E-63 T 31-10-2018 DY252_18270 a8a64b40bd1690f34ce5768f9119ba15 427 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 294 4.2E-80 T 31-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DY252_18270 a8a64b40bd1690f34ce5768f9119ba15 427 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 288 295 - T 31-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DY252_18270 a8a64b40bd1690f34ce5768f9119ba15 427 Gene3D G3DSA:3.40.50.20 1 93 3.8E-36 T 31-10-2018 DY252_18270 a8a64b40bd1690f34ce5768f9119ba15 427 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 42.708 T 31-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DY252_18270 a8a64b40bd1690f34ce5768f9119ba15 427 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 420 1.2E-28 T 31-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DY252_18270 a8a64b40bd1690f34ce5768f9119ba15 427 SUPERFAMILY SSF51246 327 422 2.83E-30 T 31-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DY252_18270 a8a64b40bd1690f34ce5768f9119ba15 427 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 8.7E-35 T 31-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DY252_18270 a8a64b40bd1690f34ce5768f9119ba15 427 Gene3D G3DSA:3.90.600.10 328 427 1.2E-33 T 31-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DY252_18270 a8a64b40bd1690f34ce5768f9119ba15 427 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 422 1.0E-169 T 31-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DY252_17175 826db09c72320272d6222ca1de61076c 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 4.7E-13 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_17175 826db09c72320272d6222ca1de61076c 212 SUPERFAMILY SSF48498 86 203 2.8E-7 T 31-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DY252_17175 826db09c72320272d6222ca1de61076c 212 SUPERFAMILY SSF46689 9 87 2.1E-17 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_17175 826db09c72320272d6222ca1de61076c 212 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 156 202 8.2E-7 T 31-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type DY252_17175 826db09c72320272d6222ca1de61076c 212 Gene3D G3DSA:1.10.357.10 71 209 4.7E-30 T 31-10-2018 DY252_17175 826db09c72320272d6222ca1de61076c 212 Gene3D G3DSA:1.10.10.60 1 64 1.2E-16 T 31-10-2018 DY252_17175 826db09c72320272d6222ca1de61076c 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 2.6E-6 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_17175 826db09c72320272d6222ca1de61076c 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 2.6E-6 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_00985 15057cc59c76d7f54263bf8301b31fb4 206 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 24 38 1.7E-5 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_00985 15057cc59c76d7f54263bf8301b31fb4 206 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 54 1.7E-5 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_00985 15057cc59c76d7f54263bf8301b31fb4 206 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 63 7.5E-15 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_00985 15057cc59c76d7f54263bf8301b31fb4 206 Gene3D G3DSA:1.10.10.10 2 65 1.4E-16 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_00985 15057cc59c76d7f54263bf8301b31fb4 206 Gene3D G3DSA:1.20.120.530 69 203 8.3E-31 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_00985 15057cc59c76d7f54263bf8301b31fb4 206 SUPERFAMILY SSF46785 5 68 5.24E-15 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_00985 15057cc59c76d7f54263bf8301b31fb4 206 Pfam PF07729 FCD domain 74 193 1.4E-24 T 31-10-2018 IPR011711 GntR, C-terminal DY252_00985 15057cc59c76d7f54263bf8301b31fb4 206 SMART SM00895 74 195 2.1E-17 T 31-10-2018 IPR011711 GntR, C-terminal DY252_00985 15057cc59c76d7f54263bf8301b31fb4 206 SUPERFAMILY SSF48008 70 200 1.39E-25 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_00985 15057cc59c76d7f54263bf8301b31fb4 206 SMART SM00345 6 64 1.3E-8 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_04575 e70f0b1430242dcadfd4db77fca9bb0b 163 PIRSF PIRSF019239 2 163 7.0E-42 T 31-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 DY252_04575 e70f0b1430242dcadfd4db77fca9bb0b 163 Pfam PF01899 Na+/H+ ion antiporter subunit 13 161 1.6E-40 T 31-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 DY252_08675 30fe2254fa88904c0bf7875a4846add3 204 SUPERFAMILY SSF55811 18 200 1.62E-44 T 31-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DY252_08675 30fe2254fa88904c0bf7875a4846add3 204 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 24 196 2.3E-38 T 31-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 DY252_08675 30fe2254fa88904c0bf7875a4846add3 204 Gene3D G3DSA:3.90.79.10 13 202 1.0E-52 T 31-10-2018 DY252_08675 30fe2254fa88904c0bf7875a4846add3 204 Pfam PF00293 NUDIX domain 55 161 4.7E-8 T 31-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DY252_19650 46cc25b9c5d5017b43172e60ae71ebd9 198 Pfam PF13462 Thioredoxin 30 188 5.8E-40 T 31-10-2018 IPR012336 Thioredoxin-like fold DY252_19650 46cc25b9c5d5017b43172e60ae71ebd9 198 Gene3D G3DSA:3.40.30.10 18 198 6.2E-41 T 31-10-2018 DY252_19650 46cc25b9c5d5017b43172e60ae71ebd9 198 SUPERFAMILY SSF52833 30 194 2.08E-36 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_01685 17b07a077c025960e889c761fa06e874 229 SMART SM00448 5 117 6.1E-39 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_01685 17b07a077c025960e889c761fa06e874 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 227 2.0E-21 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_01685 17b07a077c025960e889c761fa06e874 229 SUPERFAMILY SSF52172 4 154 5.83E-39 T 31-10-2018 IPR011006 CheY-like superfamily DY252_01685 17b07a077c025960e889c761fa06e874 229 SMART SM00862 152 227 8.2E-20 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_01685 17b07a077c025960e889c761fa06e874 229 Pfam PF00072 Response regulator receiver domain 7 118 2.6E-27 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_01685 17b07a077c025960e889c761fa06e874 229 SUPERFAMILY SSF46894 126 228 8.5E-20 T 31-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DY252_01685 17b07a077c025960e889c761fa06e874 229 Gene3D G3DSA:1.10.10.10 131 229 2.6E-22 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_01685 17b07a077c025960e889c761fa06e874 229 Gene3D G3DSA:3.40.50.2300 1 130 1.5E-36 T 31-10-2018 DY252_01385 e58ac6dda755b81748265341a894053e 503 SUPERFAMILY SSF52540 189 498 1.18E-47 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_01385 e58ac6dda755b81748265341a894053e 503 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 497 6.5E-30 T 31-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain DY252_01385 e58ac6dda755b81748265341a894053e 503 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 497 1.4E-173 T 31-10-2018 IPR004482 Mg chelatase-related protein DY252_01385 e58ac6dda755b81748265341a894053e 503 Gene3D G3DSA:3.40.50.300 190 502 3.8E-61 T 31-10-2018 DY252_01385 e58ac6dda755b81748265341a894053e 503 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 141 2.2E-40 T 31-10-2018 DY252_01385 e58ac6dda755b81748265341a894053e 503 Gene3D G3DSA:3.30.230.10 9 166 5.1E-5 T 31-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DY252_01385 e58ac6dda755b81748265341a894053e 503 SUPERFAMILY SSF54211 8 168 6.07E-27 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_01385 e58ac6dda755b81748265341a894053e 503 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 394 1.9E-97 T 31-10-2018 IPR000523 Magnesium chelatase ChlI domain DY252_01385 e58ac6dda755b81748265341a894053e 503 SMART SM00382 209 391 2.8E-8 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_01385 e58ac6dda755b81748265341a894053e 503 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 316 329 4.0E-6 T 31-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 DY252_01385 e58ac6dda755b81748265341a894053e 503 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 340 352 4.0E-6 T 31-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 DY252_01385 e58ac6dda755b81748265341a894053e 503 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 208 223 4.0E-6 T 31-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 DY252_01385 e58ac6dda755b81748265341a894053e 503 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 288 302 4.0E-6 T 31-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 DY252_10200 8d85d50a1d88eb5f9f61d91578d4b58c 279 Gene3D G3DSA:1.10.3720.10 12 266 1.7E-48 T 31-10-2018 IPR035906 MetI-like superfamily DY252_10200 8d85d50a1d88eb5f9f61d91578d4b58c 279 SUPERFAMILY SSF161098 5 267 4.19E-53 T 31-10-2018 IPR035906 MetI-like superfamily DY252_10200 8d85d50a1d88eb5f9f61d91578d4b58c 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 260 1.7E-16 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_09860 255cd91191626850648c0dd1cb0a6de1 229 Gene3D G3DSA:3.40.50.360 1 217 2.2E-47 T 31-10-2018 IPR029039 Flavoprotein-like superfamily DY252_09860 255cd91191626850648c0dd1cb0a6de1 229 SUPERFAMILY SSF52218 1 219 1.1E-35 T 31-10-2018 IPR029039 Flavoprotein-like superfamily DY252_09860 255cd91191626850648c0dd1cb0a6de1 229 Pfam PF02525 Flavodoxin-like fold 3 208 7.4E-31 T 31-10-2018 IPR003680 Flavodoxin-like fold DY252_09860 255cd91191626850648c0dd1cb0a6de1 229 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 216 23.64 T 31-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 DY252_01130 9a97b3a7bee859a8f3b585b8b41b9805 301 SUPERFAMILY SSF69593 34 254 3.4E-25 T 31-10-2018 DY252_01130 9a97b3a7bee859a8f3b585b8b41b9805 301 Pfam PF01553 Acyltransferase 64 180 9.9E-22 T 31-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DY252_01130 9a97b3a7bee859a8f3b585b8b41b9805 301 SMART SM00563 67 183 2.1E-23 T 31-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DY252_17715 b2d037b9baadd062af7babf019f4a538 216 SMART SM00382 32 210 2.3E-8 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_17715 b2d037b9baadd062af7babf019f4a538 216 Gene3D G3DSA:3.40.50.300 8 216 7.2E-52 T 31-10-2018 DY252_17715 b2d037b9baadd062af7babf019f4a538 216 SUPERFAMILY SSF52540 9 215 6.01E-51 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_17715 b2d037b9baadd062af7babf019f4a538 216 Pfam PF00005 ABC transporter 25 168 3.9E-27 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_01125 e1306fed1533694ccaa785b769d72214 463 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 445 1.0E-144 T 31-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 DY252_01125 e1306fed1533694ccaa785b769d72214 463 Gene3D G3DSA:3.40.50.12160 5 146 1.5E-32 T 31-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily DY252_01125 e1306fed1533694ccaa785b769d72214 463 Pfam PF00919 Uncharacterized protein family UPF0004 6 110 1.2E-30 T 31-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 DY252_01125 e1306fed1533694ccaa785b769d72214 463 SMART SM00729 156 374 1.5E-57 T 31-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DY252_01125 e1306fed1533694ccaa785b769d72214 463 Pfam PF04055 Radical SAM superfamily 162 332 2.5E-28 T 31-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DY252_01125 e1306fed1533694ccaa785b769d72214 463 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 160 180 - T 31-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 DY252_01125 e1306fed1533694ccaa785b769d72214 463 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 6 449 6.6E-150 T 31-10-2018 DY252_01125 e1306fed1533694ccaa785b769d72214 463 Gene3D G3DSA:3.80.30.20 154 388 4.0E-80 T 31-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DY252_01125 e1306fed1533694ccaa785b769d72214 463 Pfam PF01938 TRAM domain 390 449 7.7E-11 T 31-10-2018 IPR002792 TRAM domain DY252_01125 e1306fed1533694ccaa785b769d72214 463 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 5 449 70.318 T 31-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 DY252_01125 e1306fed1533694ccaa785b769d72214 463 SUPERFAMILY SSF102114 133 383 5.1E-59 T 31-10-2018 DY252_06255 52595fca5b52adf248b133b56be3dd50 376 SUPERFAMILY SSF52540 10 227 1.86E-61 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_06255 52595fca5b52adf248b133b56be3dd50 376 Pfam PF00005 ABC transporter 19 161 2.7E-32 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_06255 52595fca5b52adf248b133b56be3dd50 376 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_06255 52595fca5b52adf248b133b56be3dd50 376 Pfam PF03459 TOBE domain 325 369 4.7E-6 T 31-10-2018 IPR005116 Transport-associated OB, type 1 DY252_06255 52595fca5b52adf248b133b56be3dd50 376 SUPERFAMILY SSF50331 240 369 4.25E-14 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_06255 52595fca5b52adf248b133b56be3dd50 376 SMART SM00382 24 211 5.1E-15 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_06255 52595fca5b52adf248b133b56be3dd50 376 Gene3D G3DSA:3.40.50.300 2 229 8.1E-59 T 31-10-2018 DY252_06255 52595fca5b52adf248b133b56be3dd50 376 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 4 369 1.5E-117 T 31-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 DY252_06255 52595fca5b52adf248b133b56be3dd50 376 Gene3D G3DSA:2.40.50.100 294 370 2.7E-10 T 31-10-2018 DY252_16510 8a2215583e687abd3e27b62d51d8e057 438 Pfam PF07804 HipA-like C-terminal domain 150 400 1.7E-45 T 31-10-2018 IPR012893 HipA-like, C-terminal DY252_16510 8a2215583e687abd3e27b62d51d8e057 438 Pfam PF13657 HipA N-terminal domain 12 104 4.0E-21 T 31-10-2018 IPR017508 HipA, N-terminal subdomain 1 DY252_16510 8a2215583e687abd3e27b62d51d8e057 438 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 7 105 3.6E-26 T 31-10-2018 IPR017508 HipA, N-terminal subdomain 1 DY252_20475 339b65db9a7d4aae19fbf9e8930e7b36 320 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 4 312 4.5E-52 T 31-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DY252_20475 339b65db9a7d4aae19fbf9e8930e7b36 320 Gene3D G3DSA:3.40.190.10 33 312 1.1E-58 T 31-10-2018 DY252_20475 339b65db9a7d4aae19fbf9e8930e7b36 320 SUPERFAMILY SSF53850 28 313 4.49E-49 T 31-10-2018 DY252_20475 339b65db9a7d4aae19fbf9e8930e7b36 320 Pfam PF16868 NMT1-like family 34 312 6.2E-50 T 31-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DY252_20475 339b65db9a7d4aae19fbf9e8930e7b36 320 Gene3D G3DSA:3.40.190.10 120 250 1.1E-58 T 31-10-2018 DY252_14235 dc595254cefddf217366376da98001a2 319 SUPERFAMILY SSF46689 262 313 3.59E-14 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_14235 dc595254cefddf217366376da98001a2 319 Gene3D G3DSA:1.10.10.60 206 315 5.9E-28 T 31-10-2018 DY252_14235 dc595254cefddf217366376da98001a2 319 Pfam PF12833 Helix-turn-helix domain 232 310 7.6E-22 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_14235 dc595254cefddf217366376da98001a2 319 SUPERFAMILY SSF46689 209 260 3.03E-7 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_14235 dc595254cefddf217366376da98001a2 319 SMART SM00342 226 309 4.9E-29 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_14235 dc595254cefddf217366376da98001a2 319 Pfam PF12852 Cupin 8 189 6.5E-31 T 31-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain DY252_19280 e7a96a457bd52272db9accaee7edb022 163 Pfam PF01047 MarR family 57 113 7.2E-13 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_19280 e7a96a457bd52272db9accaee7edb022 163 SMART SM00347 49 149 1.2E-21 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_19280 e7a96a457bd52272db9accaee7edb022 163 Gene3D G3DSA:1.10.10.10 7 161 5.1E-33 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_19280 e7a96a457bd52272db9accaee7edb022 163 SUPERFAMILY SSF46785 28 160 2.11E-31 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_19280 e7a96a457bd52272db9accaee7edb022 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 89 1.8E-12 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_19280 e7a96a457bd52272db9accaee7edb022 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 109 125 1.8E-12 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_19280 e7a96a457bd52272db9accaee7edb022 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 139 159 1.8E-12 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_19280 e7a96a457bd52272db9accaee7edb022 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 105 1.8E-12 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_01760 3268dca53e26277a2a1bdb285f39e199 189 Gene3D G3DSA:3.30.1370.70 1 97 3.7E-34 T 31-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily DY252_01760 3268dca53e26277a2a1bdb285f39e199 189 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 3 90 3.9E-32 T 31-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal DY252_01760 3268dca53e26277a2a1bdb285f39e199 189 Gene3D G3DSA:3.30.300.130 112 186 4.6E-32 T 31-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DY252_01760 3268dca53e26277a2a1bdb285f39e199 189 Pfam PF01106 NifU-like domain 118 184 8.7E-29 T 31-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 DY252_01760 3268dca53e26277a2a1bdb285f39e199 189 SMART SM00932 3 90 2.3E-47 T 31-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal DY252_01760 3268dca53e26277a2a1bdb285f39e199 189 PIRSF PIRSF036773 1 189 3.8E-77 T 31-10-2018 IPR035433 NFU1-like DY252_01760 3268dca53e26277a2a1bdb285f39e199 189 SUPERFAMILY SSF117916 109 187 8.28E-28 T 31-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DY252_01760 3268dca53e26277a2a1bdb285f39e199 189 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 122 186 8.0E-25 T 31-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 DY252_01760 3268dca53e26277a2a1bdb285f39e199 189 SUPERFAMILY SSF110836 1 92 9.55E-33 T 31-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily DY252_20270 0d9591fd4a09ea68272b74c07058ccf1 103 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 14 78 2.0E-9 T 31-10-2018 DY252_20270 0d9591fd4a09ea68272b74c07058ccf1 103 Pfam PF14145 YrhK-like protein 22 75 9.7E-18 T 31-10-2018 IPR025424 YrhK domain DY252_13135 ca3ef4e4c3c7e41b6f2e1a6eba3db0f0 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 287 1.6E-105 T 31-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DY252_13135 ca3ef4e4c3c7e41b6f2e1a6eba3db0f0 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 31-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 DY252_13135 ca3ef4e4c3c7e41b6f2e1a6eba3db0f0 293 PIRSF PIRSF001365 1 293 3.1E-93 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_13135 ca3ef4e4c3c7e41b6f2e1a6eba3db0f0 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 66.411 T 31-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DY252_13135 ca3ef4e4c3c7e41b6f2e1a6eba3db0f0 293 SMART SM01130 1 289 2.6E-151 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_13135 ca3ef4e4c3c7e41b6f2e1a6eba3db0f0 293 Gene3D G3DSA:3.20.20.70 1 292 1.4E-115 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_13135 ca3ef4e4c3c7e41b6f2e1a6eba3db0f0 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 7.3E-33 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_13135 ca3ef4e4c3c7e41b6f2e1a6eba3db0f0 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 7.3E-33 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_13135 ca3ef4e4c3c7e41b6f2e1a6eba3db0f0 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 7.3E-33 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_13135 ca3ef4e4c3c7e41b6f2e1a6eba3db0f0 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 7.3E-33 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_13135 ca3ef4e4c3c7e41b6f2e1a6eba3db0f0 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 31-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DY252_13135 ca3ef4e4c3c7e41b6f2e1a6eba3db0f0 293 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 7.3E-98 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_13135 ca3ef4e4c3c7e41b6f2e1a6eba3db0f0 293 SUPERFAMILY SSF51569 2 289 4.71E-108 T 31-10-2018 DY252_14555 6334e639aa2bf9e6f106b78b1ab58d30 134 Pfam PF02566 OsmC-like protein 32 128 2.4E-18 T 31-10-2018 IPR003718 OsmC/Ohr family DY252_14555 6334e639aa2bf9e6f106b78b1ab58d30 134 SUPERFAMILY SSF82784 1 133 8.9E-41 T 31-10-2018 IPR036102 OsmC/Ohr superfamily DY252_14555 6334e639aa2bf9e6f106b78b1ab58d30 134 Gene3D G3DSA:2.20.25.10 1 32 1.1E-10 T 31-10-2018 DY252_14555 6334e639aa2bf9e6f106b78b1ab58d30 134 Gene3D G3DSA:3.30.300.20 36 134 8.9E-32 T 31-10-2018 IPR015946 K homology domain-like, alpha/beta DY252_15315 6e55d4d42fd05b023ac3f6eddefc1204 256 Pfam PF00005 ABC transporter 25 166 1.8E-27 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_15315 6e55d4d42fd05b023ac3f6eddefc1204 256 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_15315 6e55d4d42fd05b023ac3f6eddefc1204 256 Gene3D G3DSA:3.40.50.300 6 249 2.6E-55 T 31-10-2018 DY252_15315 6e55d4d42fd05b023ac3f6eddefc1204 256 SMART SM00382 34 229 2.1E-15 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_15315 6e55d4d42fd05b023ac3f6eddefc1204 256 SUPERFAMILY SSF52540 6 233 1.96E-62 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12520 7e28e71ddafbfab1119f5b9e92b7a993 401 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 95 232 3.5E-20 T 31-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DY252_12520 7e28e71ddafbfab1119f5b9e92b7a993 401 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 239 339 1.1E-25 T 31-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DY252_12520 7e28e71ddafbfab1119f5b9e92b7a993 401 SUPERFAMILY SSF53901 9 231 1.34E-35 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_12520 7e28e71ddafbfab1119f5b9e92b7a993 401 Gene3D G3DSA:3.40.47.10 5 235 4.6E-30 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_12520 7e28e71ddafbfab1119f5b9e92b7a993 401 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 151 167 - T 31-10-2018 IPR018201 Beta-ketoacyl synthase, active site DY252_12520 7e28e71ddafbfab1119f5b9e92b7a993 401 Gene3D G3DSA:3.40.47.10 242 393 1.2E-39 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_12520 7e28e71ddafbfab1119f5b9e92b7a993 401 SMART SM00825 Beta-ketoacyl synthase 11 398 2.3E-8 T 31-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DY252_12520 7e28e71ddafbfab1119f5b9e92b7a993 401 SUPERFAMILY SSF53901 208 396 1.36E-43 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_07075 eac518371941c7537b55511a1c7c161e 225 SMART SM00421 158 215 1.7E-25 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_07075 eac518371941c7537b55511a1c7c161e 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 160 215 1.0E-21 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_07075 eac518371941c7537b55511a1c7c161e 225 SMART SM00448 1 116 3.7E-24 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_07075 eac518371941c7537b55511a1c7c161e 225 Pfam PF00072 Response regulator receiver domain 3 116 2.7E-22 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_07075 eac518371941c7537b55511a1c7c161e 225 SUPERFAMILY SSF52172 1 132 3.13E-27 T 31-10-2018 IPR011006 CheY-like superfamily DY252_07075 eac518371941c7537b55511a1c7c161e 225 Gene3D G3DSA:1.10.10.10 154 222 2.2E-24 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_07075 eac518371941c7537b55511a1c7c161e 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 203 2.7E-13 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_07075 eac518371941c7537b55511a1c7c161e 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 175 2.7E-13 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_07075 eac518371941c7537b55511a1c7c161e 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 191 2.7E-13 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_07075 eac518371941c7537b55511a1c7c161e 225 ProSitePatterns PS00622 LuxR-type HTH domain signature. 175 202 - T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_07075 eac518371941c7537b55511a1c7c161e 225 SUPERFAMILY SSF46894 158 217 4.76E-21 T 31-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DY252_07075 eac518371941c7537b55511a1c7c161e 225 Gene3D G3DSA:3.40.50.2300 1 130 4.5E-29 T 31-10-2018 DY252_20925 58e2a59335738278ebb74c675a0be35a 342 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 105 310 9.7E-66 T 31-10-2018 IPR014142 P-type conjugative transfer protein TrbG DY252_20925 58e2a59335738278ebb74c675a0be35a 342 Gene3D G3DSA:2.60.40.2500 217 338 2.9E-11 T 31-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily DY252_20925 58e2a59335738278ebb74c675a0be35a 342 Pfam PF03524 Conjugal transfer protein 104 322 1.3E-57 T 31-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX DY252_06695 9bd26e7b8129d5b114e369238b5a1c0e 619 Pfam PF00733 Asparagine synthase 243 548 1.9E-51 T 31-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 DY252_06695 9bd26e7b8129d5b114e369238b5a1c0e 619 Pfam PF13522 Glutamine amidotransferase domain 28 166 8.5E-29 T 31-10-2018 DY252_06695 9bd26e7b8129d5b114e369238b5a1c0e 619 SUPERFAMILY SSF56235 1 220 2.23E-45 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_06695 9bd26e7b8129d5b114e369238b5a1c0e 619 SUPERFAMILY SSF52402 240 557 2.87E-48 T 31-10-2018 DY252_06695 9bd26e7b8129d5b114e369238b5a1c0e 619 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 539 4.2E-87 T 31-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DY252_06695 9bd26e7b8129d5b114e369238b5a1c0e 619 Gene3D G3DSA:3.60.20.10 3 190 2.3E-44 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_06695 9bd26e7b8129d5b114e369238b5a1c0e 619 PIRSF PIRSF001589 1 618 6.3E-107 T 31-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DY252_12355 c96a42c09774b96a5b62586e2baa7910 379 Gene3D G3DSA:3.40.630.10 1 293 2.3E-82 T 31-10-2018 DY252_12355 c96a42c09774b96a5b62586e2baa7910 379 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 29 107 1.1E-12 T 31-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 DY252_12355 c96a42c09774b96a5b62586e2baa7910 379 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 162 363 2.4E-13 T 31-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 DY252_12355 c96a42c09774b96a5b62586e2baa7910 379 SUPERFAMILY SSF53187 15 367 1.82E-31 T 31-10-2018 DY252_16700 57e2b797303e52032d51d6068d95a710 530 Gene3D G3DSA:3.40.50.620 21 283 3.3E-71 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_16700 57e2b797303e52032d51d6068d95a710 530 Pfam PF01921 tRNA synthetases class I (K) 14 368 1.1E-131 T 31-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 DY252_16700 57e2b797303e52032d51d6068d95a710 530 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 15 514 2.6E-53 T 31-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 DY252_16700 57e2b797303e52032d51d6068d95a710 530 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 13 523 29.482 T 31-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 DY252_16700 57e2b797303e52032d51d6068d95a710 530 Gene3D G3DSA:1.10.10.350 431 522 1.4E-18 T 31-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DY252_16700 57e2b797303e52032d51d6068d95a710 530 Gene3D G3DSA:2.30.30.300 184 230 3.3E-71 T 31-10-2018 IPR023386 Lysine-tRNA ligase, insertion domain superfamily GO:0004824 KEGG: 00970+6.1.1.6 DY252_16700 57e2b797303e52032d51d6068d95a710 530 SUPERFAMILY SSF52374 15 332 2.51E-57 T 31-10-2018 DY252_16700 57e2b797303e52032d51d6068d95a710 530 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 54 - T 31-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_16700 57e2b797303e52032d51d6068d95a710 530 SUPERFAMILY SSF48163 331 523 2.09E-44 T 31-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DY252_09595 72af1766daba9e8080d905d1310cce4e 438 PIRSF PIRSF006066 5 436 1.5E-100 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_09595 72af1766daba9e8080d905d1310cce4e 438 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 431 5.4E-107 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_09595 72af1766daba9e8080d905d1310cce4e 438 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 16 426 8.8E-89 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_02055 5c6fb877c31c432adedfb94421e801fc 578 SUPERFAMILY SSF158472 232 275 9.81E-6 T 31-10-2018 DY252_02055 5c6fb877c31c432adedfb94421e801fc 578 Gene3D G3DSA:3.30.70.1230 298 504 7.3E-47 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_02055 5c6fb877c31c432adedfb94421e801fc 578 SMART SM00304 227 279 6.0E-8 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_02055 5c6fb877c31c432adedfb94421e801fc 578 SMART SM00044 259 482 3.6E-5 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_02055 5c6fb877c31c432adedfb94421e801fc 578 SUPERFAMILY SSF55073 305 493 2.04E-42 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_02055 5c6fb877c31c432adedfb94421e801fc 578 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 307 486 4.6E-21 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_02055 5c6fb877c31c432adedfb94421e801fc 578 Pfam PF00672 HAMP domain 233 275 1.1E-6 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_02055 5c6fb877c31c432adedfb94421e801fc 578 Gene3D G3DSA:1.20.1480.50 186 284 1.6E-6 T 31-10-2018 DY252_19595 0cda98a64a52b120e5586f077ffd320a 903 SUPERFAMILY SSF52317 351 519 1.4E-7 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_19595 0cda98a64a52b120e5586f077ffd320a 903 Gene3D G3DSA:3.40.50.880 368 521 2.3E-5 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_19595 0cda98a64a52b120e5586f077ffd320a 903 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 7 85 4.4E-16 T 31-10-2018 IPR011933 Double transmembrane domain DY252_19595 0cda98a64a52b120e5586f077ffd320a 903 Pfam PF13709 Domain of unknown function (DUF4159) 687 883 3.6E-43 T 31-10-2018 IPR025297 Domain of unknown function DUF4159 DY252_19595 0cda98a64a52b120e5586f077ffd320a 903 Pfam PF07584 Aerotolerance regulator N-terminal 6 80 2.3E-13 T 31-10-2018 IPR024163 Aerotolerance regulator, N-terminal DY252_19595 0cda98a64a52b120e5586f077ffd320a 903 Gene3D G3DSA:3.40.50.12140 683 885 9.4E-56 T 31-10-2018 DY252_07680 a1449079c9a89f802ced307130270342 185 Gene3D G3DSA:1.10.530.10 15 152 9.6E-36 T 31-10-2018 DY252_07680 a1449079c9a89f802ced307130270342 185 SUPERFAMILY SSF53955 12 151 9.07E-38 T 31-10-2018 IPR023346 Lysozyme-like domain superfamily DY252_07680 a1449079c9a89f802ced307130270342 185 Pfam PF01464 Transglycosylase SLT domain 32 128 1.5E-23 T 31-10-2018 IPR008258 Transglycosylase SLT domain 1 DY252_08965 d3fb74ba6b14ae2a6316882e08065e47 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 5.9E-38 T 31-10-2018 IPR027486 Ribosomal protein S10 domain DY252_08965 d3fb74ba6b14ae2a6316882e08065e47 102 SUPERFAMILY SSF54999 6 102 1.03E-39 T 31-10-2018 IPR036838 Ribosomal protein S10 domain superfamily DY252_08965 d3fb74ba6b14ae2a6316882e08065e47 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 5.1E-48 T 31-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_08965 d3fb74ba6b14ae2a6316882e08065e47 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.4E-19 T 31-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_08965 d3fb74ba6b14ae2a6316882e08065e47 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.4E-19 T 31-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_08965 d3fb74ba6b14ae2a6316882e08065e47 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.4E-19 T 31-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_08965 d3fb74ba6b14ae2a6316882e08065e47 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 31-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_08965 d3fb74ba6b14ae2a6316882e08065e47 102 Gene3D G3DSA:3.30.70.600 1 102 3.3E-39 T 31-10-2018 IPR036838 Ribosomal protein S10 domain superfamily DY252_08965 d3fb74ba6b14ae2a6316882e08065e47 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 28.006 T 31-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_08965 d3fb74ba6b14ae2a6316882e08065e47 102 SMART SM01403 7 101 1.0E-59 T 31-10-2018 IPR027486 Ribosomal protein S10 domain DY252_08595 f42d239ba2fa4162e47c241fd8e95851 303 Pfam PF00294 pfkB family carbohydrate kinase 5 298 8.6E-63 T 31-10-2018 IPR011611 Carbohydrate kinase PfkB DY252_08595 f42d239ba2fa4162e47c241fd8e95851 303 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 251 264 - T 31-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DY252_08595 f42d239ba2fa4162e47c241fd8e95851 303 Gene3D G3DSA:3.40.1190.20 1 302 1.6E-74 T 31-10-2018 IPR029056 Ribokinase-like DY252_08595 f42d239ba2fa4162e47c241fd8e95851 303 SUPERFAMILY SSF53613 2 298 3.12E-73 T 31-10-2018 IPR029056 Ribokinase-like DY252_15605 e5b038ce359934d2872675204d0b3838 158 SUPERFAMILY SSF50199 47 156 1.31E-18 T 31-10-2018 DY252_15605 e5b038ce359934d2872675204d0b3838 158 SMART SM00318 39 157 1.3E-4 T 31-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 DY252_15605 e5b038ce359934d2872675204d0b3838 158 Pfam PF00565 Staphylococcal nuclease homologue 70 147 1.5E-8 T 31-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 DY252_15605 e5b038ce359934d2872675204d0b3838 158 Gene3D G3DSA:2.40.50.90 41 143 3.8E-18 T 31-10-2018 IPR035437 SNase-like, OB-fold superfamily DY252_03355 7109929cf6b8483640bb7c8decfd474f 808 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 259 2.5E-8 T 31-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DY252_03355 7109929cf6b8483640bb7c8decfd474f 808 SUPERFAMILY SSF52922 655 806 4.85E-19 T 31-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DY252_03355 7109929cf6b8483640bb7c8decfd474f 808 Gene3D G3DSA:3.40.50.920 658 806 3.1E-12 T 31-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DY252_03355 7109929cf6b8483640bb7c8decfd474f 808 SUPERFAMILY SSF52518 435 649 4.27E-57 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_03355 7109929cf6b8483640bb7c8decfd474f 808 Gene3D G3DSA:3.40.50.970 431 656 2.2E-68 T 31-10-2018 DY252_03355 7109929cf6b8483640bb7c8decfd474f 808 Gene3D G3DSA:3.40.50.970 25 430 1.1E-79 T 31-10-2018 DY252_03355 7109929cf6b8483640bb7c8decfd474f 808 PIRSF PIRSF000156 3 806 2.3E-61 T 31-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 DY252_03355 7109929cf6b8483640bb7c8decfd474f 808 SMART SM00861 442 648 2.0E-13 T 31-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DY252_03355 7109929cf6b8483640bb7c8decfd474f 808 SUPERFAMILY SSF52518 37 384 4.12E-72 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_05875 5a631566eb82c0ecdd2bc66baec61a62 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 2.8E-10 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05875 5a631566eb82c0ecdd2bc66baec61a62 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 2.8E-10 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05875 5a631566eb82c0ecdd2bc66baec61a62 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 2.8E-10 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05875 5a631566eb82c0ecdd2bc66baec61a62 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 240 2.6E-53 T 31-10-2018 DY252_05875 5a631566eb82c0ecdd2bc66baec61a62 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.5E-35 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05875 5a631566eb82c0ecdd2bc66baec61a62 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.5E-35 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05875 5a631566eb82c0ecdd2bc66baec61a62 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.5E-35 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05875 5a631566eb82c0ecdd2bc66baec61a62 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.5E-35 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05875 5a631566eb82c0ecdd2bc66baec61a62 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.5E-35 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05875 5a631566eb82c0ecdd2bc66baec61a62 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.5E-35 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05875 5a631566eb82c0ecdd2bc66baec61a62 243 SUPERFAMILY SSF51735 7 242 1.2E-70 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_05875 5a631566eb82c0ecdd2bc66baec61a62 243 Gene3D G3DSA:3.40.50.720 1 242 3.9E-70 T 31-10-2018 DY252_17955 4a0dff75c2d95a863e7c802e2f74e6c9 96 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 2 75 1.4E-12 T 31-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 DY252_17955 4a0dff75c2d95a863e7c802e2f74e6c9 96 SUPERFAMILY SSF51316 3 94 3.66E-14 T 31-10-2018 IPR011057 Mss4-like superfamily DY252_12955 5a2b57b1b1ee465bdb251896bf9da498 428 Gene3D G3DSA:3.90.1150.10 294 428 1.7E-48 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_12955 5a2b57b1b1ee465bdb251896bf9da498 428 PIRSF PIRSF001434 1 428 7.2E-119 T 31-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DY252_12955 5a2b57b1b1ee465bdb251896bf9da498 428 Gene3D G3DSA:3.40.640.10 5 290 3.0E-90 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_12955 5a2b57b1b1ee465bdb251896bf9da498 428 SUPERFAMILY SSF53383 5 426 1.18E-112 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_12955 5a2b57b1b1ee465bdb251896bf9da498 428 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 6 425 5.3E-187 T 31-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 DY252_12955 5a2b57b1b1ee465bdb251896bf9da498 428 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 425 6.4E-129 T 31-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DY252_16775 60129eb4eab3406568479c790eeefd96 927 Pfam PF13307 Helicase C-terminal domain 750 890 9.0E-17 T 31-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DY252_16775 60129eb4eab3406568479c790eeefd96 927 Gene3D G3DSA:3.40.50.300 216 480 7.1E-30 T 31-10-2018 DY252_16775 60129eb4eab3406568479c790eeefd96 927 SUPERFAMILY SSF52540 201 886 7.66E-15 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_16775 60129eb4eab3406568479c790eeefd96 927 Gene3D G3DSA:3.40.50.300 728 910 6.2E-24 T 31-10-2018 DY252_16775 60129eb4eab3406568479c790eeefd96 927 SMART SM00491 763 890 3.3E-9 T 31-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DY252_06565 e674c3de456be017d2e8ae1d4a7d9386 665 SMART SM01358 39 286 2.3E-24 T 31-10-2018 IPR032255 Helical bimodular sensor domain DY252_06565 e674c3de456be017d2e8ae1d4a7d9386 665 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 467 631 2.1E-32 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_06565 e674c3de456be017d2e8ae1d4a7d9386 665 SMART SM00283 404 651 4.9E-45 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_06565 e674c3de456be017d2e8ae1d4a7d9386 665 Pfam PF00672 HAMP domain 315 361 2.8E-6 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_06565 e674c3de456be017d2e8ae1d4a7d9386 665 SUPERFAMILY SSF58104 344 657 9.42E-63 T 31-10-2018 DY252_06565 e674c3de456be017d2e8ae1d4a7d9386 665 SMART SM00304 315 368 3.0E-5 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_06565 e674c3de456be017d2e8ae1d4a7d9386 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 502 529 6.1E-22 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_06565 e674c3de456be017d2e8ae1d4a7d9386 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 424 453 6.1E-22 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_06565 e674c3de456be017d2e8ae1d4a7d9386 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 531 560 6.1E-22 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_06565 e674c3de456be017d2e8ae1d4a7d9386 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 579 608 6.1E-22 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_06565 e674c3de456be017d2e8ae1d4a7d9386 665 Gene3D G3DSA:1.20.1480.50 274 373 6.2E-11 T 31-10-2018 DY252_06565 e674c3de456be017d2e8ae1d4a7d9386 665 Gene3D G3DSA:1.10.287.950 374 665 7.3E-56 T 31-10-2018 DY252_06280 1653ad7bf49e05bebe5b5de5aff78a85 622 Gene3D G3DSA:2.60.120.10 6 144 1.4E-21 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_06280 1653ad7bf49e05bebe5b5de5aff78a85 622 Pfam PF00571 CBS domain 156 208 7.2E-8 T 31-10-2018 IPR000644 CBS domain DY252_06280 1653ad7bf49e05bebe5b5de5aff78a85 622 Pfam PF00571 CBS domain 221 272 7.9E-10 T 31-10-2018 IPR000644 CBS domain DY252_06280 1653ad7bf49e05bebe5b5de5aff78a85 622 Pfam PF03445 Putative nucleotidyltransferase DUF294 300 437 1.1E-47 T 31-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 DY252_06280 1653ad7bf49e05bebe5b5de5aff78a85 622 SUPERFAMILY SSF51206 3 135 3.8E-24 T 31-10-2018 IPR018490 Cyclic nucleotide-binding-like DY252_06280 1653ad7bf49e05bebe5b5de5aff78a85 622 Gene3D G3DSA:3.10.580.10 149 280 5.2E-33 T 31-10-2018 DY252_06280 1653ad7bf49e05bebe5b5de5aff78a85 622 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 474 617 3.1E-47 T 31-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding DY252_06280 1653ad7bf49e05bebe5b5de5aff78a85 622 SMART SM00100 17 134 6.4E-8 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_06280 1653ad7bf49e05bebe5b5de5aff78a85 622 SUPERFAMILY SSF54631 152 271 2.02E-29 T 31-10-2018 DY252_06280 1653ad7bf49e05bebe5b5de5aff78a85 622 Pfam PF00027 Cyclic nucleotide-binding domain 36 117 2.8E-12 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_06280 1653ad7bf49e05bebe5b5de5aff78a85 622 SMART SM00116 163 211 0.0021 T 31-10-2018 IPR000644 CBS domain DY252_06280 1653ad7bf49e05bebe5b5de5aff78a85 622 SMART SM00116 228 275 4.1E-6 T 31-10-2018 IPR000644 CBS domain DY252_13525 4bc08755c3c9793c4df750449da1af08 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 31-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DY252_13525 4bc08755c3c9793c4df750449da1af08 90 Gene3D G3DSA:4.10.520.10 1 90 6.2E-37 T 31-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DY252_13525 4bc08755c3c9793c4df750449da1af08 90 SUPERFAMILY SSF47729 1 90 2.8E-32 T 31-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DY252_13525 4bc08755c3c9793c4df750449da1af08 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.1E-34 T 31-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DY252_13525 4bc08755c3c9793c4df750449da1af08 90 SMART SM00411 1 90 4.5E-45 T 31-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DY252_13525 4bc08755c3c9793c4df750449da1af08 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.9E-17 T 31-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DY252_13525 4bc08755c3c9793c4df750449da1af08 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.9E-17 T 31-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DY252_13525 4bc08755c3c9793c4df750449da1af08 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.9E-17 T 31-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DY252_20185 5aa10d340f3ca049e227c39925826f26 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 3.8E-60 T 31-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_20185 5aa10d340f3ca049e227c39925826f26 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 3.8E-60 T 31-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_20185 5aa10d340f3ca049e227c39925826f26 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 3.8E-60 T 31-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_20185 5aa10d340f3ca049e227c39925826f26 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 3.8E-60 T 31-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_20185 5aa10d340f3ca049e227c39925826f26 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 3.8E-60 T 31-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_20185 5aa10d340f3ca049e227c39925826f26 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 3.8E-60 T 31-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_20185 5aa10d340f3ca049e227c39925826f26 660 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 3.8E-60 T 31-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_20185 5aa10d340f3ca049e227c39925826f26 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 3.6E-92 T 31-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_20185 5aa10d340f3ca049e227c39925826f26 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 3.6E-92 T 31-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_20185 5aa10d340f3ca049e227c39925826f26 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 3.6E-92 T 31-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_20185 5aa10d340f3ca049e227c39925826f26 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 3.6E-92 T 31-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_20185 5aa10d340f3ca049e227c39925826f26 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 3.6E-92 T 31-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_20185 5aa10d340f3ca049e227c39925826f26 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 3.6E-92 T 31-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_20185 5aa10d340f3ca049e227c39925826f26 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 3.6E-92 T 31-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_20185 5aa10d340f3ca049e227c39925826f26 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 3.6E-92 T 31-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_20185 5aa10d340f3ca049e227c39925826f26 660 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 639 1.0E-117 T 31-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal DY252_20185 5aa10d340f3ca049e227c39925826f26 660 Pfam PF01578 Cytochrome C assembly protein 89 295 2.4E-52 T 31-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DY252_20185 5aa10d340f3ca049e227c39925826f26 660 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 1.1E-203 T 31-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_09580 75ca9d01a322508db4737f4f8d94684f 235 Pfam PF03692 Putative zinc- or iron-chelating domain 80 167 1.4E-10 T 31-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein DY252_01345 25a868a4cea227a9bcc0fc43d35f1f94 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.0E-10 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_01345 25a868a4cea227a9bcc0fc43d35f1f94 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.0E-10 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_01345 25a868a4cea227a9bcc0fc43d35f1f94 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.0E-10 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_01345 25a868a4cea227a9bcc0fc43d35f1f94 246 Gene3D G3DSA:3.40.50.720 3 245 1.9E-81 T 31-10-2018 DY252_01345 25a868a4cea227a9bcc0fc43d35f1f94 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 1.4E-62 T 31-10-2018 DY252_01345 25a868a4cea227a9bcc0fc43d35f1f94 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 190 1.7E-4 T 31-10-2018 DY252_01345 25a868a4cea227a9bcc0fc43d35f1f94 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.2E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_01345 25a868a4cea227a9bcc0fc43d35f1f94 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 6.2E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_01345 25a868a4cea227a9bcc0fc43d35f1f94 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 6.2E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_01345 25a868a4cea227a9bcc0fc43d35f1f94 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 6.2E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_01345 25a868a4cea227a9bcc0fc43d35f1f94 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.2E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_01345 25a868a4cea227a9bcc0fc43d35f1f94 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 6.2E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_01345 25a868a4cea227a9bcc0fc43d35f1f94 246 SUPERFAMILY SSF51735 5 245 6.93E-82 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_08455 47b5f99c58e1d439ccb1227462547c1d 516 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 16 32 - T 31-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DY252_08455 47b5f99c58e1d439ccb1227462547c1d 516 Gene3D G3DSA:1.10.238.260 284 396 5.2E-38 T 31-10-2018 DY252_08455 47b5f99c58e1d439ccb1227462547c1d 516 Pfam PF08502 LeuA allosteric (dimerisation) domain 374 502 1.5E-32 T 31-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DY252_08455 47b5f99c58e1d439ccb1227462547c1d 516 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 203 216 - T 31-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DY252_08455 47b5f99c58e1d439ccb1227462547c1d 516 SUPERFAMILY SSF51569 5 295 5.57E-101 T 31-10-2018 DY252_08455 47b5f99c58e1d439ccb1227462547c1d 516 SMART SM00917 374 503 1.5E-37 T 31-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DY252_08455 47b5f99c58e1d439ccb1227462547c1d 516 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 8 500 8.0E-219 T 31-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DY252_08455 47b5f99c58e1d439ccb1227462547c1d 516 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 6 512 42.781 T 31-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DY252_08455 47b5f99c58e1d439ccb1227462547c1d 516 Gene3D G3DSA:3.30.160.270 397 503 1.5E-13 T 31-10-2018 DY252_08455 47b5f99c58e1d439ccb1227462547c1d 516 Pfam PF00682 HMGL-like 8 277 2.1E-100 T 31-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DY252_08455 47b5f99c58e1d439ccb1227462547c1d 516 SUPERFAMILY SSF110921 395 502 1.05E-24 T 31-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DY252_08455 47b5f99c58e1d439ccb1227462547c1d 516 Gene3D G3DSA:3.20.20.70 5 280 4.4E-109 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_16250 20e6caadb371238a7b1819b01a5209aa 296 Gene3D G3DSA:2.120.10.30 1 294 1.3E-92 T 31-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DY252_16250 20e6caadb371238a7b1819b01a5209aa 296 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 15 264 3.5E-78 T 31-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region DY252_16250 20e6caadb371238a7b1819b01a5209aa 296 SUPERFAMILY SSF63829 10 294 3.76E-56 T 31-10-2018 DY252_16250 20e6caadb371238a7b1819b01a5209aa 296 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 16 33 4.6E-34 T 31-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DY252_16250 20e6caadb371238a7b1819b01a5209aa 296 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 246 264 4.6E-34 T 31-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DY252_16250 20e6caadb371238a7b1819b01a5209aa 296 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 92 113 4.6E-34 T 31-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DY252_16250 20e6caadb371238a7b1819b01a5209aa 296 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 204 221 4.6E-34 T 31-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DY252_16250 20e6caadb371238a7b1819b01a5209aa 296 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 165 185 4.6E-34 T 31-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DY252_08135 d893354dbdb8f71a3a909c9844a88638 244 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 58 71 1.0E-5 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_08135 d893354dbdb8f71a3a909c9844a88638 244 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 79 102 1.0E-5 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_08135 d893354dbdb8f71a3a909c9844a88638 244 SUPERFAMILY SSF46689 45 116 1.39E-15 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_08135 d893354dbdb8f71a3a909c9844a88638 244 Pfam PF00440 Bacterial regulatory proteins, tetR family 58 104 2.7E-10 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_08135 d893354dbdb8f71a3a909c9844a88638 244 SUPERFAMILY SSF48498 128 239 2.45E-14 T 31-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DY252_08135 d893354dbdb8f71a3a909c9844a88638 244 Gene3D G3DSA:1.10.357.10 45 243 2.8E-35 T 31-10-2018 DY252_20695 a179e84a186d0c6d08ca94a6c83f6982 249 Pfam PF01012 Electron transfer flavoprotein domain 30 206 8.1E-44 T 31-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DY252_20695 a179e84a186d0c6d08ca94a6c83f6982 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 31-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 DY252_20695 a179e84a186d0c6d08ca94a6c83f6982 249 Gene3D G3DSA:3.40.50.620 1 247 1.8E-87 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_20695 a179e84a186d0c6d08ca94a6c83f6982 249 PIRSF PIRSF000090 1 249 3.0E-83 T 31-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 DY252_20695 a179e84a186d0c6d08ca94a6c83f6982 249 SUPERFAMILY SSF52402 1 244 1.26E-84 T 31-10-2018 DY252_20695 a179e84a186d0c6d08ca94a6c83f6982 249 SMART SM00893 23 211 2.1E-66 T 31-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DY252_07835 b91a64b4559a9fe6d6374b05918c423f 397 Hamap MF_01970 Kynureninase [kynU]. 1 380 32.817 T 31-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 DY252_07835 b91a64b4559a9fe6d6374b05918c423f 397 Pfam PF00266 Aminotransferase class-V 62 333 8.8E-23 T 31-10-2018 IPR000192 Aminotransferase class V domain DY252_07835 b91a64b4559a9fe6d6374b05918c423f 397 SUPERFAMILY SSF53383 2 381 5.74E-85 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_07835 b91a64b4559a9fe6d6374b05918c423f 397 Gene3D G3DSA:3.90.1150.10 5 380 3.1E-143 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_07835 b91a64b4559a9fe6d6374b05918c423f 397 TIGRFAM TIGR01814 kynureninase: kynureninase 7 381 1.2E-88 T 31-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 DY252_07835 b91a64b4559a9fe6d6374b05918c423f 397 Gene3D G3DSA:3.40.640.10 29 286 3.1E-143 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_07835 b91a64b4559a9fe6d6374b05918c423f 397 PIRSF PIRSF038800 2 388 1.3E-136 T 31-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 DY252_09585 b553dce9b08d0d8b8ce6f6138e1b157b 510 Gene3D G3DSA:3.40.50.12780 10 400 6.0E-129 T 31-10-2018 DY252_09585 b553dce9b08d0d8b8ce6f6138e1b157b 510 Pfam PF13193 AMP-binding enzyme C-terminal domain 416 491 1.6E-13 T 31-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DY252_09585 b553dce9b08d0d8b8ce6f6138e1b157b 510 Gene3D G3DSA:3.30.300.310 403 507 1.4E-29 T 31-10-2018 DY252_09585 b553dce9b08d0d8b8ce6f6138e1b157b 510 ProSitePatterns PS00455 Putative AMP-binding domain signature. 164 175 - T 31-10-2018 IPR020845 AMP-binding, conserved site DY252_09585 b553dce9b08d0d8b8ce6f6138e1b157b 510 Pfam PF00501 AMP-binding enzyme 20 407 2.7E-96 T 31-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DY252_09585 b553dce9b08d0d8b8ce6f6138e1b157b 510 SUPERFAMILY SSF56801 6 504 2.35E-142 T 31-10-2018 DY252_20090 680bbe6b5e386a6cf7f84a55331c7894 483 Pfam PF02321 Outer membrane efflux protein 285 463 9.9E-21 T 31-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DY252_20090 680bbe6b5e386a6cf7f84a55331c7894 483 Pfam PF02321 Outer membrane efflux protein 66 253 1.7E-24 T 31-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DY252_20090 680bbe6b5e386a6cf7f84a55331c7894 483 Gene3D G3DSA:2.20.200.10 102 354 7.1E-112 T 31-10-2018 DY252_20090 680bbe6b5e386a6cf7f84a55331c7894 483 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 463 1.1E-87 T 31-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DY252_20090 680bbe6b5e386a6cf7f84a55331c7894 483 Gene3D G3DSA:1.20.1600.10 55 463 7.1E-112 T 31-10-2018 DY252_20090 680bbe6b5e386a6cf7f84a55331c7894 483 SUPERFAMILY SSF56954 9 464 1.57E-89 T 31-10-2018 DY252_14730 e8d003fcc3a5b2cc2ab6a04b6694c28c 234 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 26 230 1.9E-48 T 31-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 DY252_14730 e8d003fcc3a5b2cc2ab6a04b6694c28c 234 SUPERFAMILY SSF48613 14 229 6.5E-69 T 31-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DY252_14730 e8d003fcc3a5b2cc2ab6a04b6694c28c 234 Pfam PF03070 TENA/THI-4/PQQC family 27 231 4.8E-48 T 31-10-2018 IPR004305 Thiaminase-2/PQQC DY252_14730 e8d003fcc3a5b2cc2ab6a04b6694c28c 234 Gene3D G3DSA:1.20.910.10 10 233 9.2E-65 T 31-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DY252_09760 88bc95504abb17aebe3086671b805c60 291 Gene3D G3DSA:1.10.10.10 2 84 1.3E-17 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_09760 88bc95504abb17aebe3086671b805c60 291 Pfam PF03466 LysR substrate binding domain 88 279 7.4E-26 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_09760 88bc95504abb17aebe3086671b805c60 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.3E-15 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_09760 88bc95504abb17aebe3086671b805c60 291 SUPERFAMILY SSF46785 1 111 9.4E-20 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_09760 88bc95504abb17aebe3086671b805c60 291 SUPERFAMILY SSF53850 89 283 6.88E-28 T 31-10-2018 DY252_09760 88bc95504abb17aebe3086671b805c60 291 Gene3D G3DSA:3.40.190.290 90 279 3.6E-24 T 31-10-2018 DY252_07800 11431837d0d70ad421fa759e40a1ce96 278 SUPERFAMILY SSF53474 4 256 3.24E-46 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_07800 11431837d0d70ad421fa759e40a1ce96 278 Gene3D G3DSA:3.40.50.1820 21 271 2.6E-57 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_07800 11431837d0d70ad421fa759e40a1ce96 278 Pfam PF12697 Alpha/beta hydrolase family 69 246 4.2E-8 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_03115 0e8f20263dbdd7cc2fb2da3139ae0021 260 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 30 131 1.1E-32 T 31-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_03115 0e8f20263dbdd7cc2fb2da3139ae0021 260 SUPERFAMILY SSF54292 28 128 1.04E-31 T 31-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DY252_03115 0e8f20263dbdd7cc2fb2da3139ae0021 260 Gene3D G3DSA:1.10.1060.10 129 260 7.2E-55 T 31-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DY252_03115 0e8f20263dbdd7cc2fb2da3139ae0021 260 SUPERFAMILY SSF46548 131 257 2.27E-37 T 31-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DY252_03115 0e8f20263dbdd7cc2fb2da3139ae0021 260 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 80 88 - T 31-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DY252_03115 0e8f20263dbdd7cc2fb2da3139ae0021 260 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 32 252 1.6E-80 T 31-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_03115 0e8f20263dbdd7cc2fb2da3139ae0021 260 Gene3D G3DSA:3.10.20.30 18 128 1.1E-45 T 31-10-2018 IPR012675 Beta-grasp domain superfamily DY252_03115 0e8f20263dbdd7cc2fb2da3139ae0021 260 Pfam PF13534 4Fe-4S dicluster domain 170 243 1.2E-8 T 31-10-2018 DY252_03115 0e8f20263dbdd7cc2fb2da3139ae0021 260 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 31-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DY252_12450 7cd59e3637f557bd6d3589b80e7507eb 114 Gene3D G3DSA:3.90.470.20 1 50 1.8E-6 T 31-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DY252_12450 7cd59e3637f557bd6d3589b80e7507eb 114 SUPERFAMILY SSF56214 29 78 1.06E-5 T 31-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DY252_02515 423e645abcf8d652588f72a3cac69996 356 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 342 1.3E-102 T 31-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DY252_02515 423e645abcf8d652588f72a3cac69996 356 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 343 46.435 T 31-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 DY252_02515 423e645abcf8d652588f72a3cac69996 356 Gene3D G3DSA:3.30.930.10 7 345 2.1E-116 T 31-10-2018 DY252_02515 423e645abcf8d652588f72a3cac69996 356 SUPERFAMILY SSF55681 99 344 1.42E-76 T 31-10-2018 DY252_02515 423e645abcf8d652588f72a3cac69996 356 Pfam PF01409 tRNA synthetases class II core domain (F) 92 342 2.6E-102 T 31-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 DY252_02515 423e645abcf8d652588f72a3cac69996 356 SUPERFAMILY SSF46589 12 98 5.23E-19 T 31-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DY252_02515 423e645abcf8d652588f72a3cac69996 356 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 3.8E-24 T 31-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DY252_14625 24de476ba163248217ce03d6337d1411 303 SUPERFAMILY SSF46689 203 250 3.85E-9 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_14625 24de476ba163248217ce03d6337d1411 303 SMART SM00342 216 299 1.5E-27 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_14625 24de476ba163248217ce03d6337d1411 303 Pfam PF12833 Helix-turn-helix domain 222 299 7.8E-20 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_14625 24de476ba163248217ce03d6337d1411 303 Gene3D G3DSA:1.10.10.60 250 302 1.4E-14 T 31-10-2018 DY252_14625 24de476ba163248217ce03d6337d1411 303 Gene3D G3DSA:1.10.10.60 199 249 7.9E-13 T 31-10-2018 DY252_14625 24de476ba163248217ce03d6337d1411 303 SUPERFAMILY SSF46689 252 300 1.93E-11 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_14625 24de476ba163248217ce03d6337d1411 303 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 253 295 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_10830 f1abe0d89986f03b3b405d794b6a7469 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 13 323 5.1E-31 T 31-10-2018 IPR016040 NAD(P)-binding domain DY252_10830 f1abe0d89986f03b3b405d794b6a7469 355 Gene3D G3DSA:3.40.50.720 1 189 5.5E-48 T 31-10-2018 DY252_10830 f1abe0d89986f03b3b405d794b6a7469 355 Gene3D G3DSA:3.90.25.10 190 351 6.5E-55 T 31-10-2018 DY252_10830 f1abe0d89986f03b3b405d794b6a7469 355 SUPERFAMILY SSF51735 5 338 4.58E-61 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_10830 f1abe0d89986f03b3b405d794b6a7469 355 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 6 348 4.2E-139 T 31-10-2018 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 DY252_14520 c30a072d61ddb16183ba7937527dd4c2 390 Gene3D G3DSA:3.40.640.10 44 281 8.6E-139 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_14520 c30a072d61ddb16183ba7937527dd4c2 390 Pfam PF00155 Aminotransferase class I and II 30 383 1.7E-58 T 31-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DY252_14520 c30a072d61ddb16183ba7937527dd4c2 390 Gene3D G3DSA:3.90.1150.10 16 380 8.6E-139 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_14520 c30a072d61ddb16183ba7937527dd4c2 390 SUPERFAMILY SSF53383 14 389 4.26E-101 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_06230 0fd3f9441a0fbb42bea3cb224255e121 100 TIGRFAM TIGR01374 soxD: sarcosine oxidase, delta subunit family 3 85 5.1E-37 T 31-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DY252_06230 0fd3f9441a0fbb42bea3cb224255e121 100 Pfam PF04267 Sarcosine oxidase, delta subunit family 3 84 2.4E-33 T 31-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DY252_06230 0fd3f9441a0fbb42bea3cb224255e121 100 Gene3D G3DSA:3.30.2270.10 1 99 8.8E-34 T 31-10-2018 IPR038561 Sarcosine oxidase subunit delta superfamily KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DY252_15170 7a5bc58461361b420f85e449af899d9d 491 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 104 403 1.2E-87 T 31-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 DY252_15170 7a5bc58461361b420f85e449af899d9d 491 Pfam PF13180 PDZ domain 133 210 9.7E-10 T 31-10-2018 IPR001478 PDZ domain GO:0005515 DY252_15170 7a5bc58461361b420f85e449af899d9d 491 SMART SM00245 202 393 2.6E-55 T 31-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DY252_15170 7a5bc58461361b420f85e449af899d9d 491 Gene3D G3DSA:2.30.42.10 130 216 2.2E-79 T 31-10-2018 DY252_15170 7a5bc58461361b420f85e449af899d9d 491 Gene3D G3DSA:3.90.226.10 217 390 2.2E-79 T 31-10-2018 DY252_15170 7a5bc58461361b420f85e449af899d9d 491 SUPERFAMILY SSF50156 121 214 5.8E-18 T 31-10-2018 IPR036034 PDZ superfamily GO:0005515 DY252_15170 7a5bc58461361b420f85e449af899d9d 491 SUPERFAMILY SSF52096 94 405 1.14E-61 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_15170 7a5bc58461361b420f85e449af899d9d 491 Gene3D G3DSA:3.30.750.44 106 368 2.2E-79 T 31-10-2018 DY252_15170 7a5bc58461361b420f85e449af899d9d 491 Pfam PF03572 Peptidase family S41 227 392 3.8E-44 T 31-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DY252_15170 7a5bc58461361b420f85e449af899d9d 491 SMART SM00228 130 202 3.2E-13 T 31-10-2018 IPR001478 PDZ domain GO:0005515 DY252_21210 e5cca303eb7772ed72e0fe2f0c3311d0 131 Pfam PF11171 Protein of unknown function (DUF2958) 3 105 4.1E-39 T 31-10-2018 IPR021341 Protein of unknown function DUF2958 DY252_01705 d64d3bd23c7632de8c68e48f187120aa 62 Gene3D G3DSA:3.30.920.30 1 59 1.8E-19 T 31-10-2018 IPR038570 HicA superfamily DY252_01705 d64d3bd23c7632de8c68e48f187120aa 62 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 58 1.6E-10 T 31-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 DY252_01705 d64d3bd23c7632de8c68e48f187120aa 62 SUPERFAMILY SSF54786 1 60 2.71E-13 T 31-10-2018 DY252_20705 9e2dbea0ff17f8407545f0911e3de68c 285 PIRSF PIRSF036480 3 284 6.4E-103 T 31-10-2018 DY252_20705 9e2dbea0ff17f8407545f0911e3de68c 285 Gene3D G3DSA:3.40.50.170 88 285 1.5E-69 T 31-10-2018 DY252_20705 9e2dbea0ff17f8407545f0911e3de68c 285 SUPERFAMILY SSF53328 89 284 3.27E-59 T 31-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DY252_20705 9e2dbea0ff17f8407545f0911e3de68c 285 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 3 283 43.916 T 31-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DY252_20705 9e2dbea0ff17f8407545f0911e3de68c 285 Gene3D G3DSA:3.30.70.260 1 87 4.2E-22 T 31-10-2018 DY252_20705 9e2dbea0ff17f8407545f0911e3de68c 285 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 7 283 6.1E-103 T 31-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DY252_20705 9e2dbea0ff17f8407545f0911e3de68c 285 Pfam PF01842 ACT domain 6 43 1.3E-6 T 31-10-2018 IPR002912 ACT domain DY252_20705 9e2dbea0ff17f8407545f0911e3de68c 285 SUPERFAMILY SSF55021 6 83 1.67E-15 T 31-10-2018 DY252_20705 9e2dbea0ff17f8407545f0911e3de68c 285 Pfam PF00551 Formyl transferase 89 265 1.7E-36 T 31-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DY252_20705 9e2dbea0ff17f8407545f0911e3de68c 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 257 282 1.1E-48 T 31-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DY252_20705 9e2dbea0ff17f8407545f0911e3de68c 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 89 111 1.1E-48 T 31-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DY252_20705 9e2dbea0ff17f8407545f0911e3de68c 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 235 257 1.1E-48 T 31-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DY252_20705 9e2dbea0ff17f8407545f0911e3de68c 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 8 34 1.1E-48 T 31-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DY252_20705 9e2dbea0ff17f8407545f0911e3de68c 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 111 138 1.1E-48 T 31-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DY252_20705 9e2dbea0ff17f8407545f0911e3de68c 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 40 52 1.1E-48 T 31-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DY252_18035 1ec9696a2a029479f4884be618f55058 477 Gene3D G3DSA:3.30.2290.10 16 229 1.5E-10 T 31-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal DY252_18035 1ec9696a2a029479f4884be618f55058 477 PIRSF PIRSF004919 17 476 2.8E-137 T 31-10-2018 IPR025502 TldD DY252_18035 1ec9696a2a029479f4884be618f55058 477 SUPERFAMILY SSF111283 20 473 1.31E-129 T 31-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 DY252_18035 1ec9696a2a029479f4884be618f55058 477 Pfam PF01523 Putative modulator of DNA gyrase 37 327 9.0E-68 T 31-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 DY252_19625 d14cd7f3caa31747e4053ef5ef02d6f3 74 Gene3D G3DSA:1.20.20.10 3 74 4.1E-26 T 31-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_19625 d14cd7f3caa31747e4053ef5ef02d6f3 74 Pfam PF00137 ATP synthase subunit C 9 70 7.3E-13 T 31-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 DY252_19625 d14cd7f3caa31747e4053ef5ef02d6f3 74 ProSitePatterns PS00605 ATP synthase c subunit signature. 37 58 - T 31-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_19625 d14cd7f3caa31747e4053ef5ef02d6f3 74 Hamap MF_01396 ATP synthase subunit c [atpH]. 4 72 14.593 T 31-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_19625 d14cd7f3caa31747e4053ef5ef02d6f3 74 PRINTS PR00124 ATP synthase C subunit signature 30 45 3.0E-25 T 31-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_19625 d14cd7f3caa31747e4053ef5ef02d6f3 74 PRINTS PR00124 ATP synthase C subunit signature 47 72 3.0E-25 T 31-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_19625 d14cd7f3caa31747e4053ef5ef02d6f3 74 PRINTS PR00124 ATP synthase C subunit signature 9 28 3.0E-25 T 31-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_19625 d14cd7f3caa31747e4053ef5ef02d6f3 74 SUPERFAMILY SSF81333 5 73 4.05E-16 T 31-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily DY252_13795 f1695c8f4a81280bfd672ec186d67ee8 384 Gene3D G3DSA:3.40.190.10 62 331 6.9E-44 T 31-10-2018 DY252_13795 f1695c8f4a81280bfd672ec186d67ee8 384 Gene3D G3DSA:3.40.190.10 168 291 6.9E-44 T 31-10-2018 DY252_13795 f1695c8f4a81280bfd672ec186d67ee8 384 Pfam PF13416 Bacterial extracellular solute-binding protein 76 333 6.0E-24 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_13795 f1695c8f4a81280bfd672ec186d67ee8 384 SUPERFAMILY SSF53850 55 381 2.4E-49 T 31-10-2018 DY252_13795 f1695c8f4a81280bfd672ec186d67ee8 384 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 51 2.2E-4 T 31-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DY252_08270 f49284d9bb980790f3bbfd34bebd56f6 259 Pfam PF02104 SURF1 family 33 239 1.4E-39 T 31-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_20085 cf76f85b060ecb99f781cc1a421b237e 203 Gene3D G3DSA:2.60.120.590 16 203 9.1E-64 T 31-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily DY252_20085 cf76f85b060ecb99f781cc1a421b237e 203 SUPERFAMILY SSF51197 6 198 1.65E-62 T 31-10-2018 DY252_20085 cf76f85b060ecb99f781cc1a421b237e 203 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 21 196 1.5E-28 T 31-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like DY252_19355 e3265bb544a96590f2abdb9dcb646eb6 299 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 283 6.7E-33 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_00060 1b7bd0e1ede91f82b313a6fe68edf35e 237 Gene3D G3DSA:1.20.120.530 85 216 1.1E-25 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_00060 1b7bd0e1ede91f82b313a6fe68edf35e 237 Gene3D G3DSA:1.10.10.10 15 80 4.7E-22 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_00060 1b7bd0e1ede91f82b313a6fe68edf35e 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 79 3.6E-18 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_00060 1b7bd0e1ede91f82b313a6fe68edf35e 237 SMART SM00895 89 211 1.5E-17 T 31-10-2018 IPR011711 GntR, C-terminal DY252_00060 1b7bd0e1ede91f82b313a6fe68edf35e 237 SUPERFAMILY SSF48008 87 216 1.91E-24 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_00060 1b7bd0e1ede91f82b313a6fe68edf35e 237 Pfam PF07729 FCD domain 93 209 2.3E-23 T 31-10-2018 IPR011711 GntR, C-terminal DY252_00060 1b7bd0e1ede91f82b313a6fe68edf35e 237 SMART SM00345 21 79 8.9E-20 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_00060 1b7bd0e1ede91f82b313a6fe68edf35e 237 SUPERFAMILY SSF46785 12 83 1.53E-20 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_00060 1b7bd0e1ede91f82b313a6fe68edf35e 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 4.9E-6 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_00060 1b7bd0e1ede91f82b313a6fe68edf35e 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 4.9E-6 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_19310 eb0aa508eded0c6ee62ef8bcab220103 331 Pfam PF00248 Aldo/keto reductase family 18 319 1.0E-67 T 31-10-2018 IPR023210 NADP-dependent oxidoreductase domain DY252_19310 eb0aa508eded0c6ee62ef8bcab220103 331 Gene3D G3DSA:3.20.20.100 5 328 1.3E-105 T 31-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DY252_19310 eb0aa508eded0c6ee62ef8bcab220103 331 SUPERFAMILY SSF51430 6 323 2.1E-92 T 31-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DY252_06355 63edbbd0af1680a14f74bca65ae42b60 293 PIRSF PIRSF000401 54 293 5.0E-57 T 31-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DY252_06355 63edbbd0af1680a14f74bca65ae42b60 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 62 291 1.7E-54 T 31-10-2018 DY252_06355 63edbbd0af1680a14f74bca65ae42b60 293 SUPERFAMILY SSF53335 69 289 8.74E-35 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_06355 63edbbd0af1680a14f74bca65ae42b60 293 Gene3D G3DSA:3.40.50.150 95 293 4.2E-46 T 31-10-2018 DY252_04660 45e6936bc6cb09b1862ceeb883353a11 318 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 7 311 6.2E-107 T 31-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 DY252_04660 45e6936bc6cb09b1862ceeb883353a11 318 Pfam PF00561 alpha/beta hydrolase fold 34 297 2.6E-20 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_04660 45e6936bc6cb09b1862ceeb883353a11 318 PIRSF PIRSF006431 1 316 4.8E-119 T 31-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 DY252_04660 45e6936bc6cb09b1862ceeb883353a11 318 SUPERFAMILY SSF53474 2 296 3.13E-55 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_04660 45e6936bc6cb09b1862ceeb883353a11 318 Gene3D G3DSA:3.40.50.1820 1 315 1.1E-90 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_04660 45e6936bc6cb09b1862ceeb883353a11 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 61 72 2.1E-13 T 31-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DY252_04660 45e6936bc6cb09b1862ceeb883353a11 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 104 118 2.1E-13 T 31-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DY252_04660 45e6936bc6cb09b1862ceeb883353a11 318 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 35 43 2.1E-13 T 31-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DY252_02860 96e9d12d72c7bc1cd1e933ede0b1a3c6 631 Gene3D G3DSA:3.40.190.10 54 617 3.5E-242 T 31-10-2018 DY252_02860 96e9d12d72c7bc1cd1e933ede0b1a3c6 631 SUPERFAMILY SSF53850 76 620 6.7E-120 T 31-10-2018 DY252_02860 96e9d12d72c7bc1cd1e933ede0b1a3c6 631 Gene3D G3DSA:3.10.105.10 338 597 3.5E-242 T 31-10-2018 DY252_02860 96e9d12d72c7bc1cd1e933ede0b1a3c6 631 PIRSF PIRSF002741 39 622 1.3E-111 T 31-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DY252_02860 96e9d12d72c7bc1cd1e933ede0b1a3c6 631 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 125 532 4.2E-73 T 31-10-2018 IPR000914 Solute-binding protein family 5 domain DY252_06520 64c6d7119e62b412b4c4c4bc49aac8b2 247 SUPERFAMILY SSF47473 124 226 8.94E-13 T 31-10-2018 IPR011992 EF-hand domain pair DY252_06520 64c6d7119e62b412b4c4c4bc49aac8b2 247 Gene3D G3DSA:1.10.238.10 131 227 4.1E-10 T 31-10-2018 DY252_06520 64c6d7119e62b412b4c4c4bc49aac8b2 247 ProSitePatterns PS00018 EF-hand calcium-binding domain. 206 218 - T 31-10-2018 IPR018247 EF-Hand 1, calcium-binding site DY252_00445 0a0bf0138f92713adabe2c5cc21a237e 138 ProSitePatterns PS00552 MerR-type HTH domain signature. 13 35 - T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00445 0a0bf0138f92713adabe2c5cc21a237e 138 Gene3D G3DSA:1.10.1660.10 3 134 5.1E-33 T 31-10-2018 DY252_00445 0a0bf0138f92713adabe2c5cc21a237e 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 46 66 6.8E-9 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00445 0a0bf0138f92713adabe2c5cc21a237e 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 22 35 6.8E-9 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00445 0a0bf0138f92713adabe2c5cc21a237e 138 Pfam PF09278 MerR, DNA binding 53 116 2.0E-18 T 31-10-2018 IPR015358 Transcription regulator MerR, DNA binding DY252_00445 0a0bf0138f92713adabe2c5cc21a237e 138 SMART SM00422 10 79 3.2E-21 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00445 0a0bf0138f92713adabe2c5cc21a237e 138 SUPERFAMILY SSF46955 13 135 3.11E-33 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_00445 0a0bf0138f92713adabe2c5cc21a237e 138 Pfam PF00376 MerR family regulatory protein 14 48 4.6E-10 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_06005 aa5e4427f7f9c5791c81c474322a2a54 336 Gene3D G3DSA:3.40.50.2300 71 305 5.3E-66 T 31-10-2018 DY252_06005 aa5e4427f7f9c5791c81c474322a2a54 336 Gene3D G3DSA:1.10.260.40 1 60 7.4E-14 T 31-10-2018 DY252_06005 aa5e4427f7f9c5791c81c474322a2a54 336 SUPERFAMILY SSF53822 71 330 1.08E-65 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_06005 aa5e4427f7f9c5791c81c474322a2a54 336 SMART SM00354 1 71 4.7E-6 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_06005 aa5e4427f7f9c5791c81c474322a2a54 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 1 19 - T 31-10-2018 DY252_06005 aa5e4427f7f9c5791c81c474322a2a54 336 Gene3D G3DSA:3.40.50.2300 160 289 5.3E-66 T 31-10-2018 DY252_06005 aa5e4427f7f9c5791c81c474322a2a54 336 SUPERFAMILY SSF47413 1 45 6.75E-10 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_06005 aa5e4427f7f9c5791c81c474322a2a54 336 Pfam PF13377 Periplasmic binding protein-like domain 168 329 5.3E-35 T 31-10-2018 DY252_06005 aa5e4427f7f9c5791c81c474322a2a54 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 44 1.4E-11 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_14530 4a2f19802bad6deba55aafae757d5257 112 SUPERFAMILY SSF54913 1 112 1.91E-46 T 31-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DY252_14530 4a2f19802bad6deba55aafae757d5257 112 Gene3D G3DSA:3.30.70.120 1 112 3.5E-49 T 31-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DY252_14530 4a2f19802bad6deba55aafae757d5257 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 31-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 DY252_14530 4a2f19802bad6deba55aafae757d5257 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 31-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 DY252_14530 4a2f19802bad6deba55aafae757d5257 112 PRINTS PR00340 P-II protein signature 2 17 2.2E-44 T 31-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DY252_14530 4a2f19802bad6deba55aafae757d5257 112 PRINTS PR00340 P-II protein signature 23 41 2.2E-44 T 31-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DY252_14530 4a2f19802bad6deba55aafae757d5257 112 PRINTS PR00340 P-II protein signature 52 75 2.2E-44 T 31-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DY252_14530 4a2f19802bad6deba55aafae757d5257 112 PRINTS PR00340 P-II protein signature 83 103 2.2E-44 T 31-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DY252_14530 4a2f19802bad6deba55aafae757d5257 112 SMART SM00938 4 105 7.6E-68 T 31-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DY252_14530 4a2f19802bad6deba55aafae757d5257 112 PIRSF PIRSF039144 1 112 4.6E-55 T 31-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DY252_14530 4a2f19802bad6deba55aafae757d5257 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.8E-43 T 31-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DY252_12880 0bc5467203861dd0c17f0d377b153015 382 Gene3D G3DSA:3.40.140.10 8 152 3.8E-40 T 31-10-2018 DY252_12880 0bc5467203861dd0c17f0d377b153015 382 Pfam PF01872 RibD C-terminal domain 164 374 2.7E-49 T 31-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 DY252_12880 0bc5467203861dd0c17f0d377b153015 382 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 163 377 4.5E-59 T 31-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 DY252_12880 0bc5467203861dd0c17f0d377b153015 382 Gene3D G3DSA:3.40.430.10 153 381 5.1E-70 T 31-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DY252_12880 0bc5467203861dd0c17f0d377b153015 382 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 17 115 6.4E-15 T 31-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DY252_12880 0bc5467203861dd0c17f0d377b153015 382 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 105 - T 31-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DY252_12880 0bc5467203861dd0c17f0d377b153015 382 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 23 375 4.1E-110 T 31-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 DY252_12880 0bc5467203861dd0c17f0d377b153015 382 SUPERFAMILY SSF53927 19 158 2.68E-42 T 31-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DY252_12880 0bc5467203861dd0c17f0d377b153015 382 SUPERFAMILY SSF53597 164 377 1.24E-55 T 31-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DY252_12880 0bc5467203861dd0c17f0d377b153015 382 PIRSF PIRSF006769 15 381 2.6E-125 T 31-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 DY252_04385 4e1bbf93af510b6a070764f4ebf7056e 571 Gene3D G3DSA:1.25.40.10 261 558 1.7E-55 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_04385 4e1bbf93af510b6a070764f4ebf7056e 571 Pfam PF13414 TPR repeat 490 529 1.3E-11 T 31-10-2018 DY252_04385 4e1bbf93af510b6a070764f4ebf7056e 571 SUPERFAMILY SSF48452 373 547 5.61E-37 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_04385 4e1bbf93af510b6a070764f4ebf7056e 571 SUPERFAMILY SSF48452 18 252 1.42E-9 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_04385 4e1bbf93af510b6a070764f4ebf7056e 571 SMART SM00028 515 548 13.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_04385 4e1bbf93af510b6a070764f4ebf7056e 571 SMART SM00028 211 244 270.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_04385 4e1bbf93af510b6a070764f4ebf7056e 571 SMART SM00028 40 73 75.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_04385 4e1bbf93af510b6a070764f4ebf7056e 571 SMART SM00028 412 445 1.6E-5 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_04385 4e1bbf93af510b6a070764f4ebf7056e 571 SMART SM00028 272 305 110.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_04385 4e1bbf93af510b6a070764f4ebf7056e 571 SMART SM00028 481 514 0.0026 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_04385 4e1bbf93af510b6a070764f4ebf7056e 571 SMART SM00028 374 407 0.63 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_04385 4e1bbf93af510b6a070764f4ebf7056e 571 SMART SM00028 446 480 7.2 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_04385 4e1bbf93af510b6a070764f4ebf7056e 571 Gene3D G3DSA:1.25.40.10 41 259 3.3E-15 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_04385 4e1bbf93af510b6a070764f4ebf7056e 571 Pfam PF07719 Tetratricopeptide repeat 413 444 2.5E-6 T 31-10-2018 IPR013105 Tetratricopeptide repeat 2 DY252_04385 4e1bbf93af510b6a070764f4ebf7056e 571 SUPERFAMILY SSF48452 271 403 1.47E-15 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_04385 4e1bbf93af510b6a070764f4ebf7056e 571 Pfam PF13432 Tetratricopeptide repeat 349 402 0.011 T 31-10-2018 DY252_06555 f2289cc4508ac1ea1bd4b3d0354c6ba1 607 Pfam PF16326 ABC transporter C-terminal domain 530 598 6.9E-20 T 31-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 DY252_06555 f2289cc4508ac1ea1bd4b3d0354c6ba1 607 SUPERFAMILY SSF52540 279 492 1.43E-47 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_06555 f2289cc4508ac1ea1bd4b3d0354c6ba1 607 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_06555 f2289cc4508ac1ea1bd4b3d0354c6ba1 607 Pfam PF00005 ABC transporter 22 150 1.1E-21 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_06555 f2289cc4508ac1ea1bd4b3d0354c6ba1 607 Pfam PF00005 ABC transporter 302 435 2.5E-22 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_06555 f2289cc4508ac1ea1bd4b3d0354c6ba1 607 SMART SM00382 30 195 7.9E-15 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_06555 f2289cc4508ac1ea1bd4b3d0354c6ba1 607 SMART SM00382 309 481 1.1E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_06555 f2289cc4508ac1ea1bd4b3d0354c6ba1 607 Gene3D G3DSA:1.10.287.380 519 603 1.1E-22 T 31-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DY252_06555 f2289cc4508ac1ea1bd4b3d0354c6ba1 607 SUPERFAMILY SSF52540 4 196 2.49E-45 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_06555 f2289cc4508ac1ea1bd4b3d0354c6ba1 607 Gene3D G3DSA:3.40.50.300 1 228 3.7E-54 T 31-10-2018 DY252_06555 f2289cc4508ac1ea1bd4b3d0354c6ba1 607 Gene3D G3DSA:3.40.50.300 246 518 9.7E-63 T 31-10-2018 DY252_04960 5cb04c9e0ac8b51a87188e415ade1d52 330 SUPERFAMILY SSF158997 4 66 3.66E-6 T 31-10-2018 DY252_04960 5cb04c9e0ac8b51a87188e415ade1d52 330 Pfam PF08241 Methyltransferase domain 109 201 2.6E-13 T 31-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DY252_04960 5cb04c9e0ac8b51a87188e415ade1d52 330 SUPERFAMILY SSF53335 72 324 8.89E-27 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_09035 9259d25d253854b19f55aead53aa474a 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 31-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09035 9259d25d253854b19f55aead53aa474a 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.936 T 31-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid DY252_09035 9259d25d253854b19f55aead53aa474a 101 SUPERFAMILY SSF57716 2 101 2.49E-36 T 31-10-2018 DY252_09035 9259d25d253854b19f55aead53aa474a 101 Gene3D G3DSA:4.10.830.10 40 101 1.4E-23 T 31-10-2018 DY252_09035 9259d25d253854b19f55aead53aa474a 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 7.0E-25 T 31-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_20430 efede71ae16ad48709072203e8ac8c5e 250 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 43 57 - T 31-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DY252_20430 efede71ae16ad48709072203e8ac8c5e 250 Gene3D G3DSA:3.30.70.580 1 71 4.8E-25 T 31-10-2018 DY252_20430 efede71ae16ad48709072203e8ac8c5e 250 Pfam PF00849 RNA pseudouridylate synthase 7 153 1.5E-14 T 31-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_20430 efede71ae16ad48709072203e8ac8c5e 250 SUPERFAMILY SSF55120 7 194 1.55E-41 T 31-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_20430 efede71ae16ad48709072203e8ac8c5e 250 Gene3D G3DSA:3.30.70.1560 72 172 2.2E-41 T 31-10-2018 DY252_20430 efede71ae16ad48709072203e8ac8c5e 250 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 11 182 7.4E-54 T 31-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DY252_00915 8a9ad397e0c069b019746270d3d6575a 227 Gene3D G3DSA:3.40.50.10230 1 208 1.7E-79 T 31-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 DY252_00915 8a9ad397e0c069b019746270d3d6575a 227 Pfam PF02570 Precorrin-8X methylmutase 10 206 8.6E-70 T 31-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 DY252_00915 8a9ad397e0c069b019746270d3d6575a 227 SUPERFAMILY SSF63965 1 208 8.37E-70 T 31-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 DY252_02770 19547fe04988ac5fac7a5cefb302906e 257 Gene3D G3DSA:3.40.50.720 1 156 8.6E-26 T 31-10-2018 DY252_02770 19547fe04988ac5fac7a5cefb302906e 257 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 94 3.2E-14 T 31-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DY252_02770 19547fe04988ac5fac7a5cefb302906e 257 SUPERFAMILY SSF51735 1 135 2.1E-19 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_02770 19547fe04988ac5fac7a5cefb302906e 257 PIRSF PIRSF000193 1 257 2.4E-37 T 31-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DY252_07480 8a5478be49e922c9c142846bdc966143 74 ProSitePatterns PS01143 Ribosomal protein L31 signature. 38 59 - T 31-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_07480 8a5478be49e922c9c142846bdc966143 74 Pfam PF01197 Ribosomal protein L31 1 68 2.0E-26 T 31-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_07480 8a5478be49e922c9c142846bdc966143 74 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 69 1.9E-33 T 31-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_07480 8a5478be49e922c9c142846bdc966143 74 SUPERFAMILY SSF143800 1 70 1.37E-22 T 31-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_07480 8a5478be49e922c9c142846bdc966143 74 Gene3D G3DSA:2.30.170.50 1 71 7.5E-24 T 31-10-2018 DY252_07480 8a5478be49e922c9c142846bdc966143 74 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 71 24.723 T 31-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_07480 8a5478be49e922c9c142846bdc966143 74 PRINTS PR01249 Ribosomal protein L31 signature 49 67 4.0E-13 T 31-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_07480 8a5478be49e922c9c142846bdc966143 74 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.0E-13 T 31-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_07480 8a5478be49e922c9c142846bdc966143 74 PRINTS PR01249 Ribosomal protein L31 signature 34 49 4.0E-13 T 31-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_13105 a5e5f7076313b8bc705f44159845978b 202 Pfam PF01936 NYN domain 8 165 2.5E-38 T 31-10-2018 IPR021139 NYN domain, limkain-b1-type DY252_13105 a5e5f7076313b8bc705f44159845978b 202 Gene3D G3DSA:3.40.50.1010 3 168 1.1E-53 T 31-10-2018 DY252_16770 f91bb190626fcd7d9ac3875fdd8e760b 285 SUPERFAMILY SSF46689 235 281 3.07E-10 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_16770 f91bb190626fcd7d9ac3875fdd8e760b 285 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 235 276 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_16770 f91bb190626fcd7d9ac3875fdd8e760b 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 1.8E-5 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_16770 f91bb190626fcd7d9ac3875fdd8e760b 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 1.8E-5 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_16770 f91bb190626fcd7d9ac3875fdd8e760b 285 Gene3D G3DSA:2.60.120.10 1 98 9.1E-6 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_16770 f91bb190626fcd7d9ac3875fdd8e760b 285 Gene3D G3DSA:1.10.10.60 177 284 7.8E-32 T 31-10-2018 DY252_16770 f91bb190626fcd7d9ac3875fdd8e760b 285 Pfam PF12833 Helix-turn-helix domain 204 281 2.5E-22 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_16770 f91bb190626fcd7d9ac3875fdd8e760b 285 SUPERFAMILY SSF46689 180 232 4.48E-14 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_16770 f91bb190626fcd7d9ac3875fdd8e760b 285 SUPERFAMILY SSF51215 31 142 1.44E-16 T 31-10-2018 IPR037923 Transcription regulator HTH-like DY252_16770 f91bb190626fcd7d9ac3875fdd8e760b 285 Pfam PF02311 AraC-like ligand binding domain 32 140 9.0E-16 T 31-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DY252_16770 f91bb190626fcd7d9ac3875fdd8e760b 285 SMART SM00342 198 280 1.1E-29 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_01865 c0e7ec01d977a63f4b65fd31c2c6d92f 502 PIRSF PIRSF016636 1 502 6.3E-138 T 31-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB DY252_01865 c0e7ec01d977a63f4b65fd31c2c6d92f 502 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 148 365 9.5E-28 T 31-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT DY252_01865 c0e7ec01d977a63f4b65fd31c2c6d92f 502 PIRSF PIRSF500217 1 502 4.0E-137 T 31-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 DY252_10735 5f64b3bf396d751d38f6d5dbe0c9df03 104 Gene3D G3DSA:1.10.3990.20 8 103 4.9E-31 T 31-10-2018 IPR038268 Ribbon-helix-helix domain superfamily DY252_10735 5f64b3bf396d751d38f6d5dbe0c9df03 104 Pfam PF13467 Ribbon-helix-helix domain 16 83 3.4E-22 T 31-10-2018 IPR027373 Ribbon-helix-helix domain DY252_01665 27fa435f160ff23b804f2fb9b12fa9d8 356 SUPERFAMILY SSF56935 18 356 1.83E-27 T 31-10-2018 DY252_01665 27fa435f160ff23b804f2fb9b12fa9d8 356 Pfam PF13609 Gram-negative porin 10 330 5.8E-40 T 31-10-2018 DY252_01665 27fa435f160ff23b804f2fb9b12fa9d8 356 Gene3D G3DSA:2.40.160.10 30 356 1.2E-44 T 31-10-2018 IPR023614 Porin domain superfamily DY252_11185 d5c06e7b24ffc3838aa8f8900f941392 236 SUPERFAMILY SSF55186 96 233 4.58E-29 T 31-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DY252_11185 d5c06e7b24ffc3838aa8f8900f941392 236 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 188 230 1.3E-11 T 31-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DY252_11185 d5c06e7b24ffc3838aa8f8900f941392 236 SMART SM00863 188 231 1.3E-12 T 31-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DY252_11185 d5c06e7b24ffc3838aa8f8900f941392 236 SUPERFAMILY SSF50447 1 90 1.59E-15 T 31-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DY252_11185 d5c06e7b24ffc3838aa8f8900f941392 236 Pfam PF01411 tRNA synthetases class II (A) 15 94 1.3E-9 T 31-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 DY252_11185 d5c06e7b24ffc3838aa8f8900f941392 236 Gene3D G3DSA:2.40.30.130 1 91 2.0E-17 T 31-10-2018 DY252_11185 d5c06e7b24ffc3838aa8f8900f941392 236 Gene3D G3DSA:3.30.980.10 92 236 8.7E-29 T 31-10-2018 DY252_19005 5f4db274cfd2372a0506c68ba0ac74ed 370 Gene3D G3DSA:3.10.180.10 14 162 1.6E-43 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_19005 5f4db274cfd2372a0506c68ba0ac74ed 370 SUPERFAMILY SSF54593 16 351 1.06E-76 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_19005 5f4db274cfd2372a0506c68ba0ac74ed 370 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 168 281 3.9E-16 T 31-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DY252_19005 5f4db274cfd2372a0506c68ba0ac74ed 370 Gene3D G3DSA:3.10.180.10 163 365 7.7E-63 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_19005 5f4db274cfd2372a0506c68ba0ac74ed 370 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 16 151 1.6E-50 T 31-10-2018 DY252_19005 5f4db274cfd2372a0506c68ba0ac74ed 370 PIRSF PIRSF009283 8 365 4.8E-107 T 31-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 DY252_19005 5f4db274cfd2372a0506c68ba0ac74ed 370 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 23 364 2.7E-123 T 31-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 DY252_07030 d5871f8875cc4fa00ec7470837dc3d86 375 Pfam PF01145 SPFH domain / Band 7 family 84 272 8.1E-23 T 31-10-2018 IPR001107 Band 7 domain DY252_07030 d5871f8875cc4fa00ec7470837dc3d86 375 Pfam PF12221 Bacterial membrane protein N terminal 17 60 1.5E-10 T 31-10-2018 IPR020980 Menbrane protein HflK, N-terminal DY252_07030 d5871f8875cc4fa00ec7470837dc3d86 375 SUPERFAMILY SSF117892 146 266 7.85E-22 T 31-10-2018 IPR036013 Band 7/SPFH domain superfamily DY252_07030 d5871f8875cc4fa00ec7470837dc3d86 375 SMART SM00244 80 259 1.3E-28 T 31-10-2018 IPR001107 Band 7 domain DY252_07030 d5871f8875cc4fa00ec7470837dc3d86 375 Gene3D G3DSA:3.30.479.30 140 250 3.8E-21 T 31-10-2018 DY252_07030 d5871f8875cc4fa00ec7470837dc3d86 375 TIGRFAM TIGR01933 hflK: HflK protein 82 353 3.4E-80 T 31-10-2018 IPR010201 HflK GO:0016021 DY252_08995 c539355aeed0b802c34826586b1d7575 126 ProSitePatterns PS00464 Ribosomal protein L22 signature. 95 119 - T 31-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_08995 c539355aeed0b802c34826586b1d7575 126 Gene3D G3DSA:3.90.470.10 3 126 7.8E-41 T 31-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 DY252_08995 c539355aeed0b802c34826586b1d7575 126 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 17 119 4.2E-29 T 31-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_08995 c539355aeed0b802c34826586b1d7575 126 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 13 122 23.911 T 31-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_08995 c539355aeed0b802c34826586b1d7575 126 Pfam PF00237 Ribosomal protein L22p/L17e 17 119 9.2E-33 T 31-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 DY252_08995 c539355aeed0b802c34826586b1d7575 126 SUPERFAMILY SSF54843 12 124 5.36E-39 T 31-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 DY252_01320 3dfa4ddba4646c5a22cfc56af3112b45 315 Gene3D G3DSA:3.40.190.10 91 189 8.3E-26 T 31-10-2018 DY252_01320 3dfa4ddba4646c5a22cfc56af3112b45 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 2.3E-17 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_01320 3dfa4ddba4646c5a22cfc56af3112b45 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 5.5E-7 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_01320 3dfa4ddba4646c5a22cfc56af3112b45 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 5.5E-7 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_01320 3dfa4ddba4646c5a22cfc56af3112b45 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 5.5E-7 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_01320 3dfa4ddba4646c5a22cfc56af3112b45 315 Pfam PF03466 LysR substrate binding domain 95 305 6.6E-33 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_01320 3dfa4ddba4646c5a22cfc56af3112b45 315 SUPERFAMILY SSF53850 96 309 3.8E-33 T 31-10-2018 DY252_01320 3dfa4ddba4646c5a22cfc56af3112b45 315 Gene3D G3DSA:1.10.10.10 9 90 3.1E-22 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_01320 3dfa4ddba4646c5a22cfc56af3112b45 315 Gene3D G3DSA:3.40.190.10 190 279 8.7E-24 T 31-10-2018 DY252_01320 3dfa4ddba4646c5a22cfc56af3112b45 315 SUPERFAMILY SSF46785 7 85 6.42E-20 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_08690 c2f5f55bebfe60d3b820a40fa8a4992e 329 SMART SM00342 196 279 6.4E-29 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_08690 c2f5f55bebfe60d3b820a40fa8a4992e 329 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 233 275 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_08690 c2f5f55bebfe60d3b820a40fa8a4992e 329 Gene3D G3DSA:1.10.10.60 177 229 3.5E-13 T 31-10-2018 DY252_08690 c2f5f55bebfe60d3b820a40fa8a4992e 329 SUPERFAMILY SSF46689 179 230 1.61E-11 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_08690 c2f5f55bebfe60d3b820a40fa8a4992e 329 SUPERFAMILY SSF46689 232 285 2.33E-11 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_08690 c2f5f55bebfe60d3b820a40fa8a4992e 329 Pfam PF12833 Helix-turn-helix domain 202 280 3.0E-21 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_08690 c2f5f55bebfe60d3b820a40fa8a4992e 329 Gene3D G3DSA:1.10.10.60 230 284 5.6E-15 T 31-10-2018 DY252_04640 898a50cc2da9f7d7d7d23d9d83045166 166 Gene3D G3DSA:2.30.30.840 1 67 3.2E-25 T 31-10-2018 DY252_04640 898a50cc2da9f7d7d7d23d9d83045166 166 Pfam PF02559 CarD-like/TRCF domain 7 115 3.0E-20 T 31-10-2018 IPR003711 CarD-like/TRCF domain DY252_04640 898a50cc2da9f7d7d7d23d9d83045166 166 Gene3D G3DSA:1.20.58.1290 68 163 1.9E-26 T 31-10-2018 DY252_04640 898a50cc2da9f7d7d7d23d9d83045166 166 SMART SM01058 6 116 6.0E-36 T 31-10-2018 IPR003711 CarD-like/TRCF domain DY252_04640 898a50cc2da9f7d7d7d23d9d83045166 166 SUPERFAMILY SSF141259 3 71 3.27E-16 T 31-10-2018 IPR036101 CarD-like/TRCF domain superfamily DY252_05705 afd1dbc0070d6469a92ebe8a38287096 97 Gene3D G3DSA:2.60.200.60 3 95 2.6E-27 T 31-10-2018 DY252_05705 afd1dbc0070d6469a92ebe8a38287096 97 Pfam PF05488 PAAR motif 24 86 2.1E-8 T 31-10-2018 IPR008727 PAAR motif DY252_19945 83b585d9e210c42b0e01ac5fb21545c8 495 SUPERFAMILY SSF47364 1 89 3.44E-26 T 31-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 DY252_19945 83b585d9e210c42b0e01ac5fb21545c8 495 SUPERFAMILY SSF52540 90 297 4.06E-51 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_19945 83b585d9e210c42b0e01ac5fb21545c8 495 Pfam PF00448 SRP54-type protein, GTPase domain 102 295 1.3E-68 T 31-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DY252_19945 83b585d9e210c42b0e01ac5fb21545c8 495 Gene3D G3DSA:3.40.50.300 90 284 3.8E-116 T 31-10-2018 DY252_19945 83b585d9e210c42b0e01ac5fb21545c8 495 Gene3D G3DSA:1.20.120.140 5 305 3.8E-116 T 31-10-2018 DY252_19945 83b585d9e210c42b0e01ac5fb21545c8 495 Pfam PF02978 Signal peptide binding domain 326 426 3.1E-32 T 31-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DY252_19945 83b585d9e210c42b0e01ac5fb21545c8 495 SUPERFAMILY SSF47446 297 430 7.85E-47 T 31-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DY252_19945 83b585d9e210c42b0e01ac5fb21545c8 495 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.2E-19 T 31-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DY252_19945 83b585d9e210c42b0e01ac5fb21545c8 495 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 445 32.562 T 31-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 DY252_19945 83b585d9e210c42b0e01ac5fb21545c8 495 SMART SM00382 98 300 2.4E-6 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_19945 83b585d9e210c42b0e01ac5fb21545c8 495 SMART SM00963 1 86 1.2E-33 T 31-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DY252_19945 83b585d9e210c42b0e01ac5fb21545c8 495 SMART SM00962 99 295 8.1E-103 T 31-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DY252_19945 83b585d9e210c42b0e01ac5fb21545c8 495 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 428 2.0E-176 T 31-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 DY252_19945 83b585d9e210c42b0e01ac5fb21545c8 495 Gene3D G3DSA:1.10.260.30 309 441 3.4E-42 T 31-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DY252_04705 040937261de819d3a25168f201b568ad 364 Gene3D G3DSA:3.40.50.300 5 227 1.4E-67 T 31-10-2018 DY252_04705 040937261de819d3a25168f201b568ad 364 Gene3D G3DSA:2.40.50.940 228 360 8.2E-14 T 31-10-2018 DY252_04705 040937261de819d3a25168f201b568ad 364 Pfam PF00005 ABC transporter 25 167 1.9E-34 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_04705 040937261de819d3a25168f201b568ad 364 SUPERFAMILY SSF52540 6 250 6.76E-86 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_04705 040937261de819d3a25168f201b568ad 364 Gene3D G3DSA:2.40.50.140 291 354 8.2E-14 T 31-10-2018 DY252_04705 040937261de819d3a25168f201b568ad 364 SMART SM00382 34 217 8.1E-19 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_04705 040937261de819d3a25168f201b568ad 364 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_04705 040937261de819d3a25168f201b568ad 364 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 40 362 7.0E-118 T 31-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 DY252_04705 040937261de819d3a25168f201b568ad 364 Pfam PF08402 TOBE domain 284 362 9.2E-17 T 31-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DY252_04705 040937261de819d3a25168f201b568ad 364 SUPERFAMILY SSF50331 242 362 5.27E-15 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_02400 9cd3ee0f103664dec56dbe2a24f1984f 448 Gene3D G3DSA:1.10.940.10 20 157 2.3E-27 T 31-10-2018 IPR035926 NusB-like superfamily DY252_02400 9cd3ee0f103664dec56dbe2a24f1984f 448 Pfam PF01029 NusB family 24 144 1.3E-19 T 31-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DY252_02400 9cd3ee0f103664dec56dbe2a24f1984f 448 Pfam PF01189 16S rRNA methyltransferase RsmB/F 252 444 1.2E-44 T 31-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 DY252_02400 9cd3ee0f103664dec56dbe2a24f1984f 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 321 333 7.1E-24 T 31-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DY252_02400 9cd3ee0f103664dec56dbe2a24f1984f 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 429 446 7.1E-24 T 31-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DY252_02400 9cd3ee0f103664dec56dbe2a24f1984f 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 371 387 7.1E-24 T 31-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DY252_02400 9cd3ee0f103664dec56dbe2a24f1984f 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 230 244 7.1E-24 T 31-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DY252_02400 9cd3ee0f103664dec56dbe2a24f1984f 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 259 269 7.1E-24 T 31-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DY252_02400 9cd3ee0f103664dec56dbe2a24f1984f 448 SUPERFAMILY SSF48013 24 164 3.92E-27 T 31-10-2018 IPR035926 NusB-like superfamily DY252_02400 9cd3ee0f103664dec56dbe2a24f1984f 448 SUPERFAMILY SSF53335 160 447 3.7E-56 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_02400 9cd3ee0f103664dec56dbe2a24f1984f 448 Gene3D G3DSA:3.40.50.150 247 448 8.0E-52 T 31-10-2018 DY252_07595 72c9026ffa1b66a3be17e4de39f77375 391 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 15 361 4.6E-178 T 31-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 DY252_07595 72c9026ffa1b66a3be17e4de39f77375 391 Pfam PF00296 Luciferase-like monooxygenase 15 337 8.9E-86 T 31-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DY252_07595 72c9026ffa1b66a3be17e4de39f77375 391 SUPERFAMILY SSF51679 14 361 2.22E-93 T 31-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DY252_07595 72c9026ffa1b66a3be17e4de39f77375 391 Gene3D G3DSA:3.20.20.30 13 372 3.5E-141 T 31-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DY252_07595 72c9026ffa1b66a3be17e4de39f77375 391 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 14 387 72.626 T 31-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 DY252_16240 ccdb94b1d9bb89b0c10bf2d6e6cc0087 168 Pfam PF00583 Acetyltransferase (GNAT) family 31 123 1.1E-6 T 31-10-2018 IPR000182 GNAT domain DY252_16240 ccdb94b1d9bb89b0c10bf2d6e6cc0087 168 SUPERFAMILY SSF55729 30 127 5.75E-15 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_16240 ccdb94b1d9bb89b0c10bf2d6e6cc0087 168 Gene3D G3DSA:3.40.630.30 11 166 6.6E-27 T 31-10-2018 DY252_18365 e17087b05dc5ebaaf00ae0e1dd7ddf15 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 155 2.7E-20 T 31-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DY252_18365 e17087b05dc5ebaaf00ae0e1dd7ddf15 175 Pfam PF08281 Sigma-70, region 4 104 154 1.4E-12 T 31-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DY252_18365 e17087b05dc5ebaaf00ae0e1dd7ddf15 175 SUPERFAMILY SSF88659 96 157 3.14E-13 T 31-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DY252_18365 e17087b05dc5ebaaf00ae0e1dd7ddf15 175 Pfam PF04542 Sigma-70 region 2 9 74 7.5E-14 T 31-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DY252_18365 e17087b05dc5ebaaf00ae0e1dd7ddf15 175 Gene3D G3DSA:1.10.1740.10 1 77 7.4E-22 T 31-10-2018 DY252_18365 e17087b05dc5ebaaf00ae0e1dd7ddf15 175 SUPERFAMILY SSF88946 9 85 6.67E-19 T 31-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DY252_18365 e17087b05dc5ebaaf00ae0e1dd7ddf15 175 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 30 61 - T 31-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DY252_18365 e17087b05dc5ebaaf00ae0e1dd7ddf15 175 Gene3D G3DSA:1.10.10.10 97 159 1.6E-15 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_13340 4826243e4665743a0311ae7182402709 367 Pfam PF13180 PDZ domain 132 197 1.3E-8 T 31-10-2018 IPR001478 PDZ domain GO:0005515 DY252_13340 4826243e4665743a0311ae7182402709 367 SMART SM00228 120 189 1.1E-8 T 31-10-2018 IPR001478 PDZ domain GO:0005515 DY252_13340 4826243e4665743a0311ae7182402709 367 Pfam PF02163 Peptidase family M50 6 344 1.1E-80 T 31-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 DY252_13340 4826243e4665743a0311ae7182402709 367 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 131 356 1.4E-54 T 31-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 DY252_13340 4826243e4665743a0311ae7182402709 367 SUPERFAMILY SSF50156 92 199 4.47E-20 T 31-10-2018 IPR036034 PDZ superfamily GO:0005515 DY252_13340 4826243e4665743a0311ae7182402709 367 Gene3D G3DSA:2.30.42.10 131 221 6.5E-22 T 31-10-2018 DY252_19515 edfa47b158aa30d6bfb9153300a1d2bb 189 Pfam PF11136 Protein of unknown function (DUF2889) 13 136 2.0E-45 T 31-10-2018 IPR021312 Protein of unknown function DUF2889 DY252_01615 8a3e22a92cb395884572caaab09c2929 457 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 221 379 8.7E-22 T 31-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DY252_01615 8a3e22a92cb395884572caaab09c2929 457 Gene3D G3DSA:3.40.50.300 221 389 4.6E-106 T 31-10-2018 DY252_01615 8a3e22a92cb395884572caaab09c2929 457 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 124 5.9E-37 T 31-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 DY252_01615 8a3e22a92cb395884572caaab09c2929 457 Pfam PF12631 MnmE helical domain 127 454 7.9E-52 T 31-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 DY252_01615 8a3e22a92cb395884572caaab09c2929 457 SUPERFAMILY SSF52540 76 378 8.5E-42 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_01615 8a3e22a92cb395884572caaab09c2929 457 Gene3D G3DSA:3.30.1360.120 1 125 7.0E-42 T 31-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DY252_01615 8a3e22a92cb395884572caaab09c2929 457 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 457 32.129 T 31-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 DY252_01615 8a3e22a92cb395884572caaab09c2929 457 Gene3D G3DSA:1.20.120.430 126 457 4.6E-106 T 31-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 DY252_01615 8a3e22a92cb395884572caaab09c2929 457 Pfam PF01926 50S ribosome-binding GTPase 222 333 6.3E-23 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_01615 8a3e22a92cb395884572caaab09c2929 457 SUPERFAMILY SSF116878 125 457 9.02E-47 T 31-10-2018 DY252_01615 8a3e22a92cb395884572caaab09c2929 457 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 18 457 3.3E-86 T 31-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 DY252_15320 861877e1a94f5f27735fcbb0e8ce2508 326 Gene3D G3DSA:3.40.190.10 39 252 1.2E-49 T 31-10-2018 DY252_15320 861877e1a94f5f27735fcbb0e8ce2508 326 Gene3D G3DSA:3.40.190.10 118 216 1.2E-49 T 31-10-2018 DY252_15320 861877e1a94f5f27735fcbb0e8ce2508 326 Pfam PF09084 NMT1/THI5 like 47 252 7.4E-41 T 31-10-2018 IPR015168 SsuA/THI5-like DY252_15320 861877e1a94f5f27735fcbb0e8ce2508 326 SUPERFAMILY SSF53850 50 245 2.68E-20 T 31-10-2018 DY252_18700 72ec1e987dbbe091b5a1391a8ae87c90 465 SUPERFAMILY SSF46785 12 80 1.06E-15 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_18700 72ec1e987dbbe091b5a1391a8ae87c90 465 SMART SM00345 19 78 3.3E-12 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_18700 72ec1e987dbbe091b5a1391a8ae87c90 465 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 5.3E-13 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_18700 72ec1e987dbbe091b5a1391a8ae87c90 465 SUPERFAMILY SSF53383 73 453 5.98E-60 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_18700 72ec1e987dbbe091b5a1391a8ae87c90 465 Gene3D G3DSA:3.40.640.10 134 349 2.8E-51 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_18700 72ec1e987dbbe091b5a1391a8ae87c90 465 Gene3D G3DSA:3.90.1150.10 95 436 2.8E-51 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_18700 72ec1e987dbbe091b5a1391a8ae87c90 465 Gene3D G3DSA:1.10.10.10 9 79 1.1E-18 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_18700 72ec1e987dbbe091b5a1391a8ae87c90 465 Pfam PF00155 Aminotransferase class I and II 163 445 5.7E-12 T 31-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DY252_15205 4bebaa360609831b1ee1f259871a6e0a 289 SMART SM00650 44 216 1.4E-63 T 31-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 DY252_15205 4bebaa360609831b1ee1f259871a6e0a 289 SUPERFAMILY SSF53335 26 285 4.62E-73 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_15205 4bebaa360609831b1ee1f259871a6e0a 289 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 60 88 - T 31-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 DY252_15205 4bebaa360609831b1ee1f259871a6e0a 289 Gene3D G3DSA:3.40.50.150 6 217 1.7E-68 T 31-10-2018 DY252_15205 4bebaa360609831b1ee1f259871a6e0a 289 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 29 281 9.6E-75 T 31-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 DY252_15205 4bebaa360609831b1ee1f259871a6e0a 289 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 28 284 50.598 T 31-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 DY252_15205 4bebaa360609831b1ee1f259871a6e0a 289 Pfam PF00398 Ribosomal RNA adenine dimethylase 30 281 1.1E-52 T 31-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DY252_15205 4bebaa360609831b1ee1f259871a6e0a 289 Gene3D G3DSA:1.10.8.100 221 282 2.0E-20 T 31-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 DY252_15900 45cdc6f83e799fed87aec6da356f8b08 505 Gene3D G3DSA:3.30.420.10 276 494 1.1E-29 T 31-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DY252_15900 45cdc6f83e799fed87aec6da356f8b08 505 SUPERFAMILY SSF53098 6 505 7.59E-60 T 31-10-2018 IPR012337 Ribonuclease H-like superfamily DY252_02785 20ae4cf43e13867505db9733c1121e91 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 8.3E-14 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_02785 20ae4cf43e13867505db9733c1121e91 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 8.3E-14 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_02785 20ae4cf43e13867505db9733c1121e91 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 8.3E-14 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_02785 20ae4cf43e13867505db9733c1121e91 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 8.3E-14 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_02785 20ae4cf43e13867505db9733c1121e91 167 SUPERFAMILY SSF46785 10 159 2.24E-38 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_02785 20ae4cf43e13867505db9733c1121e91 167 Pfam PF12802 MarR family 48 109 1.0E-14 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_02785 20ae4cf43e13867505db9733c1121e91 167 SMART SM00347 42 145 1.1E-29 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_02785 20ae4cf43e13867505db9733c1121e91 167 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 31-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DY252_02785 20ae4cf43e13867505db9733c1121e91 167 Gene3D G3DSA:1.10.10.10 1 159 2.5E-42 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_14365 ce5d3d55b77d0bb9d6d42d6dddec61db 366 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 322 1.7E-49 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_14365 ce5d3d55b77d0bb9d6d42d6dddec61db 366 Gene3D G3DSA:3.40.190.10 154 324 3.2E-116 T 31-10-2018 DY252_14365 ce5d3d55b77d0bb9d6d42d6dddec61db 366 PIRSF PIRSF039026 1 359 1.0E-121 T 31-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like DY252_14365 ce5d3d55b77d0bb9d6d42d6dddec61db 366 SUPERFAMILY SSF53850 140 268 2.44E-6 T 31-10-2018 DY252_14365 ce5d3d55b77d0bb9d6d42d6dddec61db 366 Gene3D G3DSA:3.40.190.170 34 338 3.2E-116 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_14135 d5d0750e28d7160725c31cbcdcaec161 335 SUPERFAMILY SSF46689 231 282 4.48E-6 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_14135 d5d0750e28d7160725c31cbcdcaec161 335 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 285 327 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_14135 d5d0750e28d7160725c31cbcdcaec161 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 315 5.1E-5 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_14135 d5d0750e28d7160725c31cbcdcaec161 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 315 331 5.1E-5 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_14135 d5d0750e28d7160725c31cbcdcaec161 335 Gene3D G3DSA:1.10.10.60 228 335 5.9E-25 T 31-10-2018 DY252_14135 d5d0750e28d7160725c31cbcdcaec161 335 SMART SM00342 248 331 4.8E-24 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_14135 d5d0750e28d7160725c31cbcdcaec161 335 SUPERFAMILY SSF46689 284 333 9.86E-11 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_14135 d5d0750e28d7160725c31cbcdcaec161 335 Pfam PF12852 Cupin 26 217 3.3E-33 T 31-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain DY252_14135 d5d0750e28d7160725c31cbcdcaec161 335 Pfam PF12833 Helix-turn-helix domain 254 332 5.1E-18 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_20275 8ddabb4f552812fe1affe5fb7116405b 201 Gene3D G3DSA:3.40.30.10 6 80 5.9E-60 T 31-10-2018 DY252_20275 8ddabb4f552812fe1affe5fb7116405b 201 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 78 7.2E-15 T 31-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DY252_20275 8ddabb4f552812fe1affe5fb7116405b 201 SUPERFAMILY SSF52833 1 86 8.7E-15 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_20275 8ddabb4f552812fe1affe5fb7116405b 201 Gene3D G3DSA:1.20.1050.10 81 190 5.9E-60 T 31-10-2018 DY252_20275 8ddabb4f552812fe1affe5fb7116405b 201 SUPERFAMILY SSF47616 71 196 6.17E-12 T 31-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 SUPERFAMILY SSF52172 753 868 6.26E-30 T 31-10-2018 IPR011006 CheY-like superfamily DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 SUPERFAMILY SSF55785 257 333 4.36E-7 T 31-10-2018 IPR035965 PAS domain superfamily DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 Gene3D G3DSA:1.10.287.130 487 560 1.8E-21 T 31-10-2018 DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 SMART SM00091 367 433 3.4E-6 T 31-10-2018 IPR000014 PAS domain DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 SMART SM00091 256 325 0.0031 T 31-10-2018 IPR000014 PAS domain DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 Gene3D G3DSA:3.30.450.20 356 486 3.9E-14 T 31-10-2018 DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 603 724 8.7E-24 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 Pfam PF13426 PAS domain 266 307 0.039 T 31-10-2018 IPR000014 PAS domain DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 Gene3D G3DSA:3.30.565.10 563 735 1.1E-47 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 Gene3D G3DSA:3.40.50.2300 744 868 5.4E-30 T 31-10-2018 DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 Pfam PF08448 PAS fold 373 481 2.4E-7 T 31-10-2018 IPR013656 PAS fold-4 DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 SMART SM00388 495 561 1.8E-9 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 364 486 5.5E-14 T 31-10-2018 IPR000014 PAS domain DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 SMART SM00387 602 726 7.8E-31 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 Pfam PF00512 His Kinase A (phospho-acceptor) domain 496 559 2.0E-8 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 SMART SM00448 751 864 1.9E-25 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 SUPERFAMILY SSF55785 357 476 1.92E-13 T 31-10-2018 IPR035965 PAS domain superfamily DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 SUPERFAMILY SSF47384 489 558 3.92E-11 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 Pfam PF00072 Response regulator receiver domain 753 864 2.7E-23 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 SUPERFAMILY SSF55874 551 728 1.03E-39 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 PRINTS PR00344 Bacterial sensor protein C-terminal signature 686 704 5.5E-20 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 PRINTS PR00344 Bacterial sensor protein C-terminal signature 673 683 5.5E-20 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 669 5.5E-20 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_17425 a93d32a87dadc59ebebab9fed2aae4b6 868 PRINTS PR00344 Bacterial sensor protein C-terminal signature 710 723 5.5E-20 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_21510 3ad0d343f946f773bb4fde2c54758cd6 196 SUPERFAMILY SSF55620 6 195 1.7E-76 T 31-10-2018 DY252_21510 3ad0d343f946f773bb4fde2c54758cd6 196 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 12 195 39.268 T 31-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DY252_21510 3ad0d343f946f773bb4fde2c54758cd6 196 Gene3D G3DSA:1.10.286.10 2 60 1.5E-20 T 31-10-2018 DY252_21510 3ad0d343f946f773bb4fde2c54758cd6 196 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 17 195 4.0E-66 T 31-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DY252_21510 3ad0d343f946f773bb4fde2c54758cd6 196 Gene3D G3DSA:3.30.1130.10 64 196 8.9E-55 T 31-10-2018 DY252_21510 3ad0d343f946f773bb4fde2c54758cd6 196 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 122 132 - T 31-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DY252_21510 3ad0d343f946f773bb4fde2c54758cd6 196 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 74 90 - T 31-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DY252_21510 3ad0d343f946f773bb4fde2c54758cd6 196 Pfam PF01227 GTP cyclohydrolase I 17 194 6.6E-75 T 31-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DY252_07985 fc857244673ebb6073f0b8e7d1705446 239 Gene3D G3DSA:3.50.30.100 4 206 6.2E-50 T 31-10-2018 DY252_07985 fc857244673ebb6073f0b8e7d1705446 239 SUPERFAMILY SSF89562 15 195 1.96E-40 T 31-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily DY252_07985 fc857244673ebb6073f0b8e7d1705446 239 Pfam PF03737 Aldolase/RraA 19 184 1.5E-31 T 31-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DY252_02615 fda54cd07280e5703a83c90afcbf9ac9 112 PIRSF PIRSF039144 1 112 2.5E-54 T 31-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DY252_02615 fda54cd07280e5703a83c90afcbf9ac9 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 31-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 DY252_02615 fda54cd07280e5703a83c90afcbf9ac9 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.0E-43 T 31-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DY252_02615 fda54cd07280e5703a83c90afcbf9ac9 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 31-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 DY252_02615 fda54cd07280e5703a83c90afcbf9ac9 112 SUPERFAMILY SSF54913 1 112 2.73E-45 T 31-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DY252_02615 fda54cd07280e5703a83c90afcbf9ac9 112 PRINTS PR00340 P-II protein signature 23 41 8.6E-43 T 31-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DY252_02615 fda54cd07280e5703a83c90afcbf9ac9 112 PRINTS PR00340 P-II protein signature 52 75 8.6E-43 T 31-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DY252_02615 fda54cd07280e5703a83c90afcbf9ac9 112 PRINTS PR00340 P-II protein signature 83 103 8.6E-43 T 31-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DY252_02615 fda54cd07280e5703a83c90afcbf9ac9 112 PRINTS PR00340 P-II protein signature 2 17 8.6E-43 T 31-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DY252_02615 fda54cd07280e5703a83c90afcbf9ac9 112 Gene3D G3DSA:3.30.70.120 1 112 1.7E-46 T 31-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DY252_02615 fda54cd07280e5703a83c90afcbf9ac9 112 SMART SM00938 4 105 2.9E-65 T 31-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DY252_17055 f4cfcfaad92983a248e7ff3f4c456322 194 Gene3D G3DSA:1.10.10.10 1 88 2.0E-20 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_17055 f4cfcfaad92983a248e7ff3f4c456322 194 Pfam PF03551 Transcriptional regulator PadR-like family 9 80 2.1E-13 T 31-10-2018 IPR005149 Transcription regulator PadR, N-terminal DY252_17055 f4cfcfaad92983a248e7ff3f4c456322 194 SUPERFAMILY SSF46785 3 134 1.63E-27 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_00885 6038c4778ac65b30b041783bb2242534 318 SUPERFAMILY SSF51735 1 313 2.46E-86 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_00885 6038c4778ac65b30b041783bb2242534 318 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 303 2.0E-50 T 31-10-2018 IPR016040 NAD(P)-binding domain DY252_00885 6038c4778ac65b30b041783bb2242534 318 Gene3D G3DSA:3.40.50.720 6 297 3.5E-102 T 31-10-2018 DY252_00885 6038c4778ac65b30b041783bb2242534 318 Gene3D G3DSA:3.90.25.10 186 310 3.5E-102 T 31-10-2018 DY252_17440 1b87791d86a91c70e7e2d966713f423e 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 20 41 1.5E-19 T 31-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DY252_17440 1b87791d86a91c70e7e2d966713f423e 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 1.5E-19 T 31-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DY252_17440 1b87791d86a91c70e7e2d966713f423e 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.5E-19 T 31-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DY252_17440 1b87791d86a91c70e7e2d966713f423e 254 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.5E-19 T 31-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DY252_17440 1b87791d86a91c70e7e2d966713f423e 254 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 251 2.8E-52 T 31-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 DY252_17440 1b87791d86a91c70e7e2d966713f423e 254 Pfam PF01311 Bacterial export proteins, family 1 12 245 1.1E-56 T 31-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DY252_10090 5cff9e13537ecab92ac58b167d5aef7c 312 SUPERFAMILY SSF74653 215 307 6.08E-6 T 31-10-2018 DY252_10090 5cff9e13537ecab92ac58b167d5aef7c 312 Gene3D G3DSA:3.30.1150.10 178 310 2.0E-21 T 31-10-2018 DY252_04265 730ffb9c2500a55b054fe444be4a8dd2 451 Pfam PF02347 Glycine cleavage system P-protein 1 445 5.3E-119 T 31-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DY252_04265 730ffb9c2500a55b054fe444be4a8dd2 451 SUPERFAMILY SSF53383 1 450 5.23E-111 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_04265 730ffb9c2500a55b054fe444be4a8dd2 451 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 1 449 44.51 T 31-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 DY252_04265 730ffb9c2500a55b054fe444be4a8dd2 451 Gene3D G3DSA:3.90.1150.10 71 446 4.6E-155 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_04265 730ffb9c2500a55b054fe444be4a8dd2 451 PIRSF PIRSF006815 1 450 7.4E-172 T 31-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 DY252_04265 730ffb9c2500a55b054fe444be4a8dd2 451 Gene3D G3DSA:3.40.640.10 82 349 4.6E-155 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_13775 f7c777a2dbd0ea8e6238dad1086f4fb0 83 Pfam PF02597 ThiS family 4 83 2.9E-13 T 31-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 DY252_13775 f7c777a2dbd0ea8e6238dad1086f4fb0 83 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 1 83 6.0E-23 T 31-10-2018 DY252_13775 f7c777a2dbd0ea8e6238dad1086f4fb0 83 SUPERFAMILY SSF54285 1 83 6.54E-17 T 31-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DY252_13775 f7c777a2dbd0ea8e6238dad1086f4fb0 83 Gene3D G3DSA:3.10.20.30 1 83 2.2E-18 T 31-10-2018 IPR012675 Beta-grasp domain superfamily DY252_17475 a93aaf23c154e6b1f0b645b242d06207 111 Pfam PF05400 Flagellar protein FliT 29 104 1.2E-6 T 31-10-2018 IPR008622 Flagellar protein FliT DY252_18440 2524142197359cc4a9d5c6e761898f99 451 SUPERFAMILY SSF111369 85 142 4.32E-7 T 31-10-2018 DY252_18440 2524142197359cc4a9d5c6e761898f99 451 Gene3D G3DSA:2.40.30.170 65 75 9.6E-9 T 31-10-2018 DY252_18440 2524142197359cc4a9d5c6e761898f99 451 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 172 302 0.005 T 31-10-2018 DY252_18440 2524142197359cc4a9d5c6e761898f99 451 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 38 451 5.4E-116 T 31-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 DY252_18440 2524142197359cc4a9d5c6e761898f99 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 415 430 1.2E-47 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_18440 2524142197359cc4a9d5c6e761898f99 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 47 70 1.2E-47 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_18440 2524142197359cc4a9d5c6e761898f99 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 315 336 1.2E-47 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_18440 2524142197359cc4a9d5c6e761898f99 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 372 395 1.2E-47 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_18440 2524142197359cc4a9d5c6e761898f99 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 89 109 1.2E-47 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_18440 2524142197359cc4a9d5c6e761898f99 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 348 372 1.2E-47 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_18440 2524142197359cc4a9d5c6e761898f99 451 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 430 450 1.2E-47 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_18440 2524142197359cc4a9d5c6e761898f99 451 Gene3D G3DSA:1.10.287.470 111 195 9.6E-9 T 31-10-2018 DY252_18440 2524142197359cc4a9d5c6e761898f99 451 Pfam PF13533 Biotin-lipoyl like 86 123 9.1E-7 T 31-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DY252_18440 2524142197359cc4a9d5c6e761898f99 451 Gene3D G3DSA:2.40.50.100 76 110 9.6E-9 T 31-10-2018 DY252_18440 2524142197359cc4a9d5c6e761898f99 451 Gene3D G3DSA:2.40.30.170 320 433 3.2E-12 T 31-10-2018 DY252_18440 2524142197359cc4a9d5c6e761898f99 451 Pfam PF13437 HlyD family secretion protein 303 404 4.7E-11 T 31-10-2018 DY252_18560 9cbcee5f8dbc34a16351e342780f8127 763 SUPERFAMILY SSF53659 432 755 4.32E-87 T 31-10-2018 DY252_18560 9cbcee5f8dbc34a16351e342780f8127 763 Pfam PF03949 Malic enzyme, NAD binding domain 168 360 1.6E-18 T 31-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DY252_18560 9cbcee5f8dbc34a16351e342780f8127 763 Pfam PF00390 Malic enzyme, N-terminal domain 117 154 7.4E-5 T 31-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DY252_18560 9cbcee5f8dbc34a16351e342780f8127 763 Pfam PF00390 Malic enzyme, N-terminal domain 23 116 2.4E-18 T 31-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DY252_18560 9cbcee5f8dbc34a16351e342780f8127 763 Gene3D G3DSA:3.40.50.10750 575 728 1.2E-87 T 31-10-2018 DY252_18560 9cbcee5f8dbc34a16351e342780f8127 763 SMART SM00919 166 403 7.8E-134 T 31-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DY252_18560 9cbcee5f8dbc34a16351e342780f8127 763 Gene3D G3DSA:3.40.50.10950 448 752 1.2E-87 T 31-10-2018 DY252_18560 9cbcee5f8dbc34a16351e342780f8127 763 SMART SM01274 21 154 1.1E-73 T 31-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DY252_18560 9cbcee5f8dbc34a16351e342780f8127 763 SUPERFAMILY SSF53223 13 164 7.91E-50 T 31-10-2018 DY252_18560 9cbcee5f8dbc34a16351e342780f8127 763 Gene3D G3DSA:3.40.50.720 164 447 1.6E-77 T 31-10-2018 DY252_18560 9cbcee5f8dbc34a16351e342780f8127 763 Pfam PF01515 Phosphate acetyl/butaryl transferase 432 752 2.0E-90 T 31-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DY252_18560 9cbcee5f8dbc34a16351e342780f8127 763 Gene3D G3DSA:3.40.50.10380 2 163 9.7E-66 T 31-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 DY252_18560 9cbcee5f8dbc34a16351e342780f8127 763 SUPERFAMILY SSF51735 166 454 3.48E-83 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_18560 9cbcee5f8dbc34a16351e342780f8127 763 PIRSF PIRSF036684 1 760 0.0 T 31-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 DY252_15050 972d225fe69e2a92e6d3f484239b5399 349 PIRSF PIRSF000188 1 349 5.7E-146 T 31-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 DY252_15050 972d225fe69e2a92e6d3f484239b5399 349 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 20 131 5.1E-28 T 31-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DY252_15050 972d225fe69e2a92e6d3f484239b5399 349 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 178 198 2.9E-15 T 31-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DY252_15050 972d225fe69e2a92e6d3f484239b5399 349 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 2.9E-15 T 31-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DY252_15050 972d225fe69e2a92e6d3f484239b5399 349 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 288 299 2.9E-15 T 31-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DY252_15050 972d225fe69e2a92e6d3f484239b5399 349 Gene3D G3DSA:3.40.50.10860 11 345 2.8E-141 T 31-10-2018 DY252_15050 972d225fe69e2a92e6d3f484239b5399 349 SMART SM00839 146 349 3.8E-71 T 31-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DY252_15050 972d225fe69e2a92e6d3f484239b5399 349 SUPERFAMILY SSF53223 5 137 1.41E-44 T 31-10-2018 DY252_15050 972d225fe69e2a92e6d3f484239b5399 349 Gene3D G3DSA:3.40.50.720 134 338 2.8E-141 T 31-10-2018 DY252_15050 972d225fe69e2a92e6d3f484239b5399 349 SUPERFAMILY SSF51735 146 344 7.74E-51 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_15050 972d225fe69e2a92e6d3f484239b5399 349 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 31-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DY252_15050 972d225fe69e2a92e6d3f484239b5399 349 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 219 294 1.5E-9 T 31-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DY252_09690 7f49395da24377beeb5d3b51e6687f72 158 PIRSF PIRSF002721 1 158 1.2E-47 T 31-10-2018 IPR016364 Surface antigen, Rickettsia type DY252_09690 7f49395da24377beeb5d3b51e6687f72 158 Pfam PF05433 Glycine zipper 2TM domain 29 70 2.5E-8 T 31-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 DY252_09690 7f49395da24377beeb5d3b51e6687f72 158 Pfam PF16998 17 kDa outer membrane surface antigen 75 157 5.8E-10 T 31-10-2018 IPR032635 Surface antigen domain DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 44 193 1.7E-22 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 Pfam PF00204 DNA gyrase B 241 410 7.0E-61 T 31-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 17 818 4.4E-299 T 31-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 SMART SM00433 47 811 9.5E-266 T 31-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 SMART SM00387 43 194 4.2E-28 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 Gene3D G3DSA:3.30.565.10 13 240 9.2E-89 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 14 818 101.129 T 31-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 SUPERFAMILY SSF54211 241 411 8.54E-60 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 ProSitePatterns PS00177 DNA topoisomerase II signature. 442 450 - T 31-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 Pfam PF01751 Toprim domain 439 550 6.6E-19 T 31-10-2018 IPR006171 TOPRIM domain DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 Gene3D G3DSA:3.40.50.670 418 589 5.7E-74 T 31-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 SUPERFAMILY SSF56719 414 809 2.14E-85 T 31-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 746 807 2.8E-28 T 31-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 SUPERFAMILY SSF55874 17 230 1.57E-69 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR00418 DNA topoisomerase II family signature 507 523 3.0E-70 T 31-10-2018 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR00418 DNA topoisomerase II family signature 440 454 3.0E-70 T 31-10-2018 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR00418 DNA topoisomerase II family signature 82 95 3.0E-70 T 31-10-2018 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR00418 DNA topoisomerase II family signature 125 139 3.0E-70 T 31-10-2018 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR00418 DNA topoisomerase II family signature 545 557 3.0E-70 T 31-10-2018 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR00418 DNA topoisomerase II family signature 47 62 3.0E-70 T 31-10-2018 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR00418 DNA topoisomerase II family signature 288 301 3.0E-70 T 31-10-2018 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR00418 DNA topoisomerase II family signature 525 542 3.0E-70 T 31-10-2018 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR00418 DNA topoisomerase II family signature 750 766 3.0E-70 T 31-10-2018 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 Gene3D G3DSA:3.40.50.670 717 817 1.7E-22 T 31-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 Gene3D G3DSA:3.30.230.10 241 412 4.4E-72 T 31-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR01159 DNA gyrase subunit B signature 380 394 1.5E-67 T 31-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR01159 DNA gyrase subunit B signature 332 348 1.5E-67 T 31-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR01159 DNA gyrase subunit B signature 17 27 1.5E-67 T 31-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR01159 DNA gyrase subunit B signature 199 214 1.5E-67 T 31-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR01159 DNA gyrase subunit B signature 262 280 1.5E-67 T 31-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR01159 DNA gyrase subunit B signature 490 499 1.5E-67 T 31-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR01159 DNA gyrase subunit B signature 394 414 1.5E-67 T 31-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR01159 DNA gyrase subunit B signature 787 803 1.5E-67 T 31-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR01159 DNA gyrase subunit B signature 771 783 1.5E-67 T 31-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_00580 1552a30974c06cb1a29b5f1eef0e4701 818 PRINTS PR01159 DNA gyrase subunit B signature 214 227 1.5E-67 T 31-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DY252_06920 6f4a6e24070d6a43a005c5a510beb7db 164 Pfam PF00583 Acetyltransferase (GNAT) family 49 141 1.8E-15 T 31-10-2018 IPR000182 GNAT domain DY252_06920 6f4a6e24070d6a43a005c5a510beb7db 164 Gene3D G3DSA:3.40.630.30 1 161 2.4E-42 T 31-10-2018 DY252_06920 6f4a6e24070d6a43a005c5a510beb7db 164 SUPERFAMILY SSF55729 7 154 8.58E-32 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_19115 122de0fd091e5367b6bbe01b554d1d62 558 TIGRFAM TIGR01228 hutU: urocanate hydratase 12 553 1.4E-289 T 31-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DY252_19115 122de0fd091e5367b6bbe01b554d1d62 558 Pfam PF17391 Urocanase N-terminal domain 15 138 8.9E-60 T 31-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DY252_19115 122de0fd091e5367b6bbe01b554d1d62 558 Gene3D G3DSA:3.40.50.10730 142 349 2.3E-260 T 31-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DY252_19115 122de0fd091e5367b6bbe01b554d1d62 558 Pfam PF01175 Urocanase Rossmann-like domain 141 349 1.8E-86 T 31-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DY252_19115 122de0fd091e5367b6bbe01b554d1d62 558 ProSitePatterns PS01233 Urocanase signature. 442 457 - T 31-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DY252_19115 122de0fd091e5367b6bbe01b554d1d62 558 SUPERFAMILY SSF111326 7 554 1.31E-261 T 31-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DY252_19115 122de0fd091e5367b6bbe01b554d1d62 558 Pfam PF17392 Urocanase C-terminal domain 352 546 7.6E-92 T 31-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DY252_19115 122de0fd091e5367b6bbe01b554d1d62 558 PIRSF PIRSF001423 2 557 3.0E-292 T 31-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DY252_19115 122de0fd091e5367b6bbe01b554d1d62 558 Gene3D G3DSA:3.40.1770.10 17 542 2.3E-260 T 31-10-2018 DY252_19115 122de0fd091e5367b6bbe01b554d1d62 558 Hamap MF_00577 Urocanate hydratase [hutU]. 3 556 49.956 T 31-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DY252_12920 abcc8b61f49666aaf88f7981c709c211 284 SMART SM00382 31 240 3.9E-9 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_12920 abcc8b61f49666aaf88f7981c709c211 284 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 240 262 2.4E-10 T 31-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DY252_12920 abcc8b61f49666aaf88f7981c709c211 284 Gene3D G3DSA:3.40.50.300 1 268 1.9E-58 T 31-10-2018 DY252_12920 abcc8b61f49666aaf88f7981c709c211 284 Pfam PF00005 ABC transporter 23 190 1.8E-26 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_12920 abcc8b61f49666aaf88f7981c709c211 284 SUPERFAMILY SSF52540 6 263 1.6E-57 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_21920 e05a30b772b37e56128b93cb4f7047f9 424 Gene3D G3DSA:1.20.1250.20 8 410 5.6E-39 T 31-10-2018 DY252_21920 e05a30b772b37e56128b93cb4f7047f9 424 Pfam PF07690 Major Facilitator Superfamily 22 254 1.5E-21 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_21920 e05a30b772b37e56128b93cb4f7047f9 424 PRINTS PR01035 Tetracycline resistance protein signature 50 69 8.3E-5 T 31-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DY252_21920 e05a30b772b37e56128b93cb4f7047f9 424 PRINTS PR01035 Tetracycline resistance protein signature 357 380 8.3E-5 T 31-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DY252_21920 e05a30b772b37e56128b93cb4f7047f9 424 PRINTS PR01035 Tetracycline resistance protein signature 235 252 8.3E-5 T 31-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DY252_21920 e05a30b772b37e56128b93cb4f7047f9 424 PRINTS PR01035 Tetracycline resistance protein signature 81 105 8.3E-5 T 31-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DY252_21920 e05a30b772b37e56128b93cb4f7047f9 424 SUPERFAMILY SSF103473 12 408 2.49E-47 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_13190 0c6d0482a1c621e3fe85d6bbf2aa2eec 484 Pfam PF02780 Transketolase, C-terminal domain 352 474 6.1E-45 T 31-10-2018 IPR033248 Transketolase, C-terminal domain DY252_13190 0c6d0482a1c621e3fe85d6bbf2aa2eec 484 Gene3D G3DSA:2.40.50.100 2 103 8.2E-33 T 31-10-2018 DY252_13190 0c6d0482a1c621e3fe85d6bbf2aa2eec 484 Pfam PF00364 Biotin-requiring enzyme 4 77 9.4E-20 T 31-10-2018 IPR000089 Biotin/lipoyl attachment DY252_13190 0c6d0482a1c621e3fe85d6bbf2aa2eec 484 SUPERFAMILY SSF51230 1 96 3.27E-29 T 31-10-2018 IPR011053 Single hybrid motif DY252_13190 0c6d0482a1c621e3fe85d6bbf2aa2eec 484 Pfam PF02779 Transketolase, pyrimidine binding domain 162 336 3.4E-48 T 31-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DY252_13190 0c6d0482a1c621e3fe85d6bbf2aa2eec 484 Gene3D G3DSA:3.40.50.920 349 483 1.4E-50 T 31-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DY252_13190 0c6d0482a1c621e3fe85d6bbf2aa2eec 484 SUPERFAMILY SSF52922 346 481 3.8E-45 T 31-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DY252_13190 0c6d0482a1c621e3fe85d6bbf2aa2eec 484 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 31-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DY252_13190 0c6d0482a1c621e3fe85d6bbf2aa2eec 484 Gene3D G3DSA:3.40.50.970 162 348 1.5E-85 T 31-10-2018 DY252_13190 0c6d0482a1c621e3fe85d6bbf2aa2eec 484 SMART SM00861 162 337 1.0E-59 T 31-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DY252_13190 0c6d0482a1c621e3fe85d6bbf2aa2eec 484 SUPERFAMILY SSF52518 161 351 1.07E-68 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_19905 bbced7883c1eb333ca24f3129358868e 290 Gene3D G3DSA:1.10.760.10 174 263 5.7E-69 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_19905 bbced7883c1eb333ca24f3129358868e 290 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 8 290 8.7E-107 T 31-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III DY252_19905 bbced7883c1eb333ca24f3129358868e 290 SUPERFAMILY SSF46626 31 198 1.48E-24 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_19905 bbced7883c1eb333ca24f3129358868e 290 PRINTS PR00605 Class IC cytochrome C signature 120 131 3.1E-8 T 31-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 DY252_19905 bbced7883c1eb333ca24f3129358868e 290 PRINTS PR00605 Class IC cytochrome C signature 261 283 3.1E-8 T 31-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 DY252_19905 bbced7883c1eb333ca24f3129358868e 290 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 206 283 5.2E-13 T 31-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_19905 bbced7883c1eb333ca24f3129358868e 290 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 111 195 4.8E-10 T 31-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_19905 bbced7883c1eb333ca24f3129358868e 290 Gene3D G3DSA:1.20.58.1490 1 69 2.0E-20 T 31-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily DY252_19905 bbced7883c1eb333ca24f3129358868e 290 SUPERFAMILY SSF46626 202 289 8.05E-26 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_19905 bbced7883c1eb333ca24f3129358868e 290 Gene3D G3DSA:1.10.760.10 83 286 5.7E-69 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_19905 bbced7883c1eb333ca24f3129358868e 290 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 13 57 4.4E-23 T 31-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal DY252_19905 bbced7883c1eb333ca24f3129358868e 290 PIRSF PIRSF000006 1 290 1.1E-107 T 31-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III DY252_20360 799505d6dad6426310f0394124e750ce 148 SUPERFAMILY SSF52335 5 127 4.43E-43 T 31-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DY252_20360 799505d6dad6426310f0394124e750ce 148 Pfam PF02142 MGS-like domain 16 109 2.7E-13 T 31-10-2018 IPR011607 Methylglyoxal synthase-like domain DY252_20360 799505d6dad6426310f0394124e750ce 148 Gene3D G3DSA:3.40.50.1380 2 147 1.6E-51 T 31-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DY252_20360 799505d6dad6426310f0394124e750ce 148 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 3 123 28.569 T 31-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DY252_20360 799505d6dad6426310f0394124e750ce 148 PIRSF PIRSF006614 1 143 2.2E-53 T 31-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DY252_20360 799505d6dad6426310f0394124e750ce 148 SMART SM00851 16 110 3.6E-11 T 31-10-2018 IPR011607 Methylglyoxal synthase-like domain DY252_20360 799505d6dad6426310f0394124e750ce 148 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 5 130 1.8E-45 T 31-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DY252_10240 51e540a8bf24be9c9485c37e1079d528 399 Pfam PF00990 Diguanylate cyclase, GGDEF domain 213 363 2.4E-32 T 31-10-2018 IPR000160 GGDEF domain DY252_10240 51e540a8bf24be9c9485c37e1079d528 399 SMART SM00267 199 382 2.1E-30 T 31-10-2018 IPR000160 GGDEF domain DY252_10240 51e540a8bf24be9c9485c37e1079d528 399 Gene3D G3DSA:3.30.70.270 208 371 7.1E-37 T 31-10-2018 DY252_10240 51e540a8bf24be9c9485c37e1079d528 399 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 212 363 2.2E-34 T 31-10-2018 IPR000160 GGDEF domain DY252_10240 51e540a8bf24be9c9485c37e1079d528 399 SUPERFAMILY SSF55073 217 363 4.79E-32 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_18685 c37ab690737484f8614713fb32e3a214 466 Gene3D G3DSA:3.40.640.10 71 350 2.3E-161 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_18685 c37ab690737484f8614713fb32e3a214 466 PIRSF PIRSF000521 39 458 1.1E-33 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_18685 c37ab690737484f8614713fb32e3a214 466 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 260 297 - T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_18685 c37ab690737484f8614713fb32e3a214 466 Pfam PF00202 Aminotransferase class-III 37 455 2.2E-84 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_18685 c37ab690737484f8614713fb32e3a214 466 SUPERFAMILY SSF53383 10 457 1.71E-115 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_18685 c37ab690737484f8614713fb32e3a214 466 Gene3D G3DSA:3.90.1150.10 15 456 2.3E-161 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_05530 cb7a37426b9b7d648007448bcd687ddf 157 Gene3D G3DSA:1.10.287.180 1 75 7.8E-32 T 31-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DY252_05530 cb7a37426b9b7d648007448bcd687ddf 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 3.9E-62 T 31-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 DY252_05530 cb7a37426b9b7d648007448bcd687ddf 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 31-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DY252_05530 cb7a37426b9b7d648007448bcd687ddf 157 PIRSF PIRSF006092 1 157 4.2E-56 T 31-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 DY252_05530 cb7a37426b9b7d648007448bcd687ddf 157 SUPERFAMILY SSF46557 3 77 1.44E-28 T 31-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DY252_05530 cb7a37426b9b7d648007448bcd687ddf 157 Gene3D G3DSA:3.10.50.30 76 156 3.4E-29 T 31-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 DY252_05530 cb7a37426b9b7d648007448bcd687ddf 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 31-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DY252_05530 cb7a37426b9b7d648007448bcd687ddf 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 7.4E-32 T 31-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 DY252_05530 cb7a37426b9b7d648007448bcd687ddf 157 SUPERFAMILY SSF54534 81 155 3.76E-25 T 31-10-2018 DY252_05530 cb7a37426b9b7d648007448bcd687ddf 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 155 2.6E-30 T 31-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DY252_05530 cb7a37426b9b7d648007448bcd687ddf 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 33.328 T 31-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 DY252_05210 f8806b96218d4cc094dcf5553ab2d5c4 294 TIGRFAM TIGR03418 chol_sulf_TF: putative choline sulfate-utilization transcription factor 5 293 1.2E-100 T 31-10-2018 IPR017786 Transcription factor, choline sulphate-utilisation, putative DY252_05210 f8806b96218d4cc094dcf5553ab2d5c4 294 Gene3D G3DSA:1.10.10.10 5 95 1.2E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_05210 f8806b96218d4cc094dcf5553ab2d5c4 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 6.4E-22 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_05210 f8806b96218d4cc094dcf5553ab2d5c4 294 SUPERFAMILY SSF46785 5 112 6.81E-24 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_05210 f8806b96218d4cc094dcf5553ab2d5c4 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.9E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_05210 f8806b96218d4cc094dcf5553ab2d5c4 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.9E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_05210 f8806b96218d4cc094dcf5553ab2d5c4 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.9E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_05210 f8806b96218d4cc094dcf5553ab2d5c4 294 Gene3D G3DSA:3.40.190.10 103 290 1.3E-40 T 31-10-2018 DY252_05210 f8806b96218d4cc094dcf5553ab2d5c4 294 SUPERFAMILY SSF53850 94 293 4.16E-30 T 31-10-2018 DY252_05210 f8806b96218d4cc094dcf5553ab2d5c4 294 Pfam PF03466 LysR substrate binding domain 92 291 2.6E-25 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_05210 f8806b96218d4cc094dcf5553ab2d5c4 294 Gene3D G3DSA:3.40.190.10 162 265 1.3E-40 T 31-10-2018 DY252_10085 c491b648964629e31270e41ea462b8f3 127 Gene3D G3DSA:3.30.420.270 49 118 3.8E-27 T 31-10-2018 DY252_10085 c491b648964629e31270e41ea462b8f3 127 Pfam PF02472 Biopolymer transport protein ExbD/TolR 2 121 8.9E-28 T 31-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DY252_10085 c491b648964629e31270e41ea462b8f3 127 TIGRFAM TIGR02801 tolR: protein TolR 1 121 7.2E-42 T 31-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 DY252_20420 7482b11d96c3344ba92a83fe040169ee 234 Gene3D G3DSA:1.10.10.1320 1 116 1.7E-27 T 31-10-2018 DY252_20420 7482b11d96c3344ba92a83fe040169ee 234 Pfam PF12973 ChrR Cupin-like domain 127 214 3.6E-14 T 31-10-2018 IPR025979 ChrR-like cupin domain DY252_20420 7482b11d96c3344ba92a83fe040169ee 234 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 5 234 4.6E-63 T 31-10-2018 IPR012807 Anti-sigma factor ChrR, putative DY252_20420 7482b11d96c3344ba92a83fe040169ee 234 SUPERFAMILY SSF51182 113 230 1.27E-19 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_20420 7482b11d96c3344ba92a83fe040169ee 234 Gene3D G3DSA:2.60.120.10 122 216 1.6E-26 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_16960 d2950f7956936fd4bdc9faea9231c2a4 122 SUPERFAMILY SSF142906 1 118 4.97E-30 T 31-10-2018 IPR038056 YjbR-like superfamily DY252_16960 d2950f7956936fd4bdc9faea9231c2a4 122 Pfam PF04237 YjbR 12 102 3.4E-13 T 31-10-2018 IPR007351 Uncharacterised protein YjbR DY252_16960 d2950f7956936fd4bdc9faea9231c2a4 122 Gene3D G3DSA:3.90.1150.30 1 121 3.7E-10 T 31-10-2018 IPR038056 YjbR-like superfamily DY252_17880 8380ca6d2e6cb4356fa8e4aa3dd57c4b 231 Gene3D G3DSA:3.40.30.10 1 217 1.1E-68 T 31-10-2018 DY252_17880 8380ca6d2e6cb4356fa8e4aa3dd57c4b 231 SUPERFAMILY SSF52833 5 218 5.04E-49 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_17880 8380ca6d2e6cb4356fa8e4aa3dd57c4b 231 Pfam PF01323 DSBA-like thioredoxin domain 8 213 6.4E-40 T 31-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 DY252_21605 6f71c2004e6be6aad55fdd7767c8971f 159 Gene3D G3DSA:3.40.50.2020 8 157 1.3E-44 T 31-10-2018 DY252_21605 6f71c2004e6be6aad55fdd7767c8971f 159 SUPERFAMILY SSF53271 8 146 3.41E-33 T 31-10-2018 IPR029057 Phosphoribosyltransferase-like DY252_21605 6f71c2004e6be6aad55fdd7767c8971f 159 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 6 158 39.821 T 31-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 DY252_21605 6f71c2004e6be6aad55fdd7767c8971f 159 Pfam PF00156 Phosphoribosyl transferase domain 15 148 1.6E-16 T 31-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DY252_15135 37bf549c1506ce8c46490bf202ca1735 551 SUPERFAMILY SSF56014 120 279 1.44E-50 T 31-10-2018 DY252_15135 37bf549c1506ce8c46490bf202ca1735 551 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 412 547 1.3E-12 T 31-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DY252_15135 37bf549c1506ce8c46490bf202ca1735 551 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 273 4.5E-46 T 31-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DY252_15135 37bf549c1506ce8c46490bf202ca1735 551 Gene3D G3DSA:3.30.413.10 408 550 8.2E-32 T 31-10-2018 DY252_15135 37bf549c1506ce8c46490bf202ca1735 551 Gene3D G3DSA:3.30.413.10 119 312 2.1E-73 T 31-10-2018 DY252_15135 37bf549c1506ce8c46490bf202ca1735 551 Gene3D G3DSA:3.90.480.10 52 389 2.1E-73 T 31-10-2018 DY252_15135 37bf549c1506ce8c46490bf202ca1735 551 SUPERFAMILY SSF55124 252 421 2.78E-24 T 31-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DY252_15135 37bf549c1506ce8c46490bf202ca1735 551 SUPERFAMILY SSF55124 1 125 4.58E-27 T 31-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DY252_15135 37bf549c1506ce8c46490bf202ca1735 551 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 52 110 4.7E-13 T 31-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DY252_15135 37bf549c1506ce8c46490bf202ca1735 551 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 345 398 1.2E-14 T 31-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DY252_15135 37bf549c1506ce8c46490bf202ca1735 551 SUPERFAMILY SSF56014 408 548 2.22E-38 T 31-10-2018 DY252_05435 5ee77d50671951cdd725ff03e49f7db7 297 SUPERFAMILY SSF53850 85 271 2.85E-32 T 31-10-2018 DY252_05435 5ee77d50671951cdd725ff03e49f7db7 297 Pfam PF03466 LysR substrate binding domain 87 277 3.2E-34 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_05435 5ee77d50671951cdd725ff03e49f7db7 297 SUPERFAMILY SSF46785 2 111 2.22E-21 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_05435 5ee77d50671951cdd725ff03e49f7db7 297 Gene3D G3DSA:1.10.10.10 2 84 4.4E-20 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_05435 5ee77d50671951cdd725ff03e49f7db7 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.5E-16 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_05435 5ee77d50671951cdd725ff03e49f7db7 297 Gene3D G3DSA:3.40.190.10 91 163 4.2E-28 T 31-10-2018 DY252_05435 5ee77d50671951cdd725ff03e49f7db7 297 Gene3D G3DSA:3.40.190.10 164 263 4.2E-28 T 31-10-2018 DY252_05435 5ee77d50671951cdd725ff03e49f7db7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-7 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_05435 5ee77d50671951cdd725ff03e49f7db7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-7 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_05435 5ee77d50671951cdd725ff03e49f7db7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-7 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_19105 1852bec20b9aff13a7e2436c41f81d18 513 Gene3D G3DSA:1.10.275.10 2 196 2.7E-64 T 31-10-2018 IPR024083 Fumarase/histidase, N-terminal DY252_19105 1852bec20b9aff13a7e2436c41f81d18 513 Gene3D G3DSA:1.20.200.10 197 506 4.4E-113 T 31-10-2018 DY252_19105 1852bec20b9aff13a7e2436c41f81d18 513 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 2 504 43.768 T 31-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DY252_19105 1852bec20b9aff13a7e2436c41f81d18 513 SUPERFAMILY SSF48557 3 498 1.1E-188 T 31-10-2018 IPR008948 L-Aspartase-like GO:0003824 DY252_19105 1852bec20b9aff13a7e2436c41f81d18 513 Pfam PF00221 Aromatic amino acid lyase 11 471 3.4E-181 T 31-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 DY252_19105 1852bec20b9aff13a7e2436c41f81d18 513 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 3 503 1.4E-205 T 31-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DY252_19105 1852bec20b9aff13a7e2436c41f81d18 513 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 138 154 - T 31-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 DY252_11795 a58e50d3fca5bc00bc545296d9566aab 80 Pfam PF01037 Lrp/AsnC ligand binding domain 7 76 6.8E-14 T 31-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DY252_11795 a58e50d3fca5bc00bc545296d9566aab 80 SUPERFAMILY SSF54909 4 78 6.44E-15 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_11795 a58e50d3fca5bc00bc545296d9566aab 80 Gene3D G3DSA:3.30.70.920 1 75 2.4E-17 T 31-10-2018 DY252_13130 d2697499865fa64f84ef382828bc018e 158 SUPERFAMILY SSF74982 7 137 1.44E-48 T 31-10-2018 IPR023620 Small protein B DY252_13130 d2697499865fa64f84ef382828bc018e 158 Pfam PF01668 SmpB protein 13 155 7.7E-59 T 31-10-2018 IPR000037 SsrA-binding protein GO:0003723 DY252_13130 d2697499865fa64f84ef382828bc018e 158 ProSitePatterns PS01317 SsrA-binding protein. 31 43 - T 31-10-2018 IPR020081 SsrA-binding protein, conserved site DY252_13130 d2697499865fa64f84ef382828bc018e 158 Hamap MF_00023 SsrA-binding protein [smpB]. 1 158 67.176 T 31-10-2018 IPR000037 SsrA-binding protein GO:0003723 DY252_13130 d2697499865fa64f84ef382828bc018e 158 Gene3D G3DSA:2.40.280.10 5 134 1.1E-47 T 31-10-2018 IPR023620 Small protein B DY252_13130 d2697499865fa64f84ef382828bc018e 158 TIGRFAM TIGR00086 smpB: SsrA-binding protein 13 154 1.9E-56 T 31-10-2018 IPR000037 SsrA-binding protein GO:0003723 DY252_13130 d2697499865fa64f84ef382828bc018e 158 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 137 2.0E-41 T 31-10-2018 IPR000037 SsrA-binding protein GO:0003723 DY252_15105 7a83e612a35f03d3c43558f9da1ce6f6 309 Pfam PF00682 HMGL-like 10 282 2.0E-63 T 31-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DY252_15105 7a83e612a35f03d3c43558f9da1ce6f6 309 SUPERFAMILY SSF51569 7 288 3.22E-78 T 31-10-2018 DY252_15105 7a83e612a35f03d3c43558f9da1ce6f6 309 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 237 246 - T 31-10-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111|Reactome: R-HSA-9033241 DY252_15105 7a83e612a35f03d3c43558f9da1ce6f6 309 Gene3D G3DSA:3.20.20.70 4 304 1.4E-141 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_06485 ca9a8956d053ec731d41d89f3920ac89 469 Pfam PF08245 Mur ligase middle domain 109 298 3.2E-38 T 31-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DY252_06485 ca9a8956d053ec731d41d89f3920ac89 469 Pfam PF01225 Mur ligase family, catalytic domain 26 73 7.4E-13 T 31-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DY252_06485 ca9a8956d053ec731d41d89f3920ac89 469 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 462 1.5E-117 T 31-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_06485 ca9a8956d053ec731d41d89f3920ac89 469 SUPERFAMILY SSF53623 104 317 2.75E-44 T 31-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DY252_06485 ca9a8956d053ec731d41d89f3920ac89 469 SUPERFAMILY SSF53244 333 462 1.43E-31 T 31-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DY252_06485 ca9a8956d053ec731d41d89f3920ac89 469 Gene3D G3DSA:3.40.1190.10 85 316 4.7E-55 T 31-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DY252_06485 ca9a8956d053ec731d41d89f3920ac89 469 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 7 463 30.822 T 31-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_06485 ca9a8956d053ec731d41d89f3920ac89 469 Gene3D G3DSA:3.40.1390.10 5 81 4.6E-20 T 31-10-2018 DY252_06485 ca9a8956d053ec731d41d89f3920ac89 469 Pfam PF02875 Mur ligase family, glutamate ligase domain 334 406 5.9E-12 T 31-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DY252_06485 ca9a8956d053ec731d41d89f3920ac89 469 Gene3D G3DSA:3.90.190.20 325 466 1.7E-36 T 31-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DY252_06485 ca9a8956d053ec731d41d89f3920ac89 469 SUPERFAMILY SSF63418 20 96 8.37E-21 T 31-10-2018 IPR035911 MurE/MurF, N-terminal DY252_08430 e62684e9bccf573ce28d31b3f5533176 638 Gene3D G3DSA:3.40.710.10 238 614 3.2E-100 T 31-10-2018 DY252_08430 e62684e9bccf573ce28d31b3f5533176 638 Gene3D G3DSA:3.30.1390.30 80 155 7.0E-37 T 31-10-2018 DY252_08430 e62684e9bccf573ce28d31b3f5533176 638 SUPERFAMILY SSF56601 244 607 2.07E-97 T 31-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DY252_08430 e62684e9bccf573ce28d31b3f5533176 638 Pfam PF03717 Penicillin-binding Protein dimerisation domain 60 229 1.7E-37 T 31-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DY252_08430 e62684e9bccf573ce28d31b3f5533176 638 Pfam PF00905 Penicillin binding protein transpeptidase domain 263 602 1.8E-77 T 31-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DY252_08430 e62684e9bccf573ce28d31b3f5533176 638 SUPERFAMILY SSF56519 51 243 3.92E-41 T 31-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DY252_08430 e62684e9bccf573ce28d31b3f5533176 638 Gene3D G3DSA:3.90.1310.10 59 237 7.0E-37 T 31-10-2018 DY252_08430 e62684e9bccf573ce28d31b3f5533176 638 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 14 604 1.7E-216 T 31-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DY252_19615 1aafa4d18dc8fcbab8ae1a70b0e1ab36 167 Pfam PF00430 ATP synthase B/B' CF(0) 15 140 2.3E-27 T 31-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DY252_19615 1aafa4d18dc8fcbab8ae1a70b0e1ab36 167 Hamap MF_01398 ATP synthase subunit b [atpF]. 7 144 11.554 T 31-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DY252_12100 3c6ee791998662a9eecb9df1ef554bfd 425 Gene3D G3DSA:3.20.20.450 150 379 9.3E-6 T 31-10-2018 IPR035919 EAL domain superfamily DY252_12100 3c6ee791998662a9eecb9df1ef554bfd 425 Pfam PF00563 EAL domain 206 374 1.9E-7 T 31-10-2018 IPR001633 EAL domain DY252_12100 3c6ee791998662a9eecb9df1ef554bfd 425 SUPERFAMILY SSF141868 198 375 2.35E-7 T 31-10-2018 IPR035919 EAL domain superfamily DY252_10760 b63b7e516c123c7746849fab604e45ea 140 SUPERFAMILY SSF51735 9 139 4.04E-43 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_10760 b63b7e516c123c7746849fab604e45ea 140 SMART SM00881 15 110 8.3E-27 T 31-10-2018 IPR003781 CoA-binding GO:0048037 DY252_10760 b63b7e516c123c7746849fab604e45ea 140 Gene3D G3DSA:3.40.50.720 8 140 1.3E-42 T 31-10-2018 DY252_10760 b63b7e516c123c7746849fab604e45ea 140 Pfam PF13380 CoA binding domain 20 136 9.4E-40 T 31-10-2018 IPR003781 CoA-binding GO:0048037 DY252_02630 70274d1d22417ec40120053a29e64719 128 Gene3D G3DSA:3.30.2020.30 6 104 7.4E-28 T 31-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 DY252_02630 70274d1d22417ec40120053a29e64719 128 Pfam PF06155 Protein of unknown function (DUF971) 16 99 3.9E-26 T 31-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 DY252_09405 c0487bdf6db0cc23241d75a7990e4f53 169 Gene3D G3DSA:3.40.50.300 6 167 4.6E-22 T 31-10-2018 DY252_09405 c0487bdf6db0cc23241d75a7990e4f53 169 SUPERFAMILY SSF52540 11 157 1.74E-17 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_09405 c0487bdf6db0cc23241d75a7990e4f53 169 Pfam PF13671 AAA domain 11 153 1.0E-24 T 31-10-2018 DY252_13565 f1cb17ee8a8d2abe16318a2f8bf783ab 416 Gene3D G3DSA:3.30.9.10 134 362 2.1E-54 T 31-10-2018 DY252_13565 f1cb17ee8a8d2abe16318a2f8bf783ab 416 SUPERFAMILY SSF54373 270 360 4.58E-15 T 31-10-2018 DY252_13565 f1cb17ee8a8d2abe16318a2f8bf783ab 416 Gene3D G3DSA:3.50.50.60 102 405 2.1E-54 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_13565 f1cb17ee8a8d2abe16318a2f8bf783ab 416 SUPERFAMILY SSF51905 1 416 2.59E-52 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_13565 f1cb17ee8a8d2abe16318a2f8bf783ab 416 Gene3D G3DSA:3.50.50.60 1 77 9.2E-12 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_13565 f1cb17ee8a8d2abe16318a2f8bf783ab 416 Pfam PF01266 FAD dependent oxidoreductase 2 398 5.6E-68 T 31-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DY252_21935 54273904ad0756ec4314b7abb1ab1d83 180 SUPERFAMILY SSF55729 14 154 2.13E-28 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_21935 54273904ad0756ec4314b7abb1ab1d83 180 Pfam PF00583 Acetyltransferase (GNAT) family 47 147 6.5E-14 T 31-10-2018 IPR000182 GNAT domain DY252_21935 54273904ad0756ec4314b7abb1ab1d83 180 Gene3D G3DSA:3.40.630.30 3 158 8.0E-26 T 31-10-2018 DY252_06475 84ef3dcc577abfee998dc24eae1db962 468 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 455 8.1E-102 T 31-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DY252_06475 84ef3dcc577abfee998dc24eae1db962 468 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 457 29.776 T 31-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DY252_06475 84ef3dcc577abfee998dc24eae1db962 468 Gene3D G3DSA:3.90.190.20 323 460 2.0E-35 T 31-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DY252_06475 84ef3dcc577abfee998dc24eae1db962 468 Gene3D G3DSA:3.40.50.720 6 97 3.1E-14 T 31-10-2018 DY252_06475 84ef3dcc577abfee998dc24eae1db962 468 SUPERFAMILY SSF53244 317 457 1.1E-33 T 31-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DY252_06475 84ef3dcc577abfee998dc24eae1db962 468 Gene3D G3DSA:3.40.1190.10 98 317 3.9E-47 T 31-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DY252_06475 84ef3dcc577abfee998dc24eae1db962 468 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 113 136 - T 31-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 DY252_06475 84ef3dcc577abfee998dc24eae1db962 468 Pfam PF08245 Mur ligase middle domain 115 297 1.5E-25 T 31-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DY252_06475 84ef3dcc577abfee998dc24eae1db962 468 SUPERFAMILY SSF51984 7 97 4.71E-10 T 31-10-2018 DY252_06475 84ef3dcc577abfee998dc24eae1db962 468 SUPERFAMILY SSF53623 106 315 1.28E-44 T 31-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DY252_05830 203cbda9f40f823e955b1883496bc0b3 483 Gene3D G3DSA:3.30.420.40 2 243 3.1E-82 T 31-10-2018 DY252_05830 203cbda9f40f823e955b1883496bc0b3 483 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 253 436 2.3E-31 T 31-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DY252_05830 203cbda9f40f823e955b1883496bc0b3 483 Gene3D G3DSA:3.30.420.40 244 482 6.2E-68 T 31-10-2018 DY252_05830 203cbda9f40f823e955b1883496bc0b3 483 SUPERFAMILY SSF53067 244 479 8.01E-56 T 31-10-2018 DY252_05830 203cbda9f40f823e955b1883496bc0b3 483 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 127 139 - T 31-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DY252_05830 203cbda9f40f823e955b1883496bc0b3 483 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 242 9.1E-66 T 31-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DY252_05830 203cbda9f40f823e955b1883496bc0b3 483 TIGRFAM TIGR01312 XylB: xylulokinase 4 476 2.3E-163 T 31-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 DY252_05830 203cbda9f40f823e955b1883496bc0b3 483 SUPERFAMILY SSF53067 3 245 6.02E-71 T 31-10-2018 DY252_05830 203cbda9f40f823e955b1883496bc0b3 483 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 348 368 - T 31-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DY252_05830 203cbda9f40f823e955b1883496bc0b3 483 PIRSF PIRSF000538 1 482 2.7E-131 T 31-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DY252_12155 374ea8ec3deedeadc52764a3b287fa29 78 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 2 47 5.4E-19 T 31-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DY252_12155 374ea8ec3deedeadc52764a3b287fa29 78 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 74 20.062 T 31-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DY252_12155 374ea8ec3deedeadc52764a3b287fa29 78 Pfam PF02416 mttA/Hcf106 family 3 55 5.9E-14 T 31-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 DY252_15030 5e19b8c0bbab89c5282635465ce8602c 199 Pfam PF01323 DSBA-like thioredoxin domain 5 196 2.1E-29 T 31-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 DY252_15030 5e19b8c0bbab89c5282635465ce8602c 199 PIRSF PIRSF006386 1 199 7.2E-47 T 31-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 DY252_15030 5e19b8c0bbab89c5282635465ce8602c 199 SUPERFAMILY SSF52833 5 197 3.08E-30 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_15030 5e19b8c0bbab89c5282635465ce8602c 199 Gene3D G3DSA:3.40.30.10 5 199 4.2E-46 T 31-10-2018 DY252_20315 4cede21798b4a5210bf0149d26c2dda4 872 Gene3D G3DSA:2.30.30.60 637 686 3.3E-13 T 31-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DY252_20315 4cede21798b4a5210bf0149d26c2dda4 872 Gene3D G3DSA:3.30.70.100 689 782 2.6E-25 T 31-10-2018 DY252_20315 4cede21798b4a5210bf0149d26c2dda4 872 SUPERFAMILY SSF82861 536 620 2.22E-12 T 31-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DY252_20315 4cede21798b4a5210bf0149d26c2dda4 872 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 651 685 - T 31-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 DY252_20315 4cede21798b4a5210bf0149d26c2dda4 872 SUPERFAMILY SSF50182 622 687 4.9E-17 T 31-10-2018 IPR010920 LSM domain superfamily DY252_20315 4cede21798b4a5210bf0149d26c2dda4 872 SUPERFAMILY SSF82689 694 788 2.62E-27 T 31-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DY252_20315 4cede21798b4a5210bf0149d26c2dda4 872 Pfam PF00924 Mechanosensitive ion channel 580 778 1.2E-51 T 31-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DY252_20315 4cede21798b4a5210bf0149d26c2dda4 872 Pfam PF12607 Protein of unknown function (DUF3772) 139 189 1.1E-7 T 31-10-2018 IPR022249 Domain of unknown function DUF3772 DY252_19060 1f6e5939df50a0c8cb0d24da4214153c 499 Pfam PF00171 Aldehyde dehydrogenase family 17 479 3.4E-143 T 31-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DY252_19060 1f6e5939df50a0c8cb0d24da4214153c 499 SUPERFAMILY SSF53720 3 483 9.42E-151 T 31-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DY252_19060 1f6e5939df50a0c8cb0d24da4214153c 499 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 31-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DY252_19060 1f6e5939df50a0c8cb0d24da4214153c 499 Gene3D G3DSA:3.40.309.10 250 452 1.2E-153 T 31-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DY252_19060 1f6e5939df50a0c8cb0d24da4214153c 499 Gene3D G3DSA:3.40.605.10 24 460 1.2E-153 T 31-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_19060 1f6e5939df50a0c8cb0d24da4214153c 499 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 483 2.8E-209 T 31-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 DY252_13370 53c9d2f5b147751b1ce04775f936f3d2 307 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 31-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DY252_13370 53c9d2f5b147751b1ce04775f936f3d2 307 Gene3D G3DSA:3.30.479.20 56 147 5.9E-25 T 31-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DY252_13370 53c9d2f5b147751b1ce04775f936f3d2 307 Gene3D G3DSA:1.10.8.10 1 55 1.1E-26 T 31-10-2018 DY252_13370 53c9d2f5b147751b1ce04775f936f3d2 307 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 306 7.4E-93 T 31-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DY252_13370 53c9d2f5b147751b1ce04775f936f3d2 307 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 31-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DY252_13370 53c9d2f5b147751b1ce04775f936f3d2 307 Pfam PF00889 Elongation factor TS 70 288 4.3E-68 T 31-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 DY252_13370 53c9d2f5b147751b1ce04775f936f3d2 307 SUPERFAMILY SSF46934 1 55 3.16E-19 T 31-10-2018 IPR009060 UBA-like superfamily GO:0005515 DY252_13370 53c9d2f5b147751b1ce04775f936f3d2 307 SUPERFAMILY SSF54713 149 306 2.88E-46 T 31-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DY252_13370 53c9d2f5b147751b1ce04775f936f3d2 307 Gene3D G3DSA:3.30.479.20 149 287 4.2E-42 T 31-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DY252_13370 53c9d2f5b147751b1ce04775f936f3d2 307 Hamap MF_00050 Elongation factor Ts [tsf]. 1 305 77.04 T 31-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DY252_13370 53c9d2f5b147751b1ce04775f936f3d2 307 SUPERFAMILY SSF54713 55 142 3.66E-21 T 31-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DY252_13370 53c9d2f5b147751b1ce04775f936f3d2 307 Gene3D G3DSA:1.10.286.20 202 246 4.2E-42 T 31-10-2018 DY252_05340 05b81fdfc29f2191230516cd7a60cf52 267 Pfam PF01195 Peptidyl-tRNA hydrolase 3 166 6.8E-52 T 31-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DY252_05340 05b81fdfc29f2191230516cd7a60cf52 267 SUPERFAMILY SSF53178 1 183 3.66E-64 T 31-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 DY252_05340 05b81fdfc29f2191230516cd7a60cf52 267 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 31-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 DY252_05340 05b81fdfc29f2191230516cd7a60cf52 267 Gene3D G3DSA:3.40.50.1470 1 188 1.4E-62 T 31-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 DY252_05340 05b81fdfc29f2191230516cd7a60cf52 267 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 31-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 DY252_05340 05b81fdfc29f2191230516cd7a60cf52 267 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 156 3.5E-54 T 31-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DY252_05340 05b81fdfc29f2191230516cd7a60cf52 267 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 178 34.188 T 31-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DY252_18850 d4aed01bc928c76de35f27f645bb2cbc 351 Pfam PF13377 Periplasmic binding protein-like domain 171 334 1.6E-29 T 31-10-2018 DY252_18850 d4aed01bc928c76de35f27f645bb2cbc 351 Gene3D G3DSA:1.10.260.40 1 57 1.7E-17 T 31-10-2018 DY252_18850 d4aed01bc928c76de35f27f645bb2cbc 351 SUPERFAMILY SSF47413 2 55 1.29E-13 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_18850 d4aed01bc928c76de35f27f645bb2cbc 351 Gene3D G3DSA:3.40.50.2300 76 307 4.2E-65 T 31-10-2018 DY252_18850 d4aed01bc928c76de35f27f645bb2cbc 351 SUPERFAMILY SSF53822 60 339 6.42E-53 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_18850 d4aed01bc928c76de35f27f645bb2cbc 351 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 47 7.4E-10 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_18850 d4aed01bc928c76de35f27f645bb2cbc 351 SMART SM00354 1 70 1.4E-14 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_18850 d4aed01bc928c76de35f27f645bb2cbc 351 Gene3D G3DSA:3.40.50.2300 163 292 4.2E-65 T 31-10-2018 DY252_04380 53c5dc11d8cffc72ad5f12a913e191c1 309 PIRSF PIRSF010376 3 302 2.5E-82 T 31-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DY252_04380 53c5dc11d8cffc72ad5f12a913e191c1 309 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 5 295 31.404 T 31-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DY252_04380 53c5dc11d8cffc72ad5f12a913e191c1 309 Pfam PF00288 GHMP kinases N terminal domain 93 150 2.8E-9 T 31-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DY252_04380 53c5dc11d8cffc72ad5f12a913e191c1 309 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4 276 1.0E-58 T 31-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DY252_04380 53c5dc11d8cffc72ad5f12a913e191c1 309 SUPERFAMILY SSF55060 168 288 4.32E-24 T 31-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DY252_04380 53c5dc11d8cffc72ad5f12a913e191c1 309 SUPERFAMILY SSF54211 5 163 8.35E-40 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_04380 53c5dc11d8cffc72ad5f12a913e191c1 309 Pfam PF08544 GHMP kinases C terminal 218 283 1.2E-10 T 31-10-2018 IPR013750 GHMP kinase, C-terminal domain DY252_04380 53c5dc11d8cffc72ad5f12a913e191c1 309 Gene3D G3DSA:3.30.70.890 168 296 1.6E-26 T 31-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DY252_04380 53c5dc11d8cffc72ad5f12a913e191c1 309 Gene3D G3DSA:3.30.230.10 1 165 4.7E-52 T 31-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DY252_20080 90bb7ae15a784a4445ae0511b2991e42 350 SMART SM00354 4 75 1.6E-14 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_20080 90bb7ae15a784a4445ae0511b2991e42 350 Pfam PF13377 Periplasmic binding protein-like domain 172 344 3.6E-23 T 31-10-2018 DY252_20080 90bb7ae15a784a4445ae0511b2991e42 350 Gene3D G3DSA:3.40.50.2300 60 325 2.3E-58 T 31-10-2018 DY252_20080 90bb7ae15a784a4445ae0511b2991e42 350 Gene3D G3DSA:3.40.50.2300 164 310 2.3E-58 T 31-10-2018 DY252_20080 90bb7ae15a784a4445ae0511b2991e42 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 49 5.3E-10 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_20080 90bb7ae15a784a4445ae0511b2991e42 350 SUPERFAMILY SSF53822 66 346 3.53E-46 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_20080 90bb7ae15a784a4445ae0511b2991e42 350 SUPERFAMILY SSF47413 3 62 1.13E-12 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_20080 90bb7ae15a784a4445ae0511b2991e42 350 Gene3D G3DSA:1.10.260.40 1 59 2.7E-17 T 31-10-2018 DY252_20650 a11671045e47a752b1dd4ca03fe69b4f 483 Gene3D G3DSA:3.10.129.10 333 468 1.1E-32 T 31-10-2018 DY252_20650 a11671045e47a752b1dd4ca03fe69b4f 483 SUPERFAMILY SSF54637 335 483 2.05E-37 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_20650 a11671045e47a752b1dd4ca03fe69b4f 483 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 8 183 1.2E-40 T 31-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DY252_20650 a11671045e47a752b1dd4ca03fe69b4f 483 Gene3D G3DSA:3.40.50.720 1 187 2.2E-46 T 31-10-2018 DY252_20650 a11671045e47a752b1dd4ca03fe69b4f 483 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 189 254 6.8E-11 T 31-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DY252_20650 a11671045e47a752b1dd4ca03fe69b4f 483 SUPERFAMILY SSF48179 188 263 2.61E-10 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_20650 a11671045e47a752b1dd4ca03fe69b4f 483 Gene3D G3DSA:1.10.1040.10 188 312 1.1E-23 T 31-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DY252_20650 a11671045e47a752b1dd4ca03fe69b4f 483 Hamap MF_02129 L-carnitine dehydrogenase [lcdH]. 7 318 52.027 T 31-10-2018 IPR026578 L-carnitine dehydrogenase MetaCyc: PWY-3602|MetaCyc: PWY-7472 DY252_20650 a11671045e47a752b1dd4ca03fe69b4f 483 Pfam PF13279 Thioesterase-like superfamily 346 452 6.8E-18 T 31-10-2018 DY252_20650 a11671045e47a752b1dd4ca03fe69b4f 483 SUPERFAMILY SSF51735 5 184 3.74E-44 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_21940 62bf15255dc71aebb31e526a7fa6b328 308 Gene3D G3DSA:3.10.25.10 209 307 1.1E-22 T 31-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DY252_21940 62bf15255dc71aebb31e526a7fa6b328 308 SUPERFAMILY SSF50486 208 300 4.55E-25 T 31-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 DY252_21940 62bf15255dc71aebb31e526a7fa6b328 308 Pfam PF00551 Formyl transferase 5 183 6.4E-41 T 31-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DY252_21940 62bf15255dc71aebb31e526a7fa6b328 308 SUPERFAMILY SSF53328 1 206 9.16E-64 T 31-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DY252_21940 62bf15255dc71aebb31e526a7fa6b328 308 Pfam PF02911 Formyl transferase, C-terminal domain 206 298 1.8E-20 T 31-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DY252_21940 62bf15255dc71aebb31e526a7fa6b328 308 Gene3D G3DSA:3.40.50.170 1 208 1.6E-76 T 31-10-2018 DY252_21940 62bf15255dc71aebb31e526a7fa6b328 308 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 4 303 3.1E-86 T 31-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 DY252_21940 62bf15255dc71aebb31e526a7fa6b328 308 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 31-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DY252_21940 62bf15255dc71aebb31e526a7fa6b328 308 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 4 301 33.984 T 31-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 DY252_17870 314a3cabfd4106b0500307b7f94ea9b5 539 Gene3D G3DSA:3.20.20.70 7 328 2.8E-103 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_17870 314a3cabfd4106b0500307b7f94ea9b5 539 Gene3D G3DSA:3.30.160.270 401 527 9.9E-10 T 31-10-2018 DY252_17870 314a3cabfd4106b0500307b7f94ea9b5 539 SUPERFAMILY SSF51569 3 295 3.54E-77 T 31-10-2018 DY252_17870 314a3cabfd4106b0500307b7f94ea9b5 539 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 15 31 - T 31-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DY252_17870 314a3cabfd4106b0500307b7f94ea9b5 539 Pfam PF00682 HMGL-like 7 272 3.4E-41 T 31-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DY252_17870 314a3cabfd4106b0500307b7f94ea9b5 539 Pfam PF08502 LeuA allosteric (dimerisation) domain 379 528 5.5E-27 T 31-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DY252_17870 314a3cabfd4106b0500307b7f94ea9b5 539 SUPERFAMILY SSF110921 422 525 1.16E-21 T 31-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DY252_17870 314a3cabfd4106b0500307b7f94ea9b5 539 SMART SM00917 377 529 1.1E-26 T 31-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DY252_17870 314a3cabfd4106b0500307b7f94ea9b5 539 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 8 532 1.5E-204 T 31-10-2018 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101 DY252_18060 18c589ab98fc6b90f6737e71fabf29fd 339 Pfam PF01212 Beta-eliminating lyase 3 292 2.5E-54 T 31-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 DY252_18060 18c589ab98fc6b90f6737e71fabf29fd 339 SUPERFAMILY SSF53383 1 332 1.57E-78 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_18060 18c589ab98fc6b90f6737e71fabf29fd 339 Gene3D G3DSA:3.40.640.10 12 252 8.0E-108 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_18060 18c589ab98fc6b90f6737e71fabf29fd 339 Gene3D G3DSA:3.90.1150.10 5 331 8.0E-108 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_20670 4cffb34bf5c69f8a2cf93aaa6cb92677 172 Gene3D G3DSA:1.10.10.60 58 167 5.9E-25 T 31-10-2018 DY252_20670 4cffb34bf5c69f8a2cf93aaa6cb92677 172 SUPERFAMILY SSF46689 62 112 1.4E-6 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_20670 4cffb34bf5c69f8a2cf93aaa6cb92677 172 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 115 157 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_20670 4cffb34bf5c69f8a2cf93aaa6cb92677 172 SUPERFAMILY SSF46689 114 165 5.38E-8 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_20670 4cffb34bf5c69f8a2cf93aaa6cb92677 172 Gene3D G3DSA:3.40.50.880 1 44 2.0E-6 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_20670 4cffb34bf5c69f8a2cf93aaa6cb92677 172 Pfam PF12833 Helix-turn-helix domain 84 162 1.1E-19 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_20670 4cffb34bf5c69f8a2cf93aaa6cb92677 172 SMART SM00342 78 161 1.3E-19 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_12625 fd70919dbbf5bfff84e202f018385c60 373 PIRSF PIRSF038991 18 370 5.6E-82 T 31-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 DY252_12625 fd70919dbbf5bfff84e202f018385c60 373 Pfam PF05145 Transition state regulatory protein AbrB 52 361 7.0E-83 T 31-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 DY252_12625 fd70919dbbf5bfff84e202f018385c60 373 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 206 361 1.3E-37 T 31-10-2018 IPR017516 AbrB duplication DY252_12625 fd70919dbbf5bfff84e202f018385c60 373 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 31 182 3.6E-31 T 31-10-2018 IPR017516 AbrB duplication DY252_21405 f843d035cdfc199784d8a31681d95021 83 SUPERFAMILY SSF47413 4 79 1.37E-18 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_21405 f843d035cdfc199784d8a31681d95021 83 SMART SM00530 14 69 6.6E-11 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_21405 f843d035cdfc199784d8a31681d95021 83 Gene3D G3DSA:1.10.260.40 1 81 6.6E-18 T 31-10-2018 DY252_21405 f843d035cdfc199784d8a31681d95021 83 Pfam PF13560 Helix-turn-helix domain 10 66 3.8E-13 T 31-10-2018 DY252_06210 f49eda5f8eca716541998af714d63d83 343 Gene3D G3DSA:3.40.50.80 115 252 5.2E-28 T 31-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DY252_06210 f49eda5f8eca716541998af714d63d83 343 SUPERFAMILY SSF52343 104 247 8.91E-38 T 31-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DY252_06210 f49eda5f8eca716541998af714d63d83 343 Gene3D G3DSA:2.40.30.10 12 114 6.7E-22 T 31-10-2018 DY252_06210 f49eda5f8eca716541998af714d63d83 343 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 305 313 - T 31-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DY252_06210 f49eda5f8eca716541998af714d63d83 343 Pfam PF00970 Oxidoreductase FAD-binding domain 28 113 8.2E-10 T 31-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DY252_06210 f49eda5f8eca716541998af714d63d83 343 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 279 336 2.1E-9 T 31-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DY252_06210 f49eda5f8eca716541998af714d63d83 343 SUPERFAMILY SSF63380 12 113 1.11E-22 T 31-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DY252_06210 f49eda5f8eca716541998af714d63d83 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 45 57 1.9E-10 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_06210 f49eda5f8eca716541998af714d63d83 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 217 225 1.9E-10 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_06210 f49eda5f8eca716541998af714d63d83 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 108 117 1.9E-10 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_06210 f49eda5f8eca716541998af714d63d83 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 124 143 1.9E-10 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_06210 f49eda5f8eca716541998af714d63d83 343 Gene3D G3DSA:3.10.20.30 253 341 4.5E-16 T 31-10-2018 IPR012675 Beta-grasp domain superfamily DY252_06210 f49eda5f8eca716541998af714d63d83 343 SUPERFAMILY SSF54292 240 340 2.62E-20 T 31-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DY252_06210 f49eda5f8eca716541998af714d63d83 343 Pfam PF00175 Oxidoreductase NAD-binding domain 125 231 1.7E-11 T 31-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DY252_13745 9ca55287fca118da1e128aa14548067f 561 TIGRFAM TIGR01810 betA: choline dehydrogenase 11 543 5.9E-253 T 31-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 DY252_13745 9ca55287fca118da1e128aa14548067f 561 Pfam PF00732 GMC oxidoreductase 10 306 1.7E-95 T 31-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DY252_13745 9ca55287fca118da1e128aa14548067f 561 SUPERFAMILY SSF54373 301 483 1.18E-64 T 31-10-2018 DY252_13745 9ca55287fca118da1e128aa14548067f 561 Gene3D G3DSA:3.50.50.60 10 537 7.3E-186 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_13745 9ca55287fca118da1e128aa14548067f 561 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 265 279 - T 31-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DY252_13745 9ca55287fca118da1e128aa14548067f 561 Gene3D G3DSA:4.10.450.10 43 207 7.3E-186 T 31-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 DY252_13745 9ca55287fca118da1e128aa14548067f 561 Pfam PF05199 GMC oxidoreductase 398 533 1.9E-42 T 31-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 DY252_13745 9ca55287fca118da1e128aa14548067f 561 Gene3D G3DSA:3.30.410.40 162 480 7.3E-186 T 31-10-2018 DY252_13745 9ca55287fca118da1e128aa14548067f 561 SUPERFAMILY SSF51905 5 541 2.41E-90 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_13745 9ca55287fca118da1e128aa14548067f 561 PIRSF PIRSF000137 2 544 2.1E-156 T 31-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DY252_13745 9ca55287fca118da1e128aa14548067f 561 Gene3D G3DSA:1.10.1220.110 104 161 7.3E-186 T 31-10-2018 DY252_11280 bdfc089af0c26a4089fe5272031c6253 625 SMART SM00304 357 413 8.0E-4 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_11280 bdfc089af0c26a4089fe5272031c6253 625 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 442 619 2.7E-34 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_11280 bdfc089af0c26a4089fe5272031c6253 625 Gene3D G3DSA:3.30.70.1230 438 624 7.7E-55 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_11280 bdfc089af0c26a4089fe5272031c6253 625 SMART SM00044 409 605 2.9E-30 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_11280 bdfc089af0c26a4089fe5272031c6253 625 SUPERFAMILY SSF55073 440 623 2.67E-52 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_09940 20f2462cbb93a2f56756fa1acba227f3 217 SMART SM00419 159 207 4.5E-7 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_09940 20f2462cbb93a2f56756fa1acba227f3 217 Gene3D G3DSA:2.60.120.10 2 142 1.6E-42 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_09940 20f2462cbb93a2f56756fa1acba227f3 217 SUPERFAMILY SSF46785 148 216 3.79E-14 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_09940 20f2462cbb93a2f56756fa1acba227f3 217 SUPERFAMILY SSF51206 4 144 4.71E-30 T 31-10-2018 IPR018490 Cyclic nucleotide-binding-like DY252_09940 20f2462cbb93a2f56756fa1acba227f3 217 Pfam PF00027 Cyclic nucleotide-binding domain 28 115 1.4E-12 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_09940 20f2462cbb93a2f56756fa1acba227f3 217 Pfam PF13545 Crp-like helix-turn-helix domain 150 214 3.4E-14 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_09940 20f2462cbb93a2f56756fa1acba227f3 217 Gene3D G3DSA:1.10.10.10 143 217 2.6E-16 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_09940 20f2462cbb93a2f56756fa1acba227f3 217 SMART SM00100 9 132 0.0013 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_07450 03f1a0da9e5e110eebafd75f03c421f5 269 Pfam PF00455 DeoR C terminal sensor domain 76 233 1.0E-44 T 31-10-2018 IPR014036 DeoR C-terminal sensor domain DY252_07450 03f1a0da9e5e110eebafd75f03c421f5 269 SUPERFAMILY SSF46785 6 78 1.73E-12 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_07450 03f1a0da9e5e110eebafd75f03c421f5 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 3.8E-10 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_07450 03f1a0da9e5e110eebafd75f03c421f5 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 3.8E-10 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_07450 03f1a0da9e5e110eebafd75f03c421f5 269 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 31-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DY252_07450 03f1a0da9e5e110eebafd75f03c421f5 269 Pfam PF08220 DeoR-like helix-turn-helix domain 8 59 3.8E-16 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_07450 03f1a0da9e5e110eebafd75f03c421f5 269 SMART SM01134 74 235 8.3E-60 T 31-10-2018 DY252_07450 03f1a0da9e5e110eebafd75f03c421f5 269 SMART SM00420 8 60 2.2E-16 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_07450 03f1a0da9e5e110eebafd75f03c421f5 269 Gene3D G3DSA:3.30.750.70 73 136 6.5E-8 T 31-10-2018 DY252_07450 03f1a0da9e5e110eebafd75f03c421f5 269 SUPERFAMILY SSF100950 75 235 3.68E-25 T 31-10-2018 IPR037171 NagB/RpiA transferase-like DY252_07450 03f1a0da9e5e110eebafd75f03c421f5 269 Gene3D G3DSA:1.10.10.10 1 55 8.2E-8 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 SMART SM00091 142 208 2.8E-6 T 31-10-2018 IPR000014 PAS domain DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 SUPERFAMILY SSF55874 328 501 1.31E-34 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 Pfam PF13426 PAS domain 160 254 7.2E-8 T 31-10-2018 IPR000014 PAS domain DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 Gene3D G3DSA:1.10.287.130 255 338 4.4E-19 T 31-10-2018 DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 Pfam PF00072 Response regulator receiver domain 533 642 4.2E-20 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 Pfam PF00072 Response regulator receiver domain 8 117 4.4E-18 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 SUPERFAMILY SSF47384 266 340 1.31E-12 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 496 5.6E-16 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 457 5.6E-16 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 478 5.6E-16 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 443 5.6E-16 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 Gene3D G3DSA:3.30.565.10 343 509 9.1E-37 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 Pfam PF00512 His Kinase A (phospho-acceptor) domain 271 338 3.0E-11 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 Gene3D G3DSA:3.30.450.20 132 253 1.8E-22 T 31-10-2018 DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 SUPERFAMILY SSF52172 5 146 1.71E-26 T 31-10-2018 IPR011006 CheY-like superfamily DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 SUPERFAMILY SSF52172 530 650 5.12E-30 T 31-10-2018 IPR011006 CheY-like superfamily DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 138 262 1.3E-15 T 31-10-2018 IPR000014 PAS domain DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 Gene3D G3DSA:3.40.50.2300 523 653 3.0E-29 T 31-10-2018 DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 SUPERFAMILY SSF55785 129 253 2.62E-17 T 31-10-2018 IPR035965 PAS domain superfamily DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 384 498 3.4E-18 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 SMART SM00448 6 124 8.9E-22 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 SMART SM00448 531 645 4.1E-23 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 SMART SM00387 382 499 9.4E-29 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 SMART SM00388 270 340 1.9E-9 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_06860 efbf47dc53f090ebc5b65d720e7ec532 654 Gene3D G3DSA:3.40.50.2300 5 131 4.0E-24 T 31-10-2018 DY252_05770 c1b6bead9c1f479cdef041b363c72958 594 Pfam PF17289 Terminase RNaseH-like domain 410 566 2.9E-31 T 31-10-2018 IPR035421 Terminase, large subunit gp17-like DY252_05770 c1b6bead9c1f479cdef041b363c72958 594 Gene3D G3DSA:3.40.50.300 91 302 2.1E-20 T 31-10-2018 DY252_05770 c1b6bead9c1f479cdef041b363c72958 594 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 9 63 8.0E-14 T 31-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 DY252_05770 c1b6bead9c1f479cdef041b363c72958 594 Gene3D G3DSA:3.30.420.240 397 569 2.6E-11 T 31-10-2018 DY252_05770 c1b6bead9c1f479cdef041b363c72958 594 Pfam PF03237 Terminase-like family 160 381 2.0E-56 T 31-10-2018 IPR004921 Terminase large subunit, T4likevirus-type DY252_21880 d7b50d19ce1786bbb0aa745aabf14d56 517 SUPERFAMILY SSF158472 239 291 4.71E-6 T 31-10-2018 DY252_21880 d7b50d19ce1786bbb0aa745aabf14d56 517 Pfam PF13756 Stimulus-sensing domain 67 178 2.0E-21 T 31-10-2018 IPR025919 Stimulus-sensing domain DY252_21880 d7b50d19ce1786bbb0aa745aabf14d56 517 Pfam PF13755 Sensor N-terminal transmembrane domain 1 52 1.5E-11 T 31-10-2018 IPR025908 Sensor N-terminal transmembrane domain DY252_21880 d7b50d19ce1786bbb0aa745aabf14d56 517 SMART SM00387 402 517 5.6E-34 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_21880 d7b50d19ce1786bbb0aa745aabf14d56 517 Gene3D G3DSA:1.20.1480.50 198 299 5.4E-10 T 31-10-2018 DY252_21880 d7b50d19ce1786bbb0aa745aabf14d56 517 SUPERFAMILY SSF55874 349 516 1.7E-38 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_21880 d7b50d19ce1786bbb0aa745aabf14d56 517 Pfam PF00512 His Kinase A (phospho-acceptor) domain 296 358 2.6E-17 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_21880 d7b50d19ce1786bbb0aa745aabf14d56 517 SMART SM00304 238 293 5.8E-8 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_21880 d7b50d19ce1786bbb0aa745aabf14d56 517 Gene3D G3DSA:3.30.565.10 377 517 4.3E-38 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_21880 d7b50d19ce1786bbb0aa745aabf14d56 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 467 1.2E-12 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_21880 d7b50d19ce1786bbb0aa745aabf14d56 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 1.2E-12 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_21880 d7b50d19ce1786bbb0aa745aabf14d56 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 492 1.2E-12 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_21880 d7b50d19ce1786bbb0aa745aabf14d56 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 453 1.2E-12 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_21880 d7b50d19ce1786bbb0aa745aabf14d56 517 Gene3D G3DSA:1.10.287.130 300 355 4.3E-14 T 31-10-2018 DY252_21880 d7b50d19ce1786bbb0aa745aabf14d56 517 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 516 9.9E-23 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_21880 d7b50d19ce1786bbb0aa745aabf14d56 517 Pfam PF00672 HAMP domain 240 288 2.4E-9 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_21880 d7b50d19ce1786bbb0aa745aabf14d56 517 SMART SM00388 294 359 3.4E-18 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_21880 d7b50d19ce1786bbb0aa745aabf14d56 517 SUPERFAMILY SSF47384 278 358 4.51E-19 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_04910 e01698bbe09e62856d015747ab1f06ef 324 PRINTS PR00691 Adhesin B signature 32 53 4.0E-21 T 31-10-2018 IPR006129 Adhesin B GO:0007155 DY252_04910 e01698bbe09e62856d015747ab1f06ef 324 PRINTS PR00691 Adhesin B signature 238 255 4.0E-21 T 31-10-2018 IPR006129 Adhesin B GO:0007155 DY252_04910 e01698bbe09e62856d015747ab1f06ef 324 PRINTS PR00691 Adhesin B signature 76 95 4.0E-21 T 31-10-2018 IPR006129 Adhesin B GO:0007155 DY252_04910 e01698bbe09e62856d015747ab1f06ef 324 PRINTS PR00691 Adhesin B signature 189 206 4.0E-21 T 31-10-2018 IPR006129 Adhesin B GO:0007155 DY252_04910 e01698bbe09e62856d015747ab1f06ef 324 PRINTS PR00691 Adhesin B signature 57 75 4.0E-21 T 31-10-2018 IPR006129 Adhesin B GO:0007155 DY252_04910 e01698bbe09e62856d015747ab1f06ef 324 Gene3D G3DSA:3.40.50.1980 31 175 1.5E-43 T 31-10-2018 DY252_04910 e01698bbe09e62856d015747ab1f06ef 324 Gene3D G3DSA:3.40.50.1980 178 308 6.4E-43 T 31-10-2018 DY252_04910 e01698bbe09e62856d015747ab1f06ef 324 PRINTS PR00690 Adhesin family signature 273 292 5.3E-38 T 31-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DY252_04910 e01698bbe09e62856d015747ab1f06ef 324 PRINTS PR00690 Adhesin family signature 32 50 5.3E-38 T 31-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DY252_04910 e01698bbe09e62856d015747ab1f06ef 324 PRINTS PR00690 Adhesin family signature 242 260 5.3E-38 T 31-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DY252_04910 e01698bbe09e62856d015747ab1f06ef 324 PRINTS PR00690 Adhesin family signature 63 76 5.3E-38 T 31-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DY252_04910 e01698bbe09e62856d015747ab1f06ef 324 PRINTS PR00690 Adhesin family signature 189 210 5.3E-38 T 31-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DY252_04910 e01698bbe09e62856d015747ab1f06ef 324 PRINTS PR00690 Adhesin family signature 76 93 5.3E-38 T 31-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DY252_04910 e01698bbe09e62856d015747ab1f06ef 324 SUPERFAMILY SSF53807 32 308 4.61E-81 T 31-10-2018 DY252_04910 e01698bbe09e62856d015747ab1f06ef 324 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 305 3.2E-72 T 31-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 DY252_00325 69db73067192e783dad19ad14b0058e8 183 TIGRFAM TIGR00077 lspA: signal peptidase II 31 172 6.1E-32 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_00325 69db73067192e783dad19ad14b0058e8 183 ProSitePatterns PS00855 Signal peptidases II signature. 119 131 - T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_00325 69db73067192e783dad19ad14b0058e8 183 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 23 177 13.897 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_00325 69db73067192e783dad19ad14b0058e8 183 Pfam PF01252 Signal peptidase (SPase) II 33 168 3.6E-31 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_00325 69db73067192e783dad19ad14b0058e8 183 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 116 131 2.7E-16 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_00325 69db73067192e783dad19ad14b0058e8 183 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 152 168 2.7E-16 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_00325 69db73067192e783dad19ad14b0058e8 183 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 70 78 2.7E-16 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_15700 6a12c6d2849549874580db2476df228f 102 Pfam PF11747 Killing trait 11 74 5.2E-12 T 31-10-2018 IPR021070 Killing trait, RebB DY252_09770 8b4e1c87a737cecbbd57f2427ed1bf64 235 SUPERFAMILY SSF52833 3 79 3.41E-19 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_09770 8b4e1c87a737cecbbd57f2427ed1bf64 235 Gene3D G3DSA:1.20.1050.10 86 199 1.9E-29 T 31-10-2018 DY252_09770 8b4e1c87a737cecbbd57f2427ed1bf64 235 Gene3D G3DSA:3.40.30.10 5 85 1.9E-29 T 31-10-2018 DY252_09770 8b4e1c87a737cecbbd57f2427ed1bf64 235 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 78 4.2E-17 T 31-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DY252_09770 8b4e1c87a737cecbbd57f2427ed1bf64 235 SUPERFAMILY SSF47616 83 198 8.3E-9 T 31-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DY252_14225 d9375ae2c535523346c1144e91809a6d 363 PIRSF PIRSF039026 1 357 4.5E-126 T 31-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like DY252_14225 d9375ae2c535523346c1144e91809a6d 363 Gene3D G3DSA:3.40.190.10 152 324 1.6E-124 T 31-10-2018 DY252_14225 d9375ae2c535523346c1144e91809a6d 363 Gene3D G3DSA:3.40.190.170 29 337 1.6E-124 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_14225 d9375ae2c535523346c1144e91809a6d 363 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 51 319 1.2E-52 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_01470 8889f6f578cdac8f557552a09e46e7a5 418 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 37 392 3.0E-121 T 31-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 DY252_01470 8889f6f578cdac8f557552a09e46e7a5 418 SUPERFAMILY SSF102114 129 345 5.36E-13 T 31-10-2018 DY252_01470 8889f6f578cdac8f557552a09e46e7a5 418 Gene3D G3DSA:1.10.150.530 39 99 6.4E-21 T 31-10-2018 DY252_01470 8889f6f578cdac8f557552a09e46e7a5 418 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 39 389 71.953 T 31-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 DY252_01470 8889f6f578cdac8f557552a09e46e7a5 418 PIRSF PIRSF006004 31 401 1.4E-141 T 31-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 DY252_01470 8889f6f578cdac8f557552a09e46e7a5 418 Gene3D G3DSA:3.20.20.70 101 374 1.4E-102 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_01470 8889f6f578cdac8f557552a09e46e7a5 418 Pfam PF04055 Radical SAM superfamily 145 316 7.4E-16 T 31-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DY252_06110 fe9bb277001d98ef9a705c015575dde6 334 SUPERFAMILY SSF55347 124 287 1.64E-28 T 31-10-2018 DY252_06110 fe9bb277001d98ef9a705c015575dde6 334 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 1 326 4.2E-125 T 31-10-2018 IPR030827 Inositol 2-dehydrogenase DY252_06110 fe9bb277001d98ef9a705c015575dde6 334 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 161 238 7.5E-7 T 31-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DY252_06110 fe9bb277001d98ef9a705c015575dde6 334 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 119 1.2E-21 T 31-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DY252_06110 fe9bb277001d98ef9a705c015575dde6 334 Gene3D G3DSA:3.30.360.10 138 268 3.2E-95 T 31-10-2018 DY252_06110 fe9bb277001d98ef9a705c015575dde6 334 Gene3D G3DSA:3.40.50.720 3 316 3.2E-95 T 31-10-2018 DY252_06110 fe9bb277001d98ef9a705c015575dde6 334 SUPERFAMILY SSF51735 2 141 4.39E-41 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_19495 faa5a74fca8857c7e5f21383b0c6e233 98 PIRSF PIRSF003113 1 98 7.7E-30 T 31-10-2018 IPR002634 BolA protein DY252_19495 faa5a74fca8857c7e5f21383b0c6e233 98 SUPERFAMILY SSF82657 2 91 1.96E-27 T 31-10-2018 IPR036065 BolA-like superfamily DY252_19495 faa5a74fca8857c7e5f21383b0c6e233 98 Gene3D G3DSA:3.30.300.90 2 92 2.7E-31 T 31-10-2018 DY252_19495 faa5a74fca8857c7e5f21383b0c6e233 98 Pfam PF01722 BolA-like protein 11 88 1.1E-29 T 31-10-2018 IPR002634 BolA protein DY252_05890 1bb11b96131b8f59999a0cea7151b6fa 207 SUPERFAMILY SSF53056 2 195 3.27E-66 T 31-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DY252_05890 1bb11b96131b8f59999a0cea7151b6fa 207 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 40 47 - T 31-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DY252_05890 1bb11b96131b8f59999a0cea7151b6fa 207 SMART SM00947 28 191 3.5E-60 T 31-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DY252_05890 1bb11b96131b8f59999a0cea7151b6fa 207 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 80 100 - T 31-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DY252_05890 1bb11b96131b8f59999a0cea7151b6fa 207 Pfam PF00484 Carbonic anhydrase 36 186 1.3E-47 T 31-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DY252_05890 1bb11b96131b8f59999a0cea7151b6fa 207 Gene3D G3DSA:3.40.1050.10 1 203 9.2E-73 T 31-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DY252_06135 7a91b6c86b552e8c7a4e825144c59f1d 609 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 410 563 6.1E-36 T 31-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DY252_06135 7a91b6c86b552e8c7a4e825144c59f1d 609 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 196 7.4E-39 T 31-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DY252_06135 7a91b6c86b552e8c7a4e825144c59f1d 609 Gene3D G3DSA:3.40.50.970 391 574 7.6E-42 T 31-10-2018 DY252_06135 7a91b6c86b552e8c7a4e825144c59f1d 609 Gene3D G3DSA:3.40.50.1220 209 390 3.9E-40 T 31-10-2018 DY252_06135 7a91b6c86b552e8c7a4e825144c59f1d 609 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 216 350 2.7E-36 T 31-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DY252_06135 7a91b6c86b552e8c7a4e825144c59f1d 609 SUPERFAMILY SSF52518 389 595 2.14E-52 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_06135 7a91b6c86b552e8c7a4e825144c59f1d 609 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 5 606 1.1E-282 T 31-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 DY252_06135 7a91b6c86b552e8c7a4e825144c59f1d 609 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 446 465 - T 31-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DY252_06135 7a91b6c86b552e8c7a4e825144c59f1d 609 SUPERFAMILY SSF52518 2 206 1.72E-32 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_06135 7a91b6c86b552e8c7a4e825144c59f1d 609 SUPERFAMILY SSF52467 183 364 4.37E-43 T 31-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DY252_06135 7a91b6c86b552e8c7a4e825144c59f1d 609 Gene3D G3DSA:3.40.50.970 2 203 5.9E-32 T 31-10-2018 DY252_19645 07a0dc2f9195032da9331e5f84aaeade 1177 Gene3D G3DSA:3.40.50.300 938 1174 1.4E-46 T 31-10-2018 DY252_19645 07a0dc2f9195032da9331e5f84aaeade 1177 SUPERFAMILY SSF52540 3 1154 1.86E-46 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_19645 07a0dc2f9195032da9331e5f84aaeade 1177 Gene3D G3DSA:3.40.50.300 2 251 2.1E-41 T 31-10-2018 DY252_19645 07a0dc2f9195032da9331e5f84aaeade 1177 Pfam PF02463 RecF/RecN/SMC N terminal domain 5 1152 9.6E-59 T 31-10-2018 IPR003395 RecF/RecN/SMC, N-terminal DY252_19645 07a0dc2f9195032da9331e5f84aaeade 1177 PIRSF PIRSF005719 2 550 1.2E-106 T 31-10-2018 IPR024704 Structural maintenance of chromosomes protein DY252_19645 07a0dc2f9195032da9331e5f84aaeade 1177 PIRSF PIRSF005719 555 1167 1.3E-110 T 31-10-2018 IPR024704 Structural maintenance of chromosomes protein DY252_19645 07a0dc2f9195032da9331e5f84aaeade 1177 Hamap MF_01894 Chromosome partition protein Smc [smc]. 2 1161 21.209 T 31-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 DY252_19645 07a0dc2f9195032da9331e5f84aaeade 1177 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 3 1159 3.4E-258 T 31-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 DY252_19645 07a0dc2f9195032da9331e5f84aaeade 1177 SUPERFAMILY SSF75553 486 653 3.01E-7 T 31-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 DY252_16190 d2e8fd9704ffc4dde58fc650b59f008d 238 Pfam PF06267 Family of unknown function (DUF1028) 19 210 5.8E-58 T 31-10-2018 IPR010430 Protein of unknown function DUF1028 DY252_16190 d2e8fd9704ffc4dde58fc650b59f008d 238 Gene3D G3DSA:3.60.20.10 16 234 9.9E-71 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_16190 d2e8fd9704ffc4dde58fc650b59f008d 238 SUPERFAMILY SSF56235 18 235 2.16E-63 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_15735 6d1572893993f14e8e45aa897a5691f0 241 SUPERFAMILY SSF46894 132 235 1.36E-25 T 31-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DY252_15735 6d1572893993f14e8e45aa897a5691f0 241 SMART SM00448 5 116 2.9E-46 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_15735 6d1572893993f14e8e45aa897a5691f0 241 Pfam PF00072 Response regulator receiver domain 7 117 2.4E-30 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_15735 6d1572893993f14e8e45aa897a5691f0 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 234 4.9E-19 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_15735 6d1572893993f14e8e45aa897a5691f0 241 SUPERFAMILY SSF52172 3 125 3.56E-43 T 31-10-2018 IPR011006 CheY-like superfamily DY252_15735 6d1572893993f14e8e45aa897a5691f0 241 Gene3D G3DSA:3.40.50.2300 1 128 1.7E-39 T 31-10-2018 DY252_15735 6d1572893993f14e8e45aa897a5691f0 241 SMART SM00862 158 234 9.5E-21 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_15735 6d1572893993f14e8e45aa897a5691f0 241 Gene3D G3DSA:1.10.10.10 131 240 1.7E-29 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_12795 32c8344951426aee9ba9fef0d3c09055 186 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 6 179 1.8E-56 T 31-10-2018 IPR006008 Intracellular septation protein A GO:0016021 DY252_12795 32c8344951426aee9ba9fef0d3c09055 186 Pfam PF04279 Intracellular septation protein A 6 176 4.7E-57 T 31-10-2018 IPR006008 Intracellular septation protein A GO:0016021 DY252_12795 32c8344951426aee9ba9fef0d3c09055 186 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 5 179 17.981 T 31-10-2018 IPR006008 Intracellular septation protein A GO:0016021 DY252_20640 57052acb8b15be292ddc816a2f0fd5ee 668 Gene3D G3DSA:1.10.3020.10 149 222 1.3E-60 T 31-10-2018 DY252_20640 57052acb8b15be292ddc816a2f0fd5ee 668 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 18 503 1.2E-63 T 31-10-2018 IPR005674 CocE/Serine esterase GO:0016787 DY252_20640 57052acb8b15be292ddc816a2f0fd5ee 668 Gene3D G3DSA:3.40.50.1820 14 310 1.3E-60 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_20640 57052acb8b15be292ddc816a2f0fd5ee 668 SMART SM00939 286 546 2.3E-64 T 31-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 DY252_20640 57052acb8b15be292ddc816a2f0fd5ee 668 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 298 521 1.1E-44 T 31-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 DY252_20640 57052acb8b15be292ddc816a2f0fd5ee 668 SUPERFAMILY SSF49785 324 527 1.15E-47 T 31-10-2018 IPR008979 Galactose-binding-like domain superfamily DY252_20640 57052acb8b15be292ddc816a2f0fd5ee 668 SUPERFAMILY SSF53474 4 333 1.26E-64 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_20640 57052acb8b15be292ddc816a2f0fd5ee 668 Gene3D G3DSA:2.60.120.260 328 524 3.1E-35 T 31-10-2018 IPR008979 Galactose-binding-like domain superfamily DY252_20640 57052acb8b15be292ddc816a2f0fd5ee 668 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 18 269 2.1E-62 T 31-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 DY252_15325 cf79162290a633f15c37892dd4fe033e 245 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 31 203 1.1E-13 T 31-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DY252_15325 cf79162290a633f15c37892dd4fe033e 245 Gene3D G3DSA:3.40.50.10420 110 218 2.2E-7 T 31-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DY252_15325 cf79162290a633f15c37892dd4fe033e 245 SUPERFAMILY SSF100950 8 221 9.07E-17 T 31-10-2018 IPR037171 NagB/RpiA transferase-like DY252_17170 507cc81284f099c04075a42972580c3c 367 Gene3D G3DSA:2.40.30.170 226 347 2.5E-35 T 31-10-2018 DY252_17170 507cc81284f099c04075a42972580c3c 367 Gene3D G3DSA:2.40.50.100 44 77 2.5E-10 T 31-10-2018 DY252_17170 507cc81284f099c04075a42972580c3c 367 Gene3D G3DSA:1.10.287.470 78 105 2.5E-10 T 31-10-2018 DY252_17170 507cc81284f099c04075a42972580c3c 367 SUPERFAMILY SSF111369 188 261 1.1E-9 T 31-10-2018 DY252_17170 507cc81284f099c04075a42972580c3c 367 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 288 7.0E-17 T 31-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DY252_17170 507cc81284f099c04075a42972580c3c 367 SUPERFAMILY SSF111369 111 174 6.93E-6 T 31-10-2018 DY252_17170 507cc81284f099c04075a42972580c3c 367 Gene3D G3DSA:1.10.287.470 114 179 1.2E-11 T 31-10-2018 DY252_17170 507cc81284f099c04075a42972580c3c 367 Pfam PF00529 HlyD membrane-fusion protein of T1SS 289 334 6.2E-7 T 31-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DY252_17170 507cc81284f099c04075a42972580c3c 367 SUPERFAMILY SSF111369 44 130 1.29E-10 T 31-10-2018 DY252_19590 ec56f4df8034da8c9e81481521df5b36 317 Pfam PF01882 Protein of unknown function DUF58 47 133 1.1E-14 T 31-10-2018 IPR002881 Domain of unknown function DUF58 DY252_10545 a6d8b01a9f219fdf0a4c9f32d19b549d 1234 Pfam PF02867 Ribonucleotide reductase, barrel domain 809 914 2.6E-16 T 31-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DY252_10545 a6d8b01a9f219fdf0a4c9f32d19b549d 1234 SUPERFAMILY SSF75625 296 400 8.5E-10 T 31-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_10545 a6d8b01a9f219fdf0a4c9f32d19b549d 1234 Pfam PF02867 Ribonucleotide reductase, barrel domain 198 734 4.6E-105 T 31-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DY252_10545 a6d8b01a9f219fdf0a4c9f32d19b549d 1234 Gene3D G3DSA:3.20.70.20 375 766 8.6E-98 T 31-10-2018 DY252_10545 a6d8b01a9f219fdf0a4c9f32d19b549d 1234 Gene3D G3DSA:3.20.70.20 89 357 2.5E-54 T 31-10-2018 DY252_10545 a6d8b01a9f219fdf0a4c9f32d19b549d 1234 Gene3D G3DSA:3.20.70.20 778 929 2.2E-29 T 31-10-2018 DY252_10545 a6d8b01a9f219fdf0a4c9f32d19b549d 1234 SUPERFAMILY SSF51998 197 925 4.88E-125 T 31-10-2018 DY252_10545 a6d8b01a9f219fdf0a4c9f32d19b549d 1234 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 132 753 7.1E-142 T 31-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DY252_10545 a6d8b01a9f219fdf0a4c9f32d19b549d 1234 Pfam PF08471 Class II vitamin B12-dependent ribonucleotide reductase 31 147 4.2E-39 T 31-10-2018 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain GO:0004748|GO:0050897|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DY252_10545 a6d8b01a9f219fdf0a4c9f32d19b549d 1234 PRINTS PR01183 Ribonucleotide reductase large chain signature 544 566 1.1E-5 T 31-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DY252_10545 a6d8b01a9f219fdf0a4c9f32d19b549d 1234 PRINTS PR01183 Ribonucleotide reductase large chain signature 275 294 1.1E-5 T 31-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DY252_06145 6dbcef235e56d0de975a58f422e5b3b9 267 PIRSF PIRSF036628 1 267 1.8E-108 T 31-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 DY252_06145 6dbcef235e56d0de975a58f422e5b3b9 267 Gene3D G3DSA:2.60.120.10 18 123 1.1E-82 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_06145 6dbcef235e56d0de975a58f422e5b3b9 267 Pfam PF04962 KduI/IolB family 6 261 1.1E-106 T 31-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 DY252_06145 6dbcef235e56d0de975a58f422e5b3b9 267 Gene3D G3DSA:2.60.120.10 124 261 1.1E-82 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_06145 6dbcef235e56d0de975a58f422e5b3b9 267 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 16 261 5.9E-98 T 31-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 DY252_06145 6dbcef235e56d0de975a58f422e5b3b9 267 SUPERFAMILY SSF51182 14 250 4.55E-70 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_20180 fe6436a1e6e7216243376d839b0e8d51 339 Pfam PF16916 Dimerisation domain of Zinc Transporter 217 293 5.5E-20 T 31-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain DY252_20180 fe6436a1e6e7216243376d839b0e8d51 339 Gene3D G3DSA:3.30.70.1350 214 295 1.2E-22 T 31-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DY252_20180 fe6436a1e6e7216243376d839b0e8d51 339 Pfam PF01545 Cation efflux family 22 213 1.4E-37 T 31-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DY252_20180 fe6436a1e6e7216243376d839b0e8d51 339 Gene3D G3DSA:1.20.1510.10 16 213 4.9E-53 T 31-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DY252_20180 fe6436a1e6e7216243376d839b0e8d51 339 SUPERFAMILY SSF160240 217 294 1.96E-18 T 31-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DY252_20180 fe6436a1e6e7216243376d839b0e8d51 339 SUPERFAMILY SSF161111 14 214 5.23E-50 T 31-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DY252_20180 fe6436a1e6e7216243376d839b0e8d51 339 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 17 294 4.9E-64 T 31-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DY252_09045 afb896af2dd062a7f14ca6cb1d849bb3 177 SUPERFAMILY SSF56053 2 82 1.96E-23 T 31-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09045 afb896af2dd062a7f14ca6cb1d849bb3 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 31-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_09045 afb896af2dd062a7f14ca6cb1d849bb3 177 Gene3D G3DSA:3.90.930.12 1 82 1.1E-28 T 31-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09045 afb896af2dd062a7f14ca6cb1d849bb3 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.826 T 31-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DY252_09045 afb896af2dd062a7f14ca6cb1d849bb3 177 PIRSF PIRSF002162 1 177 2.3E-47 T 31-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09045 afb896af2dd062a7f14ca6cb1d849bb3 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 3.2E-73 T 31-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DY252_09045 afb896af2dd062a7f14ca6cb1d849bb3 177 Pfam PF00347 Ribosomal protein L6 11 82 6.8E-15 T 31-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09045 afb896af2dd062a7f14ca6cb1d849bb3 177 Pfam PF00347 Ribosomal protein L6 91 164 1.3E-18 T 31-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09045 afb896af2dd062a7f14ca6cb1d849bb3 177 Gene3D G3DSA:3.90.930.12 83 177 2.6E-38 T 31-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09045 afb896af2dd062a7f14ca6cb1d849bb3 177 SUPERFAMILY SSF56053 83 177 6.02E-36 T 31-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09045 afb896af2dd062a7f14ca6cb1d849bb3 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 3.7E-31 T 31-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DY252_09045 afb896af2dd062a7f14ca6cb1d849bb3 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 3.7E-31 T 31-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DY252_09045 afb896af2dd062a7f14ca6cb1d849bb3 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 3.7E-31 T 31-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DY252_07540 8837e65c92ee49afba84bf84d2138fbf 344 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 159 167 - T 31-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 DY252_07540 8837e65c92ee49afba84bf84d2138fbf 344 Gene3D G3DSA:3.40.190.10 40 309 9.1E-128 T 31-10-2018 DY252_07540 8837e65c92ee49afba84bf84d2138fbf 344 SUPERFAMILY SSF53850 33 342 5.02E-83 T 31-10-2018 DY252_07540 8837e65c92ee49afba84bf84d2138fbf 344 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 25 340 2.4E-136 T 31-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 DY252_07540 8837e65c92ee49afba84bf84d2138fbf 344 Pfam PF13531 Bacterial extracellular solute-binding protein 45 293 5.3E-41 T 31-10-2018 DY252_07540 8837e65c92ee49afba84bf84d2138fbf 344 Gene3D G3DSA:3.40.190.10 128 339 9.1E-128 T 31-10-2018 DY252_01190 88b777c35dc20a8544cc1cfc503e9f4a 346 Pfam PF13377 Periplasmic binding protein-like domain 177 331 2.4E-17 T 31-10-2018 DY252_01190 88b777c35dc20a8544cc1cfc503e9f4a 346 SMART SM00354 5 75 2.3E-7 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_01190 88b777c35dc20a8544cc1cfc503e9f4a 346 SUPERFAMILY SSF53822 76 330 1.03E-36 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_01190 88b777c35dc20a8544cc1cfc503e9f4a 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 1.7E-9 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_01190 88b777c35dc20a8544cc1cfc503e9f4a 346 SUPERFAMILY SSF47413 5 63 6.47E-13 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_01190 88b777c35dc20a8544cc1cfc503e9f4a 346 Gene3D G3DSA:3.40.50.2300 169 299 8.3E-53 T 31-10-2018 DY252_01190 88b777c35dc20a8544cc1cfc503e9f4a 346 Gene3D G3DSA:3.40.50.2300 83 320 8.3E-53 T 31-10-2018 DY252_01190 88b777c35dc20a8544cc1cfc503e9f4a 346 Gene3D G3DSA:1.10.260.40 2 62 1.1E-14 T 31-10-2018 DY252_12435 42cf557941eb85e21dc94c24c8dc375f 521 Gene3D G3DSA:1.10.730.10 342 517 3.1E-52 T 31-10-2018 DY252_12435 42cf557941eb85e21dc94c24c8dc375f 521 SUPERFAMILY SSF47323 354 510 7.66E-41 T 31-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_12435 42cf557941eb85e21dc94c24c8dc375f 521 Hamap MF_01228 Methionine--tRNA ligase [metG]. 4 510 48.8 T 31-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DY252_12435 42cf557941eb85e21dc94c24c8dc375f 521 Gene3D G3DSA:2.170.220.10 119 230 1.6E-158 T 31-10-2018 DY252_12435 42cf557941eb85e21dc94c24c8dc375f 521 Pfam PF09334 tRNA synthetases class I (M) 8 366 1.4E-110 T 31-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_12435 42cf557941eb85e21dc94c24c8dc375f 521 Gene3D G3DSA:3.40.50.620 8 338 1.6E-158 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_12435 42cf557941eb85e21dc94c24c8dc375f 521 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 483 1.2E-157 T 31-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DY252_12435 42cf557941eb85e21dc94c24c8dc375f 521 Pfam PF08264 Anticodon-binding domain of tRNA 387 474 6.2E-6 T 31-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DY252_12435 42cf557941eb85e21dc94c24c8dc375f 521 SUPERFAMILY SSF52374 5 352 1.88E-112 T 31-10-2018 DY252_12435 42cf557941eb85e21dc94c24c8dc375f 521 PRINTS PR01041 Methionyl-tRNA synthetase signature 261 276 5.7E-33 T 31-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DY252_12435 42cf557941eb85e21dc94c24c8dc375f 521 PRINTS PR01041 Methionyl-tRNA synthetase signature 228 239 5.7E-33 T 31-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DY252_12435 42cf557941eb85e21dc94c24c8dc375f 521 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 5.7E-33 T 31-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DY252_12435 42cf557941eb85e21dc94c24c8dc375f 521 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 5.7E-33 T 31-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DY252_12435 42cf557941eb85e21dc94c24c8dc375f 521 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 5.7E-33 T 31-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DY252_12435 42cf557941eb85e21dc94c24c8dc375f 521 PRINTS PR01041 Methionyl-tRNA synthetase signature 353 364 5.7E-33 T 31-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DY252_19090 fbc0dfa40ff010dae383bdaf8d92cb70 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 5.3E-8 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_19090 fbc0dfa40ff010dae383bdaf8d92cb70 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 5.3E-8 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_19090 fbc0dfa40ff010dae383bdaf8d92cb70 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 7.8E-16 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_19090 fbc0dfa40ff010dae383bdaf8d92cb70 233 Gene3D G3DSA:1.10.10.10 9 82 6.1E-20 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_19090 fbc0dfa40ff010dae383bdaf8d92cb70 233 SUPERFAMILY SSF64288 59 227 1.88E-32 T 31-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DY252_19090 fbc0dfa40ff010dae383bdaf8d92cb70 233 SUPERFAMILY SSF46785 8 75 8.78E-19 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_19090 fbc0dfa40ff010dae383bdaf8d92cb70 233 SMART SM00345 12 71 5.7E-12 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_19090 fbc0dfa40ff010dae383bdaf8d92cb70 233 Pfam PF07702 UTRA domain 93 215 3.0E-24 T 31-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DY252_19090 fbc0dfa40ff010dae383bdaf8d92cb70 233 Gene3D G3DSA:3.40.1410.10 91 226 8.2E-28 T 31-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DY252_19090 fbc0dfa40ff010dae383bdaf8d92cb70 233 SMART SM00866 92 229 5.2E-25 T 31-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 Gene3D G3DSA:3.30.450.20 171 285 6.2E-9 T 31-10-2018 DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 SUPERFAMILY SSF55785 187 298 2.24E-10 T 31-10-2018 IPR035965 PAS domain superfamily DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 SUPERFAMILY SSF55785 25 95 8.9E-11 T 31-10-2018 IPR035965 PAS domain superfamily DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 SUPERFAMILY SSF55874 379 530 1.44E-39 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 Pfam PF00989 PAS fold 27 77 1.7E-6 T 31-10-2018 IPR013767 PAS fold GO:0006355 DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 SMART SM00388 309 377 6.4E-12 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 SMART SM00091 25 91 2.4E-5 T 31-10-2018 IPR000014 PAS domain DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 SMART SM00091 176 242 7.4 T 31-10-2018 IPR000014 PAS domain DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 508 6.8E-16 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 471 6.8E-16 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 527 6.8E-16 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 172 295 1.2E-7 T 31-10-2018 IPR000014 PAS domain DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 SMART SM00387 419 530 9.4E-32 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 SUPERFAMILY SSF47384 295 375 1.53E-18 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 Pfam PF13426 PAS domain 187 288 0.17 T 31-10-2018 IPR000014 PAS domain DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 419 529 2.4E-23 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 Gene3D G3DSA:3.30.450.20 18 154 2.9E-15 T 31-10-2018 DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 Gene3D G3DSA:1.10.287.130 286 375 1.4E-17 T 31-10-2018 DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 Gene3D G3DSA:3.30.565.10 379 528 1.7E-36 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_04615 94f4217b6f90f69a6dbacac00eda410a 539 Pfam PF00512 His Kinase A (phospho-acceptor) domain 310 375 1.7E-11 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_18515 834e2ac8180a74557a73de846a8d33e7 265 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 31-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 DY252_18515 834e2ac8180a74557a73de846a8d33e7 265 Gene3D G3DSA:3.60.10.10 1 265 3.3E-63 T 31-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DY252_18515 834e2ac8180a74557a73de846a8d33e7 265 SUPERFAMILY SSF56219 1 265 4.32E-69 T 31-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DY252_18515 834e2ac8180a74557a73de846a8d33e7 265 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 263 2.1E-61 T 31-10-2018 DY252_18515 834e2ac8180a74557a73de846a8d33e7 265 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 264 9.2E-57 T 31-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 DY252_18515 834e2ac8180a74557a73de846a8d33e7 265 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 256 8.4E-18 T 31-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DY252_12555 41900caa654a2a1bfa1d94363f6d2fab 537 Gene3D G3DSA:3.40.50.300 17 259 3.7E-57 T 31-10-2018 DY252_12555 41900caa654a2a1bfa1d94363f6d2fab 537 Pfam PF00005 ABC transporter 41 191 2.6E-33 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_12555 41900caa654a2a1bfa1d94363f6d2fab 537 SMART SM00382 50 239 2.7E-12 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_12555 41900caa654a2a1bfa1d94363f6d2fab 537 SUPERFAMILY SSF52540 24 244 1.48E-56 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12555 41900caa654a2a1bfa1d94363f6d2fab 537 SUPERFAMILY SSF52540 292 508 3.47E-41 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12555 41900caa654a2a1bfa1d94363f6d2fab 537 Gene3D G3DSA:3.40.50.300 284 536 4.6E-44 T 31-10-2018 DY252_12555 41900caa654a2a1bfa1d94363f6d2fab 537 ProSitePatterns PS00211 ABC transporters family signature. 421 435 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_12555 41900caa654a2a1bfa1d94363f6d2fab 537 Pfam PF00005 ABC transporter 292 448 3.1E-14 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_20540 25e4c69e3cda188ea93c537d75b9fa5f 377 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 356 5.1E-160 T 31-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 DY252_20540 25e4c69e3cda188ea93c537d75b9fa5f 377 PIRSF PIRSF007313 1 366 1.4E-159 T 31-10-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 DY252_17830 5955fb24a3611fbc453d972378bd2894 302 Pfam PF00892 EamA-like transporter family 13 147 2.9E-14 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_17830 5955fb24a3611fbc453d972378bd2894 302 TIGRFAM TIGR00688 rarD: protein RarD 15 264 1.3E-62 T 31-10-2018 IPR004626 RarD protein GO:0005887 DY252_17830 5955fb24a3611fbc453d972378bd2894 302 SUPERFAMILY SSF103481 212 291 1.23E-8 T 31-10-2018 DY252_17830 5955fb24a3611fbc453d972378bd2894 302 SUPERFAMILY SSF103481 54 148 6.41E-12 T 31-10-2018 DY252_20115 8d3f9ed8726c6a4f370750374d629b18 302 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 252 293 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_20115 8d3f9ed8726c6a4f370750374d629b18 302 SMART SM00342 215 297 3.6E-25 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_20115 8d3f9ed8726c6a4f370750374d629b18 302 Gene3D G3DSA:2.60.120.10 20 113 4.1E-5 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_20115 8d3f9ed8726c6a4f370750374d629b18 302 Gene3D G3DSA:1.10.10.60 198 301 1.2E-28 T 31-10-2018 DY252_20115 8d3f9ed8726c6a4f370750374d629b18 302 Pfam PF12833 Helix-turn-helix domain 221 297 7.8E-22 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_20115 8d3f9ed8726c6a4f370750374d629b18 302 SUPERFAMILY SSF46689 251 298 1.08E-9 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_20115 8d3f9ed8726c6a4f370750374d629b18 302 SUPERFAMILY SSF51215 46 158 3.01E-20 T 31-10-2018 IPR037923 Transcription regulator HTH-like DY252_20115 8d3f9ed8726c6a4f370750374d629b18 302 Pfam PF02311 AraC-like ligand binding domain 38 165 3.0E-21 T 31-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DY252_20115 8d3f9ed8726c6a4f370750374d629b18 302 SUPERFAMILY SSF46689 198 248 6.72E-12 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_01710 3eda1ee2e2d83234fc1198e73d56c62d 333 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 330 1.1E-99 T 31-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DY252_01710 3eda1ee2e2d83234fc1198e73d56c62d 333 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 4.9E-26 T 31-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DY252_01710 3eda1ee2e2d83234fc1198e73d56c62d 333 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 4.9E-26 T 31-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DY252_01710 3eda1ee2e2d83234fc1198e73d56c62d 333 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 4.9E-26 T 31-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DY252_01710 3eda1ee2e2d83234fc1198e73d56c62d 333 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 140 161 4.9E-26 T 31-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DY252_01710 3eda1ee2e2d83234fc1198e73d56c62d 333 SUPERFAMILY SSF52374 3 330 4.13E-97 T 31-10-2018 DY252_01710 3eda1ee2e2d83234fc1198e73d56c62d 333 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 19 - T 31-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_01710 3eda1ee2e2d83234fc1198e73d56c62d 333 Pfam PF00579 tRNA synthetases class I (W and Y) 3 281 3.3E-78 T 31-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_01710 3eda1ee2e2d83234fc1198e73d56c62d 333 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 331 39.197 T 31-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 DY252_01710 3eda1ee2e2d83234fc1198e73d56c62d 333 Gene3D G3DSA:1.10.240.10 186 298 5.1E-132 T 31-10-2018 DY252_01710 3eda1ee2e2d83234fc1198e73d56c62d 333 Gene3D G3DSA:3.40.50.620 3 329 5.1E-132 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_20880 6d4ac6dd6068be634a795ade80b92c44 253 SUPERFAMILY SSF52833 19 81 2.35E-12 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_20880 6d4ac6dd6068be634a795ade80b92c44 253 Gene3D G3DSA:3.40.30.10 14 82 1.2E-10 T 31-10-2018 DY252_20880 6d4ac6dd6068be634a795ade80b92c44 253 Pfam PF00462 Glutaredoxin 19 71 1.5E-5 T 31-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DY252_20880 6d4ac6dd6068be634a795ade80b92c44 253 Pfam PF07291 Methylamine utilisation protein MauE 122 243 2.1E-4 T 31-10-2018 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 Pfam PF04539 Sigma-70 region 3 537 612 4.6E-30 T 31-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 Pfam PF04542 Sigma-70 region 2 458 527 2.1E-21 T 31-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 651 677 - T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 SUPERFAMILY SSF88659 531 604 3.18E-21 T 31-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 PRINTS PR00046 Major sigma-70 factor signature 666 677 6.9E-31 T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 PRINTS PR00046 Major sigma-70 factor signature 630 642 6.9E-31 T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 PRINTS PR00046 Major sigma-70 factor signature 651 666 6.9E-31 T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 PRINTS PR00046 Major sigma-70 factor signature 482 495 6.9E-31 T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 PRINTS PR00046 Major sigma-70 factor signature 506 514 6.9E-31 T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 Gene3D G3DSA:1.10.220.120 24 86 1.3E-19 T 31-10-2018 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 SUPERFAMILY SSF88659 588 690 8.11E-27 T 31-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 482 495 - T 31-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 Pfam PF00140 Sigma-70 factor, region 1.2 109 140 1.9E-13 T 31-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 Pfam PF03979 Sigma-70 factor, region 1.1 25 93 2.6E-21 T 31-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 Pfam PF04545 Sigma-70, region 4 626 679 1.8E-18 T 31-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 SUPERFAMILY SSF88946 126 525 1.46E-93 T 31-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 25 691 43.315 T 31-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 Gene3D G3DSA:1.10.601.10 225 527 8.6E-96 T 31-10-2018 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 Gene3D G3DSA:1.20.120.1810 105 224 3.9E-11 T 31-10-2018 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 Gene3D G3DSA:1.10.10.10 608 691 4.9E-36 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 454 690 2.3E-120 T 31-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 Pfam PF04546 Sigma-70, non-essential region 151 421 6.8E-42 T 31-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 454 679 6.6E-39 T 31-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DY252_05555 150fc0f370be66781ed2a27d20d76f1b 692 Gene3D G3DSA:1.10.10.10 531 606 9.1E-33 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_08730 9891b22edb9877330d4391ee3ba68f19 610 Pfam PF00920 Dehydratase family 67 599 3.7E-167 T 31-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DY252_08730 9891b22edb9877330d4391ee3ba68f19 610 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 4 601 0.0 T 31-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 DY252_08730 9891b22edb9877330d4391ee3ba68f19 610 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 31-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DY252_08730 9891b22edb9877330d4391ee3ba68f19 610 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 1 603 58.107 T 31-10-2018 DY252_08730 9891b22edb9877330d4391ee3ba68f19 610 SUPERFAMILY SSF143975 2 418 1.7E-149 T 31-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DY252_08730 9891b22edb9877330d4391ee3ba68f19 610 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 31-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DY252_08730 9891b22edb9877330d4391ee3ba68f19 610 SUPERFAMILY SSF52016 419 601 2.59E-58 T 31-10-2018 DY252_08730 9891b22edb9877330d4391ee3ba68f19 610 Gene3D G3DSA:3.50.30.80 419 568 5.1E-54 T 31-10-2018 DY252_18230 e192e878e791300a4e543e0476a93e70 243 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 7 128 1.0E-11 T 31-10-2018 IPR007172 Domain of unknown function DUF374 DY252_18230 e192e878e791300a4e543e0476a93e70 243 Pfam PF04028 Domain of unknown function (DUF374) 62 128 3.3E-26 T 31-10-2018 IPR007172 Domain of unknown function DUF374 DY252_10195 c3608cb36e679919f67dd268a75bbce0 236 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 1.1E-9 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_10195 c3608cb36e679919f67dd268a75bbce0 236 SUPERFAMILY SSF46689 10 84 3.14E-13 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_10195 c3608cb36e679919f67dd268a75bbce0 236 Gene3D G3DSA:1.10.357.10 13 230 7.0E-41 T 31-10-2018 DY252_10195 c3608cb36e679919f67dd268a75bbce0 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 1.8E-6 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_10195 c3608cb36e679919f67dd268a75bbce0 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 1.8E-6 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_13035 b0ea935de080013189d27c85b5dd8451 457 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 453 2.6E-96 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_13035 b0ea935de080013189d27c85b5dd8451 457 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 14 448 5.9E-93 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_17360 16ab8155b2900e2e31cf53f6308f5f63 350 SUPERFAMILY SSF53474 22 310 2.24E-23 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_17360 16ab8155b2900e2e31cf53f6308f5f63 350 PIRSF PIRSF031982 5 350 2.7E-67 T 31-10-2018 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL DY252_05370 2c0d28db2cef86f3024d3393f9070b3f 307 Gene3D G3DSA:1.10.10.10 2 89 1.4E-27 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_05370 2c0d28db2cef86f3024d3393f9070b3f 307 SUPERFAMILY SSF53850 91 300 6.08E-45 T 31-10-2018 DY252_05370 2c0d28db2cef86f3024d3393f9070b3f 307 Gene3D G3DSA:3.40.190.10 165 269 9.6E-68 T 31-10-2018 DY252_05370 2c0d28db2cef86f3024d3393f9070b3f 307 SUPERFAMILY SSF46785 6 115 1.18E-22 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_05370 2c0d28db2cef86f3024d3393f9070b3f 307 Pfam PF03466 LysR substrate binding domain 91 298 1.4E-48 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_05370 2c0d28db2cef86f3024d3393f9070b3f 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 4.4E-19 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_05370 2c0d28db2cef86f3024d3393f9070b3f 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.1E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_05370 2c0d28db2cef86f3024d3393f9070b3f 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.1E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_05370 2c0d28db2cef86f3024d3393f9070b3f 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.1E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_05370 2c0d28db2cef86f3024d3393f9070b3f 307 Gene3D G3DSA:3.40.190.10 96 291 9.6E-68 T 31-10-2018 DY252_10850 6c48b3f162aa75900aec74f927fa74ad 352 Pfam PF13489 Methyltransferase domain 85 211 4.8E-12 T 31-10-2018 DY252_10850 6c48b3f162aa75900aec74f927fa74ad 352 Gene3D G3DSA:3.40.50.720 260 344 1.6E-9 T 31-10-2018 DY252_10850 6c48b3f162aa75900aec74f927fa74ad 352 Gene3D G3DSA:3.40.50.150 57 215 7.9E-23 T 31-10-2018 DY252_10850 6c48b3f162aa75900aec74f927fa74ad 352 SUPERFAMILY SSF53335 94 213 2.36E-15 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_10850 6c48b3f162aa75900aec74f927fa74ad 352 Pfam PF08484 C-methyltransferase C-terminal domain 258 337 3.1E-7 T 31-10-2018 IPR013691 C-methyltransferase DY252_01250 3224e8216222b819d268c6dea612471a 469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 335 458 1.5E-22 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_01250 3224e8216222b819d268c6dea612471a 469 SUPERFAMILY SSF47384 210 289 4.51E-18 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_01250 3224e8216222b819d268c6dea612471a 469 SMART SM00388 222 289 5.8E-19 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_01250 3224e8216222b819d268c6dea612471a 469 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 287 4.8E-17 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_01250 3224e8216222b819d268c6dea612471a 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 1.9E-15 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_01250 3224e8216222b819d268c6dea612471a 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 1.9E-15 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_01250 3224e8216222b819d268c6dea612471a 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 1.9E-15 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_01250 3224e8216222b819d268c6dea612471a 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.9E-15 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_01250 3224e8216222b819d268c6dea612471a 469 SUPERFAMILY SSF55874 278 459 4.19E-39 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_01250 3224e8216222b819d268c6dea612471a 469 SMART SM00387 335 459 1.1E-32 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_01250 3224e8216222b819d268c6dea612471a 469 Gene3D G3DSA:3.30.565.10 293 463 2.1E-39 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_01250 3224e8216222b819d268c6dea612471a 469 Gene3D G3DSA:3.30.450.20 102 217 1.5E-5 T 31-10-2018 DY252_01250 3224e8216222b819d268c6dea612471a 469 Gene3D G3DSA:1.10.287.130 218 292 3.7E-20 T 31-10-2018 DY252_10555 bdf2b9893fea19c966f9ded2b5f5ca88 120 Pfam PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 14 118 4.5E-25 T 31-10-2018 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 Reactome: R-HSA-6799198 DY252_12535 cbe289f01c78daab7f4ef2533568d474 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 248 5.8E-43 T 31-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DY252_12535 cbe289f01c78daab7f4ef2533568d474 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 256 365 7.2E-23 T 31-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DY252_12535 cbe289f01c78daab7f4ef2533568d474 411 SMART SM00825 Beta-ketoacyl synthase 5 372 3.4E-9 T 31-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DY252_12535 cbe289f01c78daab7f4ef2533568d474 411 SUPERFAMILY SSF53901 216 407 1.63E-51 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_12535 cbe289f01c78daab7f4ef2533568d474 411 Gene3D G3DSA:3.40.47.10 262 409 1.6E-39 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_12535 cbe289f01c78daab7f4ef2533568d474 411 SUPERFAMILY SSF53901 3 253 2.4E-56 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_12535 cbe289f01c78daab7f4ef2533568d474 411 Gene3D G3DSA:3.40.47.10 1 257 1.4E-60 T 31-10-2018 IPR016039 Thiolase-like GO:0003824 DY252_12535 cbe289f01c78daab7f4ef2533568d474 411 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 157 173 - T 31-10-2018 IPR018201 Beta-ketoacyl synthase, active site DY252_15645 1a5971c180538a83f03a3f137fe9224e 260 SUPERFAMILY SSF100950 82 235 9.42E-23 T 31-10-2018 IPR037171 NagB/RpiA transferase-like DY252_15645 1a5971c180538a83f03a3f137fe9224e 260 Pfam PF08220 DeoR-like helix-turn-helix domain 13 62 8.1E-14 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_15645 1a5971c180538a83f03a3f137fe9224e 260 Gene3D G3DSA:3.30.750.70 79 147 1.6E-6 T 31-10-2018 DY252_15645 1a5971c180538a83f03a3f137fe9224e 260 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 31 45 3.1E-5 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_15645 1a5971c180538a83f03a3f137fe9224e 260 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 45 63 3.1E-5 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_15645 1a5971c180538a83f03a3f137fe9224e 260 SMART SM00420 13 65 1.2E-10 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_15645 1a5971c180538a83f03a3f137fe9224e 260 Pfam PF00455 DeoR C terminal sensor domain 81 236 4.2E-40 T 31-10-2018 IPR014036 DeoR C-terminal sensor domain DY252_15645 1a5971c180538a83f03a3f137fe9224e 260 Gene3D G3DSA:1.10.10.10 5 51 5.0E-7 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_15645 1a5971c180538a83f03a3f137fe9224e 260 SUPERFAMILY SSF46785 10 74 2.44E-11 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_15645 1a5971c180538a83f03a3f137fe9224e 260 SMART SM01134 79 240 2.5E-48 T 31-10-2018 DY252_16050 92c6d8b05b71ba7465750cf68d2391d4 267 SUPERFAMILY SSF161098 7 266 1.03E-59 T 31-10-2018 IPR035906 MetI-like superfamily DY252_16050 92c6d8b05b71ba7465750cf68d2391d4 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 256 3.4E-12 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_16050 92c6d8b05b71ba7465750cf68d2391d4 267 Gene3D G3DSA:1.10.3720.10 6 260 4.0E-50 T 31-10-2018 IPR035906 MetI-like superfamily DY252_16005 a941d052f0076b4f794cdb9d81b9026d 374 SUPERFAMILY SSF53807 26 343 5.1E-46 T 31-10-2018 DY252_16005 a941d052f0076b4f794cdb9d81b9026d 374 Gene3D G3DSA:3.40.50.1980 25 371 3.6E-99 T 31-10-2018 DY252_16005 a941d052f0076b4f794cdb9d81b9026d 374 Pfam PF01497 Periplasmic binding protein 101 295 8.4E-21 T 31-10-2018 IPR002491 ABC transporter periplasmic binding domain DY252_15195 24ddcb6f6a409b07047de5f5a19fc85a 426 Gene3D G3DSA:1.10.4030.30 36 281 2.0E-54 T 31-10-2018 DY252_15195 24ddcb6f6a409b07047de5f5a19fc85a 426 Pfam PF00639 PPIC-type PPIASE domain 192 273 4.2E-20 T 31-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 DY252_15195 24ddcb6f6a409b07047de5f5a19fc85a 426 SUPERFAMILY SSF109998 36 196 6.67E-26 T 31-10-2018 IPR027304 Trigger factor/SurA domain superfamily DY252_15195 24ddcb6f6a409b07047de5f5a19fc85a 426 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 215 235 - T 31-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 DY252_15195 24ddcb6f6a409b07047de5f5a19fc85a 426 Pfam PF13624 SurA N-terminal domain 11 149 3.4E-13 T 31-10-2018 DY252_15195 24ddcb6f6a409b07047de5f5a19fc85a 426 Gene3D G3DSA:3.10.50.40 178 277 2.0E-54 T 31-10-2018 DY252_15195 24ddcb6f6a409b07047de5f5a19fc85a 426 SUPERFAMILY SSF54534 178 277 7.85E-25 T 31-10-2018 DY252_15195 24ddcb6f6a409b07047de5f5a19fc85a 426 SUPERFAMILY SSF54534 289 386 4.97E-8 T 31-10-2018 DY252_05345 815baa22d0e81bd20fac5b45bc226d36 367 SUPERFAMILY SSF81271 283 364 7.63E-35 T 31-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DY252_05345 815baa22d0e81bd20fac5b45bc226d36 367 SUPERFAMILY SSF52540 3 305 4.97E-81 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_05345 815baa22d0e81bd20fac5b45bc226d36 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.1E-34 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_05345 815baa22d0e81bd20fac5b45bc226d36 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 1.1E-34 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_05345 815baa22d0e81bd20fac5b45bc226d36 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 1.1E-34 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_05345 815baa22d0e81bd20fac5b45bc226d36 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 1.1E-34 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_05345 815baa22d0e81bd20fac5b45bc226d36 367 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 367 8.8E-153 T 31-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DY252_05345 815baa22d0e81bd20fac5b45bc226d36 367 Gene3D G3DSA:3.10.20.30 49 365 2.9E-150 T 31-10-2018 IPR012675 Beta-grasp domain superfamily DY252_05345 815baa22d0e81bd20fac5b45bc226d36 367 Pfam PF01926 50S ribosome-binding GTPase 5 124 1.3E-24 T 31-10-2018 IPR006073 GTP binding domain GO:0005525 DY252_05345 815baa22d0e81bd20fac5b45bc226d36 367 Pfam PF06071 Protein of unknown function (DUF933) 283 366 1.3E-38 T 31-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 DY252_05345 815baa22d0e81bd20fac5b45bc226d36 367 Gene3D G3DSA:3.40.50.300 4 282 2.9E-150 T 31-10-2018 DY252_05345 815baa22d0e81bd20fac5b45bc226d36 367 PIRSF PIRSF006641 1 367 8.6E-158 T 31-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DY252_05345 815baa22d0e81bd20fac5b45bc226d36 367 Gene3D G3DSA:1.10.150.300 114 202 2.9E-150 T 31-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 DY252_05345 815baa22d0e81bd20fac5b45bc226d36 367 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 367 43.894 T 31-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DY252_05880 9a3112c662f1b9e92c2384bc0680af5f 242 Pfam PF00106 short chain dehydrogenase 8 196 1.8E-50 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05880 9a3112c662f1b9e92c2384bc0680af5f 242 SUPERFAMILY SSF51735 2 232 5.64E-61 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_05880 9a3112c662f1b9e92c2384bc0680af5f 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_05880 9a3112c662f1b9e92c2384bc0680af5f 242 Gene3D G3DSA:3.40.50.720 1 242 1.1E-65 T 31-10-2018 DY252_05880 9a3112c662f1b9e92c2384bc0680af5f 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.2E-26 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05880 9a3112c662f1b9e92c2384bc0680af5f 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.2E-26 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05880 9a3112c662f1b9e92c2384bc0680af5f 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.2E-26 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05880 9a3112c662f1b9e92c2384bc0680af5f 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.2E-26 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05880 9a3112c662f1b9e92c2384bc0680af5f 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.2E-26 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05880 9a3112c662f1b9e92c2384bc0680af5f 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.2E-26 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_20835 6f75b7d61ca857cf0e5d66ba01535f2f 113 Pfam PF12840 Helix-turn-helix domain 26 84 6.9E-12 T 31-10-2018 DY252_20835 6f75b7d61ca857cf0e5d66ba01535f2f 113 SUPERFAMILY SSF46785 14 105 1.65E-22 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_20835 6f75b7d61ca857cf0e5d66ba01535f2f 113 Gene3D G3DSA:1.10.10.10 12 113 3.2E-26 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_20835 6f75b7d61ca857cf0e5d66ba01535f2f 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 75 90 6.7E-13 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_20835 6f75b7d61ca857cf0e5d66ba01535f2f 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 58 6.7E-13 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_20835 6f75b7d61ca857cf0e5d66ba01535f2f 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 43 6.7E-13 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_20835 6f75b7d61ca857cf0e5d66ba01535f2f 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 6.7E-13 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_20835 6f75b7d61ca857cf0e5d66ba01535f2f 113 SMART SM00418 26 104 1.4E-24 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_08335 234f365821b581c1b4bbcc8e79581526 306 SUPERFAMILY SSF103481 54 151 1.44E-10 T 31-10-2018 DY252_08335 234f365821b581c1b4bbcc8e79581526 306 SUPERFAMILY SSF103481 203 296 6.67E-9 T 31-10-2018 DY252_08335 234f365821b581c1b4bbcc8e79581526 306 Pfam PF00892 EamA-like transporter family 19 150 1.0E-9 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_08335 234f365821b581c1b4bbcc8e79581526 306 Pfam PF00892 EamA-like transporter family 165 296 1.7E-9 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 TIGRFAM TIGR00838 argH: argininosuccinate lyase 15 468 1.3E-181 T 31-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 Pfam PF14698 Argininosuccinate lyase C-terminal 376 445 7.6E-26 T 31-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 Pfam PF00206 Lyase 18 313 2.3E-76 T 31-10-2018 IPR022761 Fumarate lyase, N-terminal DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 Gene3D G3DSA:1.10.40.30 373 446 1.4E-185 T 31-10-2018 DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 Gene3D G3DSA:1.10.275.10 37 242 1.4E-185 T 31-10-2018 IPR024083 Fumarase/histidase, N-terminal DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 ProSitePatterns PS00163 Fumarate lyases signature. 288 297 - T 31-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 PRINTS PR00145 Argininosuccinate lyase family signature 113 135 8.8E-67 T 31-10-2018 DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 PRINTS PR00145 Argininosuccinate lyase family signature 155 175 8.8E-67 T 31-10-2018 DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 PRINTS PR00145 Argininosuccinate lyase family signature 206 222 8.8E-67 T 31-10-2018 DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 PRINTS PR00145 Argininosuccinate lyase family signature 323 342 8.8E-67 T 31-10-2018 DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 PRINTS PR00145 Argininosuccinate lyase family signature 288 304 8.8E-67 T 31-10-2018 DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 PRINTS PR00145 Argininosuccinate lyase family signature 244 268 8.8E-67 T 31-10-2018 DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 SUPERFAMILY SSF48557 18 468 7.23E-144 T 31-10-2018 IPR008948 L-Aspartase-like GO:0003824 DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 PRINTS PR00149 Fumarate lyase superfamily signature 244 271 8.1E-30 T 31-10-2018 IPR000362 Fumarate lyase family DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 PRINTS PR00149 Fumarate lyase superfamily signature 114 132 8.1E-30 T 31-10-2018 IPR000362 Fumarate lyase family DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 PRINTS PR00149 Fumarate lyase superfamily signature 160 178 8.1E-30 T 31-10-2018 IPR000362 Fumarate lyase family DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 PRINTS PR00149 Fumarate lyase superfamily signature 288 304 8.1E-30 T 31-10-2018 IPR000362 Fumarate lyase family DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 Gene3D G3DSA:1.20.200.10 131 461 1.4E-185 T 31-10-2018 DY252_04115 068fc4e7aad34d09cc588ac3ecc55507 471 Hamap MF_00006 Argininosuccinate lyase [argH]. 14 467 41.089 T 31-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DY252_08250 6dc2ada91acb28d943994a1133cf13f2 379 Gene3D G3DSA:2.60.40.420 113 288 1.8E-49 T 31-10-2018 IPR008972 Cupredoxin DY252_08250 6dc2ada91acb28d943994a1133cf13f2 379 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 15 246 1.8E-107 T 31-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 DY252_08250 6dc2ada91acb28d943994a1133cf13f2 379 Gene3D G3DSA:1.10.287.90 27 112 2.3E-32 T 31-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08250 6dc2ada91acb28d943994a1133cf13f2 379 SUPERFAMILY SSF49503 129 287 6.9E-47 T 31-10-2018 IPR008972 Cupredoxin DY252_08250 6dc2ada91acb28d943994a1133cf13f2 379 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 157 227 1.7E-5 T 31-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08250 6dc2ada91acb28d943994a1133cf13f2 379 SUPERFAMILY SSF81464 18 116 1.8E-23 T 31-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08250 6dc2ada91acb28d943994a1133cf13f2 379 PIRSF PIRSF000292 1 318 9.1E-128 T 31-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 DY252_08250 6dc2ada91acb28d943994a1133cf13f2 379 Pfam PF06481 COX Aromatic Rich Motif 246 289 9.8E-18 T 31-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 DY252_13070 2355db54e6649801837bed7566b85c01 248 Gene3D G3DSA:2.10.109.10 31 225 2.9E-61 T 31-10-2018 DY252_13070 2355db54e6649801837bed7566b85c01 248 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 18 226 9.7E-51 T 31-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DY252_13070 2355db54e6649801837bed7566b85c01 248 Gene3D G3DSA:2.170.230.10 114 181 2.9E-61 T 31-10-2018 DY252_13070 2355db54e6649801837bed7566b85c01 248 SUPERFAMILY SSF51306 31 245 2.41E-62 T 31-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DY252_13070 2355db54e6649801837bed7566b85c01 248 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 103 115 9.0E-26 T 31-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DY252_13070 2355db54e6649801837bed7566b85c01 248 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 182 201 9.0E-26 T 31-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DY252_13070 2355db54e6649801837bed7566b85c01 248 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 33 49 9.0E-26 T 31-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DY252_13070 2355db54e6649801837bed7566b85c01 248 ProSitePatterns PS00761 Signal peptidases I signature 3. 187 200 - T 31-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 DY252_13070 2355db54e6649801837bed7566b85c01 248 Pfam PF00717 Peptidase S24-like 40 127 1.1E-22 T 31-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DY252_13070 2355db54e6649801837bed7566b85c01 248 ProSitePatterns PS00760 Signal peptidases I lysine active site. 105 117 - T 31-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 DY252_13070 2355db54e6649801837bed7566b85c01 248 ProSitePatterns PS00501 Signal peptidases I serine active site. 42 49 - T 31-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 DY252_04840 b120f74f8b166e643112ad862257e6c9 157 TIGRFAM TIGR00077 lspA: signal peptidase II 5 155 4.7E-34 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_04840 b120f74f8b166e643112ad862257e6c9 157 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 4 155 16.178 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_04840 b120f74f8b166e643112ad862257e6c9 157 ProSitePatterns PS00855 Signal peptidases II signature. 97 109 - T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_04840 b120f74f8b166e643112ad862257e6c9 157 Pfam PF01252 Signal peptidase (SPase) II 13 150 3.9E-38 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_04840 b120f74f8b166e643112ad862257e6c9 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 130 146 5.8E-18 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_04840 b120f74f8b166e643112ad862257e6c9 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 94 109 5.8E-18 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_04840 b120f74f8b166e643112ad862257e6c9 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 51 59 5.8E-18 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_13850 f3eeb2566c3c1fdcebd6c2130a44a773 313 PIRSF PIRSF001439 1 313 3.0E-79 T 31-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 DY252_13850 f3eeb2566c3c1fdcebd6c2130a44a773 313 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 3 310 4.2E-68 T 31-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 DY252_13850 f3eeb2566c3c1fdcebd6c2130a44a773 313 SUPERFAMILY SSF51735 1 311 4.01E-94 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_13850 f3eeb2566c3c1fdcebd6c2130a44a773 313 Gene3D G3DSA:3.30.1780.10 4 310 3.0E-91 T 31-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 DY252_13850 f3eeb2566c3c1fdcebd6c2130a44a773 313 Gene3D G3DSA:3.40.50.720 122 295 3.0E-91 T 31-10-2018 DY252_15270 50efbbc9559d976a9e0b75f9833f32ee 512 Gene3D G3DSA:1.10.860.10 21 183 1.0E-43 T 31-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DY252_15270 50efbbc9559d976a9e0b75f9833f32ee 512 Pfam PF03796 DnaB-like helicase C terminal domain 207 502 7.6E-102 T 31-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 DY252_15270 50efbbc9559d976a9e0b75f9833f32ee 512 Gene3D G3DSA:3.40.50.300 189 511 2.6E-100 T 31-10-2018 DY252_15270 50efbbc9559d976a9e0b75f9833f32ee 512 SUPERFAMILY SSF48024 27 139 2.22E-33 T 31-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 DY252_15270 50efbbc9559d976a9e0b75f9833f32ee 512 SUPERFAMILY SSF52540 207 496 4.55E-46 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_15270 50efbbc9559d976a9e0b75f9833f32ee 512 Pfam PF00772 DnaB-like helicase N terminal domain 29 130 5.1E-30 T 31-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 DY252_15270 50efbbc9559d976a9e0b75f9833f32ee 512 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 29 505 2.6E-157 T 31-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 DY252_04050 028a39a5bbe527002fd826297ddc8f6d 186 Pfam PF04752 ChaC-like protein 8 175 6.1E-51 T 31-10-2018 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase GO:0003839|GO:0006751 KEGG: 00480+4.3.2.7|MetaCyc: PWY-7942|Reactome: R-HSA-174403 DY252_04050 028a39a5bbe527002fd826297ddc8f6d 186 SUPERFAMILY SSF110857 7 127 4.45E-14 T 31-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily DY252_04050 028a39a5bbe527002fd826297ddc8f6d 186 Gene3D G3DSA:3.10.490.10 2 179 4.0E-16 T 31-10-2018 DY252_04035 34974bcfc5c43412a339c2f889e098ca 365 Gene3D G3DSA:3.40.640.10 41 266 8.6E-103 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_04035 34974bcfc5c43412a339c2f889e098ca 365 Pfam PF00155 Aminotransferase class I and II 28 358 5.8E-55 T 31-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DY252_04035 34974bcfc5c43412a339c2f889e098ca 365 SUPERFAMILY SSF53383 10 362 4.35E-83 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_04035 34974bcfc5c43412a339c2f889e098ca 365 Gene3D G3DSA:3.90.1150.10 13 354 8.6E-103 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_04035 34974bcfc5c43412a339c2f889e098ca 365 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 7 361 5.2E-94 T 31-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DY252_04035 34974bcfc5c43412a339c2f889e098ca 365 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 5 363 55.994 T 31-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DY252_01910 036ebf29e5b9c6a414d48a6766da2c29 154 SUPERFAMILY SSF55804 1 146 2.22E-39 T 31-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DY252_01910 036ebf29e5b9c6a414d48a6766da2c29 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 4.2E-33 T 31-10-2018 IPR002178 PTS EIIA type-2 domain DY252_01910 036ebf29e5b9c6a414d48a6766da2c29 154 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 31-10-2018 IPR002178 PTS EIIA type-2 domain DY252_01910 036ebf29e5b9c6a414d48a6766da2c29 154 Gene3D G3DSA:3.40.930.10 1 153 4.4E-47 T 31-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DY252_01910 036ebf29e5b9c6a414d48a6766da2c29 154 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 3 146 7.5E-43 T 31-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 DY252_11085 78009253624f32580613f10ee91e41a4 404 Gene3D G3DSA:3.40.800.20 39 403 7.3E-98 T 31-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_11085 78009253624f32580613f10ee91e41a4 404 SUPERFAMILY SSF52768 44 396 4.12E-88 T 31-10-2018 IPR023696 Ureohydrolase domain superfamily DY252_11085 78009253624f32580613f10ee91e41a4 404 Pfam PF00850 Histone deacetylase domain 62 340 8.8E-56 T 31-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_11085 78009253624f32580613f10ee91e41a4 404 PRINTS PR01270 Histone deacetylase superfamily signature 276 286 1.0E-19 T 31-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_11085 78009253624f32580613f10ee91e41a4 404 PRINTS PR01270 Histone deacetylase superfamily signature 163 186 1.0E-19 T 31-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_11085 78009253624f32580613f10ee91e41a4 404 PRINTS PR01270 Histone deacetylase superfamily signature 196 211 1.0E-19 T 31-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_03100 154356b0b906c5e1fd696236eb99bc83 126 SUPERFAMILY SSF81343 4 122 2.62E-30 T 31-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_03100 154356b0b906c5e1fd696236eb99bc83 126 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 119 3.4E-28 T 31-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_03100 154356b0b906c5e1fd696236eb99bc83 126 PIRSF PIRSF000178 1 125 1.4E-34 T 31-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_03100 154356b0b906c5e1fd696236eb99bc83 126 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 81 94 - T 31-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_03100 154356b0b906c5e1fd696236eb99bc83 126 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 123 3.9E-35 T 31-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_03100 154356b0b906c5e1fd696236eb99bc83 126 Gene3D G3DSA:1.20.1300.10 1 124 5.8E-37 T 31-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_13140 e478f4da27738a4aa656bf05acf91d66 678 SUPERFAMILY SSF53955 523 662 8.28E-43 T 31-10-2018 IPR023346 Lysozyme-like domain superfamily DY252_13140 e478f4da27738a4aa656bf05acf91d66 678 Gene3D G3DSA:1.10.530.10 520 676 5.0E-47 T 31-10-2018 DY252_13140 e478f4da27738a4aa656bf05acf91d66 678 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 530 558 - T 31-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 DY252_13140 e478f4da27738a4aa656bf05acf91d66 678 Gene3D G3DSA:1.25.20.10 49 418 7.7E-11 T 31-10-2018 DY252_13140 e478f4da27738a4aa656bf05acf91d66 678 SUPERFAMILY SSF48435 52 498 1.14E-65 T 31-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 DY252_13140 e478f4da27738a4aa656bf05acf91d66 678 Pfam PF01464 Transglycosylase SLT domain 523 623 6.7E-28 T 31-10-2018 IPR008258 Transglycosylase SLT domain 1 DY252_18665 2f9c4148144cc764e0f538b34ba65349 246 Gene3D G3DSA:3.60.15.10 3 235 3.2E-24 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_18665 2f9c4148144cc764e0f538b34ba65349 246 Pfam PF12706 Beta-lactamase superfamily domain 24 215 9.0E-13 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_18665 2f9c4148144cc764e0f538b34ba65349 246 SUPERFAMILY SSF56281 21 216 5.71E-26 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_08660 e5f61f358d71de23637e2bc6b3b9d4ae 154 SUPERFAMILY SSF47175 32 154 1.3E-28 T 31-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 DY252_08660 e5f61f358d71de23637e2bc6b3b9d4ae 154 PIRSF PIRSF000027 12 154 2.1E-27 T 31-10-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 DY252_08660 e5f61f358d71de23637e2bc6b3b9d4ae 154 PRINTS PR00608 Class II cytochrome C signature 141 152 3.3E-9 T 31-10-2018 IPR015984 Cytochrome c prime, subgroup DY252_08660 e5f61f358d71de23637e2bc6b3b9d4ae 154 PRINTS PR00608 Class II cytochrome C signature 118 141 3.3E-9 T 31-10-2018 IPR015984 Cytochrome c prime, subgroup DY252_08660 e5f61f358d71de23637e2bc6b3b9d4ae 154 Pfam PF01322 Cytochrome C' 34 152 2.1E-23 T 31-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 DY252_08660 e5f61f358d71de23637e2bc6b3b9d4ae 154 Gene3D G3DSA:1.20.120.10 31 154 1.5E-29 T 31-10-2018 DY252_08930 3f72736dc68b3b7d41dd6cc13f2a4c46 125 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 125 1.3E-50 T 31-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_08930 3f72736dc68b3b7d41dd6cc13f2a4c46 125 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 1.2E-18 T 31-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_08930 3f72736dc68b3b7d41dd6cc13f2a4c46 125 SUPERFAMILY SSF48300 3 61 3.27E-16 T 31-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_08930 3f72736dc68b3b7d41dd6cc13f2a4c46 125 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 125 26.01 T 31-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_08930 3f72736dc68b3b7d41dd6cc13f2a4c46 125 Gene3D G3DSA:1.20.5.710 3 54 7.1E-19 T 31-10-2018 DY252_08930 3f72736dc68b3b7d41dd6cc13f2a4c46 125 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 59 125 4.6E-33 T 31-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_08930 3f72736dc68b3b7d41dd6cc13f2a4c46 125 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 61 102 1.0E-14 T 31-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_08930 3f72736dc68b3b7d41dd6cc13f2a4c46 125 Gene3D G3DSA:3.30.1390.10 55 125 1.7E-33 T 31-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DY252_08930 3f72736dc68b3b7d41dd6cc13f2a4c46 125 SUPERFAMILY SSF54736 54 125 5.06E-27 T 31-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DY252_19345 87656d0d4834a69585dca247a6a151e4 445 Pfam PF13458 Periplasmic binding protein 45 396 8.9E-56 T 31-10-2018 IPR028081 Leucine-binding protein domain DY252_19345 87656d0d4834a69585dca247a6a151e4 445 SUPERFAMILY SSF53822 44 402 4.95E-60 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_19345 87656d0d4834a69585dca247a6a151e4 445 Gene3D G3DSA:3.40.50.2300 66 388 2.0E-78 T 31-10-2018 DY252_19345 87656d0d4834a69585dca247a6a151e4 445 Gene3D G3DSA:3.40.50.2300 164 397 2.0E-78 T 31-10-2018 DY252_00655 07aff1ce028e3408ef0f289647f2762a 447 SUPERFAMILY SSF55205 14 441 1.07E-121 T 31-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DY252_00655 07aff1ce028e3408ef0f289647f2762a 447 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 20 440 8.8E-124 T 31-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DY252_00655 07aff1ce028e3408ef0f289647f2762a 447 Gene3D G3DSA:3.65.10.10 18 435 2.7E-139 T 31-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DY252_00655 07aff1ce028e3408ef0f289647f2762a 447 ProSitePatterns PS00885 EPSP synthase signature 2. 353 371 - T 31-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DY252_00655 07aff1ce028e3408ef0f289647f2762a 447 ProSitePatterns PS00104 EPSP synthase signature 1. 95 109 - T 31-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DY252_00655 07aff1ce028e3408ef0f289647f2762a 447 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 15 434 2.7E-101 T 31-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DY252_00655 07aff1ce028e3408ef0f289647f2762a 447 Gene3D G3DSA:3.65.10.10 28 242 2.7E-139 T 31-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DY252_00655 07aff1ce028e3408ef0f289647f2762a 447 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 16 442 31.214 T 31-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DY252_00655 07aff1ce028e3408ef0f289647f2762a 447 PIRSF PIRSF000505 7 446 4.1E-121 T 31-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DY252_09345 08a8ca81a475e70354d8c4d929704778 242 Pfam PF05988 Bacterial protein of unknown function (DUF899) 1 231 9.0E-90 T 31-10-2018 IPR010296 Protein of unknown function DUF899, thioredoxin-like DY252_09345 08a8ca81a475e70354d8c4d929704778 242 SUPERFAMILY SSF52833 49 156 9.66E-5 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 Gene3D G3DSA:3.30.565.10 1016 1175 2.2E-32 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 Gene3D G3DSA:3.40.50.2300 1183 1321 2.5E-17 T 31-10-2018 DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 SUPERFAMILY SSF55785 764 902 1.01E-17 T 31-10-2018 IPR035965 PAS domain superfamily DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 SMART SM00091 779 845 0.0081 T 31-10-2018 IPR000014 PAS domain DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 SMART SM00091 653 720 1.2 T 31-10-2018 IPR000014 PAS domain DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 SUPERFAMILY SSF52172 1189 1315 1.18E-18 T 31-10-2018 IPR011006 CheY-like superfamily DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 Pfam PF12860 PAS fold 659 772 6.3E-30 T 31-10-2018 DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 SUPERFAMILY SSF55874 1004 1169 1.7E-35 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 776 911 2.6E-12 T 31-10-2018 IPR000014 PAS domain DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 Gene3D G3DSA:1.10.287.130 936 1015 2.0E-11 T 31-10-2018 DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 SMART SM00388 949 1015 1.5E-6 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 SMART SM00387 1059 1170 1.3E-25 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 Gene3D G3DSA:3.30.450.20 776 917 3.9E-26 T 31-10-2018 DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 SUPERFAMILY SSF47384 933 1015 9.22E-11 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 Gene3D G3DSA:3.30.450.20 640 773 1.4E-12 T 31-10-2018 DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 Gene3D G3DSA:1.20.1730.10 36 483 8.0E-16 T 31-10-2018 IPR038377 Sodium/glucose symporter superfamily DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 SMART SM00448 1190 1309 2.5E-8 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 Pfam PF00512 His Kinase A (phospho-acceptor) domain 950 1015 1.4E-6 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 SUPERFAMILY SSF55785 665 775 5.58E-9 T 31-10-2018 IPR035965 PAS domain superfamily DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1060 1168 2.1E-19 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 Pfam PF08448 PAS fold 786 905 1.1E-13 T 31-10-2018 IPR013656 PAS fold-4 DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 Pfam PF00072 Response regulator receiver domain 1192 1308 1.7E-10 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1130 1148 5.5E-10 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1095 1109 5.5E-10 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_14355 2bdd608557128981a09ab2b4746d4e42 1322 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1154 1167 5.5E-10 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_06705 fa8a523e2fcbd37c0e352f306dfa95d6 291 Gene3D G3DSA:3.40.50.10490 102 283 3.4E-30 T 31-10-2018 DY252_06705 fa8a523e2fcbd37c0e352f306dfa95d6 291 Pfam PF01380 SIS domain 136 261 2.8E-17 T 31-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DY252_06705 fa8a523e2fcbd37c0e352f306dfa95d6 291 Gene3D G3DSA:1.10.10.10 1 79 2.4E-14 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_06705 fa8a523e2fcbd37c0e352f306dfa95d6 291 SUPERFAMILY SSF53697 106 264 6.88E-21 T 31-10-2018 DY252_06705 fa8a523e2fcbd37c0e352f306dfa95d6 291 SUPERFAMILY SSF46689 5 81 6.27E-15 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_06705 fa8a523e2fcbd37c0e352f306dfa95d6 291 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 72 1.9E-8 T 31-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DY252_06130 3e094d85fbfc091aab4ae47500d2c1b4 637 Gene3D G3DSA:3.40.1190.20 7 310 2.4E-91 T 31-10-2018 IPR029056 Ribokinase-like DY252_06130 3e094d85fbfc091aab4ae47500d2c1b4 637 Gene3D G3DSA:2.20.150.10 12 107 2.4E-91 T 31-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 DY252_06130 3e094d85fbfc091aab4ae47500d2c1b4 637 Pfam PF00294 pfkB family carbohydrate kinase 5 319 3.7E-43 T 31-10-2018 IPR011611 Carbohydrate kinase PfkB DY252_06130 3e094d85fbfc091aab4ae47500d2c1b4 637 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 31-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DY252_06130 3e094d85fbfc091aab4ae47500d2c1b4 637 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 4 327 8.4E-123 T 31-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 DY252_06130 3e094d85fbfc091aab4ae47500d2c1b4 637 SUPERFAMILY SSF53613 1 326 1.42E-70 T 31-10-2018 IPR029056 Ribokinase-like DY252_06130 3e094d85fbfc091aab4ae47500d2c1b4 637 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 272 285 - T 31-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DY252_06130 3e094d85fbfc091aab4ae47500d2c1b4 637 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 323 629 5.7E-126 T 31-10-2018 IPR018659 Protein of unknown function DUF2090 DY252_06130 3e094d85fbfc091aab4ae47500d2c1b4 637 Gene3D G3DSA:3.20.20.70 351 633 2.7E-51 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_15285 334f3d9c104c65c4f752ba8d3ae56eba 258 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_15285 334f3d9c104c65c4f752ba8d3ae56eba 258 Gene3D G3DSA:3.40.50.300 5 250 2.0E-65 T 31-10-2018 DY252_15285 334f3d9c104c65c4f752ba8d3ae56eba 258 SUPERFAMILY SSF52540 7 235 7.92E-62 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_15285 334f3d9c104c65c4f752ba8d3ae56eba 258 Pfam PF00005 ABC transporter 22 171 4.7E-32 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_15285 334f3d9c104c65c4f752ba8d3ae56eba 258 SMART SM00382 31 221 3.7E-14 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_05395 d585cab462582f265571d9db7621d472 321 Gene3D G3DSA:3.40.190.10 120 247 4.8E-55 T 31-10-2018 DY252_05395 d585cab462582f265571d9db7621d472 321 PIRSF PIRSF017082 1 321 1.6E-70 T 31-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DY252_05395 d585cab462582f265571d9db7621d472 321 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 43 318 3.2E-25 T 31-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DY252_05395 d585cab462582f265571d9db7621d472 321 SUPERFAMILY SSF53850 34 282 9.05E-12 T 31-10-2018 DY252_05395 d585cab462582f265571d9db7621d472 321 Gene3D G3DSA:3.40.190.150 29 312 4.8E-55 T 31-10-2018 DY252_00635 a19bc0aee45546eedccccb562f609a2e 91 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 2.2E-18 T 31-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DY252_00635 a19bc0aee45546eedccccb562f609a2e 91 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 2.2E-18 T 31-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DY252_00635 a19bc0aee45546eedccccb562f609a2e 91 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 2.2E-18 T 31-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DY252_00635 a19bc0aee45546eedccccb562f609a2e 91 SUPERFAMILY SSF47729 1 91 1.77E-30 T 31-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DY252_00635 a19bc0aee45546eedccccb562f609a2e 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 31-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DY252_00635 a19bc0aee45546eedccccb562f609a2e 91 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 9.5E-44 T 31-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 DY252_00635 a19bc0aee45546eedccccb562f609a2e 91 Pfam PF00216 Bacterial DNA-binding protein 1 91 7.5E-32 T 31-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DY252_00635 a19bc0aee45546eedccccb562f609a2e 91 Gene3D G3DSA:4.10.520.10 1 91 3.2E-34 T 31-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DY252_00635 a19bc0aee45546eedccccb562f609a2e 91 SMART SM00411 1 91 1.3E-43 T 31-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DY252_20555 e0caf90955d55926e3aec37e9accd461 231 SMART SM00382 33 216 1.8E-8 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_20555 e0caf90955d55926e3aec37e9accd461 231 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_20555 e0caf90955d55926e3aec37e9accd461 231 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 1 223 1.7E-100 T 31-10-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DY252_20555 e0caf90955d55926e3aec37e9accd461 231 Gene3D G3DSA:3.40.50.300 1 220 6.2E-46 T 31-10-2018 DY252_20555 e0caf90955d55926e3aec37e9accd461 231 Pfam PF00005 ABC transporter 25 178 4.9E-25 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_20555 e0caf90955d55926e3aec37e9accd461 231 SUPERFAMILY SSF52540 2 217 4.54E-41 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_00240 63255391f10d2542884617c9ccfa7634 268 SUPERFAMILY SSF46785 5 66 3.63E-13 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_00240 63255391f10d2542884617c9ccfa7634 268 SUPERFAMILY SSF100950 78 235 4.6E-28 T 31-10-2018 IPR037171 NagB/RpiA transferase-like DY252_00240 63255391f10d2542884617c9ccfa7634 268 SMART SM01134 77 236 2.6E-53 T 31-10-2018 DY252_00240 63255391f10d2542884617c9ccfa7634 268 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 31-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DY252_00240 63255391f10d2542884617c9ccfa7634 268 Pfam PF00455 DeoR C terminal sensor domain 79 234 1.9E-44 T 31-10-2018 IPR014036 DeoR C-terminal sensor domain DY252_00240 63255391f10d2542884617c9ccfa7634 268 Gene3D G3DSA:1.10.10.10 1 55 2.7E-6 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_00240 63255391f10d2542884617c9ccfa7634 268 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.9E-7 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_00240 63255391f10d2542884617c9ccfa7634 268 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.9E-7 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_00240 63255391f10d2542884617c9ccfa7634 268 SMART SM00420 6 58 1.0E-15 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_00240 63255391f10d2542884617c9ccfa7634 268 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 5.1E-15 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_02970 964bb80bee37e4055f34bd979551d82d 260 TIGRFAM TIGR02067 his_9_HisN: histidinol-phosphatase 8 255 1.1E-86 T 31-10-2018 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase GO:0004401 KEGG: 00340+3.1.3.15 DY252_02970 964bb80bee37e4055f34bd979551d82d 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 2.1E-19 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_02970 964bb80bee37e4055f34bd979551d82d 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 2.1E-19 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_02970 964bb80bee37e4055f34bd979551d82d 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 2.1E-19 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_02970 964bb80bee37e4055f34bd979551d82d 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 204 228 2.1E-19 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_02970 964bb80bee37e4055f34bd979551d82d 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 2.1E-19 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_02970 964bb80bee37e4055f34bd979551d82d 260 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 31-10-2018 IPR020583 Inositol monophosphatase, metal-binding site DY252_02970 964bb80bee37e4055f34bd979551d82d 260 Gene3D G3DSA:3.40.190.80 141 256 1.2E-29 T 31-10-2018 DY252_02970 964bb80bee37e4055f34bd979551d82d 260 SUPERFAMILY SSF56655 3 256 1.1E-71 T 31-10-2018 DY252_02970 964bb80bee37e4055f34bd979551d82d 260 Gene3D G3DSA:3.30.540.10 2 139 7.3E-43 T 31-10-2018 DY252_02970 964bb80bee37e4055f34bd979551d82d 260 Pfam PF00459 Inositol monophosphatase family 4 255 4.7E-52 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_20995 0fdadb8734a103af98138293202a6a90 180 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 1.9E-8 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_20995 0fdadb8734a103af98138293202a6a90 180 SUPERFAMILY SSF46689 10 76 6.16E-12 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_20995 0fdadb8734a103af98138293202a6a90 180 Gene3D G3DSA:1.10.357.10 6 179 4.1E-33 T 31-10-2018 DY252_20995 0fdadb8734a103af98138293202a6a90 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 3.5E-5 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_20995 0fdadb8734a103af98138293202a6a90 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 3.5E-5 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_04740 55c367a5166c070839fa5a9e8846187b 369 SUPERFAMILY SSF46689 290 344 7.47E-12 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_04740 55c367a5166c070839fa5a9e8846187b 369 Pfam PF12833 Helix-turn-helix domain 263 341 3.7E-18 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_04740 55c367a5166c070839fa5a9e8846187b 369 Pfam PF14525 AraC-binding-like domain 64 221 2.6E-11 T 31-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like DY252_04740 55c367a5166c070839fa5a9e8846187b 369 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 324 340 8.1E-6 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_04740 55c367a5166c070839fa5a9e8846187b 369 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 309 324 8.1E-6 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_04740 55c367a5166c070839fa5a9e8846187b 369 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 291 336 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_04740 55c367a5166c070839fa5a9e8846187b 369 SMART SM00342 256 340 3.0E-24 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_04740 55c367a5166c070839fa5a9e8846187b 369 Gene3D G3DSA:1.10.10.60 235 354 2.2E-25 T 31-10-2018 DY252_20460 b3c9910e2711971f460a64b484f19a73 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 352 374 9.3E-6 T 31-10-2018 DY252_20460 b3c9910e2711971f460a64b484f19a73 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 9.3E-6 T 31-10-2018 DY252_20460 b3c9910e2711971f460a64b484f19a73 399 SUPERFAMILY SSF51905 8 398 9.42E-57 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_20460 b3c9910e2711971f460a64b484f19a73 399 SUPERFAMILY SSF160996 197 345 7.59E-39 T 31-10-2018 DY252_20460 b3c9910e2711971f460a64b484f19a73 399 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 11 397 2.0E-126 T 31-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like DY252_20460 b3c9910e2711971f460a64b484f19a73 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 6.2E-8 T 31-10-2018 DY252_20460 b3c9910e2711971f460a64b484f19a73 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 367 374 6.2E-8 T 31-10-2018 DY252_20460 b3c9910e2711971f460a64b484f19a73 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 162 171 6.2E-8 T 31-10-2018 DY252_20460 b3c9910e2711971f460a64b484f19a73 399 Pfam PF03486 HI0933-like protein 10 397 1.3E-146 T 31-10-2018 DY252_20460 b3c9910e2711971f460a64b484f19a73 399 Gene3D G3DSA:1.10.8.260 268 327 9.4E-126 T 31-10-2018 IPR023166 HI0933-like insert domain superfamily DY252_20460 b3c9910e2711971f460a64b484f19a73 399 Gene3D G3DSA:3.50.50.60 11 396 9.4E-126 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_20460 b3c9910e2711971f460a64b484f19a73 399 Gene3D G3DSA:2.40.30.10 195 344 9.4E-126 T 31-10-2018 DY252_13005 e263204f12a7e7b620d8385203cc7667 406 SUPERFAMILY SSF55021 325 390 1.18E-6 T 31-10-2018 DY252_13005 e263204f12a7e7b620d8385203cc7667 406 Pfam PF13291 ACT domain 325 390 1.4E-6 T 31-10-2018 IPR002912 ACT domain DY252_13005 e263204f12a7e7b620d8385203cc7667 406 Gene3D G3DSA:3.40.50.1100 9 307 3.7E-113 T 31-10-2018 DY252_13005 e263204f12a7e7b620d8385203cc7667 406 Gene3D G3DSA:3.40.50.1100 51 147 3.7E-113 T 31-10-2018 DY252_13005 e263204f12a7e7b620d8385203cc7667 406 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 302 1.2E-79 T 31-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DY252_13005 e263204f12a7e7b620d8385203cc7667 406 SUPERFAMILY SSF53686 4 310 3.14E-94 T 31-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DY252_13005 e263204f12a7e7b620d8385203cc7667 406 Gene3D G3DSA:3.30.70.260 324 393 6.0E-6 T 31-10-2018 DY252_13005 e263204f12a7e7b620d8385203cc7667 406 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 22 395 7.1E-136 T 31-10-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DY252_02685 aa01a91cb742e03047b660813999d6d7 390 Gene3D G3DSA:1.10.287.470 110 183 2.4E-90 T 31-10-2018 DY252_02685 aa01a91cb742e03047b660813999d6d7 390 Gene3D G3DSA:2.40.50.100 75 220 2.4E-90 T 31-10-2018 DY252_02685 aa01a91cb742e03047b660813999d6d7 390 Gene3D G3DSA:2.40.420.20 312 380 2.4E-90 T 31-10-2018 DY252_02685 aa01a91cb742e03047b660813999d6d7 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 77 301 1.9E-14 T 31-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DY252_02685 aa01a91cb742e03047b660813999d6d7 390 Gene3D G3DSA:2.40.30.170 63 311 2.4E-90 T 31-10-2018 DY252_02685 aa01a91cb742e03047b660813999d6d7 390 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 51 382 6.1E-85 T 31-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DY252_02685 aa01a91cb742e03047b660813999d6d7 390 SUPERFAMILY SSF111369 65 305 3.53E-55 T 31-10-2018 DY252_13385 0b42e6b2154d74ebcd5355415fff87ac 244 SUPERFAMILY SSF52540 17 240 1.17E-66 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_13385 0b42e6b2154d74ebcd5355415fff87ac 244 SMART SM00382 46 242 1.3E-16 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_13385 0b42e6b2154d74ebcd5355415fff87ac 244 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_13385 0b42e6b2154d74ebcd5355415fff87ac 244 Pfam PF00005 ABC transporter 37 185 1.9E-30 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_13385 0b42e6b2154d74ebcd5355415fff87ac 244 Gene3D G3DSA:3.40.50.300 15 243 7.1E-62 T 31-10-2018 DY252_02320 ffb3075655231ed79981d02e2cf2dd4c 684 Gene3D G3DSA:2.40.170.20 182 684 9.8E-114 T 31-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DY252_02320 ffb3075655231ed79981d02e2cf2dd4c 684 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 54 684 4.9E-116 T 31-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 DY252_02320 ffb3075655231ed79981d02e2cf2dd4c 684 Gene3D G3DSA:2.170.130.10 64 181 3.2E-33 T 31-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DY252_02320 ffb3075655231ed79981d02e2cf2dd4c 684 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 171 3.2E-22 T 31-10-2018 IPR012910 TonB-dependent receptor, plug domain DY252_02320 ffb3075655231ed79981d02e2cf2dd4c 684 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 667 684 - T 31-10-2018 IPR010917 TonB-dependent receptor, conserved site DY252_02320 ffb3075655231ed79981d02e2cf2dd4c 684 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 61 - T 31-10-2018 IPR010916 TonB box, conserved site DY252_02320 ffb3075655231ed79981d02e2cf2dd4c 684 SUPERFAMILY SSF56935 54 684 9.16E-106 T 31-10-2018 DY252_02320 ffb3075655231ed79981d02e2cf2dd4c 684 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 53 684 1.6E-150 T 31-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 DY252_02320 ffb3075655231ed79981d02e2cf2dd4c 684 Pfam PF00593 TonB dependent receptor 264 683 5.6E-53 T 31-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DY252_06265 1ed7ecc994e65cef5bd0a3689f08bd5b 273 Gene3D G3DSA:3.40.190.10 112 224 1.0E-78 T 31-10-2018 DY252_06265 1ed7ecc994e65cef5bd0a3689f08bd5b 273 SUPERFAMILY SSF53850 33 262 2.4E-69 T 31-10-2018 DY252_06265 1ed7ecc994e65cef5bd0a3689f08bd5b 273 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 39 259 5.8E-59 T 31-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 DY252_06265 1ed7ecc994e65cef5bd0a3689f08bd5b 273 PIRSF PIRSF004846 3 264 3.1E-70 T 31-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 DY252_06265 1ed7ecc994e65cef5bd0a3689f08bd5b 273 Gene3D G3DSA:3.40.190.10 35 260 1.0E-78 T 31-10-2018 DY252_06265 1ed7ecc994e65cef5bd0a3689f08bd5b 273 Pfam PF13531 Bacterial extracellular solute-binding protein 34 261 5.9E-48 T 31-10-2018 DY252_05550 82072c25545d931abc126ea6d610bb3d 629 Gene3D G3DSA:3.90.580.10 1 99 1.1E-36 T 31-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 DY252_05550 82072c25545d931abc126ea6d610bb3d 629 Gene3D G3DSA:3.40.1360.10 239 366 6.1E-39 T 31-10-2018 DY252_05550 82072c25545d931abc126ea6d610bb3d 629 TIGRFAM TIGR01391 dnaG: DNA primase 3 414 9.7E-138 T 31-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 DY252_05550 82072c25545d931abc126ea6d610bb3d 629 SUPERFAMILY SSF57783 1 98 1.5E-35 T 31-10-2018 DY252_05550 82072c25545d931abc126ea6d610bb3d 629 PIRSF PIRSF002811 1 624 1.5E-141 T 31-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 DY252_05550 82072c25545d931abc126ea6d610bb3d 629 SUPERFAMILY SSF56731 111 418 1.28E-100 T 31-10-2018 DY252_05550 82072c25545d931abc126ea6d610bb3d 629 Pfam PF13662 Toprim domain 259 323 2.3E-18 T 31-10-2018 IPR006171 TOPRIM domain DY252_05550 82072c25545d931abc126ea6d610bb3d 629 Pfam PF01807 CHC2 zinc finger 4 97 1.8E-36 T 31-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DY252_05550 82072c25545d931abc126ea6d610bb3d 629 Hamap MF_00974 DNA primase [dnaG]. 2 614 26.395 T 31-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 DY252_05550 82072c25545d931abc126ea6d610bb3d 629 SMART SM00400 34 88 1.2E-35 T 31-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DY252_05550 82072c25545d931abc126ea6d610bb3d 629 Gene3D G3DSA:3.90.980.10 105 238 1.8E-43 T 31-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily DY252_05550 82072c25545d931abc126ea6d610bb3d 629 Pfam PF08275 DNA primase catalytic core, N-terminal domain 122 249 1.8E-40 T 31-10-2018 IPR013264 DNA primase, catalytic core, N-terminal DY252_05550 82072c25545d931abc126ea6d610bb3d 629 SMART SM00493 259 328 2.8E-9 T 31-10-2018 IPR006171 TOPRIM domain DY252_03970 8a95d241625178db4bb53cc04d2f934e 582 SUPERFAMILY SSF51735 402 532 1.76E-29 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_03970 8a95d241625178db4bb53cc04d2f934e 582 Gene3D G3DSA:1.20.1530.20 2 383 9.3E-80 T 31-10-2018 IPR038770 Sodium/solute symporter superfamily DY252_03970 8a95d241625178db4bb53cc04d2f934e 582 Pfam PF00999 Sodium/hydrogen exchanger family 10 371 4.1E-65 T 31-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DY252_03970 8a95d241625178db4bb53cc04d2f934e 582 Gene3D G3DSA:3.40.50.720 400 562 3.7E-36 T 31-10-2018 DY252_03970 8a95d241625178db4bb53cc04d2f934e 582 Pfam PF02254 TrkA-N domain 404 517 3.0E-23 T 31-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DY252_04315 df60c8e69e2eb4d5bb52cd05a4f750d3 291 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 7 283 2.8E-98 T 31-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 DY252_04315 df60c8e69e2eb4d5bb52cd05a4f750d3 291 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 59 81 - T 31-10-2018 IPR030470 UbiA prenyltransferase conserved site DY252_04315 df60c8e69e2eb4d5bb52cd05a4f750d3 291 Pfam PF01040 UbiA prenyltransferase family 22 266 1.4E-57 T 31-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DY252_04315 df60c8e69e2eb4d5bb52cd05a4f750d3 291 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 5 285 19.774 T 31-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 DY252_04315 df60c8e69e2eb4d5bb52cd05a4f750d3 291 Gene3D G3DSA:1.10.357.140 17 168 1.5E-18 T 31-10-2018 DY252_13900 f5b5359d2ee3a67567e892cc7a215762 407 Gene3D G3DSA:3.40.630.30 31 192 3.7E-29 T 31-10-2018 DY252_13900 f5b5359d2ee3a67567e892cc7a215762 407 Pfam PF11814 Peptidase_C39 like family 198 402 1.2E-82 T 31-10-2018 IPR021770 Protein of unknown function DUF3335 DY252_13900 f5b5359d2ee3a67567e892cc7a215762 407 SUPERFAMILY SSF55729 35 186 2.03E-28 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_13900 f5b5359d2ee3a67567e892cc7a215762 407 Pfam PF00583 Acetyltransferase (GNAT) family 54 163 4.4E-14 T 31-10-2018 IPR000182 GNAT domain DY252_06140 0cf2f85944236f9a79ecc04be2253622 301 SUPERFAMILY SSF51658 3 290 3.01E-51 T 31-10-2018 IPR036237 Xylose isomerase-like superfamily DY252_06140 0cf2f85944236f9a79ecc04be2253622 301 Gene3D G3DSA:3.20.20.150 1 290 3.2E-71 T 31-10-2018 DY252_06140 0cf2f85944236f9a79ecc04be2253622 301 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 2 289 1.8E-107 T 31-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 DY252_06140 0cf2f85944236f9a79ecc04be2253622 301 Pfam PF01261 Xylose isomerase-like TIM barrel 34 240 7.8E-25 T 31-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DY252_09365 f90d8699b1538f276d5a349fb0e2a678 104 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 6 82 2.2E-30 T 31-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 DY252_09365 f90d8699b1538f276d5a349fb0e2a678 104 SUPERFAMILY SSF47413 12 82 9.65E-23 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_09365 f90d8699b1538f276d5a349fb0e2a678 104 SMART SM00530 15 70 8.5E-7 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_09365 f90d8699b1538f276d5a349fb0e2a678 104 Pfam PF01381 Helix-turn-helix 19 68 7.7E-10 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_09365 f90d8699b1538f276d5a349fb0e2a678 104 Gene3D G3DSA:1.10.260.40 3 103 5.7E-30 T 31-10-2018 DY252_17590 ba079cbc576b65c9a8659aa418bcf2fd 803 SUPERFAMILY SSF64518 540 801 5.36E-14 T 31-10-2018 DY252_17590 ba079cbc576b65c9a8659aa418bcf2fd 803 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 324 2.5E-70 T 31-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DY252_17590 ba079cbc576b65c9a8659aa418bcf2fd 803 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 755 801 4.6E-11 T 31-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DY252_17590 ba079cbc576b65c9a8659aa418bcf2fd 803 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 31-10-2018 IPR019776 Flagellar basal body rod protein, conserved site DY252_17590 ba079cbc576b65c9a8659aa418bcf2fd 803 Pfam PF00460 Flagella basal body rod protein 7 36 3.9E-9 T 31-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DY252_01720 71d8ac49e0e392a293d50d3344e1a911 913 Pfam PF08335 GlnD PII-uridylyltransferase 209 347 2.2E-35 T 31-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 DY252_01720 71d8ac49e0e392a293d50d3344e1a911 913 Pfam PF01966 HD domain 508 619 1.3E-10 T 31-10-2018 IPR006674 HD domain DY252_01720 71d8ac49e0e392a293d50d3344e1a911 913 Gene3D G3DSA:1.10.3210.10 473 622 1.5E-9 T 31-10-2018 DY252_01720 71d8ac49e0e392a293d50d3344e1a911 913 SUPERFAMILY SSF55021 726 798 1.29E-11 T 31-10-2018 DY252_01720 71d8ac49e0e392a293d50d3344e1a911 913 Pfam PF01909 Nucleotidyltransferase domain 101 152 4.4E-5 T 31-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 DY252_01720 71d8ac49e0e392a293d50d3344e1a911 913 SUPERFAMILY SSF81301 36 202 1.15E-31 T 31-10-2018 DY252_01720 71d8ac49e0e392a293d50d3344e1a911 913 Gene3D G3DSA:3.30.70.260 726 802 4.6E-6 T 31-10-2018 DY252_01720 71d8ac49e0e392a293d50d3344e1a911 913 Gene3D G3DSA:3.30.70.260 835 911 2.5E-6 T 31-10-2018 DY252_01720 71d8ac49e0e392a293d50d3344e1a911 913 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 32 913 285.545 T 31-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 DY252_01720 71d8ac49e0e392a293d50d3344e1a911 913 PIRSF PIRSF006288 27 913 0.0 T 31-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 DY252_01720 71d8ac49e0e392a293d50d3344e1a911 913 SUPERFAMILY SSF81593 229 341 7.45E-9 T 31-10-2018 DY252_01720 71d8ac49e0e392a293d50d3344e1a911 913 SUPERFAMILY SSF55021 837 890 2.71E-11 T 31-10-2018 DY252_01720 71d8ac49e0e392a293d50d3344e1a911 913 SMART SM00471 484 631 8.4E-6 T 31-10-2018 IPR003607 HD/PDEase domain DY252_01720 71d8ac49e0e392a293d50d3344e1a911 913 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 51 910 1.0E-296 T 31-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 DY252_01720 71d8ac49e0e392a293d50d3344e1a911 913 SUPERFAMILY SSF81891 390 631 2.79E-22 T 31-10-2018 DY252_03795 fb4a3ee0d7aba2629e6bd538f3e3909e 253 Pfam PF00994 Probable molybdopterin binding domain 10 166 1.3E-31 T 31-10-2018 IPR001453 MoaB/Mog domain DY252_03795 fb4a3ee0d7aba2629e6bd538f3e3909e 253 SMART SM00852 9 171 7.4E-29 T 31-10-2018 IPR001453 MoaB/Mog domain DY252_03795 fb4a3ee0d7aba2629e6bd538f3e3909e 253 Gene3D G3DSA:3.40.980.10 6 169 5.9E-51 T 31-10-2018 IPR036425 MoaB/Mog-like domain superfamily DY252_03795 fb4a3ee0d7aba2629e6bd538f3e3909e 253 SUPERFAMILY SSF53218 5 199 1.7E-37 T 31-10-2018 IPR036425 MoaB/Mog-like domain superfamily DY252_08490 62caed1a98c6e0557c76953ba0cf2f76 68 PIRSF PIRSF002599 1 68 3.4E-21 T 31-10-2018 IPR012156 Cold shock, CspA GO:0003676 DY252_08490 62caed1a98c6e0557c76953ba0cf2f76 68 PRINTS PR00050 Cold shock protein signature 4 19 2.7E-16 T 31-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DY252_08490 62caed1a98c6e0557c76953ba0cf2f76 68 PRINTS PR00050 Cold shock protein signature 25 34 2.7E-16 T 31-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DY252_08490 62caed1a98c6e0557c76953ba0cf2f76 68 PRINTS PR00050 Cold shock protein signature 40 58 2.7E-16 T 31-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DY252_08490 62caed1a98c6e0557c76953ba0cf2f76 68 Gene3D G3DSA:2.40.50.140 1 65 4.2E-24 T 31-10-2018 DY252_08490 62caed1a98c6e0557c76953ba0cf2f76 68 SUPERFAMILY SSF50249 1 63 6.67E-22 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_08490 62caed1a98c6e0557c76953ba0cf2f76 68 SMART SM00357 3 68 1.9E-24 T 31-10-2018 IPR011129 Cold shock domain GO:0003676 DY252_08490 62caed1a98c6e0557c76953ba0cf2f76 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 1.8E-23 T 31-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DY252_09915 bb0d6bd722595716f819f3cd51e88718 566 Gene3D G3DSA:1.20.1480.50 179 275 4.1E-17 T 31-10-2018 DY252_09915 bb0d6bd722595716f819f3cd51e88718 566 SMART SM00304 216 269 6.9E-8 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_09915 bb0d6bd722595716f819f3cd51e88718 566 Gene3D G3DSA:1.10.287.950 276 566 9.9E-49 T 31-10-2018 DY252_09915 bb0d6bd722595716f819f3cd51e88718 566 SMART SM00283 306 560 4.0E-38 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_09915 bb0d6bd722595716f819f3cd51e88718 566 SUPERFAMILY SSF58104 245 556 6.67E-52 T 31-10-2018 DY252_09915 bb0d6bd722595716f819f3cd51e88718 566 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 102 4.8E-8 T 31-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DY252_09915 bb0d6bd722595716f819f3cd51e88718 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 431 4.3E-21 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_09915 bb0d6bd722595716f819f3cd51e88718 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 433 462 4.3E-21 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_09915 bb0d6bd722595716f819f3cd51e88718 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 19 44 4.3E-21 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_09915 bb0d6bd722595716f819f3cd51e88718 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 323 352 4.3E-21 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_09915 bb0d6bd722595716f819f3cd51e88718 566 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 365 526 7.4E-32 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_02035 72d93764f30b6be8d0dea6e3096d34ae 59 Gene3D G3DSA:2.60.260.40 4 54 4.4E-19 T 31-10-2018 DY252_02035 72d93764f30b6be8d0dea6e3096d34ae 59 Pfam PF10276 Zinc-finger domain 14 47 1.6E-16 T 31-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_17195 9272b7a97fcd2cb1cce494c31a3c0f71 344 Pfam PF16868 NMT1-like family 40 335 2.8E-89 T 31-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DY252_17195 9272b7a97fcd2cb1cce494c31a3c0f71 344 Gene3D G3DSA:3.40.190.10 128 272 3.9E-80 T 31-10-2018 DY252_17195 9272b7a97fcd2cb1cce494c31a3c0f71 344 SUPERFAMILY SSF53850 36 336 4.56E-55 T 31-10-2018 DY252_17195 9272b7a97fcd2cb1cce494c31a3c0f71 344 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 13 335 5.3E-82 T 31-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DY252_17195 9272b7a97fcd2cb1cce494c31a3c0f71 344 Gene3D G3DSA:3.40.190.10 40 335 3.9E-80 T 31-10-2018 DY252_18635 3208e697df347fdb6a813b0fc07f636a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 3.2E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_18635 3208e697df347fdb6a813b0fc07f636a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 3.2E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_18635 3208e697df347fdb6a813b0fc07f636a 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 3.2E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_18635 3208e697df347fdb6a813b0fc07f636a 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 4.1E-15 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_18635 3208e697df347fdb6a813b0fc07f636a 304 Pfam PF03466 LysR substrate binding domain 98 296 6.2E-27 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_18635 3208e697df347fdb6a813b0fc07f636a 304 Gene3D G3DSA:3.40.190.10 91 294 1.4E-60 T 31-10-2018 DY252_18635 3208e697df347fdb6a813b0fc07f636a 304 Gene3D G3DSA:1.10.10.10 1 90 8.7E-29 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_18635 3208e697df347fdb6a813b0fc07f636a 304 SUPERFAMILY SSF53850 91 295 5.58E-40 T 31-10-2018 DY252_18635 3208e697df347fdb6a813b0fc07f636a 304 Gene3D G3DSA:3.40.190.10 172 269 1.4E-60 T 31-10-2018 DY252_18635 3208e697df347fdb6a813b0fc07f636a 304 SUPERFAMILY SSF46785 5 86 3.96E-17 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_19220 f42ced51ab3942ab51338b0b50bbaa53 287 SUPERFAMILY SSF53850 45 238 1.58E-43 T 31-10-2018 DY252_19220 f42ced51ab3942ab51338b0b50bbaa53 287 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 34 270 3.0E-76 T 31-10-2018 DY252_19220 f42ced51ab3942ab51338b0b50bbaa53 287 Gene3D G3DSA:3.40.190.10 34 250 7.2E-68 T 31-10-2018 DY252_19220 f42ced51ab3942ab51338b0b50bbaa53 287 Gene3D G3DSA:3.40.190.10 115 223 7.2E-68 T 31-10-2018 DY252_19220 f42ced51ab3942ab51338b0b50bbaa53 287 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 1 248 8.0E-83 T 31-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 DY252_12620 c368cd688b23f93595d17f7bff5576c4 560 Pfam PF00672 HAMP domain 207 247 5.2E-7 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_12620 c368cd688b23f93595d17f7bff5576c4 560 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 354 508 7.9E-30 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_12620 c368cd688b23f93595d17f7bff5576c4 560 SUPERFAMILY SSF158472 207 255 2.35E-8 T 31-10-2018 DY252_12620 c368cd688b23f93595d17f7bff5576c4 560 Gene3D G3DSA:1.20.1480.50 166 265 9.4E-20 T 31-10-2018 DY252_12620 c368cd688b23f93595d17f7bff5576c4 560 SMART SM00304 207 260 2.4E-4 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_12620 c368cd688b23f93595d17f7bff5576c4 560 Gene3D G3DSA:1.10.287.950 266 560 3.3E-51 T 31-10-2018 DY252_12620 c368cd688b23f93595d17f7bff5576c4 560 SMART SM00283 285 550 5.7E-38 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_12620 c368cd688b23f93595d17f7bff5576c4 560 SUPERFAMILY SSF58104 279 549 4.97E-53 T 31-10-2018 DY252_13730 792e4585f0795cf61ec0a4dccaf3a86b 277 SUPERFAMILY SSF52499 25 218 1.31E-31 T 31-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DY252_13730 792e4585f0795cf61ec0a4dccaf3a86b 277 Gene3D G3DSA:3.40.50.850 15 240 2.3E-30 T 31-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DY252_13730 792e4585f0795cf61ec0a4dccaf3a86b 277 Pfam PF00857 Isochorismatase family 43 202 8.4E-25 T 31-10-2018 IPR000868 Isochorismatase-like GO:0003824 DY252_07445 75b5081fd6178865d2c052ea5a8ba416 300 Gene3D G3DSA:3.40.190.10 167 267 2.0E-44 T 31-10-2018 DY252_07445 75b5081fd6178865d2c052ea5a8ba416 300 Pfam PF03466 LysR substrate binding domain 90 292 3.5E-46 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_07445 75b5081fd6178865d2c052ea5a8ba416 300 Gene3D G3DSA:3.40.190.10 94 280 2.0E-44 T 31-10-2018 DY252_07445 75b5081fd6178865d2c052ea5a8ba416 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.3E-10 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_07445 75b5081fd6178865d2c052ea5a8ba416 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.3E-10 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_07445 75b5081fd6178865d2c052ea5a8ba416 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.3E-10 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_07445 75b5081fd6178865d2c052ea5a8ba416 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 6.8E-20 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_07445 75b5081fd6178865d2c052ea5a8ba416 300 Gene3D G3DSA:1.10.10.10 3 91 5.0E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_07445 75b5081fd6178865d2c052ea5a8ba416 300 SUPERFAMILY SSF53850 91 296 3.93E-44 T 31-10-2018 DY252_07445 75b5081fd6178865d2c052ea5a8ba416 300 SUPERFAMILY SSF46785 4 114 1.27E-22 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_16155 daf29b06c5185f5a3eb7a714c9a0b838 141 Gene3D G3DSA:3.10.129.10 4 140 6.2E-39 T 31-10-2018 DY252_16155 daf29b06c5185f5a3eb7a714c9a0b838 141 SUPERFAMILY SSF54637 12 132 8.3E-38 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_16155 daf29b06c5185f5a3eb7a714c9a0b838 141 Pfam PF03061 Thioesterase superfamily 31 102 2.6E-18 T 31-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DY252_15815 3e259931489b479822eda4d9d9cd2de9 301 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 256 7.5E-65 T 31-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 DY252_15815 3e259931489b479822eda4d9d9cd2de9 301 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 8 301 4.6E-160 T 31-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DY252_15815 3e259931489b479822eda4d9d9cd2de9 301 SUPERFAMILY SSF52402 1 209 5.42E-75 T 31-10-2018 DY252_15815 3e259931489b479822eda4d9d9cd2de9 301 PIRSF PIRSF002936 1 301 1.2E-155 T 31-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DY252_15815 3e259931489b479822eda4d9d9cd2de9 301 Gene3D G3DSA:3.40.50.620 6 211 1.7E-65 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_15815 3e259931489b479822eda4d9d9cd2de9 301 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 3 301 58.517 T 31-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DY252_14320 9946b6c1686a10f43db6367fb0b02b4d 879 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 876 0.0 T 31-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 DY252_14320 9946b6c1686a10f43db6367fb0b02b4d 879 SUPERFAMILY SSF63737 2 199 1.83E-43 T 31-10-2018 DY252_14320 9946b6c1686a10f43db6367fb0b02b4d 879 Gene3D G3DSA:1.10.390.10 286 449 1.7E-65 T 31-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily DY252_14320 9946b6c1686a10f43db6367fb0b02b4d 879 Gene3D G3DSA:1.10.1740.60 201 285 3.2E-41 T 31-10-2018 DY252_14320 9946b6c1686a10f43db6367fb0b02b4d 879 Pfam PF01433 Peptidase family M1 domain 214 441 1.2E-56 T 31-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DY252_14320 9946b6c1686a10f43db6367fb0b02b4d 879 Gene3D G3DSA:2.60.40.1840 450 542 6.3E-31 T 31-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily DY252_14320 9946b6c1686a10f43db6367fb0b02b4d 879 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 450 542 4.5E-30 T 31-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold DY252_14320 9946b6c1686a10f43db6367fb0b02b4d 879 Gene3D G3DSA:2.60.40.1730 15 200 2.3E-72 T 31-10-2018 DY252_14320 9946b6c1686a10f43db6367fb0b02b4d 879 SUPERFAMILY SSF55486 209 454 8.42E-74 T 31-10-2018 DY252_14320 9946b6c1686a10f43db6367fb0b02b4d 879 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 546 877 2.0E-124 T 31-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal DY252_14320 9946b6c1686a10f43db6367fb0b02b4d 879 Gene3D G3DSA:1.25.50.10 545 878 1.2E-120 T 31-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily DY252_14320 9946b6c1686a10f43db6367fb0b02b4d 879 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 300 315 5.1E-9 T 31-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DY252_14320 9946b6c1686a10f43db6367fb0b02b4d 879 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 264 274 5.1E-9 T 31-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DY252_14320 9946b6c1686a10f43db6367fb0b02b4d 879 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 182 197 5.1E-9 T 31-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DY252_14320 9946b6c1686a10f43db6367fb0b02b4d 879 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 331 5.1E-9 T 31-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DY252_14320 9946b6c1686a10f43db6367fb0b02b4d 879 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 132 147 5.1E-9 T 31-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DY252_08450 374605a90eecf766a29f58df90878898 307 Gene3D G3DSA:3.40.50.1820 75 269 1.5E-14 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_08450 374605a90eecf766a29f58df90878898 307 SUPERFAMILY SSF53474 81 261 4.66E-12 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_12635 d001ea806f7846bb70007057ebca9a5c 148 SUPERFAMILY SSF46626 67 146 4.12E-13 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_12635 d001ea806f7846bb70007057ebca9a5c 148 Gene3D G3DSA:1.10.760.10 72 147 4.9E-14 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_01790 dfe2e9404829366b482973c4e2a1f84c 336 Gene3D G3DSA:3.40.50.720 4 255 3.8E-123 T 31-10-2018 DY252_01790 dfe2e9404829366b482973c4e2a1f84c 336 SUPERFAMILY SSF51735 1 327 4.41E-96 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_01790 dfe2e9404829366b482973c4e2a1f84c 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 255 1.7E-59 T 31-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DY252_01790 dfe2e9404829366b482973c4e2a1f84c 336 Gene3D G3DSA:3.90.25.10 174 308 3.8E-123 T 31-10-2018 DY252_01790 dfe2e9404829366b482973c4e2a1f84c 336 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 328 3.4E-122 T 31-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 DY252_19315 f6db8b8a050206670c3dbeab96ea02dc 320 Pfam PF04198 Putative sugar-binding domain 62 311 7.4E-59 T 31-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 DY252_19315 f6db8b8a050206670c3dbeab96ea02dc 320 Pfam PF13412 Winged helix-turn-helix DNA-binding 24 55 4.7E-5 T 31-10-2018 DY252_19315 f6db8b8a050206670c3dbeab96ea02dc 320 SUPERFAMILY SSF100950 65 312 1.6E-60 T 31-10-2018 IPR037171 NagB/RpiA transferase-like DY252_19315 f6db8b8a050206670c3dbeab96ea02dc 320 Gene3D G3DSA:3.40.50.1360 55 312 1.0E-69 T 31-10-2018 DY252_19315 f6db8b8a050206670c3dbeab96ea02dc 320 Gene3D G3DSA:1.10.10.60 5 54 1.1E-12 T 31-10-2018 DY252_03175 c9c190b3ebadaf464fa015a0da929e59 359 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 337 7.0E-47 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_00055 a8332f45e3bf3803e88cb008b4d285fb 325 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 305 6.5E-74 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_00055 a8332f45e3bf3803e88cb008b4d285fb 325 Gene3D G3DSA:3.40.190.170 18 325 1.8E-94 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_00055 a8332f45e3bf3803e88cb008b4d285fb 325 PIRSF PIRSF006470 1 323 4.3E-80 T 31-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DY252_00055 a8332f45e3bf3803e88cb008b4d285fb 325 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 34 287 6.2E-64 T 31-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DY252_01430 315308e190aadc537800aa1de190c19e 485 SUPERFAMILY SSF56300 97 413 3.32E-9 T 31-10-2018 DY252_01430 315308e190aadc537800aa1de190c19e 485 Pfam PF09423 PhoD-like phosphatase 133 246 2.5E-8 T 31-10-2018 IPR018946 Alkaline phosphatase D-related DY252_01430 315308e190aadc537800aa1de190c19e 485 Gene3D G3DSA:3.60.21.70 96 473 4.2E-8 T 31-10-2018 IPR038607 PhoD-like superfamily DY252_19180 f33e9b9c0e775ee36620b42fbab295f8 350 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 39 324 7.9E-44 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_19180 f33e9b9c0e775ee36620b42fbab295f8 350 Gene3D G3DSA:3.40.190.170 32 348 6.8E-89 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_20620 052085d6dd1f0755e0aa591df1429e5b 529 Gene3D G3DSA:3.40.190.10 208 508 4.6E-90 T 31-10-2018 DY252_20620 052085d6dd1f0755e0aa591df1429e5b 529 SUPERFAMILY SSF53850 46 511 1.02E-109 T 31-10-2018 DY252_20620 052085d6dd1f0755e0aa591df1429e5b 529 Gene3D G3DSA:3.10.105.10 283 498 4.6E-90 T 31-10-2018 DY252_20620 052085d6dd1f0755e0aa591df1429e5b 529 Gene3D G3DSA:3.90.76.10 66 207 4.6E-90 T 31-10-2018 DY252_20620 052085d6dd1f0755e0aa591df1429e5b 529 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 100 447 1.3E-68 T 31-10-2018 IPR000914 Solute-binding protein family 5 domain DY252_20620 052085d6dd1f0755e0aa591df1429e5b 529 PIRSF PIRSF002741 14 513 8.0E-63 T 31-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DY252_15570 e6bf8321004b2f7d78685262d29a30ca 582 SUPERFAMILY SSF143975 19 383 4.71E-125 T 31-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DY252_15570 e6bf8321004b2f7d78685262d29a30ca 582 SUPERFAMILY SSF52016 384 570 2.82E-56 T 31-10-2018 DY252_15570 e6bf8321004b2f7d78685262d29a30ca 582 Pfam PF00920 Dehydratase family 47 564 8.4E-181 T 31-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DY252_15570 e6bf8321004b2f7d78685262d29a30ca 582 Gene3D G3DSA:3.50.30.80 384 538 3.3E-47 T 31-10-2018 DY252_15210 1d32f0f0a9332b44502b1c319acb6948 210 Gene3D G3DSA:3.40.50.300 3 42 2.9E-5 T 31-10-2018 DY252_15210 1d32f0f0a9332b44502b1c319acb6948 210 Gene3D G3DSA:3.40.50.300 95 209 4.7E-35 T 31-10-2018 DY252_15210 1d32f0f0a9332b44502b1c319acb6948 210 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 10 187 2.2E-72 T 31-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 DY252_15210 1d32f0f0a9332b44502b1c319acb6948 210 Hamap MF_00328 Guanylate kinase [gmk]. 7 191 37.127 T 31-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 DY252_15210 1d32f0f0a9332b44502b1c319acb6948 210 Gene3D G3DSA:3.30.63.10 43 94 4.8E-25 T 31-10-2018 DY252_15210 1d32f0f0a9332b44502b1c319acb6948 210 ProSitePatterns PS00856 Guanylate kinase-like signature. 43 60 - T 31-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 DY252_15210 1d32f0f0a9332b44502b1c319acb6948 210 SMART SM00072 8 191 7.5E-64 T 31-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DY252_15210 1d32f0f0a9332b44502b1c319acb6948 210 Pfam PF00625 Guanylate kinase 12 189 1.8E-49 T 31-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DY252_15210 1d32f0f0a9332b44502b1c319acb6948 210 SUPERFAMILY SSF52540 6 193 6.75E-67 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_16755 9f28554cebd8d778506cd58bbb0c6dd8 145 Pfam PF09335 SNARE associated Golgi protein 25 131 8.7E-14 T 31-10-2018 IPR032816 SNARE associated Golgi protein DY252_17080 b378b05e5348501054ce3491543e6b71 242 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 20 230 37.827 T 31-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 DY252_17080 b378b05e5348501054ce3491543e6b71 242 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 31 229 1.2E-58 T 31-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 DY252_17080 b378b05e5348501054ce3491543e6b71 242 Pfam PF02666 Phosphatidylserine decarboxylase 54 226 3.0E-32 T 31-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 DY252_20935 85601c3581471de0a7855813835d1918 450 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 37 254 1.2E-55 T 31-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 DY252_20935 85601c3581471de0a7855813835d1918 450 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 3 323 5.7E-62 T 31-10-2018 IPR014150 Conjugal transfer, TrbL DY252_14510 040b32ab1a1d51ed108e6a6b5b1e9ada 289 SUPERFAMILY SSF46785 1 111 4.69E-16 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_14510 040b32ab1a1d51ed108e6a6b5b1e9ada 289 Pfam PF03466 LysR substrate binding domain 90 275 3.9E-24 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_14510 040b32ab1a1d51ed108e6a6b5b1e9ada 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.4E-14 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_14510 040b32ab1a1d51ed108e6a6b5b1e9ada 289 SUPERFAMILY SSF53850 90 280 5.43E-30 T 31-10-2018 DY252_14510 040b32ab1a1d51ed108e6a6b5b1e9ada 289 Gene3D G3DSA:1.10.10.10 1 92 1.9E-14 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_14510 040b32ab1a1d51ed108e6a6b5b1e9ada 289 Gene3D G3DSA:3.40.190.290 93 277 4.4E-27 T 31-10-2018 DY252_18265 f69917b512035ca1047ffc79d46185ed 558 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 26 372 5.2E-120 T 31-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 DY252_18265 f69917b512035ca1047ffc79d46185ed 558 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 22 504 27.539 T 31-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 DY252_18265 f69917b512035ca1047ffc79d46185ed 558 Pfam PF13742 OB-fold nucleic acid binding domain 25 118 1.6E-26 T 31-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 DY252_18265 f69917b512035ca1047ffc79d46185ed 558 Pfam PF02601 Exonuclease VII, large subunit 141 366 1.0E-78 T 31-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 DY252_18265 f69917b512035ca1047ffc79d46185ed 558 Pfam PF02601 Exonuclease VII, large subunit 342 498 1.3E-16 T 31-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 DY252_02905 e142655321a50ceef3082d02d58a229c 198 SUPERFAMILY SSF52141 7 195 1.67E-54 T 31-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DY252_02905 e142655321a50ceef3082d02d58a229c 198 Pfam PF03167 Uracil DNA glycosylase superfamily 36 186 6.2E-22 T 31-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DY252_02905 e142655321a50ceef3082d02d58a229c 198 Gene3D G3DSA:3.40.470.10 3 198 5.3E-68 T 31-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DY252_02905 e142655321a50ceef3082d02d58a229c 198 SMART SM00986 31 190 8.1E-30 T 31-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DY252_02905 e142655321a50ceef3082d02d58a229c 198 SMART SM00987 31 190 8.1E-30 T 31-10-2018 DY252_13395 59f51babac198dba8c303e24b52d319d 441 Hamap MF_01570 Proline--tRNA ligase [proS]. 1 441 61.757 T 31-10-2018 IPR023716 Proline-tRNA ligase, class IIa, type 2 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DY252_13395 59f51babac198dba8c303e24b52d319d 441 Gene3D G3DSA:3.40.50.800 335 441 2.0E-30 T 31-10-2018 IPR036621 Anticodon-binding domain superfamily DY252_13395 59f51babac198dba8c303e24b52d319d 441 SUPERFAMILY SSF52954 337 439 3.78E-30 T 31-10-2018 DY252_13395 59f51babac198dba8c303e24b52d319d 441 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 331 1.8E-36 T 31-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_13395 59f51babac198dba8c303e24b52d319d 441 Gene3D G3DSA:3.30.930.10 1 334 1.6E-113 T 31-10-2018 DY252_13395 59f51babac198dba8c303e24b52d319d 441 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 223 2.3E-97 T 31-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DY252_13395 59f51babac198dba8c303e24b52d319d 441 SUPERFAMILY SSF55681 9 351 7.88E-95 T 31-10-2018 DY252_13395 59f51babac198dba8c303e24b52d319d 441 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 9.0E-16 T 31-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DY252_13395 59f51babac198dba8c303e24b52d319d 441 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 9.0E-16 T 31-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DY252_13395 59f51babac198dba8c303e24b52d319d 441 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 9.0E-16 T 31-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DY252_13395 59f51babac198dba8c303e24b52d319d 441 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 9.0E-16 T 31-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DY252_13395 59f51babac198dba8c303e24b52d319d 441 Pfam PF03129 Anticodon binding domain 349 439 3.5E-18 T 31-10-2018 IPR004154 Anticodon-binding DY252_13575 9d0eef8077f513643f7d3bdda5688496 152 Gene3D G3DSA:1.10.760.10 24 139 7.2E-16 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_13575 9d0eef8077f513643f7d3bdda5688496 152 PRINTS PR00605 Class IC cytochrome C signature 48 59 7.2E-5 T 31-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 DY252_13575 9d0eef8077f513643f7d3bdda5688496 152 PRINTS PR00605 Class IC cytochrome C signature 109 131 7.2E-5 T 31-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 DY252_13575 9d0eef8077f513643f7d3bdda5688496 152 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 38 131 2.9E-10 T 31-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_13575 9d0eef8077f513643f7d3bdda5688496 152 SUPERFAMILY SSF46626 31 138 1.0E-18 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_14050 b3b8d856ef61d7f3e7c54a577b361209 442 Pfam PF03773 Predicted permease 47 437 1.7E-73 T 31-10-2018 IPR005524 Predicted permease DUF318 DY252_16970 aff3a8c921b8e07f564029bab9ac7d3e 271 Gene3D G3DSA:3.40.190.10 105 200 3.7E-15 T 31-10-2018 DY252_16970 aff3a8c921b8e07f564029bab9ac7d3e 271 SMART SM00062 26 256 3.2E-5 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_16970 aff3a8c921b8e07f564029bab9ac7d3e 271 Gene3D G3DSA:3.40.190.10 41 236 3.7E-15 T 31-10-2018 DY252_16970 aff3a8c921b8e07f564029bab9ac7d3e 271 SUPERFAMILY SSF53850 25 239 8.2E-23 T 31-10-2018 DY252_16970 aff3a8c921b8e07f564029bab9ac7d3e 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 236 9.0E-11 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_03060 c7c99926210ace05c9d0d040f3412407 82 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 81 9.3E-16 T 31-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 DY252_03060 c7c99926210ace05c9d0d040f3412407 82 Pfam PF06667 Phage shock protein B 3 80 5.5E-19 T 31-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 DY252_08970 da1f7734aac5515af3219f740c4d3303 238 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 36.669 T 31-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_08970 da1f7734aac5515af3219f740c4d3303 238 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 2.3E-86 T 31-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_08970 da1f7734aac5515af3219f740c4d3303 238 Gene3D G3DSA:2.40.30.10 130 211 1.6E-16 T 31-10-2018 DY252_08970 da1f7734aac5515af3219f740c4d3303 238 Gene3D G3DSA:2.40.50.620 32 97 1.8E-29 T 31-10-2018 DY252_08970 da1f7734aac5515af3219f740c4d3303 238 Pfam PF00297 Ribosomal protein L3 95 179 4.7E-12 T 31-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_08970 da1f7734aac5515af3219f740c4d3303 238 SUPERFAMILY SSF50447 1 213 5.03E-81 T 31-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DY252_08970 da1f7734aac5515af3219f740c4d3303 238 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 31-10-2018 IPR019926 Ribosomal protein L3, conserved site DY252_12445 4e9879b90a84109ee38085b4c397fe55 257 SUPERFAMILY SSF56281 3 256 4.7E-46 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_12445 4e9879b90a84109ee38085b4c397fe55 257 Pfam PF12706 Beta-lactamase superfamily domain 47 228 4.5E-32 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_12445 4e9879b90a84109ee38085b4c397fe55 257 SMART SM00849 35 227 4.5E-4 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_12445 4e9879b90a84109ee38085b4c397fe55 257 Gene3D G3DSA:3.60.15.10 1 257 1.1E-69 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_09560 ac52d22fc980ceb556fface3bc888687 293 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 212 224 - T 31-10-2018 IPR033749 Polyprenyl synthetase, conserved site DY252_09560 ac52d22fc980ceb556fface3bc888687 293 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 31-10-2018 IPR033749 Polyprenyl synthetase, conserved site DY252_09560 ac52d22fc980ceb556fface3bc888687 293 SUPERFAMILY SSF48576 21 285 4.8E-83 T 31-10-2018 IPR008949 Isoprenoid synthase domain superfamily DY252_09560 ac52d22fc980ceb556fface3bc888687 293 Pfam PF00348 Polyprenyl synthetase 29 268 7.9E-56 T 31-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 DY252_09560 ac52d22fc980ceb556fface3bc888687 293 Gene3D G3DSA:1.10.600.10 3 293 4.9E-98 T 31-10-2018 IPR008949 Isoprenoid synthase domain superfamily DY252_07055 87bbf5dab2232d5172a0ef533198e098 79 SUPERFAMILY SSF82697 2 77 1.22E-31 T 31-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DY252_07055 87bbf5dab2232d5172a0ef533198e098 79 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 2 78 3.5E-36 T 31-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DY252_07055 87bbf5dab2232d5172a0ef533198e098 79 Gene3D G3DSA:3.30.1280.10 1 79 1.2E-34 T 31-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DY252_07055 87bbf5dab2232d5172a0ef533198e098 79 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 2 78 1.1E-32 T 31-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DY252_07055 87bbf5dab2232d5172a0ef533198e098 79 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 78 23.742 T 31-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DY252_07055 87bbf5dab2232d5172a0ef533198e098 79 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 78 1.0E-23 T 31-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DY252_01840 07de90f150176fc012bc8f4671d22509 199 Pfam PF01725 Ham1 family 10 194 1.9E-54 T 31-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 DY252_01840 07de90f150176fc012bc8f4671d22509 199 SUPERFAMILY SSF52972 5 196 1.18E-67 T 31-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DY252_01840 07de90f150176fc012bc8f4671d22509 199 Hamap MF_01405 dITP/XTP pyrophosphatase. 8 198 44.718 T 31-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 DY252_01840 07de90f150176fc012bc8f4671d22509 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 9 195 8.7E-52 T 31-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 DY252_01840 07de90f150176fc012bc8f4671d22509 199 Gene3D G3DSA:3.90.950.10 5 198 6.7E-68 T 31-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DY252_21050 bd8682d8e01faab5936e9530b36468a2 254 Gene3D G3DSA:1.10.530.10 41 176 3.7E-37 T 31-10-2018 DY252_21050 bd8682d8e01faab5936e9530b36468a2 254 SUPERFAMILY SSF53955 27 174 4.3E-41 T 31-10-2018 IPR023346 Lysozyme-like domain superfamily DY252_21050 bd8682d8e01faab5936e9530b36468a2 254 Pfam PF01464 Transglycosylase SLT domain 58 156 6.7E-24 T 31-10-2018 IPR008258 Transglycosylase SLT domain 1 DY252_17395 3d21ac752565b2c76b1aa61309754118 241 SUPERFAMILY SSF53850 58 230 6.39E-12 T 31-10-2018 DY252_17395 3d21ac752565b2c76b1aa61309754118 241 Gene3D G3DSA:3.40.190.10 64 224 2.0E-7 T 31-10-2018 DY252_17395 3d21ac752565b2c76b1aa61309754118 241 Gene3D G3DSA:3.40.190.10 112 206 2.0E-7 T 31-10-2018 DY252_08915 08d1f9558617a467b9caefa55823303d 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.3E-23 T 31-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 DY252_08915 08d1f9558617a467b9caefa55823303d 142 SUPERFAMILY SSF54747 3 73 3.27E-31 T 31-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DY252_08915 08d1f9558617a467b9caefa55823303d 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 3.0E-15 T 31-10-2018 DY252_08915 08d1f9558617a467b9caefa55823303d 142 SMART SM00649 9 141 2.8E-80 T 31-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 DY252_08915 08d1f9558617a467b9caefa55823303d 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.217 T 31-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 DY252_08915 08d1f9558617a467b9caefa55823303d 142 Gene3D G3DSA:3.30.1550.10 2 72 1.0E-36 T 31-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DY252_08915 08d1f9558617a467b9caefa55823303d 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 3.9E-65 T 31-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_08915 08d1f9558617a467b9caefa55823303d 142 SUPERFAMILY SSF46906 68 140 5.89E-25 T 31-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DY252_08915 08d1f9558617a467b9caefa55823303d 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 67 3.7E-31 T 31-10-2018 IPR020784 Ribosomal protein L11, N-terminal DY252_08915 08d1f9558617a467b9caefa55823303d 142 Gene3D G3DSA:1.10.10.2720 73 142 3.5E-27 T 31-10-2018 DY252_00065 3173d314deece201e545e0560bd3848c 405 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 397 6.8E-121 T 31-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DY252_00065 3173d314deece201e545e0560bd3848c 405 PIRSF PIRSF016049 1 402 5.6E-155 T 31-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DY252_00065 3173d314deece201e545e0560bd3848c 405 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 398 1.3E-141 T 31-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DY252_00065 3173d314deece201e545e0560bd3848c 405 SUPERFAMILY SSF51658 1 394 7.93E-68 T 31-10-2018 IPR036237 Xylose isomerase-like superfamily DY252_00065 3173d314deece201e545e0560bd3848c 405 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 405 182.119 T 31-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DY252_18395 d82132bfdfb8f6955407011702d30e6f 415 SMART SM00729 131 350 1.2E-55 T 31-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DY252_18395 d82132bfdfb8f6955407011702d30e6f 415 Gene3D G3DSA:3.40.50.12160 4 122 1.4E-15 T 31-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily DY252_18395 d82132bfdfb8f6955407011702d30e6f 415 SUPERFAMILY SSF102114 110 350 8.11E-53 T 31-10-2018 DY252_18395 d82132bfdfb8f6955407011702d30e6f 415 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 410 1.2E-106 T 31-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 DY252_18395 d82132bfdfb8f6955407011702d30e6f 415 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 135 155 - T 31-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 DY252_18395 d82132bfdfb8f6955407011702d30e6f 415 Pfam PF04055 Radical SAM superfamily 136 308 2.4E-26 T 31-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DY252_18395 d82132bfdfb8f6955407011702d30e6f 415 Gene3D G3DSA:3.80.30.20 128 360 1.9E-71 T 31-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DY252_18395 d82132bfdfb8f6955407011702d30e6f 415 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 7 385 2.7E-135 T 31-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 DY252_18395 d82132bfdfb8f6955407011702d30e6f 415 Pfam PF00919 Uncharacterized protein family UPF0004 6 90 9.2E-17 T 31-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 DY252_05485 68b475f498c1aa4268b503a0bf73205a 344 SUPERFAMILY SSF53850 139 263 2.9E-5 T 31-10-2018 DY252_05485 68b475f498c1aa4268b503a0bf73205a 344 Gene3D G3DSA:3.40.190.170 28 344 3.6E-92 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_05485 68b475f498c1aa4268b503a0bf73205a 344 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 34 317 1.7E-45 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_08550 4289fb2a5b09e5914329bb326f4ecfa4 224 SUPERFAMILY SSF53335 24 194 1.08E-25 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_08550 4289fb2a5b09e5914329bb326f4ecfa4 224 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 47 192 4.8E-20 T 31-10-2018 IPR006342 Methyltransferase FkbM DY252_08550 4289fb2a5b09e5914329bb326f4ecfa4 224 Pfam PF05050 Methyltransferase FkbM domain 49 216 1.3E-11 T 31-10-2018 IPR006342 Methyltransferase FkbM DY252_08550 4289fb2a5b09e5914329bb326f4ecfa4 224 Gene3D G3DSA:3.40.50.150 33 219 8.7E-23 T 31-10-2018 DY252_17835 3a1b70fa331f83ffb30fb3400b7d4941 111 Gene3D G3DSA:3.40.30.10 9 104 2.0E-33 T 31-10-2018 DY252_17835 3a1b70fa331f83ffb30fb3400b7d4941 111 Pfam PF00462 Glutaredoxin 19 82 3.9E-19 T 31-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DY252_17835 3a1b70fa331f83ffb30fb3400b7d4941 111 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 7 103 4.2E-46 T 31-10-2018 IPR004480 Monothiol glutaredoxin-related DY252_17835 3a1b70fa331f83ffb30fb3400b7d4941 111 SUPERFAMILY SSF52833 6 107 1.09E-34 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_17835 3a1b70fa331f83ffb30fb3400b7d4941 111 PIRSF PIRSF005894 1 110 1.0E-48 T 31-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 DY252_08585 ea791461764eae3c2f5822e0e534d694 144 SMART SM00418 61 139 1.1E-20 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_08585 ea791461764eae3c2f5822e0e534d694 144 Gene3D G3DSA:1.10.10.10 40 144 2.6E-24 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_08585 ea791461764eae3c2f5822e0e534d694 144 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 95 110 1.8E-8 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_08585 ea791461764eae3c2f5822e0e534d694 144 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 1.8E-8 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_08585 ea791461764eae3c2f5822e0e534d694 144 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 110 125 1.8E-8 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_08585 ea791461764eae3c2f5822e0e534d694 144 SUPERFAMILY SSF46785 54 140 2.62E-21 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_08585 ea791461764eae3c2f5822e0e534d694 144 Pfam PF01022 Bacterial regulatory protein, arsR family 69 112 3.8E-11 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_19610 21fc53a5609060509bcd1628a8db5abe 315 Pfam PF13410 Glutathione S-transferase, C-terminal domain 197 265 3.6E-13 T 31-10-2018 DY252_19610 21fc53a5609060509bcd1628a8db5abe 315 SUPERFAMILY SSF52833 31 155 1.26E-19 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_19610 21fc53a5609060509bcd1628a8db5abe 315 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 150 1.8E-24 T 31-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DY252_19610 21fc53a5609060509bcd1628a8db5abe 315 SUPERFAMILY SSF47616 163 315 4.59E-38 T 31-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DY252_19610 21fc53a5609060509bcd1628a8db5abe 315 Gene3D G3DSA:3.40.30.130 21 309 3.4E-141 T 31-10-2018 DY252_19610 21fc53a5609060509bcd1628a8db5abe 315 PIRSF PIRSF015753 5 315 3.0E-142 T 31-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 DY252_19610 21fc53a5609060509bcd1628a8db5abe 315 Gene3D G3DSA:1.20.1050.10 166 276 3.4E-141 T 31-10-2018 DY252_07545 101dac886daa2d33ec5083b55a43f08b 280 Gene3D G3DSA:1.10.3720.10 17 277 2.7E-67 T 31-10-2018 IPR035906 MetI-like superfamily DY252_07545 101dac886daa2d33ec5083b55a43f08b 280 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 10 271 1.4E-88 T 31-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 DY252_07545 101dac886daa2d33ec5083b55a43f08b 280 SUPERFAMILY SSF161098 20 270 3.36E-54 T 31-10-2018 IPR035906 MetI-like superfamily DY252_07545 101dac886daa2d33ec5083b55a43f08b 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 277 3.2E-23 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_07545 101dac886daa2d33ec5083b55a43f08b 280 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 13 276 6.0E-119 T 31-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 DY252_07415 1c6038132d404ed7e33296dae7094c0e 368 Pfam PF00365 Phosphofructokinase 2 307 3.8E-94 T 31-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DY252_07415 1c6038132d404ed7e33296dae7094c0e 368 ProSitePatterns PS00433 Phosphofructokinase signature. 275 293 - T 31-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DY252_07415 1c6038132d404ed7e33296dae7094c0e 368 Gene3D G3DSA:3.40.50.460 152 287 2.5E-100 T 31-10-2018 DY252_07415 1c6038132d404ed7e33296dae7094c0e 368 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 1 356 39.875 T 31-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DY252_07415 1c6038132d404ed7e33296dae7094c0e 368 PIRSF PIRSF000532 1 357 1.8E-117 T 31-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DY252_07415 1c6038132d404ed7e33296dae7094c0e 368 SUPERFAMILY SSF53784 1 346 2.88E-99 T 31-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DY252_07415 1c6038132d404ed7e33296dae7094c0e 368 Gene3D G3DSA:3.40.50.450 3 332 2.5E-100 T 31-10-2018 DY252_07415 1c6038132d404ed7e33296dae7094c0e 368 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 104 120 6.7E-70 T 31-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DY252_07415 1c6038132d404ed7e33296dae7094c0e 368 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 170 186 6.7E-70 T 31-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DY252_07415 1c6038132d404ed7e33296dae7094c0e 368 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 150 168 6.7E-70 T 31-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DY252_07415 1c6038132d404ed7e33296dae7094c0e 368 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 188 205 6.7E-70 T 31-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DY252_07415 1c6038132d404ed7e33296dae7094c0e 368 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 6.7E-70 T 31-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DY252_07415 1c6038132d404ed7e33296dae7094c0e 368 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 132 149 6.7E-70 T 31-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DY252_07415 1c6038132d404ed7e33296dae7094c0e 368 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 5 24 6.7E-70 T 31-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DY252_07415 1c6038132d404ed7e33296dae7094c0e 368 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 224 236 6.7E-70 T 31-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DY252_07415 1c6038132d404ed7e33296dae7094c0e 368 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 271 293 6.7E-70 T 31-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DY252_09520 54231556db7b58fbb1406b2f5eeb2063 178 PIRSF PIRSF000709 1 75 1.8E-6 T 31-10-2018 DY252_09520 54231556db7b58fbb1406b2f5eeb2063 178 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 79 3.5E-8 T 31-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DY252_09520 54231556db7b58fbb1406b2f5eeb2063 178 Gene3D G3DSA:3.40.50.1240 1 169 5.1E-43 T 31-10-2018 IPR029033 Histidine phosphatase superfamily DY252_09520 54231556db7b58fbb1406b2f5eeb2063 178 SUPERFAMILY SSF53254 1 167 1.79E-27 T 31-10-2018 IPR029033 Histidine phosphatase superfamily DY252_09520 54231556db7b58fbb1406b2f5eeb2063 178 SMART SM00855 3 116 0.0098 T 31-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DY252_04880 4568858f25c1428026b39b2c1561c166 256 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 183 200 - T 31-10-2018 IPR000540 Flagellar motor protein MotA, conserved site DY252_04880 4568858f25c1428026b39b2c1561c166 256 Pfam PF01618 MotA/TolQ/ExbB proton channel family 100 214 2.0E-20 T 31-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DY252_04225 dc0d19b0637d654601c68f1c54ce9515 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.1E-30 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_04225 dc0d19b0637d654601c68f1c54ce9515 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.1E-30 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_04225 dc0d19b0637d654601c68f1c54ce9515 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.1E-30 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_04225 dc0d19b0637d654601c68f1c54ce9515 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.1E-30 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_04225 dc0d19b0637d654601c68f1c54ce9515 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.1E-30 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_04225 dc0d19b0637d654601c68f1c54ce9515 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-30 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_04225 dc0d19b0637d654601c68f1c54ce9515 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 188 0.0031 T 31-10-2018 DY252_04225 dc0d19b0637d654601c68f1c54ce9515 246 SUPERFAMILY SSF51735 6 245 1.19E-75 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_04225 dc0d19b0637d654601c68f1c54ce9515 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.6E-11 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_04225 dc0d19b0637d654601c68f1c54ce9515 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.6E-11 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_04225 dc0d19b0637d654601c68f1c54ce9515 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.6E-11 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_04225 dc0d19b0637d654601c68f1c54ce9515 246 Gene3D G3DSA:3.40.50.720 1 246 2.4E-80 T 31-10-2018 DY252_04225 dc0d19b0637d654601c68f1c54ce9515 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 245 2.3E-59 T 31-10-2018 DY252_03835 94d1b8a269b95265e8d3cc5d87807a81 91 Pfam PF12096 Protein of unknown function (DUF3572) 4 85 1.2E-22 T 31-10-2018 IPR021955 Protein of unknown function DUF3572 DY252_07210 8b5bf543cfc64342e93564489b695bf0 274 Pfam PF00795 Carbon-nitrogen hydrolase 6 260 3.0E-56 T 31-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DY252_07210 8b5bf543cfc64342e93564489b695bf0 274 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 153 173 - T 31-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site DY252_07210 8b5bf543cfc64342e93564489b695bf0 274 Gene3D G3DSA:3.60.110.10 5 271 4.6E-88 T 31-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DY252_07210 8b5bf543cfc64342e93564489b695bf0 274 SUPERFAMILY SSF56317 1 266 7.59E-80 T 31-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DY252_11160 b4e86008e26fa115b4656b5652d50531 318 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 31-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DY252_11160 b4e86008e26fa115b4656b5652d50531 318 Gene3D G3DSA:3.40.50.1100 8 315 3.8E-95 T 31-10-2018 DY252_11160 b4e86008e26fa115b4656b5652d50531 318 SUPERFAMILY SSF53686 3 313 7.99E-82 T 31-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DY252_11160 b4e86008e26fa115b4656b5652d50531 318 Gene3D G3DSA:3.40.50.1100 57 153 3.8E-95 T 31-10-2018 DY252_11160 b4e86008e26fa115b4656b5652d50531 318 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 311 1.6E-75 T 31-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DY252_07795 61c2d536b35a394483da87a2310a5e70 653 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 193 4.1E-35 T 31-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DY252_07795 61c2d536b35a394483da87a2310a5e70 653 SUPERFAMILY SSF48179 472 577 2.21E-22 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_07795 61c2d536b35a394483da87a2310a5e70 653 SUPERFAMILY SSF52096 1 280 2.49E-64 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_07795 61c2d536b35a394483da87a2310a5e70 653 Gene3D G3DSA:3.90.226.10 2 288 7.7E-85 T 31-10-2018 DY252_07795 61c2d536b35a394483da87a2310a5e70 653 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 473 566 3.8E-19 T 31-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DY252_07795 61c2d536b35a394483da87a2310a5e70 653 Gene3D G3DSA:1.10.1040.50 476 651 5.6E-56 T 31-10-2018 DY252_07795 61c2d536b35a394483da87a2310a5e70 653 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 293 468 1.2E-57 T 31-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DY252_07795 61c2d536b35a394483da87a2310a5e70 653 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 91 111 - T 31-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DY252_07795 61c2d536b35a394483da87a2310a5e70 653 SUPERFAMILY SSF48179 597 648 3.91E-9 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_07795 61c2d536b35a394483da87a2310a5e70 653 Gene3D G3DSA:3.40.50.720 289 475 4.0E-59 T 31-10-2018 DY252_07795 61c2d536b35a394483da87a2310a5e70 653 SUPERFAMILY SSF51735 289 469 2.22E-51 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_04445 634ef14186df0ee41761c181fd04939e 238 SUPERFAMILY SSF48452 101 213 2.23E-11 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_04445 634ef14186df0ee41761c181fd04939e 238 Gene3D G3DSA:1.25.40.10 95 230 4.8E-13 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_21475 9818cfc1d0d587dbdb5e3f58b39e0b16 479 TIGRFAM TIGR00797 matE: MATE efflux family protein 47 445 1.3E-58 T 31-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DY252_21475 9818cfc1d0d587dbdb5e3f58b39e0b16 479 Pfam PF01554 MatE 47 205 4.2E-19 T 31-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DY252_21475 9818cfc1d0d587dbdb5e3f58b39e0b16 479 Pfam PF01554 MatE 277 432 1.8E-21 T 31-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DY252_21475 9818cfc1d0d587dbdb5e3f58b39e0b16 479 PIRSF PIRSF006603 32 471 4.7E-53 T 31-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DY252_14315 201e2f35b0bfddba3d7c72ed264867eb 734 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 234 249 1.0E-14 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_14315 201e2f35b0bfddba3d7c72ed264867eb 734 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 649 678 1.0E-14 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_14315 201e2f35b0bfddba3d7c72ed264867eb 734 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 572 599 1.0E-14 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_14315 201e2f35b0bfddba3d7c72ed264867eb 734 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 601 630 1.0E-14 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_14315 201e2f35b0bfddba3d7c72ed264867eb 734 Gene3D G3DSA:1.10.287.950 452 734 3.0E-49 T 31-10-2018 DY252_14315 201e2f35b0bfddba3d7c72ed264867eb 734 SMART SM00304 302 354 3.7E-5 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_14315 201e2f35b0bfddba3d7c72ed264867eb 734 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 536 696 2.0E-28 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_14315 201e2f35b0bfddba3d7c72ed264867eb 734 Gene3D G3DSA:1.20.1480.50 264 355 8.7E-9 T 31-10-2018 DY252_14315 201e2f35b0bfddba3d7c72ed264867eb 734 SUPERFAMILY SSF58104 322 727 7.19E-55 T 31-10-2018 DY252_14315 201e2f35b0bfddba3d7c72ed264867eb 734 Gene3D G3DSA:3.30.450.20 356 451 6.7E-6 T 31-10-2018 DY252_14315 201e2f35b0bfddba3d7c72ed264867eb 734 SMART SM00283 470 728 6.6E-37 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_17370 aeda37251e8df76d93fd07618bfcf323 357 SMART SM00382 69 240 4.6E-12 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_17370 aeda37251e8df76d93fd07618bfcf323 357 Hamap MF_00268 Protein RecA [recA]. 16 341 52.422 T 31-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DY252_17370 aeda37251e8df76d93fd07618bfcf323 357 PRINTS PR00142 RecA protein signature 222 250 5.3E-86 T 31-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DY252_17370 aeda37251e8df76d93fd07618bfcf323 357 PRINTS PR00142 RecA protein signature 255 284 5.3E-86 T 31-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DY252_17370 aeda37251e8df76d93fd07618bfcf323 357 PRINTS PR00142 RecA protein signature 309 326 5.3E-86 T 31-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DY252_17370 aeda37251e8df76d93fd07618bfcf323 357 PRINTS PR00142 RecA protein signature 139 168 5.3E-86 T 31-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DY252_17370 aeda37251e8df76d93fd07618bfcf323 357 PRINTS PR00142 RecA protein signature 177 206 5.3E-86 T 31-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DY252_17370 aeda37251e8df76d93fd07618bfcf323 357 PRINTS PR00142 RecA protein signature 105 134 5.3E-86 T 31-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DY252_17370 aeda37251e8df76d93fd07618bfcf323 357 SUPERFAMILY SSF54752 280 337 6.8E-23 T 31-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal DY252_17370 aeda37251e8df76d93fd07618bfcf323 357 Gene3D G3DSA:3.40.50.300 39 279 8.0E-83 T 31-10-2018 DY252_17370 aeda37251e8df76d93fd07618bfcf323 357 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 15 336 6.7E-175 T 31-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DY252_17370 aeda37251e8df76d93fd07618bfcf323 357 Gene3D G3DSA:3.30.250.10 280 357 1.7E-28 T 31-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal DY252_17370 aeda37251e8df76d93fd07618bfcf323 357 ProSitePatterns PS00321 recA signature. 225 233 - T 31-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 DY252_17370 aeda37251e8df76d93fd07618bfcf323 357 SUPERFAMILY SSF52540 16 279 8.11E-66 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_17370 aeda37251e8df76d93fd07618bfcf323 357 Pfam PF00154 recA bacterial DNA recombination protein 18 280 1.0E-146 T 31-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DY252_21910 3df074128292f14636399e86e3b38132 671 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 121 582 7.2E-82 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_21910 3df074128292f14636399e86e3b38132 671 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 21 659 1.8E-193 T 31-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ DY252_07695 ca37b2ad59b1b08105561366a54d8b97 677 Gene3D G3DSA:3.40.50.300 331 559 6.5E-49 T 31-10-2018 DY252_07695 ca37b2ad59b1b08105561366a54d8b97 677 SUPERFAMILY SSF52540 122 555 4.78E-46 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07695 ca37b2ad59b1b08105561366a54d8b97 677 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 133 565 4.1E-105 T 31-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 DY252_09615 c97d27fbf2963c828463935b47938dba 246 SUPERFAMILY SSF55174 3 69 8.98E-11 T 31-10-2018 DY252_09615 c97d27fbf2963c828463935b47938dba 246 Pfam PF01479 S4 domain 5 47 1.7E-8 T 31-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09615 c97d27fbf2963c828463935b47938dba 246 SUPERFAMILY SSF53335 59 243 4.1E-25 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_09615 c97d27fbf2963c828463935b47938dba 246 PIRSF PIRSF005578 1 246 8.7E-103 T 31-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 DY252_09615 c97d27fbf2963c828463935b47938dba 246 SMART SM00363 4 66 1.2E-8 T 31-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09615 c97d27fbf2963c828463935b47938dba 246 Pfam PF01728 FtsJ-like methyltransferase 60 243 1.8E-24 T 31-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 DY252_09615 c97d27fbf2963c828463935b47938dba 246 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 5 237 2.5E-76 T 31-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 DY252_09615 c97d27fbf2963c828463935b47938dba 246 Gene3D G3DSA:3.40.50.150 63 246 5.0E-77 T 31-10-2018 DY252_09615 c97d27fbf2963c828463935b47938dba 246 Gene3D G3DSA:3.10.290.10 1 62 7.7E-24 T 31-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DY252_04495 5d22827c6d629a219b7e32fd51ec2823 471 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 53 67 - T 31-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DY252_04495 5d22827c6d629a219b7e32fd51ec2823 471 SUPERFAMILY SSF161070 29 468 4.97E-140 T 31-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 DY252_04495 5d22827c6d629a219b7e32fd51ec2823 471 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 335 355 1.2E-16 T 31-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DY252_04495 5d22827c6d629a219b7e32fd51ec2823 471 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 37 58 1.2E-16 T 31-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DY252_04495 5d22827c6d629a219b7e32fd51ec2823 471 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 66 85 1.2E-16 T 31-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DY252_04495 5d22827c6d629a219b7e32fd51ec2823 471 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 111 137 1.2E-16 T 31-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DY252_04495 5d22827c6d629a219b7e32fd51ec2823 471 Pfam PF00209 Sodium:neurotransmitter symporter family 175 467 6.3E-32 T 31-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DY252_04495 5d22827c6d629a219b7e32fd51ec2823 471 Pfam PF00209 Sodium:neurotransmitter symporter family 29 147 1.0E-29 T 31-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DY252_20545 8d577855ba74b9e12ff551cf3d93471c 308 PIRSF PIRSF011468 4 301 3.8E-162 T 31-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DY252_20545 8d577855ba74b9e12ff551cf3d93471c 308 Pfam PF06007 Phosphonate metabolism protein PhnJ 14 285 2.7E-148 T 31-10-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DY252_13335 4dddae6ccec6608e370ff24e01b0ea88 773 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 43 773 3.5E-245 T 31-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 DY252_13335 4dddae6ccec6608e370ff24e01b0ea88 773 Pfam PF01103 Surface antigen 462 773 6.7E-76 T 31-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 DY252_13335 4dddae6ccec6608e370ff24e01b0ea88 773 Pfam PF07244 Surface antigen variable number repeat 43 105 1.1E-6 T 31-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DY252_13335 4dddae6ccec6608e370ff24e01b0ea88 773 Pfam PF07244 Surface antigen variable number repeat 191 277 6.5E-15 T 31-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DY252_13335 4dddae6ccec6608e370ff24e01b0ea88 773 Pfam PF07244 Surface antigen variable number repeat 110 186 4.5E-16 T 31-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DY252_13335 4dddae6ccec6608e370ff24e01b0ea88 773 Pfam PF07244 Surface antigen variable number repeat 362 434 1.1E-12 T 31-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DY252_13335 4dddae6ccec6608e370ff24e01b0ea88 773 Pfam PF07244 Surface antigen variable number repeat 280 359 4.6E-11 T 31-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DY252_13335 4dddae6ccec6608e370ff24e01b0ea88 773 PIRSF PIRSF006076 8 773 9.0E-253 T 31-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 DY252_13335 4dddae6ccec6608e370ff24e01b0ea88 773 Gene3D G3DSA:3.10.20.310 190 280 1.2E-20 T 31-10-2018 DY252_13335 4dddae6ccec6608e370ff24e01b0ea88 773 Gene3D G3DSA:2.40.160.50 437 773 3.4E-98 T 31-10-2018 DY252_13335 4dddae6ccec6608e370ff24e01b0ea88 773 Gene3D G3DSA:3.10.20.310 281 357 1.3E-17 T 31-10-2018 DY252_13335 4dddae6ccec6608e370ff24e01b0ea88 773 Gene3D G3DSA:3.10.20.310 359 436 3.7E-22 T 31-10-2018 DY252_13335 4dddae6ccec6608e370ff24e01b0ea88 773 Gene3D G3DSA:3.10.20.310 109 186 1.7E-17 T 31-10-2018 DY252_13335 4dddae6ccec6608e370ff24e01b0ea88 773 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 14 773 24.395 T 31-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 DY252_13335 4dddae6ccec6608e370ff24e01b0ea88 773 Gene3D G3DSA:3.10.20.310 35 108 1.7E-16 T 31-10-2018 DY252_16765 85a2bb0949f926ce95f1424dd8692850 195 Pfam PF01810 LysE type translocator 14 193 9.3E-25 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_13205 1d7e6b44ce4be7eb72ed4fd44590b79a 423 SMART SM01193 4 133 2.6E-92 T 31-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_13205 1d7e6b44ce4be7eb72ed4fd44590b79a 423 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 421 6.8E-127 T 31-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_13205 1d7e6b44ce4be7eb72ed4fd44590b79a 423 Gene3D G3DSA:3.30.390.10 1 126 7.9E-55 T 31-10-2018 IPR029017 Enolase-like, N-terminal DY252_13205 1d7e6b44ce4be7eb72ed4fd44590b79a 423 SUPERFAMILY SSF54826 3 137 2.3E-55 T 31-10-2018 DY252_13205 1d7e6b44ce4be7eb72ed4fd44590b79a 423 Hamap MF_00318 Enolase [eno]. 2 410 44.29 T 31-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_13205 1d7e6b44ce4be7eb72ed4fd44590b79a 423 Gene3D G3DSA:3.20.20.120 128 423 1.3E-127 T 31-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DY252_13205 1d7e6b44ce4be7eb72ed4fd44590b79a 423 ProSitePatterns PS00164 Enolase signature. 333 346 - T 31-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_13205 1d7e6b44ce4be7eb72ed4fd44590b79a 423 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 420 7.0E-203 T 31-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_13205 1d7e6b44ce4be7eb72ed4fd44590b79a 423 SMART SM01192 138 423 3.4E-213 T 31-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_13205 1d7e6b44ce4be7eb72ed4fd44590b79a 423 Pfam PF03952 Enolase, N-terminal domain 4 133 5.9E-59 T 31-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_13205 1d7e6b44ce4be7eb72ed4fd44590b79a 423 PRINTS PR00148 Enolase signature 160 173 1.1E-46 T 31-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_13205 1d7e6b44ce4be7eb72ed4fd44590b79a 423 PRINTS PR00148 Enolase signature 362 379 1.1E-46 T 31-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_13205 1d7e6b44ce4be7eb72ed4fd44590b79a 423 PRINTS PR00148 Enolase signature 37 51 1.1E-46 T 31-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_13205 1d7e6b44ce4be7eb72ed4fd44590b79a 423 PRINTS PR00148 Enolase signature 333 347 1.1E-46 T 31-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_13205 1d7e6b44ce4be7eb72ed4fd44590b79a 423 PRINTS PR00148 Enolase signature 310 321 1.1E-46 T 31-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_13205 1d7e6b44ce4be7eb72ed4fd44590b79a 423 PRINTS PR00148 Enolase signature 106 122 1.1E-46 T 31-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_13205 1d7e6b44ce4be7eb72ed4fd44590b79a 423 SUPERFAMILY SSF51604 139 421 5.52E-124 T 31-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DY252_13205 1d7e6b44ce4be7eb72ed4fd44590b79a 423 PIRSF PIRSF001400 1 423 7.9E-187 T 31-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DY252_16925 196f8636df6822a09978090b6f2072e1 370 Gene3D G3DSA:3.40.50.2000 92 168 6.3E-26 T 31-10-2018 DY252_16925 196f8636df6822a09978090b6f2072e1 370 Pfam PF00534 Glycosyl transferases group 1 177 305 1.0E-14 T 31-10-2018 IPR001296 Glycosyl transferase, family 1 DY252_16925 196f8636df6822a09978090b6f2072e1 370 Gene3D G3DSA:3.40.50.2000 169 333 6.3E-26 T 31-10-2018 DY252_16925 196f8636df6822a09978090b6f2072e1 370 Pfam PF13579 Glycosyl transferase 4-like domain 22 166 2.5E-7 T 31-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DY252_16925 196f8636df6822a09978090b6f2072e1 370 SUPERFAMILY SSF53756 28 346 1.75E-33 T 31-10-2018 DY252_02930 6cfc32148ffa337668e296879c71fa98 328 Pfam PF00892 EamA-like transporter family 154 284 3.0E-12 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_02930 6cfc32148ffa337668e296879c71fa98 328 Pfam PF00892 EamA-like transporter family 14 145 1.1E-19 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_02930 6cfc32148ffa337668e296879c71fa98 328 SUPERFAMILY SSF103481 188 287 6.28E-13 T 31-10-2018 DY252_02930 6cfc32148ffa337668e296879c71fa98 328 SUPERFAMILY SSF103481 48 147 2.88E-15 T 31-10-2018 DY252_09015 688c086d4a250083d32a867b033d5a32 77 Gene3D G3DSA:2.40.50.140 2 77 6.7E-34 T 31-10-2018 DY252_09015 688c086d4a250083d32a867b033d5a32 77 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 74 9.0E-24 T 31-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_09015 688c086d4a250083d32a867b033d5a32 77 Pfam PF00366 Ribosomal protein S17 8 74 7.3E-32 T 31-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_09015 688c086d4a250083d32a867b033d5a32 77 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 3 74 2.7E-36 T 31-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_09015 688c086d4a250083d32a867b033d5a32 77 SUPERFAMILY SSF50249 2 74 6.43E-31 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_09015 688c086d4a250083d32a867b033d5a32 77 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 76 23.617 T 31-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_09015 688c086d4a250083d32a867b033d5a32 77 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 2.7E-13 T 31-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_09015 688c086d4a250083d32a867b033d5a32 77 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 2.7E-13 T 31-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_09015 688c086d4a250083d32a867b033d5a32 77 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 2.7E-13 T 31-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_09015 688c086d4a250083d32a867b033d5a32 77 ProSitePatterns PS00056 Ribosomal protein S17 signature. 54 66 - T 31-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09020 794a5d5ae5579f3177bb388a9b566347 122 SUPERFAMILY SSF50193 1 122 5.23E-52 T 31-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 DY252_09020 794a5d5ae5579f3177bb388a9b566347 122 Gene3D G3DSA:2.40.150.20 1 122 1.8E-54 T 31-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 DY252_09020 794a5d5ae5579f3177bb388a9b566347 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 3.5E-55 T 31-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DY252_09020 794a5d5ae5579f3177bb388a9b566347 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.8E-58 T 31-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 DY252_09020 794a5d5ae5579f3177bb388a9b566347 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 31-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09020 794a5d5ae5579f3177bb388a9b566347 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.586 T 31-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DY252_09020 794a5d5ae5579f3177bb388a9b566347 122 SMART SM01374 1 122 4.1E-86 T 31-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DY252_11785 e67b492b702086fab692557c3aad23fa 259 Gene3D G3DSA:3.40.630.30 8 160 3.9E-22 T 31-10-2018 DY252_11785 e67b492b702086fab692557c3aad23fa 259 SUPERFAMILY SSF55729 1 221 2.34E-34 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_11785 e67b492b702086fab692557c3aad23fa 259 Pfam PF13444 Acetyltransferase (GNAT) domain 23 127 3.2E-26 T 31-10-2018 DY252_05150 2a596b7634410d7a4c36d199807ab741 256 Pfam PF00753 Metallo-beta-lactamase superfamily 16 172 2.0E-18 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_05150 2a596b7634410d7a4c36d199807ab741 256 SUPERFAMILY SSF56281 5 256 2.03E-71 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_05150 2a596b7634410d7a4c36d199807ab741 256 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 7 256 5.8E-100 T 31-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DY252_05150 2a596b7634410d7a4c36d199807ab741 256 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 173 256 9.2E-25 T 31-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DY252_05150 2a596b7634410d7a4c36d199807ab741 256 Gene3D G3DSA:3.60.15.10 5 256 2.6E-87 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_05150 2a596b7634410d7a4c36d199807ab741 256 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 4 256 43.535 T 31-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DY252_05150 2a596b7634410d7a4c36d199807ab741 256 SMART SM00849 14 172 5.3E-36 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_05150 2a596b7634410d7a4c36d199807ab741 256 PIRSF PIRSF005457 1 256 3.2E-103 T 31-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DY252_01845 7bbff8c1b4f3c07d37faae58c7946f32 397 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 13 366 4.1E-84 T 31-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 DY252_01845 7bbff8c1b4f3c07d37faae58c7946f32 397 SMART SM00729 10 229 1.5E-40 T 31-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DY252_01845 7bbff8c1b4f3c07d37faae58c7946f32 397 Pfam PF06969 HemN C-terminal domain 318 382 3.3E-10 T 31-10-2018 IPR010723 HemN, C-terminal DY252_01845 7bbff8c1b4f3c07d37faae58c7946f32 397 Pfam PF04055 Radical SAM superfamily 15 172 4.4E-14 T 31-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DY252_01845 7bbff8c1b4f3c07d37faae58c7946f32 397 Gene3D G3DSA:3.80.30.20 1 292 7.9E-85 T 31-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DY252_01845 7bbff8c1b4f3c07d37faae58c7946f32 397 SUPERFAMILY SSF102114 10 393 1.14E-102 T 31-10-2018 DY252_07825 81ab3c515d71f481d29eb1bff64d8b9a 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 122 8.5E-10 T 31-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DY252_07825 81ab3c515d71f481d29eb1bff64d8b9a 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 220 2.5E-23 T 31-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DY252_07825 81ab3c515d71f481d29eb1bff64d8b9a 383 Gene3D G3DSA:2.40.110.10 126 237 2.0E-44 T 31-10-2018 DY252_07825 81ab3c515d71f481d29eb1bff64d8b9a 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 381 2.3E-45 T 31-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DY252_07825 81ab3c515d71f481d29eb1bff64d8b9a 383 Gene3D G3DSA:1.10.540.10 8 125 7.0E-21 T 31-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DY252_07825 81ab3c515d71f481d29eb1bff64d8b9a 383 SUPERFAMILY SSF56645 11 243 9.29E-61 T 31-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DY252_07825 81ab3c515d71f481d29eb1bff64d8b9a 383 Gene3D G3DSA:1.20.140.10 238 383 8.6E-46 T 31-10-2018 DY252_07825 81ab3c515d71f481d29eb1bff64d8b9a 383 SUPERFAMILY SSF47203 232 382 2.9E-49 T 31-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DY252_03715 936ebb396774b4578bc52adc3e44c3da 401 Pfam PF13487 HD domain 210 271 1.4E-15 T 31-10-2018 DY252_03715 936ebb396774b4578bc52adc3e44c3da 401 Pfam PF00072 Response regulator receiver domain 7 116 1.5E-16 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_03715 936ebb396774b4578bc52adc3e44c3da 401 Gene3D G3DSA:1.10.3210.10 135 318 2.3E-20 T 31-10-2018 DY252_03715 936ebb396774b4578bc52adc3e44c3da 401 SUPERFAMILY SSF52172 4 137 4.7E-24 T 31-10-2018 IPR011006 CheY-like superfamily DY252_03715 936ebb396774b4578bc52adc3e44c3da 401 SMART SM00448 5 117 7.3E-16 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_03715 936ebb396774b4578bc52adc3e44c3da 401 Gene3D G3DSA:3.40.50.2300 1 134 4.9E-25 T 31-10-2018 DY252_15785 0a1f0e36f95f2a5b480f6a8ceda85284 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.1E-19 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_15785 0a1f0e36f95f2a5b480f6a8ceda85284 297 Pfam PF03466 LysR substrate binding domain 89 288 5.4E-46 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_15785 0a1f0e36f95f2a5b480f6a8ceda85284 297 Gene3D G3DSA:1.10.10.10 1 89 3.1E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_15785 0a1f0e36f95f2a5b480f6a8ceda85284 297 SUPERFAMILY SSF46785 1 110 3.69E-22 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_15785 0a1f0e36f95f2a5b480f6a8ceda85284 297 SUPERFAMILY SSF53850 90 295 2.1E-41 T 31-10-2018 DY252_15785 0a1f0e36f95f2a5b480f6a8ceda85284 297 Gene3D G3DSA:3.40.190.290 90 296 6.9E-39 T 31-10-2018 DY252_15785 0a1f0e36f95f2a5b480f6a8ceda85284 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.6E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_15785 0a1f0e36f95f2a5b480f6a8ceda85284 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.6E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_15785 0a1f0e36f95f2a5b480f6a8ceda85284 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.6E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_13845 529cac1a65cd707b273218047d30c7e4 165 Pfam PF13279 Thioesterase-like superfamily 20 138 5.8E-21 T 31-10-2018 DY252_13845 529cac1a65cd707b273218047d30c7e4 165 SUPERFAMILY SSF54637 15 164 2.42E-45 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_13845 529cac1a65cd707b273218047d30c7e4 165 Gene3D G3DSA:3.10.129.10 10 146 5.8E-38 T 31-10-2018 DY252_03215 67f5237d6778e08357f0c8dbd17a65a8 398 SUPERFAMILY SSF46626 294 394 3.05E-6 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_03215 67f5237d6778e08357f0c8dbd17a65a8 398 Pfam PF06181 Urate oxidase N-terminal 5 295 2.3E-130 T 31-10-2018 IPR010389 Urate oxidase N-terminal DY252_06070 ca5d32bbf59a9ec7f8b0e980fa8fdf73 267 Gene3D G3DSA:2.60.40.2250 10 254 6.6E-68 T 31-10-2018 DY252_06070 ca5d32bbf59a9ec7f8b0e980fa8fdf73 267 Pfam PF01841 Transglutaminase-like superfamily 129 225 4.1E-23 T 31-10-2018 IPR002931 Transglutaminase-like DY252_06070 ca5d32bbf59a9ec7f8b0e980fa8fdf73 267 SUPERFAMILY SSF54001 49 253 2.8E-41 T 31-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DY252_06070 ca5d32bbf59a9ec7f8b0e980fa8fdf73 267 SMART SM00460 161 227 6.9E-17 T 31-10-2018 IPR002931 Transglutaminase-like DY252_06070 ca5d32bbf59a9ec7f8b0e980fa8fdf73 267 Gene3D G3DSA:3.10.620.30 79 247 6.6E-68 T 31-10-2018 DY252_03200 435a7e438484bc60d107e3a196a6ed0f 389 Gene3D G3DSA:1.10.287.950 84 377 1.6E-53 T 31-10-2018 DY252_03200 435a7e438484bc60d107e3a196a6ed0f 389 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 250 279 5.1E-22 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_03200 435a7e438484bc60d107e3a196a6ed0f 389 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 221 248 5.1E-22 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_03200 435a7e438484bc60d107e3a196a6ed0f 389 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 144 173 5.1E-22 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_03200 435a7e438484bc60d107e3a196a6ed0f 389 SUPERFAMILY SSF58104 32 376 1.31E-58 T 31-10-2018 DY252_03200 435a7e438484bc60d107e3a196a6ed0f 389 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 181 343 7.7E-31 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_03200 435a7e438484bc60d107e3a196a6ed0f 389 SMART SM00283 123 377 1.6E-42 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_20945 f7f7f609364863974ec1b8904703a145 260 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 43 259 3.6E-55 T 31-10-2018 IPR014147 Type IV conjugative transfer protein TrbJ DY252_02595 7e3bfe398a53c4e0d114567140d9338d 816 SUPERFAMILY SSF46785 745 808 9.52E-22 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_02595 7e3bfe398a53c4e0d114567140d9338d 816 SMART SM00843 744 809 4.9E-37 T 31-10-2018 IPR018541 FtsK gamma domain DY252_02595 7e3bfe398a53c4e0d114567140d9338d 816 Gene3D G3DSA:3.40.50.300 414 721 2.1E-114 T 31-10-2018 DY252_02595 7e3bfe398a53c4e0d114567140d9338d 816 Pfam PF09397 Ftsk gamma domain 746 806 1.1E-28 T 31-10-2018 IPR018541 FtsK gamma domain DY252_02595 7e3bfe398a53c4e0d114567140d9338d 816 Gene3D G3DSA:1.10.10.10 740 805 2.2E-27 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_02595 7e3bfe398a53c4e0d114567140d9338d 816 Gene3D G3DSA:3.30.980.40 309 413 1.6E-31 T 31-10-2018 DY252_02595 7e3bfe398a53c4e0d114567140d9338d 816 SUPERFAMILY SSF52540 402 707 7.61E-50 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_02595 7e3bfe398a53c4e0d114567140d9338d 816 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 28 183 1.2E-24 T 31-10-2018 IPR025199 DNA translocase FtsK, 4TM region DY252_02595 7e3bfe398a53c4e0d114567140d9338d 816 Pfam PF01580 FtsK/SpoIIIE family 417 636 4.1E-65 T 31-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 DY252_17605 92aa79131c325b23382462d7620e7beb 448 PRINTS PR00207 Flagellin signature 37 54 2.1E-16 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_17605 92aa79131c325b23382462d7620e7beb 448 PRINTS PR00207 Flagellin signature 76 95 2.1E-16 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_17605 92aa79131c325b23382462d7620e7beb 448 PRINTS PR00207 Flagellin signature 111 134 2.1E-16 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_17605 92aa79131c325b23382462d7620e7beb 448 Gene3D G3DSA:1.20.1330.10 280 397 4.0E-9 T 31-10-2018 DY252_17605 92aa79131c325b23382462d7620e7beb 448 Gene3D G3DSA:1.20.1330.10 44 247 4.6E-26 T 31-10-2018 DY252_17605 92aa79131c325b23382462d7620e7beb 448 Gene3D G3DSA:1.10.8.410 398 447 1.2E-21 T 31-10-2018 DY252_17605 92aa79131c325b23382462d7620e7beb 448 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 139 8.6E-29 T 31-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DY252_17605 92aa79131c325b23382462d7620e7beb 448 Pfam PF00700 Bacterial flagellin C-terminal helical region 362 446 1.6E-23 T 31-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DY252_17605 92aa79131c325b23382462d7620e7beb 448 SUPERFAMILY SSF64518 1 447 2.88E-67 T 31-10-2018 DY252_06665 8d701a31e6c0c9a07f0f9f90008fa940 350 SUPERFAMILY SSF111337 1 340 2.75E-131 T 31-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DY252_06665 8d701a31e6c0c9a07f0f9f90008fa940 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 45.607 T 31-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DY252_06665 8d701a31e6c0c9a07f0f9f90008fa940 350 Pfam PF02547 Queuosine biosynthesis protein 4 340 1.8E-132 T 31-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DY252_06665 8d701a31e6c0c9a07f0f9f90008fa940 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 339 4.8E-120 T 31-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DY252_06665 8d701a31e6c0c9a07f0f9f90008fa940 350 Gene3D G3DSA:3.40.1780.10 15 339 1.9E-115 T 31-10-2018 DY252_06665 8d701a31e6c0c9a07f0f9f90008fa940 350 Gene3D G3DSA:2.40.10.240 62 162 1.9E-115 T 31-10-2018 DY252_06630 7570f465379ab70dc46f37b90fcc6afc 467 SUPERFAMILY SSF55103 227 466 3.43E-74 T 31-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DY252_06630 7570f465379ab70dc46f37b90fcc6afc 467 SUPERFAMILY SSF56176 9 223 2.2E-70 T 31-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DY252_06630 7570f465379ab70dc46f37b90fcc6afc 467 Gene3D G3DSA:3.30.70.2740 342 423 8.7E-12 T 31-10-2018 DY252_06630 7570f465379ab70dc46f37b90fcc6afc 467 Gene3D G3DSA:3.30.465.40 20 243 1.5E-75 T 31-10-2018 DY252_06630 7570f465379ab70dc46f37b90fcc6afc 467 Pfam PF01565 FAD binding domain 49 185 3.5E-41 T 31-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DY252_06630 7570f465379ab70dc46f37b90fcc6afc 467 Pfam PF02913 FAD linked oxidases, C-terminal domain 222 463 2.5E-71 T 31-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DY252_06630 7570f465379ab70dc46f37b90fcc6afc 467 Gene3D G3DSA:1.10.45.10 424 464 1.5E-13 T 31-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DY252_10635 ad082918a040a846a8a2dd3627a0fae7 186 Gene3D G3DSA:3.40.50.850 1 186 2.4E-54 T 31-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DY252_10635 ad082918a040a846a8a2dd3627a0fae7 186 Pfam PF00857 Isochorismatase family 8 163 3.2E-29 T 31-10-2018 IPR000868 Isochorismatase-like GO:0003824 DY252_10635 ad082918a040a846a8a2dd3627a0fae7 186 SUPERFAMILY SSF52499 1 186 9.03E-47 T 31-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DY252_16075 241e9ee30c96f6b69a45d74aefa1dd88 106 Pfam PF00893 Small Multidrug Resistance protein 1 93 9.1E-29 T 31-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DY252_16075 241e9ee30c96f6b69a45d74aefa1dd88 106 SUPERFAMILY SSF103481 6 104 3.01E-20 T 31-10-2018 DY252_16075 241e9ee30c96f6b69a45d74aefa1dd88 106 Gene3D G3DSA:1.10.3730.20 1 106 1.2E-33 T 31-10-2018 DY252_01855 9f21d1fe2bdb6cbc5e06318a2eab8d3d 310 SUPERFAMILY SSF53448 2 217 1.13E-39 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_01855 9f21d1fe2bdb6cbc5e06318a2eab8d3d 310 Pfam PF00535 Glycosyl transferase family 2 6 126 9.4E-29 T 31-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DY252_01855 9f21d1fe2bdb6cbc5e06318a2eab8d3d 310 Gene3D G3DSA:3.90.550.10 1 236 1.7E-36 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_01585 d6b61985b5512d394dd1377632bfdfd4 324 SUPERFAMILY SSF50129 3 145 1.45E-39 T 31-10-2018 IPR011032 GroES-like superfamily DY252_01585 d6b61985b5512d394dd1377632bfdfd4 324 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 31-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 DY252_01585 d6b61985b5512d394dd1377632bfdfd4 324 Gene3D G3DSA:3.90.180.10 13 318 5.0E-118 T 31-10-2018 DY252_01585 d6b61985b5512d394dd1377632bfdfd4 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 1.4E-8 T 31-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DY252_01585 d6b61985b5512d394dd1377632bfdfd4 324 SMART SM00829 11 322 3.0E-45 T 31-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DY252_01585 d6b61985b5512d394dd1377632bfdfd4 324 SUPERFAMILY SSF51735 112 272 3.78E-49 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_01585 d6b61985b5512d394dd1377632bfdfd4 324 Gene3D G3DSA:3.40.50.720 124 268 5.0E-118 T 31-10-2018 DY252_01585 d6b61985b5512d394dd1377632bfdfd4 324 Pfam PF00107 Zinc-binding dehydrogenase 152 255 2.9E-29 T 31-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DY252_00400 1a9279cfc2a2bc5ea214c593aa15b593 216 SUPERFAMILY SSF52833 54 212 4.67E-51 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_00400 1a9279cfc2a2bc5ea214c593aa15b593 216 Gene3D G3DSA:3.40.30.10 35 213 3.1E-57 T 31-10-2018 DY252_00400 1a9279cfc2a2bc5ea214c593aa15b593 216 Pfam PF02630 SCO1/SenC 28 193 4.5E-45 T 31-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_01645 5723d72a2bfae4bc90dd28203974c9ca 168 Pfam PF04390 Lipopolysaccharide-assembly 42 160 3.6E-5 T 31-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 DY252_01645 5723d72a2bfae4bc90dd28203974c9ca 168 Gene3D G3DSA:3.30.160.150 31 168 4.9E-33 T 31-10-2018 DY252_08865 279612ff8a78c1caf25cbc52fae09de5 172 Pfam PF08281 Sigma-70, region 4 119 165 1.4E-9 T 31-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DY252_08865 279612ff8a78c1caf25cbc52fae09de5 172 Gene3D G3DSA:1.10.1740.10 1 84 5.0E-14 T 31-10-2018 DY252_08865 279612ff8a78c1caf25cbc52fae09de5 172 Gene3D G3DSA:1.10.10.10 86 169 1.7E-9 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_08865 279612ff8a78c1caf25cbc52fae09de5 172 SUPERFAMILY SSF88659 116 166 3.49E-8 T 31-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DY252_08865 279612ff8a78c1caf25cbc52fae09de5 172 SUPERFAMILY SSF88946 5 97 3.14E-14 T 31-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DY252_08865 279612ff8a78c1caf25cbc52fae09de5 172 Pfam PF04542 Sigma-70 region 2 25 83 1.0E-9 T 31-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DY252_08865 279612ff8a78c1caf25cbc52fae09de5 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 165 4.0E-16 T 31-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DY252_09370 1dc154b78ca59a93a67ce5815ed88370 98 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 5 95 2.2E-33 T 31-10-2018 IPR007711 Toxin HigB-1 DY252_09370 1dc154b78ca59a93a67ce5815ed88370 98 Gene3D G3DSA:3.30.2310.20 1 97 1.1E-18 T 31-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DY252_09370 1dc154b78ca59a93a67ce5815ed88370 98 SUPERFAMILY SSF143011 4 84 1.09E-16 T 31-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DY252_16305 d6825b5d860202a4835349539559af3b 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 2.5E-128 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_16305 d6825b5d860202a4835349539559af3b 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 417 2.6E-110 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_16305 d6825b5d860202a4835349539559af3b 428 PIRSF PIRSF006066 1 428 1.6E-148 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_12925 d6a7d649babba3cb762976bd55e7d294 506 Pfam PF02653 Branched-chain amino acid transport system / permease component 190 476 7.5E-50 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_04130 2621db4e0f0d89cb9aeb240c06c65b0e 488 SUPERFAMILY SSF53067 2 246 4.63E-68 T 31-10-2018 DY252_04130 2621db4e0f0d89cb9aeb240c06c65b0e 488 Gene3D G3DSA:3.30.420.40 1 244 1.3E-76 T 31-10-2018 DY252_04130 2621db4e0f0d89cb9aeb240c06c65b0e 488 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 243 5.9E-66 T 31-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DY252_04130 2621db4e0f0d89cb9aeb240c06c65b0e 488 Gene3D G3DSA:3.30.420.40 245 485 1.0E-74 T 31-10-2018 DY252_04130 2621db4e0f0d89cb9aeb240c06c65b0e 488 PIRSF PIRSF000538 1 487 1.6E-124 T 31-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DY252_04130 2621db4e0f0d89cb9aeb240c06c65b0e 488 SUPERFAMILY SSF53067 245 483 2.09E-56 T 31-10-2018 DY252_04130 2621db4e0f0d89cb9aeb240c06c65b0e 488 TIGRFAM TIGR01312 XylB: xylulokinase 3 478 1.6E-160 T 31-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 DY252_04130 2621db4e0f0d89cb9aeb240c06c65b0e 488 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 254 436 3.5E-29 T 31-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DY252_04130 2621db4e0f0d89cb9aeb240c06c65b0e 488 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 128 140 - T 31-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DY252_12360 c29bdd399ee02b836aadcdbcd3a3f554 248 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 226 7.1E-18 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_12360 c29bdd399ee02b836aadcdbcd3a3f554 248 Gene3D G3DSA:1.10.3720.10 4 234 1.8E-49 T 31-10-2018 IPR035906 MetI-like superfamily DY252_12360 c29bdd399ee02b836aadcdbcd3a3f554 248 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 123 2.6E-18 T 31-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DY252_12360 c29bdd399ee02b836aadcdbcd3a3f554 248 SUPERFAMILY SSF161098 14 230 2.62E-40 T 31-10-2018 IPR035906 MetI-like superfamily DY252_13990 8a8eeb8c33236317c2663b0d4d2c0022 314 Gene3D G3DSA:2.60.120.10 54 151 9.4E-12 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_13990 8a8eeb8c33236317c2663b0d4d2c0022 314 SMART SM00342 227 310 3.7E-18 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_13990 8a8eeb8c33236317c2663b0d4d2c0022 314 SUPERFAMILY SSF51182 61 135 2.58E-14 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_13990 8a8eeb8c33236317c2663b0d4d2c0022 314 Gene3D G3DSA:1.10.10.60 206 314 1.8E-20 T 31-10-2018 DY252_13990 8a8eeb8c33236317c2663b0d4d2c0022 314 SUPERFAMILY SSF46689 265 312 4.03E-9 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_13990 8a8eeb8c33236317c2663b0d4d2c0022 314 Pfam PF12833 Helix-turn-helix domain 233 311 3.2E-17 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_13990 8a8eeb8c33236317c2663b0d4d2c0022 314 Pfam PF02311 AraC-like ligand binding domain 50 116 5.3E-10 T 31-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DY252_13990 8a8eeb8c33236317c2663b0d4d2c0022 314 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 294 310 8.1E-5 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_13990 8a8eeb8c33236317c2663b0d4d2c0022 314 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 279 294 8.1E-5 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_11705 4f3c14b2c9c65db8ce088de56a62ec2a 66 Pfam PF00403 Heavy-metal-associated domain 4 60 1.5E-15 T 31-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DY252_11705 4f3c14b2c9c65db8ce088de56a62ec2a 66 Gene3D G3DSA:3.30.70.100 1 64 1.2E-21 T 31-10-2018 DY252_11705 4f3c14b2c9c65db8ce088de56a62ec2a 66 SUPERFAMILY SSF55008 2 63 2.23E-18 T 31-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DY252_00520 21e414e88bd64a26feb4cdadae2a9820 336 SUPERFAMILY SSF52540 45 277 5.87E-19 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_00520 21e414e88bd64a26feb4cdadae2a9820 336 Pfam PF05621 Bacterial TniB protein 14 270 1.7E-32 T 31-10-2018 IPR008868 Bacterial TniB DY252_00520 21e414e88bd64a26feb4cdadae2a9820 336 SMART SM00382 46 222 1.4E-7 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_00520 21e414e88bd64a26feb4cdadae2a9820 336 Gene3D G3DSA:3.40.50.300 24 197 3.9E-17 T 31-10-2018 DY252_02575 8264f364290a1113e73c68d6805dbe23 1053 TIGRFAM TIGR02786 addB_alphas: double-strand break repair protein AddB 28 1029 7.1E-297 T 31-10-2018 IPR014153 Double-strand break repair protein AddB DY252_02575 8264f364290a1113e73c68d6805dbe23 1053 Pfam PF12705 PD-(D/E)XK nuclease superfamily 764 1003 2.5E-22 T 31-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type DY252_02575 8264f364290a1113e73c68d6805dbe23 1053 SUPERFAMILY SSF52540 349 726 1.99E-31 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_10455 21eabc34440bdf778992b72836a68e4d 364 SUPERFAMILY SSF50331 254 361 3.16E-8 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_10455 21eabc34440bdf778992b72836a68e4d 364 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_10455 21eabc34440bdf778992b72836a68e4d 364 Pfam PF00005 ABC transporter 37 177 6.9E-34 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_10455 21eabc34440bdf778992b72836a68e4d 364 Gene3D G3DSA:2.40.50.940 238 362 7.6E-10 T 31-10-2018 DY252_10455 21eabc34440bdf778992b72836a68e4d 364 SUPERFAMILY SSF52540 18 258 6.1E-82 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_10455 21eabc34440bdf778992b72836a68e4d 364 Pfam PF08402 TOBE domain 293 361 6.3E-7 T 31-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DY252_10455 21eabc34440bdf778992b72836a68e4d 364 Gene3D G3DSA:2.40.50.140 297 353 7.6E-10 T 31-10-2018 DY252_10455 21eabc34440bdf778992b72836a68e4d 364 Gene3D G3DSA:3.40.50.300 17 237 3.1E-65 T 31-10-2018 DY252_10455 21eabc34440bdf778992b72836a68e4d 364 SMART SM00382 43 227 1.8E-18 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_11640 7eaa75fa2117838cb14ce731a2b5209a 440 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 31 438 8.8E-109 T 31-10-2018 DY252_11640 7eaa75fa2117838cb14ce731a2b5209a 440 SUPERFAMILY SSF51338 15 439 1.18E-25 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_11640 7eaa75fa2117838cb14ce731a2b5209a 440 Gene3D G3DSA:3.20.20.140 70 382 1.1E-121 T 31-10-2018 DY252_11640 7eaa75fa2117838cb14ce731a2b5209a 440 Hamap MF_00220_B Dihydroorotase [pyrC]. 13 438 37.977 T 31-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_11640 7eaa75fa2117838cb14ce731a2b5209a 440 Gene3D G3DSA:2.30.40.10 19 433 1.1E-121 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_11640 7eaa75fa2117838cb14ce731a2b5209a 440 SUPERFAMILY SSF51556 69 379 2.29E-91 T 31-10-2018 IPR032466 Metal-dependent hydrolase DY252_11640 7eaa75fa2117838cb14ce731a2b5209a 440 Pfam PF01979 Amidohydrolase family 67 435 5.7E-20 T 31-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DY252_04320 a2d0bb1b79a1b4b7a9fd4872139d6ef1 196 PIRSF PIRSF005413 2 195 9.5E-76 T 31-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04320 a2d0bb1b79a1b4b7a9fd4872139d6ef1 196 SUPERFAMILY SSF110111 62 182 1.01E-51 T 31-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04320 a2d0bb1b79a1b4b7a9fd4872139d6ef1 196 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 35 180 1.7E-60 T 31-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04320 a2d0bb1b79a1b4b7a9fd4872139d6ef1 196 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 186 41.008 T 31-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04320 a2d0bb1b79a1b4b7a9fd4872139d6ef1 196 Gene3D G3DSA:2.60.370.10 56 194 1.9E-59 T 31-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_10875 a43bc10c3a5242da25b55dace512d6fe 175 SUPERFAMILY SSF51161 4 168 1.52E-45 T 31-10-2018 IPR011004 Trimeric LpxA-like superfamily DY252_10875 a43bc10c3a5242da25b55dace512d6fe 175 Gene3D G3DSA:2.160.10.10 1 173 5.9E-59 T 31-10-2018 DY252_10875 a43bc10c3a5242da25b55dace512d6fe 175 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 44 3.4E-4 T 31-10-2018 IPR001451 Hexapeptide repeat DY252_08280 1432d57a78e49f9e0b7fcdffc1ca9dce 212 SUPERFAMILY SSF47616 85 201 2.37E-17 T 31-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DY252_08280 1432d57a78e49f9e0b7fcdffc1ca9dce 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 7 78 2.5E-15 T 31-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DY252_08280 1432d57a78e49f9e0b7fcdffc1ca9dce 212 SUPERFAMILY SSF52833 7 88 2.5E-25 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_08280 1432d57a78e49f9e0b7fcdffc1ca9dce 212 Gene3D G3DSA:1.20.1050.10 87 192 3.4E-49 T 31-10-2018 DY252_08280 1432d57a78e49f9e0b7fcdffc1ca9dce 212 Gene3D G3DSA:3.40.30.10 9 197 3.4E-49 T 31-10-2018 DY252_05280 d904b77ab2aa380d9974eb181fb64cd1 150 TIGRFAM TIGR01841 phasin: phasin family protein 51 139 5.5E-17 T 31-10-2018 IPR010127 Phasin, subfamily 1 DY252_05280 d904b77ab2aa380d9974eb181fb64cd1 150 Pfam PF09361 Phasin protein 32 132 5.4E-18 T 31-10-2018 IPR018968 Phasin DY252_09885 e4a245b80cc59220ec1783c1b1c8fff4 249 SUPERFAMILY SSF46785 17 88 6.82E-20 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_09885 e4a245b80cc59220ec1783c1b1c8fff4 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 6.4E-9 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_09885 e4a245b80cc59220ec1783c1b1c8fff4 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 6.4E-9 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_09885 e4a245b80cc59220ec1783c1b1c8fff4 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 84 1.9E-19 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_09885 e4a245b80cc59220ec1783c1b1c8fff4 249 Gene3D G3DSA:1.20.120.530 104 247 2.2E-24 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_09885 e4a245b80cc59220ec1783c1b1c8fff4 249 SUPERFAMILY SSF48008 105 240 4.18E-22 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_09885 e4a245b80cc59220ec1783c1b1c8fff4 249 Pfam PF07729 FCD domain 109 234 3.1E-20 T 31-10-2018 IPR011711 GntR, C-terminal DY252_09885 e4a245b80cc59220ec1783c1b1c8fff4 249 SMART SM00895 109 235 6.6E-18 T 31-10-2018 IPR011711 GntR, C-terminal DY252_09885 e4a245b80cc59220ec1783c1b1c8fff4 249 SMART SM00345 25 84 1.2E-20 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_09885 e4a245b80cc59220ec1783c1b1c8fff4 249 Gene3D G3DSA:1.10.10.10 11 84 1.1E-20 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_09460 d3e2ea573feb59fd2b482264d64c222e 339 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 39 308 1.6E-54 T 31-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 DY252_09460 d3e2ea573feb59fd2b482264d64c222e 339 Gene3D G3DSA:3.40.630.10 8 311 4.5E-88 T 31-10-2018 DY252_09460 d3e2ea573feb59fd2b482264d64c222e 339 PIRSF PIRSF039012 1 315 5.7E-80 T 31-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 DY252_09460 d3e2ea573feb59fd2b482264d64c222e 339 SUPERFAMILY SSF53187 23 308 1.03E-70 T 31-10-2018 DY252_12860 a5b4db99639a7c5e42c27269680d6c3c 165 Pfam PF01029 NusB family 15 153 1.4E-29 T 31-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DY252_12860 a5b4db99639a7c5e42c27269680d6c3c 165 SUPERFAMILY SSF48013 12 159 6.28E-34 T 31-10-2018 IPR035926 NusB-like superfamily DY252_12860 a5b4db99639a7c5e42c27269680d6c3c 165 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 13 156 6.0E-37 T 31-10-2018 IPR011605 NusB antitermination factor GO:0006353 DY252_12860 a5b4db99639a7c5e42c27269680d6c3c 165 Gene3D G3DSA:1.10.940.10 7 162 7.1E-37 T 31-10-2018 IPR035926 NusB-like superfamily DY252_12860 a5b4db99639a7c5e42c27269680d6c3c 165 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 11 158 20.768 T 31-10-2018 IPR011605 NusB antitermination factor GO:0006353 DY252_04345 cc19cfe5e89e9555a57b50d1c25833c9 139 PRINTS PR00103 cAMP-dependent protein kinase signature 31 45 2.3E-5 T 31-10-2018 DY252_04345 cc19cfe5e89e9555a57b50d1c25833c9 139 PRINTS PR00103 cAMP-dependent protein kinase signature 16 30 2.3E-5 T 31-10-2018 DY252_04345 cc19cfe5e89e9555a57b50d1c25833c9 139 PRINTS PR00103 cAMP-dependent protein kinase signature 61 70 2.3E-5 T 31-10-2018 DY252_04345 cc19cfe5e89e9555a57b50d1c25833c9 139 PRINTS PR00103 cAMP-dependent protein kinase signature 73 84 2.3E-5 T 31-10-2018 DY252_04345 cc19cfe5e89e9555a57b50d1c25833c9 139 SMART SM00100 1 113 2.1E-14 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_04345 cc19cfe5e89e9555a57b50d1c25833c9 139 SUPERFAMILY SSF51206 10 121 1.57E-28 T 31-10-2018 IPR018490 Cyclic nucleotide-binding-like DY252_04345 cc19cfe5e89e9555a57b50d1c25833c9 139 Pfam PF00027 Cyclic nucleotide-binding domain 14 98 1.5E-24 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_04345 cc19cfe5e89e9555a57b50d1c25833c9 139 Gene3D G3DSA:2.60.120.10 7 130 6.7E-31 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_21415 a9e7148e3ef4dc08e4df83fb90353634 319 Pfam PF08401 Domain of unknown function (DUF1738) 19 135 2.8E-35 T 31-10-2018 IPR013610 Domain of unknown function DUF1738 DY252_21415 a9e7148e3ef4dc08e4df83fb90353634 319 PIRSF PIRSF037112 6 318 1.7E-111 T 31-10-2018 IPR017113 Antirestriction, ArdC DY252_12095 875b35cd80a81e15ba009e0d043a226b 285 ProSitePatterns PS00770 Aminotransferases class-IV signature. 181 210 - T 31-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 DY252_12095 875b35cd80a81e15ba009e0d043a226b 285 Pfam PF01063 Amino-transferase class IV 29 255 4.6E-48 T 31-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DY252_12095 875b35cd80a81e15ba009e0d043a226b 285 Gene3D G3DSA:3.30.470.10 1 119 2.2E-34 T 31-10-2018 DY252_12095 875b35cd80a81e15ba009e0d043a226b 285 Gene3D G3DSA:3.20.10.10 125 274 3.1E-38 T 31-10-2018 DY252_12095 875b35cd80a81e15ba009e0d043a226b 285 SUPERFAMILY SSF56752 2 262 2.49E-64 T 31-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DY252_18455 654c98548e21452c018a9d9c94bcc07f 135 SMART SM00363 8 70 5.8E-6 T 31-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_18455 654c98548e21452c018a9d9c94bcc07f 135 PIRSF PIRSF016821 5 134 1.5E-38 T 31-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 DY252_18455 654c98548e21452c018a9d9c94bcc07f 135 Gene3D G3DSA:3.10.290.10 1 107 3.4E-35 T 31-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DY252_18455 654c98548e21452c018a9d9c94bcc07f 135 SUPERFAMILY SSF55174 6 96 1.44E-24 T 31-10-2018 DY252_18455 654c98548e21452c018a9d9c94bcc07f 135 Pfam PF01479 S4 domain 9 54 4.3E-11 T 31-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_04160 3accdb1fc65437557b0c3f4764b8b203 648 SUPERFAMILY SSF55785 17 123 1.45E-8 T 31-10-2018 IPR035965 PAS domain superfamily DY252_04160 3accdb1fc65437557b0c3f4764b8b203 648 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 164 285 3.5E-19 T 31-10-2018 IPR000014 PAS domain DY252_04160 3accdb1fc65437557b0c3f4764b8b203 648 SMART SM00091 159 225 4.0E-8 T 31-10-2018 IPR000014 PAS domain DY252_04160 3accdb1fc65437557b0c3f4764b8b203 648 SMART SM00091 16 81 2.0 T 31-10-2018 IPR000014 PAS domain DY252_04160 3accdb1fc65437557b0c3f4764b8b203 648 Gene3D G3DSA:3.40.50.300 305 490 6.5E-67 T 31-10-2018 DY252_04160 3accdb1fc65437557b0c3f4764b8b203 648 Gene3D G3DSA:3.30.450.20 149 276 7.5E-29 T 31-10-2018 DY252_04160 3accdb1fc65437557b0c3f4764b8b203 648 Pfam PF00158 Sigma-54 interaction domain 319 486 1.2E-71 T 31-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DY252_04160 3accdb1fc65437557b0c3f4764b8b203 648 SUPERFAMILY SSF52540 318 556 7.25E-74 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_04160 3accdb1fc65437557b0c3f4764b8b203 648 Pfam PF13426 PAS domain 35 123 0.0016 T 31-10-2018 IPR000014 PAS domain DY252_04160 3accdb1fc65437557b0c3f4764b8b203 648 Pfam PF13426 PAS domain 170 277 1.4E-14 T 31-10-2018 IPR000014 PAS domain DY252_04160 3accdb1fc65437557b0c3f4764b8b203 648 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 343 356 - T 31-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DY252_04160 3accdb1fc65437557b0c3f4764b8b203 648 Gene3D G3DSA:1.10.10.60 570 640 1.3E-7 T 31-10-2018 DY252_04160 3accdb1fc65437557b0c3f4764b8b203 648 Gene3D G3DSA:3.30.450.20 15 124 3.0E-8 T 31-10-2018 DY252_04160 3accdb1fc65437557b0c3f4764b8b203 648 SUPERFAMILY SSF55785 144 276 9.25E-25 T 31-10-2018 IPR035965 PAS domain superfamily DY252_04160 3accdb1fc65437557b0c3f4764b8b203 648 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 405 420 - T 31-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DY252_04160 3accdb1fc65437557b0c3f4764b8b203 648 SMART SM00382 339 483 2.9E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_04160 3accdb1fc65437557b0c3f4764b8b203 648 Gene3D G3DSA:1.10.8.60 491 564 1.1E-22 T 31-10-2018 DY252_01010 43527895172f857e0faf4d7a77fcbec8 274 Pfam PF00005 ABC transporter 26 159 5.4E-23 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_01010 43527895172f857e0faf4d7a77fcbec8 274 Gene3D G3DSA:3.40.50.300 3 244 1.7E-52 T 31-10-2018 DY252_01010 43527895172f857e0faf4d7a77fcbec8 274 SUPERFAMILY SSF52540 3 222 5.83E-48 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_01010 43527895172f857e0faf4d7a77fcbec8 274 SMART SM00382 29 207 2.1E-5 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_01010 43527895172f857e0faf4d7a77fcbec8 274 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_08810 6317e6a50dd21dfd1fb84fd8d8a703f6 112 Pfam PF00581 Rhodanese-like domain 11 103 3.2E-15 T 31-10-2018 IPR001763 Rhodanese-like domain DY252_08810 6317e6a50dd21dfd1fb84fd8d8a703f6 112 SMART SM00450 9 107 6.1E-17 T 31-10-2018 IPR001763 Rhodanese-like domain DY252_08810 6317e6a50dd21dfd1fb84fd8d8a703f6 112 SUPERFAMILY SSF52821 5 111 4.19E-25 T 31-10-2018 IPR036873 Rhodanese-like domain superfamily DY252_08810 6317e6a50dd21dfd1fb84fd8d8a703f6 112 Gene3D G3DSA:3.40.250.10 8 112 6.3E-23 T 31-10-2018 IPR036873 Rhodanese-like domain superfamily DY252_13325 187a6da0bc6918ed929f28a533b53482 339 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 37 101 2.7E-15 T 31-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 DY252_13325 187a6da0bc6918ed929f28a533b53482 339 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 279 307 - T 31-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DY252_13325 187a6da0bc6918ed929f28a533b53482 339 SUPERFAMILY SSF51161 48 328 3.51E-76 T 31-10-2018 IPR011004 Trimeric LpxA-like superfamily DY252_13325 187a6da0bc6918ed929f28a533b53482 339 Gene3D G3DSA:2.160.10.10 113 319 1.0E-59 T 31-10-2018 DY252_13325 187a6da0bc6918ed929f28a533b53482 339 Gene3D G3DSA:3.40.1390.10 8 109 3.0E-14 T 31-10-2018 DY252_13325 187a6da0bc6918ed929f28a533b53482 339 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 31 338 1.2E-104 T 31-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 DY252_13325 187a6da0bc6918ed929f28a533b53482 339 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 234 269 2.0E-7 T 31-10-2018 IPR001451 Hexapeptide repeat DY252_13325 187a6da0bc6918ed929f28a533b53482 339 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 122 156 7.2E-10 T 31-10-2018 IPR001451 Hexapeptide repeat DY252_13325 187a6da0bc6918ed929f28a533b53482 339 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 14 337 33.842 T 31-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 DY252_13325 187a6da0bc6918ed929f28a533b53482 339 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 131 159 - T 31-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DY252_17550 85f4f14c742fc36b1385e8ce3cf9e33b 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 3 260 2.8E-106 T 31-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 DY252_17550 85f4f14c742fc36b1385e8ce3cf9e33b 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 260 2.1E-26 T 31-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DY252_17550 85f4f14c742fc36b1385e8ce3cf9e33b 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 4.1E-44 T 31-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DY252_17550 85f4f14c742fc36b1385e8ce3cf9e33b 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 3.7E-33 T 31-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DY252_17550 85f4f14c742fc36b1385e8ce3cf9e33b 261 SUPERFAMILY SSF117143 93 222 8.5E-34 T 31-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DY252_17550 85f4f14c742fc36b1385e8ce3cf9e33b 261 Pfam PF00460 Flagella basal body rod protein 4 34 5.5E-9 T 31-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DY252_13220 c1db858dfa46bec8dc008363bf48bbcb 113 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 77 1.4E-18 T 31-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DY252_13220 c1db858dfa46bec8dc008363bf48bbcb 113 PRINTS PR01651 Protein-export SecG membrane protein signature 59 81 4.8E-14 T 31-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DY252_13220 c1db858dfa46bec8dc008363bf48bbcb 113 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 4.8E-14 T 31-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DY252_13220 c1db858dfa46bec8dc008363bf48bbcb 113 Pfam PF03840 Preprotein translocase SecG subunit 4 77 1.3E-17 T 31-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DY252_04485 096d7cf1a042f5f98549bf755713e4a7 237 Gene3D G3DSA:3.40.50.300 4 208 8.0E-45 T 31-10-2018 DY252_04485 096d7cf1a042f5f98549bf755713e4a7 237 SUPERFAMILY SSF52540 8 190 3.15E-43 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_04485 096d7cf1a042f5f98549bf755713e4a7 237 SMART SM00382 28 207 1.8E-8 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_04485 096d7cf1a042f5f98549bf755713e4a7 237 Pfam PF00005 ABC transporter 21 160 1.3E-27 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_04485 096d7cf1a042f5f98549bf755713e4a7 237 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 6 202 5.1E-61 T 31-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 DY252_05255 998a0500ae892838e87f80e72feac118 231 SUPERFAMILY SSF55469 26 230 3.93E-42 T 31-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DY252_05255 998a0500ae892838e87f80e72feac118 231 Pfam PF00881 Nitroreductase family 38 207 1.2E-22 T 31-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DY252_05255 998a0500ae892838e87f80e72feac118 231 Gene3D G3DSA:3.40.109.10 16 230 2.1E-53 T 31-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DY252_19415 c1754eeb8eda007662280dcba2e92bad 336 Gene3D G3DSA:3.40.50.2300 136 270 1.5E-102 T 31-10-2018 DY252_19415 c1754eeb8eda007662280dcba2e92bad 336 SUPERFAMILY SSF53822 31 334 1.39E-60 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_19415 c1754eeb8eda007662280dcba2e92bad 336 Pfam PF13407 Periplasmic binding protein domain 35 291 5.2E-48 T 31-10-2018 IPR025997 Periplasmic binding protein DY252_19415 c1754eeb8eda007662280dcba2e92bad 336 Gene3D G3DSA:3.40.50.2300 33 309 1.5E-102 T 31-10-2018 DY252_00165 16aec3f7a11052ea01e4d205f164fae5 301 Gene3D G3DSA:3.40.50.720 19 292 8.5E-83 T 31-10-2018 DY252_00165 16aec3f7a11052ea01e4d205f164fae5 301 Gene3D G3DSA:3.40.50.720 94 278 8.5E-83 T 31-10-2018 DY252_00165 16aec3f7a11052ea01e4d205f164fae5 301 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 277 7.2E-49 T 31-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DY252_00165 16aec3f7a11052ea01e4d205f164fae5 301 SUPERFAMILY SSF51735 97 278 9.4E-48 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_10280 bf3db25cc3a56e8ec0ca678ed31b674b 336 Gene3D G3DSA:2.40.30.170 39 268 1.5E-40 T 31-10-2018 DY252_10280 bf3db25cc3a56e8ec0ca678ed31b674b 336 Gene3D G3DSA:1.10.287.470 80 185 1.5E-40 T 31-10-2018 DY252_10280 bf3db25cc3a56e8ec0ca678ed31b674b 336 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 275 1.5E-17 T 31-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DY252_10280 bf3db25cc3a56e8ec0ca678ed31b674b 336 Gene3D G3DSA:2.40.50.100 46 220 1.5E-40 T 31-10-2018 DY252_10280 bf3db25cc3a56e8ec0ca678ed31b674b 336 SUPERFAMILY SSF111369 41 231 6.41E-13 T 31-10-2018 DY252_20435 89957e2fcdd155c3fc6226c993f0eabb 244 PIRSF PIRSF029033 1 244 4.3E-63 T 31-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein DY252_20435 89957e2fcdd155c3fc6226c993f0eabb 244 Pfam PF04402 Protein of unknown function (DUF541) 41 231 3.7E-20 T 31-10-2018 IPR007497 Protein of unknown function DUF541 DY252_07060 598f026a22efafa315d1d597657d2362 254 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 238 32.816 T 31-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DY252_07060 598f026a22efafa315d1d597657d2362 254 Gene3D G3DSA:3.30.470.20 85 224 1.7E-95 T 31-10-2018 DY252_07060 598f026a22efafa315d1d597657d2362 254 Gene3D G3DSA:3.30.200.20 6 235 1.7E-95 T 31-10-2018 DY252_07060 598f026a22efafa315d1d597657d2362 254 Pfam PF01259 SAICAR synthetase 7 235 6.7E-64 T 31-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DY252_07060 598f026a22efafa315d1d597657d2362 254 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 31-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DY252_07060 598f026a22efafa315d1d597657d2362 254 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 238 5.0E-69 T 31-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 DY252_07060 598f026a22efafa315d1d597657d2362 254 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 31-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DY252_07060 598f026a22efafa315d1d597657d2362 254 SUPERFAMILY SSF56104 4 236 3.92E-80 T 31-10-2018 DY252_01915 9092c78450281018dc3907d5573e5e4f 521 Gene3D G3DSA:1.20.1250.20 319 515 2.3E-12 T 31-10-2018 DY252_01915 9092c78450281018dc3907d5573e5e4f 521 Gene3D G3DSA:1.20.1250.20 17 223 1.1E-8 T 31-10-2018 DY252_01915 9092c78450281018dc3907d5573e5e4f 521 SUPERFAMILY SSF103473 17 304 4.71E-15 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_01915 9092c78450281018dc3907d5573e5e4f 521 Pfam PF07690 Major Facilitator Superfamily 333 517 9.9E-13 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_01915 9092c78450281018dc3907d5573e5e4f 521 SUPERFAMILY SSF103473 325 513 2.88E-15 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_01915 9092c78450281018dc3907d5573e5e4f 521 Pfam PF13000 Acetyl-coenzyme A transporter 1 26 106 3.0E-8 T 31-10-2018 IPR024371 Acetyl-coenzyme A transporter 1-like GO:0008521|GO:0016021 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 DY252_17010 8c60f53e959c4891321452c43e806c29 304 SUPERFAMILY SSF53335 32 301 9.36E-33 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_17010 8c60f53e959c4891321452c43e806c29 304 Gene3D G3DSA:3.40.50.150 3 265 5.9E-37 T 31-10-2018 DY252_17010 8c60f53e959c4891321452c43e806c29 304 Pfam PF01209 ubiE/COQ5 methyltransferase family 62 178 3.7E-20 T 31-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DY252_18845 47c7e73be2ca09fc333b57b0e2159d56 387 Pfam PF07690 Major Facilitator Superfamily 24 353 5.6E-25 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_18845 47c7e73be2ca09fc333b57b0e2159d56 387 Gene3D G3DSA:1.20.1250.20 14 385 5.0E-33 T 31-10-2018 DY252_18845 47c7e73be2ca09fc333b57b0e2159d56 387 SUPERFAMILY SSF103473 17 385 3.01E-42 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_05810 d33e22cd3bbbd558876bf164f2210696 1133 SUPERFAMILY SSF63829 664 861 1.44E-5 T 31-10-2018 DY252_05810 d33e22cd3bbbd558876bf164f2210696 1133 SMART SM00706 915 949 22.0 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_05810 d33e22cd3bbbd558876bf164f2210696 1133 SMART SM00706 796 830 290.0 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_05810 d33e22cd3bbbd558876bf164f2210696 1133 SMART SM00706 1060 1093 16.0 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_05810 d33e22cd3bbbd558876bf164f2210696 1133 SMART SM00706 648 681 110.0 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_05810 d33e22cd3bbbd558876bf164f2210696 1133 SMART SM00706 832 867 1.3 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_05810 d33e22cd3bbbd558876bf164f2210696 1133 SMART SM00706 1025 1059 0.02 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_05810 d33e22cd3bbbd558876bf164f2210696 1133 SMART SM00706 760 795 0.1 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_05810 d33e22cd3bbbd558876bf164f2210696 1133 SUPERFAMILY SSF57184 35 243 4.93E-7 T 31-10-2018 IPR009030 Growth factor receptor cysteine-rich domain superfamily DY252_00960 f711026b378b86bff37661a0ed44324c 827 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 573 9.9E-26 T 31-10-2018 DY252_00960 f711026b378b86bff37661a0ed44324c 827 TIGRFAM TIGR01647 ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 24 768 2.6E-287 T 31-10-2018 IPR006534 P-type ATPase, subfamily IIIA GO:0008553|GO:0016021|GO:0120029 KEGG: 00190+3.6.3.6 DY252_00960 f711026b378b86bff37661a0ed44324c 827 SUPERFAMILY SSF81660 335 469 9.48E-6 T 31-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DY252_00960 f711026b378b86bff37661a0ed44324c 827 Gene3D G3DSA:2.60.120.1500 117 207 9.6E-34 T 31-10-2018 DY252_00960 f711026b378b86bff37661a0ed44324c 827 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 533 647 1.4E-29 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_00960 f711026b378b86bff37661a0ed44324c 827 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 83 506 8.8E-59 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_00960 f711026b378b86bff37661a0ed44324c 827 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 313 319 - T 31-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DY252_00960 f711026b378b86bff37661a0ed44324c 827 SMART SM00831 9 77 1.7E-15 T 31-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DY252_00960 f711026b378b86bff37661a0ed44324c 827 Gene3D G3DSA:1.20.1110.10 54 116 3.3E-16 T 31-10-2018 DY252_00960 f711026b378b86bff37661a0ed44324c 827 Gene3D G3DSA:1.20.1110.10 530 803 2.7E-63 T 31-10-2018 DY252_00960 f711026b378b86bff37661a0ed44324c 827 Gene3D G3DSA:1.20.1110.10 208 312 4.7E-8 T 31-10-2018 DY252_00960 f711026b378b86bff37661a0ed44324c 827 SUPERFAMILY SSF56784 309 653 1.21E-40 T 31-10-2018 IPR036412 HAD-like superfamily DY252_00960 f711026b378b86bff37661a0ed44324c 827 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 590 615 1.4E-41 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_00960 f711026b378b86bff37661a0ed44324c 827 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 721 742 1.4E-41 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_00960 f711026b378b86bff37661a0ed44324c 827 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 559 575 1.4E-41 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_00960 f711026b378b86bff37661a0ed44324c 827 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 429 447 1.4E-41 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_00960 f711026b378b86bff37661a0ed44324c 827 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 531 547 1.4E-41 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_00960 f711026b378b86bff37661a0ed44324c 827 Gene3D G3DSA:3.40.1110.10 326 460 8.6E-29 T 31-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DY252_00960 f711026b378b86bff37661a0ed44324c 827 SUPERFAMILY SSF81665 15 804 6.8E-87 T 31-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DY252_00960 f711026b378b86bff37661a0ed44324c 827 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 1.1E-39 T 31-10-2018 DY252_00960 f711026b378b86bff37661a0ed44324c 827 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 559 578 1.1E-39 T 31-10-2018 DY252_00960 f711026b378b86bff37661a0ed44324c 827 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 162 176 1.1E-39 T 31-10-2018 DY252_00960 f711026b378b86bff37661a0ed44324c 827 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 582 594 1.1E-39 T 31-10-2018 DY252_00960 f711026b378b86bff37661a0ed44324c 827 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 481 491 1.1E-39 T 31-10-2018 DY252_00960 f711026b378b86bff37661a0ed44324c 827 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 459 470 1.1E-39 T 31-10-2018 DY252_00960 f711026b378b86bff37661a0ed44324c 827 Gene3D G3DSA:3.40.50.1000 461 525 2.1E-6 T 31-10-2018 IPR023214 HAD superfamily DY252_00960 f711026b378b86bff37661a0ed44324c 827 Pfam PF00690 Cation transporter/ATPase, N-terminus 17 72 1.4E-11 T 31-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DY252_00960 f711026b378b86bff37661a0ed44324c 827 SUPERFAMILY SSF81653 115 212 1.2E-28 T 31-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DY252_00960 f711026b378b86bff37661a0ed44324c 827 Pfam PF00122 E1-E2 ATPase 113 290 5.3E-54 T 31-10-2018 DY252_08910 cf522c7df1e5f81820232d46c697feb8 176 Pfam PF00467 KOW motif 126 155 2.0E-5 T 31-10-2018 IPR005824 KOW DY252_08910 cf522c7df1e5f81820232d46c697feb8 176 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 176 23.854 T 31-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DY252_08910 cf522c7df1e5f81820232d46c697feb8 176 Pfam PF02357 Transcription termination factor nusG 4 107 6.0E-27 T 31-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DY252_08910 cf522c7df1e5f81820232d46c697feb8 176 ProSitePatterns PS01014 Transcription termination factor nusG signature. 159 168 - T 31-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site DY252_08910 cf522c7df1e5f81820232d46c697feb8 176 SUPERFAMILY SSF50104 121 176 8.27E-18 T 31-10-2018 IPR008991 Translation protein SH3-like domain superfamily DY252_08910 cf522c7df1e5f81820232d46c697feb8 176 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 2.5E-19 T 31-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DY252_08910 cf522c7df1e5f81820232d46c697feb8 176 PRINTS PR00338 Transcription termination factor NUSG signature 134 149 2.5E-19 T 31-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DY252_08910 cf522c7df1e5f81820232d46c697feb8 176 PRINTS PR00338 Transcription termination factor NUSG signature 152 168 2.5E-19 T 31-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DY252_08910 cf522c7df1e5f81820232d46c697feb8 176 SUPERFAMILY SSF82679 3 112 5.75E-37 T 31-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DY252_08910 cf522c7df1e5f81820232d46c697feb8 176 Gene3D G3DSA:3.30.70.940 1 116 1.2E-41 T 31-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DY252_08910 cf522c7df1e5f81820232d46c697feb8 176 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 2.0E-67 T 31-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DY252_08910 cf522c7df1e5f81820232d46c697feb8 176 SMART SM00738 2 110 2.4E-47 T 31-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DY252_08910 cf522c7df1e5f81820232d46c697feb8 176 SMART SM00739 122 149 0.0014 T 31-10-2018 IPR005824 KOW DY252_08910 cf522c7df1e5f81820232d46c697feb8 176 Gene3D G3DSA:2.30.30.30 117 176 7.8E-25 T 31-10-2018 IPR014722 Ribosomal protein L2, domain 2 DY252_08325 08749bbbef3a666eb7e4a694dbde2fc4 538 SUPERFAMILY SSF117457 359 533 9.94E-62 T 31-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 DY252_08325 08749bbbef3a666eb7e4a694dbde2fc4 538 Pfam PF05683 Fumarase C-terminus 330 535 2.6E-93 T 31-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 DY252_08325 08749bbbef3a666eb7e4a694dbde2fc4 538 Pfam PF05681 Fumarate hydratase (Fumerase) 48 322 3.3E-89 T 31-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 DY252_08325 08749bbbef3a666eb7e4a694dbde2fc4 538 PIRSF PIRSF001394 28 537 2.4E-219 T 31-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 DY252_08325 08749bbbef3a666eb7e4a694dbde2fc4 538 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 370 535 4.0E-57 T 31-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 DY252_08325 08749bbbef3a666eb7e4a694dbde2fc4 538 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 66 321 1.2E-34 T 31-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 DY252_08325 08749bbbef3a666eb7e4a694dbde2fc4 538 ProSitePatterns PS00163 Fumarate lyases signature. 454 463 - T 31-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DY252_08325 08749bbbef3a666eb7e4a694dbde2fc4 538 Gene3D G3DSA:3.20.130.10 346 534 2.0E-58 T 31-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 DY252_05720 63ce457bb897aaa0e44f799c98a7957f 161 Pfam PF06891 P2 phage tail completion protein R (GpR) 21 144 9.4E-21 T 31-10-2018 IPR009678 Bacteriophage tail completion protein R DY252_14085 466e2349917b8ac4774bd7d061001127 388 Gene3D G3DSA:3.50.50.60 5 349 2.7E-166 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_14085 466e2349917b8ac4774bd7d061001127 388 Pfam PF01494 FAD binding domain 3 341 2.7E-86 T 31-10-2018 IPR002938 FAD-binding domain GO:0071949 DY252_14085 466e2349917b8ac4774bd7d061001127 388 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 1 388 1.1E-190 T 31-10-2018 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 DY252_14085 466e2349917b8ac4774bd7d061001127 388 SUPERFAMILY SSF54373 173 273 3.22E-42 T 31-10-2018 DY252_14085 466e2349917b8ac4774bd7d061001127 388 SUPERFAMILY SSF51905 1 387 3.65E-55 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_14085 466e2349917b8ac4774bd7d061001127 388 Gene3D G3DSA:3.30.9.10 73 385 2.7E-166 T 31-10-2018 DY252_14085 466e2349917b8ac4774bd7d061001127 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 307 3.1E-27 T 31-10-2018 DY252_14085 466e2349917b8ac4774bd7d061001127 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 3.1E-27 T 31-10-2018 DY252_14085 466e2349917b8ac4774bd7d061001127 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 3.1E-27 T 31-10-2018 DY252_14085 466e2349917b8ac4774bd7d061001127 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 276 291 3.1E-27 T 31-10-2018 DY252_09570 d46daa3a32fed2f383425e7d1edf8d56 639 Gene3D G3DSA:3.40.50.920 499 630 2.4E-34 T 31-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DY252_09570 d46daa3a32fed2f383425e7d1edf8d56 639 Gene3D G3DSA:3.40.50.970 320 494 1.2E-62 T 31-10-2018 DY252_09570 d46daa3a32fed2f383425e7d1edf8d56 639 ProSitePatterns PS00802 Transketolase signature 2. 428 444 - T 31-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DY252_09570 d46daa3a32fed2f383425e7d1edf8d56 639 SUPERFAMILY SSF52518 299 483 4.21E-60 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_09570 d46daa3a32fed2f383425e7d1edf8d56 639 SUPERFAMILY SSF52922 495 630 8.77E-33 T 31-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DY252_09570 d46daa3a32fed2f383425e7d1edf8d56 639 SMART SM00861 322 487 9.8E-63 T 31-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DY252_09570 d46daa3a32fed2f383425e7d1edf8d56 639 SUPERFAMILY SSF52518 7 353 4.31E-79 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_09570 d46daa3a32fed2f383425e7d1edf8d56 639 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 631 44.486 T 31-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DY252_09570 d46daa3a32fed2f383425e7d1edf8d56 639 Pfam PF02779 Transketolase, pyrimidine binding domain 322 482 4.5E-37 T 31-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DY252_09570 d46daa3a32fed2f383425e7d1edf8d56 639 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 285 2.5E-118 T 31-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DY252_09570 d46daa3a32fed2f383425e7d1edf8d56 639 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 31-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DY252_09570 d46daa3a32fed2f383425e7d1edf8d56 639 Pfam PF02780 Transketolase, C-terminal domain 499 622 1.9E-26 T 31-10-2018 IPR033248 Transketolase, C-terminal domain DY252_09570 d46daa3a32fed2f383425e7d1edf8d56 639 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 625 1.1E-245 T 31-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DY252_19760 c90bed4f4ba9c55ebc82283490ee0392 114 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 100 22.025 T 31-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DY252_19760 c90bed4f4ba9c55ebc82283490ee0392 114 SUPERFAMILY SSF81301 2 101 8.01E-34 T 31-10-2018 DY252_19760 c90bed4f4ba9c55ebc82283490ee0392 114 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 3 99 1.1E-33 T 31-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DY252_19760 c90bed4f4ba9c55ebc82283490ee0392 114 Pfam PF02410 Ribosomal silencing factor during starvation 5 99 5.6E-26 T 31-10-2018 DY252_19760 c90bed4f4ba9c55ebc82283490ee0392 114 Gene3D G3DSA:3.30.460.10 1 112 4.2E-36 T 31-10-2018 DY252_10000 2063ec6e3ec65c1549c8b0c64cab3eb7 213 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 7 209 21.953 T 31-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_10000 2063ec6e3ec65c1549c8b0c64cab3eb7 213 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 145 210 2.4E-5 T 31-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 DY252_10000 2063ec6e3ec65c1549c8b0c64cab3eb7 213 SUPERFAMILY SSF51391 6 202 5.49E-56 T 31-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_10000 2063ec6e3ec65c1549c8b0c64cab3eb7 213 Pfam PF02581 Thiamine monophosphate synthase 9 188 1.0E-49 T 31-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_10000 2063ec6e3ec65c1549c8b0c64cab3eb7 213 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 9 199 2.4E-50 T 31-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_10000 2063ec6e3ec65c1549c8b0c64cab3eb7 213 Gene3D G3DSA:3.20.20.70 2 212 4.4E-55 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_04770 07e8da7ae2118dfdf2dbf72cf67dced4 653 Gene3D G3DSA:3.90.780.10 434 608 5.0E-59 T 31-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_04770 07e8da7ae2118dfdf2dbf72cf67dced4 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 375 571 1.7E-21 T 31-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_04770 07e8da7ae2118dfdf2dbf72cf67dced4 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 119 130 - T 31-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_04770 07e8da7ae2118dfdf2dbf72cf67dced4 653 Pfam PF00149 Calcineurin-like phosphoesterase 33 276 3.6E-12 T 31-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DY252_04770 07e8da7ae2118dfdf2dbf72cf67dced4 653 SUPERFAMILY SSF56300 27 372 1.2E-86 T 31-10-2018 DY252_04770 07e8da7ae2118dfdf2dbf72cf67dced4 653 PRINTS PR01607 Apyrase family signature 231 248 5.7E-27 T 31-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_04770 07e8da7ae2118dfdf2dbf72cf67dced4 653 PRINTS PR01607 Apyrase family signature 546 565 5.7E-27 T 31-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_04770 07e8da7ae2118dfdf2dbf72cf67dced4 653 PRINTS PR01607 Apyrase family signature 445 468 5.7E-27 T 31-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_04770 07e8da7ae2118dfdf2dbf72cf67dced4 653 PRINTS PR01607 Apyrase family signature 299 319 5.7E-27 T 31-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_04770 07e8da7ae2118dfdf2dbf72cf67dced4 653 PRINTS PR01607 Apyrase family signature 31 49 5.7E-27 T 31-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_04770 07e8da7ae2118dfdf2dbf72cf67dced4 653 PRINTS PR01607 Apyrase family signature 259 282 5.7E-27 T 31-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_04770 07e8da7ae2118dfdf2dbf72cf67dced4 653 SUPERFAMILY SSF55816 375 610 1.96E-42 T 31-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DY252_04770 07e8da7ae2118dfdf2dbf72cf67dced4 653 Gene3D G3DSA:3.60.21.10 26 373 3.7E-130 T 31-10-2018 IPR029052 Metallo-dependent phosphatase-like DY252_13840 728eec473616370fd52a5030206fb75e 169 Pfam PF13302 Acetyltransferase (GNAT) domain 7 146 2.1E-24 T 31-10-2018 IPR000182 GNAT domain DY252_13840 728eec473616370fd52a5030206fb75e 169 SUPERFAMILY SSF55729 2 148 2.75E-33 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_13840 728eec473616370fd52a5030206fb75e 169 Gene3D G3DSA:3.40.630.30 1 162 3.0E-37 T 31-10-2018 DY252_12145 bff0a2791d846144e6b1fc85fdbb0a57 278 SUPERFAMILY SSF46785 96 170 3.41E-24 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_12145 bff0a2791d846144e6b1fc85fdbb0a57 278 SUPERFAMILY SSF46785 21 87 1.94E-12 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_12145 bff0a2791d846144e6b1fc85fdbb0a57 278 Gene3D G3DSA:1.10.10.10 91 189 6.3E-33 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_12145 bff0a2791d846144e6b1fc85fdbb0a57 278 Gene3D G3DSA:1.10.10.10 18 90 9.0E-7 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_12145 bff0a2791d846144e6b1fc85fdbb0a57 278 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 24 183 7.1E-32 T 31-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DY252_12145 bff0a2791d846144e6b1fc85fdbb0a57 278 Pfam PF04079 Segregation and condensation complex subunit ScpB 24 178 1.2E-47 T 31-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DY252_03105 6111573bed71d8f8a99117bf2c97ef2f 127 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 16 119 5.2E-23 T 31-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 DY252_03105 6111573bed71d8f8a99117bf2c97ef2f 127 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 113 2.9E-16 T 31-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_03105 6111573bed71d8f8a99117bf2c97ef2f 127 Gene3D G3DSA:1.20.1300.10 11 123 1.9E-26 T 31-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_03105 6111573bed71d8f8a99117bf2c97ef2f 127 SUPERFAMILY SSF81343 11 122 4.41E-25 T 31-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DY252_11720 6617f7228e1aea16c9912feb3fd78275 192 SUPERFAMILY SSF57716 142 190 2.09E-16 T 31-10-2018 DY252_11720 6617f7228e1aea16c9912feb3fd78275 192 Gene3D G3DSA:3.40.50.300 1 140 7.0E-26 T 31-10-2018 DY252_11720 6617f7228e1aea16c9912feb3fd78275 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.764 T 31-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DY252_11720 6617f7228e1aea16c9912feb3fd78275 192 Gene3D G3DSA:3.30.60.20 143 187 1.2E-7 T 31-10-2018 DY252_11720 6617f7228e1aea16c9912feb3fd78275 192 Pfam PF00265 Thymidine kinase 3 186 9.0E-54 T 31-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DY252_11720 6617f7228e1aea16c9912feb3fd78275 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 31-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DY252_11720 6617f7228e1aea16c9912feb3fd78275 192 SUPERFAMILY SSF52540 1 141 5.8E-42 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_11720 6617f7228e1aea16c9912feb3fd78275 192 PIRSF PIRSF035805 1 192 1.2E-55 T 31-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DY252_21285 e4758412e500f186272c8d14ddbe5b8c 1088 Pfam PF01555 DNA methylase 506 810 5.7E-14 T 31-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 DY252_21285 e4758412e500f186272c8d14ddbe5b8c 1088 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 790 804 2.1E-5 T 31-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 DY252_21285 e4758412e500f186272c8d14ddbe5b8c 1088 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 506 518 2.1E-5 T 31-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 DY252_21285 e4758412e500f186272c8d14ddbe5b8c 1088 SUPERFAMILY SSF53335 484 837 4.3E-27 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_15345 23ad256b5d74db345f2287cce9875360 432 Pfam PF13360 PQQ-like domain 115 351 3.2E-55 T 31-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat DY252_15345 23ad256b5d74db345f2287cce9875360 432 SUPERFAMILY SSF50998 57 423 8.9E-67 T 31-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DY252_15345 23ad256b5d74db345f2287cce9875360 432 Gene3D G3DSA:2.130.10.10 69 432 3.8E-79 T 31-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DY252_15345 23ad256b5d74db345f2287cce9875360 432 SMART SM00564 284 315 0.67 T 31-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DY252_15345 23ad256b5d74db345f2287cce9875360 432 SMART SM00564 233 264 16.0 T 31-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DY252_15345 23ad256b5d74db345f2287cce9875360 432 SMART SM00564 147 179 250.0 T 31-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DY252_15345 23ad256b5d74db345f2287cce9875360 432 SMART SM00564 188 219 24.0 T 31-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DY252_15345 23ad256b5d74db345f2287cce9875360 432 SMART SM00564 100 132 300.0 T 31-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DY252_15345 23ad256b5d74db345f2287cce9875360 432 SMART SM00564 372 403 87.0 T 31-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DY252_16290 05f5f84c81f76edcf1bf7526a5088898 174 Pfam PF08281 Sigma-70, region 4 113 165 1.1E-14 T 31-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DY252_16290 05f5f84c81f76edcf1bf7526a5088898 174 SUPERFAMILY SSF88659 96 171 2.14E-15 T 31-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DY252_16290 05f5f84c81f76edcf1bf7526a5088898 174 SUPERFAMILY SSF88946 6 89 5.49E-13 T 31-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DY252_16290 05f5f84c81f76edcf1bf7526a5088898 174 Pfam PF04542 Sigma-70 region 2 11 78 5.5E-12 T 31-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DY252_16290 05f5f84c81f76edcf1bf7526a5088898 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 168 5.5E-26 T 31-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DY252_16290 05f5f84c81f76edcf1bf7526a5088898 174 Gene3D G3DSA:1.10.1740.10 4 74 4.3E-9 T 31-10-2018 DY252_16290 05f5f84c81f76edcf1bf7526a5088898 174 Gene3D G3DSA:1.10.10.10 87 173 7.4E-17 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_11320 ef4b784b18ee82f55d70893890f9fd89 163 Pfam PF13673 Acetyltransferase (GNAT) domain 52 158 1.4E-16 T 31-10-2018 IPR000182 GNAT domain DY252_11320 ef4b784b18ee82f55d70893890f9fd89 163 SUPERFAMILY SSF55729 13 161 1.77E-29 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_11320 ef4b784b18ee82f55d70893890f9fd89 163 Gene3D G3DSA:3.40.630.30 7 158 1.5E-38 T 31-10-2018 DY252_05640 3235cc16d4e893f0813daff605219934 324 Pfam PF05954 Phage late control gene D protein (GPD) 104 311 4.4E-14 T 31-10-2018 DY252_05640 3235cc16d4e893f0813daff605219934 324 SUPERFAMILY SSF69279 4 175 2.89E-19 T 31-10-2018 DY252_06970 e141fc93caa53217f70b59e0e922da22 506 SUPERFAMILY SSF53383 139 500 2.23E-85 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_06970 e141fc93caa53217f70b59e0e922da22 506 Gene3D G3DSA:3.40.640.10 132 496 1.1E-112 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_06970 e141fc93caa53217f70b59e0e922da22 506 Gene3D G3DSA:1.10.10.10 23 131 2.6E-21 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_06970 e141fc93caa53217f70b59e0e922da22 506 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 88 6.5E-15 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_06970 e141fc93caa53217f70b59e0e922da22 506 SMART SM00345 29 88 8.5E-13 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_06970 e141fc93caa53217f70b59e0e922da22 506 Pfam PF00155 Aminotransferase class I and II 177 437 1.5E-24 T 31-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DY252_06970 e141fc93caa53217f70b59e0e922da22 506 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 62 8.8E-6 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_06970 e141fc93caa53217f70b59e0e922da22 506 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 62 78 8.8E-6 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_06970 e141fc93caa53217f70b59e0e922da22 506 SUPERFAMILY SSF46785 22 90 3.76E-19 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_04405 630b881a4c0a42156118b7dbdfba0144 309 Gene3D G3DSA:1.10.10.10 5 88 1.6E-20 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_04405 630b881a4c0a42156118b7dbdfba0144 309 Pfam PF03466 LysR substrate binding domain 89 296 1.0E-37 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_04405 630b881a4c0a42156118b7dbdfba0144 309 Gene3D G3DSA:3.40.190.290 93 302 2.6E-32 T 31-10-2018 DY252_04405 630b881a4c0a42156118b7dbdfba0144 309 SUPERFAMILY SSF46785 5 81 1.69E-17 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_04405 630b881a4c0a42156118b7dbdfba0144 309 SUPERFAMILY SSF53850 91 299 9.5E-35 T 31-10-2018 DY252_04405 630b881a4c0a42156118b7dbdfba0144 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 4.8E-17 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_16335 b435bf52d2945278d11d566e4b9b67f3 238 Pfam PF07729 FCD domain 101 225 9.5E-26 T 31-10-2018 IPR011711 GntR, C-terminal DY252_16335 b435bf52d2945278d11d566e4b9b67f3 238 Gene3D G3DSA:1.10.10.10 7 80 1.4E-25 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_16335 b435bf52d2945278d11d566e4b9b67f3 238 SUPERFAMILY SSF46785 7 81 2.38E-23 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_16335 b435bf52d2945278d11d566e4b9b67f3 238 SMART SM00895 99 226 3.2E-19 T 31-10-2018 IPR011711 GntR, C-terminal DY252_16335 b435bf52d2945278d11d566e4b9b67f3 238 SMART SM00345 18 77 1.7E-24 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_16335 b435bf52d2945278d11d566e4b9b67f3 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 2.2E-10 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_16335 b435bf52d2945278d11d566e4b9b67f3 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 2.2E-10 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_16335 b435bf52d2945278d11d566e4b9b67f3 238 Gene3D G3DSA:1.20.120.530 96 238 1.3E-27 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_16335 b435bf52d2945278d11d566e4b9b67f3 238 SUPERFAMILY SSF48008 98 234 1.78E-26 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_16335 b435bf52d2945278d11d566e4b9b67f3 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 7.4E-23 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_11385 cb2bbc3819aaf55a38910db10f3bbd69 623 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 457 607 1.9E-6 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_11385 cb2bbc3819aaf55a38910db10f3bbd69 623 Gene3D G3DSA:3.30.70.1450 337 413 2.2E-16 T 31-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DY252_11385 cb2bbc3819aaf55a38910db10f3bbd69 623 Pfam PF02080 TrkA-C domain 341 408 3.5E-11 T 31-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DY252_11385 cb2bbc3819aaf55a38910db10f3bbd69 623 Pfam PF02080 TrkA-C domain 245 310 4.8E-7 T 31-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DY252_11385 cb2bbc3819aaf55a38910db10f3bbd69 623 SUPERFAMILY SSF116726 338 415 3.92E-17 T 31-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DY252_11385 cb2bbc3819aaf55a38910db10f3bbd69 623 SUPERFAMILY SSF116726 239 313 2.09E-7 T 31-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DY252_11385 cb2bbc3819aaf55a38910db10f3bbd69 623 Pfam PF03600 Citrate transporter 27 453 2.2E-24 T 31-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 DY252_15630 b64fece1b2bfec305c5515e68564d499 360 SUPERFAMILY SSF50331 280 352 1.81E-9 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_15630 b64fece1b2bfec305c5515e68564d499 360 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_15630 b64fece1b2bfec305c5515e68564d499 360 SMART SM00382 28 217 1.1E-16 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_15630 b64fece1b2bfec305c5515e68564d499 360 Gene3D G3DSA:2.40.50.140 294 346 9.9E-8 T 31-10-2018 DY252_15630 b64fece1b2bfec305c5515e68564d499 360 Gene3D G3DSA:2.40.50.940 228 347 9.9E-8 T 31-10-2018 DY252_15630 b64fece1b2bfec305c5515e68564d499 360 Pfam PF08402 TOBE domain 287 350 1.5E-8 T 31-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DY252_15630 b64fece1b2bfec305c5515e68564d499 360 SUPERFAMILY SSF52540 4 244 1.33E-80 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_15630 b64fece1b2bfec305c5515e68564d499 360 Gene3D G3DSA:3.40.50.300 4 227 8.2E-65 T 31-10-2018 DY252_15630 b64fece1b2bfec305c5515e68564d499 360 Pfam PF00005 ABC transporter 20 167 1.5E-32 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_10770 0696e8d74f3f7c3244bf70915fa0c597 656 SUPERFAMILY SSF58104 335 649 7.72E-57 T 31-10-2018 DY252_10770 0696e8d74f3f7c3244bf70915fa0c597 656 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 457 614 1.0E-30 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_10770 0696e8d74f3f7c3244bf70915fa0c597 656 SUPERFAMILY SSF103190 56 184 1.18E-13 T 31-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DY252_10770 0696e8d74f3f7c3244bf70915fa0c597 656 Pfam PF14827 Double sensory domain of two-component sensor kinase 43 273 2.7E-35 T 31-10-2018 IPR029150 Double Cache domain 3 DY252_10770 0696e8d74f3f7c3244bf70915fa0c597 656 SMART SM00304 306 359 5.0E-10 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_10770 0696e8d74f3f7c3244bf70915fa0c597 656 Gene3D G3DSA:1.20.1480.50 269 365 6.3E-18 T 31-10-2018 DY252_10770 0696e8d74f3f7c3244bf70915fa0c597 656 Pfam PF00672 HAMP domain 306 356 1.4E-10 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_10770 0696e8d74f3f7c3244bf70915fa0c597 656 SMART SM00283 392 650 8.5E-35 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_10770 0696e8d74f3f7c3244bf70915fa0c597 656 Gene3D G3DSA:1.10.287.950 375 655 3.5E-52 T 31-10-2018 DY252_00855 8948605b53e3f2835db978e1290b06e2 179 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 16 177 3.0E-58 T 31-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 DY252_00855 8948605b53e3f2835db978e1290b06e2 179 SUPERFAMILY SSF52540 15 179 3.38E-53 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_00855 8948605b53e3f2835db978e1290b06e2 179 PIRSF PIRSF006135 13 179 1.1E-51 T 31-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 DY252_00855 8948605b53e3f2835db978e1290b06e2 179 Gene3D G3DSA:3.40.50.300 15 179 2.5E-55 T 31-10-2018 DY252_20490 7067cbb8be9b22c36c825fade0ea95cd 730 Gene3D G3DSA:3.20.20.360 10 585 6.0E-273 T 31-10-2018 DY252_20490 7067cbb8be9b22c36c825fade0ea95cd 730 Gene3D G3DSA:2.170.170.11 135 269 6.0E-273 T 31-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DY252_20490 7067cbb8be9b22c36c825fade0ea95cd 730 Hamap MF_00641 Malate synthase G [glcB]. 1 730 390.572 T 31-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DY252_20490 7067cbb8be9b22c36c825fade0ea95cd 730 SUPERFAMILY SSF51645 2 728 5.1E-303 T 31-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DY252_20490 7067cbb8be9b22c36c825fade0ea95cd 730 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 3 727 0.0 T 31-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DY252_20490 7067cbb8be9b22c36c825fade0ea95cd 730 Gene3D G3DSA:1.20.1220.12 589 730 7.3E-74 T 31-10-2018 DY252_20490 7067cbb8be9b22c36c825fade0ea95cd 730 Pfam PF01274 Malate synthase 18 702 6.8E-169 T 31-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DY252_12700 b870b987ef495caa20a4536ee26838b1 326 Pfam PF00753 Metallo-beta-lactamase superfamily 101 304 2.8E-20 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_12700 b870b987ef495caa20a4536ee26838b1 326 SMART SM00849 100 304 7.1E-18 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_12700 b870b987ef495caa20a4536ee26838b1 326 SUPERFAMILY SSF56281 48 324 5.63E-41 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_12700 b870b987ef495caa20a4536ee26838b1 326 Gene3D G3DSA:3.60.15.10 43 326 1.8E-77 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_05050 0b2e1e2d400cb0abcbebb1d27e3dc007 131 Gene3D G3DSA:1.10.260.40 2 90 2.3E-18 T 31-10-2018 DY252_05050 0b2e1e2d400cb0abcbebb1d27e3dc007 131 SMART SM00530 26 81 2.0E-14 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_05050 0b2e1e2d400cb0abcbebb1d27e3dc007 131 SUPERFAMILY SSF47413 12 89 2.47E-26 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_05050 0b2e1e2d400cb0abcbebb1d27e3dc007 131 Pfam PF01381 Helix-turn-helix 27 81 7.4E-15 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_06815 4ea127becaf9371662babf747684125a 886 PIRSF PIRSF000853 1 886 0.0 T 31-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DY252_06815 4ea127becaf9371662babf747684125a 886 SUPERFAMILY SSF51621 525 882 7.33E-128 T 31-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DY252_06815 4ea127becaf9371662babf747684125a 886 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 3 883 0.0 T 31-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DY252_06815 4ea127becaf9371662babf747684125a 886 SUPERFAMILY SSF52009 403 523 6.41E-38 T 31-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 DY252_06815 4ea127becaf9371662babf747684125a 886 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 317 368 4.0E-11 T 31-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 DY252_06815 4ea127becaf9371662babf747684125a 886 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 21 299 5.7E-52 T 31-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 DY252_06815 4ea127becaf9371662babf747684125a 886 Gene3D G3DSA:1.10.189.10 360 542 2.4E-78 T 31-10-2018 DY252_06815 4ea127becaf9371662babf747684125a 886 Pfam PF00391 PEP-utilising enzyme, mobile domain 435 516 4.6E-28 T 31-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DY252_06815 4ea127becaf9371662babf747684125a 886 Gene3D G3DSA:3.30.1490.20 14 246 3.6E-108 T 31-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DY252_06815 4ea127becaf9371662babf747684125a 886 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 463 474 - T 31-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 DY252_06815 4ea127becaf9371662babf747684125a 886 Gene3D G3DSA:3.20.20.60 545 886 2.7E-147 T 31-10-2018 DY252_06815 4ea127becaf9371662babf747684125a 886 Gene3D G3DSA:1.20.80.30 114 201 3.6E-108 T 31-10-2018 DY252_06815 4ea127becaf9371662babf747684125a 886 Gene3D G3DSA:3.30.470.20 247 356 2.1E-39 T 31-10-2018 DY252_06815 4ea127becaf9371662babf747684125a 886 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 774 792 - T 31-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 DY252_06815 4ea127becaf9371662babf747684125a 886 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 531 882 7.2E-89 T 31-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 DY252_06815 4ea127becaf9371662babf747684125a 886 Gene3D G3DSA:3.50.30.10 398 522 2.4E-78 T 31-10-2018 DY252_06815 4ea127becaf9371662babf747684125a 886 SUPERFAMILY SSF56059 1 393 3.88E-148 T 31-10-2018 DY252_11390 acc3b99567dec0a8991fb5a9ac266d99 393 TIGRFAM TIGR01365 serC_2: phosphoserine aminotransferase 13 386 1.6E-193 T 31-10-2018 IPR006271 Phosphoserine aminotransferase, Methanosarcina-type GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52 DY252_11390 acc3b99567dec0a8991fb5a9ac266d99 393 PIRSF PIRSF000525 13 387 8.0E-51 T 31-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DY252_11390 acc3b99567dec0a8991fb5a9ac266d99 393 Gene3D G3DSA:3.40.640.10 31 268 7.5E-45 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_11390 acc3b99567dec0a8991fb5a9ac266d99 393 Gene3D G3DSA:3.90.1150.10 271 385 3.2E-14 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_11390 acc3b99567dec0a8991fb5a9ac266d99 393 Pfam PF00266 Aminotransferase class-V 143 319 2.4E-6 T 31-10-2018 IPR000192 Aminotransferase class V domain DY252_11390 acc3b99567dec0a8991fb5a9ac266d99 393 SUPERFAMILY SSF53383 13 384 3.64E-76 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_17420 8b771f650ee3799cf2b13b4faa10c559 345 Pfam PF01699 Sodium/calcium exchanger protein 14 131 3.9E-8 T 31-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 DY252_17420 8b771f650ee3799cf2b13b4faa10c559 345 Pfam PF01699 Sodium/calcium exchanger protein 200 343 2.4E-14 T 31-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 DY252_17420 8b771f650ee3799cf2b13b4faa10c559 345 Gene3D G3DSA:1.20.1420.30 44 336 1.1E-34 T 31-10-2018 DY252_17420 8b771f650ee3799cf2b13b4faa10c559 345 Gene3D G3DSA:1.20.58.1130 19 228 1.1E-34 T 31-10-2018 DY252_19480 91aa7f3a532287503343868cb1c6b568 641 Pfam PF06213 Cobalamin biosynthesis protein CobT 9 272 6.5E-82 T 31-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 DY252_19480 91aa7f3a532287503343868cb1c6b568 641 SMART SM00327 403 612 7.5E-9 T 31-10-2018 IPR002035 von Willebrand factor, type A DY252_19480 91aa7f3a532287503343868cb1c6b568 641 Gene3D G3DSA:3.40.50.410 403 604 1.2E-7 T 31-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DY252_19480 91aa7f3a532287503343868cb1c6b568 641 PIRSF PIRSF031715 1 618 5.7E-251 T 31-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 DY252_19480 91aa7f3a532287503343868cb1c6b568 641 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 392 609 1.1E-110 T 31-10-2018 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 DY252_19480 91aa7f3a532287503343868cb1c6b568 641 TIGRFAM TIGR01651 CobT: cobaltochelatase, CobT subunit 10 610 4.9E-254 T 31-10-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 DY252_19480 91aa7f3a532287503343868cb1c6b568 641 SUPERFAMILY SSF53300 406 601 4.3E-15 T 31-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DY252_21575 58185e17c8d88b80b2dc4ee147923fd7 472 PIRSF PIRSF006247 1 472 7.5E-157 T 31-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 DY252_21575 58185e17c8d88b80b2dc4ee147923fd7 472 Pfam PF02386 Cation transport protein 27 465 5.2E-56 T 31-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 DY252_03840 3049499df005563adac971a57bc70d24 179 Pfam PF13302 Acetyltransferase (GNAT) domain 2 138 5.5E-24 T 31-10-2018 IPR000182 GNAT domain DY252_03840 3049499df005563adac971a57bc70d24 179 SUPERFAMILY SSF55729 2 163 4.18E-32 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_03840 3049499df005563adac971a57bc70d24 179 Gene3D G3DSA:3.40.630.30 1 168 6.7E-41 T 31-10-2018 DY252_08275 d03de1cc809461107ab17932c9dbcf95 417 SUPERFAMILY SSF53474 39 112 3.43E-5 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_08275 d03de1cc809461107ab17932c9dbcf95 417 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 4 261 4.3E-79 T 31-10-2018 IPR018712 Domain of unknown function DUF2235 DY252_16590 25fe4c769770e1dc0675a5cef2fffcf3 640 SUPERFAMILY SSF75011 235 496 1.96E-5 T 31-10-2018 DY252_09100 d1ebd99dfcb9eaa6972cd0e623a60692 485 PRINTS PR00834 HtrA/DegQ protease family signature 181 205 2.4E-54 T 31-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DY252_09100 d1ebd99dfcb9eaa6972cd0e623a60692 485 PRINTS PR00834 HtrA/DegQ protease family signature 238 255 2.4E-54 T 31-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DY252_09100 d1ebd99dfcb9eaa6972cd0e623a60692 485 PRINTS PR00834 HtrA/DegQ protease family signature 323 335 2.4E-54 T 31-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DY252_09100 d1ebd99dfcb9eaa6972cd0e623a60692 485 PRINTS PR00834 HtrA/DegQ protease family signature 216 233 2.4E-54 T 31-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DY252_09100 d1ebd99dfcb9eaa6972cd0e623a60692 485 PRINTS PR00834 HtrA/DegQ protease family signature 118 130 2.4E-54 T 31-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DY252_09100 d1ebd99dfcb9eaa6972cd0e623a60692 485 PRINTS PR00834 HtrA/DegQ protease family signature 139 159 2.4E-54 T 31-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DY252_09100 d1ebd99dfcb9eaa6972cd0e623a60692 485 Gene3D G3DSA:2.40.10.120 49 277 1.0E-78 T 31-10-2018 DY252_09100 d1ebd99dfcb9eaa6972cd0e623a60692 485 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 50 478 2.4E-144 T 31-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 DY252_09100 d1ebd99dfcb9eaa6972cd0e623a60692 485 SUPERFAMILY SSF50156 393 483 1.58E-14 T 31-10-2018 IPR036034 PDZ superfamily GO:0005515 DY252_09100 d1ebd99dfcb9eaa6972cd0e623a60692 485 SUPERFAMILY SSF50156 255 365 1.84E-19 T 31-10-2018 IPR036034 PDZ superfamily GO:0005515 DY252_09100 d1ebd99dfcb9eaa6972cd0e623a60692 485 Pfam PF13180 PDZ domain 416 483 1.7E-8 T 31-10-2018 IPR001478 PDZ domain GO:0005515 DY252_09100 d1ebd99dfcb9eaa6972cd0e623a60692 485 Pfam PF13180 PDZ domain 296 368 2.0E-11 T 31-10-2018 IPR001478 PDZ domain GO:0005515 DY252_09100 d1ebd99dfcb9eaa6972cd0e623a60692 485 Gene3D G3DSA:2.30.42.10 390 485 5.8E-18 T 31-10-2018 DY252_09100 d1ebd99dfcb9eaa6972cd0e623a60692 485 SUPERFAMILY SSF50494 49 275 1.53E-63 T 31-10-2018 IPR009003 Peptidase S1, PA clan DY252_09100 d1ebd99dfcb9eaa6972cd0e623a60692 485 SMART SM00228 283 365 5.1E-12 T 31-10-2018 IPR001478 PDZ domain GO:0005515 DY252_09100 d1ebd99dfcb9eaa6972cd0e623a60692 485 SMART SM00228 408 476 4.5E-5 T 31-10-2018 IPR001478 PDZ domain GO:0005515 DY252_09100 d1ebd99dfcb9eaa6972cd0e623a60692 485 Pfam PF13365 Trypsin-like peptidase domain 109 245 8.3E-36 T 31-10-2018 DY252_09100 d1ebd99dfcb9eaa6972cd0e623a60692 485 Gene3D G3DSA:2.30.42.10 281 380 2.1E-22 T 31-10-2018 DY252_08115 c66ccaf7e7717c053d417c732796e0c0 190 Gene3D G3DSA:3.30.1360.120 82 184 3.9E-26 T 31-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DY252_08115 c66ccaf7e7717c053d417c732796e0c0 190 SUPERFAMILY SSF103025 68 184 2.94E-11 T 31-10-2018 DY252_08115 c66ccaf7e7717c053d417c732796e0c0 190 Pfam PF04268 Sarcosine oxidase, gamma subunit family 50 182 2.6E-31 T 31-10-2018 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DY252_08620 d7c5bac7debca1cbc2c4d09782b68b68 254 Gene3D G3DSA:3.40.50.300 3 253 2.3E-71 T 31-10-2018 DY252_08620 d7c5bac7debca1cbc2c4d09782b68b68 254 SMART SM00382 29 226 7.0E-14 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_08620 d7c5bac7debca1cbc2c4d09782b68b68 254 Pfam PF00005 ABC transporter 20 178 7.7E-31 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_08620 d7c5bac7debca1cbc2c4d09782b68b68 254 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_08620 d7c5bac7debca1cbc2c4d09782b68b68 254 PIRSF PIRSF039085 1 253 8.8E-114 T 31-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DY252_08620 d7c5bac7debca1cbc2c4d09782b68b68 254 SUPERFAMILY SSF52540 4 248 4.86E-73 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12410 24aa1873b5a7122f951a3ba2c4120e96 334 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 38 333 4.5E-111 T 31-10-2018 IPR011970 Lytic murein transglycosylase DY252_12410 24aa1873b5a7122f951a3ba2c4120e96 334 Gene3D G3DSA:1.10.8.350 49 213 1.2E-90 T 31-10-2018 DY252_12410 24aa1873b5a7122f951a3ba2c4120e96 334 SUPERFAMILY SSF53955 34 333 2.95E-100 T 31-10-2018 IPR023346 Lysozyme-like domain superfamily DY252_12410 24aa1873b5a7122f951a3ba2c4120e96 334 Pfam PF13406 Transglycosylase SLT domain 38 329 1.9E-108 T 31-10-2018 IPR031304 Transglycosylase SLT domain 2 DY252_12410 24aa1873b5a7122f951a3ba2c4120e96 334 Gene3D G3DSA:1.10.530.10 80 328 1.2E-90 T 31-10-2018 DY252_14790 a7a2f8f1231b70f4f6410d78a9e7911c 371 SUPERFAMILY SSF53067 9 321 1.65E-22 T 31-10-2018 DY252_14790 a7a2f8f1231b70f4f6410d78a9e7911c 371 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 6 367 35.492 T 31-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 DY252_14790 a7a2f8f1231b70f4f6410d78a9e7911c 371 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 8 366 4.2E-89 T 31-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 DY252_14790 a7a2f8f1231b70f4f6410d78a9e7911c 371 Gene3D G3DSA:3.30.420.40 145 327 1.8E-107 T 31-10-2018 DY252_14790 a7a2f8f1231b70f4f6410d78a9e7911c 371 Gene3D G3DSA:3.30.420.40 9 358 1.8E-107 T 31-10-2018 DY252_17380 3df3349ccd0bc80994f975d8b99615ed 262 Pfam PF10670 Domain of unknown function (DUF4198) 23 236 1.9E-27 T 31-10-2018 IPR019613 Protein of unknown function DUF4198 DY252_09455 e8e508719b2db4a2f9efdb8cb476af30 301 Gene3D G3DSA:3.30.1490.20 115 181 2.0E-23 T 31-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DY252_09455 e8e508719b2db4a2f9efdb8cb476af30 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 284 6.3E-82 T 31-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 DY252_09455 e8e508719b2db4a2f9efdb8cb476af30 301 Gene3D G3DSA:3.30.470.80 182 296 3.5E-42 T 31-10-2018 DY252_09455 e8e508719b2db4a2f9efdb8cb476af30 301 Pfam PF08443 RimK-like ATP-grasp domain 98 285 5.3E-66 T 31-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 DY252_09455 e8e508719b2db4a2f9efdb8cb476af30 301 Gene3D G3DSA:3.40.50.20 1 114 3.0E-36 T 31-10-2018 DY252_09455 e8e508719b2db4a2f9efdb8cb476af30 301 SUPERFAMILY SSF56059 98 288 5.48E-46 T 31-10-2018 DY252_09455 e8e508719b2db4a2f9efdb8cb476af30 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 51.323 T 31-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK DY252_10540 a4a1fbb84c8fb677161075fa922255ef 190 Gene3D G3DSA:3.40.50.850 6 189 9.4E-43 T 31-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DY252_10540 a4a1fbb84c8fb677161075fa922255ef 190 Pfam PF00857 Isochorismatase family 10 152 8.1E-23 T 31-10-2018 IPR000868 Isochorismatase-like GO:0003824 DY252_10540 a4a1fbb84c8fb677161075fa922255ef 190 SUPERFAMILY SSF52499 5 188 7.06E-37 T 31-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DY252_10620 071d16533d407a818ef0cf019e214e18 166 Gene3D G3DSA:3.40.630.30 17 153 3.8E-18 T 31-10-2018 DY252_10620 071d16533d407a818ef0cf019e214e18 166 Pfam PF00583 Acetyltransferase (GNAT) family 37 132 7.6E-9 T 31-10-2018 IPR000182 GNAT domain DY252_10620 071d16533d407a818ef0cf019e214e18 166 SUPERFAMILY SSF55729 23 150 7.5E-17 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_14830 9427674adfe0591b880cb171943330ac 175 SUPERFAMILY SSF46767 87 168 4.05E-31 T 31-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 DY252_14830 9427674adfe0591b880cb171943330ac 175 Gene3D G3DSA:1.10.10.10 87 171 2.5E-35 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_14830 9427674adfe0591b880cb171943330ac 175 Gene3D G3DSA:3.30.160.70 7 76 5.0E-7 T 31-10-2018 DY252_14830 9427674adfe0591b880cb171943330ac 175 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 11 168 35.234 T 31-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 DY252_14830 9427674adfe0591b880cb171943330ac 175 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 89 168 1.9E-31 T 31-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DY252_14830 9427674adfe0591b880cb171943330ac 175 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 138 144 - T 31-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DY252_14830 9427674adfe0591b880cb171943330ac 175 SUPERFAMILY SSF53155 9 92 6.87E-10 T 31-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DY252_14830 9427674adfe0591b880cb171943330ac 175 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 88 167 1.7E-36 T 31-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DY252_03135 258f5a1362da04b16b64137478ead779 175 Pfam PF09349 OHCU decarboxylase 16 173 6.9E-43 T 31-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DY252_03135 258f5a1362da04b16b64137478ead779 175 Gene3D G3DSA:1.10.3330.10 16 175 1.2E-58 T 31-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DY252_03135 258f5a1362da04b16b64137478ead779 175 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 19 175 3.4E-58 T 31-10-2018 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DY252_03135 258f5a1362da04b16b64137478ead779 175 SUPERFAMILY SSF158694 17 175 3.01E-48 T 31-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DY252_11550 3e48d1b115f41e8bbe47e99b8bc5046c 285 Gene3D G3DSA:3.40.50.150 97 238 1.0E-8 T 31-10-2018 DY252_11550 3e48d1b115f41e8bbe47e99b8bc5046c 285 Pfam PF13578 Methyltransferase domain 114 214 2.7E-7 T 31-10-2018 DY252_11550 3e48d1b115f41e8bbe47e99b8bc5046c 285 SUPERFAMILY SSF53335 68 231 8.03E-15 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_09095 78772e14358c35932c11595ddd23e6d3 142 SUPERFAMILY SSF64263 1 119 2.22E-52 T 31-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_09095 78772e14358c35932c11595ddd23e6d3 142 Pfam PF01196 Ribosomal protein L17 20 116 1.5E-36 T 31-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_09095 78772e14358c35932c11595ddd23e6d3 142 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.36 T 31-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_09095 78772e14358c35932c11595ddd23e6d3 142 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 31-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_09095 78772e14358c35932c11595ddd23e6d3 142 Gene3D G3DSA:3.90.1030.10 1 116 3.8E-50 T 31-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_09095 78772e14358c35932c11595ddd23e6d3 142 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 2.4E-46 T 31-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_06935 c62fbdcae44a49bdbea3a0773fd69601 469 Pfam PF10150 Ribonuclease E/G family 109 375 7.0E-48 T 31-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 DY252_06935 c62fbdcae44a49bdbea3a0773fd69601 469 Gene3D G3DSA:2.40.50.140 42 112 1.6E-5 T 31-10-2018 DY252_06935 c62fbdcae44a49bdbea3a0773fd69601 469 SUPERFAMILY SSF50249 44 111 9.42E-6 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_11945 d0dfbcf47b862c42be1b2f570e6ba7e4 395 SUPERFAMILY SSF103473 1 392 4.05E-32 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_11945 d0dfbcf47b862c42be1b2f570e6ba7e4 395 Pfam PF07690 Major Facilitator Superfamily 13 244 5.4E-9 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_11945 d0dfbcf47b862c42be1b2f570e6ba7e4 395 Gene3D G3DSA:1.20.1250.20 2 388 3.4E-32 T 31-10-2018 DY252_02955 32be4e8bf57b48044aab45f6951bc845 219 PIRSF PIRSF006324 1 219 4.9E-61 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_02955 32be4e8bf57b48044aab45f6951bc845 219 Pfam PF01810 LysE type translocator 17 217 6.0E-32 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_17990 41aff1e3ac521d9bfed784f20b7e306a 435 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 17 431 2.1E-85 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_17990 41aff1e3ac521d9bfed784f20b7e306a 435 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 27 432 1.2E-90 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_17990 41aff1e3ac521d9bfed784f20b7e306a 435 PIRSF PIRSF006066 11 434 2.5E-76 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_00910 4b746194232e310d150113143ade19dd 341 Gene3D G3DSA:3.40.50.1400 3 129 2.1E-23 T 31-10-2018 DY252_00910 4b746194232e310d150113143ade19dd 341 Gene3D G3DSA:3.40.50.1400 133 253 7.7E-18 T 31-10-2018 DY252_00910 4b746194232e310d150113143ade19dd 341 SUPERFAMILY SSF53800 4 252 4.8E-59 T 31-10-2018 DY252_00910 4b746194232e310d150113143ade19dd 341 Pfam PF01903 CbiX 143 245 1.4E-20 T 31-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 DY252_00910 4b746194232e310d150113143ade19dd 341 Pfam PF01903 CbiX 12 115 6.6E-23 T 31-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 DY252_17405 0d2106177f0f5a0831754b4caac3391c 245 Gene3D G3DSA:3.40.190.10 54 112 2.4E-9 T 31-10-2018 DY252_17405 0d2106177f0f5a0831754b4caac3391c 245 SUPERFAMILY SSF53850 54 186 1.16E-12 T 31-10-2018 DY252_17405 0d2106177f0f5a0831754b4caac3391c 245 Gene3D G3DSA:3.40.190.10 113 185 2.4E-9 T 31-10-2018 DY252_10910 6f5c4b7c2078a29a2b376e3e8307526c 319 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 314 1.9E-110 T 31-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DY252_10910 6f5c4b7c2078a29a2b376e3e8307526c 319 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 310 1.2E-141 T 31-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DY252_10910 6f5c4b7c2078a29a2b376e3e8307526c 319 SUPERFAMILY SSF56655 1 313 1.28E-111 T 31-10-2018 DY252_10910 6f5c4b7c2078a29a2b376e3e8307526c 319 PIRSF PIRSF004532 1 319 9.0E-142 T 31-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DY252_10910 6f5c4b7c2078a29a2b376e3e8307526c 319 Gene3D G3DSA:3.40.190.90 121 285 4.8E-133 T 31-10-2018 DY252_10910 6f5c4b7c2078a29a2b376e3e8307526c 319 Gene3D G3DSA:3.30.540.10 5 310 4.8E-133 T 31-10-2018 DY252_05140 a3e6be5f359308cf3680d5e02408dbfe 342 Gene3D G3DSA:3.40.50.2300 35 298 8.4E-67 T 31-10-2018 DY252_05140 a3e6be5f359308cf3680d5e02408dbfe 342 Pfam PF13407 Periplasmic binding protein domain 34 301 2.7E-44 T 31-10-2018 IPR025997 Periplasmic binding protein DY252_05140 a3e6be5f359308cf3680d5e02408dbfe 342 Gene3D G3DSA:3.40.50.2300 134 281 8.4E-67 T 31-10-2018 DY252_05140 a3e6be5f359308cf3680d5e02408dbfe 342 SUPERFAMILY SSF53822 17 326 9.03E-62 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_04930 fd3f17b327fd8b02dac8fb51a4d6bcb2 338 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 286 333 1.2E-24 T 31-10-2018 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 DY252_04930 fd3f17b327fd8b02dac8fb51a4d6bcb2 338 Gene3D G3DSA:3.40.50.720 6 310 5.9E-136 T 31-10-2018 DY252_04930 fd3f17b327fd8b02dac8fb51a4d6bcb2 338 Gene3D G3DSA:3.90.25.30 168 323 5.9E-136 T 31-10-2018 DY252_04930 fd3f17b327fd8b02dac8fb51a4d6bcb2 338 Pfam PF02719 Polysaccharide biosynthesis protein 9 283 1.6E-106 T 31-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain DY252_04930 fd3f17b327fd8b02dac8fb51a4d6bcb2 338 SUPERFAMILY SSF51735 3 295 2.88E-57 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_01630 ab588bc26a2c1d4cf1e526cd270b5cea 274 SUPERFAMILY SSF52540 19 270 3.82E-71 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_01630 ab588bc26a2c1d4cf1e526cd270b5cea 274 Pfam PF13614 AAA domain 20 195 1.5E-63 T 31-10-2018 IPR025669 AAA domain DY252_01630 ab588bc26a2c1d4cf1e526cd270b5cea 274 Gene3D G3DSA:3.40.50.300 13 272 3.3E-81 T 31-10-2018 DY252_14875 f2f473f6bb2c9dc0ff64bebdc45e77a1 1000 Pfam PF00575 S1 RNA binding domain 37 82 4.8E-6 T 31-10-2018 IPR003029 S1 domain GO:0003676 DY252_14875 f2f473f6bb2c9dc0ff64bebdc45e77a1 1000 SUPERFAMILY SSF50249 40 314 1.88E-15 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_14875 f2f473f6bb2c9dc0ff64bebdc45e77a1 1000 Pfam PF10150 Ribonuclease E/G family 310 581 5.8E-96 T 31-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 DY252_14875 f2f473f6bb2c9dc0ff64bebdc45e77a1 1000 Gene3D G3DSA:2.40.50.140 36 135 1.0E-23 T 31-10-2018 DY252_14875 f2f473f6bb2c9dc0ff64bebdc45e77a1 1000 Gene3D G3DSA:2.40.50.140 231 308 2.1E-13 T 31-10-2018 DY252_14875 f2f473f6bb2c9dc0ff64bebdc45e77a1 1000 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 247 614 1.1E-135 T 31-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 DY252_14875 f2f473f6bb2c9dc0ff64bebdc45e77a1 1000 Hamap MF_00970 Ribonuclease E [rne]. 2 999 31.315 T 31-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 DY252_14875 f2f473f6bb2c9dc0ff64bebdc45e77a1 1000 Gene3D G3DSA:3.40.1260.20 591 700 5.3E-31 T 31-10-2018 DY252_10740 63f170706886b1afb431a371e54dd2cf 193 Gene3D G3DSA:3.40.50.880 1 193 5.8E-56 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_10740 63f170706886b1afb431a371e54dd2cf 193 Pfam PF01965 DJ-1/PfpI family 4 185 3.1E-51 T 31-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DY252_10740 63f170706886b1afb431a371e54dd2cf 193 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 5 187 6.3E-59 T 31-10-2018 IPR006286 Deglycase PfpI DY252_10740 63f170706886b1afb431a371e54dd2cf 193 SUPERFAMILY SSF52317 4 187 1.18E-51 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_20240 5a9e40c1a8d99c73f39a689a92f116ee 275 SUPERFAMILY SSF53850 33 262 4.78E-29 T 31-10-2018 DY252_20240 5a9e40c1a8d99c73f39a689a92f116ee 275 Gene3D G3DSA:3.40.190.10 34 138 9.5E-7 T 31-10-2018 DY252_20240 5a9e40c1a8d99c73f39a689a92f116ee 275 Gene3D G3DSA:3.40.190.10 139 265 1.4E-7 T 31-10-2018 DY252_20240 5a9e40c1a8d99c73f39a689a92f116ee 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 262 5.8E-19 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_20240 5a9e40c1a8d99c73f39a689a92f116ee 275 SMART SM00062 36 264 0.003 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_17980 4026ed6e9c37511632f2c39736364438 329 Gene3D G3DSA:3.40.190.170 17 329 1.6E-102 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_17980 4026ed6e9c37511632f2c39736364438 329 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 307 1.2E-47 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_12470 2416b6d8ac0d80ff411f6896b49e3480 87 SUPERFAMILY SSF47336 1 82 5.37E-13 T 31-10-2018 IPR036736 ACP-like superfamily DY252_12470 2416b6d8ac0d80ff411f6896b49e3480 87 Gene3D G3DSA:1.10.1200.10 3 86 2.9E-20 T 31-10-2018 IPR036736 ACP-like superfamily DY252_12470 2416b6d8ac0d80ff411f6896b49e3480 87 Pfam PF00550 Phosphopantetheine attachment site 7 80 9.1E-10 T 31-10-2018 IPR009081 Phosphopantetheine binding ACP domain DY252_12470 2416b6d8ac0d80ff411f6896b49e3480 87 ProSitePatterns PS00012 Phosphopantetheine attachment site. 36 51 - T 31-10-2018 IPR006162 Phosphopantetheine attachment site DY252_03905 cee2e6b09ccd1fede132ed2ec2ba98cc 226 Pfam PF00072 Response regulator receiver domain 19 130 1.1E-27 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_03905 cee2e6b09ccd1fede132ed2ec2ba98cc 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 202 5.0E-14 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_03905 cee2e6b09ccd1fede132ed2ec2ba98cc 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 174 5.0E-14 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_03905 cee2e6b09ccd1fede132ed2ec2ba98cc 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 190 5.0E-14 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_03905 cee2e6b09ccd1fede132ed2ec2ba98cc 226 SMART SM00421 157 214 2.3E-22 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_03905 cee2e6b09ccd1fede132ed2ec2ba98cc 226 ProSitePatterns PS00622 LuxR-type HTH domain signature. 174 201 - T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_03905 cee2e6b09ccd1fede132ed2ec2ba98cc 226 SUPERFAMILY SSF46894 155 220 7.48E-22 T 31-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DY252_03905 cee2e6b09ccd1fede132ed2ec2ba98cc 226 Pfam PF00196 Bacterial regulatory proteins, luxR family 159 214 1.9E-20 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_03905 cee2e6b09ccd1fede132ed2ec2ba98cc 226 SUPERFAMILY SSF52172 16 142 7.83E-34 T 31-10-2018 IPR011006 CheY-like superfamily DY252_03905 cee2e6b09ccd1fede132ed2ec2ba98cc 226 Gene3D G3DSA:3.40.50.12740 17 220 8.7E-65 T 31-10-2018 DY252_03905 cee2e6b09ccd1fede132ed2ec2ba98cc 226 SMART SM00448 17 130 1.1E-29 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_01370 4c68cc349dd9f68bbb72e6984437535d 328 SUPERFAMILY SSF51430 1 323 9.04E-77 T 31-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DY252_01370 4c68cc349dd9f68bbb72e6984437535d 328 Pfam PF00248 Aldo/keto reductase family 15 316 6.5E-64 T 31-10-2018 IPR023210 NADP-dependent oxidoreductase domain DY252_01370 4c68cc349dd9f68bbb72e6984437535d 328 Gene3D G3DSA:3.20.20.100 1 326 2.9E-80 T 31-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DY252_01370 4c68cc349dd9f68bbb72e6984437535d 328 PRINTS PR00069 Aldo-keto reductase signature 138 155 5.2E-6 T 31-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DY252_01370 4c68cc349dd9f68bbb72e6984437535d 328 PRINTS PR00069 Aldo-keto reductase signature 106 124 5.2E-6 T 31-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DY252_01370 4c68cc349dd9f68bbb72e6984437535d 328 PRINTS PR00069 Aldo-keto reductase signature 42 66 5.2E-6 T 31-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DY252_10270 fc9b91b682b24df123410b52a22067e2 380 Pfam PF12698 ABC-2 family transporter protein 26 369 3.3E-32 T 31-10-2018 DY252_20985 ee9c64b19ff81cf70b0081a01b47d35a 451 Pfam PF13701 Transposase DDE domain group 1 15 445 4.5E-133 T 31-10-2018 IPR025668 Transposase DDE domain DY252_20985 ee9c64b19ff81cf70b0081a01b47d35a 451 SUPERFAMILY SSF53098 230 424 2.05E-7 T 31-10-2018 IPR012337 Ribonuclease H-like superfamily DY252_01955 f43602b386955f086a06a07583ba6501 127 Hamap MF_00048 UPF0102 protein YraN [yraN]. 17 124 16.089 T 31-10-2018 IPR003509 Uncharacterised protein family UPF0102 DY252_01955 f43602b386955f086a06a07583ba6501 127 Pfam PF02021 Uncharacterised protein family UPF0102 24 111 9.0E-19 T 31-10-2018 IPR003509 Uncharacterised protein family UPF0102 DY252_01955 f43602b386955f086a06a07583ba6501 127 Gene3D G3DSA:3.40.1350.10 23 127 1.3E-24 T 31-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 DY252_01955 f43602b386955f086a06a07583ba6501 127 SUPERFAMILY SSF52980 19 125 6.97E-21 T 31-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DY252_12775 d8b96cf23dbffc0458d1ee9402001572 381 SUPERFAMILY SSF55874 204 358 1.44E-37 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_12775 d8b96cf23dbffc0458d1ee9402001572 381 SMART SM00091 11 79 0.0013 T 31-10-2018 IPR000014 PAS domain DY252_12775 d8b96cf23dbffc0458d1ee9402001572 381 SUPERFAMILY SSF55785 16 74 4.89E-6 T 31-10-2018 IPR035965 PAS domain superfamily DY252_12775 d8b96cf23dbffc0458d1ee9402001572 381 SMART SM00387 240 361 4.3E-31 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_12775 d8b96cf23dbffc0458d1ee9402001572 381 SMART SM00388 136 200 3.9E-13 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_12775 d8b96cf23dbffc0458d1ee9402001572 381 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 241 358 7.6E-20 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_12775 d8b96cf23dbffc0458d1ee9402001572 381 Pfam PF00989 PAS fold 16 109 1.7E-7 T 31-10-2018 IPR013767 PAS fold GO:0006355 DY252_12775 d8b96cf23dbffc0458d1ee9402001572 381 Pfam PF00512 His Kinase A (phospho-acceptor) domain 138 195 2.7E-13 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_12775 d8b96cf23dbffc0458d1ee9402001572 381 Gene3D G3DSA:3.30.565.10 200 366 9.3E-42 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_12775 d8b96cf23dbffc0458d1ee9402001572 381 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 358 3.2E-18 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_12775 d8b96cf23dbffc0458d1ee9402001572 381 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 320 3.2E-18 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_12775 d8b96cf23dbffc0458d1ee9402001572 381 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 306 3.2E-18 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_12775 d8b96cf23dbffc0458d1ee9402001572 381 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 339 3.2E-18 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_12775 d8b96cf23dbffc0458d1ee9402001572 381 Gene3D G3DSA:3.30.450.20 14 115 9.2E-11 T 31-10-2018 DY252_12775 d8b96cf23dbffc0458d1ee9402001572 381 Gene3D G3DSA:1.10.287.130 121 197 9.1E-12 T 31-10-2018 DY252_12775 d8b96cf23dbffc0458d1ee9402001572 381 SUPERFAMILY SSF47384 133 195 3.34E-10 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_15545 73c1ccc6fa11474ddf6bcc30c0231071 356 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 337 3.3E-141 T 31-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 DY252_15545 73c1ccc6fa11474ddf6bcc30c0231071 356 Gene3D G3DSA:3.40.50.720 2 322 1.4E-128 T 31-10-2018 DY252_15545 73c1ccc6fa11474ddf6bcc30c0231071 356 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 9.2E-98 T 31-10-2018 IPR016040 NAD(P)-binding domain DY252_15545 73c1ccc6fa11474ddf6bcc30c0231071 356 SUPERFAMILY SSF51735 1 335 1.84E-94 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_15545 73c1ccc6fa11474ddf6bcc30c0231071 356 Gene3D G3DSA:3.90.25.10 200 330 1.4E-128 T 31-10-2018 DY252_21520 1ca29799c2a205d28675d52c02dc8ffa 400 Gene3D G3DSA:3.40.640.10 9 263 2.2E-72 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_21520 1ca29799c2a205d28675d52c02dc8ffa 400 Gene3D G3DSA:3.90.1150.10 264 399 2.4E-50 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_21520 1ca29799c2a205d28675d52c02dc8ffa 400 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 15 398 7.8E-129 T 31-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DY252_21520 1ca29799c2a205d28675d52c02dc8ffa 400 SUPERFAMILY SSF53383 41 398 1.14E-108 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_21520 1ca29799c2a205d28675d52c02dc8ffa 400 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 15 399 52.165 T 31-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 DY252_21520 1ca29799c2a205d28675d52c02dc8ffa 400 PIRSF PIRSF001434 1 400 3.5E-122 T 31-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DY252_21520 1ca29799c2a205d28675d52c02dc8ffa 400 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 14 398 1.5E-166 T 31-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 Pfam PF03483 B3/4 domain 218 389 9.6E-65 T 31-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 SUPERFAMILY SSF56037 205 402 2.01E-71 T 31-10-2018 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 795 42.264 T 31-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 SMART SM00873 217 389 1.1E-84 T 31-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 Gene3D G3DSA:2.40.50.140 39 154 2.3E-66 T 31-10-2018 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 SMART SM00874 405 473 3.7E-23 T 31-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 Pfam PF03484 tRNA synthetase B5 domain 409 473 1.4E-15 T 31-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 Pfam PF01588 Putative tRNA binding domain 45 145 1.0E-23 T 31-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 801 1.9E-231 T 31-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 Gene3D G3DSA:3.50.40.10 204 398 4.9E-72 T 31-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 Gene3D G3DSA:3.30.56.10 406 478 1.7E-20 T 31-10-2018 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 Gene3D G3DSA:3.30.70.380 709 802 5.5E-27 T 31-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 Pfam PF03147 Ferredoxin-fold anticodon binding domain 708 801 9.3E-27 T 31-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 SUPERFAMILY SSF54991 705 801 2.75E-27 T 31-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 SMART SM00896 708 801 8.7E-40 T 31-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 SUPERFAMILY SSF55681 469 694 1.84E-45 T 31-10-2018 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 SUPERFAMILY SSF46955 407 477 4.76E-17 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 Gene3D G3DSA:3.30.56.10 5 181 2.3E-66 T 31-10-2018 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 Gene3D G3DSA:3.30.930.10 496 692 6.1E-49 T 31-10-2018 DY252_02520 118a0ea0b6e24ea62269c3a0ed8b788d 802 SUPERFAMILY SSF50249 36 189 1.49E-45 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_12960 72b5222dbaf08e89dd965ce9cdf211a8 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 41 - T 31-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DY252_12960 72b5222dbaf08e89dd965ce9cdf211a8 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 1.5E-7 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_12960 72b5222dbaf08e89dd965ce9cdf211a8 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 1.5E-7 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_12960 72b5222dbaf08e89dd965ce9cdf211a8 253 SUPERFAMILY SSF100950 75 234 1.57E-21 T 31-10-2018 IPR037171 NagB/RpiA transferase-like DY252_12960 72b5222dbaf08e89dd965ce9cdf211a8 253 Pfam PF08220 DeoR-like helix-turn-helix domain 7 61 2.1E-17 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_12960 72b5222dbaf08e89dd965ce9cdf211a8 253 Gene3D G3DSA:1.10.10.10 1 56 2.3E-5 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_12960 72b5222dbaf08e89dd965ce9cdf211a8 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 3.4E-40 T 31-10-2018 IPR014036 DeoR C-terminal sensor domain DY252_12960 72b5222dbaf08e89dd965ce9cdf211a8 253 SMART SM00420 7 59 4.4E-17 T 31-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DY252_12960 72b5222dbaf08e89dd965ce9cdf211a8 253 SUPERFAMILY SSF46785 4 63 7.91E-14 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_12960 72b5222dbaf08e89dd965ce9cdf211a8 253 SMART SM01134 72 234 2.2E-57 T 31-10-2018 DY252_07885 aaf4cd7797fab98449ade993cb21a333 306 SUPERFAMILY SSF161098 19 298 2.06E-44 T 31-10-2018 IPR035906 MetI-like superfamily DY252_07885 aaf4cd7797fab98449ade993cb21a333 306 Gene3D G3DSA:1.10.3720.10 58 301 7.8E-43 T 31-10-2018 IPR035906 MetI-like superfamily DY252_07885 aaf4cd7797fab98449ade993cb21a333 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 133 297 7.2E-12 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_17085 817391e1bbc6d6dd7274d914df387314 374 Gene3D G3DSA:2.60.40.10 57 141 5.6E-11 T 31-10-2018 IPR013783 Immunoglobulin-like fold DY252_17085 817391e1bbc6d6dd7274d914df387314 374 Gene3D G3DSA:2.60.40.10 224 302 1.0E-8 T 31-10-2018 IPR013783 Immunoglobulin-like fold DY252_17085 817391e1bbc6d6dd7274d914df387314 374 Pfam PF01476 LysM domain 320 365 1.2E-7 T 31-10-2018 IPR018392 LysM domain DY252_17085 817391e1bbc6d6dd7274d914df387314 374 Gene3D G3DSA:3.10.350.10 318 366 5.4E-11 T 31-10-2018 IPR036779 LysM domain superfamily DY252_17085 817391e1bbc6d6dd7274d914df387314 374 SUPERFAMILY SSF54106 319 368 7.46E-5 T 31-10-2018 DY252_04775 526d183092ddf416940d5a29a74df06d 146 Gene3D G3DSA:1.10.10.60 2 45 4.1E-8 T 31-10-2018 DY252_04775 526d183092ddf416940d5a29a74df06d 146 Pfam PF07750 GcrA cell cycle regulator 1 71 1.9E-15 T 31-10-2018 IPR011681 GcrA cell cycle regulator DY252_03275 000053a38413f06247ea4342c56f738d 181 SUPERFAMILY SSF69287 16 73 2.75E-12 T 31-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily DY252_03275 000053a38413f06247ea4342c56f738d 181 Hamap MF_00822 Urease accessory protein UreE [ureE]. 3 143 20.004 T 31-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 DY252_03275 000053a38413f06247ea4342c56f738d 181 SMART SM00988 1 68 7.2E-10 T 31-10-2018 IPR004029 UreE urease accessory, N-terminal DY252_03275 000053a38413f06247ea4342c56f738d 181 Pfam PF02814 UreE urease accessory protein, N-terminal domain 15 68 3.4E-12 T 31-10-2018 IPR004029 UreE urease accessory, N-terminal DY252_03275 000053a38413f06247ea4342c56f738d 181 PIRSF PIRSF036402 1 181 1.2E-31 T 31-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 DY252_03275 000053a38413f06247ea4342c56f738d 181 Gene3D G3DSA:3.30.70.790 75 146 3.6E-23 T 31-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 DY252_03275 000053a38413f06247ea4342c56f738d 181 Pfam PF05194 UreE urease accessory protein, C-terminal domain 75 174 5.4E-18 T 31-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 DY252_03275 000053a38413f06247ea4342c56f738d 181 Gene3D G3DSA:2.60.260.20 5 74 2.1E-12 T 31-10-2018 DY252_03275 000053a38413f06247ea4342c56f738d 181 SUPERFAMILY SSF69737 75 142 5.89E-17 T 31-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 DY252_08515 4b6e62c7b49b4e7b45caa4ebfaac5e4f 375 Gene3D G3DSA:3.30.420.150 164 354 4.9E-49 T 31-10-2018 DY252_08515 4b6e62c7b49b4e7b45caa4ebfaac5e4f 375 SUPERFAMILY SSF53067 42 163 8.42E-35 T 31-10-2018 DY252_08515 4b6e62c7b49b4e7b45caa4ebfaac5e4f 375 Pfam PF02541 Ppx/GppA phosphatase family 62 351 2.4E-47 T 31-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 DY252_08515 4b6e62c7b49b4e7b45caa4ebfaac5e4f 375 Gene3D G3DSA:3.30.420.40 30 163 3.2E-38 T 31-10-2018 DY252_08515 4b6e62c7b49b4e7b45caa4ebfaac5e4f 375 SUPERFAMILY SSF53067 168 353 1.94E-35 T 31-10-2018 DY252_11435 834a064bac0e917602c3675786bd6b45 167 Gene3D G3DSA:3.40.140.10 22 160 1.9E-31 T 31-10-2018 DY252_11435 834a064bac0e917602c3675786bd6b45 167 SMART SM00232 20 145 0.003 T 31-10-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 DY252_11435 834a064bac0e917602c3675786bd6b45 167 Pfam PF14464 Prokaryotic homologs of the JAB domain 26 130 6.8E-21 T 31-10-2018 IPR028090 JAB domain, prokaryotic DY252_11435 834a064bac0e917602c3675786bd6b45 167 SUPERFAMILY SSF102712 21 143 4.71E-25 T 31-10-2018 DY252_05510 44e775ec92d37549b2323ec97f62e46f 161 SMART SM00344 6 115 9.5E-46 T 31-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DY252_05510 44e775ec92d37549b2323ec97f62e46f 161 Gene3D G3DSA:1.10.10.10 1 59 3.9E-25 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_05510 44e775ec92d37549b2323ec97f62e46f 161 SUPERFAMILY SSF54909 66 155 1.47E-17 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_05510 44e775ec92d37549b2323ec97f62e46f 161 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 1.9E-18 T 31-10-2018 DY252_05510 44e775ec92d37549b2323ec97f62e46f 161 SUPERFAMILY SSF46785 5 66 2.77E-20 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_05510 44e775ec92d37549b2323ec97f62e46f 161 Gene3D G3DSA:3.30.70.920 60 143 2.4E-23 T 31-10-2018 DY252_05510 44e775ec92d37549b2323ec97f62e46f 161 Pfam PF01037 Lrp/AsnC ligand binding domain 74 145 3.3E-18 T 31-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DY252_05510 44e775ec92d37549b2323ec97f62e46f 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 8.5E-18 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_05510 44e775ec92d37549b2323ec97f62e46f 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 8.5E-18 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_05510 44e775ec92d37549b2323ec97f62e46f 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 8.5E-18 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_20820 c36d65ec437f6a26a8f2a17fa12d942e 384 Gene3D G3DSA:1.10.287.470 83 156 4.2E-89 T 31-10-2018 DY252_20820 c36d65ec437f6a26a8f2a17fa12d942e 384 SUPERFAMILY SSF111369 37 285 1.44E-64 T 31-10-2018 DY252_20820 c36d65ec437f6a26a8f2a17fa12d942e 384 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 152 280 1.5E-8 T 31-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DY252_20820 c36d65ec437f6a26a8f2a17fa12d942e 384 Gene3D G3DSA:2.40.420.20 291 357 4.2E-89 T 31-10-2018 DY252_20820 c36d65ec437f6a26a8f2a17fa12d942e 384 Pfam PF13533 Biotin-lipoyl like 50 97 2.4E-10 T 31-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DY252_20820 c36d65ec437f6a26a8f2a17fa12d942e 384 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 24 359 2.5E-76 T 31-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DY252_20820 c36d65ec437f6a26a8f2a17fa12d942e 384 Gene3D G3DSA:2.40.50.100 48 195 4.2E-89 T 31-10-2018 DY252_20820 c36d65ec437f6a26a8f2a17fa12d942e 384 Gene3D G3DSA:2.40.30.170 36 290 4.2E-89 T 31-10-2018 DY252_12485 ee6094e0c1c0512f175f72e9fca04b1a 561 SUPERFAMILY SSF56801 14 444 8.24E-55 T 31-10-2018 DY252_12485 ee6094e0c1c0512f175f72e9fca04b1a 561 SUPERFAMILY SSF54637 462 544 1.1E-12 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_12485 ee6094e0c1c0512f175f72e9fca04b1a 561 Pfam PF00501 AMP-binding enzyme 104 295 8.1E-15 T 31-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DY252_12485 ee6094e0c1c0512f175f72e9fca04b1a 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 126 137 - T 31-10-2018 IPR020845 AMP-binding, conserved site DY252_12485 ee6094e0c1c0512f175f72e9fca04b1a 561 Gene3D G3DSA:3.40.50.12780 5 334 4.2E-23 T 31-10-2018 DY252_12485 ee6094e0c1c0512f175f72e9fca04b1a 561 Gene3D G3DSA:3.10.129.10 447 560 1.3E-30 T 31-10-2018 DY252_12485 ee6094e0c1c0512f175f72e9fca04b1a 561 Gene3D G3DSA:3.30.300.30 335 446 5.4E-13 T 31-10-2018 DY252_12485 ee6094e0c1c0512f175f72e9fca04b1a 561 Pfam PF07977 FabA-like domain 466 535 1.0E-5 T 31-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DY252_17290 df99375b0b79b24174019d4030fdde4b 287 Gene3D G3DSA:1.10.3720.10 17 287 7.1E-52 T 31-10-2018 IPR035906 MetI-like superfamily DY252_17290 df99375b0b79b24174019d4030fdde4b 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 281 1.4E-11 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_17290 df99375b0b79b24174019d4030fdde4b 287 SUPERFAMILY SSF161098 11 281 1.27E-52 T 31-10-2018 IPR035906 MetI-like superfamily DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 SUPERFAMILY SSF56784 555 855 6.13E-51 T 31-10-2018 IPR036412 HAD-like superfamily DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 304 857 7.8E-182 T 31-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 SUPERFAMILY SSF81653 359 455 6.41E-25 T 31-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 PRINTS PR00941 Cadmium-transporting ATPase signature 154 163 2.6E-13 T 31-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 PRINTS PR00941 Cadmium-transporting ATPase signature 421 437 2.6E-13 T 31-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 PRINTS PR00941 Cadmium-transporting ATPase signature 165 186 2.6E-13 T 31-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 PRINTS PR00941 Cadmium-transporting ATPase signature 440 454 2.6E-13 T 31-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 PRINTS PR00941 Cadmium-transporting ATPase signature 339 359 2.6E-13 T 31-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 SUPERFAMILY SSF55008 13 81 1.28E-15 T 31-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 ProSitePatterns PS01047 Heavy-metal-associated domain. 156 185 - T 31-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 322 857 9.4E-127 T 31-10-2018 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 SUPERFAMILY SSF81665 307 843 1.44E-16 T 31-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 304 615 8.8E-99 T 31-10-2018 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 SUPERFAMILY SSF55008 152 217 5.37E-15 T 31-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 Pfam PF00403 Heavy-metal-associated domain 16 77 2.6E-14 T 31-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 Pfam PF00403 Heavy-metal-associated domain 154 214 1.9E-13 T 31-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 SUPERFAMILY SSF81660 567 691 2.26E-19 T 31-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 655 833 2.0E-42 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 327 590 1.8E-42 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 16 78 8.1E-11 T 31-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 ProSitePatterns PS01047 Heavy-metal-associated domain. 18 47 - T 31-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 558 564 - T 31-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 Gene3D G3DSA:3.30.70.100 10 80 7.5E-17 T 31-10-2018 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 Gene3D G3DSA:3.30.70.100 150 219 2.7E-16 T 31-10-2018 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 Gene3D G3DSA:3.40.1110.10 567 689 1.0E-82 T 31-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 Gene3D G3DSA:3.40.50.1000 537 807 1.0E-82 T 31-10-2018 IPR023214 HAD superfamily DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 714 4.0E-29 T 31-10-2018 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 682 693 4.0E-29 T 31-10-2018 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 755 774 4.0E-29 T 31-10-2018 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 405 419 4.0E-29 T 31-10-2018 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 778 790 4.0E-29 T 31-10-2018 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 556 570 4.0E-29 T 31-10-2018 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 Pfam PF00702 haloacid dehalogenase-like hydrolase 552 769 8.4E-41 T 31-10-2018 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 Pfam PF00122 E1-E2 ATPase 355 534 1.0E-53 T 31-10-2018 DY252_20830 c8a133b962d1eb90e9ad7678822e2f27 886 Gene3D G3DSA:2.70.150.20 348 460 3.6E-37 T 31-10-2018 DY252_04635 e17f9fc34c6c9af88692dbd7fb7937d6 111 Pfam PF11953 Domain of unknown function (DUF3470) 65 104 1.0E-18 T 31-10-2018 IPR022569 Ferredoxin, C-terminal DY252_04635 e17f9fc34c6c9af88692dbd7fb7937d6 111 PRINTS PR00354 7Fe ferredoxin signature 9 19 7.4E-19 T 31-10-2018 IPR000813 7Fe ferredoxin GO:0009055 DY252_04635 e17f9fc34c6c9af88692dbd7fb7937d6 111 PRINTS PR00354 7Fe ferredoxin signature 35 52 7.4E-19 T 31-10-2018 IPR000813 7Fe ferredoxin GO:0009055 DY252_04635 e17f9fc34c6c9af88692dbd7fb7937d6 111 PRINTS PR00354 7Fe ferredoxin signature 19 29 7.4E-19 T 31-10-2018 IPR000813 7Fe ferredoxin GO:0009055 DY252_04635 e17f9fc34c6c9af88692dbd7fb7937d6 111 Pfam PF00037 4Fe-4S binding domain 34 55 1.0E-6 T 31-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DY252_04635 e17f9fc34c6c9af88692dbd7fb7937d6 111 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 31-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DY252_04635 e17f9fc34c6c9af88692dbd7fb7937d6 111 SUPERFAMILY SSF54862 3 101 1.79E-23 T 31-10-2018 DY252_04635 e17f9fc34c6c9af88692dbd7fb7937d6 111 Gene3D G3DSA:3.30.70.20 2 107 3.5E-31 T 31-10-2018 DY252_16975 7c4fe39293a98f39d21ada25d9292ebe 1000 PRINTS PR00985 Leucyl-tRNA synthetase signature 135 152 2.6E-8 T 31-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DY252_16975 7c4fe39293a98f39d21ada25d9292ebe 1000 PRINTS PR00985 Leucyl-tRNA synthetase signature 713 723 2.6E-8 T 31-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DY252_16975 7c4fe39293a98f39d21ada25d9292ebe 1000 Gene3D G3DSA:3.10.20.590 934 1000 9.7E-23 T 31-10-2018 DY252_16975 7c4fe39293a98f39d21ada25d9292ebe 1000 Gene3D G3DSA:1.10.730.10 779 927 3.6E-183 T 31-10-2018 DY252_16975 7c4fe39293a98f39d21ada25d9292ebe 1000 Gene3D G3DSA:3.40.50.620 222 722 3.6E-183 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_16975 7c4fe39293a98f39d21ada25d9292ebe 1000 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 5 998 20.321 T 31-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DY252_16975 7c4fe39293a98f39d21ada25d9292ebe 1000 SUPERFAMILY SSF47323 813 999 2.13E-23 T 31-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_16975 7c4fe39293a98f39d21ada25d9292ebe 1000 Gene3D G3DSA:3.90.740.10 302 522 3.6E-183 T 31-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DY252_16975 7c4fe39293a98f39d21ada25d9292ebe 1000 Gene3D G3DSA:3.10.330.110 723 778 3.6E-183 T 31-10-2018 DY252_16975 7c4fe39293a98f39d21ada25d9292ebe 1000 Pfam PF09334 tRNA synthetases class I (M) 48 152 2.7E-12 T 31-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_16975 7c4fe39293a98f39d21ada25d9292ebe 1000 SUPERFAMILY SSF52374 9 816 5.84E-99 T 31-10-2018 DY252_16975 7c4fe39293a98f39d21ada25d9292ebe 1000 SUPERFAMILY SSF50677 298 527 1.0E-44 T 31-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DY252_16975 7c4fe39293a98f39d21ada25d9292ebe 1000 Gene3D G3DSA:3.40.50.620 39 156 3.2E-39 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_16975 7c4fe39293a98f39d21ada25d9292ebe 1000 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 297 450 3.0E-56 T 31-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 DY252_16975 7c4fe39293a98f39d21ada25d9292ebe 1000 Pfam PF08264 Anticodon-binding domain of tRNA 839 957 6.2E-13 T 31-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DY252_12330 87f4c21af35d974c8c24a7537664b77a 90 Pfam PF03937 Flavinator of succinate dehydrogenase 12 84 1.7E-22 T 31-10-2018 IPR005631 Flavinator of succinate dehydrogenase DY252_12330 87f4c21af35d974c8c24a7537664b77a 90 SUPERFAMILY SSF109910 7 86 8.11E-22 T 31-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily DY252_12330 87f4c21af35d974c8c24a7537664b77a 90 Gene3D G3DSA:1.10.150.250 7 90 4.0E-24 T 31-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily DY252_05275 59f0f8a6f54ce01ddee30a0800d6bc22 115 Pfam PF01588 Putative tRNA binding domain 15 112 6.1E-13 T 31-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DY252_05275 59f0f8a6f54ce01ddee30a0800d6bc22 115 Gene3D G3DSA:2.40.50.140 1 115 7.2E-33 T 31-10-2018 DY252_05275 59f0f8a6f54ce01ddee30a0800d6bc22 115 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 7 114 2.2E-43 T 31-10-2018 IPR008231 Probable chaperone CsaA DY252_05275 59f0f8a6f54ce01ddee30a0800d6bc22 115 SUPERFAMILY SSF50249 4 114 1.27E-31 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_19030 165dc140369d472691ddda946c4171c6 338 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 320 7.0E-37 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_11820 1632ba937bcda9b4bba38a4ec198a3d7 372 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 343 6.2E-33 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_15250 a3868862329bb90777f5095e21e8c195 125 SUPERFAMILY SSF54995 1 103 9.94E-34 T 31-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_15250 a3868862329bb90777f5095e21e8c195 125 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 6.0E-25 T 31-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_15250 a3868862329bb90777f5095e21e8c195 125 Pfam PF01250 Ribosomal protein S6 3 92 8.0E-28 T 31-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_15250 a3868862329bb90777f5095e21e8c195 125 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 21.018 T 31-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 DY252_15250 a3868862329bb90777f5095e21e8c195 125 Gene3D G3DSA:3.30.70.60 1 103 2.5E-31 T 31-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 DY252_10335 064a8852b669fbdec01e0718862eb2d3 1027 Pfam PF13183 4Fe-4S dicluster domain 597 687 4.9E-12 T 31-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DY252_10335 064a8852b669fbdec01e0718862eb2d3 1027 Gene3D G3DSA:3.30.70.2740 440 521 3.7E-7 T 31-10-2018 DY252_10335 064a8852b669fbdec01e0718862eb2d3 1027 Gene3D G3DSA:3.30.465.40 54 230 5.0E-38 T 31-10-2018 DY252_10335 064a8852b669fbdec01e0718862eb2d3 1027 Gene3D G3DSA:3.30.465.40 276 302 1.1E-5 T 31-10-2018 DY252_10335 064a8852b669fbdec01e0718862eb2d3 1027 SUPERFAMILY SSF56176 53 303 1.23E-42 T 31-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DY252_10335 064a8852b669fbdec01e0718862eb2d3 1027 Pfam PF02913 FAD linked oxidases, C-terminal domain 302 560 9.5E-57 T 31-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DY252_10335 064a8852b669fbdec01e0718862eb2d3 1027 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 673 684 - T 31-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DY252_10335 064a8852b669fbdec01e0718862eb2d3 1027 Gene3D G3DSA:3.40.462.40 303 329 1.1E-5 T 31-10-2018 DY252_10335 064a8852b669fbdec01e0718862eb2d3 1027 SUPERFAMILY SSF46548 542 692 5.75E-9 T 31-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DY252_10335 064a8852b669fbdec01e0718862eb2d3 1027 Pfam PF01565 FAD binding domain 74 210 1.1E-32 T 31-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DY252_10335 064a8852b669fbdec01e0718862eb2d3 1027 SUPERFAMILY SSF55103 284 562 1.37E-52 T 31-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DY252_02985 84d57a22834427c9677f81609fdda091 286 Gene3D G3DSA:3.40.190.10 90 170 1.8E-24 T 31-10-2018 DY252_02985 84d57a22834427c9677f81609fdda091 286 Gene3D G3DSA:3.30.70.260 190 276 3.3E-19 T 31-10-2018 DY252_02985 84d57a22834427c9677f81609fdda091 286 Pfam PF00800 Prephenate dehydratase 7 183 2.8E-53 T 31-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DY252_02985 84d57a22834427c9677f81609fdda091 286 Gene3D G3DSA:3.40.190.10 1 89 6.6E-27 T 31-10-2018 DY252_02985 84d57a22834427c9677f81609fdda091 286 SUPERFAMILY SSF53850 6 188 1.48E-56 T 31-10-2018 DY252_02985 84d57a22834427c9677f81609fdda091 286 SUPERFAMILY SSF55021 176 275 7.91E-24 T 31-10-2018 DY252_02985 84d57a22834427c9677f81609fdda091 286 PIRSF PIRSF001500 1 277 3.4E-61 T 31-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DY252_02985 84d57a22834427c9677f81609fdda091 286 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 157 179 - T 31-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DY252_02725 a3e62c006cd570fdbf5bee849d1cf6d6 538 Gene3D G3DSA:3.40.50.12780 15 437 5.8E-120 T 31-10-2018 DY252_02725 a3e62c006cd570fdbf5bee849d1cf6d6 538 Gene3D G3DSA:3.30.300.30 438 538 6.2E-31 T 31-10-2018 DY252_02725 a3e62c006cd570fdbf5bee849d1cf6d6 538 SUPERFAMILY SSF56801 9 537 1.57E-149 T 31-10-2018 DY252_02725 a3e62c006cd570fdbf5bee849d1cf6d6 538 Pfam PF00501 AMP-binding enzyme 34 440 3.7E-89 T 31-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DY252_02725 a3e62c006cd570fdbf5bee849d1cf6d6 538 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 31-10-2018 IPR020845 AMP-binding, conserved site DY252_02725 a3e62c006cd570fdbf5bee849d1cf6d6 538 Pfam PF13193 AMP-binding enzyme C-terminal domain 450 528 2.9E-22 T 31-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DY252_05045 cf58b156224ca93e7dded6b881f3eddf 374 Pfam PF01472 PUA domain 282 353 8.8E-20 T 31-10-2018 IPR002478 PUA domain GO:0003723 DY252_05045 cf58b156224ca93e7dded6b881f3eddf 374 SUPERFAMILY SSF88697 282 371 5.52E-22 T 31-10-2018 IPR015947 PUA-like superfamily DY252_05045 cf58b156224ca93e7dded6b881f3eddf 374 Hamap MF_00456 Glutamate 5-kinase [proB]. 10 264 35.852 T 31-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DY252_05045 cf58b156224ca93e7dded6b881f3eddf 374 PIRSF PIRSF000729 5 373 1.4E-121 T 31-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 DY252_05045 cf58b156224ca93e7dded6b881f3eddf 374 Pfam PF00696 Amino acid kinase family 10 240 3.2E-40 T 31-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DY252_05045 cf58b156224ca93e7dded6b881f3eddf 374 ProSitePatterns PS00902 Glutamate 5-kinase signature. 213 230 - T 31-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DY252_05045 cf58b156224ca93e7dded6b881f3eddf 374 SUPERFAMILY SSF53633 10 261 5.24E-65 T 31-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DY252_05045 cf58b156224ca93e7dded6b881f3eddf 374 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 370 6.3E-121 T 31-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DY252_05045 cf58b156224ca93e7dded6b881f3eddf 374 Gene3D G3DSA:3.40.1160.10 2 270 8.4E-81 T 31-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DY252_05045 cf58b156224ca93e7dded6b881f3eddf 374 SMART SM00359 282 364 3.6E-15 T 31-10-2018 IPR002478 PUA domain GO:0003723 DY252_05045 cf58b156224ca93e7dded6b881f3eddf 374 Gene3D G3DSA:2.30.130.10 271 372 1.2E-29 T 31-10-2018 IPR036974 PUA domain superfamily GO:0003723 DY252_05045 cf58b156224ca93e7dded6b881f3eddf 374 PRINTS PR00474 Glutamate 5-kinase family signature 82 110 6.9E-46 T 31-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DY252_05045 cf58b156224ca93e7dded6b881f3eddf 374 PRINTS PR00474 Glutamate 5-kinase family signature 154 181 6.9E-46 T 31-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DY252_05045 cf58b156224ca93e7dded6b881f3eddf 374 PRINTS PR00474 Glutamate 5-kinase family signature 122 143 6.9E-46 T 31-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DY252_05045 cf58b156224ca93e7dded6b881f3eddf 374 PRINTS PR00474 Glutamate 5-kinase family signature 215 235 6.9E-46 T 31-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DY252_05045 cf58b156224ca93e7dded6b881f3eddf 374 PRINTS PR00474 Glutamate 5-kinase family signature 48 62 6.9E-46 T 31-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DY252_07245 956a61ed45e77109c7895f94a37c7921 406 Gene3D G3DSA:3.30.70.260 254 403 4.2E-57 T 31-10-2018 DY252_07245 956a61ed45e77109c7895f94a37c7921 406 SUPERFAMILY SSF55021 330 404 1.14E-21 T 31-10-2018 DY252_07245 956a61ed45e77109c7895f94a37c7921 406 Pfam PF13840 ACT domain 337 398 9.6E-15 T 31-10-2018 IPR027795 CASTOR, ACT domain DY252_07245 956a61ed45e77109c7895f94a37c7921 406 Gene3D G3DSA:3.40.1160.10 1 253 9.2E-88 T 31-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DY252_07245 956a61ed45e77109c7895f94a37c7921 406 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 31-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DY252_07245 956a61ed45e77109c7895f94a37c7921 406 Pfam PF01842 ACT domain 266 325 4.0E-14 T 31-10-2018 IPR002912 ACT domain DY252_07245 956a61ed45e77109c7895f94a37c7921 406 PIRSF PIRSF000726 1 63 1.1E-20 T 31-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DY252_07245 956a61ed45e77109c7895f94a37c7921 406 PIRSF PIRSF000726 60 406 4.7E-133 T 31-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DY252_07245 956a61ed45e77109c7895f94a37c7921 406 SUPERFAMILY SSF53633 3 243 2.49E-73 T 31-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DY252_07245 956a61ed45e77109c7895f94a37c7921 406 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 401 7.0E-118 T 31-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DY252_07245 956a61ed45e77109c7895f94a37c7921 406 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 402 1.1E-130 T 31-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DY252_07245 956a61ed45e77109c7895f94a37c7921 406 Gene3D G3DSA:3.30.70.260 260 338 4.2E-57 T 31-10-2018 DY252_07245 956a61ed45e77109c7895f94a37c7921 406 Pfam PF00696 Amino acid kinase family 3 229 2.4E-47 T 31-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DY252_07245 956a61ed45e77109c7895f94a37c7921 406 SUPERFAMILY SSF55021 248 325 3.86E-21 T 31-10-2018 DY252_13155 6f018d938c41406e458971aea60b682b 441 SUPERFAMILY SSF51261 297 424 7.32E-52 T 31-10-2018 IPR011055 Duplicated hybrid motif DY252_13155 6f018d938c41406e458971aea60b682b 441 Pfam PF01551 Peptidase family M23 326 420 7.2E-30 T 31-10-2018 IPR016047 Peptidase M23 DY252_13155 6f018d938c41406e458971aea60b682b 441 Gene3D G3DSA:2.70.70.10 275 428 2.3E-46 T 31-10-2018 IPR011055 Duplicated hybrid motif DY252_22145 eceb4f05387c261e0f84d541fa81e800 392 Gene3D G3DSA:3.40.630.10 19 376 1.0E-95 T 31-10-2018 DY252_22145 eceb4f05387c261e0f84d541fa81e800 392 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 31-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DY252_22145 eceb4f05387c261e0f84d541fa81e800 392 SUPERFAMILY SSF55031 182 285 6.28E-19 T 31-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DY252_22145 eceb4f05387c261e0f84d541fa81e800 392 SUPERFAMILY SSF53187 9 385 2.35E-53 T 31-10-2018 DY252_22145 eceb4f05387c261e0f84d541fa81e800 392 Pfam PF07687 Peptidase dimerisation domain 178 286 6.7E-23 T 31-10-2018 IPR011650 Peptidase M20, dimerisation domain DY252_22145 eceb4f05387c261e0f84d541fa81e800 392 Pfam PF01546 Peptidase family M20/M25/M40 74 386 4.6E-30 T 31-10-2018 IPR002933 Peptidase M20 GO:0016787 DY252_22145 eceb4f05387c261e0f84d541fa81e800 392 Gene3D G3DSA:3.30.70.360 182 299 1.0E-95 T 31-10-2018 DY252_22145 eceb4f05387c261e0f84d541fa81e800 392 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 14 385 8.5E-105 T 31-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 DY252_19980 f2bbafedf85a11e633250365c59c5750 203 Pfam PF00694 Aconitase C-terminal domain 1 123 8.2E-41 T 31-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 DY252_19980 f2bbafedf85a11e633250365c59c5750 203 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 187 1.3E-83 T 31-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 DY252_19980 f2bbafedf85a11e633250365c59c5750 203 SUPERFAMILY SSF52016 1 194 5.3E-62 T 31-10-2018 DY252_19980 f2bbafedf85a11e633250365c59c5750 203 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 201 42.933 T 31-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 DY252_19980 f2bbafedf85a11e633250365c59c5750 203 Gene3D G3DSA:3.20.19.10 1 175 2.8E-78 T 31-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 DY252_09360 b020a51811b733a35f654b1c960366b5 128 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 1.2E-9 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_09360 b020a51811b733a35f654b1c960366b5 128 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 1.2E-9 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_09360 b020a51811b733a35f654b1c960366b5 128 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 34 45 1.2E-9 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_09360 b020a51811b733a35f654b1c960366b5 128 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 1.2E-9 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_09360 b020a51811b733a35f654b1c960366b5 128 Pfam PF12840 Helix-turn-helix domain 11 71 2.1E-16 T 31-10-2018 DY252_09360 b020a51811b733a35f654b1c960366b5 128 SMART SM00418 11 91 3.4E-18 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_09360 b020a51811b733a35f654b1c960366b5 128 SUPERFAMILY SSF46785 3 108 2.73E-27 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_09360 b020a51811b733a35f654b1c960366b5 128 Gene3D G3DSA:1.10.10.10 2 114 1.2E-29 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_06910 6377668e3ab552b524327d612c2ac1a2 158 Hamap MF_00678 UPF0262 protein . 4 157 35.299 T 31-10-2018 IPR008321 Uncharacterised conserved protein UCP032146 DY252_06910 6377668e3ab552b524327d612c2ac1a2 158 Pfam PF06793 Uncharacterised protein family (UPF0262) 7 157 3.8E-63 T 31-10-2018 IPR008321 Uncharacterised conserved protein UCP032146 DY252_06910 6377668e3ab552b524327d612c2ac1a2 158 PIRSF PIRSF032146 1 158 1.1E-58 T 31-10-2018 IPR008321 Uncharacterised conserved protein UCP032146 DY252_03940 a171ad6f48cc6eb29a09aaf219a00d32 343 Gene3D G3DSA:3.40.190.10 109 280 1.0E-50 T 31-10-2018 DY252_03940 a171ad6f48cc6eb29a09aaf219a00d32 343 SUPERFAMILY SSF53850 23 335 2.17E-68 T 31-10-2018 DY252_03940 a171ad6f48cc6eb29a09aaf219a00d32 343 Pfam PF12849 PBP superfamily domain 17 306 3.0E-40 T 31-10-2018 IPR024370 PBP domain DY252_03940 a171ad6f48cc6eb29a09aaf219a00d32 343 Gene3D G3DSA:3.40.190.10 24 306 1.0E-50 T 31-10-2018 DY252_09820 0fd923eeadcfc88b171257d8c606904d 327 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 30 279 5.4E-83 T 31-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DY252_09820 0fd923eeadcfc88b171257d8c606904d 327 Gene3D G3DSA:3.40.190.170 24 326 1.4E-95 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_09820 0fd923eeadcfc88b171257d8c606904d 327 PIRSF PIRSF006470 1 327 1.5E-123 T 31-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DY252_09820 0fd923eeadcfc88b171257d8c606904d 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 30 312 1.3E-100 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_00180 e623550a7925c9369ce1ce8260760905 325 SUPERFAMILY SSF161098 95 307 2.49E-19 T 31-10-2018 IPR035906 MetI-like superfamily DY252_00180 e623550a7925c9369ce1ce8260760905 325 Gene3D G3DSA:1.10.3720.10 89 318 1.6E-25 T 31-10-2018 IPR035906 MetI-like superfamily DY252_00180 e623550a7925c9369ce1ce8260760905 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 321 1.4E-43 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_09465 5a9e9902b3e5b2aa0c4c1caa9f733dec 387 Pfam PF01612 3'-5' exonuclease 2 172 4.5E-35 T 31-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DY252_09465 5a9e9902b3e5b2aa0c4c1caa9f733dec 387 SMART SM00474 1 173 1.0E-30 T 31-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DY252_09465 5a9e9902b3e5b2aa0c4c1caa9f733dec 387 SUPERFAMILY SSF47819 301 371 4.25E-13 T 31-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 DY252_09465 5a9e9902b3e5b2aa0c4c1caa9f733dec 387 Hamap MF_01899 Ribonuclease D [rnd]. 1 368 43.401 T 31-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 DY252_09465 5a9e9902b3e5b2aa0c4c1caa9f733dec 387 SUPERFAMILY SSF47819 197 296 1.74E-22 T 31-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 DY252_09465 5a9e9902b3e5b2aa0c4c1caa9f733dec 387 Gene3D G3DSA:1.10.150.80 198 294 3.2E-22 T 31-10-2018 DY252_09465 5a9e9902b3e5b2aa0c4c1caa9f733dec 387 Pfam PF00570 HRDC domain 215 282 1.6E-14 T 31-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DY252_09465 5a9e9902b3e5b2aa0c4c1caa9f733dec 387 SUPERFAMILY SSF53098 4 207 2.53E-63 T 31-10-2018 IPR012337 Ribonuclease H-like superfamily DY252_09465 5a9e9902b3e5b2aa0c4c1caa9f733dec 387 SMART SM00341 211 292 2.7E-10 T 31-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DY252_09465 5a9e9902b3e5b2aa0c4c1caa9f733dec 387 Gene3D G3DSA:3.30.420.10 1 193 1.8E-60 T 31-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DY252_09465 5a9e9902b3e5b2aa0c4c1caa9f733dec 387 TIGRFAM TIGR01388 rnd: ribonuclease D 4 368 9.8E-124 T 31-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 DY252_15690 688f775e31c6ff52aa4409ec8bcb8346 111 Pfam PF11747 Killing trait 11 78 3.0E-26 T 31-10-2018 IPR021070 Killing trait, RebB DY252_14495 7b783c3cdffc37fe22d7e1fb74eb8c5c 734 Pfam PF13428 Tetratricopeptide repeat 18 57 5.2E-6 T 31-10-2018 DY252_14495 7b783c3cdffc37fe22d7e1fb74eb8c5c 734 SUPERFAMILY SSF53756 499 691 1.75E-10 T 31-10-2018 DY252_14495 7b783c3cdffc37fe22d7e1fb74eb8c5c 734 Gene3D G3DSA:3.40.50.11380 355 707 4.0E-147 T 31-10-2018 DY252_14495 7b783c3cdffc37fe22d7e1fb74eb8c5c 734 SMART SM00028 248 281 9.3E-4 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_14495 7b783c3cdffc37fe22d7e1fb74eb8c5c 734 SMART SM00028 14 47 63.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_14495 7b783c3cdffc37fe22d7e1fb74eb8c5c 734 SMART SM00028 112 145 14.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_14495 7b783c3cdffc37fe22d7e1fb74eb8c5c 734 SMART SM00028 180 213 0.0038 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_14495 7b783c3cdffc37fe22d7e1fb74eb8c5c 734 SMART SM00028 146 179 1.0E-4 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_14495 7b783c3cdffc37fe22d7e1fb74eb8c5c 734 SMART SM00028 214 247 0.039 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_14495 7b783c3cdffc37fe22d7e1fb74eb8c5c 734 Pfam PF13844 Glycosyl transferase family 41 364 511 1.7E-32 T 31-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 DY252_14495 7b783c3cdffc37fe22d7e1fb74eb8c5c 734 Pfam PF13844 Glycosyl transferase family 41 524 712 5.1E-49 T 31-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 DY252_14495 7b783c3cdffc37fe22d7e1fb74eb8c5c 734 Gene3D G3DSA:3.40.50.2000 521 700 4.0E-147 T 31-10-2018 DY252_14495 7b783c3cdffc37fe22d7e1fb74eb8c5c 734 Pfam PF13432 Tetratricopeptide repeat 152 199 2.7E-7 T 31-10-2018 DY252_14495 7b783c3cdffc37fe22d7e1fb74eb8c5c 734 Pfam PF13432 Tetratricopeptide repeat 218 280 3.8E-7 T 31-10-2018 DY252_14495 7b783c3cdffc37fe22d7e1fb74eb8c5c 734 Gene3D G3DSA:1.25.40.10 253 315 1.2E-9 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_14495 7b783c3cdffc37fe22d7e1fb74eb8c5c 734 Gene3D G3DSA:1.25.40.10 209 248 1.2E-5 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_14495 7b783c3cdffc37fe22d7e1fb74eb8c5c 734 SUPERFAMILY SSF48452 90 287 1.14E-38 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_11150 3dfb26e5e2a44058cd16fbe81939268a 267 Gene3D G3DSA:1.10.3470.10 32 256 1.3E-6 T 31-10-2018 IPR037294 ABC transporter, BtuC-like DY252_11150 3dfb26e5e2a44058cd16fbe81939268a 267 Pfam PF00950 ABC 3 transport family 1 254 1.7E-71 T 31-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DY252_11150 3dfb26e5e2a44058cd16fbe81939268a 267 SUPERFAMILY SSF81345 3 253 5.36E-37 T 31-10-2018 IPR037294 ABC transporter, BtuC-like DY252_16670 2d25cc2cc0c030ff0437252d65f39ec4 269 Pfam PF00459 Inositol monophosphatase family 10 260 1.9E-50 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_16670 2d25cc2cc0c030ff0437252d65f39ec4 269 SUPERFAMILY SSF56655 8 262 7.33E-68 T 31-10-2018 DY252_16670 2d25cc2cc0c030ff0437252d65f39ec4 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 90 106 2.3E-35 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_16670 2d25cc2cc0c030ff0437252d65f39ec4 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 70 86 2.3E-35 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_16670 2d25cc2cc0c030ff0437252d65f39ec4 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 139 162 2.3E-35 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_16670 2d25cc2cc0c030ff0437252d65f39ec4 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 215 239 2.3E-35 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_16670 2d25cc2cc0c030ff0437252d65f39ec4 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 184 205 2.3E-35 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_16670 2d25cc2cc0c030ff0437252d65f39ec4 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 48 68 2.3E-35 T 31-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DY252_16670 2d25cc2cc0c030ff0437252d65f39ec4 269 Gene3D G3DSA:3.30.540.10 3 148 6.0E-41 T 31-10-2018 DY252_16670 2d25cc2cc0c030ff0437252d65f39ec4 269 Gene3D G3DSA:3.40.190.80 152 266 2.1E-20 T 31-10-2018 DY252_16670 2d25cc2cc0c030ff0437252d65f39ec4 269 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 90 103 - T 31-10-2018 IPR020583 Inositol monophosphatase, metal-binding site DY252_00210 429b7a440455cbcf504c39e1ff9f7225 466 SUPERFAMILY SSF53067 7 240 2.1E-16 T 31-10-2018 DY252_00210 429b7a440455cbcf504c39e1ff9f7225 466 Gene3D G3DSA:3.30.420.40 233 466 6.6E-60 T 31-10-2018 DY252_00210 429b7a440455cbcf504c39e1ff9f7225 466 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 8 241 1.0E-10 T 31-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DY252_00210 429b7a440455cbcf504c39e1ff9f7225 466 Gene3D G3DSA:3.30.420.40 2 94 7.3E-24 T 31-10-2018 DY252_00210 429b7a440455cbcf504c39e1ff9f7225 466 Gene3D G3DSA:3.30.420.40 176 232 7.7E-6 T 31-10-2018 DY252_00210 429b7a440455cbcf504c39e1ff9f7225 466 SUPERFAMILY SSF53067 8 425 3.24E-5 T 31-10-2018 DY252_12030 53d0b05b2d8d1046a9e9cd2f9adbe1cb 896 Gene3D G3DSA:3.40.50.261 135 295 1.4E-60 T 31-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DY252_12030 53d0b05b2d8d1046a9e9cd2f9adbe1cb 896 Pfam PF13549 ATP-grasp domain 483 704 1.9E-84 T 31-10-2018 DY252_12030 53d0b05b2d8d1046a9e9cd2f9adbe1cb 896 Pfam PF13380 CoA binding domain 13 139 5.4E-22 T 31-10-2018 IPR003781 CoA-binding GO:0048037 DY252_12030 53d0b05b2d8d1046a9e9cd2f9adbe1cb 896 SMART SM00881 9 104 1.1E-28 T 31-10-2018 IPR003781 CoA-binding GO:0048037 DY252_12030 53d0b05b2d8d1046a9e9cd2f9adbe1cb 896 Pfam PF13302 Acetyltransferase (GNAT) domain 737 874 2.4E-9 T 31-10-2018 IPR000182 GNAT domain DY252_12030 53d0b05b2d8d1046a9e9cd2f9adbe1cb 896 Gene3D G3DSA:3.30.470.20 488 702 6.1E-77 T 31-10-2018 DY252_12030 53d0b05b2d8d1046a9e9cd2f9adbe1cb 896 Gene3D G3DSA:3.30.1490.20 509 586 6.1E-77 T 31-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DY252_12030 53d0b05b2d8d1046a9e9cd2f9adbe1cb 896 SUPERFAMILY SSF56059 489 704 3.12E-40 T 31-10-2018 DY252_12030 53d0b05b2d8d1046a9e9cd2f9adbe1cb 896 SUPERFAMILY SSF51735 2 144 1.64E-33 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_12030 53d0b05b2d8d1046a9e9cd2f9adbe1cb 896 SUPERFAMILY SSF55729 734 876 1.54E-21 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_12030 53d0b05b2d8d1046a9e9cd2f9adbe1cb 896 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 157 293 1.3E-58 T 31-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain DY252_12030 53d0b05b2d8d1046a9e9cd2f9adbe1cb 896 SUPERFAMILY SSF52210 134 299 4.58E-48 T 31-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DY252_12030 53d0b05b2d8d1046a9e9cd2f9adbe1cb 896 Gene3D G3DSA:3.40.50.261 298 465 1.1E-57 T 31-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DY252_12030 53d0b05b2d8d1046a9e9cd2f9adbe1cb 896 Gene3D G3DSA:3.40.630.30 727 896 7.6E-40 T 31-10-2018 DY252_12030 53d0b05b2d8d1046a9e9cd2f9adbe1cb 896 SUPERFAMILY SSF52210 300 456 4.58E-46 T 31-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DY252_12030 53d0b05b2d8d1046a9e9cd2f9adbe1cb 896 Gene3D G3DSA:3.40.50.720 4 134 1.1E-37 T 31-10-2018 DY252_14395 e3b8f56e602bd1d270393a0bda91ef81 381 Pfam PF01497 Periplasmic binding protein 87 319 3.1E-17 T 31-10-2018 IPR002491 ABC transporter periplasmic binding domain DY252_14395 e3b8f56e602bd1d270393a0bda91ef81 381 SUPERFAMILY SSF53807 26 346 2.06E-44 T 31-10-2018 DY252_14395 e3b8f56e602bd1d270393a0bda91ef81 381 Gene3D G3DSA:3.40.50.1980 26 375 1.2E-98 T 31-10-2018 DY252_02855 d6c3431462e3196d567be1f35f306d5d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.0E-9 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_02855 d6c3431462e3196d567be1f35f306d5d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.0E-9 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_02855 d6c3431462e3196d567be1f35f306d5d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.0E-9 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_02855 d6c3431462e3196d567be1f35f306d5d 306 SUPERFAMILY SSF46785 3 87 8.11E-22 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_02855 d6c3431462e3196d567be1f35f306d5d 306 Gene3D G3DSA:1.10.10.10 6 95 1.6E-22 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_02855 d6c3431462e3196d567be1f35f306d5d 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.5E-18 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_02855 d6c3431462e3196d567be1f35f306d5d 306 Pfam PF03466 LysR substrate binding domain 94 290 2.0E-32 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_02855 d6c3431462e3196d567be1f35f306d5d 306 SUPERFAMILY SSF53850 95 292 1.03E-34 T 31-10-2018 DY252_02855 d6c3431462e3196d567be1f35f306d5d 306 Gene3D G3DSA:3.40.190.10 103 287 6.1E-52 T 31-10-2018 DY252_02855 d6c3431462e3196d567be1f35f306d5d 306 Gene3D G3DSA:3.40.190.10 164 260 6.1E-52 T 31-10-2018 DY252_15415 0fd7e6b030e2f712e44451b51ffd0333 399 SUPERFAMILY SSF90123 73 383 3.66E-26 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_15415 0fd7e6b030e2f712e44451b51ffd0333 399 Gene3D G3DSA:1.20.1560.10 72 381 5.5E-22 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_18135 2acbf9ef1491b698812bd060c1cf4488 274 Gene3D G3DSA:1.10.3720.10 76 273 4.3E-28 T 31-10-2018 IPR035906 MetI-like superfamily DY252_18135 2acbf9ef1491b698812bd060c1cf4488 274 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 26 273 6.8E-87 T 31-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 DY252_18135 2acbf9ef1491b698812bd060c1cf4488 274 SUPERFAMILY SSF161098 76 261 6.54E-33 T 31-10-2018 IPR035906 MetI-like superfamily DY252_18135 2acbf9ef1491b698812bd060c1cf4488 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 273 6.6E-15 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_09810 7ddce9f7b8e49c3d21031e907e82da65 469 PIRSF PIRSF006066 296 462 1.3E-51 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_09810 7ddce9f7b8e49c3d21031e907e82da65 469 PIRSF PIRSF006066 1 274 1.6E-89 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_09810 7ddce9f7b8e49c3d21031e907e82da65 469 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 8.1E-82 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_09810 7ddce9f7b8e49c3d21031e907e82da65 469 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 451 1.5E-114 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_16820 b774677a6ba8477976a9b7e46402a002 214 SUPERFAMILY SSF51206 18 121 9.81E-10 T 31-10-2018 IPR018490 Cyclic nucleotide-binding-like DY252_16820 b774677a6ba8477976a9b7e46402a002 214 Pfam PF13545 Crp-like helix-turn-helix domain 138 202 3.4E-8 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_16820 b774677a6ba8477976a9b7e46402a002 214 SUPERFAMILY SSF46785 135 205 2.3E-6 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_16820 b774677a6ba8477976a9b7e46402a002 214 Gene3D G3DSA:2.60.120.10 17 132 1.8E-12 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_16820 b774677a6ba8477976a9b7e46402a002 214 Gene3D G3DSA:1.10.10.10 134 210 1.4E-7 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_17280 8980382e946e46aaa958a13ccffd5747 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 1.3E-14 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_17280 8980382e946e46aaa958a13ccffd5747 207 Gene3D G3DSA:1.10.357.10 3 202 2.3E-33 T 31-10-2018 DY252_17280 8980382e946e46aaa958a13ccffd5747 207 SUPERFAMILY SSF46689 4 83 1.31E-18 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_17280 8980382e946e46aaa958a13ccffd5747 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.5E-9 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_17280 8980382e946e46aaa958a13ccffd5747 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.5E-9 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_02295 2446a11c4ab40837b3b27ce4b2842a3e 195 Pfam PF16998 17 kDa outer membrane surface antigen 132 195 2.2E-8 T 31-10-2018 IPR032635 Surface antigen domain DY252_02295 2446a11c4ab40837b3b27ce4b2842a3e 195 PIRSF PIRSF002721 50 195 4.9E-36 T 31-10-2018 IPR016364 Surface antigen, Rickettsia type DY252_02295 2446a11c4ab40837b3b27ce4b2842a3e 195 Pfam PF05433 Glycine zipper 2TM domain 71 112 1.7E-6 T 31-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 DY252_01530 64d9c66d5bb5d5be54674bfbd08e5de4 288 SUPERFAMILY SSF51735 115 279 1.91E-38 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_01530 64d9c66d5bb5d5be54674bfbd08e5de4 288 Gene3D G3DSA:3.40.50.10860 18 274 4.6E-83 T 31-10-2018 DY252_01530 64d9c66d5bb5d5be54674bfbd08e5de4 288 Gene3D G3DSA:3.40.50.720 114 253 4.6E-83 T 31-10-2018 DY252_01530 64d9c66d5bb5d5be54674bfbd08e5de4 288 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 135 206 1.7E-8 T 31-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DY252_01530 64d9c66d5bb5d5be54674bfbd08e5de4 288 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 14 286 32.816 T 31-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DY252_01530 64d9c66d5bb5d5be54674bfbd08e5de4 288 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 19 101 4.8E-27 T 31-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DY252_01530 64d9c66d5bb5d5be54674bfbd08e5de4 288 SUPERFAMILY SSF53223 8 114 1.27E-33 T 31-10-2018 DY252_01530 64d9c66d5bb5d5be54674bfbd08e5de4 288 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 16 278 7.6E-69 T 31-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DY252_17660 6634cae0f0745f019bb4e8a9c92538fe 549 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 22 547 2.6E-95 T 31-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DY252_17660 6634cae0f0745f019bb4e8a9c92538fe 549 Pfam PF08345 Flagellar M-ring protein C-terminal 247 411 5.0E-40 T 31-10-2018 IPR013556 Flagellar M-ring C-terminal DY252_17660 6634cae0f0745f019bb4e8a9c92538fe 549 PIRSF PIRSF004862 2 549 5.4E-136 T 31-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DY252_17660 6634cae0f0745f019bb4e8a9c92538fe 549 Gene3D G3DSA:3.30.300.30 115 211 2.8E-11 T 31-10-2018 DY252_17660 6634cae0f0745f019bb4e8a9c92538fe 549 PRINTS PR01009 Flagellar M-ring protein signature 114 132 6.5E-35 T 31-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DY252_17660 6634cae0f0745f019bb4e8a9c92538fe 549 PRINTS PR01009 Flagellar M-ring protein signature 260 278 6.5E-35 T 31-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DY252_17660 6634cae0f0745f019bb4e8a9c92538fe 549 PRINTS PR01009 Flagellar M-ring protein signature 335 359 6.5E-35 T 31-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DY252_17660 6634cae0f0745f019bb4e8a9c92538fe 549 PRINTS PR01009 Flagellar M-ring protein signature 146 160 6.5E-35 T 31-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DY252_17660 6634cae0f0745f019bb4e8a9c92538fe 549 PRINTS PR01009 Flagellar M-ring protein signature 188 206 6.5E-35 T 31-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DY252_17660 6634cae0f0745f019bb4e8a9c92538fe 549 Pfam PF01514 Secretory protein of YscJ/FliF family 24 212 9.7E-70 T 31-10-2018 IPR006182 Secretory protein YscJ/FliF DY252_16675 691167341e91a1c84ed60a2b99f25b24 291 Pfam PF01063 Amino-transferase class IV 41 262 1.9E-39 T 31-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DY252_16675 691167341e91a1c84ed60a2b99f25b24 291 Gene3D G3DSA:3.30.470.10 3 131 3.8E-29 T 31-10-2018 DY252_16675 691167341e91a1c84ed60a2b99f25b24 291 SUPERFAMILY SSF56752 9 286 6.93E-71 T 31-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DY252_16675 691167341e91a1c84ed60a2b99f25b24 291 Gene3D G3DSA:3.20.10.10 137 290 9.3E-41 T 31-10-2018 DY252_16675 691167341e91a1c84ed60a2b99f25b24 291 ProSitePatterns PS00770 Aminotransferases class-IV signature. 190 219 - T 31-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 DY252_02585 72e42e7969fb383052e96e12805c0b38 106 Pfam PF00085 Thioredoxin 4 104 2.8E-33 T 31-10-2018 IPR013766 Thioredoxin domain GO:0045454 DY252_02585 72e42e7969fb383052e96e12805c0b38 106 SUPERFAMILY SSF52833 4 104 1.38E-39 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_02585 72e42e7969fb383052e96e12805c0b38 106 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 31-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DY252_02585 72e42e7969fb383052e96e12805c0b38 106 PIRSF PIRSF000077 1 106 1.5E-42 T 31-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DY252_02585 72e42e7969fb383052e96e12805c0b38 106 PRINTS PR00421 Thioredoxin family signature 30 39 3.0E-10 T 31-10-2018 DY252_02585 72e42e7969fb383052e96e12805c0b38 106 PRINTS PR00421 Thioredoxin family signature 22 30 3.0E-10 T 31-10-2018 DY252_02585 72e42e7969fb383052e96e12805c0b38 106 PRINTS PR00421 Thioredoxin family signature 70 81 3.0E-10 T 31-10-2018 DY252_02585 72e42e7969fb383052e96e12805c0b38 106 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 105 1.2E-37 T 31-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DY252_02585 72e42e7969fb383052e96e12805c0b38 106 Gene3D G3DSA:3.40.30.10 1 106 4.4E-36 T 31-10-2018 DY252_16170 41f0045bf1b99813af14aa2d170748f3 330 Gene3D G3DSA:3.40.50.300 16 327 1.0E-93 T 31-10-2018 DY252_16170 41f0045bf1b99813af14aa2d170748f3 330 Pfam PF00005 ABC transporter 36 186 1.2E-34 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_16170 41f0045bf1b99813af14aa2d170748f3 330 SMART SM00382 44 236 4.4E-16 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_16170 41f0045bf1b99813af14aa2d170748f3 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 321 4.1E-21 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_16170 41f0045bf1b99813af14aa2d170748f3 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 302 7.3E-17 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_16170 41f0045bf1b99813af14aa2d170748f3 330 SUPERFAMILY SSF52540 43 310 1.22E-70 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_16170 41f0045bf1b99813af14aa2d170748f3 330 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_09685 b1a3dc80456e78f376305a0e614b03c4 309 SUPERFAMILY SSF49493 134 215 2.75E-20 T 31-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DY252_09685 b1a3dc80456e78f376305a0e614b03c4 309 SMART SM00271 2 60 8.3E-26 T 31-10-2018 IPR001623 DnaJ domain DY252_09685 b1a3dc80456e78f376305a0e614b03c4 309 Gene3D G3DSA:2.60.260.20 207 308 4.4E-27 T 31-10-2018 DY252_09685 b1a3dc80456e78f376305a0e614b03c4 309 SUPERFAMILY SSF49493 212 290 7.98E-22 T 31-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DY252_09685 b1a3dc80456e78f376305a0e614b03c4 309 Pfam PF01556 DnaJ C terminal domain 141 286 2.7E-37 T 31-10-2018 IPR002939 Chaperone DnaJ, C-terminal DY252_09685 b1a3dc80456e78f376305a0e614b03c4 309 SUPERFAMILY SSF46565 1 115 1.7E-28 T 31-10-2018 IPR036869 Chaperone J-domain superfamily DY252_09685 b1a3dc80456e78f376305a0e614b03c4 309 Gene3D G3DSA:2.60.260.20 136 204 4.8E-18 T 31-10-2018 DY252_09685 b1a3dc80456e78f376305a0e614b03c4 309 PRINTS PR00625 DnaJ domain signature 40 60 2.2E-19 T 31-10-2018 IPR001623 DnaJ domain DY252_09685 b1a3dc80456e78f376305a0e614b03c4 309 PRINTS PR00625 DnaJ domain signature 23 38 2.2E-19 T 31-10-2018 IPR001623 DnaJ domain DY252_09685 b1a3dc80456e78f376305a0e614b03c4 309 PRINTS PR00625 DnaJ domain signature 5 23 2.2E-19 T 31-10-2018 IPR001623 DnaJ domain DY252_09685 b1a3dc80456e78f376305a0e614b03c4 309 Pfam PF00226 DnaJ domain 3 65 5.0E-24 T 31-10-2018 IPR001623 DnaJ domain DY252_09685 b1a3dc80456e78f376305a0e614b03c4 309 Gene3D G3DSA:1.10.287.110 1 126 1.3E-29 T 31-10-2018 IPR036869 Chaperone J-domain superfamily DY252_18795 4386381d45952bd126aed2ff3a4c40cb 321 SUPERFAMILY SSF52283 4 138 8.32E-35 T 31-10-2018 DY252_18795 4386381d45952bd126aed2ff3a4c40cb 321 SUPERFAMILY SSF51735 104 290 1.97E-57 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_18795 4386381d45952bd126aed2ff3a4c40cb 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 320 3.4E-31 T 31-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DY252_18795 4386381d45952bd126aed2ff3a4c40cb 321 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 31-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DY252_18795 4386381d45952bd126aed2ff3a4c40cb 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 289 3.3E-55 T 31-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DY252_18795 4386381d45952bd126aed2ff3a4c40cb 321 Gene3D G3DSA:3.40.50.720 10 298 1.3E-107 T 31-10-2018 DY252_18795 4386381d45952bd126aed2ff3a4c40cb 321 Gene3D G3DSA:3.40.50.720 104 290 1.3E-107 T 31-10-2018 DY252_19370 fb5e5629456df762e54b6c53d767a695 220 SUPERFAMILY SSF52540 3 211 1.36E-51 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_19370 fb5e5629456df762e54b6c53d767a695 220 SMART SM00382 27 213 3.9E-9 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_19370 fb5e5629456df762e54b6c53d767a695 220 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_19370 fb5e5629456df762e54b6c53d767a695 220 Pfam PF00005 ABC transporter 18 162 1.2E-32 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_19370 fb5e5629456df762e54b6c53d767a695 220 Gene3D G3DSA:3.40.50.300 1 218 4.0E-52 T 31-10-2018 DY252_00905 e93bef2d7c0865af879851fb39211ca8 347 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 29 347 87.665 T 31-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 DY252_00905 e93bef2d7c0865af879851fb39211ca8 347 Pfam PF03186 CobD/Cbib protein 32 325 5.0E-100 T 31-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 DY252_00905 e93bef2d7c0865af879851fb39211ca8 347 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 30 321 3.5E-69 T 31-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 DY252_19545 b4157efcfda2ec5bc1a1408bfe5cd788 316 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 12 311 1.7E-99 T 31-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 DY252_19545 b4157efcfda2ec5bc1a1408bfe5cd788 316 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 311 53.388 T 31-10-2018 IPR023009 Tyrosine recombinase XerC/XerD DY252_19545 b4157efcfda2ec5bc1a1408bfe5cd788 316 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 11 91 3.3E-18 T 31-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DY252_19545 b4157efcfda2ec5bc1a1408bfe5cd788 316 Pfam PF00589 Phage integrase family 114 296 2.8E-43 T 31-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DY252_19545 b4157efcfda2ec5bc1a1408bfe5cd788 316 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 6 311 54.565 T 31-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 DY252_19545 b4157efcfda2ec5bc1a1408bfe5cd788 316 Gene3D G3DSA:1.10.150.130 6 101 6.4E-22 T 31-10-2018 IPR010998 Integrase/recombinase, N-terminal DY252_19545 b4157efcfda2ec5bc1a1408bfe5cd788 316 Gene3D G3DSA:1.10.443.10 113 304 1.1E-54 T 31-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DY252_19545 b4157efcfda2ec5bc1a1408bfe5cd788 316 SUPERFAMILY SSF56349 9 301 5.3E-56 T 31-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DY252_15010 019044c5b6cb9c8bce97ec6529241625 299 Gene3D G3DSA:3.40.50.300 26 296 1.8E-61 T 31-10-2018 DY252_15010 019044c5b6cb9c8bce97ec6529241625 299 Pfam PF09140 ATPase MipZ 29 288 1.1E-108 T 31-10-2018 IPR015223 ATPase MipZ DY252_15010 019044c5b6cb9c8bce97ec6529241625 299 SUPERFAMILY SSF52540 28 264 1.25E-24 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_20310 a6e9fe7c5e2106529d0fb23733fc6d7b 277 SUPERFAMILY SSF51621 4 270 9.94E-64 T 31-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DY252_20310 a6e9fe7c5e2106529d0fb23733fc6d7b 277 Pfam PF13714 Phosphoenolpyruvate phosphomutase 9 247 5.2E-67 T 31-10-2018 DY252_20310 a6e9fe7c5e2106529d0fb23733fc6d7b 277 Gene3D G3DSA:3.20.20.60 1 274 3.8E-63 T 31-10-2018 DY252_18910 32156625222bcf4ddb5ab8a5296db9c0 200 Gene3D G3DSA:3.90.550.10 10 200 8.8E-50 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_18910 32156625222bcf4ddb5ab8a5296db9c0 200 SUPERFAMILY SSF53448 13 195 3.38E-29 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_18910 32156625222bcf4ddb5ab8a5296db9c0 200 Pfam PF12804 MobA-like NTP transferase domain 16 175 1.2E-36 T 31-10-2018 IPR025877 MobA-like NTP transferase DY252_11755 2a23af10e038712709fe28c386bb06a2 343 SUPERFAMILY SSF46689 284 334 1.93E-9 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_11755 2a23af10e038712709fe28c386bb06a2 343 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 285 327 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_11755 2a23af10e038712709fe28c386bb06a2 343 Pfam PF01965 DJ-1/PfpI family 12 192 1.3E-22 T 31-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DY252_11755 2a23af10e038712709fe28c386bb06a2 343 SUPERFAMILY SSF46689 232 281 2.15E-9 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_11755 2a23af10e038712709fe28c386bb06a2 343 SUPERFAMILY SSF52317 9 217 7.86E-43 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_11755 2a23af10e038712709fe28c386bb06a2 343 Gene3D G3DSA:1.10.10.60 232 337 1.0E-27 T 31-10-2018 DY252_11755 2a23af10e038712709fe28c386bb06a2 343 SMART SM00342 248 331 2.0E-29 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_11755 2a23af10e038712709fe28c386bb06a2 343 Gene3D G3DSA:3.40.50.880 1 231 2.7E-55 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_11755 2a23af10e038712709fe28c386bb06a2 343 Pfam PF12833 Helix-turn-helix domain 254 333 3.3E-22 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_20560 f406842b2a8c43bbd655d056db67ba45 380 Pfam PF07969 Amidohydrolase family 229 358 2.2E-8 T 31-10-2018 IPR013108 Amidohydrolase 3 DY252_20560 f406842b2a8c43bbd655d056db67ba45 380 SUPERFAMILY SSF51556 53 347 1.63E-17 T 31-10-2018 IPR032466 Metal-dependent hydrolase DY252_20560 f406842b2a8c43bbd655d056db67ba45 380 PIRSF PIRSF038971 2 380 1.5E-140 T 31-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DY252_20560 f406842b2a8c43bbd655d056db67ba45 380 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 6 379 6.7E-145 T 31-10-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DY252_20560 f406842b2a8c43bbd655d056db67ba45 380 SUPERFAMILY SSF51338 3 377 9.6E-11 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_20560 f406842b2a8c43bbd655d056db67ba45 380 Gene3D G3DSA:3.20.20.140 53 169 4.5E-10 T 31-10-2018 DY252_20560 f406842b2a8c43bbd655d056db67ba45 380 Gene3D G3DSA:2.30.40.10 343 379 2.6E-6 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_20560 f406842b2a8c43bbd655d056db67ba45 380 Gene3D G3DSA:2.30.40.10 5 52 4.5E-10 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_20560 f406842b2a8c43bbd655d056db67ba45 380 Gene3D G3DSA:3.20.20.140 322 342 2.6E-6 T 31-10-2018 DY252_19095 fa5357108b92cd6fcf992d9b740ad930 457 Gene3D G3DSA:2.30.40.10 8 434 4.1E-168 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_19095 fa5357108b92cd6fcf992d9b740ad930 457 Gene3D G3DSA:3.20.20.140 53 446 4.1E-168 T 31-10-2018 DY252_19095 fa5357108b92cd6fcf992d9b740ad930 457 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 454 5.6E-169 T 31-10-2018 IPR010252 Formiminoglutamate deiminase DY252_19095 fa5357108b92cd6fcf992d9b740ad930 457 SUPERFAMILY SSF51556 51 377 2.97E-66 T 31-10-2018 IPR032466 Metal-dependent hydrolase DY252_19095 fa5357108b92cd6fcf992d9b740ad930 457 Pfam PF01979 Amidohydrolase family 48 429 5.7E-30 T 31-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DY252_19095 fa5357108b92cd6fcf992d9b740ad930 457 SUPERFAMILY SSF51338 27 453 1.11E-8 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_05835 0e99b87217b204eecad61253bbb644fd 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 84 187 8.0E-14 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_05835 0e99b87217b204eecad61253bbb644fd 229 SUPERFAMILY SSF56784 5 224 5.98E-46 T 31-10-2018 IPR036412 HAD-like superfamily DY252_05835 0e99b87217b204eecad61253bbb644fd 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 187 3.7E-24 T 31-10-2018 DY252_05835 0e99b87217b204eecad61253bbb644fd 229 Gene3D G3DSA:1.10.150.240 19 86 5.2E-54 T 31-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DY252_05835 0e99b87217b204eecad61253bbb644fd 229 Gene3D G3DSA:3.40.50.1000 6 213 5.2E-54 T 31-10-2018 IPR023214 HAD superfamily DY252_14540 e5533ebcefd2d8d05a7976fd11433271 587 Pfam PF14559 Tetratricopeptide repeat 29 78 6.7E-7 T 31-10-2018 DY252_14540 e5533ebcefd2d8d05a7976fd11433271 587 Gene3D G3DSA:1.25.40.10 2 312 5.7E-41 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_14540 e5533ebcefd2d8d05a7976fd11433271 587 Pfam PF13469 Sulfotransferase family 345 535 1.8E-38 T 31-10-2018 DY252_14540 e5533ebcefd2d8d05a7976fd11433271 587 SUPERFAMILY SSF52540 341 584 8.73E-55 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_14540 e5533ebcefd2d8d05a7976fd11433271 587 Gene3D G3DSA:3.40.50.300 334 587 1.0E-57 T 31-10-2018 DY252_14540 e5533ebcefd2d8d05a7976fd11433271 587 SMART SM00028 266 299 410.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_14540 e5533ebcefd2d8d05a7976fd11433271 587 SMART SM00028 53 86 75.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_14540 e5533ebcefd2d8d05a7976fd11433271 587 SMART SM00028 19 52 270.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_14540 e5533ebcefd2d8d05a7976fd11433271 587 SMART SM00028 193 226 0.57 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_14540 e5533ebcefd2d8d05a7976fd11433271 587 SMART SM00028 121 154 46.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_14540 e5533ebcefd2d8d05a7976fd11433271 587 SMART SM00028 155 188 0.0013 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_14540 e5533ebcefd2d8d05a7976fd11433271 587 Pfam PF13432 Tetratricopeptide repeat 127 189 1.1E-6 T 31-10-2018 DY252_14540 e5533ebcefd2d8d05a7976fd11433271 587 SUPERFAMILY SSF48452 29 239 3.32E-27 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_14540 e5533ebcefd2d8d05a7976fd11433271 587 Pfam PF13428 Tetratricopeptide repeat 196 235 2.7E-5 T 31-10-2018 DY252_20165 a4c6602fabbaaaab8600daf6af27bd2c 341 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 6 329 3.0E-119 T 31-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_20165 a4c6602fabbaaaab8600daf6af27bd2c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 177 193 6.2E-29 T 31-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_20165 a4c6602fabbaaaab8600daf6af27bd2c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 273 288 6.2E-29 T 31-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_20165 a4c6602fabbaaaab8600daf6af27bd2c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 233 250 6.2E-29 T 31-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_20165 a4c6602fabbaaaab8600daf6af27bd2c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 150 168 6.2E-29 T 31-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_20165 a4c6602fabbaaaab8600daf6af27bd2c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 113 126 6.2E-29 T 31-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_20165 a4c6602fabbaaaab8600daf6af27bd2c 341 Gene3D G3DSA:3.40.50.720 6 331 9.2E-126 T 31-10-2018 DY252_20165 a4c6602fabbaaaab8600daf6af27bd2c 341 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 161 317 7.8E-59 T 31-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_20165 a4c6602fabbaaaab8600daf6af27bd2c 341 Gene3D G3DSA:3.30.360.10 155 319 9.2E-126 T 31-10-2018 DY252_20165 a4c6602fabbaaaab8600daf6af27bd2c 341 PIRSF PIRSF000149 3 338 9.7E-120 T 31-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_20165 a4c6602fabbaaaab8600daf6af27bd2c 341 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 5 106 8.7E-29 T 31-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_20165 a4c6602fabbaaaab8600daf6af27bd2c 341 SUPERFAMILY SSF55347 156 318 2.38E-63 T 31-10-2018 DY252_20165 a4c6602fabbaaaab8600daf6af27bd2c 341 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 154 161 - T 31-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_20165 a4c6602fabbaaaab8600daf6af27bd2c 341 SUPERFAMILY SSF51735 4 183 7.64E-52 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_20165 a4c6602fabbaaaab8600daf6af27bd2c 341 SMART SM00846 5 156 3.1E-64 T 31-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_03035 5c83c31ac2e4482c557369807ee2e355 377 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 2.8E-53 T 31-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DY252_03035 5c83c31ac2e4482c557369807ee2e355 377 Gene3D G3DSA:2.40.110.10 119 231 8.7E-46 T 31-10-2018 DY252_03035 5c83c31ac2e4482c557369807ee2e355 377 Gene3D G3DSA:1.10.540.10 1 118 2.7E-46 T 31-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DY252_03035 5c83c31ac2e4482c557369807ee2e355 377 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 214 2.4E-26 T 31-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DY252_03035 5c83c31ac2e4482c557369807ee2e355 377 Gene3D G3DSA:1.20.140.10 232 377 4.1E-58 T 31-10-2018 DY252_03035 5c83c31ac2e4482c557369807ee2e355 377 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 122 134 - T 31-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DY252_03035 5c83c31ac2e4482c557369807ee2e355 377 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 31-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DY252_03035 5c83c31ac2e4482c557369807ee2e355 377 SUPERFAMILY SSF47203 225 375 2.09E-60 T 31-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DY252_03035 5c83c31ac2e4482c557369807ee2e355 377 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 116 6.3E-39 T 31-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DY252_03035 5c83c31ac2e4482c557369807ee2e355 377 SUPERFAMILY SSF56645 3 240 7.2E-89 T 31-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DY252_03035 5c83c31ac2e4482c557369807ee2e355 377 PIRSF PIRSF016578 217 377 8.2E-15 T 31-10-2018 DY252_03035 5c83c31ac2e4482c557369807ee2e355 377 PIRSF PIRSF016578 2 191 5.1E-10 T 31-10-2018 DY252_05375 8272393992eca6a6335beb31fdb27a99 175 PIRSF PIRSF000239 1 175 1.6E-50 T 31-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DY252_05375 8272393992eca6a6335beb31fdb27a99 175 Gene3D G3DSA:3.40.30.10 1 175 1.3E-57 T 31-10-2018 DY252_05375 8272393992eca6a6335beb31fdb27a99 175 Pfam PF00578 AhpC/TSA family 4 136 2.6E-31 T 31-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DY252_05375 8272393992eca6a6335beb31fdb27a99 175 SUPERFAMILY SSF52833 1 174 1.1E-54 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_00440 1499b5ed93170387fe8c9325424ff3b9 135 SMART SM00422 1 70 4.5E-26 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00440 1499b5ed93170387fe8c9325424ff3b9 135 SUPERFAMILY SSF46955 1 118 2.45E-33 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_00440 1499b5ed93170387fe8c9325424ff3b9 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.5E-8 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00440 1499b5ed93170387fe8c9325424ff3b9 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.5E-8 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00440 1499b5ed93170387fe8c9325424ff3b9 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.5E-8 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00440 1499b5ed93170387fe8c9325424ff3b9 135 Pfam PF13411 MerR HTH family regulatory protein 1 68 1.3E-18 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00440 1499b5ed93170387fe8c9325424ff3b9 135 Gene3D G3DSA:1.10.1660.10 1 125 2.6E-32 T 31-10-2018 DY252_00440 1499b5ed93170387fe8c9325424ff3b9 135 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 126 3.0E-53 T 31-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 DY252_13540 f0ba8924fee74d8ab6f616ad85b4a108 209 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 9 199 42.393 T 31-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DY252_13540 f0ba8924fee74d8ab6f616ad85b4a108 209 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 96 107 - T 31-10-2018 IPR018215 ClpP, Ser active site DY252_13540 f0ba8924fee74d8ab6f616ad85b4a108 209 Pfam PF00574 Clp protease 18 198 2.4E-85 T 31-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DY252_13540 f0ba8924fee74d8ab6f616ad85b4a108 209 Gene3D G3DSA:3.90.226.10 1 201 1.0E-87 T 31-10-2018 DY252_13540 f0ba8924fee74d8ab6f616ad85b4a108 209 PRINTS PR00127 Clp protease catalytic subunit P signature 96 113 1.3E-49 T 31-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DY252_13540 f0ba8924fee74d8ab6f616ad85b4a108 209 PRINTS PR00127 Clp protease catalytic subunit P signature 25 40 1.3E-49 T 31-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DY252_13540 f0ba8924fee74d8ab6f616ad85b4a108 209 PRINTS PR00127 Clp protease catalytic subunit P signature 117 136 1.3E-49 T 31-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DY252_13540 f0ba8924fee74d8ab6f616ad85b4a108 209 PRINTS PR00127 Clp protease catalytic subunit P signature 65 85 1.3E-49 T 31-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DY252_13540 f0ba8924fee74d8ab6f616ad85b4a108 209 PRINTS PR00127 Clp protease catalytic subunit P signature 174 193 1.3E-49 T 31-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DY252_13540 f0ba8924fee74d8ab6f616ad85b4a108 209 SUPERFAMILY SSF52096 16 199 1.52E-74 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_13540 f0ba8924fee74d8ab6f616ad85b4a108 209 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 8 197 5.9E-94 T 31-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DY252_13540 f0ba8924fee74d8ab6f616ad85b4a108 209 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 118 131 - T 31-10-2018 IPR033135 ClpP, histidine active site DY252_04825 bbaf122ad6d3b7a85238c17276282c24 145 Pfam PF01575 MaoC like domain 23 117 3.7E-24 T 31-10-2018 IPR002539 MaoC-like dehydratase domain DY252_04825 bbaf122ad6d3b7a85238c17276282c24 145 Gene3D G3DSA:3.10.129.10 2 142 5.7E-45 T 31-10-2018 DY252_04825 bbaf122ad6d3b7a85238c17276282c24 145 SUPERFAMILY SSF54637 8 144 1.95E-43 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_04415 d6f6e04655cf00194c72fb7af21ddd8d 304 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 173 292 3.1E-36 T 31-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DY252_04415 d6f6e04655cf00194c72fb7af21ddd8d 304 SUPERFAMILY SSF51735 11 172 1.1E-38 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_04415 d6f6e04655cf00194c72fb7af21ddd8d 304 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 11 170 1.1E-39 T 31-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DY252_04415 d6f6e04655cf00194c72fb7af21ddd8d 304 PIRSF PIRSF000103 5 303 1.3E-67 T 31-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DY252_04415 d6f6e04655cf00194c72fb7af21ddd8d 304 SUPERFAMILY SSF48179 172 296 1.01E-32 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_04415 d6f6e04655cf00194c72fb7af21ddd8d 304 Gene3D G3DSA:3.40.50.720 7 170 9.1E-49 T 31-10-2018 DY252_04415 d6f6e04655cf00194c72fb7af21ddd8d 304 Gene3D G3DSA:1.10.1040.10 171 299 4.3E-33 T 31-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DY252_21715 4666eac5fbab04f69a8895113259d7d0 292 SUPERFAMILY SSF46785 1 86 9.8E-22 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_21715 4666eac5fbab04f69a8895113259d7d0 292 SUPERFAMILY SSF53850 85 281 1.36E-20 T 31-10-2018 DY252_21715 4666eac5fbab04f69a8895113259d7d0 292 Gene3D G3DSA:1.10.10.10 1 90 3.7E-24 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_21715 4666eac5fbab04f69a8895113259d7d0 292 Gene3D G3DSA:3.40.190.10 93 257 4.3E-41 T 31-10-2018 DY252_21715 4666eac5fbab04f69a8895113259d7d0 292 Gene3D G3DSA:3.40.190.10 159 252 4.3E-41 T 31-10-2018 DY252_21715 4666eac5fbab04f69a8895113259d7d0 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.7E-20 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_21715 4666eac5fbab04f69a8895113259d7d0 292 Pfam PF03466 LysR substrate binding domain 84 250 7.6E-20 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_19470 20e18e0d2ddc712a9448785363a4ce30 696 SUPERFAMILY SSF141868 445 679 4.58E-76 T 31-10-2018 IPR035919 EAL domain superfamily DY252_19470 20e18e0d2ddc712a9448785363a4ce30 696 SMART SM00267 257 429 8.6E-37 T 31-10-2018 IPR000160 GGDEF domain DY252_19470 20e18e0d2ddc712a9448785363a4ce30 696 Gene3D G3DSA:3.30.70.270 262 441 4.1E-43 T 31-10-2018 DY252_19470 20e18e0d2ddc712a9448785363a4ce30 696 Pfam PF00563 EAL domain 445 678 1.4E-69 T 31-10-2018 IPR001633 EAL domain DY252_19470 20e18e0d2ddc712a9448785363a4ce30 696 Pfam PF00990 Diguanylate cyclase, GGDEF domain 269 424 5.5E-32 T 31-10-2018 IPR000160 GGDEF domain DY252_19470 20e18e0d2ddc712a9448785363a4ce30 696 Gene3D G3DSA:3.20.20.450 442 686 2.2E-83 T 31-10-2018 IPR035919 EAL domain superfamily DY252_19470 20e18e0d2ddc712a9448785363a4ce30 696 SMART SM00052 439 683 8.6E-92 T 31-10-2018 IPR001633 EAL domain DY252_19470 20e18e0d2ddc712a9448785363a4ce30 696 SUPERFAMILY SSF55073 273 430 9.42E-33 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_19470 20e18e0d2ddc712a9448785363a4ce30 696 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 267 427 1.4E-29 T 31-10-2018 IPR000160 GGDEF domain DY252_00955 2f6ced3c88cce00275750863e30713ec 249 Gene3D G3DSA:3.60.20.10 2 235 8.9E-25 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_00955 2f6ced3c88cce00275750863e30713ec 249 PIRSF PIRSF009120 1 249 3.7E-97 T 31-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 DY252_00955 2f6ced3c88cce00275750863e30713ec 249 SUPERFAMILY SSF56235 2 243 1.57E-31 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_12090 6787407e590fcea2c4ae6061ac46d07f 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 163 176 1.7E-12 T 31-10-2018 DY252_12090 6787407e590fcea2c4ae6061ac46d07f 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.7E-12 T 31-10-2018 DY252_12090 6787407e590fcea2c4ae6061ac46d07f 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.7E-12 T 31-10-2018 DY252_12090 6787407e590fcea2c4ae6061ac46d07f 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 2.3E-65 T 31-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DY252_12090 6787407e590fcea2c4ae6061ac46d07f 195 SUPERFAMILY SSF52317 1 188 7.15E-54 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_12090 6787407e590fcea2c4ae6061ac46d07f 195 Gene3D G3DSA:3.40.50.880 1 186 2.2E-62 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_12090 6787407e590fcea2c4ae6061ac46d07f 195 Pfam PF00117 Glutamine amidotransferase class-I 3 186 2.4E-48 T 31-10-2018 IPR017926 Glutamine amidotransferase DY252_12090 6787407e590fcea2c4ae6061ac46d07f 195 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.1E-32 T 31-10-2018 DY252_12090 6787407e590fcea2c4ae6061ac46d07f 195 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.1E-32 T 31-10-2018 DY252_12090 6787407e590fcea2c4ae6061ac46d07f 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.1E-32 T 31-10-2018 DY252_12090 6787407e590fcea2c4ae6061ac46d07f 195 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.1E-32 T 31-10-2018 DY252_12090 6787407e590fcea2c4ae6061ac46d07f 195 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.1E-32 T 31-10-2018 DY252_12090 6787407e590fcea2c4ae6061ac46d07f 195 PRINTS PR00097 Anthranilate synthase component II signature 163 176 3.1E-32 T 31-10-2018 DY252_03120 46c1d14e8e5039c7f55a5381cbe2b0b6 249 Pfam PF14559 Tetratricopeptide repeat 139 191 1.0E-5 T 31-10-2018 DY252_03120 46c1d14e8e5039c7f55a5381cbe2b0b6 249 Gene3D G3DSA:1.25.40.10 50 238 3.5E-15 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_03120 46c1d14e8e5039c7f55a5381cbe2b0b6 249 SUPERFAMILY SSF48452 62 222 6.21E-12 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_03670 21a94d693ab170b92291a8192e4f6ccb 351 Gene3D G3DSA:1.10.287.130 284 350 7.3E-19 T 31-10-2018 DY252_03670 21a94d693ab170b92291a8192e4f6ccb 351 Gene3D G3DSA:3.40.50.300 73 282 1.1E-81 T 31-10-2018 DY252_03670 21a94d693ab170b92291a8192e4f6ccb 351 SMART SM00382 75 212 9.5E-4 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_03670 21a94d693ab170b92291a8192e4f6ccb 351 SUPERFAMILY SSF52540 25 345 3.12E-87 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_03670 21a94d693ab170b92291a8192e4f6ccb 351 Pfam PF03308 ArgK protein 44 314 1.3E-110 T 31-10-2018 DY252_03670 21a94d693ab170b92291a8192e4f6ccb 351 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 39 342 1.4E-108 T 31-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 DY252_03670 21a94d693ab170b92291a8192e4f6ccb 351 Gene3D G3DSA:1.20.5.170 28 72 1.8E-18 T 31-10-2018 DY252_21635 f8528b030270ffb661e6c3ea991e68a4 214 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 214 38.132 T 31-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 DY252_21635 f8528b030270ffb661e6c3ea991e68a4 214 Gene3D G3DSA:3.20.20.70 2 214 1.6E-64 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_21635 f8528b030270ffb661e6c3ea991e68a4 214 SUPERFAMILY SSF51366 4 212 1.33E-57 T 31-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DY252_21635 f8528b030270ffb661e6c3ea991e68a4 214 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 210 4.9E-48 T 31-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 DY252_16010 d43af602c5c2d4282feb33c29c064ae3 407 Gene3D G3DSA:1.20.1250.20 6 392 2.4E-47 T 31-10-2018 DY252_16010 d43af602c5c2d4282feb33c29c064ae3 407 SUPERFAMILY SSF103473 10 392 1.31E-48 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_16010 d43af602c5c2d4282feb33c29c064ae3 407 Pfam PF07690 Major Facilitator Superfamily 15 347 2.3E-33 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_14680 4a1effd4e0aec8812c6ca245c5e849bd 152 SUPERFAMILY SSF55729 6 136 1.06E-28 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_14680 4a1effd4e0aec8812c6ca245c5e849bd 152 Pfam PF00583 Acetyltransferase (GNAT) family 34 135 2.6E-14 T 31-10-2018 IPR000182 GNAT domain DY252_14680 4a1effd4e0aec8812c6ca245c5e849bd 152 Gene3D G3DSA:3.40.630.30 2 149 2.5E-35 T 31-10-2018 DY252_19205 1e725efddfa059e7038e2e5b2503784e 526 SUPERFAMILY SSF52540 127 360 7.31E-9 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_19205 1e725efddfa059e7038e2e5b2503784e 526 Pfam PF13401 AAA domain 127 269 1.3E-21 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_19205 1e725efddfa059e7038e2e5b2503784e 526 Gene3D G3DSA:3.40.50.300 110 285 7.4E-9 T 31-10-2018 DY252_12675 0e94cc78aed783ed8e5aafac91ab47f3 205 Pfam PF13098 Thioredoxin-like domain 60 143 1.0E-14 T 31-10-2018 IPR012336 Thioredoxin-like fold DY252_12675 0e94cc78aed783ed8e5aafac91ab47f3 205 SUPERFAMILY SSF52833 49 141 1.98E-13 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_12675 0e94cc78aed783ed8e5aafac91ab47f3 205 Gene3D G3DSA:3.40.30.10 45 203 1.2E-28 T 31-10-2018 DY252_03150 e8a003ec551ea79ce1fe9ba4070ee658 498 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 49 57 - T 31-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DY252_03150 e8a003ec551ea79ce1fe9ba4070ee658 498 SUPERFAMILY SSF47741 104 177 8.9E-31 T 31-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily DY252_03150 e8a003ec551ea79ce1fe9ba4070ee658 498 SUPERFAMILY SSF56176 194 371 5.23E-52 T 31-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DY252_03150 e8a003ec551ea79ce1fe9ba4070ee658 498 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 19 65 8.7E-5 T 31-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DY252_03150 e8a003ec551ea79ce1fe9ba4070ee658 498 SUPERFAMILY SSF54292 11 96 2.42E-16 T 31-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DY252_03150 e8a003ec551ea79ce1fe9ba4070ee658 498 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 207 372 1.1E-49 T 31-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 DY252_03150 e8a003ec551ea79ce1fe9ba4070ee658 498 Gene3D G3DSA:3.10.20.30 8 95 5.2E-25 T 31-10-2018 IPR012675 Beta-grasp domain superfamily DY252_03150 e8a003ec551ea79ce1fe9ba4070ee658 498 SMART SM01092 379 481 4.4E-34 T 31-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal DY252_03150 e8a003ec551ea79ce1fe9ba4070ee658 498 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 12 481 7.7E-199 T 31-10-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 DY252_03150 e8a003ec551ea79ce1fe9ba4070ee658 498 Gene3D G3DSA:3.30.390.50 375 484 2.2E-29 T 31-10-2018 DY252_03150 e8a003ec551ea79ce1fe9ba4070ee658 498 Gene3D G3DSA:1.10.150.120 96 201 5.7E-31 T 31-10-2018 DY252_03150 e8a003ec551ea79ce1fe9ba4070ee658 498 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 379 480 5.0E-32 T 31-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal DY252_03150 e8a003ec551ea79ce1fe9ba4070ee658 498 Gene3D G3DSA:3.30.465.10 259 371 8.6E-35 T 31-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DY252_03150 e8a003ec551ea79ce1fe9ba4070ee658 498 Pfam PF01799 [2Fe-2S] binding domain 92 165 1.6E-28 T 31-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 DY252_03150 e8a003ec551ea79ce1fe9ba4070ee658 498 SUPERFAMILY SSF55447 377 482 1.57E-31 T 31-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily DY252_03150 e8a003ec551ea79ce1fe9ba4070ee658 498 PIRSF PIRSF036557 9 493 5.7E-201 T 31-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria DY252_03150 e8a003ec551ea79ce1fe9ba4070ee658 498 Gene3D G3DSA:3.30.43.10 209 258 1.7E-21 T 31-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DY252_01965 940fae802dfc626bd0ae2fa1a00d7247 435 SUPERFAMILY SSF53822 64 422 2.25E-61 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_01965 940fae802dfc626bd0ae2fa1a00d7247 435 Pfam PF13458 Periplasmic binding protein 64 420 2.7E-26 T 31-10-2018 IPR028081 Leucine-binding protein domain DY252_01965 940fae802dfc626bd0ae2fa1a00d7247 435 Gene3D G3DSA:3.40.50.2300 279 337 6.7E-8 T 31-10-2018 DY252_01965 940fae802dfc626bd0ae2fa1a00d7247 435 Gene3D G3DSA:3.40.50.2300 338 407 6.7E-8 T 31-10-2018 DY252_01965 940fae802dfc626bd0ae2fa1a00d7247 435 Gene3D G3DSA:3.40.50.2300 62 247 2.4E-21 T 31-10-2018 DY252_05220 f4f6b39d2e58964bf26fe22f92ac07cd 549 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 58 501 1.9E-161 T 31-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DY252_05220 f4f6b39d2e58964bf26fe22f92ac07cd 549 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 20 501 4.4E-194 T 31-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DY252_05220 f4f6b39d2e58964bf26fe22f92ac07cd 549 ProSitePatterns PS01303 BCCT family of transporters signature. 320 329 - T 31-10-2018 IPR018093 BCCT transporter, conserved site DY252_11775 45ab8ae696dbd58654fdd7375d3d568a 324 SUPERFAMILY SSF51197 47 303 1.92E-57 T 31-10-2018 DY252_11775 45ab8ae696dbd58654fdd7375d3d568a 324 SMART SM00558 121 292 2.4E-6 T 31-10-2018 IPR003347 JmjC domain DY252_11775 45ab8ae696dbd58654fdd7375d3d568a 324 Pfam PF13621 Cupin-like domain 57 265 1.2E-31 T 31-10-2018 DY252_11775 45ab8ae696dbd58654fdd7375d3d568a 324 Gene3D G3DSA:2.60.120.650 43 278 9.9E-55 T 31-10-2018 DY252_09840 379012e73ef3104e0c023abfdb33c56b 316 SUPERFAMILY SSF103481 60 156 1.18E-7 T 31-10-2018 DY252_09840 379012e73ef3104e0c023abfdb33c56b 316 SUPERFAMILY SSF103481 231 314 1.23E-11 T 31-10-2018 DY252_09840 379012e73ef3104e0c023abfdb33c56b 316 Pfam PF00892 EamA-like transporter family 175 311 5.3E-8 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_09840 379012e73ef3104e0c023abfdb33c56b 316 Pfam PF00892 EamA-like transporter family 25 156 2.0E-7 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_01140 dc10dc567ca30a6800b3727be41a1ac5 140 Pfam PF01475 Ferric uptake regulator family 14 132 1.7E-40 T 31-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DY252_01140 dc10dc567ca30a6800b3727be41a1ac5 140 Gene3D G3DSA:1.10.10.10 3 85 1.5E-31 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_01140 dc10dc567ca30a6800b3727be41a1ac5 140 Gene3D G3DSA:3.30.1490.190 87 137 9.4E-20 T 31-10-2018 DY252_01140 dc10dc567ca30a6800b3727be41a1ac5 140 SUPERFAMILY SSF46785 7 134 7.26E-37 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_00745 836ba2211804687c84be13d0557f1ff7 250 SUPERFAMILY SSF56281 8 249 6.09E-36 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_00745 836ba2211804687c84be13d0557f1ff7 250 Gene3D G3DSA:3.60.15.10 1 249 2.3E-40 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_00745 836ba2211804687c84be13d0557f1ff7 250 SMART SM00849 21 219 1.7E-5 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_00745 836ba2211804687c84be13d0557f1ff7 250 Pfam PF12706 Beta-lactamase superfamily domain 34 220 2.2E-17 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_12905 2485b29eb6a003a045ea8b54d39a0ba3 371 Gene3D G3DSA:3.40.50.2300 144 272 1.9E-109 T 31-10-2018 DY252_12905 2485b29eb6a003a045ea8b54d39a0ba3 371 Pfam PF13458 Periplasmic binding protein 26 362 1.0E-57 T 31-10-2018 IPR028081 Leucine-binding protein domain DY252_12905 2485b29eb6a003a045ea8b54d39a0ba3 371 Gene3D G3DSA:3.40.50.2300 33 344 1.9E-109 T 31-10-2018 DY252_12905 2485b29eb6a003a045ea8b54d39a0ba3 371 SUPERFAMILY SSF53822 25 364 1.65E-92 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_12905 2485b29eb6a003a045ea8b54d39a0ba3 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 328 343 1.6E-27 T 31-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DY252_12905 2485b29eb6a003a045ea8b54d39a0ba3 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 1.6E-27 T 31-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DY252_12905 2485b29eb6a003a045ea8b54d39a0ba3 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 1.6E-27 T 31-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DY252_12905 2485b29eb6a003a045ea8b54d39a0ba3 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 1.6E-27 T 31-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DY252_12905 2485b29eb6a003a045ea8b54d39a0ba3 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 1.6E-27 T 31-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DY252_18835 f9ed09b9dc14525bbc13108a26458439 365 SUPERFAMILY SSF51419 10 235 5.56E-43 T 31-10-2018 IPR029066 PLP-binding barrel DY252_18835 f9ed09b9dc14525bbc13108a26458439 365 SUPERFAMILY SSF50621 207 354 2.3E-28 T 31-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DY252_18835 f9ed09b9dc14525bbc13108a26458439 365 Gene3D G3DSA:2.40.37.10 4 365 1.7E-153 T 31-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DY252_18835 f9ed09b9dc14525bbc13108a26458439 365 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 238 321 3.4E-8 T 31-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 DY252_18835 f9ed09b9dc14525bbc13108a26458439 365 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 4 361 2.5E-124 T 31-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 DY252_18835 f9ed09b9dc14525bbc13108a26458439 365 PIRSF PIRSF038941 1 365 3.0E-136 T 31-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 DY252_18835 f9ed09b9dc14525bbc13108a26458439 365 Gene3D G3DSA:3.20.20.10 11 237 1.7E-153 T 31-10-2018 IPR029066 PLP-binding barrel DY252_11560 b350d8218e69fe6141caa56f91c31f6f 682 Gene3D G3DSA:3.30.9.10 362 584 7.6E-124 T 31-10-2018 DY252_11560 b350d8218e69fe6141caa56f91c31f6f 682 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 17 673 25.148 T 31-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 DY252_11560 b350d8218e69fe6141caa56f91c31f6f 682 SUPERFAMILY SSF51905 277 673 3.88E-32 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_11560 b350d8218e69fe6141caa56f91c31f6f 682 Pfam PF01266 FAD dependent oxidoreductase 279 648 7.9E-46 T 31-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DY252_11560 b350d8218e69fe6141caa56f91c31f6f 682 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 121 246 3.4E-35 T 31-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 DY252_11560 b350d8218e69fe6141caa56f91c31f6f 682 Gene3D G3DSA:3.50.50.60 278 675 7.6E-124 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_11560 b350d8218e69fe6141caa56f91c31f6f 682 SUPERFAMILY SSF54373 490 565 4.32E-5 T 31-10-2018 DY252_11560 b350d8218e69fe6141caa56f91c31f6f 682 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 279 677 6.2E-115 T 31-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 DY252_11560 b350d8218e69fe6141caa56f91c31f6f 682 Gene3D G3DSA:3.40.50.150 19 256 2.5E-88 T 31-10-2018 DY252_14605 0a00b2dbedec78ddea974de4c5a36c9c 238 SMART SM00895 96 221 1.5E-7 T 31-10-2018 IPR011711 GntR, C-terminal DY252_14605 0a00b2dbedec78ddea974de4c5a36c9c 238 Gene3D G3DSA:1.20.120.530 92 235 2.3E-16 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_14605 0a00b2dbedec78ddea974de4c5a36c9c 238 Gene3D G3DSA:1.10.10.10 22 87 7.7E-18 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_14605 0a00b2dbedec78ddea974de4c5a36c9c 238 SMART SM00345 28 86 7.6E-14 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_14605 0a00b2dbedec78ddea974de4c5a36c9c 238 SUPERFAMILY SSF48008 94 228 2.62E-16 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_14605 0a00b2dbedec78ddea974de4c5a36c9c 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 86 5.3E-15 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_14605 0a00b2dbedec78ddea974de4c5a36c9c 238 SUPERFAMILY SSF46785 21 103 8.24E-16 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_14605 0a00b2dbedec78ddea974de4c5a36c9c 238 Pfam PF07729 FCD domain 100 219 3.8E-15 T 31-10-2018 IPR011711 GntR, C-terminal DY252_07895 f56737889b9e689b22c02f0d002b9f08 380 Gene3D G3DSA:3.40.190.10 150 349 6.1E-68 T 31-10-2018 DY252_07895 f56737889b9e689b22c02f0d002b9f08 380 Pfam PF13416 Bacterial extracellular solute-binding protein 57 343 2.4E-22 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_07895 f56737889b9e689b22c02f0d002b9f08 380 SUPERFAMILY SSF53850 41 378 4.4E-57 T 31-10-2018 DY252_07895 f56737889b9e689b22c02f0d002b9f08 380 Gene3D G3DSA:3.40.190.10 46 348 6.1E-68 T 31-10-2018 DY252_07895 f56737889b9e689b22c02f0d002b9f08 380 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 9 31 2.7E-5 T 31-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DY252_07895 f56737889b9e689b22c02f0d002b9f08 380 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 90 104 6.3E-22 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_07895 f56737889b9e689b22c02f0d002b9f08 380 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 62 6.3E-22 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_07895 f56737889b9e689b22c02f0d002b9f08 380 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 141 157 6.3E-22 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_07895 f56737889b9e689b22c02f0d002b9f08 380 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 280 299 6.3E-22 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_07895 f56737889b9e689b22c02f0d002b9f08 380 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 62 83 6.3E-22 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_07895 f56737889b9e689b22c02f0d002b9f08 380 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 168 182 6.3E-22 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_20225 ab4a811f839796efe8f26f121af0cad6 185 SUPERFAMILY SSF47928 8 112 8.63E-23 T 31-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20225 ab4a811f839796efe8f26f121af0cad6 185 Pfam PF00213 ATP synthase delta (OSCP) subunit 11 179 1.6E-48 T 31-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20225 ab4a811f839796efe8f26f121af0cad6 185 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 13 179 2.8E-40 T 31-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20225 ab4a811f839796efe8f26f121af0cad6 185 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 143 162 - T 31-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20225 ab4a811f839796efe8f26f121af0cad6 185 Hamap MF_01416 ATP synthase subunit delta [atpD]. 6 183 18.992 T 31-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20225 ab4a811f839796efe8f26f121af0cad6 185 PRINTS PR00125 ATP synthase delta subunit signature 10 29 1.9E-26 T 31-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20225 ab4a811f839796efe8f26f121af0cad6 185 PRINTS PR00125 ATP synthase delta subunit signature 80 91 1.9E-26 T 31-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20225 ab4a811f839796efe8f26f121af0cad6 185 PRINTS PR00125 ATP synthase delta subunit signature 156 174 1.9E-26 T 31-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20225 ab4a811f839796efe8f26f121af0cad6 185 PRINTS PR00125 ATP synthase delta subunit signature 141 156 1.9E-26 T 31-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20225 ab4a811f839796efe8f26f121af0cad6 185 PRINTS PR00125 ATP synthase delta subunit signature 91 105 1.9E-26 T 31-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_20225 ab4a811f839796efe8f26f121af0cad6 185 Gene3D G3DSA:1.10.520.20 9 103 1.9E-21 T 31-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DY252_01415 b8c8823058cb8dcb0cef9424363890f1 136 SUPERFAMILY SSF55729 2 88 1.09E-8 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_01415 b8c8823058cb8dcb0cef9424363890f1 136 Gene3D G3DSA:3.40.630.30 1 134 1.1E-8 T 31-10-2018 DY252_07590 f9ad7beaa1cc7bec06cf8794a8d1eff2 283 SUPERFAMILY SSF161098 80 261 6.15E-33 T 31-10-2018 IPR035906 MetI-like superfamily DY252_07590 f9ad7beaa1cc7bec06cf8794a8d1eff2 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 272 9.2E-25 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_07590 f9ad7beaa1cc7bec06cf8794a8d1eff2 283 Gene3D G3DSA:1.10.3720.10 80 272 8.2E-24 T 31-10-2018 IPR035906 MetI-like superfamily DY252_16385 75090f13996a92e4915d52774a4b1c66 366 Pfam PF04773 FecR protein 157 249 4.7E-20 T 31-10-2018 IPR006860 FecR protein DY252_16385 75090f13996a92e4915d52774a4b1c66 366 PIRSF PIRSF018266 3 366 8.4E-71 T 31-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component DY252_16385 75090f13996a92e4915d52774a4b1c66 366 Pfam PF16220 Domain of unknown function (DUF4880) 15 54 3.2E-10 T 31-10-2018 IPR032623 FecR, N-terminal DY252_16385 75090f13996a92e4915d52774a4b1c66 366 Gene3D G3DSA:2.60.120.1440 148 287 2.9E-26 T 31-10-2018 DY252_04920 4334c748e42d72b338f1c442de2ea69d 382 Pfam PF13579 Glycosyl transferase 4-like domain 4 163 1.2E-14 T 31-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DY252_04920 4334c748e42d72b338f1c442de2ea69d 382 SUPERFAMILY SSF53756 3 375 2.27E-34 T 31-10-2018 DY252_04920 4334c748e42d72b338f1c442de2ea69d 382 Pfam PF13692 Glycosyl transferases group 1 200 343 1.6E-9 T 31-10-2018 DY252_04920 4334c748e42d72b338f1c442de2ea69d 382 Gene3D G3DSA:3.40.50.2000 1 195 7.8E-12 T 31-10-2018 DY252_04920 4334c748e42d72b338f1c442de2ea69d 382 Gene3D G3DSA:3.40.50.2000 196 362 3.2E-14 T 31-10-2018 DY252_19985 dd72c607c2a50ab2cdd674a76db82fa6 367 SMART SM01329 6 359 8.2E-197 T 31-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DY252_19985 dd72c607c2a50ab2cdd674a76db82fa6 367 SUPERFAMILY SSF53659 3 362 1.23E-120 T 31-10-2018 DY252_19985 dd72c607c2a50ab2cdd674a76db82fa6 367 Gene3D G3DSA:3.40.718.10 4 367 1.5E-144 T 31-10-2018 DY252_19985 dd72c607c2a50ab2cdd674a76db82fa6 367 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 363 51.231 T 31-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 DY252_19985 dd72c607c2a50ab2cdd674a76db82fa6 367 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 358 8.4E-156 T 31-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 DY252_19985 dd72c607c2a50ab2cdd674a76db82fa6 367 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 358 5.0E-133 T 31-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DY252_19985 dd72c607c2a50ab2cdd674a76db82fa6 367 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 245 264 - T 31-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DY252_15775 6c0a2e609bd82fda81046976bcf8857c 133 Pfam PF05610 Protein of unknown function (DUF779) 20 113 3.9E-49 T 31-10-2018 IPR008497 Protein of unknown function DUF779 DY252_15775 6c0a2e609bd82fda81046976bcf8857c 133 PIRSF PIRSF009151 1 128 1.0E-61 T 31-10-2018 IPR008497 Protein of unknown function DUF779 DY252_19200 3119b7978aa362e3e4a743c26bdc950e 688 Pfam PF00665 Integrase core domain 258 397 3.8E-15 T 31-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DY252_19200 3119b7978aa362e3e4a743c26bdc950e 688 Pfam PF09299 Mu transposase, C-terminal 488 548 4.5E-6 T 31-10-2018 IPR015378 Transposase-like, Mu, C-terminal DY252_19200 3119b7978aa362e3e4a743c26bdc950e 688 SUPERFAMILY SSF53098 258 398 2.09E-10 T 31-10-2018 IPR012337 Ribonuclease H-like superfamily DY252_19200 3119b7978aa362e3e4a743c26bdc950e 688 Gene3D G3DSA:3.30.420.10 250 453 3.5E-18 T 31-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DY252_08705 259cae9c8fdfaac94f6b7b68d96ce495 277 Gene3D G3DSA:1.10.3720.10 4 264 5.1E-59 T 31-10-2018 IPR035906 MetI-like superfamily DY252_08705 259cae9c8fdfaac94f6b7b68d96ce495 277 SUPERFAMILY SSF161098 7 277 6.8E-69 T 31-10-2018 IPR035906 MetI-like superfamily DY252_08705 259cae9c8fdfaac94f6b7b68d96ce495 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 270 1.9E-17 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_19860 e91d72af1caf60f9b7f836b9e14a0ac3 398 Gene3D G3DSA:3.40.50.1260 10 395 3.0E-147 T 31-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_19860 e91d72af1caf60f9b7f836b9e14a0ac3 398 PIRSF PIRSF000724 1 398 4.7E-141 T 31-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_19860 e91d72af1caf60f9b7f836b9e14a0ac3 398 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 16 26 - T 31-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_19860 e91d72af1caf60f9b7f836b9e14a0ac3 398 PRINTS PR00477 Phosphoglycerate kinase family signature 11 27 7.0E-74 T 31-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_19860 e91d72af1caf60f9b7f836b9e14a0ac3 398 PRINTS PR00477 Phosphoglycerate kinase family signature 32 54 7.0E-74 T 31-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_19860 e91d72af1caf60f9b7f836b9e14a0ac3 398 PRINTS PR00477 Phosphoglycerate kinase family signature 191 210 7.0E-74 T 31-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_19860 e91d72af1caf60f9b7f836b9e14a0ac3 398 PRINTS PR00477 Phosphoglycerate kinase family signature 168 190 7.0E-74 T 31-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_19860 e91d72af1caf60f9b7f836b9e14a0ac3 398 PRINTS PR00477 Phosphoglycerate kinase family signature 350 361 7.0E-74 T 31-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_19860 e91d72af1caf60f9b7f836b9e14a0ac3 398 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 7.0E-74 T 31-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_19860 e91d72af1caf60f9b7f836b9e14a0ac3 398 PRINTS PR00477 Phosphoglycerate kinase family signature 138 160 7.0E-74 T 31-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_19860 e91d72af1caf60f9b7f836b9e14a0ac3 398 PRINTS PR00477 Phosphoglycerate kinase family signature 313 338 7.0E-74 T 31-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_19860 e91d72af1caf60f9b7f836b9e14a0ac3 398 PRINTS PR00477 Phosphoglycerate kinase family signature 373 390 7.0E-74 T 31-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_19860 e91d72af1caf60f9b7f836b9e14a0ac3 398 Gene3D G3DSA:3.40.50.1260 170 387 3.0E-147 T 31-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_19860 e91d72af1caf60f9b7f836b9e14a0ac3 398 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 397 38.212 T 31-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_19860 e91d72af1caf60f9b7f836b9e14a0ac3 398 Pfam PF00162 Phosphoglycerate kinase 9 387 5.8E-145 T 31-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_19860 e91d72af1caf60f9b7f836b9e14a0ac3 398 SUPERFAMILY SSF53748 4 396 1.01E-144 T 31-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_11255 323bae761a1ede47740b24cc46881872 169 SUPERFAMILY SSF55729 1 161 2.7E-30 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_11255 323bae761a1ede47740b24cc46881872 169 Pfam PF13420 Acetyltransferase (GNAT) domain 3 143 2.1E-16 T 31-10-2018 DY252_11255 323bae761a1ede47740b24cc46881872 169 Gene3D G3DSA:3.40.630.30 1 165 2.3E-41 T 31-10-2018 DY252_12220 2e741c747bc910f69a66e718482f7cfa 390 SUPERFAMILY SSF82861 113 197 2.09E-9 T 31-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DY252_12220 2e741c747bc910f69a66e718482f7cfa 390 Pfam PF00924 Mechanosensitive ion channel 158 359 3.2E-55 T 31-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DY252_12220 2e741c747bc910f69a66e718482f7cfa 390 SUPERFAMILY SSF82689 265 370 1.28E-15 T 31-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DY252_12220 2e741c747bc910f69a66e718482f7cfa 390 Gene3D G3DSA:2.30.30.60 215 264 2.0E-12 T 31-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DY252_12220 2e741c747bc910f69a66e718482f7cfa 390 SUPERFAMILY SSF50182 198 264 3.6E-15 T 31-10-2018 IPR010920 LSM domain superfamily DY252_12220 2e741c747bc910f69a66e718482f7cfa 390 Gene3D G3DSA:3.30.70.100 265 364 8.1E-17 T 31-10-2018 DY252_17260 465b976fff753ba1f65007a29bccc202 356 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 46 344 7.1E-56 T 31-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 DY252_17260 465b976fff753ba1f65007a29bccc202 356 Gene3D G3DSA:3.20.20.190 39 351 1.7E-107 T 31-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DY252_17260 465b976fff753ba1f65007a29bccc202 356 SUPERFAMILY SSF51695 40 350 2.22E-78 T 31-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DY252_21555 ed2552872f6cd1e69b538022d4b3102c 499 Pfam PF02386 Cation transport protein 58 491 9.4E-51 T 31-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 DY252_21555 ed2552872f6cd1e69b538022d4b3102c 499 PIRSF PIRSF006247 16 499 7.3E-169 T 31-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 DY252_11225 dd27e50b092c9fd573a2889d407ef4ce 172 SUPERFAMILY SSF52540 1 164 4.59E-17 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_11225 dd27e50b092c9fd573a2889d407ef4ce 172 Pfam PF13671 AAA domain 2 119 1.2E-8 T 31-10-2018 DY252_11225 dd27e50b092c9fd573a2889d407ef4ce 172 Gene3D G3DSA:3.40.50.300 1 170 2.6E-24 T 31-10-2018 DY252_18915 d29e8b1a7bae4d7560d0b88c8f7e8358 226 SUPERFAMILY SSF46894 127 224 5.1E-19 T 31-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DY252_18915 d29e8b1a7bae4d7560d0b88c8f7e8358 226 SMART SM00862 150 224 1.9E-16 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_18915 d29e8b1a7bae4d7560d0b88c8f7e8358 226 Gene3D G3DSA:3.40.50.2300 1 124 7.2E-38 T 31-10-2018 DY252_18915 d29e8b1a7bae4d7560d0b88c8f7e8358 226 Gene3D G3DSA:1.10.10.10 125 226 1.5E-22 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_18915 d29e8b1a7bae4d7560d0b88c8f7e8358 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 4.0E-16 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_18915 d29e8b1a7bae4d7560d0b88c8f7e8358 226 SMART SM00448 7 118 1.6E-37 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_18915 d29e8b1a7bae4d7560d0b88c8f7e8358 226 SUPERFAMILY SSF52172 6 130 4.98E-38 T 31-10-2018 IPR011006 CheY-like superfamily DY252_18915 d29e8b1a7bae4d7560d0b88c8f7e8358 226 Pfam PF00072 Response regulator receiver domain 9 117 1.2E-25 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_03130 01ee7452b87baf606100115f2a0c958e 338 Pfam PF03561 Allantoicase repeat 193 334 1.4E-44 T 31-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 DY252_03130 01ee7452b87baf606100115f2a0c958e 338 Pfam PF03561 Allantoicase repeat 25 169 3.5E-43 T 31-10-2018 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 DY252_03130 01ee7452b87baf606100115f2a0c958e 338 PIRSF PIRSF016516 1 338 3.0E-142 T 31-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 DY252_03130 01ee7452b87baf606100115f2a0c958e 338 TIGRFAM TIGR02961 allantoicase: allantoicase 16 335 9.5E-136 T 31-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 DY252_03130 01ee7452b87baf606100115f2a0c958e 338 SUPERFAMILY SSF49785 14 172 7.23E-56 T 31-10-2018 IPR008979 Galactose-binding-like domain superfamily DY252_03130 01ee7452b87baf606100115f2a0c958e 338 Gene3D G3DSA:2.60.120.260 174 338 1.8E-53 T 31-10-2018 IPR008979 Galactose-binding-like domain superfamily DY252_03130 01ee7452b87baf606100115f2a0c958e 338 Gene3D G3DSA:2.60.120.260 2 173 4.8E-55 T 31-10-2018 IPR008979 Galactose-binding-like domain superfamily DY252_03130 01ee7452b87baf606100115f2a0c958e 338 SUPERFAMILY SSF49785 180 336 3.4E-53 T 31-10-2018 IPR008979 Galactose-binding-like domain superfamily DY252_03130 01ee7452b87baf606100115f2a0c958e 338 Hamap MF_00813 Probable allantoicase [alc]. 5 337 46.186 T 31-10-2018 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 DY252_16575 125932e11649c5277af226978db950a8 368 SUPERFAMILY SSF49899 215 365 9.16E-10 T 31-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DY252_16575 125932e11649c5277af226978db950a8 368 Gene3D G3DSA:2.60.120.200 224 368 1.1E-5 T 31-10-2018 DY252_16575 125932e11649c5277af226978db950a8 368 Gene3D G3DSA:2.60.120.260 54 201 2.8E-5 T 31-10-2018 IPR008979 Galactose-binding-like domain superfamily DY252_08050 92dd1861bbff2ff7222dbe082ec28ea6 298 Pfam PF13522 Glutamine amidotransferase domain 141 270 3.2E-21 T 31-10-2018 DY252_08050 92dd1861bbff2ff7222dbe082ec28ea6 298 SUPERFAMILY SSF56235 2 296 4.14E-47 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_18225 f106bc3e99237a14af692b8cbcae8e7b 602 Gene3D G3DSA:1.20.1560.10 8 347 5.4E-84 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_18225 f106bc3e99237a14af692b8cbcae8e7b 602 ProSitePatterns PS00211 ABC transporters family signature. 497 511 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_18225 f106bc3e99237a14af692b8cbcae8e7b 602 SUPERFAMILY SSF52540 351 596 5.9E-94 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18225 f106bc3e99237a14af692b8cbcae8e7b 602 Gene3D G3DSA:3.40.50.300 350 602 1.7E-94 T 31-10-2018 DY252_18225 f106bc3e99237a14af692b8cbcae8e7b 602 Pfam PF00664 ABC transporter transmembrane region 45 308 7.7E-47 T 31-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DY252_18225 f106bc3e99237a14af692b8cbcae8e7b 602 Pfam PF00005 ABC transporter 376 525 1.6E-36 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_18225 f106bc3e99237a14af692b8cbcae8e7b 602 SUPERFAMILY SSF90123 32 346 7.72E-76 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_18225 f106bc3e99237a14af692b8cbcae8e7b 602 SMART SM00382 385 571 7.6E-19 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_18990 d8030113712f54e25a5c6b37ad2b0891 178 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 43 172 3.3E-15 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_01610 1184ea3351da81f0a7acc9ba485fb1cf 107 SUPERFAMILY SSF52833 6 103 4.03E-27 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_01610 1184ea3351da81f0a7acc9ba485fb1cf 107 Gene3D G3DSA:3.40.30.10 7 105 3.4E-30 T 31-10-2018 DY252_04180 7ba2156cad96496c7ce168685ec8198f 146 PIRSF PIRSF001263 1 146 8.2E-51 T 31-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 DY252_04180 7ba2156cad96496c7ce168685ec8198f 146 SMART SM01116 74 146 1.8E-46 T 31-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 DY252_04180 7ba2156cad96496c7ce168685ec8198f 146 Pfam PF02560 Cyanate lyase C-terminal domain 78 144 5.1E-36 T 31-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 DY252_04180 7ba2156cad96496c7ce168685ec8198f 146 Gene3D G3DSA:3.30.1160.10 80 146 3.0E-34 T 31-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 DY252_04180 7ba2156cad96496c7ce168685ec8198f 146 TIGRFAM TIGR00673 cynS: cyanase 6 146 2.9E-51 T 31-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 DY252_04180 7ba2156cad96496c7ce168685ec8198f 146 Hamap MF_00535 Cyanate hydratase [cynS]. 1 146 69.358 T 31-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 DY252_04180 7ba2156cad96496c7ce168685ec8198f 146 SUPERFAMILY SSF47413 3 76 4.38E-18 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_04180 7ba2156cad96496c7ce168685ec8198f 146 Gene3D G3DSA:1.10.260.40 1 79 3.0E-22 T 31-10-2018 DY252_04180 7ba2156cad96496c7ce168685ec8198f 146 SUPERFAMILY SSF55234 79 146 2.48E-29 T 31-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 DY252_04180 7ba2156cad96496c7ce168685ec8198f 146 PRINTS PR01693 Cyanase signature 14 29 2.3E-30 T 31-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 DY252_04180 7ba2156cad96496c7ce168685ec8198f 146 PRINTS PR01693 Cyanase signature 34 51 2.3E-30 T 31-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 DY252_04180 7ba2156cad96496c7ce168685ec8198f 146 PRINTS PR01693 Cyanase signature 82 96 2.3E-30 T 31-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 DY252_04180 7ba2156cad96496c7ce168685ec8198f 146 PRINTS PR01693 Cyanase signature 100 116 2.3E-30 T 31-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 DY252_04180 7ba2156cad96496c7ce168685ec8198f 146 PRINTS PR01693 Cyanase signature 131 141 2.3E-30 T 31-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 DY252_15860 8ebdaa4246d162c06462a79c42a7e0d4 528 SMART SM00710 413 439 930.0 T 31-10-2018 IPR006626 Parallel beta-helix repeat DY252_15860 8ebdaa4246d162c06462a79c42a7e0d4 528 SMART SM00710 467 497 1600.0 T 31-10-2018 IPR006626 Parallel beta-helix repeat DY252_15860 8ebdaa4246d162c06462a79c42a7e0d4 528 SMART SM00710 440 466 31.0 T 31-10-2018 IPR006626 Parallel beta-helix repeat DY252_15860 8ebdaa4246d162c06462a79c42a7e0d4 528 Pfam PF11924 Inverse autotransporter, beta-domain 30 201 2.5E-17 T 31-10-2018 IPR024519 Inverse autotransporter, beta-domain DY252_15860 8ebdaa4246d162c06462a79c42a7e0d4 528 SUPERFAMILY SSF51126 326 513 4.71E-12 T 31-10-2018 IPR011050 Pectin lyase fold/virulence factor DY252_15860 8ebdaa4246d162c06462a79c42a7e0d4 528 Gene3D G3DSA:2.40.160.160 28 210 5.5E-14 T 31-10-2018 IPR038177 Inverse autotransporter, beta-domain superfamily DY252_15860 8ebdaa4246d162c06462a79c42a7e0d4 528 Gene3D G3DSA:2.160.20.10 296 521 2.6E-7 T 31-10-2018 IPR012334 Pectin lyase fold DY252_19070 d34c777aa69525775e0224ab02848b85 137 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 75 134 1.9E-8 T 31-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 DY252_19070 d34c777aa69525775e0224ab02848b85 137 Gene3D G3DSA:3.30.310.50 71 137 1.0E-6 T 31-10-2018 DY252_04935 661fdae5661137b17f896b76e44ff917 286 Gene3D G3DSA:3.40.50.720 2 283 1.7E-45 T 31-10-2018 DY252_04935 661fdae5661137b17f896b76e44ff917 286 SUPERFAMILY SSF51735 4 283 7.96E-55 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_04935 661fdae5661137b17f896b76e44ff917 286 Pfam PF04321 RmlD substrate binding domain 4 233 5.1E-25 T 31-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 DY252_14340 cfbb336e60966a18bb8c6aa50e5418b6 204 Pfam PF01810 LysE type translocator 12 201 6.5E-36 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_14340 cfbb336e60966a18bb8c6aa50e5418b6 204 PIRSF PIRSF006324 1 204 3.5E-46 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_03945 b70d472cb2e57d2a31cae7cdfd35ef92 459 Gene3D G3DSA:1.10.3720.10 224 457 4.3E-35 T 31-10-2018 IPR035906 MetI-like superfamily DY252_03945 b70d472cb2e57d2a31cae7cdfd35ef92 459 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 161 454 8.2E-86 T 31-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 DY252_03945 b70d472cb2e57d2a31cae7cdfd35ef92 459 Pfam PF12501 Phosphate ATP-binding cassette transporter 8 177 8.1E-37 T 31-10-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 DY252_03945 b70d472cb2e57d2a31cae7cdfd35ef92 459 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 249 446 5.5E-16 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_03945 b70d472cb2e57d2a31cae7cdfd35ef92 459 SUPERFAMILY SSF161098 186 446 2.49E-32 T 31-10-2018 IPR035906 MetI-like superfamily DY252_07285 ff5d4704365b5f9cef26afeb594b03eb 300 Gene3D G3DSA:3.40.50.150 92 298 1.0E-53 T 31-10-2018 DY252_07285 ff5d4704365b5f9cef26afeb594b03eb 300 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 31 286 2.8E-70 T 31-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 DY252_07285 ff5d4704365b5f9cef26afeb594b03eb 300 Pfam PF13847 Methyltransferase domain 119 253 3.2E-12 T 31-10-2018 IPR025714 Methyltransferase domain DY252_07285 ff5d4704365b5f9cef26afeb594b03eb 300 SUPERFAMILY SSF53335 9 288 1.76E-50 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_07285 ff5d4704365b5f9cef26afeb594b03eb 300 Gene3D G3DSA:1.10.8.10 8 91 2.2E-16 T 31-10-2018 DY252_07285 ff5d4704365b5f9cef26afeb594b03eb 300 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 12 290 1.0E-50 T 31-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 DY252_07285 ff5d4704365b5f9cef26afeb594b03eb 300 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 9 290 37.363 T 31-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 DY252_19790 42b17e55f18d3ccae8c8357329cc3da9 333 Gene3D G3DSA:3.90.1200.10 125 313 8.3E-19 T 31-10-2018 DY252_19790 42b17e55f18d3ccae8c8357329cc3da9 333 Pfam PF01636 Phosphotransferase enzyme family 39 273 2.8E-28 T 31-10-2018 IPR002575 Aminoglycoside phosphotransferase DY252_19790 42b17e55f18d3ccae8c8357329cc3da9 333 SUPERFAMILY SSF56112 17 307 1.33E-50 T 31-10-2018 IPR011009 Protein kinase-like domain superfamily DY252_02565 c1dd083bf075da26b258b3d35bdb0935 374 Pfam PF01636 Phosphotransferase enzyme family 31 281 3.4E-24 T 31-10-2018 IPR002575 Aminoglycoside phosphotransferase DY252_02565 c1dd083bf075da26b258b3d35bdb0935 374 SUPERFAMILY SSF56112 17 337 2.75E-32 T 31-10-2018 IPR011009 Protein kinase-like domain superfamily DY252_02565 c1dd083bf075da26b258b3d35bdb0935 374 Gene3D G3DSA:3.90.1200.10 113 361 1.4E-49 T 31-10-2018 DY252_02565 c1dd083bf075da26b258b3d35bdb0935 374 Gene3D G3DSA:3.30.200.20 7 112 1.0E-20 T 31-10-2018 DY252_21765 78965b0eed9e23db54d21831016358e6 217 SUPERFAMILY SSF46785 3 85 9.25E-16 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_21765 78965b0eed9e23db54d21831016358e6 217 SUPERFAMILY SSF48008 74 214 4.18E-18 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_21765 78965b0eed9e23db54d21831016358e6 217 Gene3D G3DSA:1.20.120.530 74 217 3.8E-22 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_21765 78965b0eed9e23db54d21831016358e6 217 SMART SM00345 10 68 1.1E-11 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_21765 78965b0eed9e23db54d21831016358e6 217 Gene3D G3DSA:1.10.10.10 1 69 7.6E-16 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_21765 78965b0eed9e23db54d21831016358e6 217 Pfam PF07729 FCD domain 78 209 1.2E-19 T 31-10-2018 IPR011711 GntR, C-terminal DY252_21765 78965b0eed9e23db54d21831016358e6 217 SMART SM00895 78 210 2.4E-13 T 31-10-2018 IPR011711 GntR, C-terminal DY252_21765 78965b0eed9e23db54d21831016358e6 217 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 3.2E-17 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_04270 e2260435a012ddbdae90e34630d1793d 498 SUPERFAMILY SSF53383 46 495 5.11E-103 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_04270 e2260435a012ddbdae90e34630d1793d 498 Gene3D G3DSA:3.90.1150.10 347 480 1.1E-39 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_04270 e2260435a012ddbdae90e34630d1793d 498 Pfam PF00266 Aminotransferase class-V 164 284 1.4E-9 T 31-10-2018 IPR000192 Aminotransferase class V domain DY252_04270 e2260435a012ddbdae90e34630d1793d 498 Gene3D G3DSA:3.40.640.10 91 326 1.5E-54 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_09830 7e66e4326d1e6a84018de17f38ff4175 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 580 590 5.5E-13 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_09830 7e66e4326d1e6a84018de17f38ff4175 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 630 5.5E-13 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_09830 7e66e4326d1e6a84018de17f38ff4175 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 611 5.5E-13 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_09830 7e66e4326d1e6a84018de17f38ff4175 668 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 576 5.5E-13 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_09830 7e66e4326d1e6a84018de17f38ff4175 668 SUPERFAMILY SSF47384 409 478 1.29E-13 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_09830 7e66e4326d1e6a84018de17f38ff4175 668 Pfam PF02743 Cache domain 47 312 3.9E-15 T 31-10-2018 IPR033479 Double Cache domain 1 DY252_09830 7e66e4326d1e6a84018de17f38ff4175 668 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 526 630 1.1E-18 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_09830 7e66e4326d1e6a84018de17f38ff4175 668 SMART SM00388 413 481 1.2E-11 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_09830 7e66e4326d1e6a84018de17f38ff4175 668 SUPERFAMILY SSF55874 472 630 1.44E-33 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_09830 7e66e4326d1e6a84018de17f38ff4175 668 Gene3D G3DSA:3.30.450.20 62 183 1.2E-64 T 31-10-2018 DY252_09830 7e66e4326d1e6a84018de17f38ff4175 668 PIRSF PIRSF036431 1 638 2.7E-184 T 31-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) DY252_09830 7e66e4326d1e6a84018de17f38ff4175 668 SMART SM00387 523 633 1.1E-26 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_09830 7e66e4326d1e6a84018de17f38ff4175 668 Gene3D G3DSA:3.30.565.10 481 634 4.7E-34 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_09830 7e66e4326d1e6a84018de17f38ff4175 668 Pfam PF00512 His Kinase A (phospho-acceptor) domain 413 478 3.6E-12 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_09830 7e66e4326d1e6a84018de17f38ff4175 668 Gene3D G3DSA:1.10.287.130 389 476 1.6E-23 T 31-10-2018 DY252_09830 7e66e4326d1e6a84018de17f38ff4175 668 SUPERFAMILY SSF103190 66 193 2.75E-19 T 31-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DY252_09830 7e66e4326d1e6a84018de17f38ff4175 668 Gene3D G3DSA:3.30.450.20 50 311 1.2E-64 T 31-10-2018 DY252_13835 e95c136227f5cfde1c8b1d3cd82f1457 410 Pfam PF12146 Serine aminopeptidase, S33 50 136 8.2E-11 T 31-10-2018 IPR022742 Serine aminopeptidase, S33 DY252_13835 e95c136227f5cfde1c8b1d3cd82f1457 410 SUPERFAMILY SSF82784 230 401 1.28E-39 T 31-10-2018 IPR036102 OsmC/Ohr superfamily DY252_13835 e95c136227f5cfde1c8b1d3cd82f1457 410 Gene3D G3DSA:3.30.300.20 268 408 8.4E-37 T 31-10-2018 IPR015946 K homology domain-like, alpha/beta DY252_13835 e95c136227f5cfde1c8b1d3cd82f1457 410 SUPERFAMILY SSF53474 5 253 7.22E-38 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_13835 e95c136227f5cfde1c8b1d3cd82f1457 410 Pfam PF02566 OsmC-like protein 300 399 6.3E-16 T 31-10-2018 IPR003718 OsmC/Ohr family DY252_13835 e95c136227f5cfde1c8b1d3cd82f1457 410 Gene3D G3DSA:3.40.50.1820 6 259 7.6E-53 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_05060 c15b915134dbf7046f255a3e2ea63064 205 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 13 73 4.2E-30 T 31-10-2018 IPR012909 PHA accumulation regulator DNA-binding, N-terminal DY252_05060 c15b915134dbf7046f255a3e2ea63064 205 Pfam PF05233 PHB accumulation regulatory domain 77 116 1.0E-17 T 31-10-2018 IPR007897 PHB accumulation regulatory DY252_05060 c15b915134dbf7046f255a3e2ea63064 205 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 13 117 1.7E-45 T 31-10-2018 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 Gene3D G3DSA:3.30.390.30 345 465 7.4E-45 T 31-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 465 7.0E-177 T 31-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 SUPERFAMILY SSF51905 3 369 2.04E-69 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.4E-36 T 31-10-2018 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.4E-36 T 31-10-2018 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 1.4E-36 T 31-10-2018 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 1.4E-36 T 31-10-2018 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 1.4E-36 T 31-10-2018 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 SUPERFAMILY SSF55424 342 464 3.09E-41 T 31-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 2.7E-66 T 31-10-2018 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 2.7E-66 T 31-10-2018 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 2.7E-66 T 31-10-2018 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 2.7E-66 T 31-10-2018 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 2.7E-66 T 31-10-2018 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 2.7E-66 T 31-10-2018 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 2.7E-66 T 31-10-2018 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.7E-66 T 31-10-2018 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 2.7E-66 T 31-10-2018 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 Gene3D G3DSA:3.50.50.60 150 272 8.9E-115 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 325 6.8E-69 T 31-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 454 1.6E-38 T 31-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 31-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 PIRSF PIRSF000350 1 459 2.8E-81 T 31-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DY252_13180 35bcce6b552a6cd17fd0e08bf3f82aff 465 Gene3D G3DSA:3.50.50.60 6 330 8.9E-115 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 625 740 5.2E-17 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 Pfam PF00512 His Kinase A (phospho-acceptor) domain 515 580 7.3E-9 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 SUPERFAMILY SSF55785 394 497 8.03E-11 T 31-10-2018 IPR035965 PAS domain superfamily DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 SUPERFAMILY SSF47384 505 582 9.61E-12 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 702 720 2.1E-13 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 673 687 2.1E-13 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 726 739 2.1E-13 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 691 701 2.1E-13 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 Gene3D G3DSA:3.30.450.20 386 501 5.4E-11 T 31-10-2018 DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 Pfam PF00989 PAS fold 397 501 2.9E-5 T 31-10-2018 IPR013767 PAS fold GO:0006355 DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 Pfam PF00672 HAMP domain 329 377 3.1E-9 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 SMART SM00304 328 381 7.1E-14 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 Gene3D G3DSA:3.30.565.10 585 747 2.7E-32 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 Gene3D G3DSA:1.10.287.130 502 580 6.3E-13 T 31-10-2018 DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 SMART SM00388 512 583 3.1E-10 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 PIRSF PIRSF037532 18 745 5.9E-235 T 31-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 SMART SM00387 624 742 5.1E-27 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 SUPERFAMILY SSF158472 329 378 1.83E-9 T 31-10-2018 DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 SUPERFAMILY SSF55874 576 741 9.17E-32 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_12765 1a8ef10d63259e61b8fa0cbd0c1c7a73 758 Gene3D G3DSA:1.20.1480.50 291 385 3.6E-11 T 31-10-2018 DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 Gene3D G3DSA:3.50.50.60 9 305 1.0E-119 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 Gene3D G3DSA:3.50.50.60 119 245 1.0E-119 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 3.2E-77 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 274 292 3.2E-77 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 3.2E-77 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 3.2E-77 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 3.2E-77 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 3.2E-77 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 3.2E-77 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 3.2E-77 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 197 213 3.2E-77 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 6.9E-53 T 31-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 311 1.0E-123 T 31-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 137 157 - T 31-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 SUPERFAMILY SSF51905 2 309 2.43E-52 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 1.2E-38 T 31-10-2018 DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.2E-38 T 31-10-2018 DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.2E-38 T 31-10-2018 DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.2E-38 T 31-10-2018 DY252_05505 edb57a7ef4fd5f4590f110478a69ede5 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 1.2E-38 T 31-10-2018 DY252_13665 627ce64bf0a6cf1c95efc051c806e493 64 PIRSF PIRSF037205 7 58 1.3E-24 T 31-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 DY252_13665 627ce64bf0a6cf1c95efc051c806e493 64 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 11 50 9.6E-21 T 31-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 DY252_12430 3c0bad18231eb4ff7bcf71a464927134 368 SMART SM00382 40 202 4.2E-4 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_12430 3c0bad18231eb4ff7bcf71a464927134 368 SUPERFAMILY SSF52540 34 247 4.99E-41 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12430 3c0bad18231eb4ff7bcf71a464927134 368 Pfam PF13177 DNA polymerase III, delta subunit 24 202 9.9E-36 T 31-10-2018 DY252_12430 3c0bad18231eb4ff7bcf71a464927134 368 Gene3D G3DSA:3.40.50.300 21 202 6.8E-46 T 31-10-2018 DY252_07005 6b41095ed0e1bdb3b9607407031ab600 322 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 13 292 2.5E-72 T 31-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DY252_07005 6b41095ed0e1bdb3b9607407031ab600 322 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 13 306 26.572 T 31-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DY252_07005 6b41095ed0e1bdb3b9607407031ab600 322 SUPERFAMILY SSF52540 14 184 1.54E-20 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07005 6b41095ed0e1bdb3b9607407031ab600 322 Pfam PF01715 IPP transferase 46 291 9.4E-67 T 31-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DY252_07005 6b41095ed0e1bdb3b9607407031ab600 322 Gene3D G3DSA:1.10.20.140 120 193 4.8E-87 T 31-10-2018 DY252_07005 6b41095ed0e1bdb3b9607407031ab600 322 Gene3D G3DSA:3.40.50.300 17 290 4.8E-87 T 31-10-2018 DY252_16285 f8d42f2c305d16ec6c019072d655ba2d 354 Gene3D G3DSA:2.60.120.1440 152 271 3.2E-14 T 31-10-2018 DY252_16285 f8d42f2c305d16ec6c019072d655ba2d 354 PIRSF PIRSF018266 7 354 6.5E-49 T 31-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component DY252_16285 f8d42f2c305d16ec6c019072d655ba2d 354 Pfam PF04773 FecR protein 160 239 9.7E-15 T 31-10-2018 IPR006860 FecR protein DY252_09955 358eb93b68c13681792d7aa843fedd6a 588 SUPERFAMILY SSF52091 457 569 1.33E-18 T 31-10-2018 IPR036513 STAS domain superfamily DY252_09955 358eb93b68c13681792d7aa843fedd6a 588 TIGRFAM TIGR00815 sulP: sulfate permease 11 556 4.6E-135 T 31-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 DY252_09955 358eb93b68c13681792d7aa843fedd6a 588 Gene3D G3DSA:3.30.750.24 437 571 7.5E-27 T 31-10-2018 IPR036513 STAS domain superfamily DY252_09955 358eb93b68c13681792d7aa843fedd6a 588 Pfam PF00916 Sulfate permease family 24 407 1.3E-101 T 31-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 DY252_09955 358eb93b68c13681792d7aa843fedd6a 588 Pfam PF01740 STAS domain 461 560 5.1E-18 T 31-10-2018 IPR002645 STAS domain DY252_18425 d20ad4c7196835574bd77e913b37313e 153 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 62 76 - T 31-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 DY252_18425 d20ad4c7196835574bd77e913b37313e 153 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 2 123 15.313 T 31-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DY252_18425 d20ad4c7196835574bd77e913b37313e 153 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 9 98 2.0E-4 T 31-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DY252_18425 d20ad4c7196835574bd77e913b37313e 153 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 117 9.8E-16 T 31-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DY252_18425 d20ad4c7196835574bd77e913b37313e 153 SUPERFAMILY SSF54211 6 120 5.82E-24 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_18425 d20ad4c7196835574bd77e913b37313e 153 Gene3D G3DSA:3.30.230.10 3 125 4.6E-25 T 31-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DY252_18425 d20ad4c7196835574bd77e913b37313e 153 Pfam PF00825 Ribonuclease P 6 119 1.1E-22 T 31-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DY252_09335 0bbcbc81707bf06b4d8de0e7aabb7244 266 SUPERFAMILY SSF53850 27 263 3.09E-89 T 31-10-2018 DY252_09335 0bbcbc81707bf06b4d8de0e7aabb7244 266 Gene3D G3DSA:3.40.190.10 28 256 2.8E-99 T 31-10-2018 DY252_09335 0bbcbc81707bf06b4d8de0e7aabb7244 266 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 23 259 4.5E-80 T 31-10-2018 IPR004872 Lipoprotein NlpA family DY252_09335 0bbcbc81707bf06b4d8de0e7aabb7244 266 Gene3D G3DSA:3.40.190.10 108 212 2.8E-99 T 31-10-2018 DY252_09335 0bbcbc81707bf06b4d8de0e7aabb7244 266 PIRSF PIRSF002854 1 263 3.1E-103 T 31-10-2018 IPR004872 Lipoprotein NlpA family DY252_09335 0bbcbc81707bf06b4d8de0e7aabb7244 266 Pfam PF03180 NLPA lipoprotein 27 262 4.3E-94 T 31-10-2018 IPR004872 Lipoprotein NlpA family DY252_20570 148cbe90cf902d3d19c8c70e7712e8aa 233 TIGRFAM TIGR03223 Phn_opern_protn: putative phosphonate metabolism protein 6 232 1.1E-79 T 31-10-2018 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DY252_20570 148cbe90cf902d3d19c8c70e7712e8aa 233 Pfam PF06299 Protein of unknown function (DUF1045) 66 224 1.3E-53 T 31-10-2018 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DY252_20570 148cbe90cf902d3d19c8c70e7712e8aa 233 PIRSF PIRSF033328 6 233 7.0E-57 T 31-10-2018 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DY252_00620 5c4400e5f0843aec88b7c1bb80d875ee 402 SUPERFAMILY SSF103473 8 386 3.92E-57 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_00620 5c4400e5f0843aec88b7c1bb80d875ee 402 Pfam PF07690 Major Facilitator Superfamily 19 350 3.1E-40 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_00620 5c4400e5f0843aec88b7c1bb80d875ee 402 Gene3D G3DSA:1.20.1250.20 14 208 1.2E-28 T 31-10-2018 DY252_00620 5c4400e5f0843aec88b7c1bb80d875ee 402 Gene3D G3DSA:1.20.1250.20 209 389 1.0E-18 T 31-10-2018 DY252_19785 c92bac97cd0b44aaab35b1b9abf06a11 444 SUPERFAMILY SSF53383 39 440 1.93E-92 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_19785 c92bac97cd0b44aaab35b1b9abf06a11 444 Gene3D G3DSA:3.40.640.10 80 338 4.4E-119 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_19785 c92bac97cd0b44aaab35b1b9abf06a11 444 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 253 291 - T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_19785 c92bac97cd0b44aaab35b1b9abf06a11 444 PIRSF PIRSF000521 150 443 1.0E-26 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_19785 c92bac97cd0b44aaab35b1b9abf06a11 444 PIRSF PIRSF000521 39 170 8.1E-6 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_19785 c92bac97cd0b44aaab35b1b9abf06a11 444 Pfam PF00202 Aminotransferase class-III 49 439 1.2E-70 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_19785 c92bac97cd0b44aaab35b1b9abf06a11 444 Gene3D G3DSA:3.90.1150.10 47 436 4.4E-119 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_00145 91008113d3f24ede6188be7de48e15b4 604 Pfam PF00664 ABC transporter transmembrane region 55 306 3.5E-9 T 31-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DY252_00145 91008113d3f24ede6188be7de48e15b4 604 SMART SM00382 381 567 3.2E-11 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_00145 91008113d3f24ede6188be7de48e15b4 604 SUPERFAMILY SSF52540 346 579 2.07E-61 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_00145 91008113d3f24ede6188be7de48e15b4 604 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_00145 91008113d3f24ede6188be7de48e15b4 604 SUPERFAMILY SSF90123 43 337 1.7E-33 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_00145 91008113d3f24ede6188be7de48e15b4 604 Gene3D G3DSA:1.20.1560.10 42 340 1.2E-25 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_00145 91008113d3f24ede6188be7de48e15b4 604 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 49 581 2.0E-180 T 31-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 DY252_00145 91008113d3f24ede6188be7de48e15b4 604 Gene3D G3DSA:3.40.50.300 341 586 4.2E-66 T 31-10-2018 DY252_00145 91008113d3f24ede6188be7de48e15b4 604 Pfam PF00005 ABC transporter 372 519 1.0E-27 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_15980 c3886eb3cbddc8ae69d497aeec83ddf8 706 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 396 516 2.4E-10 T 31-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DY252_15980 c3886eb3cbddc8ae69d497aeec83ddf8 706 SUPERFAMILY SSF51735 386 530 1.07E-30 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_15980 c3886eb3cbddc8ae69d497aeec83ddf8 706 Gene3D G3DSA:3.40.50.720 384 509 5.0E-23 T 31-10-2018 DY252_15980 c3886eb3cbddc8ae69d497aeec83ddf8 706 SUPERFAMILY SSF50129 8 189 1.77E-19 T 31-10-2018 IPR011032 GroES-like superfamily DY252_15980 c3886eb3cbddc8ae69d497aeec83ddf8 706 Gene3D G3DSA:3.40.50.720 168 293 6.1E-24 T 31-10-2018 DY252_15980 c3886eb3cbddc8ae69d497aeec83ddf8 706 SUPERFAMILY SSF51735 158 336 2.53E-15 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_15980 c3886eb3cbddc8ae69d497aeec83ddf8 706 Gene3D G3DSA:3.90.180.10 136 354 6.1E-24 T 31-10-2018 DY252_15980 c3886eb3cbddc8ae69d497aeec83ddf8 706 Gene3D G3DSA:3.30.360.10 517 702 1.7E-18 T 31-10-2018 DY252_13170 94a337f1bb9fd7463469a70e39f2aed3 154 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 1.8E-32 T 31-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 DY252_13170 94a337f1bb9fd7463469a70e39f2aed3 154 SUPERFAMILY SSF55961 5 143 3.3E-34 T 31-10-2018 DY252_13170 94a337f1bb9fd7463469a70e39f2aed3 154 Gene3D G3DSA:3.30.530.20 2 144 2.4E-47 T 31-10-2018 IPR023393 START-like domain superfamily DY252_10130 73289e088707e8398479489da3db8d29 665 Gene3D G3DSA:2.60.40.2380 68 211 1.3E-14 T 31-10-2018 DY252_10130 73289e088707e8398479489da3db8d29 665 Pfam PF07696 7TMR-DISM extracellular 2 71 204 2.1E-22 T 31-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 DY252_10130 73289e088707e8398479489da3db8d29 665 Gene3D G3DSA:1.10.287.130 433 512 4.1E-11 T 31-10-2018 DY252_10130 73289e088707e8398479489da3db8d29 665 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 652 8.9E-6 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_10130 73289e088707e8398479489da3db8d29 665 Pfam PF00512 His Kinase A (phospho-acceptor) domain 447 505 2.4E-7 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_10130 73289e088707e8398479489da3db8d29 665 SMART SM00388 446 513 2.0E-5 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_10130 73289e088707e8398479489da3db8d29 665 Gene3D G3DSA:3.30.565.10 517 663 1.5E-15 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_10130 73289e088707e8398479489da3db8d29 665 SUPERFAMILY SSF47384 433 506 8.44E-12 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_10130 73289e088707e8398479489da3db8d29 665 SUPERFAMILY SSF55874 515 664 3.81E-14 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_10130 73289e088707e8398479489da3db8d29 665 SMART SM00387 556 664 9.5E-6 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_10130 73289e088707e8398479489da3db8d29 665 Pfam PF07695 7TM diverse intracellular signalling 220 413 5.2E-10 T 31-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 DY252_04765 b6b789146646a33811653eedcaa143ec 426 Pfam PF07690 Major Facilitator Superfamily 48 372 1.3E-13 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_04765 b6b789146646a33811653eedcaa143ec 426 Gene3D G3DSA:1.20.1250.20 227 410 1.9E-15 T 31-10-2018 DY252_04765 b6b789146646a33811653eedcaa143ec 426 SUPERFAMILY SSF103473 40 405 2.22E-35 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_04765 b6b789146646a33811653eedcaa143ec 426 Gene3D G3DSA:1.20.1250.20 39 224 9.5E-6 T 31-10-2018 DY252_11420 24e2ca14765f085d7542dc147dd16413 323 Pfam PF01479 S4 domain 17 62 5.8E-9 T 31-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_11420 24e2ca14765f085d7542dc147dd16413 323 Gene3D G3DSA:3.10.290.10 3 71 2.8E-16 T 31-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DY252_11420 24e2ca14765f085d7542dc147dd16413 323 Gene3D G3DSA:3.30.2350.10 73 309 4.2E-73 T 31-10-2018 DY252_11420 24e2ca14765f085d7542dc147dd16413 323 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 137 151 - T 31-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_11420 24e2ca14765f085d7542dc147dd16413 323 SUPERFAMILY SSF55174 16 104 1.58E-11 T 31-10-2018 DY252_11420 24e2ca14765f085d7542dc147dd16413 323 SMART SM00363 16 81 9.0E-8 T 31-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_11420 24e2ca14765f085d7542dc147dd16413 323 Pfam PF00849 RNA pseudouridylate synthase 90 250 1.4E-35 T 31-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_11420 24e2ca14765f085d7542dc147dd16413 323 SUPERFAMILY SSF55120 75 320 1.52E-71 T 31-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_11420 24e2ca14765f085d7542dc147dd16413 323 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 13 319 1.2E-93 T 31-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_00410 3cd71548ac6b676150e42eb62bc2fedf 215 Gene3D G3DSA:3.40.30.10 36 182 1.4E-7 T 31-10-2018 DY252_00410 3cd71548ac6b676150e42eb62bc2fedf 215 SUPERFAMILY SSF52833 43 170 3.91E-8 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_06580 3c457bfc643b24cc50e25041f756b2f4 250 SUPERFAMILY SSF51735 1 228 3.62E-61 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_06580 3c457bfc643b24cc50e25041f756b2f4 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.0E-8 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_06580 3c457bfc643b24cc50e25041f756b2f4 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.0E-8 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_06580 3c457bfc643b24cc50e25041f756b2f4 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 3.0E-8 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_06580 3c457bfc643b24cc50e25041f756b2f4 250 Pfam PF00106 short chain dehydrogenase 7 197 1.3E-50 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_06580 3c457bfc643b24cc50e25041f756b2f4 250 Gene3D G3DSA:3.40.50.720 1 244 2.1E-62 T 31-10-2018 DY252_06580 3c457bfc643b24cc50e25041f756b2f4 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.0E-25 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_06580 3c457bfc643b24cc50e25041f756b2f4 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.0E-25 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_06580 3c457bfc643b24cc50e25041f756b2f4 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.0E-25 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_06580 3c457bfc643b24cc50e25041f756b2f4 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.0E-25 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_06580 3c457bfc643b24cc50e25041f756b2f4 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.0E-25 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_06580 3c457bfc643b24cc50e25041f756b2f4 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.0E-25 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08740 9672ac972e29451783ddd3acc68e52ad 213 Gene3D G3DSA:3.20.20.70 2 210 1.3E-72 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_08740 9672ac972e29451783ddd3acc68e52ad 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 207 7.4E-78 T 31-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DY252_08740 9672ac972e29451783ddd3acc68e52ad 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 125 138 - T 31-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DY252_08740 9672ac972e29451783ddd3acc68e52ad 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 37 46 - T 31-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DY252_08740 9672ac972e29451783ddd3acc68e52ad 213 Pfam PF01081 KDPG and KHG aldolase 7 200 9.9E-74 T 31-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DY252_08740 9672ac972e29451783ddd3acc68e52ad 213 SUPERFAMILY SSF51569 6 208 1.39E-68 T 31-10-2018 DY252_08895 eddabdb5f60a24775b8f82c95dfdfe19 396 Gene3D G3DSA:3.40.50.300 1 205 9.6E-72 T 31-10-2018 DY252_08895 eddabdb5f60a24775b8f82c95dfdfe19 396 SUPERFAMILY SSF52540 6 221 6.9E-61 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_08895 eddabdb5f60a24775b8f82c95dfdfe19 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 9.3E-17 T 31-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DY252_08895 eddabdb5f60a24775b8f82c95dfdfe19 396 Gene3D G3DSA:2.40.30.10 340 395 7.1E-29 T 31-10-2018 DY252_08895 eddabdb5f60a24775b8f82c95dfdfe19 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 31-10-2018 IPR031157 Tr-type G domain, conserved site DY252_08895 eddabdb5f60a24775b8f82c95dfdfe19 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 3.1E-226 T 31-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DY252_08895 eddabdb5f60a24775b8f82c95dfdfe19 396 SUPERFAMILY SSF50465 304 396 5.47E-35 T 31-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DY252_08895 eddabdb5f60a24775b8f82c95dfdfe19 396 Gene3D G3DSA:2.40.30.10 209 336 2.7E-51 T 31-10-2018 DY252_08895 eddabdb5f60a24775b8f82c95dfdfe19 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.2E-14 T 31-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DY252_08895 eddabdb5f60a24775b8f82c95dfdfe19 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.9E-58 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_08895 eddabdb5f60a24775b8f82c95dfdfe19 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 7.7E-32 T 31-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DY252_08895 eddabdb5f60a24775b8f82c95dfdfe19 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.721 T 31-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DY252_08895 eddabdb5f60a24775b8f82c95dfdfe19 396 SUPERFAMILY SSF50447 207 303 1.3E-30 T 31-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DY252_08895 eddabdb5f60a24775b8f82c95dfdfe19 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.3E-23 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_08895 eddabdb5f60a24775b8f82c95dfdfe19 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.3E-23 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_08895 eddabdb5f60a24775b8f82c95dfdfe19 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.3E-23 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_08895 eddabdb5f60a24775b8f82c95dfdfe19 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.3E-23 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_08895 eddabdb5f60a24775b8f82c95dfdfe19 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.3E-23 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_08140 b6566d8e7115f67f0bd888680568517a 307 SMART SM00450 32 157 2.8E-16 T 31-10-2018 IPR001763 Rhodanese-like domain DY252_08140 b6566d8e7115f67f0bd888680568517a 307 SMART SM00450 179 301 4.5E-9 T 31-10-2018 IPR001763 Rhodanese-like domain DY252_08140 b6566d8e7115f67f0bd888680568517a 307 Gene3D G3DSA:3.40.250.10 177 304 1.7E-27 T 31-10-2018 IPR036873 Rhodanese-like domain superfamily DY252_08140 b6566d8e7115f67f0bd888680568517a 307 Pfam PF00581 Rhodanese-like domain 182 297 3.9E-10 T 31-10-2018 IPR001763 Rhodanese-like domain DY252_08140 b6566d8e7115f67f0bd888680568517a 307 Pfam PF00581 Rhodanese-like domain 34 153 4.0E-14 T 31-10-2018 IPR001763 Rhodanese-like domain DY252_08140 b6566d8e7115f67f0bd888680568517a 307 SUPERFAMILY SSF52821 29 178 4.58E-32 T 31-10-2018 IPR036873 Rhodanese-like domain superfamily DY252_08140 b6566d8e7115f67f0bd888680568517a 307 SUPERFAMILY SSF52821 175 304 5.5E-26 T 31-10-2018 IPR036873 Rhodanese-like domain superfamily DY252_08140 b6566d8e7115f67f0bd888680568517a 307 Gene3D G3DSA:3.40.250.10 18 174 1.0E-38 T 31-10-2018 IPR036873 Rhodanese-like domain superfamily DY252_03335 e50b2cbad17dd7df4a91f0ecdeea9051 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 8.2E-40 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_03335 e50b2cbad17dd7df4a91f0ecdeea9051 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.2E-40 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_03335 e50b2cbad17dd7df4a91f0ecdeea9051 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 8.2E-40 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_03335 e50b2cbad17dd7df4a91f0ecdeea9051 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 8.2E-40 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_03335 e50b2cbad17dd7df4a91f0ecdeea9051 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 8.2E-40 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_03335 e50b2cbad17dd7df4a91f0ecdeea9051 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 8.2E-40 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_03335 e50b2cbad17dd7df4a91f0ecdeea9051 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 258 5.2E-61 T 31-10-2018 DY252_03335 e50b2cbad17dd7df4a91f0ecdeea9051 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_03335 e50b2cbad17dd7df4a91f0ecdeea9051 260 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 5 260 1.1E-105 T 31-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 DY252_03335 e50b2cbad17dd7df4a91f0ecdeea9051 260 Gene3D G3DSA:3.40.50.720 1 260 1.7E-84 T 31-10-2018 DY252_03335 e50b2cbad17dd7df4a91f0ecdeea9051 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 9.4E-12 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_03335 e50b2cbad17dd7df4a91f0ecdeea9051 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 9.4E-12 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_03335 e50b2cbad17dd7df4a91f0ecdeea9051 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 9.4E-12 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_03335 e50b2cbad17dd7df4a91f0ecdeea9051 260 SUPERFAMILY SSF51735 4 259 3.17E-81 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_00250 7568121a871a4d934957c5f534d5322c 432 SUPERFAMILY SSF51658 53 409 1.27E-80 T 31-10-2018 IPR036237 Xylose isomerase-like superfamily DY252_00250 7568121a871a4d934957c5f534d5322c 432 TIGRFAM TIGR02629 L_rham_iso_rhiz: L-rhamnose catabolism isomerase 12 423 5.5E-229 T 31-10-2018 IPR013451 L-rhamnose catabolism isomerase DY252_00250 7568121a871a4d934957c5f534d5322c 432 Gene3D G3DSA:3.20.20.150 3 423 6.4E-141 T 31-10-2018 DY252_14945 31169e498d24683092185ee2d72bc5a3 560 SUPERFAMILY SSF58104 237 553 3.79E-58 T 31-10-2018 DY252_14945 31169e498d24683092185ee2d72bc5a3 560 Gene3D G3DSA:1.10.287.950 274 560 4.4E-51 T 31-10-2018 DY252_14945 31169e498d24683092185ee2d72bc5a3 560 Gene3D G3DSA:1.20.1480.50 167 270 5.4E-17 T 31-10-2018 DY252_14945 31169e498d24683092185ee2d72bc5a3 560 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 377 522 1.9E-29 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_14945 31169e498d24683092185ee2d72bc5a3 560 SMART SM00304 211 264 1.4E-7 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_14945 31169e498d24683092185ee2d72bc5a3 560 Pfam PF05227 CHASE3 domain 72 173 6.2E-8 T 31-10-2018 IPR007891 CHASE3 DY252_14945 31169e498d24683092185ee2d72bc5a3 560 Pfam PF00672 HAMP domain 211 260 7.2E-10 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_14945 31169e498d24683092185ee2d72bc5a3 560 SMART SM00283 307 554 5.9E-38 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_14945 31169e498d24683092185ee2d72bc5a3 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 427 456 3.8E-12 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_14945 31169e498d24683092185ee2d72bc5a3 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 475 504 3.8E-12 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_14945 31169e498d24683092185ee2d72bc5a3 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 357 3.8E-12 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_01565 c8014ad29aeec7b849210e1c78b58173 242 Pfam PF01810 LysE type translocator 44 236 8.4E-30 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_09390 8c9be87ad5246aa2d9e75d2170b5cbe7 635 SMART SM00382 26 220 3.9E-11 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_09390 8c9be87ad5246aa2d9e75d2170b5cbe7 635 SMART SM00382 335 502 5.1E-8 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_09390 8c9be87ad5246aa2d9e75d2170b5cbe7 635 ProSitePatterns PS00211 ABC transporters family signature. 429 443 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_09390 8c9be87ad5246aa2d9e75d2170b5cbe7 635 Pfam PF00005 ABC transporter 17 175 8.3E-25 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_09390 8c9be87ad5246aa2d9e75d2170b5cbe7 635 Pfam PF12848 ABC transporter 214 285 5.5E-26 T 31-10-2018 IPR032781 ABC-transporter extension domain DY252_09390 8c9be87ad5246aa2d9e75d2170b5cbe7 635 SUPERFAMILY SSF52540 2 247 6.53E-52 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_09390 8c9be87ad5246aa2d9e75d2170b5cbe7 635 Pfam PF00005 ABC transporter 326 457 2.3E-18 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_09390 8c9be87ad5246aa2d9e75d2170b5cbe7 635 Gene3D G3DSA:1.10.287.380 547 629 4.9E-6 T 31-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DY252_09390 8c9be87ad5246aa2d9e75d2170b5cbe7 635 Gene3D G3DSA:3.40.50.300 272 533 3.9E-51 T 31-10-2018 DY252_09390 8c9be87ad5246aa2d9e75d2170b5cbe7 635 Gene3D G3DSA:3.40.50.300 1 257 2.9E-63 T 31-10-2018 DY252_09390 8c9be87ad5246aa2d9e75d2170b5cbe7 635 SUPERFAMILY SSF52540 295 508 9.41E-41 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_09390 8c9be87ad5246aa2d9e75d2170b5cbe7 635 Pfam PF16326 ABC transporter C-terminal domain 564 624 3.0E-12 T 31-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 DY252_09390 8c9be87ad5246aa2d9e75d2170b5cbe7 635 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_21515 09b5acd75567475adeb6c016e0491724 130 Hamap MF_00791 Protein ApaG [apaG]. 2 130 31.855 T 31-10-2018 IPR023065 Uncharacterised protein family ApaG DY252_21515 09b5acd75567475adeb6c016e0491724 130 SUPERFAMILY SSF110069 5 127 2.88E-48 T 31-10-2018 IPR036767 ApaG domain superfamily DY252_21515 09b5acd75567475adeb6c016e0491724 130 Pfam PF04379 ApaG domain 20 104 5.6E-36 T 31-10-2018 IPR007474 ApaG domain DY252_21515 09b5acd75567475adeb6c016e0491724 130 Gene3D G3DSA:2.60.40.1470 2 130 4.7E-50 T 31-10-2018 IPR036767 ApaG domain superfamily DY252_10395 1a952961b94b1a72f671b78c76da6295 377 Gene3D G3DSA:3.40.190.290 263 367 2.0E-13 T 31-10-2018 DY252_10395 1a952961b94b1a72f671b78c76da6295 377 Gene3D G3DSA:3.40.190.290 96 262 7.9E-25 T 31-10-2018 DY252_10395 1a952961b94b1a72f671b78c76da6295 377 Gene3D G3DSA:1.10.10.10 5 95 1.2E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_10395 1a952961b94b1a72f671b78c76da6295 377 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 9.3E-18 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_10395 1a952961b94b1a72f671b78c76da6295 377 SUPERFAMILY SSF53850 92 236 4.93E-25 T 31-10-2018 DY252_10395 1a952961b94b1a72f671b78c76da6295 377 SUPERFAMILY SSF53850 282 367 9.93E-14 T 31-10-2018 DY252_10395 1a952961b94b1a72f671b78c76da6295 377 Pfam PF03466 LysR substrate binding domain 91 211 1.4E-24 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_10395 1a952961b94b1a72f671b78c76da6295 377 Pfam PF03466 LysR substrate binding domain 282 363 8.2E-13 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_10395 1a952961b94b1a72f671b78c76da6295 377 SUPERFAMILY SSF46785 5 115 1.97E-22 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_07035 fe61f1154e2fe7012024faa0a5ea2ab3 394 Gene3D G3DSA:3.30.300.130 1 95 2.4E-10 T 31-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DY252_07035 fe61f1154e2fe7012024faa0a5ea2ab3 394 SUPERFAMILY SSF52540 126 374 3.91E-58 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07035 fe61f1154e2fe7012024faa0a5ea2ab3 394 SUPERFAMILY SSF117916 1 88 2.49E-15 T 31-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DY252_07035 fe61f1154e2fe7012024faa0a5ea2ab3 394 Gene3D G3DSA:3.40.50.300 115 365 1.7E-85 T 31-10-2018 DY252_07035 fe61f1154e2fe7012024faa0a5ea2ab3 394 Pfam PF01883 Iron-sulfur cluster assembly protein 6 77 1.6E-15 T 31-10-2018 IPR002744 MIP18 family-like DY252_07035 fe61f1154e2fe7012024faa0a5ea2ab3 394 Hamap MF_02040 Iron-sulfur cluster carrier protein. 118 369 38.681 T 31-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein DY252_07035 fe61f1154e2fe7012024faa0a5ea2ab3 394 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 123 368 2.1E-102 T 31-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DY252_07035 fe61f1154e2fe7012024faa0a5ea2ab3 394 ProSitePatterns PS01215 Mrp family signature. 232 248 - T 31-10-2018 IPR000808 Mrp, conserved site GO:0005524 DY252_01350 e9449a50296d269c2e3002d738a81b8a 172 Pfam PF00583 Acetyltransferase (GNAT) family 51 158 6.4E-12 T 31-10-2018 IPR000182 GNAT domain DY252_01350 e9449a50296d269c2e3002d738a81b8a 172 SUPERFAMILY SSF55729 13 170 3.31E-23 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_01350 e9449a50296d269c2e3002d738a81b8a 172 Gene3D G3DSA:3.40.630.30 14 169 2.5E-31 T 31-10-2018 DY252_09485 b6ee63664f0a17b43b205e406f11d2c5 154 SUPERFAMILY SSF54427 2 154 9.79E-81 T 31-10-2018 IPR032710 NTF2-like domain superfamily DY252_09485 b6ee63664f0a17b43b205e406f11d2c5 154 Gene3D G3DSA:3.10.450.50 10 154 2.4E-78 T 31-10-2018 DY252_09485 b6ee63664f0a17b43b205e406f11d2c5 154 Pfam PF07080 Protein of unknown function (DUF1348) 7 136 6.4E-66 T 31-10-2018 IPR009783 Protein of unknown function DUF1348 DY252_15160 9edb75e7f1aee55340dd5b76875aca73 350 SUPERFAMILY SSF52540 135 322 5.43E-29 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_15160 9edb75e7f1aee55340dd5b76875aca73 350 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 103 329 2.1E-108 T 31-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 DY252_15160 9edb75e7f1aee55340dd5b76875aca73 350 Gene3D G3DSA:3.40.50.300 76 350 1.1E-92 T 31-10-2018 DY252_15160 9edb75e7f1aee55340dd5b76875aca73 350 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 105 328 8.3E-98 T 31-10-2018 IPR022488 Polyphosphate kinase-2-related DY252_15160 9edb75e7f1aee55340dd5b76875aca73 350 PIRSF PIRSF028756 76 350 8.6E-113 T 31-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 DY252_03260 f7240eb2f448ed566aac17c01cc25cc5 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 5.0E-40 T 31-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_03260 f7240eb2f448ed566aac17c01cc25cc5 100 Gene3D G3DSA:3.30.280.10 1 100 7.3E-47 T 31-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_03260 f7240eb2f448ed566aac17c01cc25cc5 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.146 T 31-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_03260 f7240eb2f448ed566aac17c01cc25cc5 100 PIRSF PIRSF001223 1 100 8.3E-51 T 31-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_03260 f7240eb2f448ed566aac17c01cc25cc5 100 SUPERFAMILY SSF54111 1 100 1.83E-45 T 31-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_03260 f7240eb2f448ed566aac17c01cc25cc5 100 Pfam PF00547 Urease, gamma subunit 1 99 1.7E-46 T 31-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_03260 f7240eb2f448ed566aac17c01cc25cc5 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 2.9E-48 T 31-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 DY252_18285 f9005d744c36a68680d204a15d5310ad 341 Gene3D G3DSA:3.40.50.1980 155 341 6.3E-51 T 31-10-2018 DY252_18285 f9005d744c36a68680d204a15d5310ad 341 SUPERFAMILY SSF53807 47 334 1.26E-40 T 31-10-2018 DY252_18285 f9005d744c36a68680d204a15d5310ad 341 Pfam PF01497 Periplasmic binding protein 50 315 2.9E-42 T 31-10-2018 IPR002491 ABC transporter periplasmic binding domain DY252_18285 f9005d744c36a68680d204a15d5310ad 341 Gene3D G3DSA:3.40.50.1980 26 147 1.2E-25 T 31-10-2018 DY252_02395 efdea921859af226d243376af45b8ec4 221 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 35 49 - T 31-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DY252_02395 efdea921859af226d243376af45b8ec4 221 PIRSF PIRSF001461 2 221 6.3E-93 T 31-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DY252_02395 efdea921859af226d243376af45b8ec4 221 SUPERFAMILY SSF51366 4 219 7.65E-77 T 31-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DY252_02395 efdea921859af226d243376af45b8ec4 221 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 7 219 2.9E-90 T 31-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DY252_02395 efdea921859af226d243376af45b8ec4 221 Gene3D G3DSA:3.20.20.70 1 219 7.1E-84 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_02395 efdea921859af226d243376af45b8ec4 221 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 204 1.8E-85 T 31-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DY252_02395 efdea921859af226d243376af45b8ec4 221 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 137 159 - T 31-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DY252_00190 d6f8382198cbd244e3f0f66452b36b65 256 SUPERFAMILY SSF53639 11 222 1.06E-57 T 31-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DY252_00190 d6f8382198cbd244e3f0f66452b36b65 256 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 16 199 1.5E-44 T 31-10-2018 IPR001303 Class II aldolase/adducin N-terminal DY252_00190 d6f8382198cbd244e3f0f66452b36b65 256 Gene3D G3DSA:3.40.225.10 3 255 6.4E-72 T 31-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DY252_00190 d6f8382198cbd244e3f0f66452b36b65 256 SMART SM01007 15 199 3.0E-57 T 31-10-2018 IPR001303 Class II aldolase/adducin N-terminal DY252_17890 3c49a38a595e6e9fcab9c7f67b5b3a3d 443 SUPERFAMILY SSF103473 8 385 2.49E-43 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_17890 3c49a38a595e6e9fcab9c7f67b5b3a3d 443 Gene3D G3DSA:1.20.1250.20 200 441 1.2E-20 T 31-10-2018 DY252_17890 3c49a38a595e6e9fcab9c7f67b5b3a3d 443 Gene3D G3DSA:1.20.1250.20 2 187 1.4E-11 T 31-10-2018 DY252_17890 3c49a38a595e6e9fcab9c7f67b5b3a3d 443 Pfam PF07690 Major Facilitator Superfamily 11 177 1.2E-8 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_17890 3c49a38a595e6e9fcab9c7f67b5b3a3d 443 Pfam PF07690 Major Facilitator Superfamily 207 385 1.7E-20 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_07485 60de01d1a8921cf2c7df7d03fed98696 112 Gene3D G3DSA:3.30.920.10 1 112 2.8E-30 T 31-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DY252_07485 60de01d1a8921cf2c7df7d03fed98696 112 Pfam PF01491 Frataxin-like domain 6 108 1.6E-29 T 31-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DY252_07485 60de01d1a8921cf2c7df7d03fed98696 112 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 7 110 7.7E-26 T 31-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DY252_07485 60de01d1a8921cf2c7df7d03fed98696 112 SMART SM01219 5 112 1.6E-37 T 31-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DY252_07485 60de01d1a8921cf2c7df7d03fed98696 112 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 5 111 19.495 T 31-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DY252_07485 60de01d1a8921cf2c7df7d03fed98696 112 SUPERFAMILY SSF55387 4 106 1.67E-30 T 31-10-2018 DY252_07485 60de01d1a8921cf2c7df7d03fed98696 112 ProSitePatterns PS01344 Frataxin family signature. 53 67 - T 31-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DY252_15745 41fbccd323bd8dca258078fbd92890ba 150 Pfam PF00583 Acetyltransferase (GNAT) family 32 131 3.0E-16 T 31-10-2018 IPR000182 GNAT domain DY252_15745 41fbccd323bd8dca258078fbd92890ba 150 SUPERFAMILY SSF55729 11 136 1.5E-29 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_15745 41fbccd323bd8dca258078fbd92890ba 150 Gene3D G3DSA:3.40.630.30 10 145 9.2E-35 T 31-10-2018 DY252_15865 fd969e2f0f3e847d671b601d51a75e48 217 Pfam PF01081 KDPG and KHG aldolase 19 189 2.4E-28 T 31-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DY252_15865 fd969e2f0f3e847d671b601d51a75e48 217 SUPERFAMILY SSF51569 18 209 2.75E-55 T 31-10-2018 DY252_15865 fd969e2f0f3e847d671b601d51a75e48 217 Gene3D G3DSA:3.20.20.70 16 215 4.9E-61 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_02065 7fdb7143703b22ee9432d6dcb9045ffc 357 SUPERFAMILY SSF56235 46 168 2.45E-5 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_21950 1c1da35607fd300a998a75be9477d9dd 172 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 163 3.2E-59 T 31-10-2018 IPR023635 Peptide deformylase DY252_21950 1c1da35607fd300a998a75be9477d9dd 172 PIRSF PIRSF004749 1 172 1.1E-59 T 31-10-2018 IPR023635 Peptide deformylase DY252_21950 1c1da35607fd300a998a75be9477d9dd 172 Pfam PF01327 Polypeptide deformylase 4 155 6.6E-56 T 31-10-2018 IPR023635 Peptide deformylase DY252_21950 1c1da35607fd300a998a75be9477d9dd 172 Hamap MF_00163 Peptide deformylase [def]. 2 165 33.164 T 31-10-2018 IPR023635 Peptide deformylase DY252_21950 1c1da35607fd300a998a75be9477d9dd 172 SUPERFAMILY SSF56420 2 167 1.57E-66 T 31-10-2018 IPR036821 Peptide deformylase superfamily DY252_21950 1c1da35607fd300a998a75be9477d9dd 172 Gene3D G3DSA:3.90.45.10 1 170 1.1E-65 T 31-10-2018 IPR036821 Peptide deformylase superfamily DY252_21950 1c1da35607fd300a998a75be9477d9dd 172 PRINTS PR01576 Peptide deformylase signature 33 62 6.1E-37 T 31-10-2018 IPR023635 Peptide deformylase DY252_21950 1c1da35607fd300a998a75be9477d9dd 172 PRINTS PR01576 Peptide deformylase signature 104 122 6.1E-37 T 31-10-2018 IPR023635 Peptide deformylase DY252_21950 1c1da35607fd300a998a75be9477d9dd 172 PRINTS PR01576 Peptide deformylase signature 92 103 6.1E-37 T 31-10-2018 IPR023635 Peptide deformylase DY252_21950 1c1da35607fd300a998a75be9477d9dd 172 PRINTS PR01576 Peptide deformylase signature 123 152 6.1E-37 T 31-10-2018 IPR023635 Peptide deformylase DY252_21535 a1190713db1062e59873f2b69f69329d 493 Gene3D G3DSA:3.30.565.10 355 493 7.3E-25 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_21535 a1190713db1062e59873f2b69f69329d 493 SUPERFAMILY SSF47384 241 313 8.04E-7 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_21535 a1190713db1062e59873f2b69f69329d 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 471 4.4E-13 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_21535 a1190713db1062e59873f2b69f69329d 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 490 4.4E-13 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_21535 a1190713db1062e59873f2b69f69329d 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 437 4.4E-13 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_21535 a1190713db1062e59873f2b69f69329d 493 SMART SM00388 253 317 0.0021 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_21535 a1190713db1062e59873f2b69f69329d 493 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 378 492 2.1E-15 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_21535 a1190713db1062e59873f2b69f69329d 493 SUPERFAMILY SSF55874 360 491 1.96E-23 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_21535 a1190713db1062e59873f2b69f69329d 493 SMART SM00387 376 493 5.1E-24 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_21535 a1190713db1062e59873f2b69f69329d 493 Gene3D G3DSA:1.10.287.130 189 313 2.7E-8 T 31-10-2018 DY252_06195 7cc4a2fe715f5791c987ca6dd6116dbc 678 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 341 4.7E-53 T 31-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DY252_06195 7cc4a2fe715f5791c987ca6dd6116dbc 678 Gene3D G3DSA:3.40.50.720 387 671 1.2E-58 T 31-10-2018 DY252_06195 7cc4a2fe715f5791c987ca6dd6116dbc 678 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 386 483 5.5E-8 T 31-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DY252_06195 7cc4a2fe715f5791c987ca6dd6116dbc 678 SUPERFAMILY SSF51395 1 371 1.81E-93 T 31-10-2018 DY252_06195 7cc4a2fe715f5791c987ca6dd6116dbc 678 Gene3D G3DSA:3.20.20.70 1 380 2.5E-96 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_06195 7cc4a2fe715f5791c987ca6dd6116dbc 678 SUPERFAMILY SSF51905 363 674 2.91E-30 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_06195 7cc4a2fe715f5791c987ca6dd6116dbc 678 PRINTS PR00419 Adrenodoxin reductase family signature 410 423 2.0E-6 T 31-10-2018 DY252_06195 7cc4a2fe715f5791c987ca6dd6116dbc 678 PRINTS PR00419 Adrenodoxin reductase family signature 387 409 2.0E-6 T 31-10-2018 DY252_06195 7cc4a2fe715f5791c987ca6dd6116dbc 678 Gene3D G3DSA:3.50.50.60 482 608 1.2E-58 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_20025 44a83503ee45a86dbca8f6e49454d854 290 Gene3D G3DSA:1.10.3720.10 49 288 8.5E-52 T 31-10-2018 IPR035906 MetI-like superfamily DY252_20025 44a83503ee45a86dbca8f6e49454d854 290 SUPERFAMILY SSF161098 55 278 1.57E-47 T 31-10-2018 IPR035906 MetI-like superfamily DY252_20025 44a83503ee45a86dbca8f6e49454d854 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 288 9.5E-11 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_19745 efb7adbbce0ff2ae94430c0b1539e8dc 624 SMART SM00382 396 588 6.4E-16 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_19745 efb7adbbce0ff2ae94430c0b1539e8dc 624 Gene3D G3DSA:1.20.1560.10 21 359 1.3E-127 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_19745 efb7adbbce0ff2ae94430c0b1539e8dc 624 SUPERFAMILY SSF52540 368 606 4.41E-90 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_19745 efb7adbbce0ff2ae94430c0b1539e8dc 624 ProSitePatterns PS00211 ABC transporters family signature. 508 522 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_19745 efb7adbbce0ff2ae94430c0b1539e8dc 624 SUPERFAMILY SSF90123 18 354 1.44E-62 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_19745 efb7adbbce0ff2ae94430c0b1539e8dc 624 Pfam PF00664 ABC transporter transmembrane region 35 325 1.9E-39 T 31-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DY252_19745 efb7adbbce0ff2ae94430c0b1539e8dc 624 Gene3D G3DSA:3.40.50.300 362 619 1.5E-95 T 31-10-2018 DY252_19745 efb7adbbce0ff2ae94430c0b1539e8dc 624 Pfam PF00005 ABC transporter 387 536 2.1E-34 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_04235 39ce7c2085f0da329a93cfed62cf10c9 149 Hamap MF_00042 Ribonuclease H [rnhA]. 8 149 35.285 T 31-10-2018 IPR022892 Ribonuclease HI GO:0004523 DY252_04235 39ce7c2085f0da329a93cfed62cf10c9 149 SUPERFAMILY SSF53098 9 147 4.55E-60 T 31-10-2018 IPR012337 Ribonuclease H-like superfamily DY252_04235 39ce7c2085f0da329a93cfed62cf10c9 149 Gene3D G3DSA:3.30.420.10 4 149 1.0E-60 T 31-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DY252_04235 39ce7c2085f0da329a93cfed62cf10c9 149 Pfam PF00075 RNase H 9 147 3.6E-52 T 31-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 DY252_02135 67738992597f81e9544c1e09f7d9df63 303 Pfam PF03466 LysR substrate binding domain 88 293 1.4E-43 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_02135 67738992597f81e9544c1e09f7d9df63 303 SUPERFAMILY SSF46785 4 88 1.05E-20 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_02135 67738992597f81e9544c1e09f7d9df63 303 SUPERFAMILY SSF53850 89 297 1.72E-45 T 31-10-2018 DY252_02135 67738992597f81e9544c1e09f7d9df63 303 Gene3D G3DSA:3.40.190.290 91 292 6.5E-61 T 31-10-2018 DY252_02135 67738992597f81e9544c1e09f7d9df63 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.8E-17 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_02135 67738992597f81e9544c1e09f7d9df63 303 Gene3D G3DSA:1.10.10.10 3 89 7.0E-27 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_13950 16a7b13268bfb5cca7519005ff12cbb7 195 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 48 76 - T 31-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 DY252_13950 16a7b13268bfb5cca7519005ff12cbb7 195 SUPERFAMILY SSF49482 3 195 1.01E-48 T 31-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 DY252_13950 16a7b13268bfb5cca7519005ff12cbb7 195 Pfam PF00775 Dioxygenase 30 112 1.7E-14 T 31-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 DY252_13950 16a7b13268bfb5cca7519005ff12cbb7 195 Gene3D G3DSA:2.60.130.10 2 195 4.6E-64 T 31-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 DY252_13950 16a7b13268bfb5cca7519005ff12cbb7 195 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 6 195 5.1E-71 T 31-10-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 SUPERFAMILY SSF53732 7 627 4.97E-227 T 31-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 31-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 Pfam PF00694 Aconitase C-terminal domain 692 819 1.5E-46 T 31-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 21 892 0.0 T 31-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 SUPERFAMILY SSF52016 631 892 1.06E-86 T 31-10-2018 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 Gene3D G3DSA:1.10.1440.20 591 651 3.4E-18 T 31-10-2018 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 Gene3D G3DSA:3.20.19.10 655 893 1.5E-104 T 31-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 Gene3D G3DSA:3.30.499.20 8 375 2.8E-162 T 31-10-2018 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 PRINTS PR00415 Aconitase family signature 375 389 1.5E-41 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 PRINTS PR00415 Aconitase family signature 282 295 1.5E-41 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 PRINTS PR00415 Aconitase family signature 220 235 1.5E-41 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 PRINTS PR00415 Aconitase family signature 206 219 1.5E-41 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 PRINTS PR00415 Aconitase family signature 172 180 1.5E-41 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 PRINTS PR00415 Aconitase family signature 431 442 1.5E-41 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 PRINTS PR00415 Aconitase family signature 296 309 1.5E-41 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 PRINTS PR00415 Aconitase family signature 148 161 1.5E-41 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 PRINTS PR00415 Aconitase family signature 493 506 1.5E-41 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 Pfam PF00330 Aconitase family (aconitate hydratase) 74 562 6.8E-184 T 31-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 31-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DY252_04505 f659cb23e3c2c655bcbb422f4bacdad8 895 Gene3D G3DSA:3.30.499.10 376 590 1.0E-95 T 31-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 DY252_05670 631f732cb2518bce59567d2b50a975bf 225 Pfam PF14301 Domain of unknown function (DUF4376) 105 202 7.7E-10 T 31-10-2018 IPR025484 Domain of unknown function DUF4376 DY252_02030 b681f77bb5e304a2a911c7907731ace5 405 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 12 401 52.732 T 31-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DY252_02030 b681f77bb5e304a2a911c7907731ace5 405 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 17 400 2.8E-195 T 31-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DY252_02030 b681f77bb5e304a2a911c7907731ace5 405 SUPERFAMILY SSF53686 13 399 2.49E-150 T 31-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DY252_02030 b681f77bb5e304a2a911c7907731ace5 405 PIRSF PIRSF001413 1 405 2.3E-164 T 31-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DY252_02030 b681f77bb5e304a2a911c7907731ace5 405 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 64 388 2.0E-45 T 31-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DY252_02030 b681f77bb5e304a2a911c7907731ace5 405 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 91 105 - T 31-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DY252_02030 b681f77bb5e304a2a911c7907731ace5 405 Gene3D G3DSA:3.40.50.1100 20 216 4.5E-189 T 31-10-2018 DY252_02030 b681f77bb5e304a2a911c7907731ace5 405 Gene3D G3DSA:3.40.50.1100 64 394 4.5E-189 T 31-10-2018 DY252_00020 40ac4bc978134e81a2a2108bed7fc539 170 Pfam PF14487 Domain of unknown function (DUF4433) 14 168 9.7E-15 T 31-10-2018 IPR029494 Domain of unknown function DUF4433 DY252_22155 40ac4bc978134e81a2a2108bed7fc539 170 Pfam PF14487 Domain of unknown function (DUF4433) 14 168 9.7E-15 T 31-10-2018 IPR029494 Domain of unknown function DUF4433 DY252_11985 1be119de7ece2bdeeb9cce8883e4fb8b 180 SUPERFAMILY SSF48452 2 176 1.1E-65 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_11985 1be119de7ece2bdeeb9cce8883e4fb8b 180 Pfam PF06041 Bacterial protein of unknown function (DUF924) 6 177 2.6E-61 T 31-10-2018 IPR010323 Protein of unknown function DUF924 DY252_11985 1be119de7ece2bdeeb9cce8883e4fb8b 180 Gene3D G3DSA:1.25.40.10 79 180 5.9E-31 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_11985 1be119de7ece2bdeeb9cce8883e4fb8b 180 Gene3D G3DSA:1.20.58.320 1 78 1.0E-26 T 31-10-2018 DY252_13595 fa224ee3e941e0e03ff284a74525350d 158 SUPERFAMILY SSF47240 1 153 6.04E-45 T 31-10-2018 IPR009078 Ferritin-like superfamily DY252_13595 fa224ee3e941e0e03ff284a74525350d 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 153 3.1E-66 T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13595 fa224ee3e941e0e03ff284a74525350d 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13595 fa224ee3e941e0e03ff284a74525350d 158 PRINTS PR00601 Bacterioferritin signature 44 64 3.2E-58 T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13595 fa224ee3e941e0e03ff284a74525350d 158 PRINTS PR00601 Bacterioferritin signature 23 43 3.2E-58 T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13595 fa224ee3e941e0e03ff284a74525350d 158 PRINTS PR00601 Bacterioferritin signature 128 149 3.2E-58 T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13595 fa224ee3e941e0e03ff284a74525350d 158 PRINTS PR00601 Bacterioferritin signature 65 85 3.2E-58 T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13595 fa224ee3e941e0e03ff284a74525350d 158 PRINTS PR00601 Bacterioferritin signature 86 106 3.2E-58 T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13595 fa224ee3e941e0e03ff284a74525350d 158 PRINTS PR00601 Bacterioferritin signature 107 127 3.2E-58 T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13595 fa224ee3e941e0e03ff284a74525350d 158 PRINTS PR00601 Bacterioferritin signature 3 22 3.2E-58 T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13595 fa224ee3e941e0e03ff284a74525350d 158 Pfam PF00210 Ferritin-like domain 9 142 4.4E-33 T 31-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DY252_13595 fa224ee3e941e0e03ff284a74525350d 158 PIRSF PIRSF002560 1 156 1.9E-63 T 31-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DY252_13595 fa224ee3e941e0e03ff284a74525350d 158 Gene3D G3DSA:1.20.1260.10 1 157 4.3E-58 T 31-10-2018 IPR012347 Ferritin-like DY252_21770 ffb2c22d4e5109c81373bb042bea6e13 282 SUPERFAMILY SSF51735 104 275 5.33E-32 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_21770 ffb2c22d4e5109c81373bb042bea6e13 282 Gene3D G3DSA:3.40.50.720 102 242 1.4E-62 T 31-10-2018 DY252_21770 ffb2c22d4e5109c81373bb042bea6e13 282 SUPERFAMILY SSF53223 2 103 3.57E-17 T 31-10-2018 DY252_21770 ffb2c22d4e5109c81373bb042bea6e13 282 Gene3D G3DSA:3.40.50.10860 6 263 1.4E-62 T 31-10-2018 DY252_21770 ffb2c22d4e5109c81373bb042bea6e13 282 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 91 2.1E-11 T 31-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DY252_19475 a43e3a55cd74eda0da340ee9f4699d86 279 SUPERFAMILY SSF52374 3 273 2.95E-76 T 31-10-2018 DY252_19475 a43e3a55cd74eda0da340ee9f4699d86 279 Gene3D G3DSA:3.40.50.620 1 278 1.9E-80 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_19475 a43e3a55cd74eda0da340ee9f4699d86 279 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 267 1.7E-43 T 31-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DY252_19475 a43e3a55cd74eda0da340ee9f4699d86 279 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 1.5E-12 T 31-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DY252_19475 a43e3a55cd74eda0da340ee9f4699d86 279 PRINTS PR00987 Glutamyl-tRNA synthetase signature 191 201 1.5E-12 T 31-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DY252_19475 a43e3a55cd74eda0da340ee9f4699d86 279 PRINTS PR00987 Glutamyl-tRNA synthetase signature 207 215 1.5E-12 T 31-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DY252_19475 a43e3a55cd74eda0da340ee9f4699d86 279 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.5E-12 T 31-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DY252_19475 a43e3a55cd74eda0da340ee9f4699d86 279 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 31-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_13940 9e872e74ce32c636ddc311a7bc4355f3 257 SUPERFAMILY SSF100950 2 246 1.6E-73 T 31-10-2018 IPR037171 NagB/RpiA transferase-like DY252_13940 9e872e74ce32c636ddc311a7bc4355f3 257 SMART SM00882 8 217 1.8E-37 T 31-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DY252_13940 9e872e74ce32c636ddc311a7bc4355f3 257 Pfam PF01144 Coenzyme A transferase 7 217 2.0E-46 T 31-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DY252_13940 9e872e74ce32c636ddc311a7bc4355f3 257 Gene3D G3DSA:3.40.1080.10 1 249 7.8E-83 T 31-10-2018 DY252_02750 73b69cddc979772bd76ddd2d0a7c7820 372 PIRSF PIRSF018953 5 372 1.4E-47 T 31-10-2018 IPR016741 Uncharacterised conserved protein UCP018953 DY252_02750 73b69cddc979772bd76ddd2d0a7c7820 372 SMART SM01204 220 359 6.3E-34 T 31-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DY252_02750 73b69cddc979772bd76ddd2d0a7c7820 372 SMART SM00897 34 219 3.0E-21 T 31-10-2018 IPR013702 FIST domain, N-terminal DY252_02750 73b69cddc979772bd76ddd2d0a7c7820 372 Pfam PF08495 FIST N domain 36 218 1.6E-21 T 31-10-2018 IPR013702 FIST domain, N-terminal DY252_02750 73b69cddc979772bd76ddd2d0a7c7820 372 Pfam PF10442 FIST C domain 220 357 2.1E-27 T 31-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DY252_18385 77631dcaf2a5946dbe558d4976f6936c 459 Gene3D G3DSA:3.40.50.10330 23 131 6.1E-19 T 31-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DY252_18385 77631dcaf2a5946dbe558d4976f6936c 459 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 34 299 7.9E-38 T 31-10-2018 IPR005218 Diacylglycerol/lipid kinase DY252_18385 77631dcaf2a5946dbe558d4976f6936c 459 Gene3D G3DSA:2.60.200.40 132 291 2.1E-29 T 31-10-2018 DY252_18385 77631dcaf2a5946dbe558d4976f6936c 459 Pfam PF00781 Diacylglycerol kinase catalytic domain 29 131 5.5E-17 T 31-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DY252_18385 77631dcaf2a5946dbe558d4976f6936c 459 SUPERFAMILY SSF111331 30 301 1.26E-54 T 31-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DY252_09355 84fb9bfb185c9058a1739a9bbc299b12 158 Gene3D G3DSA:3.30.530.20 6 157 1.7E-43 T 31-10-2018 IPR023393 START-like domain superfamily DY252_09355 84fb9bfb185c9058a1739a9bbc299b12 158 SUPERFAMILY SSF55961 3 155 3.87E-38 T 31-10-2018 DY252_09355 84fb9bfb185c9058a1739a9bbc299b12 158 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 23 153 2.8E-28 T 31-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like DY252_17460 e5661f0468e7811cd62ad088d9df5f08 133 Pfam PF00460 Flagella basal body rod protein 21 39 4.0E-6 T 31-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DY252_17460 e5661f0468e7811cd62ad088d9df5f08 133 PIRSF PIRSF002889 1 132 5.1E-20 T 31-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 DY252_17460 e5661f0468e7811cd62ad088d9df5f08 133 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 9 129 9.2E-17 T 31-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 DY252_09115 1a829d4b6b4776be9d5c7934a98ed7e9 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 196 30.193 T 31-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 DY252_09115 1a829d4b6b4776be9d5c7934a98ed7e9 201 Pfam PF02525 Flavodoxin-like fold 2 193 2.4E-41 T 31-10-2018 IPR003680 Flavodoxin-like fold DY252_09115 1a829d4b6b4776be9d5c7934a98ed7e9 201 SUPERFAMILY SSF52218 1 195 5.12E-51 T 31-10-2018 IPR029039 Flavoprotein-like superfamily DY252_09115 1a829d4b6b4776be9d5c7934a98ed7e9 201 Gene3D G3DSA:3.40.50.360 1 196 4.2E-56 T 31-10-2018 IPR029039 Flavoprotein-like superfamily DY252_07805 3b6becc5a8c76c47d98aa45f606a398e 764 Gene3D G3DSA:3.30.9.20 40 254 2.0E-128 T 31-10-2018 DY252_07805 3b6becc5a8c76c47d98aa45f606a398e 764 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 396 725 4.9E-68 T 31-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DY252_07805 3b6becc5a8c76c47d98aa45f606a398e 764 Pfam PF01494 FAD binding domain 2 302 4.1E-6 T 31-10-2018 IPR002938 FAD-binding domain GO:0071949 DY252_07805 3b6becc5a8c76c47d98aa45f606a398e 764 SUPERFAMILY SSF51395 394 749 5.24E-115 T 31-10-2018 DY252_07805 3b6becc5a8c76c47d98aa45f606a398e 764 Gene3D G3DSA:3.50.50.60 3 337 2.0E-128 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_07805 3b6becc5a8c76c47d98aa45f606a398e 764 SUPERFAMILY SSF51905 2 342 2.22E-39 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_07805 3b6becc5a8c76c47d98aa45f606a398e 764 Gene3D G3DSA:3.20.20.70 394 746 1.2E-115 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_14095 8d2e0bd6711e70defe49dcfeac3c953a 410 Gene3D G3DSA:3.90.550.10 100 327 4.8E-38 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_14095 8d2e0bd6711e70defe49dcfeac3c953a 410 SUPERFAMILY SSF53448 38 403 1.44E-71 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_01260 b7edf5a28b0569a619ed4f2bbb1009d7 186 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 9 180 40.036 T 31-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DY252_01260 b7edf5a28b0569a619ed4f2bbb1009d7 186 SUPERFAMILY SSF56235 7 180 2.44E-56 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_01260 b7edf5a28b0569a619ed4f2bbb1009d7 186 Pfam PF00227 Proteasome subunit 8 177 1.5E-21 T 31-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 DY252_01260 b7edf5a28b0569a619ed4f2bbb1009d7 186 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 10 180 1.2E-80 T 31-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DY252_01260 b7edf5a28b0569a619ed4f2bbb1009d7 186 PIRSF PIRSF039093 3 183 1.0E-81 T 31-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DY252_01260 b7edf5a28b0569a619ed4f2bbb1009d7 186 Gene3D G3DSA:3.60.20.10 5 181 3.4E-68 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_13880 58fbe6f6d39dc2037dee6076250ddf88 294 Pfam PF01380 SIS domain 131 259 6.7E-16 T 31-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DY252_13880 58fbe6f6d39dc2037dee6076250ddf88 294 SUPERFAMILY SSF53697 104 279 8.9E-36 T 31-10-2018 DY252_13880 58fbe6f6d39dc2037dee6076250ddf88 294 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 79 3.0E-20 T 31-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DY252_13880 58fbe6f6d39dc2037dee6076250ddf88 294 Gene3D G3DSA:1.10.10.10 1 80 2.4E-24 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_13880 58fbe6f6d39dc2037dee6076250ddf88 294 SUPERFAMILY SSF46689 5 78 1.61E-19 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_13880 58fbe6f6d39dc2037dee6076250ddf88 294 Gene3D G3DSA:3.40.50.10490 100 281 1.7E-40 T 31-10-2018 DY252_16830 641c104eb2f0d1e127ccc1b16f85e970 137 Gene3D G3DSA:1.10.3680.10 3 118 4.5E-13 T 31-10-2018 IPR029024 TerB-like DY252_16830 641c104eb2f0d1e127ccc1b16f85e970 137 SUPERFAMILY SSF158682 5 118 3.4E-14 T 31-10-2018 IPR029024 TerB-like DY252_16830 641c104eb2f0d1e127ccc1b16f85e970 137 Pfam PF05099 Tellurite resistance protein TerB 5 116 2.5E-8 T 31-10-2018 IPR007791 Co-chaperone DjlA, N-terminal DY252_20065 a14a936c9f012280aa50e0cc2706cd04 94 SUPERFAMILY SSF69786 1 82 1.24E-23 T 31-10-2018 IPR036591 YggU-like superfamily DY252_20065 a14a936c9f012280aa50e0cc2706cd04 94 Hamap MF_00634 UPF0235 protein YggU [yggU]. 1 87 16.216 T 31-10-2018 IPR003746 Protein of unknown function DUF167 DY252_20065 a14a936c9f012280aa50e0cc2706cd04 94 Gene3D G3DSA:3.30.1200.10 1 93 2.9E-27 T 31-10-2018 IPR036591 YggU-like superfamily DY252_20065 a14a936c9f012280aa50e0cc2706cd04 94 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 1 74 1.6E-26 T 31-10-2018 IPR003746 Protein of unknown function DUF167 DY252_20065 a14a936c9f012280aa50e0cc2706cd04 94 SMART SM01152 1 76 9.9E-30 T 31-10-2018 IPR003746 Protein of unknown function DUF167 DY252_04490 f4ad2a9a37d1ca1fb86a8b9cca603bac 254 SUPERFAMILY SSF52833 35 250 9.29E-57 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_04490 f4ad2a9a37d1ca1fb86a8b9cca603bac 254 Pfam PF06764 Protein of unknown function (DUF1223) 37 237 1.4E-57 T 31-10-2018 IPR010634 Protein of unknown function DUF1223 DY252_05610 d983cd9a3fde4f238426b8da611552de 102 Gene3D G3DSA:3.30.2310.20 19 102 1.0E-20 T 31-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DY252_05610 d983cd9a3fde4f238426b8da611552de 102 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 25 99 4.2E-8 T 31-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DY252_05610 d983cd9a3fde4f238426b8da611552de 102 SUPERFAMILY SSF143011 18 98 5.89E-18 T 31-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DY252_18320 700cde7a0beade5aef054941eb89ce01 240 Gene3D G3DSA:3.40.50.880 2 240 8.6E-70 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_18320 700cde7a0beade5aef054941eb89ce01 240 Pfam PF07722 Peptidase C26 6 220 2.1E-57 T 31-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 DY252_18320 700cde7a0beade5aef054941eb89ce01 240 SUPERFAMILY SSF52317 4 236 3.36E-38 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_06785 7772d637b68c9aececb23a09956d9c8f 345 Gene3D G3DSA:1.10.600.10 18 344 3.2E-105 T 31-10-2018 IPR008949 Isoprenoid synthase domain superfamily DY252_06785 7772d637b68c9aececb23a09956d9c8f 345 Pfam PF00348 Polyprenyl synthetase 52 293 3.0E-70 T 31-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 DY252_06785 7772d637b68c9aececb23a09956d9c8f 345 SUPERFAMILY SSF48576 22 344 1.66E-93 T 31-10-2018 IPR008949 Isoprenoid synthase domain superfamily DY252_06785 7772d637b68c9aececb23a09956d9c8f 345 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 224 236 - T 31-10-2018 IPR033749 Polyprenyl synthetase, conserved site DY252_06785 7772d637b68c9aececb23a09956d9c8f 345 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 102 116 - T 31-10-2018 IPR033749 Polyprenyl synthetase, conserved site DY252_07675 2edcb971bc83e59e9c66e981062f75fe 182 Pfam PF10502 Signal peptidase, peptidase S26 45 180 4.9E-46 T 31-10-2018 IPR019533 Peptidase S26 DY252_07675 2edcb971bc83e59e9c66e981062f75fe 182 Gene3D G3DSA:2.10.109.10 56 180 1.6E-12 T 31-10-2018 DY252_07675 2edcb971bc83e59e9c66e981062f75fe 182 SUPERFAMILY SSF51306 47 180 3.61E-25 T 31-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DY252_07675 2edcb971bc83e59e9c66e981062f75fe 182 TIGRFAM TIGR02771 TraF_Ti: conjugative transfer signal peptidase TraF 23 179 2.9E-30 T 31-10-2018 IPR014139 Peptidase S26C, conjugative transfer signal peptidase TraF GO:0000746|GO:0042597 DY252_19270 175bf4b816edb873cfd1204046f196bb 378 Pfam PF01548 Transposase 10 156 2.0E-16 T 31-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DY252_19270 175bf4b816edb873cfd1204046f196bb 378 Pfam PF02371 Transposase IS116/IS110/IS902 family 230 301 8.4E-21 T 31-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DY252_12655 4f2fb628c0201238e3e98c856d08bba9 286 PIRSF PIRSF038455 2 286 5.2E-87 T 31-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 DY252_12655 4f2fb628c0201238e3e98c856d08bba9 286 Gene3D G3DSA:1.10.760.10 52 285 2.1E-100 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_12655 4f2fb628c0201238e3e98c856d08bba9 286 Gene3D G3DSA:1.10.760.10 79 168 2.1E-100 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_12655 4f2fb628c0201238e3e98c856d08bba9 286 SUPERFAMILY SSF46626 28 173 2.02E-38 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_12655 4f2fb628c0201238e3e98c856d08bba9 286 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 77 286 1.8E-75 T 31-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 DY252_12655 4f2fb628c0201238e3e98c856d08bba9 286 SUPERFAMILY SSF46626 178 285 2.07E-34 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_15235 10a08e377b5e29c280a184f2049cdfe0 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.441 T 31-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DY252_15235 10a08e377b5e29c280a184f2049cdfe0 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 31-10-2018 IPR006162 Phosphopantetheine attachment site DY252_15235 10a08e377b5e29c280a184f2049cdfe0 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.4E-13 T 31-10-2018 IPR009081 Phosphopantetheine binding ACP domain DY252_15235 10a08e377b5e29c280a184f2049cdfe0 78 Gene3D G3DSA:1.10.1200.10 1 78 7.6E-29 T 31-10-2018 IPR036736 ACP-like superfamily DY252_15235 10a08e377b5e29c280a184f2049cdfe0 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 8.3E-33 T 31-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DY252_15235 10a08e377b5e29c280a184f2049cdfe0 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 74 1.0E-11 T 31-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DY252_15235 10a08e377b5e29c280a184f2049cdfe0 78 SUPERFAMILY SSF47336 2 75 6.15E-23 T 31-10-2018 IPR036736 ACP-like superfamily DY252_19720 b2578ffe2b813445787b2afcbdcbf6f2 148 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 33 118 3.3E-15 T 31-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 DY252_19720 b2578ffe2b813445787b2afcbdcbf6f2 148 SUPERFAMILY SSF51316 6 135 1.36E-37 T 31-10-2018 IPR011057 Mss4-like superfamily DY252_19720 b2578ffe2b813445787b2afcbdcbf6f2 148 Gene3D G3DSA:2.170.150.70 11 122 1.1E-17 T 31-10-2018 DY252_03220 cd75db2b37fb77ff207a2bd5054f6f6e 327 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 30 1.8E-4 T 31-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DY252_03220 cd75db2b37fb77ff207a2bd5054f6f6e 327 Pfam PF00753 Metallo-beta-lactamase superfamily 93 297 1.6E-20 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_03220 cd75db2b37fb77ff207a2bd5054f6f6e 327 Gene3D G3DSA:3.60.15.10 33 326 9.9E-95 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_03220 cd75db2b37fb77ff207a2bd5054f6f6e 327 SUPERFAMILY SSF56281 34 322 3.01E-52 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_03220 cd75db2b37fb77ff207a2bd5054f6f6e 327 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 23 2.9E-5 T 31-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DY252_03220 cd75db2b37fb77ff207a2bd5054f6f6e 327 SMART SM00849 94 300 2.9E-19 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_02095 b4d23deb5f6229214ec6e3f3974c832b 322 Gene3D G3DSA:1.10.10.10 214 319 3.2E-8 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_02095 b4d23deb5f6229214ec6e3f3974c832b 322 SUPERFAMILY SSF52172 7 134 1.42E-21 T 31-10-2018 IPR011006 CheY-like superfamily DY252_02095 b4d23deb5f6229214ec6e3f3974c832b 322 SUPERFAMILY SSF46894 248 314 1.02E-9 T 31-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DY252_02095 b4d23deb5f6229214ec6e3f3974c832b 322 Pfam PF00072 Response regulator receiver domain 10 121 4.6E-12 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_02095 b4d23deb5f6229214ec6e3f3974c832b 322 SMART SM00448 7 122 2.5E-10 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_02095 b4d23deb5f6229214ec6e3f3974c832b 322 Gene3D G3DSA:3.40.50.2300 5 137 2.4E-20 T 31-10-2018 DY252_02095 b4d23deb5f6229214ec6e3f3974c832b 322 SMART SM00421 257 314 2.0E-4 T 31-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DY252_07115 b8e55cc7a38259dc59e6fe1114d1d63e 324 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_07115 b8e55cc7a38259dc59e6fe1114d1d63e 324 SUPERFAMILY SSF52540 6 254 2.24E-67 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07115 b8e55cc7a38259dc59e6fe1114d1d63e 324 Pfam PF00005 ABC transporter 26 183 4.0E-27 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_07115 b8e55cc7a38259dc59e6fe1114d1d63e 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 4.4E-25 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_07115 b8e55cc7a38259dc59e6fe1114d1d63e 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 300 2.8E-18 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_07115 b8e55cc7a38259dc59e6fe1114d1d63e 324 Gene3D G3DSA:3.40.50.300 4 324 1.7E-98 T 31-10-2018 DY252_07115 b8e55cc7a38259dc59e6fe1114d1d63e 324 SMART SM00382 35 241 4.6E-14 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_13710 bcb9ca10edce4b318ebfa668d1e4bcdd 460 SUPERFAMILY SSF54368 12 119 3.4E-13 T 31-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_13710 bcb9ca10edce4b318ebfa668d1e4bcdd 460 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 257 272 - T 31-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DY252_13710 bcb9ca10edce4b318ebfa668d1e4bcdd 460 Gene3D G3DSA:3.30.590.10 123 459 1.9E-99 T 31-10-2018 DY252_13710 bcb9ca10edce4b318ebfa668d1e4bcdd 460 Pfam PF00120 Glutamine synthetase, catalytic domain 121 456 8.1E-99 T 31-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_13710 bcb9ca10edce4b318ebfa668d1e4bcdd 460 SMART SM01230 120 377 1.9E-89 T 31-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_13710 bcb9ca10edce4b318ebfa668d1e4bcdd 460 SUPERFAMILY SSF55931 122 458 1.77E-101 T 31-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DY252_05420 907966371be83cea36e97cc14c0481f3 400 Pfam PF00155 Aminotransferase class I and II 32 392 9.1E-81 T 31-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DY252_05420 907966371be83cea36e97cc14c0481f3 400 SUPERFAMILY SSF53383 1 396 3.67E-118 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_05420 907966371be83cea36e97cc14c0481f3 400 Gene3D G3DSA:3.40.640.10 63 286 3.7E-139 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_05420 907966371be83cea36e97cc14c0481f3 400 Gene3D G3DSA:3.90.1150.10 26 392 3.7E-139 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_05420 907966371be83cea36e97cc14c0481f3 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 31-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DY252_13720 84ed9441845e5bf6e8d452e38f342b10 449 Pfam PF01266 FAD dependent oxidoreductase 43 404 1.8E-50 T 31-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DY252_13720 84ed9441845e5bf6e8d452e38f342b10 449 SUPERFAMILY SSF51905 42 418 1.11E-43 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_13720 84ed9441845e5bf6e8d452e38f342b10 449 Gene3D G3DSA:3.30.9.10 137 364 4.0E-72 T 31-10-2018 DY252_13720 84ed9441845e5bf6e8d452e38f342b10 449 Gene3D G3DSA:3.50.50.60 43 404 4.0E-72 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_01150 c0a8705f815e880ef32c754fb064d721 172 Pfam PF00583 Acetyltransferase (GNAT) family 74 145 3.8E-15 T 31-10-2018 IPR000182 GNAT domain DY252_01150 c0a8705f815e880ef32c754fb064d721 172 SUPERFAMILY SSF55729 18 171 2.83E-28 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_01150 c0a8705f815e880ef32c754fb064d721 172 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 71 167 1.1E-25 T 31-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 DY252_01150 c0a8705f815e880ef32c754fb064d721 172 Gene3D G3DSA:3.40.630.30 22 172 7.7E-33 T 31-10-2018 DY252_19165 5151897f5c343c68967d7d97e05132cb 618 SUPERFAMILY SSF56801 28 551 2.09E-77 T 31-10-2018 DY252_19165 5151897f5c343c68967d7d97e05132cb 618 ProSitePatterns PS00455 Putative AMP-binding domain signature. 215 226 - T 31-10-2018 IPR020845 AMP-binding, conserved site DY252_19165 5151897f5c343c68967d7d97e05132cb 618 Pfam PF00501 AMP-binding enzyme 47 455 6.3E-57 T 31-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DY252_19165 5151897f5c343c68967d7d97e05132cb 618 Gene3D G3DSA:3.40.50.12780 28 457 2.5E-61 T 31-10-2018 DY252_04095 e19de75537981f8ff14d7be32c2910f5 324 Pfam PF04773 FecR protein 115 211 7.9E-18 T 31-10-2018 IPR006860 FecR protein DY252_04095 e19de75537981f8ff14d7be32c2910f5 324 PIRSF PIRSF018266 9 324 1.8E-89 T 31-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component DY252_04095 e19de75537981f8ff14d7be32c2910f5 324 Pfam PF16220 Domain of unknown function (DUF4880) 20 61 3.4E-11 T 31-10-2018 IPR032623 FecR, N-terminal DY252_04095 e19de75537981f8ff14d7be32c2910f5 324 Gene3D G3DSA:2.60.120.1440 107 246 8.0E-21 T 31-10-2018 DY252_08975 1b56d1011d34be376155a54f39371c29 206 Gene3D G3DSA:3.40.1370.10 3 206 1.1E-72 T 31-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 DY252_08975 1b56d1011d34be376155a54f39371c29 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 202 1.5E-69 T 31-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_08975 1b56d1011d34be376155a54f39371c29 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 206 30.404 T 31-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_08975 1b56d1011d34be376155a54f39371c29 206 SUPERFAMILY SSF52166 1 205 5.63E-71 T 31-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 DY252_08975 1b56d1011d34be376155a54f39371c29 206 Pfam PF00573 Ribosomal protein L4/L1 family 16 203 1.2E-65 T 31-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 DY252_13255 b5daec369898067022443fa445665cec 265 Gene3D G3DSA:3.20.20.70 1 264 4.4E-104 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_13255 b5daec369898067022443fa445665cec 265 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 260 3.2E-100 T 31-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 DY252_13255 b5daec369898067022443fa445665cec 265 SUPERFAMILY SSF51366 11 262 2.47E-90 T 31-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DY252_13255 b5daec369898067022443fa445665cec 265 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 36.759 T 31-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 DY252_13255 b5daec369898067022443fa445665cec 265 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 31-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 DY252_08200 b23528351a555aee47f759a21113b89b 485 Gene3D G3DSA:3.40.309.10 255 444 1.3E-157 T 31-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DY252_08200 b23528351a555aee47f759a21113b89b 485 Pfam PF00171 Aldehyde dehydrogenase family 16 474 1.7E-150 T 31-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DY252_08200 b23528351a555aee47f759a21113b89b 485 SUPERFAMILY SSF53720 3 480 1.1E-152 T 31-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DY252_08200 b23528351a555aee47f759a21113b89b 485 Gene3D G3DSA:3.40.605.10 8 472 1.3E-157 T 31-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_08200 b23528351a555aee47f759a21113b89b 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 31-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 22 898 23.807 T 31-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 Gene3D G3DSA:3.40.1170.10 16 141 3.1E-48 T 31-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 SUPERFAMILY SSF55271 14 135 1.31E-41 T 31-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 Gene3D G3DSA:3.40.50.300 602 903 7.7E-95 T 31-10-2018 DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 SUPERFAMILY SSF53150 137 302 3.53E-36 T 31-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 Pfam PF05192 MutS domain III 292 593 2.5E-37 T 31-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 Pfam PF05188 MutS domain II 148 273 1.1E-20 T 31-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 Pfam PF00488 MutS domain V 648 835 1.1E-84 T 31-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 Gene3D G3DSA:1.10.1420.10 289 593 2.5E-87 T 31-10-2018 DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 SMART SM00533 306 625 5.9E-80 T 31-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 Gene3D G3DSA:3.30.420.110 147 280 5.9E-28 T 31-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 SUPERFAMILY SSF52540 602 836 8.42E-57 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 726 742 - T 31-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 23 903 7.2E-274 T 31-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 Gene3D G3DSA:1.10.1420.10 410 537 2.5E-87 T 31-10-2018 DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 Pfam PF05190 MutS family domain IV 460 550 8.8E-24 T 31-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 SUPERFAMILY SSF48334 290 599 7.85E-80 T 31-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 Pfam PF01624 MutS domain I 23 139 1.7E-43 T 31-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 PIRSF PIRSF037677 9 866 2.7E-157 T 31-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 DY252_01725 5c8a82c8c3383735435350801bc86dd4 907 SMART SM00534 645 832 1.7E-111 T 31-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DY252_10585 3083c6484b6ae57a4775a0def56e4a5d 184 Pfam PF01292 Prokaryotic cytochrome b561 10 179 9.0E-33 T 31-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 DY252_10585 3083c6484b6ae57a4775a0def56e4a5d 184 SUPERFAMILY SSF81342 5 182 1.73E-36 T 31-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DY252_20010 71510151a14479b59b7d0ea44e2c2383 340 SUPERFAMILY SSF55347 130 320 3.57E-75 T 31-10-2018 DY252_20010 71510151a14479b59b7d0ea44e2c2383 340 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 4 334 1.1E-137 T 31-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DY252_20010 71510151a14479b59b7d0ea44e2c2383 340 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 319 1.1E-56 T 31-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DY252_20010 71510151a14479b59b7d0ea44e2c2383 340 SMART SM00859 4 120 2.6E-41 T 31-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DY252_20010 71510151a14479b59b7d0ea44e2c2383 340 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 333 36.576 T 31-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DY252_20010 71510151a14479b59b7d0ea44e2c2383 340 SUPERFAMILY SSF51735 3 158 3.25E-51 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_20010 71510151a14479b59b7d0ea44e2c2383 340 PIRSF PIRSF000148 2 337 4.8E-132 T 31-10-2018 DY252_20010 71510151a14479b59b7d0ea44e2c2383 340 Gene3D G3DSA:3.30.360.10 129 316 2.6E-141 T 31-10-2018 DY252_20010 71510151a14479b59b7d0ea44e2c2383 340 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 118 3.7E-30 T 31-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DY252_20010 71510151a14479b59b7d0ea44e2c2383 340 Gene3D G3DSA:3.40.50.720 5 330 2.6E-141 T 31-10-2018 DY252_00125 0f7df31ee58d5daf48b9eedddcb28b0e 281 SUPERFAMILY SSF53335 56 277 1.07E-27 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_00125 0f7df31ee58d5daf48b9eedddcb28b0e 281 Gene3D G3DSA:3.40.50.150 42 278 6.8E-29 T 31-10-2018 DY252_00125 0f7df31ee58d5daf48b9eedddcb28b0e 281 Pfam PF08241 Methyltransferase domain 75 191 1.7E-15 T 31-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DY252_04240 022954fab31dfe9fd0d199cfe5f62772 322 Hamap MF_00301 Homoserine kinase [thrB]. 1 322 157.37 T 31-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DY252_04240 022954fab31dfe9fd0d199cfe5f62772 322 Pfam PF01636 Phosphotransferase enzyme family 28 259 3.5E-33 T 31-10-2018 IPR002575 Aminoglycoside phosphotransferase DY252_04240 022954fab31dfe9fd0d199cfe5f62772 322 Gene3D G3DSA:3.90.1200.10 106 321 4.0E-80 T 31-10-2018 DY252_04240 022954fab31dfe9fd0d199cfe5f62772 322 Gene3D G3DSA:3.30.200.20 1 104 1.1E-38 T 31-10-2018 DY252_04240 022954fab31dfe9fd0d199cfe5f62772 322 SUPERFAMILY SSF56112 5 312 5.98E-79 T 31-10-2018 IPR011009 Protein kinase-like domain superfamily DY252_04240 022954fab31dfe9fd0d199cfe5f62772 322 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 309 1.0E-118 T 31-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DY252_15225 4f4d82581babfb0021f354816b0f0810 324 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 142 317 4.4E-57 T 31-10-2018 IPR003770 Endolytic murein transglycosylase DY252_15225 4f4d82581babfb0021f354816b0f0810 324 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 7 319 32.864 T 31-10-2018 IPR003770 Endolytic murein transglycosylase DY252_15225 4f4d82581babfb0021f354816b0f0810 324 Gene3D G3DSA:3.30.160.60 291 324 3.1E-16 T 31-10-2018 DY252_15225 4f4d82581babfb0021f354816b0f0810 324 Gene3D G3DSA:1.10.8.1150 37 112 2.4E-9 T 31-10-2018 DY252_15225 4f4d82581babfb0021f354816b0f0810 324 Pfam PF02618 YceG-like family 43 316 2.5E-77 T 31-10-2018 IPR003770 Endolytic murein transglycosylase DY252_09550 149c2ca99238bbca1fccd6d9004aa496 310 PRINTS PR01270 Histone deacetylase superfamily signature 236 246 2.8E-16 T 31-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_09550 149c2ca99238bbca1fccd6d9004aa496 310 PRINTS PR01270 Histone deacetylase superfamily signature 155 170 2.8E-16 T 31-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_09550 149c2ca99238bbca1fccd6d9004aa496 310 PRINTS PR01270 Histone deacetylase superfamily signature 121 144 2.8E-16 T 31-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_09550 149c2ca99238bbca1fccd6d9004aa496 310 Pfam PF00850 Histone deacetylase domain 20 306 3.1E-83 T 31-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_09550 149c2ca99238bbca1fccd6d9004aa496 310 Gene3D G3DSA:3.40.800.20 1 308 1.2E-111 T 31-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DY252_09550 149c2ca99238bbca1fccd6d9004aa496 310 SUPERFAMILY SSF52768 2 308 5.28E-101 T 31-10-2018 IPR023696 Ureohydrolase domain superfamily DY252_13755 624d88087d2f36e51bf50d2f2e1ed3bc 198 SUPERFAMILY SSF48498 80 192 1.11E-16 T 31-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DY252_13755 624d88087d2f36e51bf50d2f2e1ed3bc 198 Gene3D G3DSA:1.10.357.10 6 191 1.2E-42 T 31-10-2018 DY252_13755 624d88087d2f36e51bf50d2f2e1ed3bc 198 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 196 81.241 T 31-10-2018 IPR017757 Transcriptional repressor BetI DY252_13755 624d88087d2f36e51bf50d2f2e1ed3bc 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 3.2E-13 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_13755 624d88087d2f36e51bf50d2f2e1ed3bc 198 SUPERFAMILY SSF46689 5 86 2.15E-17 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_13755 624d88087d2f36e51bf50d2f2e1ed3bc 198 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 183 6.0E-72 T 31-10-2018 IPR017757 Transcriptional repressor BetI DY252_13755 624d88087d2f36e51bf50d2f2e1ed3bc 198 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 82 188 3.6E-25 T 31-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal DY252_13755 624d88087d2f36e51bf50d2f2e1ed3bc 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.2E-5 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_13755 624d88087d2f36e51bf50d2f2e1ed3bc 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.2E-5 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_02780 231a6a19a6fc95cdcd28faa23922370f 303 Pfam PF00892 EamA-like transporter family 143 275 2.6E-23 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_02780 231a6a19a6fc95cdcd28faa23922370f 303 Pfam PF00892 EamA-like transporter family 8 133 3.8E-11 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_02780 231a6a19a6fc95cdcd28faa23922370f 303 SUPERFAMILY SSF103481 42 136 8.89E-9 T 31-10-2018 DY252_02780 231a6a19a6fc95cdcd28faa23922370f 303 SUPERFAMILY SSF103481 177 278 7.72E-15 T 31-10-2018 DY252_16145 33f7dbcc54ed68cd6699b8d1ed01fadb 425 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 316 1.1E-54 T 31-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DY252_16145 33f7dbcc54ed68cd6699b8d1ed01fadb 425 SUPERFAMILY SSF54862 327 404 9.57E-13 T 31-10-2018 DY252_16145 33f7dbcc54ed68cd6699b8d1ed01fadb 425 SUPERFAMILY SSF51395 1 321 2.13E-71 T 31-10-2018 DY252_16145 33f7dbcc54ed68cd6699b8d1ed01fadb 425 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 382 393 - T 31-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DY252_16145 33f7dbcc54ed68cd6699b8d1ed01fadb 425 Pfam PF01180 Dihydroorotate dehydrogenase 4 304 3.3E-28 T 31-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DY252_16145 33f7dbcc54ed68cd6699b8d1ed01fadb 425 Pfam PF14697 4Fe-4S dicluster domain 338 400 2.6E-23 T 31-10-2018 DY252_16145 33f7dbcc54ed68cd6699b8d1ed01fadb 425 Gene3D G3DSA:3.30.70.20 309 417 5.2E-23 T 31-10-2018 DY252_16145 33f7dbcc54ed68cd6699b8d1ed01fadb 425 Gene3D G3DSA:3.20.20.70 4 308 9.1E-102 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_16145 33f7dbcc54ed68cd6699b8d1ed01fadb 425 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 345 356 - T 31-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DY252_15290 927a3a09bd06cf4aa5ff43a0e96e9397 470 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 443 2.9E-170 T 31-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 DY252_15290 927a3a09bd06cf4aa5ff43a0e96e9397 470 Pfam PF13481 AAA domain 72 220 8.9E-15 T 31-10-2018 DY252_15290 927a3a09bd06cf4aa5ff43a0e96e9397 470 SUPERFAMILY SSF54211 253 455 7.97E-38 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_15290 927a3a09bd06cf4aa5ff43a0e96e9397 470 Gene3D G3DSA:3.30.230.10 325 457 1.5E-15 T 31-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DY252_15290 927a3a09bd06cf4aa5ff43a0e96e9397 470 SMART SM00382 89 242 1.1E-9 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_15290 927a3a09bd06cf4aa5ff43a0e96e9397 470 Hamap MF_01498 DNA repair protein RadA [radA]. 21 456 42.88 T 31-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 DY252_15290 927a3a09bd06cf4aa5ff43a0e96e9397 470 SUPERFAMILY SSF52540 69 291 1.08E-48 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_15290 927a3a09bd06cf4aa5ff43a0e96e9397 470 PRINTS PR01874 DNA repair protein radA signature 320 343 3.9E-88 T 31-10-2018 DY252_15290 927a3a09bd06cf4aa5ff43a0e96e9397 470 PRINTS PR01874 DNA repair protein radA signature 172 196 3.9E-88 T 31-10-2018 DY252_15290 927a3a09bd06cf4aa5ff43a0e96e9397 470 PRINTS PR01874 DNA repair protein radA signature 211 239 3.9E-88 T 31-10-2018 DY252_15290 927a3a09bd06cf4aa5ff43a0e96e9397 470 PRINTS PR01874 DNA repair protein radA signature 122 139 3.9E-88 T 31-10-2018 DY252_15290 927a3a09bd06cf4aa5ff43a0e96e9397 470 PRINTS PR01874 DNA repair protein radA signature 10 34 3.9E-88 T 31-10-2018 DY252_15290 927a3a09bd06cf4aa5ff43a0e96e9397 470 PRINTS PR01874 DNA repair protein radA signature 246 272 3.9E-88 T 31-10-2018 DY252_15290 927a3a09bd06cf4aa5ff43a0e96e9397 470 PRINTS PR01874 DNA repair protein radA signature 81 109 3.9E-88 T 31-10-2018 DY252_15290 927a3a09bd06cf4aa5ff43a0e96e9397 470 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 361 431 3.0E-7 T 31-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DY252_15290 927a3a09bd06cf4aa5ff43a0e96e9397 470 Gene3D G3DSA:3.40.50.300 64 278 2.3E-40 T 31-10-2018 DY252_21745 c2aeaccab177d07318f192c0979c72c9 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 96 21.612 T 31-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DY252_21745 c2aeaccab177d07318f192c0979c72c9 107 Gene3D G3DSA:3.30.1310.10 1 107 2.2E-38 T 31-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DY252_21745 c2aeaccab177d07318f192c0979c72c9 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 102 1.3E-27 T 31-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DY252_21745 c2aeaccab177d07318f192c0979c72c9 107 PIRSF PIRSF004555 1 107 6.9E-36 T 31-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DY252_21745 c2aeaccab177d07318f192c0979c72c9 107 Pfam PF02575 YbaB/EbfC DNA-binding family 8 98 1.8E-31 T 31-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DY252_21745 c2aeaccab177d07318f192c0979c72c9 107 SUPERFAMILY SSF82607 8 101 2.75E-32 T 31-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DY252_17600 8adaf0c2458d930d8b248200d056a835 175 SUPERFAMILY SSF141457 35 175 4.84E-20 T 31-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily DY252_17600 8adaf0c2458d930d8b248200d056a835 175 Gene3D G3DSA:2.30.290.10 21 175 8.3E-26 T 31-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily DY252_17600 8adaf0c2458d930d8b248200d056a835 175 Pfam PF02623 FliW protein 51 175 3.8E-19 T 31-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 DY252_00080 d109a65b49fea49d099be6386a910e60 216 SUPERFAMILY SSF51182 4 182 7.51E-69 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_00080 d109a65b49fea49d099be6386a910e60 216 Gene3D G3DSA:2.60.120.10 3 194 1.9E-65 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_00080 d109a65b49fea49d099be6386a910e60 216 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 10 176 1.0E-47 T 31-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DY252_00080 d109a65b49fea49d099be6386a910e60 216 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 8 179 1.5E-64 T 31-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DY252_00080 d109a65b49fea49d099be6386a910e60 216 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 5 180 2.1E-60 T 31-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DY252_09300 cc2dc9483831a76df41ddffecdfa1f0d 189 Gene3D G3DSA:3.40.630.30 31 181 1.7E-26 T 31-10-2018 DY252_09300 cc2dc9483831a76df41ddffecdfa1f0d 189 SUPERFAMILY SSF55729 35 172 5.66E-27 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_09300 cc2dc9483831a76df41ddffecdfa1f0d 189 Pfam PF00583 Acetyltransferase (GNAT) family 76 163 4.6E-15 T 31-10-2018 IPR000182 GNAT domain DY252_17105 cc8618cc58ec13de1b1b7a918f868e82 320 SUPERFAMILY SSF51905 18 314 1.95E-35 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_17105 cc8618cc58ec13de1b1b7a918f868e82 320 Gene3D G3DSA:3.50.50.60 137 247 2.2E-92 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_17105 cc8618cc58ec13de1b1b7a918f868e82 320 Gene3D G3DSA:3.50.50.60 19 312 2.2E-92 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_17105 cc8618cc58ec13de1b1b7a918f868e82 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 20 42 1.3E-18 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_17105 cc8618cc58ec13de1b1b7a918f868e82 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 161 185 1.3E-18 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_17105 cc8618cc58ec13de1b1b7a918f868e82 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 146 158 1.3E-18 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_17105 cc8618cc58ec13de1b1b7a918f868e82 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 124 132 1.3E-18 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_17105 cc8618cc58ec13de1b1b7a918f868e82 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 299 1.3E-18 T 31-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DY252_17105 cc8618cc58ec13de1b1b7a918f868e82 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 21 40 1.8E-18 T 31-10-2018 DY252_17105 cc8618cc58ec13de1b1b7a918f868e82 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 1.8E-18 T 31-10-2018 DY252_17105 cc8618cc58ec13de1b1b7a918f868e82 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 228 244 1.8E-18 T 31-10-2018 DY252_17105 cc8618cc58ec13de1b1b7a918f868e82 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 123 141 1.8E-18 T 31-10-2018 DY252_17105 cc8618cc58ec13de1b1b7a918f868e82 320 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 19 306 1.9E-22 T 31-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DY252_14665 fce91ec2af679d0456895460937b0993 432 Pfam PF02653 Branched-chain amino acid transport system / permease component 145 410 5.8E-34 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_06430 f13366d2cb084a66b5646a8be438d4b5 322 Gene3D G3DSA:3.30.1700.10 150 318 8.2E-61 T 31-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DY252_06430 f13366d2cb084a66b5646a8be438d4b5 322 SUPERFAMILY SSF54211 155 297 3.41E-49 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_06430 f13366d2cb084a66b5646a8be438d4b5 322 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 22 299 43.136 T 31-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DY252_06430 f13366d2cb084a66b5646a8be438d4b5 322 SUPERFAMILY SSF54211 23 147 1.59E-39 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_06430 f13366d2cb084a66b5646a8be438d4b5 322 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 24 295 4.6E-106 T 31-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DY252_06430 f13366d2cb084a66b5646a8be438d4b5 322 Gene3D G3DSA:3.30.230.20 21 149 5.0E-47 T 31-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DY252_06430 f13366d2cb084a66b5646a8be438d4b5 322 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 23 308 3.6E-105 T 31-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DY252_09710 1280ad6c76025e68b5d6a1e2fdca893d 285 Gene3D G3DSA:3.40.50.12370 5 285 6.3E-30 T 31-10-2018 DY252_09710 1280ad6c76025e68b5d6a1e2fdca893d 285 SUPERFAMILY SSF52402 1 157 1.42E-7 T 31-10-2018 DY252_09710 1280ad6c76025e68b5d6a1e2fdca893d 285 SUPERFAMILY SSF52402 166 285 4.24E-18 T 31-10-2018 DY252_09710 1280ad6c76025e68b5d6a1e2fdca893d 285 Pfam PF00582 Universal stress protein family 204 283 1.4E-8 T 31-10-2018 IPR006016 UspA DY252_12560 ac05119ad81737bdd295374f07e077bf 370 Gene3D G3DSA:3.40.50.2300 67 161 3.0E-33 T 31-10-2018 DY252_12560 ac05119ad81737bdd295374f07e077bf 370 Gene3D G3DSA:3.40.50.2300 162 266 3.0E-33 T 31-10-2018 DY252_12560 ac05119ad81737bdd295374f07e077bf 370 Pfam PF13407 Periplasmic binding protein domain 59 313 1.3E-33 T 31-10-2018 IPR025997 Periplasmic binding protein DY252_12560 ac05119ad81737bdd295374f07e077bf 370 SUPERFAMILY SSF53822 56 323 1.65E-35 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_15730 bf848c8006240f919957a11c8f98d99c 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 453 5.5E-13 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_15730 bf848c8006240f919957a11c8f98d99c 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 467 5.5E-13 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_15730 bf848c8006240f919957a11c8f98d99c 516 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 492 5.5E-13 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_15730 bf848c8006240f919957a11c8f98d99c 516 SMART SM00304 253 305 1.0E-11 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_15730 bf848c8006240f919957a11c8f98d99c 516 SUPERFAMILY SSF47384 290 362 9.22E-13 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_15730 bf848c8006240f919957a11c8f98d99c 516 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 409 512 2.0E-20 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_15730 bf848c8006240f919957a11c8f98d99c 516 Gene3D G3DSA:1.10.287.130 259 365 3.0E-21 T 31-10-2018 DY252_15730 bf848c8006240f919957a11c8f98d99c 516 Pfam PF00512 His Kinase A (phospho-acceptor) domain 307 363 2.0E-9 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_15730 bf848c8006240f919957a11c8f98d99c 516 SUPERFAMILY SSF55874 363 512 8.25E-33 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_15730 bf848c8006240f919957a11c8f98d99c 516 Gene3D G3DSA:3.30.565.10 367 515 1.3E-30 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_15730 bf848c8006240f919957a11c8f98d99c 516 Pfam PF00672 HAMP domain 253 302 1.5E-10 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_15730 bf848c8006240f919957a11c8f98d99c 516 SMART SM00388 306 364 1.1E-9 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_15730 bf848c8006240f919957a11c8f98d99c 516 SMART SM00387 404 514 5.5E-31 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_02455 00ec2e33f3979a315a483228f87cbc5a 92 SUPERFAMILY SSF54909 1 92 8.76E-24 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_02455 00ec2e33f3979a315a483228f87cbc5a 92 Pfam PF03795 YCII-related domain 1 89 8.9E-17 T 31-10-2018 IPR005545 YCII-related DY252_02455 00ec2e33f3979a315a483228f87cbc5a 92 Gene3D G3DSA:3.30.70.1060 1 92 2.7E-30 T 31-10-2018 DY252_10535 4e307bdb92664b8e7dc9b603cf149b96 610 SUPERFAMILY SSF103515 278 535 2.09E-23 T 31-10-2018 IPR036709 Autotransporter beta-domain superfamily DY252_10535 4e307bdb92664b8e7dc9b603cf149b96 610 Gene3D G3DSA:2.40.128.130 268 536 4.9E-30 T 31-10-2018 IPR036709 Autotransporter beta-domain superfamily DY252_10535 4e307bdb92664b8e7dc9b603cf149b96 610 SMART SM00869 282 523 9.8E-24 T 31-10-2018 IPR005546 Autotransporter beta-domain DY252_10535 4e307bdb92664b8e7dc9b603cf149b96 610 Pfam PF03797 Autotransporter beta-domain 285 498 4.0E-24 T 31-10-2018 IPR005546 Autotransporter beta-domain DY252_15405 b68e198a88c39bc3df338362cfad77f6 560 Pfam PF00394 Multicopper oxidase 153 321 3.6E-28 T 31-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 DY252_15405 b68e198a88c39bc3df338362cfad77f6 560 Gene3D G3DSA:2.60.40.420 14 141 2.7E-38 T 31-10-2018 IPR008972 Cupredoxin DY252_15405 b68e198a88c39bc3df338362cfad77f6 560 ProSitePatterns PS00080 Multicopper oxidases signature 2. 529 540 - T 31-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 DY252_15405 b68e198a88c39bc3df338362cfad77f6 560 Gene3D G3DSA:2.60.40.420 147 349 1.4E-35 T 31-10-2018 IPR008972 Cupredoxin DY252_15405 b68e198a88c39bc3df338362cfad77f6 560 SUPERFAMILY SSF49503 146 359 4.41E-47 T 31-10-2018 IPR008972 Cupredoxin DY252_15405 b68e198a88c39bc3df338362cfad77f6 560 Pfam PF07732 Multicopper oxidase 38 143 1.9E-38 T 31-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 DY252_15405 b68e198a88c39bc3df338362cfad77f6 560 Gene3D G3DSA:2.60.40.420 417 547 2.6E-30 T 31-10-2018 IPR008972 Cupredoxin DY252_15405 b68e198a88c39bc3df338362cfad77f6 560 SUPERFAMILY SSF49503 409 546 4.08E-35 T 31-10-2018 IPR008972 Cupredoxin DY252_15405 b68e198a88c39bc3df338362cfad77f6 560 SUPERFAMILY SSF49503 18 145 2.72E-37 T 31-10-2018 IPR008972 Cupredoxin DY252_15405 b68e198a88c39bc3df338362cfad77f6 560 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 19 391 3.9E-149 T 31-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 DY252_15405 b68e198a88c39bc3df338362cfad77f6 560 Pfam PF07731 Multicopper oxidase 430 547 1.6E-25 T 31-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 DY252_15405 b68e198a88c39bc3df338362cfad77f6 560 ProSitePatterns PS00079 Multicopper oxidases signature 1. 524 544 - T 31-10-2018 IPR033138 Multicopper oxidases, conserved site DY252_11565 c8882f9cc805c5164928d5e9d4d0464e 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 88 106 - T 31-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DY252_11565 c8882f9cc805c5164928d5e9d4d0464e 331 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 5 322 2.2E-150 T 31-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 DY252_11565 c8882f9cc805c5164928d5e9d4d0464e 331 Gene3D G3DSA:1.20.120.1460 248 327 4.5E-21 T 31-10-2018 DY252_11565 c8882f9cc805c5164928d5e9d4d0464e 331 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 323 52.937 T 31-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 DY252_11565 c8882f9cc805c5164928d5e9d4d0464e 331 Gene3D G3DSA:3.20.20.70 3 245 1.8E-73 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_11565 c8882f9cc805c5164928d5e9d4d0464e 331 Pfam PF01207 Dihydrouridine synthase (Dus) 9 314 2.1E-87 T 31-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DY252_11565 c8882f9cc805c5164928d5e9d4d0464e 331 PIRSF PIRSF006621 1 328 2.4E-77 T 31-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DY252_11565 c8882f9cc805c5164928d5e9d4d0464e 331 SUPERFAMILY SSF51395 6 319 7.79E-74 T 31-10-2018 DY252_18065 5ad5d1c42cd929290831e831f058c772 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 31-10-2018 IPR023765 Solute-binding protein family 5, conserved site DY252_18065 5ad5d1c42cd929290831e831f058c772 535 SUPERFAMILY SSF53850 29 531 2.17E-149 T 31-10-2018 DY252_18065 5ad5d1c42cd929290831e831f058c772 535 Gene3D G3DSA:3.40.190.10 211 522 8.9E-176 T 31-10-2018 DY252_18065 5ad5d1c42cd929290831e831f058c772 535 PIRSF PIRSF002741 4 529 1.2E-116 T 31-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DY252_18065 5ad5d1c42cd929290831e831f058c772 535 Gene3D G3DSA:3.90.76.10 50 210 8.9E-176 T 31-10-2018 DY252_18065 5ad5d1c42cd929290831e831f058c772 535 Gene3D G3DSA:3.10.105.10 292 509 8.9E-176 T 31-10-2018 DY252_18065 5ad5d1c42cd929290831e831f058c772 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 452 6.3E-99 T 31-10-2018 IPR000914 Solute-binding protein family 5 domain DY252_17925 4acfcbfb865a59ae4f115b0e82bae2b9 558 PIRSF PIRSF006630 2 267 1.4E-72 T 31-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DY252_17925 4acfcbfb865a59ae4f115b0e82bae2b9 558 PIRSF PIRSF006630 259 556 5.9E-114 T 31-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DY252_17925 4acfcbfb865a59ae4f115b0e82bae2b9 558 Gene3D G3DSA:3.60.110.10 1 258 2.9E-77 T 31-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DY252_17925 4acfcbfb865a59ae4f115b0e82bae2b9 558 Gene3D G3DSA:3.40.50.620 271 558 1.6E-117 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_17925 4acfcbfb865a59ae4f115b0e82bae2b9 558 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 5 555 28.414 T 31-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DY252_17925 4acfcbfb865a59ae4f115b0e82bae2b9 558 SUPERFAMILY SSF56317 3 256 5.49E-56 T 31-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DY252_17925 4acfcbfb865a59ae4f115b0e82bae2b9 558 Pfam PF02540 NAD synthase 273 530 1.5E-70 T 31-10-2018 IPR022310 NAD/GMP synthase DY252_17925 4acfcbfb865a59ae4f115b0e82bae2b9 558 Pfam PF00795 Carbon-nitrogen hydrolase 7 255 4.8E-24 T 31-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DY252_17925 4acfcbfb865a59ae4f115b0e82bae2b9 558 SUPERFAMILY SSF52402 262 538 4.66E-77 T 31-10-2018 DY252_17925 4acfcbfb865a59ae4f115b0e82bae2b9 558 TIGRFAM TIGR00552 nadE: NAD+ synthetase 280 533 1.1E-58 T 31-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 DY252_14910 2f64e7b0d4c685134cf53e6ea81b28cb 104 Pfam PF01220 Dehydroquinase class II 18 96 7.7E-19 T 31-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DY252_14910 2f64e7b0d4c685134cf53e6ea81b28cb 104 SUPERFAMILY SSF52304 23 101 1.28E-17 T 31-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DY252_14910 2f64e7b0d4c685134cf53e6ea81b28cb 104 Gene3D G3DSA:3.40.50.9100 5 102 1.5E-20 T 31-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DY252_14910 2f64e7b0d4c685134cf53e6ea81b28cb 104 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 18 96 1.0E-12 T 31-10-2018 DY252_14910 2f64e7b0d4c685134cf53e6ea81b28cb 104 PIRSF PIRSF001399 4 102 5.3E-20 T 31-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DY252_02300 addf9d7d36186d86865472d96a2872c4 389 PIRSF PIRSF001238 1 389 1.8E-144 T 31-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 DY252_02300 addf9d7d36186d86865472d96a2872c4 389 Pfam PF01979 Amidohydrolase family 54 373 1.3E-16 T 31-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DY252_02300 addf9d7d36186d86865472d96a2872c4 389 SUPERFAMILY SSF51556 56 346 1.64E-65 T 31-10-2018 IPR032466 Metal-dependent hydrolase DY252_02300 addf9d7d36186d86865472d96a2872c4 389 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 2 388 9.4E-130 T 31-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 DY252_02300 addf9d7d36186d86865472d96a2872c4 389 Gene3D G3DSA:2.30.40.10 4 388 2.4E-144 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_02300 addf9d7d36186d86865472d96a2872c4 389 SUPERFAMILY SSF51338 1 382 8.99E-20 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_02300 addf9d7d36186d86865472d96a2872c4 389 Gene3D G3DSA:3.20.20.140 57 341 2.4E-144 T 31-10-2018 DY252_15590 d4e8f01b095e6f9684061c49a76e14e2 328 Gene3D G3DSA:3.40.190.10 119 313 4.5E-30 T 31-10-2018 DY252_15590 d4e8f01b095e6f9684061c49a76e14e2 328 SUPERFAMILY SSF46785 28 136 3.1E-20 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_15590 d4e8f01b095e6f9684061c49a76e14e2 328 Pfam PF03466 LysR substrate binding domain 116 322 5.5E-26 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_15590 d4e8f01b095e6f9684061c49a76e14e2 328 Gene3D G3DSA:3.40.190.10 192 295 4.5E-30 T 31-10-2018 DY252_15590 d4e8f01b095e6f9684061c49a76e14e2 328 SUPERFAMILY SSF53850 117 325 4.34E-24 T 31-10-2018 DY252_15590 d4e8f01b095e6f9684061c49a76e14e2 328 Gene3D G3DSA:1.10.10.10 28 115 3.3E-21 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_15590 d4e8f01b095e6f9684061c49a76e14e2 328 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 30 89 2.1E-15 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_07560 273da82345f13b339d62d102500ce409 581 SUPERFAMILY SSF116726 212 289 1.57E-5 T 31-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DY252_07560 273da82345f13b339d62d102500ce409 581 Gene3D G3DSA:3.30.70.1450 298 372 3.1E-8 T 31-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DY252_07560 273da82345f13b339d62d102500ce409 581 Pfam PF03600 Citrate transporter 18 406 1.8E-26 T 31-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 DY252_07560 273da82345f13b339d62d102500ce409 581 SUPERFAMILY SSF116726 296 377 2.88E-13 T 31-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DY252_19015 b4efeeafcb85f184afda230a2d9632b7 250 SUPERFAMILY SSF52540 21 246 4.15E-54 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_19015 b4efeeafcb85f184afda230a2d9632b7 250 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_19015 b4efeeafcb85f184afda230a2d9632b7 250 Gene3D G3DSA:3.40.50.300 18 250 1.1E-55 T 31-10-2018 DY252_19015 b4efeeafcb85f184afda230a2d9632b7 250 Pfam PF00005 ABC transporter 36 178 1.3E-27 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_19015 b4efeeafcb85f184afda230a2d9632b7 250 SMART SM00382 44 227 2.6E-8 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 PRINTS PR00943 Copper-transporting ATPase signature 242 261 3.2E-15 T 31-10-2018 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 PRINTS PR00943 Copper-transporting ATPase signature 651 668 3.2E-15 T 31-10-2018 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 PRINTS PR00943 Copper-transporting ATPase signature 184 203 3.2E-15 T 31-10-2018 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 PRINTS PR00943 Copper-transporting ATPase signature 262 280 3.2E-15 T 31-10-2018 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 PRINTS PR00943 Copper-transporting ATPase signature 458 473 3.2E-15 T 31-10-2018 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 PRINTS PR00943 Copper-transporting ATPase signature 396 410 3.2E-15 T 31-10-2018 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 Pfam PF00702 haloacid dehalogenase-like hydrolase 471 688 1.3E-41 T 31-10-2018 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 181 784 8.0E-173 T 31-10-2018 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 Gene3D G3DSA:3.40.50.1000 456 726 4.2E-89 T 31-10-2018 IPR023214 HAD superfamily DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 Pfam PF00122 E1-E2 ATPase 273 453 1.3E-50 T 31-10-2018 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 200 783 8.4E-185 T 31-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 244 752 3.4E-85 T 31-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 SUPERFAMILY SSF81653 280 373 3.66E-25 T 31-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 Pfam PF04945 YHS domain 22 64 4.3E-12 T 31-10-2018 IPR007029 YHS domain DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 Gene3D G3DSA:3.40.1110.10 486 606 4.2E-89 T 31-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 Gene3D G3DSA:2.70.150.20 266 378 1.6E-39 T 31-10-2018 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 Gene3D G3DSA:1.10.620.20 3 82 1.9E-5 T 31-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 477 483 - T 31-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 SMART SM00746 24 62 6.2E-6 T 31-10-2018 IPR011017 TRASH domain DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 SUPERFAMILY SSF56784 473 781 2.58E-55 T 31-10-2018 IPR036412 HAD-like superfamily DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 697 709 3.2E-25 T 31-10-2018 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 674 693 3.2E-25 T 31-10-2018 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 323 337 3.2E-25 T 31-10-2018 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 475 489 3.2E-25 T 31-10-2018 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 599 610 3.2E-25 T 31-10-2018 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 621 631 3.2E-25 T 31-10-2018 DY252_15435 49833cf6e4b8c029bafdeff11f17a30c 788 SUPERFAMILY SSF81665 238 748 2.48E-13 T 31-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DY252_10225 4233780496f118166b9d7afd018311d0 334 SUPERFAMILY SSF52540 2 332 1.7E-107 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_10225 4233780496f118166b9d7afd018311d0 334 PIRSF PIRSF026760 3 334 2.5E-97 T 31-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 DY252_10225 4233780496f118166b9d7afd018311d0 334 Gene3D G3DSA:3.40.50.720 2 127 1.8E-21 T 31-10-2018 DY252_10225 4233780496f118166b9d7afd018311d0 334 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 131 328 3.0E-72 T 31-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop DY252_10225 4233780496f118166b9d7afd018311d0 334 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 40 124 4.2E-27 T 31-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain DY252_10225 4233780496f118166b9d7afd018311d0 334 Gene3D G3DSA:3.40.50.300 128 333 1.6E-72 T 31-10-2018 DY252_02230 1915b687a5f1563f2d8014d48bb8c410 702 SUPERFAMILY SSF53448 121 407 1.78E-27 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_02230 1915b687a5f1563f2d8014d48bb8c410 702 Pfam PF13632 Glycosyl transferase family group 2 218 412 2.5E-13 T 31-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DY252_02230 1915b687a5f1563f2d8014d48bb8c410 702 Gene3D G3DSA:3.90.550.10 117 346 8.0E-15 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_05475 fa9563f9de8bda60d1f48e02b5f2b3e5 261 Gene3D G3DSA:1.10.10.10 23 88 2.5E-19 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_05475 fa9563f9de8bda60d1f48e02b5f2b3e5 261 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 8.4E-5 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_05475 fa9563f9de8bda60d1f48e02b5f2b3e5 261 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 8.4E-5 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_05475 fa9563f9de8bda60d1f48e02b5f2b3e5 261 Gene3D G3DSA:1.20.120.530 90 240 9.8E-24 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_05475 fa9563f9de8bda60d1f48e02b5f2b3e5 261 Pfam PF07729 FCD domain 97 233 2.0E-17 T 31-10-2018 IPR011711 GntR, C-terminal DY252_05475 fa9563f9de8bda60d1f48e02b5f2b3e5 261 SMART SM00895 97 234 3.0E-22 T 31-10-2018 IPR011711 GntR, C-terminal DY252_05475 fa9563f9de8bda60d1f48e02b5f2b3e5 261 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 87 7.0E-13 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_05475 fa9563f9de8bda60d1f48e02b5f2b3e5 261 SUPERFAMILY SSF48008 93 237 1.07E-17 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_05475 fa9563f9de8bda60d1f48e02b5f2b3e5 261 SMART SM00345 29 87 1.0E-12 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_05475 fa9563f9de8bda60d1f48e02b5f2b3e5 261 SUPERFAMILY SSF46785 27 116 4.22E-17 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_10595 e9197dc70d9de57326383aba5e823b34 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.4E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_10595 e9197dc70d9de57326383aba5e823b34 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 428 1.4E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_10595 e9197dc70d9de57326383aba5e823b34 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 478 507 1.4E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_10595 e9197dc70d9de57326383aba5e823b34 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 430 459 1.4E-20 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_10595 e9197dc70d9de57326383aba5e823b34 566 SUPERFAMILY SSF58104 243 556 5.36E-60 T 31-10-2018 DY252_10595 e9197dc70d9de57326383aba5e823b34 566 SMART SM00304 463 516 77.0 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_10595 e9197dc70d9de57326383aba5e823b34 566 SMART SM00304 213 266 2.2E-4 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_10595 e9197dc70d9de57326383aba5e823b34 566 SMART SM01049 34 129 3.7E-26 T 31-10-2018 IPR033480 Single Cache domain 2 DY252_10595 e9197dc70d9de57326383aba5e823b34 566 Gene3D G3DSA:1.10.8.500 214 263 4.1E-10 T 31-10-2018 DY252_10595 e9197dc70d9de57326383aba5e823b34 566 Gene3D G3DSA:1.10.287.950 264 562 4.9E-54 T 31-10-2018 DY252_10595 e9197dc70d9de57326383aba5e823b34 566 SMART SM00283 303 557 3.1E-49 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_10595 e9197dc70d9de57326383aba5e823b34 566 Pfam PF17200 Single Cache domain 2 38 189 5.8E-35 T 31-10-2018 IPR033480 Single Cache domain 2 DY252_10595 e9197dc70d9de57326383aba5e823b34 566 Gene3D G3DSA:3.30.450.20 36 189 2.6E-40 T 31-10-2018 DY252_10595 e9197dc70d9de57326383aba5e823b34 566 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 366 528 4.5E-32 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_15305 f4bac0ca04b383f8b4ea894fb2ea8716 237 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_15305 f4bac0ca04b383f8b4ea894fb2ea8716 237 Gene3D G3DSA:3.40.50.720 1 237 6.4E-64 T 31-10-2018 DY252_15305 f4bac0ca04b383f8b4ea894fb2ea8716 237 SUPERFAMILY SSF51735 3 225 1.14E-55 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_15305 f4bac0ca04b383f8b4ea894fb2ea8716 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 8.8E-25 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15305 f4bac0ca04b383f8b4ea894fb2ea8716 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 8.8E-25 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15305 f4bac0ca04b383f8b4ea894fb2ea8716 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 8.8E-25 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15305 f4bac0ca04b383f8b4ea894fb2ea8716 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 8.8E-25 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15305 f4bac0ca04b383f8b4ea894fb2ea8716 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 8.8E-25 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15305 f4bac0ca04b383f8b4ea894fb2ea8716 237 Pfam PF00106 short chain dehydrogenase 11 202 3.3E-46 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08440 893b4e5ecb224902570f793f209e7370 331 Pfam PF04085 rod shape-determining protein MreC 133 271 1.9E-33 T 31-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DY252_08440 893b4e5ecb224902570f793f209e7370 331 Gene3D G3DSA:2.40.10.340 131 189 2.5E-31 T 31-10-2018 DY252_08440 893b4e5ecb224902570f793f209e7370 331 Gene3D G3DSA:2.40.10.350 190 254 2.5E-31 T 31-10-2018 DY252_08440 893b4e5ecb224902570f793f209e7370 331 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 24 256 3.4E-39 T 31-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DY252_14025 c0fa76330e01cf01ee59e6b55e569b13 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 152 176 4.8E-9 T 31-10-2018 DY252_14025 c0fa76330e01cf01ee59e6b55e569b13 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 314 338 4.8E-9 T 31-10-2018 DY252_14025 c0fa76330e01cf01ee59e6b55e569b13 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 122 142 4.8E-9 T 31-10-2018 DY252_14025 c0fa76330e01cf01ee59e6b55e569b13 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 31 55 4.8E-9 T 31-10-2018 DY252_14025 c0fa76330e01cf01ee59e6b55e569b13 473 Pfam PF07690 Major Facilitator Superfamily 32 421 2.8E-53 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_14025 c0fa76330e01cf01ee59e6b55e569b13 473 Gene3D G3DSA:1.20.1250.20 271 460 5.0E-23 T 31-10-2018 DY252_14025 c0fa76330e01cf01ee59e6b55e569b13 473 SUPERFAMILY SSF103473 14 455 1.28E-66 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_14025 c0fa76330e01cf01ee59e6b55e569b13 473 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 27 429 8.1E-70 T 31-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DY252_14025 c0fa76330e01cf01ee59e6b55e569b13 473 Gene3D G3DSA:1.20.1720.10 29 268 2.1E-45 T 31-10-2018 DY252_15565 82d922a01e5a894091f58bebe6ab9fd3 225 Gene3D G3DSA:3.40.50.1000 5 193 1.8E-44 T 31-10-2018 IPR023214 HAD superfamily DY252_15565 82d922a01e5a894091f58bebe6ab9fd3 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 190 4.6E-32 T 31-10-2018 DY252_15565 82d922a01e5a894091f58bebe6ab9fd3 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 183 1.9E-6 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_15565 82d922a01e5a894091f58bebe6ab9fd3 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 7.1E-6 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_15565 82d922a01e5a894091f58bebe6ab9fd3 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 101 114 7.1E-6 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_15565 82d922a01e5a894091f58bebe6ab9fd3 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 7.1E-6 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_15565 82d922a01e5a894091f58bebe6ab9fd3 225 Gene3D G3DSA:1.10.150.240 17 87 1.8E-44 T 31-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DY252_15565 82d922a01e5a894091f58bebe6ab9fd3 225 SUPERFAMILY SSF56784 1 220 1.29E-47 T 31-10-2018 IPR036412 HAD-like superfamily DY252_12865 0a5224af5c4845d49507ca34eba597c4 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 2 149 21.081 T 31-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DY252_12865 0a5224af5c4845d49507ca34eba597c4 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 8 144 5.2E-30 T 31-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DY252_12865 0a5224af5c4845d49507ca34eba597c4 154 SUPERFAMILY SSF52121 4 148 1.57E-42 T 31-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DY252_12865 0a5224af5c4845d49507ca34eba597c4 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 6 145 5.0E-40 T 31-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DY252_12865 0a5224af5c4845d49507ca34eba597c4 154 Gene3D G3DSA:3.40.50.960 1 149 2.8E-47 T 31-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DY252_14410 373939a5accddffe848649506d9723ae 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 16 129 9.0E-18 T 31-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DY252_08385 a34a31c7fa3e17766df44a7e9d77a491 101 Gene3D G3DSA:3.30.750.24 1 101 3.2E-22 T 31-10-2018 IPR036513 STAS domain superfamily DY252_08385 a34a31c7fa3e17766df44a7e9d77a491 101 SUPERFAMILY SSF52091 1 99 9.42E-24 T 31-10-2018 IPR036513 STAS domain superfamily DY252_08385 a34a31c7fa3e17766df44a7e9d77a491 101 Pfam PF01740 STAS domain 5 97 1.4E-14 T 31-10-2018 IPR002645 STAS domain DY252_00690 4226a3376c4bdb2e9170b107444e4992 249 Gene3D G3DSA:3.40.225.10 2 249 1.3E-70 T 31-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DY252_00690 4226a3376c4bdb2e9170b107444e4992 249 SMART SM01007 15 195 1.0E-54 T 31-10-2018 IPR001303 Class II aldolase/adducin N-terminal DY252_00690 4226a3376c4bdb2e9170b107444e4992 249 SUPERFAMILY SSF53639 8 222 8.24E-58 T 31-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DY252_00690 4226a3376c4bdb2e9170b107444e4992 249 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 16 194 7.5E-44 T 31-10-2018 IPR001303 Class II aldolase/adducin N-terminal DY252_06770 b25dfe812f33a17c3cef906079b500bf 348 Gene3D G3DSA:3.40.190.10 150 321 1.2E-119 T 31-10-2018 DY252_06770 b25dfe812f33a17c3cef906079b500bf 348 PIRSF PIRSF039026 1 348 4.9E-129 T 31-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like DY252_06770 b25dfe812f33a17c3cef906079b500bf 348 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 44 318 3.3E-47 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_06770 b25dfe812f33a17c3cef906079b500bf 348 Gene3D G3DSA:3.40.190.170 31 335 1.2E-119 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_08035 e7dde5000cf45597dddb7d5fcedb8678 434 SUPERFAMILY SSF55931 98 433 2.35E-104 T 31-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DY252_08035 e7dde5000cf45597dddb7d5fcedb8678 434 Gene3D G3DSA:3.10.20.70 1 98 4.9E-11 T 31-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_08035 e7dde5000cf45597dddb7d5fcedb8678 434 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 225 240 - T 31-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DY252_08035 e7dde5000cf45597dddb7d5fcedb8678 434 SUPERFAMILY SSF54368 2 96 1.03E-23 T 31-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_08035 e7dde5000cf45597dddb7d5fcedb8678 434 TIGRFAM TIGR03105 gln_synth_III: glutamine synthetase, type III 6 433 2.7E-202 T 31-10-2018 IPR017536 Glutamine synthetase, type III DY252_08035 e7dde5000cf45597dddb7d5fcedb8678 434 SMART SM01230 97 348 1.2E-112 T 31-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_08035 e7dde5000cf45597dddb7d5fcedb8678 434 Gene3D G3DSA:3.30.590.10 100 433 3.5E-109 T 31-10-2018 DY252_08035 e7dde5000cf45597dddb7d5fcedb8678 434 Pfam PF00120 Glutamine synthetase, catalytic domain 98 430 6.0E-108 T 31-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_19235 baf3d06a2b6149d6069ff0ec236142f3 286 Gene3D G3DSA:1.10.10.10 1 87 2.7E-20 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_19235 baf3d06a2b6149d6069ff0ec236142f3 286 Gene3D G3DSA:3.40.190.10 159 262 7.6E-37 T 31-10-2018 DY252_19235 baf3d06a2b6149d6069ff0ec236142f3 286 Gene3D G3DSA:3.40.190.10 88 269 7.6E-37 T 31-10-2018 DY252_19235 baf3d06a2b6149d6069ff0ec236142f3 286 Pfam PF03466 LysR substrate binding domain 86 284 1.6E-40 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_19235 baf3d06a2b6149d6069ff0ec236142f3 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.7E-17 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_19235 baf3d06a2b6149d6069ff0ec236142f3 286 SUPERFAMILY SSF53850 86 286 1.09E-38 T 31-10-2018 DY252_19235 baf3d06a2b6149d6069ff0ec236142f3 286 SUPERFAMILY SSF46785 1 106 3.83E-21 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_19235 baf3d06a2b6149d6069ff0ec236142f3 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.1E-7 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_19235 baf3d06a2b6149d6069ff0ec236142f3 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.1E-7 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_19235 baf3d06a2b6149d6069ff0ec236142f3 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.1E-7 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_06275 a06a5f20a3c2cc408b79651559ba5407 229 Pfam PF00929 Exonuclease 46 206 7.7E-17 T 31-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DY252_06275 a06a5f20a3c2cc408b79651559ba5407 229 Gene3D G3DSA:3.30.420.10 37 218 7.7E-34 T 31-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DY252_06275 a06a5f20a3c2cc408b79651559ba5407 229 SUPERFAMILY SSF53098 39 216 4.94E-37 T 31-10-2018 IPR012337 Ribonuclease H-like superfamily DY252_06275 a06a5f20a3c2cc408b79651559ba5407 229 SMART SM00479 44 218 2.2E-23 T 31-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DY252_21990 ca1b7410778a8c0d3fc51c43f899d03a 360 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 350 1.7E-89 T 31-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DY252_21990 ca1b7410778a8c0d3fc51c43f899d03a 360 SMART SM01329 7 352 4.3E-181 T 31-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DY252_21990 ca1b7410778a8c0d3fc51c43f899d03a 360 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 5 356 1.9E-174 T 31-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 DY252_21990 ca1b7410778a8c0d3fc51c43f899d03a 360 SUPERFAMILY SSF53659 4 355 3.46E-119 T 31-10-2018 DY252_21990 ca1b7410778a8c0d3fc51c43f899d03a 360 Gene3D G3DSA:3.40.718.10 2 358 8.8E-140 T 31-10-2018 DY252_21990 ca1b7410778a8c0d3fc51c43f899d03a 360 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 245 264 - T 31-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DY252_12310 cbfd2a5b0f3837225b24e8d79841e0fd 150 SUPERFAMILY SSF55811 8 143 1.76E-32 T 31-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DY252_12310 cbfd2a5b0f3837225b24e8d79841e0fd 150 Pfam PF00293 NUDIX domain 17 134 3.5E-18 T 31-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DY252_12310 cbfd2a5b0f3837225b24e8d79841e0fd 150 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 31-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DY252_12310 cbfd2a5b0f3837225b24e8d79841e0fd 150 Gene3D G3DSA:3.90.79.10 3 147 1.8E-31 T 31-10-2018 DY252_12310 cbfd2a5b0f3837225b24e8d79841e0fd 150 PRINTS PR00502 NUDIX hydrolase family signature 43 57 9.0E-7 T 31-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DY252_12310 cbfd2a5b0f3837225b24e8d79841e0fd 150 PRINTS PR00502 NUDIX hydrolase family signature 57 72 9.0E-7 T 31-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DY252_04365 87b9045eb484b7792bf19ddaf1e28b8c 340 SUPERFAMILY SSF55781 35 180 1.35E-20 T 31-10-2018 DY252_04365 87b9045eb484b7792bf19ddaf1e28b8c 340 Gene3D G3DSA:3.30.450.40 30 172 4.2E-17 T 31-10-2018 IPR029016 GAF-like domain superfamily DY252_04365 87b9045eb484b7792bf19ddaf1e28b8c 340 Pfam PF00990 Diguanylate cyclase, GGDEF domain 188 339 1.6E-30 T 31-10-2018 IPR000160 GGDEF domain DY252_04365 87b9045eb484b7792bf19ddaf1e28b8c 340 SMART SM00065 33 178 8.8E-6 T 31-10-2018 IPR003018 GAF domain GO:0005515 DY252_04365 87b9045eb484b7792bf19ddaf1e28b8c 340 SMART SM00267 177 340 2.3E-31 T 31-10-2018 IPR000160 GGDEF domain DY252_04365 87b9045eb484b7792bf19ddaf1e28b8c 340 Pfam PF01590 GAF domain 83 168 2.9E-11 T 31-10-2018 IPR003018 GAF domain GO:0005515 DY252_04365 87b9045eb484b7792bf19ddaf1e28b8c 340 Gene3D G3DSA:3.30.70.270 173 340 1.7E-39 T 31-10-2018 DY252_04365 87b9045eb484b7792bf19ddaf1e28b8c 340 SUPERFAMILY SSF55073 193 339 2.9E-32 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_04365 87b9045eb484b7792bf19ddaf1e28b8c 340 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 185 339 2.7E-31 T 31-10-2018 IPR000160 GGDEF domain DY252_05870 85e04fe3dc8029a438b79a39882e18bd 318 SUPERFAMILY SSF100950 73 316 8.37E-58 T 31-10-2018 IPR037171 NagB/RpiA transferase-like DY252_05870 85e04fe3dc8029a438b79a39882e18bd 318 Pfam PF04198 Putative sugar-binding domain 63 315 1.3E-54 T 31-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 DY252_05870 85e04fe3dc8029a438b79a39882e18bd 318 Gene3D G3DSA:1.10.10.10 3 55 7.1E-15 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_05870 85e04fe3dc8029a438b79a39882e18bd 318 Gene3D G3DSA:3.40.50.1360 56 315 4.3E-63 T 31-10-2018 DY252_22030 ade4ab8d2aa3d57ee2c146fca66429c9 358 PIRSF PIRSF031982 10 358 4.2E-90 T 31-10-2018 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL DY252_22030 ade4ab8d2aa3d57ee2c146fca66429c9 358 SUPERFAMILY SSF53474 19 310 1.79E-31 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_22030 ade4ab8d2aa3d57ee2c146fca66429c9 358 Pfam PF12697 Alpha/beta hydrolase family 93 305 7.7E-6 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_21150 f2018aee0e4443306bc9d3199477e78b 1440 Gene3D G3DSA:3.40.50.300 480 662 4.8E-9 T 31-10-2018 DY252_21150 f2018aee0e4443306bc9d3199477e78b 1440 SUPERFAMILY SSF53335 113 302 9.92E-17 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_21150 f2018aee0e4443306bc9d3199477e78b 1440 Pfam PF13872 P-loop containing NTP hydrolase pore-1 411 734 4.1E-115 T 31-10-2018 IPR039187 Strawberry notch, AAA domain DY252_21150 f2018aee0e4443306bc9d3199477e78b 1440 Pfam PF13871 C-terminal domain on Strawberry notch homologue 905 1160 6.7E-88 T 31-10-2018 IPR026937 Strawberry notch, helicase C domain DY252_21150 f2018aee0e4443306bc9d3199477e78b 1440 SUPERFAMILY SSF52540 428 688 6.38E-18 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_21150 f2018aee0e4443306bc9d3199477e78b 1440 Gene3D G3DSA:3.40.50.150 115 261 1.7E-9 T 31-10-2018 DY252_01800 7f4094ba736c61aeabc2acfb5893fb15 320 SUPERFAMILY SSF103481 51 145 4.18E-13 T 31-10-2018 DY252_01800 7f4094ba736c61aeabc2acfb5893fb15 320 SUPERFAMILY SSF103481 188 285 1.96E-8 T 31-10-2018 DY252_01800 7f4094ba736c61aeabc2acfb5893fb15 320 Pfam PF00892 EamA-like transporter family 11 141 2.6E-12 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_01800 7f4094ba736c61aeabc2acfb5893fb15 320 Pfam PF00892 EamA-like transporter family 153 282 5.4E-9 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_15530 9555557c8f8d75736ff4d918aedfadfb 185 Gene3D G3DSA:2.60.120.10 1 184 6.4E-71 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_15530 9555557c8f8d75736ff4d918aedfadfb 185 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 4 177 6.9E-70 T 31-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DY252_15530 9555557c8f8d75736ff4d918aedfadfb 185 SUPERFAMILY SSF51182 1 181 7.28E-74 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_15530 9555557c8f8d75736ff4d918aedfadfb 185 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 177 2.1E-71 T 31-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DY252_15530 9555557c8f8d75736ff4d918aedfadfb 185 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 3 177 8.0E-59 T 31-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DY252_05780 775c197a466afdb54966f4bc6fc80e15 277 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 23 255 2.5E-20 T 31-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DY252_05780 775c197a466afdb54966f4bc6fc80e15 277 Gene3D G3DSA:1.10.1020.10 74 168 2.3E-37 T 31-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 DY252_05780 775c197a466afdb54966f4bc6fc80e15 277 Gene3D G3DSA:3.40.50.150 19 247 2.3E-37 T 31-10-2018 DY252_05780 775c197a466afdb54966f4bc6fc80e15 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 67 80 6.5E-9 T 31-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DY252_05780 775c197a466afdb54966f4bc6fc80e15 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 46 60 6.5E-9 T 31-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DY252_05780 775c197a466afdb54966f4bc6fc80e15 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 188 200 6.5E-9 T 31-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DY252_05780 775c197a466afdb54966f4bc6fc80e15 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 23 39 6.5E-9 T 31-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DY252_05780 775c197a466afdb54966f4bc6fc80e15 277 PIRSF PIRSF000398 14 277 5.3E-37 T 31-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 DY252_05780 775c197a466afdb54966f4bc6fc80e15 277 SUPERFAMILY SSF53335 17 272 4.48E-54 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_10285 482ee2ea9215a211c993e865f1165d0b 374 Gene3D G3DSA:3.60.21.10 148 346 6.8E-21 T 31-10-2018 IPR029052 Metallo-dependent phosphatase-like DY252_10285 482ee2ea9215a211c993e865f1165d0b 374 Pfam PF00149 Calcineurin-like phosphoesterase 149 314 2.6E-11 T 31-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DY252_10285 482ee2ea9215a211c993e865f1165d0b 374 SUPERFAMILY SSF56300 145 373 2.58E-34 T 31-10-2018 DY252_04630 7f3cc6ff3e8b3bcc34eded3ef57cc668 828 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 389 553 1.7E-39 T 31-10-2018 IPR000160 GGDEF domain DY252_04630 7f3cc6ff3e8b3bcc34eded3ef57cc668 828 SMART SM00267 380 556 7.5E-60 T 31-10-2018 IPR000160 GGDEF domain DY252_04630 7f3cc6ff3e8b3bcc34eded3ef57cc668 828 SMART SM00091 262 329 1.5E-8 T 31-10-2018 IPR000014 PAS domain DY252_04630 7f3cc6ff3e8b3bcc34eded3ef57cc668 828 SUPERFAMILY SSF55785 250 378 5.41E-14 T 31-10-2018 IPR035965 PAS domain superfamily DY252_04630 7f3cc6ff3e8b3bcc34eded3ef57cc668 828 SMART SM00052 566 812 5.8E-125 T 31-10-2018 IPR001633 EAL domain DY252_04630 7f3cc6ff3e8b3bcc34eded3ef57cc668 828 Gene3D G3DSA:3.30.450.20 250 378 7.0E-18 T 31-10-2018 DY252_04630 7f3cc6ff3e8b3bcc34eded3ef57cc668 828 Pfam PF00989 PAS fold 263 353 9.4E-8 T 31-10-2018 IPR013767 PAS fold GO:0006355 DY252_04630 7f3cc6ff3e8b3bcc34eded3ef57cc668 828 Gene3D G3DSA:3.20.20.450 569 819 2.3E-105 T 31-10-2018 IPR035919 EAL domain superfamily DY252_04630 7f3cc6ff3e8b3bcc34eded3ef57cc668 828 Gene3D G3DSA:3.30.70.270 385 568 1.8E-57 T 31-10-2018 DY252_04630 7f3cc6ff3e8b3bcc34eded3ef57cc668 828 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 258 387 6.2E-13 T 31-10-2018 IPR000014 PAS domain DY252_04630 7f3cc6ff3e8b3bcc34eded3ef57cc668 828 SUPERFAMILY SSF55073 396 557 1.49E-44 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_04630 7f3cc6ff3e8b3bcc34eded3ef57cc668 828 Pfam PF00990 Diguanylate cyclase, GGDEF domain 391 550 1.1E-44 T 31-10-2018 IPR000160 GGDEF domain DY252_04630 7f3cc6ff3e8b3bcc34eded3ef57cc668 828 SUPERFAMILY SSF141868 571 819 5.1E-94 T 31-10-2018 IPR035919 EAL domain superfamily DY252_04630 7f3cc6ff3e8b3bcc34eded3ef57cc668 828 Pfam PF00563 EAL domain 572 807 7.0E-78 T 31-10-2018 IPR001633 EAL domain DY252_07635 2dd940025c675f7218843dd18d068be4 318 Pfam PF08401 Domain of unknown function (DUF1738) 16 141 2.8E-39 T 31-10-2018 IPR013610 Domain of unknown function DUF1738 DY252_07635 2dd940025c675f7218843dd18d068be4 318 PIRSF PIRSF037112 2 315 8.5E-111 T 31-10-2018 IPR017113 Antirestriction, ArdC DY252_19765 0379f957f1a32716440f104158378177 152 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 151 25.355 T 31-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DY252_19765 0379f957f1a32716440f104158378177 152 PIRSF PIRSF004505 1 151 2.3E-41 T 31-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DY252_19765 0379f957f1a32716440f104158378177 152 SUPERFAMILY SSF75217 1 149 3.27E-44 T 31-10-2018 IPR029028 Alpha/beta knot methyltransferases DY252_19765 0379f957f1a32716440f104158378177 152 Pfam PF02590 Predicted SPOUT methyltransferase 1 150 8.9E-44 T 31-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DY252_19765 0379f957f1a32716440f104158378177 152 Gene3D G3DSA:3.40.1280.10 1 151 3.7E-45 T 31-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DY252_05865 c961e25d92b61333ef8c2e17a66339ca 477 Gene3D G3DSA:3.40.190.10 159 461 1.9E-59 T 31-10-2018 DY252_05865 c961e25d92b61333ef8c2e17a66339ca 477 SUPERFAMILY SSF53850 37 470 3.72E-52 T 31-10-2018 DY252_05865 c961e25d92b61333ef8c2e17a66339ca 477 Pfam PF13416 Bacterial extracellular solute-binding protein 58 405 8.2E-24 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_05865 c961e25d92b61333ef8c2e17a66339ca 477 Gene3D G3DSA:3.40.190.10 57 420 1.9E-59 T 31-10-2018 DY252_21175 eacdd5b1453bc84a78c990b1905a3a29 335 Gene3D G3DSA:3.40.50.300 72 274 2.7E-46 T 31-10-2018 DY252_21175 eacdd5b1453bc84a78c990b1905a3a29 335 SUPERFAMILY SSF52540 81 318 5.54E-46 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_21175 eacdd5b1453bc84a78c990b1905a3a29 335 SMART SM00382 119 252 1.9E-15 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_21175 eacdd5b1453bc84a78c990b1905a3a29 335 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 123 249 4.5E-29 T 31-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DY252_20550 7ea5bf0c6c642a79a12b696530d3cd30 260 Pfam PF00005 ABC transporter 25 181 1.1E-28 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_20550 7ea5bf0c6c642a79a12b696530d3cd30 260 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 6 258 7.9E-120 T 31-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK DY252_20550 7ea5bf0c6c642a79a12b696530d3cd30 260 SUPERFAMILY SSF52540 4 256 4.12E-59 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_20550 7ea5bf0c6c642a79a12b696530d3cd30 260 PIRSF PIRSF037116 1 260 2.1E-143 T 31-10-2018 IPR012700 Phosphonate C-P lyase system, PhnK DY252_20550 7ea5bf0c6c642a79a12b696530d3cd30 260 SMART SM00382 33 231 1.4E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_20550 7ea5bf0c6c642a79a12b696530d3cd30 260 Gene3D G3DSA:3.40.50.300 6 260 4.3E-69 T 31-10-2018 DY252_20550 7ea5bf0c6c642a79a12b696530d3cd30 260 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_00215 86bfbba107320ea4eb32d73f5ca404e4 105 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 2 105 32.155 T 31-10-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 DY252_00215 86bfbba107320ea4eb32d73f5ca404e4 105 Pfam PF05336 L-rhamnose mutarotase 4 104 7.7E-27 T 31-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 DY252_00215 86bfbba107320ea4eb32d73f5ca404e4 105 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 5 104 5.6E-34 T 31-10-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 DY252_00215 86bfbba107320ea4eb32d73f5ca404e4 105 SUPERFAMILY SSF54909 2 105 2.95E-37 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_00215 86bfbba107320ea4eb32d73f5ca404e4 105 Gene3D G3DSA:3.30.70.100 1 98 1.3E-37 T 31-10-2018 DY252_09750 2998b25ffafaaf4a964439c006c22440 280 SUPERFAMILY SSF52402 156 279 3.01E-15 T 31-10-2018 DY252_09750 2998b25ffafaaf4a964439c006c22440 280 Gene3D G3DSA:3.40.50.12370 4 279 2.1E-37 T 31-10-2018 DY252_09750 2998b25ffafaaf4a964439c006c22440 280 Pfam PF00582 Universal stress protein family 1 146 1.2E-8 T 31-10-2018 IPR006016 UspA DY252_09750 2998b25ffafaaf4a964439c006c22440 280 Pfam PF00582 Universal stress protein family 229 278 4.1E-9 T 31-10-2018 IPR006016 UspA DY252_09750 2998b25ffafaaf4a964439c006c22440 280 SUPERFAMILY SSF52402 1 146 4.27E-16 T 31-10-2018 DY252_09750 2998b25ffafaaf4a964439c006c22440 280 PRINTS PR01438 Universal stress protein signature 2 20 2.7E-9 T 31-10-2018 IPR006015 Universal stress protein A DY252_09750 2998b25ffafaaf4a964439c006c22440 280 PRINTS PR01438 Universal stress protein signature 258 280 2.7E-9 T 31-10-2018 IPR006015 Universal stress protein A DY252_09750 2998b25ffafaaf4a964439c006c22440 280 PRINTS PR01438 Universal stress protein signature 240 252 2.7E-9 T 31-10-2018 IPR006015 Universal stress protein A DY252_18905 ae2fab7a155417ec171c074d1f9aa0bd 331 Pfam PF02625 XdhC and CoxI family 19 81 4.9E-17 T 31-10-2018 IPR003777 XdhC- CoxI DY252_18905 ae2fab7a155417ec171c074d1f9aa0bd 331 Pfam PF13478 XdhC Rossmann domain 173 313 3.2E-27 T 31-10-2018 IPR027051 XdhC Rossmann domain DY252_18905 ae2fab7a155417ec171c074d1f9aa0bd 331 Gene3D G3DSA:3.40.50.720 172 330 2.1E-32 T 31-10-2018 DY252_15470 e6cb46e31fe7fcab1d082d8b0f449c29 100 PRINTS PR00956 Flagellar motor switch protein FliN signature 53 66 2.4E-23 T 31-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DY252_15470 e6cb46e31fe7fcab1d082d8b0f449c29 100 PRINTS PR00956 Flagellar motor switch protein FliN signature 66 81 2.4E-23 T 31-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DY252_15470 e6cb46e31fe7fcab1d082d8b0f449c29 100 PRINTS PR00956 Flagellar motor switch protein FliN signature 37 53 2.4E-23 T 31-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DY252_15470 e6cb46e31fe7fcab1d082d8b0f449c29 100 PRINTS PR00956 Flagellar motor switch protein FliN signature 20 36 2.4E-23 T 31-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DY252_15470 e6cb46e31fe7fcab1d082d8b0f449c29 100 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 22 90 4.7E-25 T 31-10-2018 IPR001543 Surface presentation of antigen (SpoA) DY252_15470 e6cb46e31fe7fcab1d082d8b0f449c29 100 Gene3D G3DSA:2.30.330.10 9 98 4.9E-30 T 31-10-2018 IPR036429 SpoA-like superfamily DY252_15470 e6cb46e31fe7fcab1d082d8b0f449c29 100 SUPERFAMILY SSF101801 19 92 1.44E-22 T 31-10-2018 IPR036429 SpoA-like superfamily DY252_15470 e6cb46e31fe7fcab1d082d8b0f449c29 100 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 20 92 2.6E-29 T 31-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 DY252_02640 8d8e5fa31e9770d7fcae185d6fd8bc01 230 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 17 215 5.2E-21 T 31-10-2018 IPR003111 Lon, substrate-binding domain DY252_02640 8d8e5fa31e9770d7fcae185d6fd8bc01 230 SMART SM00464 17 216 1.8E-6 T 31-10-2018 IPR003111 Lon, substrate-binding domain DY252_02640 8d8e5fa31e9770d7fcae185d6fd8bc01 230 Gene3D G3DSA:2.30.130.40 10 128 7.2E-27 T 31-10-2018 DY252_02640 8d8e5fa31e9770d7fcae185d6fd8bc01 230 SUPERFAMILY SSF88697 17 215 6.96E-40 T 31-10-2018 IPR015947 PUA-like superfamily DY252_02650 6b4217a585fc5cc2dd3112933ae73db3 172 Pfam PF04073 Aminoacyl-tRNA editing domain 24 149 5.7E-27 T 31-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DY252_02650 6b4217a585fc5cc2dd3112933ae73db3 172 SUPERFAMILY SSF55826 4 162 1.06E-43 T 31-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DY252_02650 6b4217a585fc5cc2dd3112933ae73db3 172 Gene3D G3DSA:3.90.960.10 2 168 2.3E-50 T 31-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DY252_00510 d5dca133dfcb2c4780e6d93c40cd7304 495 Gene3D G3DSA:3.30.565.10 15 204 6.0E-15 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_00510 d5dca133dfcb2c4780e6d93c40cd7304 495 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 155 9.2E-27 T 31-10-2018 DY252_00510 d5dca133dfcb2c4780e6d93c40cd7304 495 SUPERFAMILY SSF55874 19 131 4.45E-15 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_17630 c234403bae6de0a969c6c43f662db49c 122 Gene3D G3DSA:3.30.160.170 29 118 1.0E-8 T 31-10-2018 IPR035924 FlaG-like superfamily DY252_17630 c234403bae6de0a969c6c43f662db49c 122 SUPERFAMILY SSF160214 67 121 2.48E-14 T 31-10-2018 IPR035924 FlaG-like superfamily DY252_17630 c234403bae6de0a969c6c43f662db49c 122 Pfam PF03646 FlaG protein 33 120 2.3E-12 T 31-10-2018 IPR005186 FlaG protein DY252_19830 00274f83d31b55aef6a8c04bcab93c70 175 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 14 167 35.191 T 31-10-2018 IPR022927 RNA pyrophosphohydrolase RppH DY252_19830 00274f83d31b55aef6a8c04bcab93c70 175 Pfam PF00293 NUDIX domain 20 156 1.7E-23 T 31-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DY252_19830 00274f83d31b55aef6a8c04bcab93c70 175 Gene3D G3DSA:3.90.79.10 10 165 2.9E-44 T 31-10-2018 DY252_19830 00274f83d31b55aef6a8c04bcab93c70 175 SUPERFAMILY SSF55811 11 162 2.44E-33 T 31-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DY252_19830 00274f83d31b55aef6a8c04bcab93c70 175 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 31-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DY252_19830 00274f83d31b55aef6a8c04bcab93c70 175 PRINTS PR00502 NUDIX hydrolase family signature 61 76 7.3E-6 T 31-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DY252_19830 00274f83d31b55aef6a8c04bcab93c70 175 PRINTS PR00502 NUDIX hydrolase family signature 47 61 7.3E-6 T 31-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DY252_04710 876512e9fb9917e7f5f275b90f2215e2 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 284 1.5E-13 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_04710 876512e9fb9917e7f5f275b90f2215e2 296 Gene3D G3DSA:1.10.3720.10 8 290 2.1E-48 T 31-10-2018 IPR035906 MetI-like superfamily DY252_04710 876512e9fb9917e7f5f275b90f2215e2 296 SUPERFAMILY SSF161098 8 286 3.83E-51 T 31-10-2018 IPR035906 MetI-like superfamily DY252_21800 d0c43b7a040f0b5ae56aec02b74a375b 170 Pfam PF02623 FliW protein 45 165 7.9E-17 T 31-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 DY252_21800 d0c43b7a040f0b5ae56aec02b74a375b 170 Gene3D G3DSA:2.30.290.10 25 170 2.5E-25 T 31-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily DY252_21800 d0c43b7a040f0b5ae56aec02b74a375b 170 SUPERFAMILY SSF141457 30 161 3.4E-20 T 31-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily DY252_08040 9ec7a914ba9a6fbbe62cea8b6844188b 442 PIRSF PIRSF006429 1 439 2.7E-149 T 31-10-2018 IPR024188 Glutamate synthase large subunit-like protein DY252_08040 9ec7a914ba9a6fbbe62cea8b6844188b 442 Pfam PF01645 Conserved region in glutamate synthase 80 332 7.9E-76 T 31-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 DY252_08040 9ec7a914ba9a6fbbe62cea8b6844188b 442 Pfam PF01645 Conserved region in glutamate synthase 356 404 1.8E-4 T 31-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 DY252_08040 9ec7a914ba9a6fbbe62cea8b6844188b 442 PIRSF PIRSF500061 2 440 5.4E-166 T 31-10-2018 DY252_08040 9ec7a914ba9a6fbbe62cea8b6844188b 442 SUPERFAMILY SSF51395 29 438 1.34E-90 T 31-10-2018 DY252_08040 9ec7a914ba9a6fbbe62cea8b6844188b 442 Gene3D G3DSA:3.20.20.70 63 430 3.4E-97 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_16115 5ffb561d97177105219e4d73dab7fe80 263 Gene3D G3DSA:3.40.50.300 6 249 1.7E-59 T 31-10-2018 DY252_16115 5ffb561d97177105219e4d73dab7fe80 263 Pfam PF00005 ABC transporter 28 169 2.8E-29 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_16115 5ffb561d97177105219e4d73dab7fe80 263 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_16115 5ffb561d97177105219e4d73dab7fe80 263 SUPERFAMILY SSF52540 9 240 3.31E-63 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_16115 5ffb561d97177105219e4d73dab7fe80 263 SMART SM00382 37 220 1.3E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_05980 e154f6074893ed8f95b9d2ee03f2b35d 296 Pfam PF00005 ABC transporter 18 156 1.1E-29 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_05980 e154f6074893ed8f95b9d2ee03f2b35d 296 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_05980 e154f6074893ed8f95b9d2ee03f2b35d 296 Gene3D G3DSA:3.40.50.300 1 229 3.7E-60 T 31-10-2018 DY252_05980 e154f6074893ed8f95b9d2ee03f2b35d 296 SUPERFAMILY SSF52540 3 217 6.33E-58 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_05980 e154f6074893ed8f95b9d2ee03f2b35d 296 SMART SM00382 27 204 3.7E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_07965 8a08eb2727af518c17aa857a579a5f84 268 PIRSF PIRSF015626 4 268 2.9E-64 T 31-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DY252_07965 8a08eb2727af518c17aa857a579a5f84 268 Gene3D G3DSA:3.10.20.10 37 122 8.7E-9 T 31-10-2018 DY252_07965 8a08eb2727af518c17aa857a579a5f84 268 Pfam PF02634 FdhD/NarQ family 37 265 3.6E-59 T 31-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DY252_07965 8a08eb2727af518c17aa857a579a5f84 268 SUPERFAMILY SSF53927 29 267 6.02E-60 T 31-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DY252_07965 8a08eb2727af518c17aa857a579a5f84 268 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 36 261 2.5E-48 T 31-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DY252_07965 8a08eb2727af518c17aa857a579a5f84 268 Gene3D G3DSA:3.40.140.10 124 268 5.2E-35 T 31-10-2018 DY252_08985 b08dff0ef3ec8b786dc03f3dfc06cef1 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.2E-30 T 31-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_08985 b08dff0ef3ec8b786dc03f3dfc06cef1 275 Gene3D G3DSA:2.40.50.140 1 114 1.7E-46 T 31-10-2018 DY252_08985 b08dff0ef3ec8b786dc03f3dfc06cef1 275 SUPERFAMILY SSF50104 126 272 1.81E-61 T 31-10-2018 IPR008991 Translation protein SH3-like domain superfamily DY252_08985 b08dff0ef3ec8b786dc03f3dfc06cef1 275 Gene3D G3DSA:2.30.30.30 118 196 3.1E-32 T 31-10-2018 IPR014722 Ribosomal protein L2, domain 2 DY252_08985 b08dff0ef3ec8b786dc03f3dfc06cef1 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 7.5E-58 T 31-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 DY252_08985 b08dff0ef3ec8b786dc03f3dfc06cef1 275 Gene3D G3DSA:4.10.950.10 197 274 8.3E-37 T 31-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_08985 b08dff0ef3ec8b786dc03f3dfc06cef1 275 SUPERFAMILY SSF50249 2 125 5.48E-47 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_08985 b08dff0ef3ec8b786dc03f3dfc06cef1 275 PIRSF PIRSF002158 4 275 9.0E-102 T 31-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_08985 b08dff0ef3ec8b786dc03f3dfc06cef1 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.769 T 31-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 DY252_08985 b08dff0ef3ec8b786dc03f3dfc06cef1 275 SMART SM01383 42 118 7.3E-43 T 31-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_08985 b08dff0ef3ec8b786dc03f3dfc06cef1 275 SMART SM01382 124 252 4.5E-93 T 31-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 DY252_08985 b08dff0ef3ec8b786dc03f3dfc06cef1 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 3.3E-125 T 31-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 DY252_08985 b08dff0ef3ec8b786dc03f3dfc06cef1 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 31-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_05690 96c65cb0d9f3b17740624398f7834626 211 Pfam PF09684 Phage tail protein (Tail_P2_I) 5 144 2.5E-46 T 31-10-2018 IPR006521 Tail protein I DY252_05690 96c65cb0d9f3b17740624398f7834626 211 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 5 138 1.5E-38 T 31-10-2018 IPR006521 Tail protein I DY252_07290 fc65011da0e16ca0d12fb400d906b06c 258 Pfam PF13763 Domain of unknown function (DUF4167) 7 79 6.9E-25 T 31-10-2018 IPR025430 Domain of unknown function DUF4167 DY252_05170 a9d0a502db0e2684001f79d5bf6350f3 422 Pfam PF00033 Cytochrome b/b6/petB 30 214 7.5E-77 T 31-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DY252_05170 a9d0a502db0e2684001f79d5bf6350f3 422 Gene3D G3DSA:1.20.810.10 3 422 2.0E-166 T 31-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 DY252_05170 a9d0a502db0e2684001f79d5bf6350f3 422 SUPERFAMILY SSF81648 275 407 4.8E-38 T 31-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DY252_05170 a9d0a502db0e2684001f79d5bf6350f3 422 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 272 388 5.7E-39 T 31-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DY252_05170 a9d0a502db0e2684001f79d5bf6350f3 422 SUPERFAMILY SSF81342 12 274 3.77E-111 T 31-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DY252_05170 a9d0a502db0e2684001f79d5bf6350f3 422 PIRSF PIRSF038885 3 419 1.9E-195 T 31-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 DY252_09205 d5e2cf9115d72a2cf527e8799acf76f8 244 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 183 3.0E-8 T 31-10-2018 DY252_09205 d5e2cf9115d72a2cf527e8799acf76f8 244 SUPERFAMILY SSF56784 1 232 6.17E-32 T 31-10-2018 IPR036412 HAD-like superfamily DY252_09205 d5e2cf9115d72a2cf527e8799acf76f8 244 Gene3D G3DSA:3.40.50.1000 3 208 9.3E-71 T 31-10-2018 IPR023214 HAD superfamily DY252_09205 d5e2cf9115d72a2cf527e8799acf76f8 244 Gene3D G3DSA:1.10.150.240 17 97 9.3E-71 T 31-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DY252_10975 852e9c853e2922127794505e07c96238 241 SUPERFAMILY SSF101852 155 239 5.49E-15 T 31-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal DY252_10975 852e9c853e2922127794505e07c96238 241 Gene3D G3DSA:2.40.30.90 158 240 7.9E-20 T 31-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal DY252_10975 852e9c853e2922127794505e07c96238 241 SUPERFAMILY SSF102522 1 143 1.57E-41 T 31-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal DY252_10975 852e9c853e2922127794505e07c96238 241 PIRSF PIRSF006779 1 241 2.4E-48 T 31-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase DY252_10975 852e9c853e2922127794505e07c96238 241 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 2 238 1.2E-60 T 31-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase DY252_10975 852e9c853e2922127794505e07c96238 241 Gene3D G3DSA:3.40.50.10790 1 148 2.1E-42 T 31-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal DY252_10290 06b0ca33dfb530a50d94ba6dd35b1bcf 435 Gene3D G3DSA:3.40.640.10 61 324 7.2E-146 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_10290 06b0ca33dfb530a50d94ba6dd35b1bcf 435 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 240 277 - T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_10290 06b0ca33dfb530a50d94ba6dd35b1bcf 435 Gene3D G3DSA:3.90.1150.10 32 424 7.2E-146 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_10290 06b0ca33dfb530a50d94ba6dd35b1bcf 435 SUPERFAMILY SSF53383 6 431 1.22E-120 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_10290 06b0ca33dfb530a50d94ba6dd35b1bcf 435 Pfam PF00202 Aminotransferase class-III 27 428 5.6E-95 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_10290 06b0ca33dfb530a50d94ba6dd35b1bcf 435 PIRSF PIRSF000521 122 432 2.5E-31 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_10290 06b0ca33dfb530a50d94ba6dd35b1bcf 435 PIRSF PIRSF000521 26 129 2.9E-9 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_08235 249b42497dd65359e3a4ec8025984d83 233 Gene3D G3DSA:1.20.1050.10 91 231 2.5E-50 T 31-10-2018 DY252_08235 249b42497dd65359e3a4ec8025984d83 233 SUPERFAMILY SSF52833 1 84 7.18E-23 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_08235 249b42497dd65359e3a4ec8025984d83 233 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 81 1.5E-15 T 31-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DY252_08235 249b42497dd65359e3a4ec8025984d83 233 Pfam PF00043 Glutathione S-transferase, C-terminal domain 135 197 7.4E-12 T 31-10-2018 IPR004046 Glutathione S-transferase, C-terminal DY252_08235 249b42497dd65359e3a4ec8025984d83 233 SUPERFAMILY SSF47616 78 204 3.27E-37 T 31-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DY252_08235 249b42497dd65359e3a4ec8025984d83 233 Gene3D G3DSA:3.40.30.10 1 90 5.8E-31 T 31-10-2018 DY252_10015 5c092da29c1fa2d5dd0d755113e9bbae 335 SUPERFAMILY SSF55347 153 315 4.46E-73 T 31-10-2018 DY252_10015 5c092da29c1fa2d5dd0d755113e9bbae 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 1.4E-39 T 31-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_10015 5c092da29c1fa2d5dd0d755113e9bbae 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 1.4E-39 T 31-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_10015 5c092da29c1fa2d5dd0d755113e9bbae 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 1.4E-39 T 31-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_10015 5c092da29c1fa2d5dd0d755113e9bbae 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 1.4E-39 T 31-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_10015 5c092da29c1fa2d5dd0d755113e9bbae 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 1.4E-39 T 31-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_10015 5c092da29c1fa2d5dd0d755113e9bbae 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 31-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_10015 5c092da29c1fa2d5dd0d755113e9bbae 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 8.6E-134 T 31-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_10015 5c092da29c1fa2d5dd0d755113e9bbae 335 Gene3D G3DSA:3.30.360.10 152 316 7.5E-150 T 31-10-2018 DY252_10015 5c092da29c1fa2d5dd0d755113e9bbae 335 SMART SM00846 3 153 2.9E-93 T 31-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_10015 5c092da29c1fa2d5dd0d755113e9bbae 335 SUPERFAMILY SSF51735 1 173 9.52E-62 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_10015 5c092da29c1fa2d5dd0d755113e9bbae 335 PIRSF PIRSF000149 1 335 4.6E-138 T 31-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_10015 5c092da29c1fa2d5dd0d755113e9bbae 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 3.8E-38 T 31-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_10015 5c092da29c1fa2d5dd0d755113e9bbae 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 314 5.1E-68 T 31-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DY252_10015 5c092da29c1fa2d5dd0d755113e9bbae 335 Gene3D G3DSA:3.40.50.720 4 326 7.5E-150 T 31-10-2018 DY252_06350 0d8adcc81ff4cfb1b70291aae4ab43d9 785 Pfam PF13361 UvrD-like helicase C-terminal domain 301 631 7.7E-63 T 31-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DY252_06350 0d8adcc81ff4cfb1b70291aae4ab43d9 785 Gene3D G3DSA:1.10.10.160 138 214 8.8E-96 T 31-10-2018 IPR013986 DExx box DNA helicase domain superfamily DY252_06350 0d8adcc81ff4cfb1b70291aae4ab43d9 785 Pfam PF00580 UvrD/REP helicase N-terminal domain 30 295 3.9E-74 T 31-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DY252_06350 0d8adcc81ff4cfb1b70291aae4ab43d9 785 Gene3D G3DSA:1.10.486.10 406 553 3.0E-110 T 31-10-2018 DY252_06350 0d8adcc81ff4cfb1b70291aae4ab43d9 785 Gene3D G3DSA:3.40.50.300 305 652 3.0E-110 T 31-10-2018 DY252_06350 0d8adcc81ff4cfb1b70291aae4ab43d9 785 Gene3D G3DSA:3.40.50.300 30 298 8.8E-96 T 31-10-2018 DY252_06350 0d8adcc81ff4cfb1b70291aae4ab43d9 785 SUPERFAMILY SSF52540 23 658 2.66E-177 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18390 8923ea74d0d83697dbb14d6fd5be1726 311 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 36 308 59.946 T 31-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 DY252_18390 8923ea74d0d83697dbb14d6fd5be1726 311 SUPERFAMILY SSF52540 103 306 9.18E-52 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18390 8923ea74d0d83697dbb14d6fd5be1726 311 Pfam PF02881 SRP54-type protein, helical bundle domain 24 87 2.0E-8 T 31-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DY252_18390 8923ea74d0d83697dbb14d6fd5be1726 311 SMART SM00962 107 308 1.1E-113 T 31-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DY252_18390 8923ea74d0d83697dbb14d6fd5be1726 311 SMART SM00963 13 92 9.7E-15 T 31-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DY252_18390 8923ea74d0d83697dbb14d6fd5be1726 311 Gene3D G3DSA:3.40.50.300 107 296 1.6E-112 T 31-10-2018 DY252_18390 8923ea74d0d83697dbb14d6fd5be1726 311 SMART SM00382 106 264 1.6E-10 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_18390 8923ea74d0d83697dbb14d6fd5be1726 311 Gene3D G3DSA:1.20.120.140 10 306 1.6E-112 T 31-10-2018 DY252_18390 8923ea74d0d83697dbb14d6fd5be1726 311 Pfam PF00448 SRP54-type protein, GTPase domain 107 306 5.5E-75 T 31-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DY252_18390 8923ea74d0d83697dbb14d6fd5be1726 311 SUPERFAMILY SSF47364 8 85 7.33E-19 T 31-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 DY252_18390 8923ea74d0d83697dbb14d6fd5be1726 311 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 37 306 2.1E-102 T 31-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 DY252_07980 1ec204e8772616b24ac726bd7aaea0a2 577 SUPERFAMILY SSF143975 4 377 3.79E-122 T 31-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DY252_07980 1ec204e8772616b24ac726bd7aaea0a2 577 SUPERFAMILY SSF52016 379 563 1.18E-57 T 31-10-2018 DY252_07980 1ec204e8772616b24ac726bd7aaea0a2 577 Pfam PF00920 Dehydratase family 42 558 9.0E-176 T 31-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DY252_07980 1ec204e8772616b24ac726bd7aaea0a2 577 Gene3D G3DSA:3.50.30.80 378 532 4.1E-47 T 31-10-2018 DY252_07980 1ec204e8772616b24ac726bd7aaea0a2 577 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 125 135 - T 31-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DY252_07555 c0b001f33bffa617a7ff6c7c97f3aefe 350 SUPERFAMILY SSF52540 3 246 1.66E-84 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07555 c0b001f33bffa617a7ff6c7c97f3aefe 350 Pfam PF08402 TOBE domain 274 344 1.0E-5 T 31-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DY252_07555 c0b001f33bffa617a7ff6c7c97f3aefe 350 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 7.9E-109 T 31-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 DY252_07555 c0b001f33bffa617a7ff6c7c97f3aefe 350 Gene3D G3DSA:3.40.50.300 2 267 4.1E-80 T 31-10-2018 DY252_07555 c0b001f33bffa617a7ff6c7c97f3aefe 350 SMART SM00382 27 214 1.3E-21 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_07555 c0b001f33bffa617a7ff6c7c97f3aefe 350 SUPERFAMILY SSF50331 239 346 4.76E-8 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_07555 c0b001f33bffa617a7ff6c7c97f3aefe 350 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_07555 c0b001f33bffa617a7ff6c7c97f3aefe 350 Pfam PF00005 ABC transporter 18 164 7.9E-33 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_18505 8fb469600e7364d91cec5c014f90458e 282 SUPERFAMILY SSF103088 167 277 7.98E-18 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_18505 8fb469600e7364d91cec5c014f90458e 282 Gene3D G3DSA:3.30.1330.60 158 280 2.5E-16 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_18505 8fb469600e7364d91cec5c014f90458e 282 Pfam PF00691 OmpA family 177 265 1.2E-10 T 31-10-2018 IPR006665 OmpA-like domain DY252_18505 8fb469600e7364d91cec5c014f90458e 282 PRINTS PR01021 OMPA domain signature 178 200 2.7E-5 T 31-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DY252_18505 8fb469600e7364d91cec5c014f90458e 282 PRINTS PR01021 OMPA domain signature 223 239 2.7E-5 T 31-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DY252_18505 8fb469600e7364d91cec5c014f90458e 282 PRINTS PR01021 OMPA domain signature 208 223 2.7E-5 T 31-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DY252_18705 459227033d5d0b3445b65e0075192624 154 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 1 130 3.3E-23 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_20170 a1470edd3d839450ae77429167dd8816 408 Pfam PF07690 Major Facilitator Superfamily 15 364 5.2E-11 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_20170 a1470edd3d839450ae77429167dd8816 408 Gene3D G3DSA:1.20.1250.20 7 398 1.1E-16 T 31-10-2018 DY252_20170 a1470edd3d839450ae77429167dd8816 408 SUPERFAMILY SSF103473 6 400 8.5E-21 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_20750 2ae0f141a570b092f444fbef88878ca2 1093 SUPERFAMILY SSF48403 394 605 3.57E-36 T 31-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily DY252_20750 2ae0f141a570b092f444fbef88878ca2 1093 Gene3D G3DSA:1.25.40.20 305 617 1.2E-39 T 31-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily DY252_20750 2ae0f141a570b092f444fbef88878ca2 1093 Pfam PF13637 Ankyrin repeats (many copies) 768 819 2.4E-6 T 31-10-2018 DY252_20750 2ae0f141a570b092f444fbef88878ca2 1093 Gene3D G3DSA:1.25.40.20 669 931 2.3E-27 T 31-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily DY252_20750 2ae0f141a570b092f444fbef88878ca2 1093 Pfam PF12796 Ankyrin repeats (3 copies) 495 573 1.0E-9 T 31-10-2018 IPR020683 Ankyrin repeat-containing domain DY252_20750 2ae0f141a570b092f444fbef88878ca2 1093 Pfam PF12796 Ankyrin repeats (3 copies) 404 482 1.5E-10 T 31-10-2018 IPR020683 Ankyrin repeat-containing domain DY252_20750 2ae0f141a570b092f444fbef88878ca2 1093 SMART SM00248 799 828 0.069 T 31-10-2018 IPR002110 Ankyrin repeat GO:0005515 DY252_20750 2ae0f141a570b092f444fbef88878ca2 1093 SMART SM00248 488 517 47.0 T 31-10-2018 IPR002110 Ankyrin repeat GO:0005515 DY252_20750 2ae0f141a570b092f444fbef88878ca2 1093 SMART SM00248 349 378 1100.0 T 31-10-2018 IPR002110 Ankyrin repeat GO:0005515 DY252_20750 2ae0f141a570b092f444fbef88878ca2 1093 SMART SM00248 422 451 240.0 T 31-10-2018 IPR002110 Ankyrin repeat GO:0005515 DY252_20750 2ae0f141a570b092f444fbef88878ca2 1093 SMART SM00248 835 864 3.7 T 31-10-2018 IPR002110 Ankyrin repeat GO:0005515 DY252_20750 2ae0f141a570b092f444fbef88878ca2 1093 SMART SM00248 521 550 0.0031 T 31-10-2018 IPR002110 Ankyrin repeat GO:0005515 DY252_20750 2ae0f141a570b092f444fbef88878ca2 1093 SMART SM00248 766 795 3.2E-4 T 31-10-2018 IPR002110 Ankyrin repeat GO:0005515 DY252_20750 2ae0f141a570b092f444fbef88878ca2 1093 SMART SM00248 455 485 0.011 T 31-10-2018 IPR002110 Ankyrin repeat GO:0005515 DY252_20750 2ae0f141a570b092f444fbef88878ca2 1093 SUPERFAMILY SSF48403 559 874 2.93E-26 T 31-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily DY252_07640 b67f43c8af86a340aa1f2242018191a8 174 Pfam PF00565 Staphylococcal nuclease homologue 51 157 2.5E-9 T 31-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 DY252_07640 b67f43c8af86a340aa1f2242018191a8 174 SMART SM00318 32 158 1.4E-10 T 31-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 DY252_07640 b67f43c8af86a340aa1f2242018191a8 174 SUPERFAMILY SSF50199 37 161 4.18E-26 T 31-10-2018 DY252_07640 b67f43c8af86a340aa1f2242018191a8 174 Gene3D G3DSA:2.40.50.90 36 162 3.8E-20 T 31-10-2018 IPR035437 SNase-like, OB-fold superfamily DY252_04985 10cbfe26ed7b1c52beceefb311768c2e 477 SUPERFAMILY SSF53756 107 441 1.41E-10 T 31-10-2018 DY252_04985 10cbfe26ed7b1c52beceefb311768c2e 477 Gene3D G3DSA:3.40.50.2000 30 224 5.3E-5 T 31-10-2018 DY252_02020 6830a03fe7a9605b7302f9dce98f9691 308 Gene3D G3DSA:3.90.226.10 25 286 5.2E-79 T 31-10-2018 DY252_02020 6830a03fe7a9605b7302f9dce98f9691 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.116 T 31-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DY252_02020 6830a03fe7a9605b7302f9dce98f9691 308 Pfam PF01039 Carboxyl transferase domain 87 242 8.4E-16 T 31-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 DY252_02020 6830a03fe7a9605b7302f9dce98f9691 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 6.3E-116 T 31-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DY252_02020 6830a03fe7a9605b7302f9dce98f9691 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 2.7E-39 T 31-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DY252_02020 6830a03fe7a9605b7302f9dce98f9691 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 2.7E-39 T 31-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DY252_02020 6830a03fe7a9605b7302f9dce98f9691 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 2.7E-39 T 31-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DY252_02020 6830a03fe7a9605b7302f9dce98f9691 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 2.7E-39 T 31-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DY252_02020 6830a03fe7a9605b7302f9dce98f9691 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 2.7E-39 T 31-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DY252_02020 6830a03fe7a9605b7302f9dce98f9691 308 SUPERFAMILY SSF52096 25 280 7.74E-79 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_07440 9b04c8a27c9146ed25b8c3598cc07032 190 Pfam PF13420 Acetyltransferase (GNAT) domain 20 174 5.4E-27 T 31-10-2018 DY252_07440 9b04c8a27c9146ed25b8c3598cc07032 190 Gene3D G3DSA:3.40.630.30 17 187 7.2E-53 T 31-10-2018 DY252_07440 9b04c8a27c9146ed25b8c3598cc07032 190 SUPERFAMILY SSF55729 18 181 2.23E-32 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_04835 31afa5525d0a2fde9fecc835c290ce84 945 SUPERFAMILY SSF52374 3 663 4.12E-141 T 31-10-2018 DY252_04835 31afa5525d0a2fde9fecc835c290ce84 945 Pfam PF06827 Zinc finger found in FPG and IleRS 907 935 3.4E-8 T 31-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 DY252_04835 31afa5525d0a2fde9fecc835c290ce84 945 Gene3D G3DSA:3.90.740.10 199 424 1.2E-234 T 31-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DY252_04835 31afa5525d0a2fde9fecc835c290ce84 945 SUPERFAMILY SSF47323 668 939 5.01E-63 T 31-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_04835 31afa5525d0a2fde9fecc835c290ce84 945 Gene3D G3DSA:3.40.50.620 26 645 1.2E-234 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_04835 31afa5525d0a2fde9fecc835c290ce84 945 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 31-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_04835 31afa5525d0a2fde9fecc835c290ce84 945 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 29 657 4.7E-197 T 31-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_04835 31afa5525d0a2fde9fecc835c290ce84 945 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 3 938 20.469 T 31-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 DY252_04835 31afa5525d0a2fde9fecc835c290ce84 945 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 16 854 2.6E-268 T 31-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DY252_04835 31afa5525d0a2fde9fecc835c290ce84 945 SUPERFAMILY SSF50677 207 419 2.41E-48 T 31-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DY252_04835 31afa5525d0a2fde9fecc835c290ce84 945 Gene3D G3DSA:1.10.730.20 656 940 6.2E-84 T 31-10-2018 DY252_04835 31afa5525d0a2fde9fecc835c290ce84 945 Pfam PF08264 Anticodon-binding domain of tRNA 700 849 1.5E-20 T 31-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DY252_04835 31afa5525d0a2fde9fecc835c290ce84 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 543 556 4.7E-30 T 31-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DY252_04835 31afa5525d0a2fde9fecc835c290ce84 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 577 586 4.7E-30 T 31-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DY252_04835 31afa5525d0a2fde9fecc835c290ce84 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 4.7E-30 T 31-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DY252_04835 31afa5525d0a2fde9fecc835c290ce84 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 417 432 4.7E-30 T 31-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DY252_04835 31afa5525d0a2fde9fecc835c290ce84 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 234 257 4.7E-30 T 31-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DY252_20250 7a87ad6c49632c821dc1981feab3ab4b 218 Gene3D G3DSA:3.20.20.70 1 217 4.5E-87 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_20250 7a87ad6c49632c821dc1981feab3ab4b 218 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 212 1.2E-60 T 31-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DY252_20250 7a87ad6c49632c821dc1981feab3ab4b 218 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 9.5E-89 T 31-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 DY252_20250 7a87ad6c49632c821dc1981feab3ab4b 218 SUPERFAMILY SSF51569 1 216 4.71E-78 T 31-10-2018 DY252_20250 7a87ad6c49632c821dc1981feab3ab4b 218 ProSitePatterns PS00958 Transaldolase active site. 80 97 - T 31-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DY252_20250 7a87ad6c49632c821dc1981feab3ab4b 218 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 31-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DY252_20250 7a87ad6c49632c821dc1981feab3ab4b 218 Hamap MF_00494 Probable transaldolase [tal]. 1 215 45.866 T 31-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 DY252_08100 5113736363b1ef84053641bc76078dcc 416 Pfam PF01266 FAD dependent oxidoreductase 33 379 2.9E-54 T 31-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DY252_08100 5113736363b1ef84053641bc76078dcc 416 SUPERFAMILY SSF54373 270 337 2.94E-6 T 31-10-2018 DY252_08100 5113736363b1ef84053641bc76078dcc 416 TIGRFAM TIGR01373 soxB: sarcosine oxidase, beta subunit family 2 406 1.3E-213 T 31-10-2018 IPR006278 Sarcosine oxidase subunit beta GO:0008115|GO:0046653|GO:0055114 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DY252_08100 5113736363b1ef84053641bc76078dcc 416 Gene3D G3DSA:3.30.9.10 114 344 1.2E-98 T 31-10-2018 DY252_08100 5113736363b1ef84053641bc76078dcc 416 Gene3D G3DSA:3.50.50.60 33 388 1.2E-98 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_08100 5113736363b1ef84053641bc76078dcc 416 SUPERFAMILY SSF51905 31 402 2.51E-52 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_13905 a5cec4ba940c706ba879ac830cf2af5a 137 Gene3D G3DSA:3.90.190.10 1 136 6.6E-41 T 31-10-2018 IPR029021 Protein-tyrosine phosphatase-like DY252_13905 a5cec4ba940c706ba879ac830cf2af5a 137 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 2 132 6.3E-44 T 31-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 DY252_13905 a5cec4ba940c706ba879ac830cf2af5a 137 Pfam PF04273 Putative phosphatase (DUF442) 1 107 4.1E-35 T 31-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 DY252_07905 33a0aed06d24d267e31e6defa6ea4052 439 Gene3D G3DSA:3.90.1150.10 24 430 1.1E-139 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_07905 33a0aed06d24d267e31e6defa6ea4052 439 Pfam PF00202 Aminotransferase class-III 28 435 4.5E-88 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_07905 33a0aed06d24d267e31e6defa6ea4052 439 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 248 285 - T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_07905 33a0aed06d24d267e31e6defa6ea4052 439 Gene3D G3DSA:3.40.640.10 61 342 1.1E-139 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_07905 33a0aed06d24d267e31e6defa6ea4052 439 SUPERFAMILY SSF53383 11 435 1.88E-116 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_04665 a9bb135e4f23ae6eb66da403d43a6b8f 174 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 108 167 1.0E-14 T 31-10-2018 IPR018550 Lipid A 3-O-deacylase-related DY252_04665 a9bb135e4f23ae6eb66da403d43a6b8f 174 Gene3D G3DSA:2.40.160.20 83 169 9.7E-12 T 31-10-2018 DY252_00935 e293293e30c114a042d9864dc24d8c71 253 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 31-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DY252_00935 e293293e30c114a042d9864dc24d8c71 253 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 249 2.3E-96 T 31-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 DY252_00935 e293293e30c114a042d9864dc24d8c71 253 Gene3D G3DSA:3.30.950.10 111 230 6.0E-42 T 31-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DY252_00935 e293293e30c114a042d9864dc24d8c71 253 Gene3D G3DSA:3.40.1010.10 1 110 2.9E-30 T 31-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DY252_00935 e293293e30c114a042d9864dc24d8c71 253 SUPERFAMILY SSF53790 2 233 1.96E-64 T 31-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DY252_00935 e293293e30c114a042d9864dc24d8c71 253 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 208 1.2E-43 T 31-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DY252_19700 cc7c29291e354ad017120e0c0606673f 429 Gene3D G3DSA:3.20.20.140 54 361 1.7E-152 T 31-10-2018 DY252_19700 cc7c29291e354ad017120e0c0606673f 429 SUPERFAMILY SSF51556 53 372 6.35E-105 T 31-10-2018 IPR032466 Metal-dependent hydrolase DY252_19700 cc7c29291e354ad017120e0c0606673f 429 SUPERFAMILY SSF51338 2 408 4.78E-16 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_19700 cc7c29291e354ad017120e0c0606673f 429 Pfam PF07969 Amidohydrolase family 41 400 2.5E-47 T 31-10-2018 IPR013108 Amidohydrolase 3 DY252_19700 cc7c29291e354ad017120e0c0606673f 429 Gene3D G3DSA:2.30.40.10 9 405 1.7E-152 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_01305 c2325a5cfdba172bd29237031dae2515 112 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 8 94 20.08 T 31-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 DY252_01305 c2325a5cfdba172bd29237031dae2515 112 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 11 94 4.8E-32 T 31-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 DY252_01305 c2325a5cfdba172bd29237031dae2515 112 Gene3D G3DSA:1.10.287.1080 8 100 2.0E-30 T 31-10-2018 DY252_01305 c2325a5cfdba172bd29237031dae2515 112 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 13 97 3.4E-17 T 31-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 DY252_01305 c2325a5cfdba172bd29237031dae2515 112 SUPERFAMILY SSF101386 10 98 7.63E-25 T 31-10-2018 DY252_06740 512c9ceed2f98003053a3d2babad2625 288 Pfam PF03781 Sulfatase-modifying factor enzyme 1 34 286 1.8E-43 T 31-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 DY252_06740 512c9ceed2f98003053a3d2babad2625 288 SUPERFAMILY SSF56436 34 287 3.3E-48 T 31-10-2018 IPR016187 C-type lectin fold DY252_06740 512c9ceed2f98003053a3d2babad2625 288 Gene3D G3DSA:3.90.1580.10 24 288 4.3E-44 T 31-10-2018 DY252_21860 1fb0210cf74aa6e1ee2dc13e8ab2dcfc 91 Pfam PF00381 PTS HPr component phosphorylation site 6 85 9.6E-28 T 31-10-2018 IPR000032 Phosphocarrier protein HPr-like DY252_21860 1fb0210cf74aa6e1ee2dc13e8ab2dcfc 91 PRINTS PR00107 Phosphocarrier protein signature 41 56 5.5E-12 T 31-10-2018 IPR000032 Phosphocarrier protein HPr-like DY252_21860 1fb0210cf74aa6e1ee2dc13e8ab2dcfc 91 PRINTS PR00107 Phosphocarrier protein signature 16 32 5.5E-12 T 31-10-2018 IPR000032 Phosphocarrier protein HPr-like DY252_21860 1fb0210cf74aa6e1ee2dc13e8ab2dcfc 91 PRINTS PR00107 Phosphocarrier protein signature 56 73 5.5E-12 T 31-10-2018 IPR000032 Phosphocarrier protein HPr-like DY252_21860 1fb0210cf74aa6e1ee2dc13e8ab2dcfc 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 6 84 1.3E-28 T 31-10-2018 IPR000032 Phosphocarrier protein HPr-like DY252_21860 1fb0210cf74aa6e1ee2dc13e8ab2dcfc 91 Gene3D G3DSA:3.30.1340.10 4 91 2.8E-31 T 31-10-2018 IPR035895 HPr-like superfamily DY252_21860 1fb0210cf74aa6e1ee2dc13e8ab2dcfc 91 SUPERFAMILY SSF55594 6 91 3.14E-27 T 31-10-2018 IPR035895 HPr-like superfamily DY252_21860 1fb0210cf74aa6e1ee2dc13e8ab2dcfc 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 16 23 - T 31-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DY252_18735 95a5385fa90891b78e968f2a1bf8b032 332 Gene3D G3DSA:3.40.630.10 2 331 6.7E-118 T 31-10-2018 DY252_18735 95a5385fa90891b78e968f2a1bf8b032 332 TIGRFAM TIGR02994 ectoine_eutE: ectoine utilization protein EutE 3 329 5.8E-170 T 31-10-2018 IPR014336 N-alpha-acetyl diaminobutyrate deacetylase DoeB KEGG: 00260+3.5.1.125|MetaCyc: PWY-7855 DY252_18735 95a5385fa90891b78e968f2a1bf8b032 332 PIRSF PIRSF039012 2 332 1.0E-89 T 31-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 DY252_18735 95a5385fa90891b78e968f2a1bf8b032 332 SUPERFAMILY SSF53187 10 329 1.32E-56 T 31-10-2018 DY252_18735 95a5385fa90891b78e968f2a1bf8b032 332 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 48 329 5.8E-76 T 31-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 DY252_18865 518fc8cd24decfc356b3239574cc3858 409 Gene3D G3DSA:1.10.3720.10 130 400 5.0E-52 T 31-10-2018 IPR035906 MetI-like superfamily DY252_18865 518fc8cd24decfc356b3239574cc3858 409 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 223 402 5.0E-21 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_18865 518fc8cd24decfc356b3239574cc3858 409 SUPERFAMILY SSF161098 137 409 2.22E-62 T 31-10-2018 IPR035906 MetI-like superfamily DY252_01440 2d76689a4b6cb4ecdd6090e98e6615b7 314 Hamap MF_00162 Glutathione synthetase [gshB]. 1 314 150.269 T 31-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DY252_01440 2d76689a4b6cb4ecdd6090e98e6615b7 314 TIGRFAM TIGR01380 glut_syn: glutathione synthase 5 311 7.7E-120 T 31-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DY252_01440 2d76689a4b6cb4ecdd6090e98e6615b7 314 SUPERFAMILY SSF52440 5 123 3.45E-35 T 31-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DY252_01440 2d76689a4b6cb4ecdd6090e98e6615b7 314 SUPERFAMILY SSF56059 125 312 2.95E-56 T 31-10-2018 DY252_01440 2d76689a4b6cb4ecdd6090e98e6615b7 314 Gene3D G3DSA:3.30.1490.20 138 202 2.6E-107 T 31-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DY252_01440 2d76689a4b6cb4ecdd6090e98e6615b7 314 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 296 1.1E-72 T 31-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DY252_01440 2d76689a4b6cb4ecdd6090e98e6615b7 314 Gene3D G3DSA:3.40.50.20 9 115 2.6E-107 T 31-10-2018 DY252_01440 2d76689a4b6cb4ecdd6090e98e6615b7 314 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 5 121 9.9E-37 T 31-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DY252_01440 2d76689a4b6cb4ecdd6090e98e6615b7 314 Gene3D G3DSA:3.30.470.20 116 295 2.6E-107 T 31-10-2018 DY252_10490 e6f653a258d616ab76f39e183e6f0920 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.8E-21 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_10490 e6f653a258d616ab76f39e183e6f0920 284 SUPERFAMILY SSF53850 90 283 2.99E-23 T 31-10-2018 DY252_10490 e6f653a258d616ab76f39e183e6f0920 284 Gene3D G3DSA:3.40.190.10 162 255 9.9E-45 T 31-10-2018 DY252_10490 e6f653a258d616ab76f39e183e6f0920 284 Pfam PF03466 LysR substrate binding domain 89 266 4.1E-22 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_10490 e6f653a258d616ab76f39e183e6f0920 284 SUPERFAMILY SSF46785 4 108 2.42E-24 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_10490 e6f653a258d616ab76f39e183e6f0920 284 Gene3D G3DSA:1.10.10.10 1 86 1.7E-27 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_10490 e6f653a258d616ab76f39e183e6f0920 284 Gene3D G3DSA:3.40.190.10 96 261 9.9E-45 T 31-10-2018 DY252_10490 e6f653a258d616ab76f39e183e6f0920 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.1E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_10490 e6f653a258d616ab76f39e183e6f0920 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.1E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_10490 e6f653a258d616ab76f39e183e6f0920 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.1E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_06480 0c11f612c10d82f666a908a07ac52e4a 362 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 70 80 1.5E-4 T 31-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_06480 0c11f612c10d82f666a908a07ac52e4a 362 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 39 362 1.3E-132 T 31-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_06480 0c11f612c10d82f666a908a07ac52e4a 362 ProSitePatterns PS01347 MraY family signature 1. 70 82 - T 31-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_06480 0c11f612c10d82f666a908a07ac52e4a 362 Pfam PF00953 Glycosyl transferase family 4 101 286 2.5E-36 T 31-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 DY252_06480 0c11f612c10d82f666a908a07ac52e4a 362 ProSitePatterns PS01348 MraY family signature 2. 191 202 - T 31-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_06480 0c11f612c10d82f666a908a07ac52e4a 362 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 360 25.357 T 31-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_02645 eecf1a8c09502007e563f4cf69b78e54 308 SUPERFAMILY SSF48452 137 270 2.05E-7 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_02645 eecf1a8c09502007e563f4cf69b78e54 308 SUPERFAMILY SSF52833 21 128 1.03E-32 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_02645 eecf1a8c09502007e563f4cf69b78e54 308 ProSitePatterns PS00194 Thioredoxin family active site. 45 63 - T 31-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DY252_02645 eecf1a8c09502007e563f4cf69b78e54 308 Gene3D G3DSA:3.40.30.10 24 129 7.7E-30 T 31-10-2018 DY252_02645 eecf1a8c09502007e563f4cf69b78e54 308 Gene3D G3DSA:1.25.40.10 222 307 1.7E-21 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_02645 eecf1a8c09502007e563f4cf69b78e54 308 Gene3D G3DSA:1.25.40.10 133 219 2.5E-5 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_02645 eecf1a8c09502007e563f4cf69b78e54 308 PRINTS PR00421 Thioredoxin family signature 92 103 7.0E-7 T 31-10-2018 DY252_02645 eecf1a8c09502007e563f4cf69b78e54 308 PRINTS PR00421 Thioredoxin family signature 44 52 7.0E-7 T 31-10-2018 DY252_02645 eecf1a8c09502007e563f4cf69b78e54 308 PRINTS PR00421 Thioredoxin family signature 52 61 7.0E-7 T 31-10-2018 DY252_02645 eecf1a8c09502007e563f4cf69b78e54 308 Pfam PF14561 Tetratricopeptide repeat 222 307 3.4E-25 T 31-10-2018 DY252_02645 eecf1a8c09502007e563f4cf69b78e54 308 TIGRFAM TIGR01068 thioredoxin: thioredoxin 40 125 3.6E-30 T 31-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DY252_02645 eecf1a8c09502007e563f4cf69b78e54 308 Pfam PF00085 Thioredoxin 28 125 6.2E-26 T 31-10-2018 IPR013766 Thioredoxin domain GO:0045454 DY252_18975 15305a2f78a62ce4417d834240d78239 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 9.6E-7 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_18975 15305a2f78a62ce4417d834240d78239 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 9.6E-7 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_18975 15305a2f78a62ce4417d834240d78239 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 9.6E-7 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_18975 15305a2f78a62ce4417d834240d78239 142 SMART SM00347 29 128 2.2E-12 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_18975 15305a2f78a62ce4417d834240d78239 142 Pfam PF01047 MarR family 37 93 1.9E-11 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_18975 15305a2f78a62ce4417d834240d78239 142 SUPERFAMILY SSF46785 4 141 8.95E-26 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_18975 15305a2f78a62ce4417d834240d78239 142 Gene3D G3DSA:1.10.10.10 1 141 8.3E-31 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_12350 844e7097c5a07ec3ed71519c3f7dfe08 306 PIRSF PIRSF001357 50 298 1.4E-61 T 31-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DY252_12350 844e7097c5a07ec3ed71519c3f7dfe08 306 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 58 273 4.4E-53 T 31-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DY252_12350 844e7097c5a07ec3ed71519c3f7dfe08 306 Gene3D G3DSA:3.20.20.70 48 293 1.2E-76 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_12350 844e7097c5a07ec3ed71519c3f7dfe08 306 SUPERFAMILY SSF51569 53 290 2.83E-64 T 31-10-2018 DY252_12350 844e7097c5a07ec3ed71519c3f7dfe08 306 Pfam PF01791 DeoC/LacD family aldolase 58 261 2.2E-24 T 31-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DY252_12350 844e7097c5a07ec3ed71519c3f7dfe08 306 SMART SM01133 56 290 5.7E-50 T 31-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DY252_21730 fc31edb8d9a1c4032d3996c2e2a4e5fe 308 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 141 172 6.1E-9 T 31-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 DY252_21730 fc31edb8d9a1c4032d3996c2e2a4e5fe 308 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 36 137 3.0E-12 T 31-10-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 DY252_21730 fc31edb8d9a1c4032d3996c2e2a4e5fe 308 Pfam PF00293 NUDIX domain 177 282 2.0E-16 T 31-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DY252_21730 fc31edb8d9a1c4032d3996c2e2a4e5fe 308 SUPERFAMILY SSF55811 123 306 2.03E-45 T 31-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DY252_21730 fc31edb8d9a1c4032d3996c2e2a4e5fe 308 Gene3D G3DSA:3.90.79.10 175 307 1.6E-37 T 31-10-2018 DY252_21730 fc31edb8d9a1c4032d3996c2e2a4e5fe 308 ProSitePatterns PS00893 Nudix box signature. 207 228 - T 31-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DY252_21730 fc31edb8d9a1c4032d3996c2e2a4e5fe 308 Gene3D G3DSA:3.90.79.20 51 173 1.6E-10 T 31-10-2018 DY252_05460 cb3269dc19e1b7112df817111409fcaf 227 Pfam PF11010 Protein of unknown function (DUF2848) 22 218 2.2E-75 T 31-10-2018 IPR021269 Protein of unknown function DUF2848 DY252_14925 b7e85f2c053d308d262ff4f309e32138 221 Gene3D G3DSA:3.40.630.70 36 211 5.4E-63 T 31-10-2018 DY252_14925 b7e85f2c053d308d262ff4f309e32138 221 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 11 198 2.0E-60 T 31-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 DY252_14925 b7e85f2c053d308d262ff4f309e32138 221 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 221 82.52 T 31-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 DY252_14925 b7e85f2c053d308d262ff4f309e32138 221 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 8 179 2.3E-69 T 31-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 DY252_14925 b7e85f2c053d308d262ff4f309e32138 221 SUPERFAMILY SSF55729 2 196 1.59E-77 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_08820 3ed559deaeedc5d7577e098050f78e93 134 Pfam PF01042 Endoribonuclease L-PSP 14 128 1.6E-30 T 31-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DY252_08820 3ed559deaeedc5d7577e098050f78e93 134 SUPERFAMILY SSF55298 8 130 1.21E-36 T 31-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DY252_08820 3ed559deaeedc5d7577e098050f78e93 134 Gene3D G3DSA:3.30.1330.40 3 131 4.0E-42 T 31-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DY252_06535 af9ec6382efca1fe5bc1d75b54638905 206 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 30 122 4.8E-14 T 31-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DY252_06535 af9ec6382efca1fe5bc1d75b54638905 206 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 8 200 4.0E-77 T 31-10-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent DY252_06535 af9ec6382efca1fe5bc1d75b54638905 206 Gene3D G3DSA:2.30.110.10 28 148 8.6E-25 T 31-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DY252_06535 af9ec6382efca1fe5bc1d75b54638905 206 SUPERFAMILY SSF50475 30 171 4.15E-16 T 31-10-2018 DY252_13150 f32f43709fe7bb440a0d4fa6abb4f000 151 Pfam PF04519 Polymer-forming cytoskeletal 27 121 5.6E-25 T 31-10-2018 IPR007607 Bactofilin A/B DY252_14475 28be2d32d1d5532e95b56f2044e932c6 347 Hamap MF_00219 Dihydroorotase [pyrC]. 4 347 45.679 T 31-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_14475 28be2d32d1d5532e95b56f2044e932c6 347 PIRSF PIRSF001237 2 347 6.2E-137 T 31-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_14475 28be2d32d1d5532e95b56f2044e932c6 347 Pfam PF01979 Amidohydrolase family 13 317 1.2E-16 T 31-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DY252_14475 28be2d32d1d5532e95b56f2044e932c6 347 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 6 345 4.6E-130 T 31-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_14475 28be2d32d1d5532e95b56f2044e932c6 347 Gene3D G3DSA:3.20.20.140 4 346 3.1E-104 T 31-10-2018 DY252_14475 28be2d32d1d5532e95b56f2044e932c6 347 ProSitePatterns PS00483 Dihydroorotase signature 2. 247 258 - T 31-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_14475 28be2d32d1d5532e95b56f2044e932c6 347 ProSitePatterns PS00482 Dihydroorotase signature 1. 13 21 - T 31-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DY252_14475 28be2d32d1d5532e95b56f2044e932c6 347 SUPERFAMILY SSF51556 4 345 2.42E-139 T 31-10-2018 IPR032466 Metal-dependent hydrolase DY252_09155 37c39f3995efa4e5bcc42234e10bde46 274 SUPERFAMILY SSF53474 56 273 8.9E-41 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_09155 37c39f3995efa4e5bcc42234e10bde46 274 Pfam PF01738 Dienelactone hydrolase family 68 272 1.9E-48 T 31-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 DY252_09155 37c39f3995efa4e5bcc42234e10bde46 274 Gene3D G3DSA:3.40.50.1820 53 271 2.8E-51 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_18935 49010ec7afa58ac5900496ea84e8ff62 291 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 275 1.6E-37 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_14650 3440b26956dee354820bd455c93a513d 260 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 228 249 1.1E-6 T 31-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DY252_14650 3440b26956dee354820bd455c93a513d 260 Gene3D G3DSA:3.40.50.300 1 250 2.4E-61 T 31-10-2018 DY252_14650 3440b26956dee354820bd455c93a513d 260 SUPERFAMILY SSF52540 2 249 7.88E-60 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_14650 3440b26956dee354820bd455c93a513d 260 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_14650 3440b26956dee354820bd455c93a513d 260 Pfam PF00005 ABC transporter 18 175 6.3E-29 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_14650 3440b26956dee354820bd455c93a513d 260 SMART SM00382 26 241 1.1E-7 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_06300 401476abf1ced2514367b692dcc982d7 212 Pfam PF05494 MlaC protein 49 207 1.9E-38 T 31-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC DY252_06300 401476abf1ced2514367b692dcc982d7 212 Gene3D G3DSA:3.10.450.710 39 211 2.9E-32 T 31-10-2018 DY252_04400 10a34c291d3888a3c2d95284e45f9c42 276 Pfam PF11299 Protein of unknown function (DUF3100) 23 260 1.3E-97 T 31-10-2018 IPR021450 Protein of unknown function DUF3100 DY252_11125 c789bc21fdcc6346bfa887f9e085d30d 276 Pfam PF00248 Aldo/keto reductase family 14 256 4.6E-52 T 31-10-2018 IPR023210 NADP-dependent oxidoreductase domain DY252_11125 c789bc21fdcc6346bfa887f9e085d30d 276 PRINTS PR00069 Aldo-keto reductase signature 89 107 4.8E-46 T 31-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DY252_11125 c789bc21fdcc6346bfa887f9e085d30d 276 PRINTS PR00069 Aldo-keto reductase signature 33 57 4.8E-46 T 31-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DY252_11125 c789bc21fdcc6346bfa887f9e085d30d 276 PRINTS PR00069 Aldo-keto reductase signature 191 215 4.8E-46 T 31-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DY252_11125 c789bc21fdcc6346bfa887f9e085d30d 276 PRINTS PR00069 Aldo-keto reductase signature 120 137 4.8E-46 T 31-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DY252_11125 c789bc21fdcc6346bfa887f9e085d30d 276 PRINTS PR00069 Aldo-keto reductase signature 154 183 4.8E-46 T 31-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DY252_11125 c789bc21fdcc6346bfa887f9e085d30d 276 PIRSF PIRSF000097 5 110 6.3E-33 T 31-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DY252_11125 c789bc21fdcc6346bfa887f9e085d30d 276 PIRSF PIRSF000097 108 274 9.7E-34 T 31-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DY252_11125 c789bc21fdcc6346bfa887f9e085d30d 276 Gene3D G3DSA:3.20.20.100 4 274 2.8E-99 T 31-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DY252_11125 c789bc21fdcc6346bfa887f9e085d30d 276 SUPERFAMILY SSF51430 7 261 2.36E-83 T 31-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DY252_11125 c789bc21fdcc6346bfa887f9e085d30d 276 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 120 137 - T 31-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DY252_11125 c789bc21fdcc6346bfa887f9e085d30d 276 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 37 54 - T 31-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DY252_11275 2309bb7dc04d42b41527d0290e8fa72b 41 Pfam PF00444 Ribosomal protein L36 1 41 1.8E-18 T 31-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_11275 2309bb7dc04d42b41527d0290e8fa72b 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.496 T 31-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_11275 2309bb7dc04d42b41527d0290e8fa72b 41 SUPERFAMILY SSF57840 1 41 1.44E-13 T 31-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_11275 2309bb7dc04d42b41527d0290e8fa72b 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 3.3E-8 T 31-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_00260 5de192d48fc9ef7f4e9345ea6c2d8db4 92 Pfam PF13744 Helix-turn-helix domain 20 90 5.5E-15 T 31-10-2018 IPR039554 HigA2-like, helix-turn-helix domain DY252_00260 5de192d48fc9ef7f4e9345ea6c2d8db4 92 SUPERFAMILY SSF47413 21 89 5.63E-9 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_00260 5de192d48fc9ef7f4e9345ea6c2d8db4 92 Gene3D G3DSA:1.10.260.40 15 92 1.4E-9 T 31-10-2018 DY252_07265 f503daf7bb033a594feb1b1d6b9d4f15 374 SUPERFAMILY SSF51717 19 210 1.96E-10 T 31-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_07265 f503daf7bb033a594feb1b1d6b9d4f15 374 Pfam PF04551 GcpE protein 15 356 3.1E-134 T 31-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DY252_07265 f503daf7bb033a594feb1b1d6b9d4f15 374 Gene3D G3DSA:3.20.20.20 3 263 2.2E-106 T 31-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_07265 f503daf7bb033a594feb1b1d6b9d4f15 374 PIRSF PIRSF004640 3 367 4.4E-148 T 31-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DY252_07265 f503daf7bb033a594feb1b1d6b9d4f15 374 Gene3D G3DSA:3.30.413.10 264 364 1.0E-25 T 31-10-2018 DY252_07265 f503daf7bb033a594feb1b1d6b9d4f15 374 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 11 356 5.7E-143 T 31-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DY252_07265 f503daf7bb033a594feb1b1d6b9d4f15 374 SUPERFAMILY SSF56014 268 355 4.45E-13 T 31-10-2018 DY252_07265 f503daf7bb033a594feb1b1d6b9d4f15 374 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 9 360 34.273 T 31-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DY252_18815 2da9720139e19c0e3f29932035196eaf 337 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 324 4.4E-42 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_12745 f4bec23de6e4a3420f5dfcb9b0160871 85 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 66 7.3E-32 T 31-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DY252_12745 f4bec23de6e4a3420f5dfcb9b0160871 85 Pfam PF17209 Hfq protein 8 70 1.8E-32 T 31-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DY252_12745 f4bec23de6e4a3420f5dfcb9b0160871 85 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 66 28.756 T 31-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DY252_12745 f4bec23de6e4a3420f5dfcb9b0160871 85 Gene3D G3DSA:2.30.30.100 1 78 1.8E-33 T 31-10-2018 DY252_12745 f4bec23de6e4a3420f5dfcb9b0160871 85 SUPERFAMILY SSF50182 7 72 4.03E-24 T 31-10-2018 IPR010920 LSM domain superfamily DY252_13610 3fac66b17990184e0dc8cee85a1ee5a6 54 Pfam PF06568 Domain of unknown function (DUF1127) 7 38 7.0E-5 T 31-10-2018 IPR009506 Protein of unknown function DUF1127 DY252_15040 273c817b0727c6746e5c299325113a06 558 Gene3D G3DSA:3.40.50.1220 178 330 7.4E-40 T 31-10-2018 DY252_15040 273c817b0727c6746e5c299325113a06 558 SUPERFAMILY SSF52467 182 345 3.27E-38 T 31-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DY252_15040 273c817b0727c6746e5c299325113a06 558 Gene3D G3DSA:3.40.50.970 1 170 1.1E-55 T 31-10-2018 DY252_15040 273c817b0727c6746e5c299325113a06 558 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 168 1.5E-44 T 31-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DY252_15040 273c817b0727c6746e5c299325113a06 558 Gene3D G3DSA:3.40.50.970 344 557 5.8E-62 T 31-10-2018 DY252_15040 273c817b0727c6746e5c299325113a06 558 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 377 523 2.0E-41 T 31-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DY252_15040 273c817b0727c6746e5c299325113a06 558 SUPERFAMILY SSF52518 1 170 3.58E-48 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_15040 273c817b0727c6746e5c299325113a06 558 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 189 317 2.1E-28 T 31-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DY252_15040 273c817b0727c6746e5c299325113a06 558 SUPERFAMILY SSF52518 354 537 5.9E-59 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_10795 9d5ac16212323d0bbdf42c84fdce9d1f 146 SUPERFAMILY SSF54637 13 141 1.11E-27 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_10795 9d5ac16212323d0bbdf42c84fdce9d1f 146 Gene3D G3DSA:3.10.129.10 13 145 1.1E-38 T 31-10-2018 DY252_10795 9d5ac16212323d0bbdf42c84fdce9d1f 146 Pfam PF03061 Thioesterase superfamily 56 129 2.9E-11 T 31-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DY252_10795 9d5ac16212323d0bbdf42c84fdce9d1f 146 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 139 1.8E-16 T 31-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 DY252_18900 62b3ac8c714b49555701929f83112350 724 Gene3D G3DSA:3.30.365.10 342 437 1.8E-57 T 31-10-2018 DY252_18900 62b3ac8c714b49555701929f83112350 724 Gene3D G3DSA:3.30.365.10 324 550 1.8E-57 T 31-10-2018 DY252_18900 62b3ac8c714b49555701929f83112350 724 PIRSF PIRSF036389 2 722 4.5E-217 T 31-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related DY252_18900 62b3ac8c714b49555701929f83112350 724 Gene3D G3DSA:3.90.1170.50 182 280 5.8E-9 T 31-10-2018 DY252_18900 62b3ac8c714b49555701929f83112350 724 SUPERFAMILY SSF56003 6 240 2.55E-37 T 31-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 DY252_18900 62b3ac8c714b49555701929f83112350 724 Gene3D G3DSA:3.30.365.10 577 721 1.1E-30 T 31-10-2018 DY252_18900 62b3ac8c714b49555701929f83112350 724 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 30 9.4E-4 T 31-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DY252_18900 62b3ac8c714b49555701929f83112350 724 Gene3D G3DSA:3.30.365.10 39 181 5.7E-19 T 31-10-2018 DY252_18900 62b3ac8c714b49555701929f83112350 724 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 576 671 1.5E-9 T 31-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DY252_18900 62b3ac8c714b49555701929f83112350 724 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 44 193 1.4E-11 T 31-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DY252_18900 62b3ac8c714b49555701929f83112350 724 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 315 578 4.8E-34 T 31-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DY252_18900 62b3ac8c714b49555701929f83112350 724 SMART SM01008 206 286 2.1E-13 T 31-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DY252_18900 62b3ac8c714b49555701929f83112350 724 SUPERFAMILY SSF56003 319 717 2.62E-109 T 31-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 DY252_21905 e829712abdfd4d07f1d28089f4012cc9 168 Pfam PF08905 Domain of unknown function (DUF1850) 62 151 6.3E-13 T 31-10-2018 IPR015001 Protein of unknown function DUF1850 DY252_03255 e7900145a7f92d891d75ed306c0b5244 310 Hamap MF_01384 Urease accessory protein UreD [ureD]. 29 294 23.407 T 31-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 DY252_03255 e7900145a7f92d891d75ed306c0b5244 310 Pfam PF01774 UreD urease accessory protein 77 283 1.6E-42 T 31-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 DY252_13790 42a53b252abddf52ac212ad53fc1ed50 266 Gene3D G3DSA:1.10.3720.10 5 262 3.8E-51 T 31-10-2018 IPR035906 MetI-like superfamily DY252_13790 42a53b252abddf52ac212ad53fc1ed50 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 260 3.4E-16 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_13790 42a53b252abddf52ac212ad53fc1ed50 266 SUPERFAMILY SSF161098 4 250 3.46E-52 T 31-10-2018 IPR035906 MetI-like superfamily DY252_20335 f5128a6ce253243d7d8b857702557c55 399 PIRSF PIRSF001554 1 398 2.6E-156 T 31-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DY252_20335 f5128a6ce253243d7d8b857702557c55 399 Gene3D G3DSA:3.40.50.261 250 398 1.4E-59 T 31-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DY252_20335 f5128a6ce253243d7d8b857702557c55 399 Pfam PF00549 CoA-ligase 272 392 1.7E-28 T 31-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DY252_20335 f5128a6ce253243d7d8b857702557c55 399 Gene3D G3DSA:3.30.1490.20 21 114 4.2E-97 T 31-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DY252_20335 f5128a6ce253243d7d8b857702557c55 399 Gene3D G3DSA:3.30.470.20 1 244 4.2E-97 T 31-10-2018 DY252_20335 f5128a6ce253243d7d8b857702557c55 399 Pfam PF08442 ATP-grasp domain 2 213 1.1E-79 T 31-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DY252_20335 f5128a6ce253243d7d8b857702557c55 399 SUPERFAMILY SSF52210 250 395 1.57E-55 T 31-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DY252_20335 f5128a6ce253243d7d8b857702557c55 399 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 396 45.233 T 31-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DY252_20335 f5128a6ce253243d7d8b857702557c55 399 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 395 8.2E-166 T 31-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DY252_20335 f5128a6ce253243d7d8b857702557c55 399 SUPERFAMILY SSF56059 1 248 3.35E-85 T 31-10-2018 DY252_20335 f5128a6ce253243d7d8b857702557c55 399 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 267 292 - T 31-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DY252_14125 4fd4ecbc944b9afa8a22521660118120 169 SUPERFAMILY SSF55729 3 164 1.05E-36 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_14125 4fd4ecbc944b9afa8a22521660118120 169 Gene3D G3DSA:3.40.630.30 1 167 2.5E-55 T 31-10-2018 DY252_14125 4fd4ecbc944b9afa8a22521660118120 169 Pfam PF13420 Acetyltransferase (GNAT) domain 3 154 7.7E-21 T 31-10-2018 DY252_12020 d5463fc064eba51d36d263212e280759 497 SUPERFAMILY SSF51126 19 292 1.53E-25 T 31-10-2018 IPR011050 Pectin lyase fold/virulence factor DY252_11460 0e34cc6322aba62ba68772549f96c790 276 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 51 265 6.0E-70 T 31-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like DY252_11460 0e34cc6322aba62ba68772549f96c790 276 SUPERFAMILY SSF53098 4 231 2.68E-32 T 31-10-2018 IPR012337 Ribonuclease H-like superfamily DY252_11460 0e34cc6322aba62ba68772549f96c790 276 Gene3D G3DSA:3.30.420.10 40 221 4.7E-21 T 31-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DY252_17155 94b1b2a20e6e379cfb480f393bcd2be9 633 Gene3D G3DSA:2.40.128.130 363 633 2.7E-19 T 31-10-2018 IPR036709 Autotransporter beta-domain superfamily DY252_17155 94b1b2a20e6e379cfb480f393bcd2be9 633 SMART SM00869 369 621 8.4E-12 T 31-10-2018 IPR005546 Autotransporter beta-domain DY252_17155 94b1b2a20e6e379cfb480f393bcd2be9 633 SUPERFAMILY SSF103515 368 633 8.11E-22 T 31-10-2018 IPR036709 Autotransporter beta-domain superfamily DY252_17155 94b1b2a20e6e379cfb480f393bcd2be9 633 Pfam PF03797 Autotransporter beta-domain 373 577 3.5E-14 T 31-10-2018 IPR005546 Autotransporter beta-domain DY252_14005 f8252f2cf14c35664b76d7b8b1709f46 204 Gene3D G3DSA:3.30.460.10 2 153 5.3E-14 T 31-10-2018 DY252_14005 f8252f2cf14c35664b76d7b8b1709f46 204 SMART SM00954 43 172 1.5E-7 T 31-10-2018 IPR007685 RelA/SpoT GO:0015969 DY252_14005 f8252f2cf14c35664b76d7b8b1709f46 204 SUPERFAMILY SSF81301 20 199 2.62E-21 T 31-10-2018 DY252_14005 f8252f2cf14c35664b76d7b8b1709f46 204 Pfam PF04607 Region found in RelA / SpoT proteins 44 168 2.4E-12 T 31-10-2018 IPR007685 RelA/SpoT GO:0015969 DY252_08180 a3d2dc9c87a6f73f797f0f957e8bb881 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 107 9.8E-29 T 31-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DY252_08180 a3d2dc9c87a6f73f797f0f957e8bb881 217 SUPERFAMILY SSF161098 13 203 1.96E-41 T 31-10-2018 IPR035906 MetI-like superfamily DY252_08180 a3d2dc9c87a6f73f797f0f957e8bb881 217 Gene3D G3DSA:1.10.3720.10 5 215 2.5E-48 T 31-10-2018 IPR035906 MetI-like superfamily DY252_08180 a3d2dc9c87a6f73f797f0f957e8bb881 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 213 8.8E-16 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_19855 508f57c3037599e3e4ea6cb88d4dc5aa 328 Pfam PF00494 Squalene/phytoene synthase 27 271 3.9E-21 T 31-10-2018 DY252_19855 508f57c3037599e3e4ea6cb88d4dc5aa 328 SUPERFAMILY SSF48576 15 266 4.75E-25 T 31-10-2018 IPR008949 Isoprenoid synthase domain superfamily DY252_19855 508f57c3037599e3e4ea6cb88d4dc5aa 328 Gene3D G3DSA:1.10.600.10 8 306 6.2E-27 T 31-10-2018 IPR008949 Isoprenoid synthase domain superfamily DY252_22055 1112cb896cdc4a0d159d9bc2903ffc11 385 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 206 243 - T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_22055 1112cb896cdc4a0d159d9bc2903ffc11 385 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 1 383 66.492 T 31-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 DY252_22055 1112cb896cdc4a0d159d9bc2903ffc11 385 Gene3D G3DSA:3.90.1150.10 8 373 1.5E-135 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_22055 1112cb896cdc4a0d159d9bc2903ffc11 385 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 1 379 2.9E-137 T 31-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 DY252_22055 1112cb896cdc4a0d159d9bc2903ffc11 385 Gene3D G3DSA:3.40.640.10 43 288 1.5E-135 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_22055 1112cb896cdc4a0d159d9bc2903ffc11 385 SUPERFAMILY SSF53383 3 379 3.94E-118 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_22055 1112cb896cdc4a0d159d9bc2903ffc11 385 PIRSF PIRSF000521 152 383 1.3E-33 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_22055 1112cb896cdc4a0d159d9bc2903ffc11 385 PIRSF PIRSF000521 4 143 3.0E-8 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_22055 1112cb896cdc4a0d159d9bc2903ffc11 385 Pfam PF00202 Aminotransferase class-III 9 378 1.1E-106 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_19795 5500bb9dce5f60aeac12a0aa37c2b084 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.6E-36 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19795 5500bb9dce5f60aeac12a0aa37c2b084 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.6E-36 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19795 5500bb9dce5f60aeac12a0aa37c2b084 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 2.6E-36 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19795 5500bb9dce5f60aeac12a0aa37c2b084 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.6E-36 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19795 5500bb9dce5f60aeac12a0aa37c2b084 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.6E-36 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19795 5500bb9dce5f60aeac12a0aa37c2b084 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.6E-36 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19795 5500bb9dce5f60aeac12a0aa37c2b084 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 246 1.3E-64 T 31-10-2018 DY252_19795 5500bb9dce5f60aeac12a0aa37c2b084 259 SUPERFAMILY SSF51735 7 248 3.27E-84 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_19795 5500bb9dce5f60aeac12a0aa37c2b084 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.0E-8 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19795 5500bb9dce5f60aeac12a0aa37c2b084 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.0E-8 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19795 5500bb9dce5f60aeac12a0aa37c2b084 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.0E-8 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_19795 5500bb9dce5f60aeac12a0aa37c2b084 259 Gene3D G3DSA:3.40.50.720 1 257 2.1E-87 T 31-10-2018 DY252_09745 fea4106b45a0722a94452e6b8b10cd0d 405 SUPERFAMILY SSF53383 3 400 3.32E-108 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_09745 fea4106b45a0722a94452e6b8b10cd0d 405 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 1 402 2.5E-192 T 31-10-2018 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: R-HSA-189451 DY252_09745 fea4106b45a0722a94452e6b8b10cd0d 405 Pfam PF00155 Aminotransferase class I and II 48 392 3.9E-76 T 31-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DY252_09745 fea4106b45a0722a94452e6b8b10cd0d 405 Gene3D G3DSA:3.90.1150.10 14 389 2.0E-161 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_09745 fea4106b45a0722a94452e6b8b10cd0d 405 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 246 255 - T 31-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 DY252_09745 fea4106b45a0722a94452e6b8b10cd0d 405 Gene3D G3DSA:3.40.640.10 64 299 2.0E-161 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_04905 1334017807c1628ba3205b05151268d5 266 SMART SM00382 47 232 1.8E-11 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_04905 1334017807c1628ba3205b05151268d5 266 SUPERFAMILY SSF52540 19 233 1.95E-57 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_04905 1334017807c1628ba3205b05151268d5 266 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_04905 1334017807c1628ba3205b05151268d5 266 Gene3D G3DSA:3.40.50.300 10 263 1.8E-65 T 31-10-2018 DY252_04905 1334017807c1628ba3205b05151268d5 266 Pfam PF00005 ABC transporter 41 184 2.3E-25 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_04950 a7e1de1d26b738a9257ee97ed69b9101 379 SUPERFAMILY SSF52402 52 197 3.09E-24 T 31-10-2018 DY252_04950 a7e1de1d26b738a9257ee97ed69b9101 379 Gene3D G3DSA:3.40.50.620 48 241 5.6E-14 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_04950 a7e1de1d26b738a9257ee97ed69b9101 379 TIGRFAM TIGR03573 WbuX: N-acetyl sugar amidotransferase 6 342 4.6E-84 T 31-10-2018 IPR020022 N-acetyl sugar amidotransferase DY252_17555 499c988820b15a1a8dbe498db2304d87 309 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 170 302 4.8E-32 T 31-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal DY252_17555 499c988820b15a1a8dbe498db2304d87 309 Gene3D G3DSA:2.30.30.760 247 306 6.4E-11 T 31-10-2018 DY252_17555 499c988820b15a1a8dbe498db2304d87 309 Pfam PF13144 Chaperone for flagella basal body P-ring formation 120 302 2.2E-32 T 31-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal DY252_17555 499c988820b15a1a8dbe498db2304d87 309 SMART SM00858 180 242 1.6E-6 T 31-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DY252_07610 0bbf8786814d5d1217f664b65b8f4267 601 Pfam PF02080 TrkA-C domain 324 387 2.1E-8 T 31-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DY252_07610 0bbf8786814d5d1217f664b65b8f4267 601 Pfam PF02080 TrkA-C domain 223 289 1.7E-8 T 31-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DY252_07610 0bbf8786814d5d1217f664b65b8f4267 601 SUPERFAMILY SSF116726 316 391 1.31E-15 T 31-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DY252_07610 0bbf8786814d5d1217f664b65b8f4267 601 Pfam PF03600 Citrate transporter 21 544 5.9E-57 T 31-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 DY252_07610 0bbf8786814d5d1217f664b65b8f4267 601 SUPERFAMILY SSF116726 219 296 7.72E-10 T 31-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DY252_07610 0bbf8786814d5d1217f664b65b8f4267 601 Gene3D G3DSA:3.30.70.1450 220 299 1.2E-8 T 31-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DY252_07610 0bbf8786814d5d1217f664b65b8f4267 601 Gene3D G3DSA:3.30.70.1450 316 391 2.1E-13 T 31-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DY252_11580 8a925404b1814ba3713f161a3d32d0fa 601 Gene3D G3DSA:1.10.246.130 299 418 1.2E-37 T 31-10-2018 DY252_11580 8a925404b1814ba3713f161a3d32d0fa 601 Gene3D G3DSA:3.60.20.40 422 600 2.5E-57 T 31-10-2018 DY252_11580 8a925404b1814ba3713f161a3d32d0fa 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 283 299 8.1E-64 T 31-10-2018 DY252_11580 8a925404b1814ba3713f161a3d32d0fa 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 480 495 8.1E-64 T 31-10-2018 DY252_11580 8a925404b1814ba3713f161a3d32d0fa 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 88 113 8.1E-64 T 31-10-2018 DY252_11580 8a925404b1814ba3713f161a3d32d0fa 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 163 181 8.1E-64 T 31-10-2018 DY252_11580 8a925404b1814ba3713f161a3d32d0fa 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 313 332 8.1E-64 T 31-10-2018 DY252_11580 8a925404b1814ba3713f161a3d32d0fa 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 422 440 8.1E-64 T 31-10-2018 DY252_11580 8a925404b1814ba3713f161a3d32d0fa 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 444 462 8.1E-64 T 31-10-2018 DY252_11580 8a925404b1814ba3713f161a3d32d0fa 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 504 521 8.1E-64 T 31-10-2018 DY252_11580 8a925404b1814ba3713f161a3d32d0fa 601 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 181 200 8.1E-64 T 31-10-2018 DY252_11580 8a925404b1814ba3713f161a3d32d0fa 601 Pfam PF01019 Gamma-glutamyltranspeptidase 81 596 2.6E-153 T 31-10-2018 DY252_11580 8a925404b1814ba3713f161a3d32d0fa 601 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 67 593 1.6E-128 T 31-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 DY252_11580 8a925404b1814ba3713f161a3d32d0fa 601 SUPERFAMILY SSF56235 58 600 3.67E-168 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_11580 8a925404b1814ba3713f161a3d32d0fa 601 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 422 446 - T 31-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 DY252_01485 73f328b978e0eaaa0076071762b1063b 426 Gene3D G3DSA:2.40.240.50 148 317 8.7E-133 T 31-10-2018 DY252_01485 73f328b978e0eaaa0076071762b1063b 426 Pfam PF06725 3D domain 331 405 4.6E-21 T 31-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 DY252_01485 73f328b978e0eaaa0076071762b1063b 426 SMART SM00925 149 306 2.0E-83 T 31-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 DY252_01485 73f328b978e0eaaa0076071762b1063b 426 Pfam PF03562 MltA specific insert domain 59 306 4.4E-80 T 31-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 DY252_01485 73f328b978e0eaaa0076071762b1063b 426 PIRSF PIRSF019422 2 417 1.1E-131 T 31-10-2018 IPR026044 Membrane-bound lytic murein transglycosylase A DY252_01485 73f328b978e0eaaa0076071762b1063b 426 Gene3D G3DSA:2.40.40.10 53 407 8.7E-133 T 31-10-2018 IPR036908 RlpA-like domain superfamily DY252_01485 73f328b978e0eaaa0076071762b1063b 426 SUPERFAMILY SSF50685 45 410 6.28E-128 T 31-10-2018 IPR036908 RlpA-like domain superfamily DY252_06750 d83a89380f321a08ea8756fbe522af82 132 Pfam PF00034 Cytochrome c 27 130 2.8E-7 T 31-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_06750 d83a89380f321a08ea8756fbe522af82 132 SUPERFAMILY SSF46626 24 131 3.2E-28 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_06750 d83a89380f321a08ea8756fbe522af82 132 PRINTS PR00604 Class IA and IB cytochrome C signature 81 97 6.1E-12 T 31-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_06750 d83a89380f321a08ea8756fbe522af82 132 PRINTS PR00604 Class IA and IB cytochrome C signature 36 43 6.1E-12 T 31-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_06750 d83a89380f321a08ea8756fbe522af82 132 PRINTS PR00604 Class IA and IB cytochrome C signature 64 74 6.1E-12 T 31-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_06750 d83a89380f321a08ea8756fbe522af82 132 PRINTS PR00604 Class IA and IB cytochrome C signature 123 131 6.1E-12 T 31-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_06750 d83a89380f321a08ea8756fbe522af82 132 PRINTS PR00604 Class IA and IB cytochrome C signature 48 63 6.1E-12 T 31-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_06750 d83a89380f321a08ea8756fbe522af82 132 Gene3D G3DSA:1.10.760.10 11 132 1.8E-31 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_00075 b8543bd82d1a1bf83318a2cbf8390a7f 304 Pfam PF00294 pfkB family carbohydrate kinase 6 297 6.0E-51 T 31-10-2018 IPR011611 Carbohydrate kinase PfkB DY252_00075 b8543bd82d1a1bf83318a2cbf8390a7f 304 SUPERFAMILY SSF53613 4 296 4.21E-65 T 31-10-2018 IPR029056 Ribokinase-like DY252_00075 b8543bd82d1a1bf83318a2cbf8390a7f 304 Gene3D G3DSA:3.40.1190.20 2 303 3.2E-69 T 31-10-2018 IPR029056 Ribokinase-like DY252_13265 3d957a9bc532856196b1bf3dd7217105 235 SUPERFAMILY SSF51306 111 233 1.92E-32 T 31-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DY252_13265 3d957a9bc532856196b1bf3dd7217105 235 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 188 200 1.2E-8 T 31-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DY252_13265 3d957a9bc532856196b1bf3dd7217105 235 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 159 170 1.2E-8 T 31-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DY252_13265 3d957a9bc532856196b1bf3dd7217105 235 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 148 158 1.2E-8 T 31-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DY252_13265 3d957a9bc532856196b1bf3dd7217105 235 Hamap MF_00015 LexA repressor [lexA]. 1 235 32.42 T 31-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 DY252_13265 3d957a9bc532856196b1bf3dd7217105 235 SUPERFAMILY SSF46785 2 68 7.98E-17 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_13265 3d957a9bc532856196b1bf3dd7217105 235 Gene3D G3DSA:2.10.109.10 117 235 3.0E-35 T 31-10-2018 DY252_13265 3d957a9bc532856196b1bf3dd7217105 235 Gene3D G3DSA:1.10.10.10 1 68 2.9E-16 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_13265 3d957a9bc532856196b1bf3dd7217105 235 Pfam PF00717 Peptidase S24-like 151 214 3.6E-12 T 31-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DY252_13265 3d957a9bc532856196b1bf3dd7217105 235 Pfam PF01726 LexA DNA binding domain 2 63 9.6E-13 T 31-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 DY252_13265 3d957a9bc532856196b1bf3dd7217105 235 TIGRFAM TIGR00498 lexA: repressor LexA 2 234 8.2E-47 T 31-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 DY252_19565 80e4103ef7e4c4a968311b3954dc1485 456 Gene3D G3DSA:3.30.460.10 24 165 2.7E-40 T 31-10-2018 DY252_19565 80e4103ef7e4c4a968311b3954dc1485 456 SUPERFAMILY SSF81301 24 165 1.2E-36 T 31-10-2018 DY252_19565 80e4103ef7e4c4a968311b3954dc1485 456 SUPERFAMILY SSF81891 167 447 1.7E-47 T 31-10-2018 DY252_19565 80e4103ef7e4c4a968311b3954dc1485 456 Gene3D G3DSA:1.10.3090.10 167 434 1.8E-35 T 31-10-2018 DY252_19565 80e4103ef7e4c4a968311b3954dc1485 456 Pfam PF01743 Poly A polymerase head domain 48 169 2.4E-28 T 31-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DY252_19565 80e4103ef7e4c4a968311b3954dc1485 456 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 200 256 1.5E-10 T 31-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DY252_14165 40b042d4f721a08ef2723a6de29a5b20 356 Pfam PF08275 DNA primase catalytic core, N-terminal domain 145 236 5.7E-6 T 31-10-2018 IPR013264 DNA primase, catalytic core, N-terminal DY252_14165 40b042d4f721a08ef2723a6de29a5b20 356 Pfam PF13155 Toprim-like 264 349 1.1E-7 T 31-10-2018 DY252_14165 40b042d4f721a08ef2723a6de29a5b20 356 Gene3D G3DSA:3.90.980.10 115 246 2.5E-8 T 31-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily DY252_14165 40b042d4f721a08ef2723a6de29a5b20 356 SMART SM00400 35 87 2.3E-5 T 31-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DY252_14165 40b042d4f721a08ef2723a6de29a5b20 356 Gene3D G3DSA:3.90.580.10 16 96 1.6E-13 T 31-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 DY252_14165 40b042d4f721a08ef2723a6de29a5b20 356 SUPERFAMILY SSF57783 28 94 3.23E-14 T 31-10-2018 DY252_14165 40b042d4f721a08ef2723a6de29a5b20 356 Gene3D G3DSA:3.40.1360.10 247 356 4.4E-12 T 31-10-2018 DY252_14165 40b042d4f721a08ef2723a6de29a5b20 356 SUPERFAMILY SSF56731 132 353 1.06E-19 T 31-10-2018 DY252_14165 40b042d4f721a08ef2723a6de29a5b20 356 Pfam PF01807 CHC2 zinc finger 34 93 1.3E-10 T 31-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DY252_09540 7476073edbc4e993f2a8c6395e78eb30 284 Pfam PF08904 Domain of unknown function (DUF1849) 42 277 4.5E-55 T 31-10-2018 IPR015000 Protein of unknown function DUF1849 DY252_06085 67bb3828c27cb1a6d14d8d60be817599 244 SUPERFAMILY SSF51206 15 147 2.09E-19 T 31-10-2018 IPR018490 Cyclic nucleotide-binding-like DY252_06085 67bb3828c27cb1a6d14d8d60be817599 244 Gene3D G3DSA:2.60.120.10 30 148 1.4E-22 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_06085 67bb3828c27cb1a6d14d8d60be817599 244 Pfam PF00027 Cyclic nucleotide-binding domain 36 118 1.5E-12 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_06085 67bb3828c27cb1a6d14d8d60be817599 244 Gene3D G3DSA:1.10.10.10 149 231 7.1E-17 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_06085 67bb3828c27cb1a6d14d8d60be817599 244 SUPERFAMILY SSF46785 149 228 6.73E-15 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_06085 67bb3828c27cb1a6d14d8d60be817599 244 Pfam PF13545 Crp-like helix-turn-helix domain 152 226 6.8E-13 T 31-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DY252_06085 67bb3828c27cb1a6d14d8d60be817599 244 SMART SM00100 14 132 1.5E-5 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_12895 d0da62aecf10577b71c314f332737fa7 147 SUPERFAMILY SSF89623 5 144 1.11E-54 T 31-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DY252_12895 d0da62aecf10577b71c314f332737fa7 147 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 6 144 1.2E-50 T 31-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 DY252_12895 d0da62aecf10577b71c314f332737fa7 147 PIRSF PIRSF005384 4 146 2.6E-56 T 31-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DY252_12895 d0da62aecf10577b71c314f332737fa7 147 Gene3D G3DSA:3.40.1400.10 1 146 1.1E-57 T 31-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DY252_12895 d0da62aecf10577b71c314f332737fa7 147 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 7 144 4.1E-55 T 31-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DY252_12895 d0da62aecf10577b71c314f332737fa7 147 Pfam PF02502 Ribose/Galactose Isomerase 7 143 4.8E-56 T 31-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DY252_21695 2416463881d045b4eeee5932f71870ee 379 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 379 48.546 T 31-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 DY252_21695 2416463881d045b4eeee5932f71870ee 379 SUPERFAMILY SSF53187 3 377 3.52E-60 T 31-10-2018 DY252_21695 2416463881d045b4eeee5932f71870ee 379 Pfam PF07687 Peptidase dimerisation domain 180 286 9.4E-22 T 31-10-2018 IPR011650 Peptidase M20, dimerisation domain DY252_21695 2416463881d045b4eeee5932f71870ee 379 Pfam PF01546 Peptidase family M20/M25/M40 67 374 1.8E-41 T 31-10-2018 IPR002933 Peptidase M20 GO:0016787 DY252_21695 2416463881d045b4eeee5932f71870ee 379 Gene3D G3DSA:3.40.630.10 7 366 1.7E-113 T 31-10-2018 DY252_21695 2416463881d045b4eeee5932f71870ee 379 SUPERFAMILY SSF55031 184 293 1.64E-26 T 31-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DY252_21695 2416463881d045b4eeee5932f71870ee 379 Gene3D G3DSA:3.30.70.360 184 297 1.7E-113 T 31-10-2018 DY252_21695 2416463881d045b4eeee5932f71870ee 379 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 375 1.2E-133 T 31-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 DY252_02960 190bae506429d015675cd86199b0e874 409 Pfam PF00999 Sodium/hydrogen exchanger family 12 397 9.9E-35 T 31-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DY252_02410 8e1d9964527423c266823ed44b3309a0 649 SUPERFAMILY SSF51735 288 565 8.36E-54 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_02410 8e1d9964527423c266823ed44b3309a0 649 Gene3D G3DSA:3.40.50.720 144 275 1.2E-17 T 31-10-2018 DY252_02410 8e1d9964527423c266823ed44b3309a0 649 Pfam PF02719 Polysaccharide biosynthesis protein 294 583 1.7E-113 T 31-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain DY252_02410 8e1d9964527423c266823ed44b3309a0 649 Gene3D G3DSA:3.40.50.720 289 627 2.0E-112 T 31-10-2018 DY252_02410 8e1d9964527423c266823ed44b3309a0 649 Pfam PF13727 CoA-binding domain 61 206 2.3E-9 T 31-10-2018 DY252_15430 7d1eafaeb2759bbc7425b5ebcede5b42 445 PIRSF PIRSF006060 2 444 5.8E-59 T 31-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DY252_15430 7d1eafaeb2759bbc7425b5ebcede5b42 445 Gene3D G3DSA:1.20.1740.10 6 442 4.5E-75 T 31-10-2018 DY252_15430 7d1eafaeb2759bbc7425b5ebcede5b42 445 Pfam PF13520 Amino acid permease 12 400 4.0E-27 T 31-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DY252_03365 088bd5e10a64843debe74e91e3be4f76 339 Gene3D G3DSA:3.30.1370.60 65 305 2.1E-91 T 31-10-2018 DY252_03365 088bd5e10a64843debe74e91e3be4f76 339 Gene3D G3DSA:1.10.1530.10 18 332 2.1E-91 T 31-10-2018 DY252_03365 088bd5e10a64843debe74e91e3be4f76 339 Pfam PF02615 Malate/L-lactate dehydrogenase 8 332 7.3E-95 T 31-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 DY252_03365 088bd5e10a64843debe74e91e3be4f76 339 SUPERFAMILY SSF89733 5 335 4.19E-95 T 31-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 DY252_03365 088bd5e10a64843debe74e91e3be4f76 339 Gene3D G3DSA:3.30.60.50 181 228 2.1E-91 T 31-10-2018 DY252_04900 5da15a46d894afbfbcccabbdd7bc7edd 409 Gene3D G3DSA:1.10.3470.10 26 287 3.4E-9 T 31-10-2018 IPR037294 ABC transporter, BtuC-like DY252_04900 5da15a46d894afbfbcccabbdd7bc7edd 409 Pfam PF00950 ABC 3 transport family 23 286 1.4E-54 T 31-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DY252_04900 5da15a46d894afbfbcccabbdd7bc7edd 409 SUPERFAMILY SSF81345 23 282 4.71E-28 T 31-10-2018 IPR037294 ABC transporter, BtuC-like DY252_07535 de8ad34077da8f7e801e620e4a3283a8 147 Gene3D G3DSA:1.10.10.10 1 143 4.3E-42 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_07535 de8ad34077da8f7e801e620e4a3283a8 147 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 48 66 - T 31-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site DY252_07535 de8ad34077da8f7e801e620e4a3283a8 147 Pfam PF02082 Transcriptional regulator 1 82 1.4E-25 T 31-10-2018 IPR000944 Transcription regulator Rrf2-type DY252_07535 de8ad34077da8f7e801e620e4a3283a8 147 SUPERFAMILY SSF46785 1 135 1.57E-31 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_07535 de8ad34077da8f7e801e620e4a3283a8 147 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 133 1.4E-35 T 31-10-2018 IPR000944 Transcription regulator Rrf2-type DY252_20210 024c177c3a48b8b103074dd8dc2c3db0 472 SUPERFAMILY SSF50615 4 76 4.71E-26 T 31-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DY252_20210 024c177c3a48b8b103074dd8dc2c3db0 472 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 350 2.0E-62 T 31-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DY252_20210 024c177c3a48b8b103074dd8dc2c3db0 472 SMART SM00382 144 413 6.0E-6 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_20210 024c177c3a48b8b103074dd8dc2c3db0 472 Hamap MF_01347 ATP synthase subunit beta [atpB]. 4 468 57.833 T 31-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 DY252_20210 024c177c3a48b8b103074dd8dc2c3db0 472 SUPERFAMILY SSF47917 353 469 5.49E-54 T 31-10-2018 DY252_20210 024c177c3a48b8b103074dd8dc2c3db0 472 PIRSF PIRSF039072 1 472 6.1E-287 T 31-10-2018 DY252_20210 024c177c3a48b8b103074dd8dc2c3db0 472 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 341 350 - T 31-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DY252_20210 024c177c3a48b8b103074dd8dc2c3db0 472 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 9 75 4.5E-23 T 31-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DY252_20210 024c177c3a48b8b103074dd8dc2c3db0 472 Gene3D G3DSA:3.40.50.300 78 352 2.0E-118 T 31-10-2018 DY252_20210 024c177c3a48b8b103074dd8dc2c3db0 472 SUPERFAMILY SSF52540 79 355 2.23E-90 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_20210 024c177c3a48b8b103074dd8dc2c3db0 472 Gene3D G3DSA:1.10.1140.10 353 472 3.2E-59 T 31-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DY252_20210 024c177c3a48b8b103074dd8dc2c3db0 472 Gene3D G3DSA:2.40.10.170 1 77 3.4E-34 T 31-10-2018 DY252_20210 024c177c3a48b8b103074dd8dc2c3db0 472 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 6 468 1.2E-257 T 31-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 DY252_17375 162a734caa3d8c1fd7e118ffa3dd6734 159 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 40 2.1E-5 T 31-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 DY252_17375 162a734caa3d8c1fd7e118ffa3dd6734 159 SUPERFAMILY SSF55021 54 131 3.66E-23 T 31-10-2018 DY252_17375 162a734caa3d8c1fd7e118ffa3dd6734 159 Gene3D G3DSA:3.30.70.1150 51 134 2.8E-31 T 31-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal DY252_17375 162a734caa3d8c1fd7e118ffa3dd6734 159 SUPERFAMILY SSF47598 1 45 2.89E-9 T 31-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 DY252_17375 162a734caa3d8c1fd7e118ffa3dd6734 159 Pfam PF08753 NikR C terminal nickel binding domain 54 129 8.7E-27 T 31-10-2018 IPR014864 Transcription factor, NikR, nickel binding C-terminal DY252_17375 162a734caa3d8c1fd7e118ffa3dd6734 159 Gene3D G3DSA:1.10.1220.10 2 47 2.7E-19 T 31-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DY252_17375 162a734caa3d8c1fd7e118ffa3dd6734 159 Hamap MF_00476 Nickel-responsive regulator [nikR]. 1 132 26.472 T 31-10-2018 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 DY252_14205 8db8784bed9393c44f222ba35d4b0613 313 Gene3D G3DSA:2.70.98.10 1 313 4.5E-106 T 31-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DY252_14205 8db8784bed9393c44f222ba35d4b0613 313 Pfam PF01263 Aldose 1-epimerase 24 309 1.8E-69 T 31-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 DY252_14205 8db8784bed9393c44f222ba35d4b0613 313 PIRSF PIRSF005096 1 313 5.7E-93 T 31-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 DY252_14205 8db8784bed9393c44f222ba35d4b0613 313 SUPERFAMILY SSF74650 2 313 4.02E-95 T 31-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DY252_15130 47b544f8d022bdde1910686c598a0a95 171 PIRSF PIRSF030820 1 169 1.1E-50 T 31-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 DY252_15130 47b544f8d022bdde1910686c598a0a95 171 Pfam PF06073 Bacterial protein of unknown function (DUF934) 52 156 3.2E-37 T 31-10-2018 IPR008318 Uncharacterised conserved protein UCP030820 DY252_13625 85183812be4bc04097d52760a8623247 420 SUPERFAMILY SSF53850 30 416 2.46E-62 T 31-10-2018 DY252_13625 85183812be4bc04097d52760a8623247 420 Gene3D G3DSA:3.40.190.10 144 399 6.7E-156 T 31-10-2018 DY252_13625 85183812be4bc04097d52760a8623247 420 Pfam PF01547 Bacterial extracellular solute-binding protein 47 322 4.5E-27 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_13625 85183812be4bc04097d52760a8623247 420 Gene3D G3DSA:3.40.190.10 30 376 6.7E-156 T 31-10-2018 DY252_07580 b9f8c2b2e168d54312352031f61a394c 338 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 106 121 - T 31-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DY252_07580 b9f8c2b2e168d54312352031f61a394c 338 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 44 57 - T 31-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DY252_07580 b9f8c2b2e168d54312352031f61a394c 338 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 233 242 - T 31-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DY252_07580 b9f8c2b2e168d54312352031f61a394c 338 SUPERFAMILY SSF52540 21 261 2.83E-71 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07580 b9f8c2b2e168d54312352031f61a394c 338 Gene3D G3DSA:1.10.8.60 191 269 1.3E-22 T 31-10-2018 DY252_07580 b9f8c2b2e168d54312352031f61a394c 338 Gene3D G3DSA:1.10.10.60 276 337 2.3E-6 T 31-10-2018 DY252_07580 b9f8c2b2e168d54312352031f61a394c 338 Pfam PF00158 Sigma-54 interaction domain 28 186 5.6E-68 T 31-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DY252_07580 b9f8c2b2e168d54312352031f61a394c 338 SUPERFAMILY SSF46689 233 337 2.55E-8 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_07580 b9f8c2b2e168d54312352031f61a394c 338 Gene3D G3DSA:3.40.50.300 13 190 7.1E-64 T 31-10-2018 DY252_07580 b9f8c2b2e168d54312352031f61a394c 338 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 301 318 3.0E-5 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_07580 b9f8c2b2e168d54312352031f61a394c 338 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 318 338 3.0E-5 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_07580 b9f8c2b2e168d54312352031f61a394c 338 SMART SM00382 40 183 3.1E-11 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_07580 b9f8c2b2e168d54312352031f61a394c 338 Pfam PF02954 Bacterial regulatory protein, Fis family 300 329 5.2E-5 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_10525 adb4d7840d7f903b503fd330a8e872b8 350 Pfam PF14525 AraC-binding-like domain 48 205 1.6E-11 T 31-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like DY252_10525 adb4d7840d7f903b503fd330a8e872b8 350 SUPERFAMILY SSF46689 274 330 5.89E-10 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_10525 adb4d7840d7f903b503fd330a8e872b8 350 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 275 320 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_10525 adb4d7840d7f903b503fd330a8e872b8 350 Pfam PF12833 Helix-turn-helix domain 247 325 1.8E-17 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_10525 adb4d7840d7f903b503fd330a8e872b8 350 Gene3D G3DSA:1.10.10.60 226 332 1.6E-21 T 31-10-2018 DY252_10525 adb4d7840d7f903b503fd330a8e872b8 350 SMART SM00342 240 324 2.7E-19 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_03045 ac7b10c1258dcfd26391294d4f195aea 83 SMART SM00530 14 69 1.4E-6 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_03045 ac7b10c1258dcfd26391294d4f195aea 83 SUPERFAMILY SSF47413 4 79 4.22E-16 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_03045 ac7b10c1258dcfd26391294d4f195aea 83 Gene3D G3DSA:1.10.260.40 2 81 1.7E-16 T 31-10-2018 DY252_03045 ac7b10c1258dcfd26391294d4f195aea 83 Pfam PF01381 Helix-turn-helix 15 66 6.8E-9 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_08175 9159e9820ea6ffca52334c08ac445c20 223 SUPERFAMILY SSF161098 14 202 7.3E-38 T 31-10-2018 IPR035906 MetI-like superfamily DY252_08175 9159e9820ea6ffca52334c08ac445c20 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 9.9E-30 T 31-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DY252_08175 9159e9820ea6ffca52334c08ac445c20 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 210 1.7E-13 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_08175 9159e9820ea6ffca52334c08ac445c20 223 Gene3D G3DSA:1.10.3720.10 3 217 8.8E-45 T 31-10-2018 IPR035906 MetI-like superfamily DY252_07150 5fc51449285e5a2f5cf876478146f6c2 232 Pfam PF04002 RadC-like JAB domain 111 229 9.7E-44 T 31-10-2018 IPR025657 RadC-like JAB domain DY252_07150 5fc51449285e5a2f5cf876478146f6c2 232 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 181 186 - T 31-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site DY252_07150 5fc51449285e5a2f5cf876478146f6c2 232 SUPERFAMILY SSF47781 23 91 5.19E-7 T 31-10-2018 IPR010994 RuvA domain 2-like DY252_07150 5fc51449285e5a2f5cf876478146f6c2 232 SUPERFAMILY SSF102712 151 199 1.83E-5 T 31-10-2018 DY252_07150 5fc51449285e5a2f5cf876478146f6c2 232 Gene3D G3DSA:1.10.150.20 41 93 2.5E-5 T 31-10-2018 DY252_07150 5fc51449285e5a2f5cf876478146f6c2 232 TIGRFAM TIGR00608 radc: DNA repair protein RadC 19 231 1.3E-68 T 31-10-2018 IPR001405 Uncharacterised protein family UPF0758 DY252_07150 5fc51449285e5a2f5cf876478146f6c2 232 Gene3D G3DSA:3.40.140.10 110 232 6.7E-43 T 31-10-2018 DY252_21760 2e935bb8eb172ad707752b9a1944c266 623 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 290 420 2.1E-34 T 31-10-2018 DY252_21760 2e935bb8eb172ad707752b9a1944c266 623 Gene3D G3DSA:3.10.180.10 282 431 4.1E-40 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_21760 2e935bb8eb172ad707752b9a1944c266 623 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 480 546 7.4E-5 T 31-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DY252_21760 2e935bb8eb172ad707752b9a1944c266 623 SUPERFAMILY SSF54593 281 609 1.59E-54 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_21760 2e935bb8eb172ad707752b9a1944c266 623 SUPERFAMILY SSF51658 1 264 4.7E-73 T 31-10-2018 IPR036237 Xylose isomerase-like superfamily DY252_21760 2e935bb8eb172ad707752b9a1944c266 623 Gene3D G3DSA:3.10.180.10 432 622 4.2E-43 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_21760 2e935bb8eb172ad707752b9a1944c266 623 Pfam PF01261 Xylose isomerase-like TIM barrel 18 217 2.6E-37 T 31-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DY252_21760 2e935bb8eb172ad707752b9a1944c266 623 Gene3D G3DSA:3.20.20.150 1 264 1.5E-71 T 31-10-2018 DY252_14695 b8037d7190343596dd362485e7e66db7 138 SUPERFAMILY SSF143100 14 80 7.72E-17 T 31-10-2018 IPR035069 TTHA1013/TTHA0281-like DY252_14695 b8037d7190343596dd362485e7e66db7 138 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 23 129 2.4E-21 T 31-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system DY252_14695 b8037d7190343596dd362485e7e66db7 138 Gene3D G3DSA:3.30.160.250 20 95 1.3E-17 T 31-10-2018 DY252_12730 d2a14899ca85e5a8fee68ecda251c39d 274 Gene3D G3DSA:1.10.287.1080 5 130 4.5E-46 T 31-10-2018 DY252_12730 d2a14899ca85e5a8fee68ecda251c39d 274 SUPERFAMILY SSF101386 7 110 4.3E-25 T 31-10-2018 DY252_12730 d2a14899ca85e5a8fee68ecda251c39d 274 TIGRFAM TIGR00444 mazG: MazG family protein 15 267 1.7E-96 T 31-10-2018 IPR011551 NTP pyrophosphohydrolase MazG DY252_12730 d2a14899ca85e5a8fee68ecda251c39d 274 Gene3D G3DSA:1.10.287.1080 140 271 1.4E-45 T 31-10-2018 DY252_12730 d2a14899ca85e5a8fee68ecda251c39d 274 SUPERFAMILY SSF101386 149 246 1.81E-23 T 31-10-2018 DY252_12730 d2a14899ca85e5a8fee68ecda251c39d 274 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 178 236 7.7E-7 T 31-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DY252_12730 d2a14899ca85e5a8fee68ecda251c39d 274 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 32 105 1.9E-28 T 31-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DY252_06335 9417b4f73b68757b1f6686eab35c1ae6 597 Gene3D G3DSA:1.10.3080.10 11 440 1.3E-100 T 31-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 DY252_06335 9417b4f73b68757b1f6686eab35c1ae6 597 Gene3D G3DSA:3.10.580.10 448 578 1.4E-19 T 31-10-2018 DY252_06335 9417b4f73b68757b1f6686eab35c1ae6 597 Pfam PF00654 Voltage gated chloride channel 81 423 3.0E-85 T 31-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DY252_06335 9417b4f73b68757b1f6686eab35c1ae6 597 SUPERFAMILY SSF81340 10 441 2.62E-105 T 31-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 DY252_06335 9417b4f73b68757b1f6686eab35c1ae6 597 PRINTS PR00762 Chloride channel signature 175 194 4.5E-25 T 31-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DY252_06335 9417b4f73b68757b1f6686eab35c1ae6 597 PRINTS PR00762 Chloride channel signature 338 358 4.5E-25 T 31-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DY252_06335 9417b4f73b68757b1f6686eab35c1ae6 597 PRINTS PR00762 Chloride channel signature 124 143 4.5E-25 T 31-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DY252_06335 9417b4f73b68757b1f6686eab35c1ae6 597 PRINTS PR00762 Chloride channel signature 391 410 4.5E-25 T 31-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DY252_06335 9417b4f73b68757b1f6686eab35c1ae6 597 PRINTS PR00762 Chloride channel signature 373 389 4.5E-25 T 31-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DY252_06335 9417b4f73b68757b1f6686eab35c1ae6 597 Pfam PF00571 CBS domain 456 509 1.9E-8 T 31-10-2018 IPR000644 CBS domain DY252_06335 9417b4f73b68757b1f6686eab35c1ae6 597 Pfam PF00571 CBS domain 521 576 9.1E-6 T 31-10-2018 IPR000644 CBS domain DY252_06335 9417b4f73b68757b1f6686eab35c1ae6 597 SUPERFAMILY SSF54631 454 578 8.66E-21 T 31-10-2018 DY252_06335 9417b4f73b68757b1f6686eab35c1ae6 597 SMART SM00116 528 580 6.2 T 31-10-2018 IPR000644 CBS domain DY252_06335 9417b4f73b68757b1f6686eab35c1ae6 597 SMART SM00116 463 511 1.7 T 31-10-2018 IPR000644 CBS domain DY252_21485 d508abe1aeced977fde7760933c73c38 319 Gene3D G3DSA:1.10.10.60 205 312 1.0E-25 T 31-10-2018 DY252_21485 d508abe1aeced977fde7760933c73c38 319 SUPERFAMILY SSF46689 260 309 9.41E-12 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_21485 d508abe1aeced977fde7760933c73c38 319 SMART SM00342 225 307 2.5E-21 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_21485 d508abe1aeced977fde7760933c73c38 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 261 303 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_21485 d508abe1aeced977fde7760933c73c38 319 Pfam PF12833 Helix-turn-helix domain 232 308 5.0E-18 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_02380 68b04b1a704e6b5e02ec2fe52def662b 269 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 14 255 2.1E-79 T 31-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_02380 68b04b1a704e6b5e02ec2fe52def662b 269 PIRSF PIRSF000513 7 269 1.3E-89 T 31-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_02380 68b04b1a704e6b5e02ec2fe52def662b 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 34 55 1.5E-35 T 31-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_02380 68b04b1a704e6b5e02ec2fe52def662b 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 121 135 1.5E-35 T 31-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_02380 68b04b1a704e6b5e02ec2fe52def662b 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 21 28 1.5E-35 T 31-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_02380 68b04b1a704e6b5e02ec2fe52def662b 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 165 182 1.5E-35 T 31-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_02380 68b04b1a704e6b5e02ec2fe52def662b 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 91 108 1.5E-35 T 31-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_02380 68b04b1a704e6b5e02ec2fe52def662b 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 65 73 1.5E-35 T 31-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_02380 68b04b1a704e6b5e02ec2fe52def662b 269 SUPERFAMILY SSF53613 13 263 2.18E-56 T 31-10-2018 IPR029056 Ribokinase-like DY252_02380 68b04b1a704e6b5e02ec2fe52def662b 269 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 15 261 31.938 T 31-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_02380 68b04b1a704e6b5e02ec2fe52def662b 269 Gene3D G3DSA:3.40.1190.20 1 269 1.1E-94 T 31-10-2018 IPR029056 Ribokinase-like DY252_02380 68b04b1a704e6b5e02ec2fe52def662b 269 Pfam PF02110 Hydroxyethylthiazole kinase family 14 255 3.1E-78 T 31-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_16270 88b89ab188398d941e5e82683e7cf717 673 SUPERFAMILY SSF81345 27 339 3.92E-61 T 31-10-2018 IPR037294 ABC transporter, BtuC-like DY252_16270 88b89ab188398d941e5e82683e7cf717 673 Gene3D G3DSA:1.10.3470.10 347 673 4.4E-60 T 31-10-2018 IPR037294 ABC transporter, BtuC-like DY252_16270 88b89ab188398d941e5e82683e7cf717 673 Pfam PF01032 FecCD transport family 366 670 6.3E-59 T 31-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DY252_16270 88b89ab188398d941e5e82683e7cf717 673 Pfam PF01032 FecCD transport family 30 339 3.1E-71 T 31-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DY252_16270 88b89ab188398d941e5e82683e7cf717 673 Gene3D G3DSA:1.10.3470.10 17 343 1.6E-76 T 31-10-2018 IPR037294 ABC transporter, BtuC-like DY252_16270 88b89ab188398d941e5e82683e7cf717 673 SUPERFAMILY SSF81345 359 671 2.09E-53 T 31-10-2018 IPR037294 ABC transporter, BtuC-like DY252_03695 fbdc20c62948020bcc30b1a920079491 159 Gene3D G3DSA:1.10.10.10 7 58 4.4E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_03695 fbdc20c62948020bcc30b1a920079491 159 SUPERFAMILY SSF46785 4 96 2.18E-16 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_03695 fbdc20c62948020bcc30b1a920079491 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 31-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DY252_03695 fbdc20c62948020bcc30b1a920079491 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 1.2E-13 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_03695 fbdc20c62948020bcc30b1a920079491 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 1.2E-13 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_03695 fbdc20c62948020bcc30b1a920079491 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 1.2E-13 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_03695 fbdc20c62948020bcc30b1a920079491 159 SUPERFAMILY SSF54909 66 155 6.17E-19 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_03695 fbdc20c62948020bcc30b1a920079491 159 Gene3D G3DSA:3.30.70.920 59 143 1.7E-23 T 31-10-2018 DY252_03695 fbdc20c62948020bcc30b1a920079491 159 SMART SM00344 6 115 4.3E-35 T 31-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DY252_03695 fbdc20c62948020bcc30b1a920079491 159 Pfam PF01037 Lrp/AsnC ligand binding domain 72 146 4.2E-19 T 31-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DY252_03695 fbdc20c62948020bcc30b1a920079491 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 1.0E-18 T 31-10-2018 DY252_17095 05dec6d7497337b0361415fb930e7916 194 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 5 180 1.5E-54 T 31-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG DY252_17095 05dec6d7497337b0361415fb930e7916 194 Pfam PF03641 Possible lysine decarboxylase 49 178 1.0E-35 T 31-10-2018 IPR031100 LOG family DY252_17095 05dec6d7497337b0361415fb930e7916 194 Gene3D G3DSA:3.40.50.450 4 191 9.0E-71 T 31-10-2018 DY252_17095 05dec6d7497337b0361415fb930e7916 194 SUPERFAMILY SSF102405 3 179 1.3E-60 T 31-10-2018 DY252_00470 0b99f74fa28944ea6d416b9bb9952ce2 146 Pfam PF13411 MerR HTH family regulatory protein 9 72 1.7E-16 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00470 0b99f74fa28944ea6d416b9bb9952ce2 146 SUPERFAMILY SSF46955 8 121 9.89E-33 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_00470 0b99f74fa28944ea6d416b9bb9952ce2 146 SMART SM00422 8 77 7.6E-22 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00470 0b99f74fa28944ea6d416b9bb9952ce2 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 9.6E-11 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00470 0b99f74fa28944ea6d416b9bb9952ce2 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 9.6E-11 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00470 0b99f74fa28944ea6d416b9bb9952ce2 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 9.6E-11 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00470 0b99f74fa28944ea6d416b9bb9952ce2 146 Gene3D G3DSA:1.10.1660.10 2 131 1.9E-30 T 31-10-2018 DY252_00470 0b99f74fa28944ea6d416b9bb9952ce2 146 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_03725 ce4cce3f08a69cb6148f7ab1ff4b95a8 407 SUPERFAMILY SSF52172 1 128 1.85E-29 T 31-10-2018 IPR011006 CheY-like superfamily DY252_03725 ce4cce3f08a69cb6148f7ab1ff4b95a8 407 Gene3D G3DSA:1.10.3210.10 127 401 1.6E-58 T 31-10-2018 DY252_03725 ce4cce3f08a69cb6148f7ab1ff4b95a8 407 Gene3D G3DSA:3.40.50.2300 1 126 3.4E-28 T 31-10-2018 DY252_03725 ce4cce3f08a69cb6148f7ab1ff4b95a8 407 Pfam PF08668 HDOD domain 139 336 8.9E-48 T 31-10-2018 IPR013976 Metal-dependent hydrolase HDOD DY252_03725 ce4cce3f08a69cb6148f7ab1ff4b95a8 407 PIRSF PIRSF036883 1 392 3.9E-57 T 31-10-2018 IPR014626 Signal transduction response regulator with modified HD-GYP domain, putative DY252_03725 ce4cce3f08a69cb6148f7ab1ff4b95a8 407 SMART SM00448 2 114 1.7E-18 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_03725 ce4cce3f08a69cb6148f7ab1ff4b95a8 407 Pfam PF00072 Response regulator receiver domain 4 114 2.3E-21 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_03725 ce4cce3f08a69cb6148f7ab1ff4b95a8 407 SUPERFAMILY SSF109604 129 374 3.14E-52 T 31-10-2018 DY252_22035 27ed958135aef734b863aa6c54bd682a 407 Gene3D G3DSA:1.10.10.60 272 378 6.5E-24 T 31-10-2018 DY252_22035 27ed958135aef734b863aa6c54bd682a 407 Pfam PF12833 Helix-turn-helix domain 298 376 2.7E-17 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_22035 27ed958135aef734b863aa6c54bd682a 407 SUPERFAMILY SSF46689 328 376 4.48E-11 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_22035 27ed958135aef734b863aa6c54bd682a 407 SMART SM00342 292 375 3.0E-16 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_11680 b66975c2e13d8dc8bbefa4239dfde55a 406 Gene3D G3DSA:1.10.3720.10 123 403 1.5E-48 T 31-10-2018 IPR035906 MetI-like superfamily DY252_11680 b66975c2e13d8dc8bbefa4239dfde55a 406 SUPERFAMILY SSF161098 126 400 9.48E-51 T 31-10-2018 IPR035906 MetI-like superfamily DY252_11680 b66975c2e13d8dc8bbefa4239dfde55a 406 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 207 393 9.7E-14 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_16870 cc924750f92ac15c9b1f29118fc414ba 161 Hamap MF_00930 Transcription elongation factor GreB [greB]. 2 158 50.571 T 31-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 DY252_16870 cc924750f92ac15c9b1f29118fc414ba 161 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 157 6.9E-25 T 31-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DY252_16870 cc924750f92ac15c9b1f29118fc414ba 161 SUPERFAMILY SSF46557 5 77 2.75E-25 T 31-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DY252_16870 cc924750f92ac15c9b1f29118fc414ba 161 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 31-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DY252_16870 cc924750f92ac15c9b1f29118fc414ba 161 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 6 158 6.7E-64 T 31-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 DY252_16870 cc924750f92ac15c9b1f29118fc414ba 161 SUPERFAMILY SSF54534 82 157 1.29E-20 T 31-10-2018 DY252_16870 cc924750f92ac15c9b1f29118fc414ba 161 Gene3D G3DSA:3.10.50.30 79 159 4.7E-28 T 31-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 DY252_16870 cc924750f92ac15c9b1f29118fc414ba 161 PIRSF PIRSF006092 1 158 1.0E-45 T 31-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 DY252_16870 cc924750f92ac15c9b1f29118fc414ba 161 Gene3D G3DSA:1.10.287.180 3 77 2.7E-27 T 31-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DY252_16870 cc924750f92ac15c9b1f29118fc414ba 161 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 156 27.125 T 31-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 DY252_16870 cc924750f92ac15c9b1f29118fc414ba 161 Pfam PF03449 Transcription elongation factor, N-terminal 5 75 4.2E-25 T 31-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 DY252_19425 88a5f7095efca295447606e38bd55d66 346 SUPERFAMILY SSF47413 5 53 6.44E-13 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_19425 88a5f7095efca295447606e38bd55d66 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 1.2E-15 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_19425 88a5f7095efca295447606e38bd55d66 346 Pfam PF13377 Periplasmic binding protein-like domain 178 340 1.2E-33 T 31-10-2018 DY252_19425 88a5f7095efca295447606e38bd55d66 346 Gene3D G3DSA:3.40.50.2300 83 332 2.7E-53 T 31-10-2018 DY252_19425 88a5f7095efca295447606e38bd55d66 346 Gene3D G3DSA:3.40.50.2300 168 337 2.7E-53 T 31-10-2018 DY252_19425 88a5f7095efca295447606e38bd55d66 346 SMART SM00354 6 72 6.1E-8 T 31-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DY252_19425 88a5f7095efca295447606e38bd55d66 346 SUPERFAMILY SSF53822 78 342 1.07E-48 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_19425 88a5f7095efca295447606e38bd55d66 346 Gene3D G3DSA:1.10.260.40 1 50 1.4E-17 T 31-10-2018 DY252_10515 12f14642ed32c4328a068e969c7a335c 140 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 101 119 - T 31-10-2018 IPR001602 Uncharacterised protein family UPF0047 DY252_10515 12f14642ed32c4328a068e969c7a335c 140 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 11 140 8.0E-42 T 31-10-2018 IPR001602 Uncharacterised protein family UPF0047 DY252_10515 12f14642ed32c4328a068e969c7a335c 140 Gene3D G3DSA:2.60.120.460 2 140 3.5E-42 T 31-10-2018 IPR035917 YjbQ-like superfamily DY252_10515 12f14642ed32c4328a068e969c7a335c 140 PIRSF PIRSF004681 1 140 1.9E-48 T 31-10-2018 IPR001602 Uncharacterised protein family UPF0047 DY252_10515 12f14642ed32c4328a068e969c7a335c 140 Pfam PF01894 Uncharacterised protein family UPF0047 20 136 1.1E-37 T 31-10-2018 IPR001602 Uncharacterised protein family UPF0047 DY252_10515 12f14642ed32c4328a068e969c7a335c 140 SUPERFAMILY SSF111038 6 140 1.83E-46 T 31-10-2018 IPR035917 YjbQ-like superfamily DY252_20585 33bb24aa6350f2066f348954638003e5 338 Gene3D G3DSA:1.20.58.90 288 336 4.4E-12 T 31-10-2018 DY252_20585 33bb24aa6350f2066f348954638003e5 338 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 39 274 1.2E-64 T 31-10-2018 DY252_20585 33bb24aa6350f2066f348954638003e5 338 SUPERFAMILY SSF53850 58 250 2.27E-35 T 31-10-2018 DY252_20585 33bb24aa6350f2066f348954638003e5 338 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 10 259 2.2E-81 T 31-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 DY252_20585 33bb24aa6350f2066f348954638003e5 338 Gene3D G3DSA:3.40.190.10 39 262 7.9E-89 T 31-10-2018 DY252_20585 33bb24aa6350f2066f348954638003e5 338 Gene3D G3DSA:3.40.190.10 122 235 7.9E-89 T 31-10-2018 DY252_20585 33bb24aa6350f2066f348954638003e5 338 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 3 303 8.2E-93 T 31-10-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 DY252_04515 b0adc8eb6c76d5ad12b8f30c9b2d4e5b 269 SMART SM00382 32 242 3.8E-9 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_04515 b0adc8eb6c76d5ad12b8f30c9b2d4e5b 269 Pfam PF00005 ABC transporter 23 185 7.0E-30 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_04515 b0adc8eb6c76d5ad12b8f30c9b2d4e5b 269 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 234 256 1.8E-9 T 31-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DY252_04515 b0adc8eb6c76d5ad12b8f30c9b2d4e5b 269 Gene3D G3DSA:3.40.50.300 1 268 6.2E-62 T 31-10-2018 DY252_04515 b0adc8eb6c76d5ad12b8f30c9b2d4e5b 269 SUPERFAMILY SSF52540 6 257 1.46E-63 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_17205 120a1f41ab75c9502cd276ae6d621ef4 404 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 270 289 - T 31-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DY252_17205 120a1f41ab75c9502cd276ae6d621ef4 404 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 394 2.0E-72 T 31-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DY252_17205 120a1f41ab75c9502cd276ae6d621ef4 404 Gene3D G3DSA:3.40.718.10 1 404 4.3E-218 T 31-10-2018 DY252_17205 120a1f41ab75c9502cd276ae6d621ef4 404 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 2 403 3.7E-213 T 31-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 DY252_17205 120a1f41ab75c9502cd276ae6d621ef4 404 SUPERFAMILY SSF53659 1 402 8.82E-156 T 31-10-2018 DY252_17205 120a1f41ab75c9502cd276ae6d621ef4 404 SMART SM01329 9 395 1.2E-133 T 31-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DY252_17205 120a1f41ab75c9502cd276ae6d621ef4 404 PIRSF PIRSF000108 1 404 4.0E-226 T 31-10-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 DY252_12025 e7cb5d7a3e6768e91ca441fd272b83d7 145 Gene3D G3DSA:1.10.1660.10 1 128 4.0E-26 T 31-10-2018 DY252_12025 e7cb5d7a3e6768e91ca441fd272b83d7 145 SMART SM00422 6 73 2.4E-20 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_12025 e7cb5d7a3e6768e91ca441fd272b83d7 145 SUPERFAMILY SSF46955 6 113 1.32E-24 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_12025 e7cb5d7a3e6768e91ca441fd272b83d7 145 Pfam PF13411 MerR HTH family regulatory protein 6 71 1.3E-14 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_09040 13812dec2e74be4f4e6cfd2821248d1e 132 Pfam PF00410 Ribosomal protein S8 5 132 3.9E-46 T 31-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09040 13812dec2e74be4f4e6cfd2821248d1e 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 30.353 T 31-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09040 13812dec2e74be4f4e6cfd2821248d1e 132 SUPERFAMILY SSF56047 2 132 3.01E-44 T 31-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09040 13812dec2e74be4f4e6cfd2821248d1e 132 Gene3D G3DSA:3.30.1490.10 75 132 5.6E-25 T 31-10-2018 DY252_09040 13812dec2e74be4f4e6cfd2821248d1e 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 31-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09040 13812dec2e74be4f4e6cfd2821248d1e 132 Gene3D G3DSA:3.30.1370.30 2 74 4.0E-23 T 31-10-2018 DY252_03395 b3712d75cb12883afb1de3387d7de7b6 435 Gene3D G3DSA:1.10.287.470 210 287 1.9E-16 T 31-10-2018 DY252_03395 b3712d75cb12883afb1de3387d7de7b6 435 Gene3D G3DSA:1.10.287.470 93 123 2.6E-6 T 31-10-2018 DY252_03395 b3712d75cb12883afb1de3387d7de7b6 435 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 19 435 6.5E-119 T 31-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 DY252_03395 b3712d75cb12883afb1de3387d7de7b6 435 Pfam PF13437 HlyD family secretion protein 288 387 1.2E-15 T 31-10-2018 DY252_03395 b3712d75cb12883afb1de3387d7de7b6 435 Gene3D G3DSA:2.40.50.100 288 324 1.9E-16 T 31-10-2018 DY252_03395 b3712d75cb12883afb1de3387d7de7b6 435 Gene3D G3DSA:2.40.50.100 58 92 2.6E-6 T 31-10-2018 DY252_03395 b3712d75cb12883afb1de3387d7de7b6 435 Gene3D G3DSA:2.40.30.170 325 412 1.9E-16 T 31-10-2018 DY252_03395 b3712d75cb12883afb1de3387d7de7b6 435 Gene3D G3DSA:2.40.30.170 47 57 2.6E-6 T 31-10-2018 DY252_03395 b3712d75cb12883afb1de3387d7de7b6 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 357 380 4.5E-47 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_03395 b3712d75cb12883afb1de3387d7de7b6 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 300 321 4.5E-47 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_03395 b3712d75cb12883afb1de3387d7de7b6 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 414 434 4.5E-47 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_03395 b3712d75cb12883afb1de3387d7de7b6 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 333 357 4.5E-47 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_03395 b3712d75cb12883afb1de3387d7de7b6 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 399 414 4.5E-47 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_03395 b3712d75cb12883afb1de3387d7de7b6 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 71 91 4.5E-47 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_03395 b3712d75cb12883afb1de3387d7de7b6 435 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 29 52 4.5E-47 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_03395 b3712d75cb12883afb1de3387d7de7b6 435 Pfam PF13533 Biotin-lipoyl like 68 97 4.2E-6 T 31-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DY252_05035 aaed67b6b730147f28294fc94fcf53b9 86 Pfam PF01016 Ribosomal L27 protein 2 81 5.8E-37 T 31-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_05035 aaed67b6b730147f28294fc94fcf53b9 86 Gene3D G3DSA:2.40.50.100 20 85 1.0E-28 T 31-10-2018 DY252_05035 aaed67b6b730147f28294fc94fcf53b9 86 SUPERFAMILY SSF110324 2 83 8.72E-33 T 31-10-2018 DY252_05035 aaed67b6b730147f28294fc94fcf53b9 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 31-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_05035 aaed67b6b730147f28294fc94fcf53b9 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 27.862 T 31-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_05035 aaed67b6b730147f28294fc94fcf53b9 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 2.8E-36 T 31-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_05035 aaed67b6b730147f28294fc94fcf53b9 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.2E-33 T 31-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_05035 aaed67b6b730147f28294fc94fcf53b9 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.2E-33 T 31-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_05035 aaed67b6b730147f28294fc94fcf53b9 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.2E-33 T 31-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_05035 aaed67b6b730147f28294fc94fcf53b9 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 83 2.0E-17 T 31-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_04360 dde43217edb25ad0f78424ba9211c540 306 Pfam PF00480 ROK family 3 298 1.1E-60 T 31-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DY252_04360 dde43217edb25ad0f78424ba9211c540 306 Gene3D G3DSA:3.30.420.40 118 287 3.0E-75 T 31-10-2018 DY252_04360 dde43217edb25ad0f78424ba9211c540 306 ProSitePatterns PS01125 ROK family signature. 129 156 - T 31-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DY252_04360 dde43217edb25ad0f78424ba9211c540 306 Gene3D G3DSA:3.30.420.40 5 294 3.0E-75 T 31-10-2018 DY252_04360 dde43217edb25ad0f78424ba9211c540 306 SUPERFAMILY SSF53067 3 299 1.61E-52 T 31-10-2018 DY252_01700 50d3968143f004bfdddb475ab6ea25f2 131 Gene3D G3DSA:3.30.160.250 4 80 1.6E-17 T 31-10-2018 DY252_01700 50d3968143f004bfdddb475ab6ea25f2 131 SUPERFAMILY SSF143100 4 66 4.19E-16 T 31-10-2018 IPR035069 TTHA1013/TTHA0281-like DY252_01700 50d3968143f004bfdddb475ab6ea25f2 131 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 8 120 1.1E-20 T 31-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system DY252_15680 75d2500e613f0390f1909d0896c494c4 107 Pfam PF11747 Killing trait 11 78 1.1E-28 T 31-10-2018 IPR021070 Killing trait, RebB DY252_05235 cd227e3b94d949b5b12f5f96f29f0e35 298 ProSitePatterns PS00770 Aminotransferases class-IV signature. 193 221 - T 31-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 DY252_05235 cd227e3b94d949b5b12f5f96f29f0e35 298 Pfam PF01063 Amino-transferase class IV 40 266 1.9E-48 T 31-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DY252_05235 cd227e3b94d949b5b12f5f96f29f0e35 298 SUPERFAMILY SSF56752 7 291 2.49E-89 T 31-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DY252_05235 cd227e3b94d949b5b12f5f96f29f0e35 298 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 14 293 2.1E-86 T 31-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 DY252_05235 cd227e3b94d949b5b12f5f96f29f0e35 298 Gene3D G3DSA:3.20.10.10 134 291 2.5E-44 T 31-10-2018 DY252_05235 cd227e3b94d949b5b12f5f96f29f0e35 298 Gene3D G3DSA:3.30.470.10 2 130 6.5E-39 T 31-10-2018 DY252_12640 59de8db08de78b56ef3996c27ee99f3e 366 Gene3D G3DSA:1.10.760.10 177 314 7.6E-53 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_12640 59de8db08de78b56ef3996c27ee99f3e 366 SUPERFAMILY SSF46626 24 129 5.36E-35 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_12640 59de8db08de78b56ef3996c27ee99f3e 366 Pfam PF00034 Cytochrome c 27 126 2.7E-7 T 31-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_12640 59de8db08de78b56ef3996c27ee99f3e 366 PRINTS PR00604 Class IA and IB cytochrome C signature 36 43 6.8E-17 T 31-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_12640 59de8db08de78b56ef3996c27ee99f3e 366 PRINTS PR00604 Class IA and IB cytochrome C signature 101 111 6.8E-17 T 31-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_12640 59de8db08de78b56ef3996c27ee99f3e 366 PRINTS PR00604 Class IA and IB cytochrome C signature 49 64 6.8E-17 T 31-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_12640 59de8db08de78b56ef3996c27ee99f3e 366 PRINTS PR00604 Class IA and IB cytochrome C signature 82 98 6.8E-17 T 31-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_12640 59de8db08de78b56ef3996c27ee99f3e 366 PRINTS PR00604 Class IA and IB cytochrome C signature 118 126 6.8E-17 T 31-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_12640 59de8db08de78b56ef3996c27ee99f3e 366 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 201 284 9.6E-7 T 31-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_12640 59de8db08de78b56ef3996c27ee99f3e 366 Gene3D G3DSA:1.10.760.10 13 128 6.1E-39 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_12640 59de8db08de78b56ef3996c27ee99f3e 366 SUPERFAMILY SSF46626 181 293 5.24E-19 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_17310 5cf6310eb1683006bec2d168963b59aa 474 SUPERFAMILY SSF53720 5 472 4.45E-158 T 31-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DY252_17310 5cf6310eb1683006bec2d168963b59aa 474 Gene3D G3DSA:3.40.605.10 25 467 5.4E-169 T 31-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_17310 5cf6310eb1683006bec2d168963b59aa 474 Pfam PF00171 Aldehyde dehydrogenase family 13 471 7.4E-160 T 31-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DY252_17310 5cf6310eb1683006bec2d168963b59aa 474 Gene3D G3DSA:3.40.309.10 249 440 5.4E-169 T 31-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DY252_17310 5cf6310eb1683006bec2d168963b59aa 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 31-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DY252_04690 387145bae3a3154587496dd20d953786 305 Pfam PF03466 LysR substrate binding domain 91 292 4.4E-43 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_04690 387145bae3a3154587496dd20d953786 305 Gene3D G3DSA:1.10.10.10 7 91 1.1E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_04690 387145bae3a3154587496dd20d953786 305 SUPERFAMILY SSF53850 93 293 1.19E-44 T 31-10-2018 DY252_04690 387145bae3a3154587496dd20d953786 305 Gene3D G3DSA:3.40.190.10 164 263 1.4E-59 T 31-10-2018 DY252_04690 387145bae3a3154587496dd20d953786 305 SUPERFAMILY SSF46785 3 83 2.66E-22 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_04690 387145bae3a3154587496dd20d953786 305 Gene3D G3DSA:3.40.190.10 104 290 1.4E-59 T 31-10-2018 DY252_04690 387145bae3a3154587496dd20d953786 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.0E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_04690 387145bae3a3154587496dd20d953786 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.0E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_04690 387145bae3a3154587496dd20d953786 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.0E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_04690 387145bae3a3154587496dd20d953786 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.6E-20 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_07435 913efe79b426a82a7dd0e49dd4ccf203 631 Gene3D G3DSA:3.30.300.30 498 627 7.0E-23 T 31-10-2018 DY252_07435 913efe79b426a82a7dd0e49dd4ccf203 631 ProSitePatterns PS00455 Putative AMP-binding domain signature. 238 249 - T 31-10-2018 IPR020845 AMP-binding, conserved site DY252_07435 913efe79b426a82a7dd0e49dd4ccf203 631 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 5 59 1.8E-24 T 31-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 DY252_07435 913efe79b426a82a7dd0e49dd4ccf203 631 Gene3D G3DSA:3.40.50.12780 31 495 5.4E-103 T 31-10-2018 DY252_07435 913efe79b426a82a7dd0e49dd4ccf203 631 Pfam PF00501 AMP-binding enzyme 67 502 3.3E-83 T 31-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DY252_07435 913efe79b426a82a7dd0e49dd4ccf203 631 Pfam PF13193 AMP-binding enzyme C-terminal domain 512 590 3.5E-23 T 31-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DY252_07435 913efe79b426a82a7dd0e49dd4ccf203 631 SUPERFAMILY SSF56801 5 625 6.02E-158 T 31-10-2018 DY252_13260 b19732327f82a13ce3b524bd38bab9e6 159 Gene3D G3DSA:3.30.70.640 2 159 1.1E-67 T 31-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DY252_13260 b19732327f82a13ce3b524bd38bab9e6 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 5 153 5.5E-62 T 31-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DY252_13260 b19732327f82a13ce3b524bd38bab9e6 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 3 159 35.647 T 31-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DY252_13260 b19732327f82a13ce3b524bd38bab9e6 159 Pfam PF01967 MoaC family 16 151 1.4E-54 T 31-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DY252_13260 b19732327f82a13ce3b524bd38bab9e6 159 SUPERFAMILY SSF55040 12 156 4.84E-60 T 31-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DY252_11540 8be51a6dcfda15942a5c3dda8190915a 389 Gene3D G3DSA:1.10.3720.10 170 384 1.1E-19 T 31-10-2018 IPR035906 MetI-like superfamily DY252_11540 8be51a6dcfda15942a5c3dda8190915a 389 SUPERFAMILY SSF161098 176 374 4.41E-22 T 31-10-2018 IPR035906 MetI-like superfamily DY252_11540 8be51a6dcfda15942a5c3dda8190915a 389 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 37 89 1.4E-12 T 31-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DY252_11540 8be51a6dcfda15942a5c3dda8190915a 389 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 199 386 6.5E-27 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_20325 988082897da927a098b476254c9f1779 375 SUPERFAMILY SSF52540 64 203 6.73E-15 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_20325 988082897da927a098b476254c9f1779 375 Pfam PF03969 AFG1-like ATPase 5 370 6.6E-128 T 31-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 DY252_20325 988082897da927a098b476254c9f1779 375 Gene3D G3DSA:3.40.50.300 56 215 2.9E-21 T 31-10-2018 DY252_14070 3374c4411e6f21492560dbbe8bc3e8fd 178 SUPERFAMILY SSF53271 3 173 3.54E-54 T 31-10-2018 IPR029057 Phosphoribosyltransferase-like DY252_14070 3374c4411e6f21492560dbbe8bc3e8fd 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 9 173 7.7E-67 T 31-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 DY252_14070 3374c4411e6f21492560dbbe8bc3e8fd 178 Pfam PF00156 Phosphoribosyl transferase domain 14 160 1.6E-26 T 31-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DY252_14070 3374c4411e6f21492560dbbe8bc3e8fd 178 Gene3D G3DSA:3.40.50.2020 1 177 4.2E-64 T 31-10-2018 DY252_18205 80477064740f441e5fc6b0e5963c7d5d 315 Gene3D G3DSA:3.40.50.10330 2 122 2.8E-26 T 31-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DY252_18205 80477064740f441e5fc6b0e5963c7d5d 315 Gene3D G3DSA:2.60.200.40 125 282 3.0E-32 T 31-10-2018 DY252_18205 80477064740f441e5fc6b0e5963c7d5d 315 SMART SM00046 5 145 2.0E-8 T 31-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DY252_18205 80477064740f441e5fc6b0e5963c7d5d 315 SUPERFAMILY SSF111331 5 294 3.27E-62 T 31-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DY252_18205 80477064740f441e5fc6b0e5963c7d5d 315 Pfam PF00781 Diacylglycerol kinase catalytic domain 6 109 1.0E-25 T 31-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DY252_18205 80477064740f441e5fc6b0e5963c7d5d 315 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 7 293 1.5E-35 T 31-10-2018 IPR005218 Diacylglycerol/lipid kinase DY252_06205 65755763c92339ed3bd64ebf44ec5e41 413 SUPERFAMILY SSF50022 9 154 2.23E-45 T 31-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DY252_06205 65755763c92339ed3bd64ebf44ec5e41 413 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 176 401 1.7E-37 T 31-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 DY252_06205 65755763c92339ed3bd64ebf44ec5e41 413 Gene3D G3DSA:2.102.10.10 41 159 1.8E-156 T 31-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DY252_06205 65755763c92339ed3bd64ebf44ec5e41 413 SUPERFAMILY SSF55961 155 403 1.49E-49 T 31-10-2018 DY252_06205 65755763c92339ed3bd64ebf44ec5e41 413 Pfam PF00355 Rieske [2Fe-2S] domain 44 124 1.1E-15 T 31-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DY252_06205 65755763c92339ed3bd64ebf44ec5e41 413 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 100 120 5.2E-23 T 31-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DY252_06205 65755763c92339ed3bd64ebf44ec5e41 413 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 176 198 5.2E-23 T 31-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DY252_06205 65755763c92339ed3bd64ebf44ec5e41 413 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 28 53 5.2E-23 T 31-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DY252_06205 65755763c92339ed3bd64ebf44ec5e41 413 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 79 99 5.2E-23 T 31-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DY252_06205 65755763c92339ed3bd64ebf44ec5e41 413 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 58 73 5.2E-23 T 31-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DY252_06205 65755763c92339ed3bd64ebf44ec5e41 413 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 139 165 5.2E-23 T 31-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DY252_06205 65755763c92339ed3bd64ebf44ec5e41 413 Gene3D G3DSA:3.90.380.10 15 397 1.8E-156 T 31-10-2018 DY252_06205 65755763c92339ed3bd64ebf44ec5e41 413 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 86 109 - T 31-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 DY252_17860 d4da428383ed13b50a19daa179d5a5ea 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 261 303 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_17860 d4da428383ed13b50a19daa179d5a5ea 319 Gene3D G3DSA:1.10.10.60 208 311 1.0E-23 T 31-10-2018 DY252_17860 d4da428383ed13b50a19daa179d5a5ea 319 SUPERFAMILY SSF46689 260 310 1.37E-11 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_17860 d4da428383ed13b50a19daa179d5a5ea 319 SUPERFAMILY SSF46689 207 257 1.6E-8 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_17860 d4da428383ed13b50a19daa179d5a5ea 319 SMART SM00342 224 307 3.6E-27 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_17860 d4da428383ed13b50a19daa179d5a5ea 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 291 307 3.1E-5 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_17860 d4da428383ed13b50a19daa179d5a5ea 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 276 291 3.1E-5 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_17860 d4da428383ed13b50a19daa179d5a5ea 319 Pfam PF12833 Helix-turn-helix domain 230 308 2.3E-18 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_17860 d4da428383ed13b50a19daa179d5a5ea 319 Pfam PF12852 Cupin 15 191 1.6E-29 T 31-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain DY252_07875 ee84237327bd779a0561a344e68c63f1 131 Gene3D G3DSA:3.30.1330.40 2 130 7.9E-32 T 31-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DY252_07875 ee84237327bd779a0561a344e68c63f1 131 Pfam PF01042 Endoribonuclease L-PSP 15 128 3.5E-21 T 31-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DY252_07875 ee84237327bd779a0561a344e68c63f1 131 SUPERFAMILY SSF55298 1 130 3.61E-34 T 31-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DY252_22015 be58f6a961ca8f18bba70e81477b7e0f 259 Pfam PF12697 Alpha/beta hydrolase family 37 248 3.3E-16 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_22015 be58f6a961ca8f18bba70e81477b7e0f 259 Gene3D G3DSA:3.40.50.1820 25 257 3.0E-38 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_22015 be58f6a961ca8f18bba70e81477b7e0f 259 SUPERFAMILY SSF53474 36 252 2.87E-29 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_17145 c7807ef7daabc3cec3952e9f8e6946c2 325 SUPERFAMILY SSF103481 38 136 4.71E-9 T 31-10-2018 DY252_17145 c7807ef7daabc3cec3952e9f8e6946c2 325 Pfam PF00892 EamA-like transporter family 4 133 4.0E-8 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_20495 c7e45550595c1c0a27db8965e5ccab24 249 SUPERFAMILY SSF55920 2 246 4.32E-68 T 31-10-2018 IPR036005 Creatinase/aminopeptidase-like DY252_20495 c7e45550595c1c0a27db8965e5ccab24 249 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 1 246 1.2E-78 T 31-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DY252_20495 c7e45550595c1c0a27db8965e5ccab24 249 Hamap MF_01974 Methionine aminopeptidase [map]. 1 248 33.37 T 31-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DY252_20495 c7e45550595c1c0a27db8965e5ccab24 249 Gene3D G3DSA:3.90.230.10 1 248 1.9E-78 T 31-10-2018 DY252_20495 c7e45550595c1c0a27db8965e5ccab24 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 6.0E-19 T 31-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DY252_20495 c7e45550595c1c0a27db8965e5ccab24 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 6.0E-19 T 31-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DY252_20495 c7e45550595c1c0a27db8965e5ccab24 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 88 104 6.0E-19 T 31-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DY252_20495 c7e45550595c1c0a27db8965e5ccab24 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 158 170 6.0E-19 T 31-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DY252_20495 c7e45550595c1c0a27db8965e5ccab24 249 Pfam PF00557 Metallopeptidase family M24 10 239 1.6E-44 T 31-10-2018 IPR000994 Peptidase M24 DY252_04105 91d7613916637df30f18acb5bfa4e665 406 Pfam PF03929 PepSY-associated TM region 10 398 1.7E-52 T 31-10-2018 IPR005625 PepSY-associated TM protein DY252_21200 294b8d6cbc45ffdecc0f11b30203a7ec 708 Gene3D G3DSA:3.90.1530.30 29 102 9.2E-8 T 31-10-2018 DY252_21200 294b8d6cbc45ffdecc0f11b30203a7ec 708 SMART SM00470 14 118 1.8E-6 T 31-10-2018 IPR003115 ParB/Sulfiredoxin DY252_21200 294b8d6cbc45ffdecc0f11b30203a7ec 708 SUPERFAMILY SSF110849 15 120 1.67E-13 T 31-10-2018 IPR036086 ParB/Sulfiredoxin superfamily DY252_21200 294b8d6cbc45ffdecc0f11b30203a7ec 708 Pfam PF02195 ParB-like nuclease domain 16 118 3.3E-9 T 31-10-2018 IPR003115 ParB/Sulfiredoxin DY252_21200 294b8d6cbc45ffdecc0f11b30203a7ec 708 SUPERFAMILY SSF109709 111 205 1.28E-20 T 31-10-2018 DY252_21200 294b8d6cbc45ffdecc0f11b30203a7ec 708 Gene3D G3DSA:1.10.10.2830 107 214 5.0E-16 T 31-10-2018 DY252_10855 292f897f0fbe9e52b763e9bd7cd26f4a 243 Pfam PF04989 Cephalosporin hydroxylase 22 241 9.9E-93 T 31-10-2018 IPR007072 Rhamnosyl O-methyltransferase/Cephalosporin hydroxylase GO:0008168|GO:0008610 DY252_10855 292f897f0fbe9e52b763e9bd7cd26f4a 243 SUPERFAMILY SSF53335 22 240 1.96E-40 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_10855 292f897f0fbe9e52b763e9bd7cd26f4a 243 Gene3D G3DSA:3.40.50.150 36 231 3.7E-35 T 31-10-2018 DY252_20075 251fa6a23d93526493d4eb9ebed6a761 182 SUPERFAMILY SSF48150 5 180 2.83E-74 T 31-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DY252_20075 251fa6a23d93526493d4eb9ebed6a761 182 Pfam PF03352 Methyladenine glycosylase 5 177 2.1E-79 T 31-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 DY252_20075 251fa6a23d93526493d4eb9ebed6a761 182 Gene3D G3DSA:1.10.340.30 2 181 2.0E-76 T 31-10-2018 DY252_01030 88d9217a285542d2cddac7f1bfe57cc5 144 Pfam PF02915 Rubrerythrin 11 133 7.6E-22 T 31-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 DY252_01030 88d9217a285542d2cddac7f1bfe57cc5 144 Gene3D G3DSA:1.20.1260.10 1 137 5.0E-41 T 31-10-2018 IPR012347 Ferritin-like DY252_01030 88d9217a285542d2cddac7f1bfe57cc5 144 SUPERFAMILY SSF47240 3 138 8.55E-34 T 31-10-2018 IPR009078 Ferritin-like superfamily DY252_10415 2951f8744a52866bb624cad9a2908ac2 177 Gene3D G3DSA:1.20.950.20 25 155 2.8E-11 T 31-10-2018 DY252_10415 2951f8744a52866bb624cad9a2908ac2 177 Pfam PF01292 Prokaryotic cytochrome b561 5 166 2.8E-25 T 31-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 DY252_10415 2951f8744a52866bb624cad9a2908ac2 177 SUPERFAMILY SSF81342 2 171 2.67E-36 T 31-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DY252_14570 1b8d8685e34ddb0878248e91f940f636 324 Gene3D G3DSA:3.20.20.140 3 324 1.5E-97 T 31-10-2018 DY252_14570 1b8d8685e34ddb0878248e91f940f636 324 SUPERFAMILY SSF51556 6 323 5.05E-80 T 31-10-2018 IPR032466 Metal-dependent hydrolase DY252_14570 1b8d8685e34ddb0878248e91f940f636 324 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 324 7.5E-106 T 31-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 DY252_14570 1b8d8685e34ddb0878248e91f940f636 324 Pfam PF00962 Adenosine/AMP deaminase 5 322 6.8E-78 T 31-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 DY252_09425 1307bf32657fa9e104cdfd9744f47106 224 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 8 197 2.8E-71 T 31-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 DY252_09425 1307bf32657fa9e104cdfd9744f47106 224 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 8 194 31.549 T 31-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 DY252_09425 1307bf32657fa9e104cdfd9744f47106 224 Gene3D G3DSA:3.40.50.170 2 212 2.5E-80 T 31-10-2018 DY252_09425 1307bf32657fa9e104cdfd9744f47106 224 SUPERFAMILY SSF53328 7 208 9.16E-61 T 31-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DY252_09425 1307bf32657fa9e104cdfd9744f47106 224 Pfam PF00551 Formyl transferase 8 188 3.0E-56 T 31-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DY252_19575 a29dd848b43789ace069ff5d40cf127a 214 Gene3D G3DSA:3.90.79.10 18 204 2.2E-51 T 31-10-2018 DY252_19575 a29dd848b43789ace069ff5d40cf127a 214 SUPERFAMILY SSF55811 35 198 8.53E-37 T 31-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DY252_19575 a29dd848b43789ace069ff5d40cf127a 214 Pfam PF00293 NUDIX domain 47 157 1.4E-13 T 31-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DY252_06875 53ff9369f9870eb3fb360221fd92a946 343 Gene3D G3DSA:3.40.50.720 13 325 1.3E-99 T 31-10-2018 DY252_06875 53ff9369f9870eb3fb360221fd92a946 343 Pfam PF01370 NAD dependent epimerase/dehydratase family 12 247 2.4E-58 T 31-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DY252_06875 53ff9369f9870eb3fb360221fd92a946 343 PRINTS PR01713 Nucleotide sugar epimerase signature 304 321 1.3E-29 T 31-10-2018 DY252_06875 53ff9369f9870eb3fb360221fd92a946 343 PRINTS PR01713 Nucleotide sugar epimerase signature 225 240 1.3E-29 T 31-10-2018 DY252_06875 53ff9369f9870eb3fb360221fd92a946 343 PRINTS PR01713 Nucleotide sugar epimerase signature 265 280 1.3E-29 T 31-10-2018 DY252_06875 53ff9369f9870eb3fb360221fd92a946 343 PRINTS PR01713 Nucleotide sugar epimerase signature 38 54 1.3E-29 T 31-10-2018 DY252_06875 53ff9369f9870eb3fb360221fd92a946 343 SUPERFAMILY SSF51735 10 341 1.71E-92 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_06875 53ff9369f9870eb3fb360221fd92a946 343 Gene3D G3DSA:3.90.25.10 189 337 1.3E-99 T 31-10-2018 DY252_11440 a08f832e084877d6e1975210a6c3fe08 341 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 280 3.9E-108 T 31-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 DY252_11440 a08f832e084877d6e1975210a6c3fe08 341 SMART SM00382 52 249 2.1E-17 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_11440 a08f832e084877d6e1975210a6c3fe08 341 Gene3D G3DSA:3.40.50.300 33 311 9.1E-74 T 31-10-2018 DY252_11440 a08f832e084877d6e1975210a6c3fe08 341 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_11440 a08f832e084877d6e1975210a6c3fe08 341 Pfam PF00005 ABC transporter 43 191 1.2E-30 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_11440 a08f832e084877d6e1975210a6c3fe08 341 SUPERFAMILY SSF52540 42 269 1.21E-73 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_13495 ea7a006d3ea5927890cf059b4990af17 121 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 23 120 2.0E-39 T 31-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13495 ea7a006d3ea5927890cf059b4990af17 121 Gene3D G3DSA:1.20.58.1610 1 121 4.0E-45 T 31-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13495 ea7a006d3ea5927890cf059b4990af17 121 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 4 121 20.265 T 31-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 DY252_07145 7a1e0fe393372c3eef80956c063138eb 125 Gene3D G3DSA:3.10.180.10 1 125 1.1E-35 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_07145 7a1e0fe393372c3eef80956c063138eb 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 123 9.8E-14 T 31-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DY252_07145 7a1e0fe393372c3eef80956c063138eb 125 SUPERFAMILY SSF54593 3 124 5.77E-24 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_09145 224ec3b3b1870e6daebcf345fdd6358a 157 Gene3D G3DSA:3.30.530.20 9 154 1.1E-30 T 31-10-2018 IPR023393 START-like domain superfamily DY252_09145 224ec3b3b1870e6daebcf345fdd6358a 157 SUPERFAMILY SSF55961 9 145 1.41E-21 T 31-10-2018 DY252_20710 ff0a55b1c902c8df3f14f8f25c02d53c 853 SUPERFAMILY SSF51905 8 407 3.05E-42 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_20710 ff0a55b1c902c8df3f14f8f25c02d53c 853 Gene3D G3DSA:3.30.70.1400 515 735 1.6E-77 T 31-10-2018 DY252_20710 ff0a55b1c902c8df3f14f8f25c02d53c 853 SUPERFAMILY SSF103025 436 742 2.04E-68 T 31-10-2018 DY252_20710 ff0a55b1c902c8df3f14f8f25c02d53c 853 Gene3D G3DSA:2.40.30.110 749 836 6.4E-9 T 31-10-2018 DY252_20710 ff0a55b1c902c8df3f14f8f25c02d53c 853 Pfam PF16350 FAD dependent oxidoreductase central domain 385 441 7.5E-15 T 31-10-2018 IPR032503 FAD dependent oxidoreductase, central domain DY252_20710 ff0a55b1c902c8df3f14f8f25c02d53c 853 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 777 835 2.0E-4 T 31-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DY252_20710 ff0a55b1c902c8df3f14f8f25c02d53c 853 Gene3D G3DSA:3.50.50.60 10 401 6.4E-98 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_20710 ff0a55b1c902c8df3f14f8f25c02d53c 853 Gene3D G3DSA:3.30.1360.120 436 713 1.6E-77 T 31-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DY252_20710 ff0a55b1c902c8df3f14f8f25c02d53c 853 SUPERFAMILY SSF101790 789 852 7.36E-10 T 31-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DY252_20710 ff0a55b1c902c8df3f14f8f25c02d53c 853 Pfam PF01571 Aminomethyltransferase folate-binding domain 444 722 3.1E-55 T 31-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain DY252_20710 ff0a55b1c902c8df3f14f8f25c02d53c 853 Pfam PF01266 FAD dependent oxidoreductase 9 382 1.2E-36 T 31-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DY252_20710 ff0a55b1c902c8df3f14f8f25c02d53c 853 Gene3D G3DSA:3.30.9.10 85 345 6.4E-98 T 31-10-2018 DY252_20710 ff0a55b1c902c8df3f14f8f25c02d53c 853 SUPERFAMILY SSF54373 224 342 5.49E-14 T 31-10-2018 DY252_20920 19805cf0609f340cacb9892a47789ff7 373 Pfam PF03743 Bacterial conjugation TrbI-like protein 192 368 5.1E-60 T 31-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI DY252_20920 19805cf0609f340cacb9892a47789ff7 373 Gene3D G3DSA:1.10.1200.160 316 347 2.7E-55 T 31-10-2018 DY252_20920 19805cf0609f340cacb9892a47789ff7 373 Gene3D G3DSA:2.40.128.260 194 366 2.7E-55 T 31-10-2018 DY252_00170 190eade6583a25553ac6adea06a9a8a2 539 ProSitePatterns PS00211 ABC transporters family signature. 423 437 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_00170 190eade6583a25553ac6adea06a9a8a2 539 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_00170 190eade6583a25553ac6adea06a9a8a2 539 Pfam PF00005 ABC transporter 25 182 1.4E-26 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_00170 190eade6583a25553ac6adea06a9a8a2 539 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 262 4.2E-5 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_00170 190eade6583a25553ac6adea06a9a8a2 539 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 502 530 0.024 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_00170 190eade6583a25553ac6adea06a9a8a2 539 SMART SM00382 33 232 8.4E-18 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_00170 190eade6583a25553ac6adea06a9a8a2 539 SMART SM00382 309 508 4.8E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_00170 190eade6583a25553ac6adea06a9a8a2 539 SUPERFAMILY SSF52540 5 254 1.84E-63 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_00170 190eade6583a25553ac6adea06a9a8a2 539 Gene3D G3DSA:3.40.50.300 2 272 1.4E-82 T 31-10-2018 DY252_00170 190eade6583a25553ac6adea06a9a8a2 539 Gene3D G3DSA:3.40.50.300 273 538 1.3E-84 T 31-10-2018 DY252_00170 190eade6583a25553ac6adea06a9a8a2 539 Pfam PF00005 ABC transporter 301 450 9.7E-29 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_00170 190eade6583a25553ac6adea06a9a8a2 539 SUPERFAMILY SSF52540 275 522 4.66E-74 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_09445 364586d3738da41d6c235bfd04802bd1 240 Pfam PF00308 Bacterial dnaA protein 102 207 5.8E-10 T 31-10-2018 IPR013317 Chromosomal replication initiator protein DnaA DY252_09445 364586d3738da41d6c235bfd04802bd1 240 Gene3D G3DSA:3.40.50.300 5 166 1.2E-19 T 31-10-2018 DY252_09445 364586d3738da41d6c235bfd04802bd1 240 Gene3D G3DSA:1.10.8.60 169 234 1.4E-10 T 31-10-2018 DY252_09445 364586d3738da41d6c235bfd04802bd1 240 SUPERFAMILY SSF52540 25 211 1.33E-15 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_04210 220d1af19a1ad983bbd7720e0a7512f3 426 TIGRFAM TIGR01751 crot-CoA-red: crotonyl-CoA carboxylase/reductase 30 420 8.0E-186 T 31-10-2018 IPR010085 Crotonyl-CoA reductase GO:0043880 KEGG: 00650+1.3.1.86 DY252_04210 220d1af19a1ad983bbd7720e0a7512f3 426 Gene3D G3DSA:3.90.180.10 18 416 4.4E-195 T 31-10-2018 DY252_04210 220d1af19a1ad983bbd7720e0a7512f3 426 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 65 176 2.5E-14 T 31-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DY252_04210 220d1af19a1ad983bbd7720e0a7512f3 426 SUPERFAMILY SSF51735 181 372 9.92E-34 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_04210 220d1af19a1ad983bbd7720e0a7512f3 426 Gene3D G3DSA:3.40.50.720 198 357 4.4E-195 T 31-10-2018 DY252_04210 220d1af19a1ad983bbd7720e0a7512f3 426 SUPERFAMILY SSF50129 38 204 7.55E-33 T 31-10-2018 IPR011032 GroES-like superfamily DY252_04210 220d1af19a1ad983bbd7720e0a7512f3 426 SMART SM00829 49 408 1.1E-7 T 31-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DY252_04210 220d1af19a1ad983bbd7720e0a7512f3 426 Pfam PF00107 Zinc-binding dehydrogenase 222 371 1.3E-37 T 31-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DY252_13165 251d87c1f8f43ad1c0dab2d9778d79c9 165 Gene3D G3DSA:3.90.950.20 1 164 1.9E-57 T 31-10-2018 IPR036653 CinA-like, C-terminal DY252_13165 251d87c1f8f43ad1c0dab2d9778d79c9 165 Pfam PF02464 Competence-damaged protein 11 163 3.0E-53 T 31-10-2018 IPR008136 CinA, C-terminal DY252_13165 251d87c1f8f43ad1c0dab2d9778d79c9 165 SUPERFAMILY SSF142433 4 163 1.44E-52 T 31-10-2018 IPR036653 CinA-like, C-terminal DY252_13165 251d87c1f8f43ad1c0dab2d9778d79c9 165 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 163 3.8E-43 T 31-10-2018 IPR008136 CinA, C-terminal DY252_12160 a531c518c5abf0cabfa9a57a656a369a 132 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 75 1.9E-19 T 31-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 DY252_12160 a531c518c5abf0cabfa9a57a656a369a 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 4.3E-11 T 31-10-2018 DY252_12160 a531c518c5abf0cabfa9a57a656a369a 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 4.3E-11 T 31-10-2018 DY252_12160 a531c518c5abf0cabfa9a57a656a369a 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 4.3E-11 T 31-10-2018 DY252_12160 a531c518c5abf0cabfa9a57a656a369a 132 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 130 13.681 T 31-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 DY252_09880 522cbdfde4c1dd5f4953e147c86ff063 420 Gene3D G3DSA:3.40.50.10180 33 251 5.1E-144 T 31-10-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 DY252_09880 522cbdfde4c1dd5f4953e147c86ff063 420 SUPERFAMILY SSF82544 2 419 3.4E-152 T 31-10-2018 DY252_09880 522cbdfde4c1dd5f4953e147c86ff063 420 Gene3D G3DSA:3.40.1480.10 252 414 5.1E-144 T 31-10-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily DY252_09880 522cbdfde4c1dd5f4953e147c86ff063 420 Pfam PF13660 Domain of unknown function (DUF4147) 8 228 4.2E-82 T 31-10-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 DY252_09880 522cbdfde4c1dd5f4953e147c86ff063 420 Pfam PF05161 MOFRL family 307 413 1.1E-38 T 31-10-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 DY252_01515 0ec0b8bfa125e1b60061aef3a84d41e9 346 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 31-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DY252_01515 0ec0b8bfa125e1b60061aef3a84d41e9 346 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 5 345 47.051 T 31-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DY252_01515 0ec0b8bfa125e1b60061aef3a84d41e9 346 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 344 3.0E-112 T 31-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DY252_01515 0ec0b8bfa125e1b60061aef3a84d41e9 346 SUPERFAMILY SSF51726 2 344 8.24E-104 T 31-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DY252_01515 0ec0b8bfa125e1b60061aef3a84d41e9 346 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 21 30 - T 31-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DY252_01515 0ec0b8bfa125e1b60061aef3a84d41e9 346 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 8 342 3.9E-121 T 31-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DY252_01515 0ec0b8bfa125e1b60061aef3a84d41e9 346 Gene3D G3DSA:3.20.20.210 2 346 1.5E-122 T 31-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DY252_13890 eba8584eba3cf0af31d0be5c0a69bffe 643 Pfam PF07244 Surface antigen variable number repeat 251 323 2.4E-4 T 31-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DY252_13890 eba8584eba3cf0af31d0be5c0a69bffe 643 Pfam PF01103 Surface antigen 350 643 2.4E-53 T 31-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 DY252_13890 eba8584eba3cf0af31d0be5c0a69bffe 643 Gene3D G3DSA:2.40.160.50 326 643 2.4E-80 T 31-10-2018 DY252_13890 eba8584eba3cf0af31d0be5c0a69bffe 643 Gene3D G3DSA:3.10.20.310 250 325 2.3E-12 T 31-10-2018 DY252_10250 74a7b9c9460971365a74e88736da6c03 192 Gene3D G3DSA:3.40.630.30 13 191 1.2E-48 T 31-10-2018 DY252_10250 74a7b9c9460971365a74e88736da6c03 192 SUPERFAMILY SSF55729 16 178 1.51E-28 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_10250 74a7b9c9460971365a74e88736da6c03 192 Pfam PF13420 Acetyltransferase (GNAT) domain 16 170 4.0E-20 T 31-10-2018 DY252_07405 c3b19de908eba5ed24f9a66dd2575f6c 278 Pfam PF00990 Diguanylate cyclase, GGDEF domain 116 265 1.1E-12 T 31-10-2018 IPR000160 GGDEF domain DY252_07405 c3b19de908eba5ed24f9a66dd2575f6c 278 Gene3D G3DSA:3.30.70.270 99 271 1.9E-17 T 31-10-2018 DY252_07405 c3b19de908eba5ed24f9a66dd2575f6c 278 SMART SM00267 103 270 1.5E-5 T 31-10-2018 IPR000160 GGDEF domain DY252_07405 c3b19de908eba5ed24f9a66dd2575f6c 278 SUPERFAMILY SSF55073 120 265 1.57E-16 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_01225 1a291962fc35ad64fa70c51e8baa93ba 151 Gene3D G3DSA:1.10.10.10 2 141 4.8E-35 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_01225 1a291962fc35ad64fa70c51e8baa93ba 151 SUPERFAMILY SSF46785 3 134 6.15E-27 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_01225 1a291962fc35ad64fa70c51e8baa93ba 151 Pfam PF02082 Transcriptional regulator 2 83 3.3E-22 T 31-10-2018 IPR000944 Transcription regulator Rrf2-type DY252_01225 1a291962fc35ad64fa70c51e8baa93ba 151 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 131 4.4E-30 T 31-10-2018 IPR000944 Transcription regulator Rrf2-type DY252_00965 fbbd848ad1240d3755f048628098e4b8 217 SUPERFAMILY SSF48008 79 202 2.04E-22 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_00965 fbbd848ad1240d3755f048628098e4b8 217 Pfam PF07729 FCD domain 82 200 4.1E-23 T 31-10-2018 IPR011711 GntR, C-terminal DY252_00965 fbbd848ad1240d3755f048628098e4b8 217 Gene3D G3DSA:1.20.120.530 76 209 4.5E-27 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_00965 fbbd848ad1240d3755f048628098e4b8 217 SMART SM00895 82 202 7.8E-17 T 31-10-2018 IPR011711 GntR, C-terminal DY252_00965 fbbd848ad1240d3755f048628098e4b8 217 SUPERFAMILY SSF46785 1 96 6.23E-19 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_00965 fbbd848ad1240d3755f048628098e4b8 217 Gene3D G3DSA:1.10.10.10 6 73 1.5E-19 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_00965 fbbd848ad1240d3755f048628098e4b8 217 SMART SM00345 14 72 5.2E-14 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_00965 fbbd848ad1240d3755f048628098e4b8 217 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 72 5.4E-17 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_04255 9f69484533c670d9f4281996d584e86f 370 Gene3D G3DSA:3.30.70.1400 59 142 7.6E-82 T 31-10-2018 DY252_04255 9f69484533c670d9f4281996d584e86f 370 SUPERFAMILY SSF103025 8 282 1.18E-87 T 31-10-2018 DY252_04255 9f69484533c670d9f4281996d584e86f 370 Gene3D G3DSA:4.10.1250.10 236 280 3.1E-22 T 31-10-2018 DY252_04255 9f69484533c670d9f4281996d584e86f 370 Gene3D G3DSA:3.30.1360.120 10 235 7.6E-82 T 31-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DY252_04255 9f69484533c670d9f4281996d584e86f 370 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 267 359 8.8E-25 T 31-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DY252_04255 9f69484533c670d9f4281996d584e86f 370 PIRSF PIRSF006487 1 369 4.0E-84 T 31-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DY252_04255 9f69484533c670d9f4281996d584e86f 370 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 9 363 4.4E-109 T 31-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DY252_04255 9f69484533c670d9f4281996d584e86f 370 Gene3D G3DSA:2.40.30.110 282 359 9.1E-29 T 31-10-2018 DY252_04255 9f69484533c670d9f4281996d584e86f 370 SUPERFAMILY SSF101790 275 369 2.94E-26 T 31-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DY252_04255 9f69484533c670d9f4281996d584e86f 370 Pfam PF01571 Aminomethyltransferase folate-binding domain 13 257 4.1E-86 T 31-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain DY252_18350 e6fdff73aef1f59d5acc15c272e08337 403 Pfam PF02417 Chromate transporter 227 396 2.9E-31 T 31-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DY252_18350 e6fdff73aef1f59d5acc15c272e08337 403 Pfam PF02417 Chromate transporter 9 174 7.3E-32 T 31-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DY252_18350 e6fdff73aef1f59d5acc15c272e08337 403 PIRSF PIRSF004810 4 403 2.6E-112 T 31-10-2018 IPR014047 Chromate transporter, long chain DY252_18350 e6fdff73aef1f59d5acc15c272e08337 403 TIGRFAM TIGR00937 2A51: chromate efflux transporter 15 397 4.2E-93 T 31-10-2018 IPR014047 Chromate transporter, long chain DY252_22045 18a2cfc111b000bc9f974147b5f35ff3 323 Gene3D G3DSA:3.55.30.10 2 193 1.2E-56 T 31-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 DY252_22045 18a2cfc111b000bc9f974147b5f35ff3 323 PIRSF PIRSF005261 3 315 4.4E-73 T 31-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DY252_22045 18a2cfc111b000bc9f974147b5f35ff3 323 Gene3D G3DSA:1.10.287.480 206 255 1.5E-9 T 31-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily DY252_22045 18a2cfc111b000bc9f974147b5f35ff3 323 SUPERFAMILY SSF118352 255 313 3.27E-15 T 31-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 DY252_22045 18a2cfc111b000bc9f974147b5f35ff3 323 Pfam PF01430 Hsp33 protein 6 303 4.2E-76 T 31-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DY252_22045 18a2cfc111b000bc9f974147b5f35ff3 323 SUPERFAMILY SSF64397 6 264 5.89E-58 T 31-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 DY252_22045 18a2cfc111b000bc9f974147b5f35ff3 323 Gene3D G3DSA:3.90.1280.10 256 315 5.6E-18 T 31-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 DY252_13145 cdbe4c59bec908a391aed3bb8b2f462e 232 Gene3D G3DSA:1.10.150.240 23 96 1.2E-69 T 31-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DY252_13145 cdbe4c59bec908a391aed3bb8b2f462e 232 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 10 204 1.4E-67 T 31-10-2018 IPR006328 L-2-Haloacid dehalogenase GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 DY252_13145 cdbe4c59bec908a391aed3bb8b2f462e 232 SUPERFAMILY SSF56784 7 222 1.27E-49 T 31-10-2018 IPR036412 HAD-like superfamily DY252_13145 cdbe4c59bec908a391aed3bb8b2f462e 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 35 48 8.2E-39 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_13145 cdbe4c59bec908a391aed3bb8b2f462e 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 8.2E-39 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_13145 cdbe4c59bec908a391aed3bb8b2f462e 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 49 62 8.2E-39 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_13145 cdbe4c59bec908a391aed3bb8b2f462e 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 187 200 8.2E-39 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_13145 cdbe4c59bec908a391aed3bb8b2f462e 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 142 158 8.2E-39 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_13145 cdbe4c59bec908a391aed3bb8b2f462e 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 111 124 8.2E-39 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_13145 cdbe4c59bec908a391aed3bb8b2f462e 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 160 180 8.2E-39 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_13145 cdbe4c59bec908a391aed3bb8b2f462e 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 87 198 4.1E-20 T 31-10-2018 DY252_13145 cdbe4c59bec908a391aed3bb8b2f462e 232 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 12 191 2.0E-36 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_13145 cdbe4c59bec908a391aed3bb8b2f462e 232 Gene3D G3DSA:3.40.50.1000 12 211 1.2E-69 T 31-10-2018 IPR023214 HAD superfamily DY252_15385 cc2ea18acb68b5964c0159e5ca62d05f 633 Gene3D G3DSA:1.10.443.10 231 457 2.4E-12 T 31-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DY252_15385 cc2ea18acb68b5964c0159e5ca62d05f 633 SUPERFAMILY SSF56349 249 451 4.71E-11 T 31-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DY252_11835 5fab0924bf42175c8b17b3f074b703dc 268 SUPERFAMILY SSF53167 3 264 2.88E-79 T 31-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DY252_11835 5fab0924bf42175c8b17b3f074b703dc 268 Gene3D G3DSA:3.40.50.1580 1 266 2.8E-92 T 31-10-2018 DY252_11835 5fab0924bf42175c8b17b3f074b703dc 268 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 21 261 2.1E-83 T 31-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 DY252_11835 5fab0924bf42175c8b17b3f074b703dc 268 PIRSF PIRSF000477 1 266 2.4E-81 T 31-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 DY252_11835 5fab0924bf42175c8b17b3f074b703dc 268 Pfam PF01048 Phosphorylase superfamily 22 264 5.9E-44 T 31-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DY252_02140 9b42bae040ee0bda6f241242edc4efb6 266 Pfam PF01903 CbiX 23 90 3.5E-5 T 31-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 DY252_02140 9b42bae040ee0bda6f241242edc4efb6 266 Gene3D G3DSA:3.40.50.1400 11 234 2.1E-39 T 31-10-2018 DY252_02140 9b42bae040ee0bda6f241242edc4efb6 266 SUPERFAMILY SSF53800 6 223 1.53E-12 T 31-10-2018 DY252_02140 9b42bae040ee0bda6f241242edc4efb6 266 Gene3D G3DSA:3.40.50.1400 100 225 2.1E-39 T 31-10-2018 DY252_08295 4ec34a77f4c8f6b9aee429b3c15683e5 193 SUPERFAMILY SSF46689 1 69 3.03E-15 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_08295 4ec34a77f4c8f6b9aee429b3c15683e5 193 Pfam PF16925 Bacterial transcriptional repressor C-terminal 87 192 2.6E-7 T 31-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DY252_08295 4ec34a77f4c8f6b9aee429b3c15683e5 193 Gene3D G3DSA:1.10.10.60 1 65 4.3E-25 T 31-10-2018 DY252_08295 4ec34a77f4c8f6b9aee429b3c15683e5 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.2E-5 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_08295 4ec34a77f4c8f6b9aee429b3c15683e5 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 4.2E-5 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_08295 4ec34a77f4c8f6b9aee429b3c15683e5 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 8.9E-12 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_08295 4ec34a77f4c8f6b9aee429b3c15683e5 193 SUPERFAMILY SSF48498 79 192 4.45E-25 T 31-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DY252_08295 4ec34a77f4c8f6b9aee429b3c15683e5 193 Gene3D G3DSA:1.10.357.10 68 193 3.3E-28 T 31-10-2018 DY252_09005 8b11a8dc0de52d97f1bdb601f83a3d51 139 Gene3D G3DSA:3.90.1170.10 1 138 7.3E-58 T 31-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 DY252_09005 8b11a8dc0de52d97f1bdb601f83a3d51 139 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.0E-50 T 31-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 DY252_09005 8b11a8dc0de52d97f1bdb601f83a3d51 139 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 8.4E-58 T 31-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_09005 8b11a8dc0de52d97f1bdb601f83a3d51 139 SUPERFAMILY SSF54686 1 134 4.58E-56 T 31-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 DY252_09005 8b11a8dc0de52d97f1bdb601f83a3d51 139 PRINTS PR00060 Ribosomal protein L16 signature 88 117 4.7E-40 T 31-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_09005 8b11a8dc0de52d97f1bdb601f83a3d51 139 PRINTS PR00060 Ribosomal protein L16 signature 42 53 4.7E-40 T 31-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_09005 8b11a8dc0de52d97f1bdb601f83a3d51 139 PRINTS PR00060 Ribosomal protein L16 signature 58 87 4.7E-40 T 31-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_09005 8b11a8dc0de52d97f1bdb601f83a3d51 139 PRINTS PR00060 Ribosomal protein L16 signature 24 36 4.7E-40 T 31-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_09005 8b11a8dc0de52d97f1bdb601f83a3d51 139 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 31-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_09005 8b11a8dc0de52d97f1bdb601f83a3d51 139 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 39.198 T 31-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_20485 5fe9645cbafc5268b0cf8bbd99596429 471 SUPERFAMILY SSF103473 9 380 9.68E-29 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_20485 5fe9645cbafc5268b0cf8bbd99596429 471 Gene3D G3DSA:1.20.1250.20 195 383 7.2E-11 T 31-10-2018 DY252_20485 5fe9645cbafc5268b0cf8bbd99596429 471 Gene3D G3DSA:1.20.1250.20 6 194 2.7E-7 T 31-10-2018 DY252_01525 100869a6e198736e5275c8662299fd44 201 PIRSF PIRSF006305 1 199 9.9E-39 T 31-10-2018 IPR003697 Maf-like protein GO:0047429 DY252_01525 100869a6e198736e5275c8662299fd44 201 Gene3D G3DSA:3.90.950.10 3 199 3.0E-47 T 31-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DY252_01525 100869a6e198736e5275c8662299fd44 201 Pfam PF02545 Maf-like protein 6 194 2.4E-37 T 31-10-2018 IPR003697 Maf-like protein GO:0047429 DY252_01525 100869a6e198736e5275c8662299fd44 201 SUPERFAMILY SSF52972 5 195 5.3E-45 T 31-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DY252_01525 100869a6e198736e5275c8662299fd44 201 Hamap MF_00528 Septum formation protein Maf [maf]. 6 200 22.983 T 31-10-2018 IPR003697 Maf-like protein GO:0047429 DY252_05135 d6f7d987dac565b2e3853240fdfb8790 360 Pfam PF02653 Branched-chain amino acid transport system / permease component 76 349 2.8E-45 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_13910 d11fce329d01281db9666251446d1311 343 Pfam PF01548 Transposase 6 145 1.6E-12 T 31-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DY252_13910 d11fce329d01281db9666251446d1311 343 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 287 1.1E-26 T 31-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DY252_10235 d11fce329d01281db9666251446d1311 343 Pfam PF01548 Transposase 6 145 1.6E-12 T 31-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 DY252_10235 d11fce329d01281db9666251446d1311 343 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 287 1.1E-26 T 31-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 DY252_21755 8fa814e4c4a3b729bf0f45d29fd180b5 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 143 3.0E-51 T 31-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DY252_21755 8fa814e4c4a3b729bf0f45d29fd180b5 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 9 26 - T 31-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DY252_21755 8fa814e4c4a3b729bf0f45d29fd180b5 149 PIRSF PIRSF001399 2 148 4.7E-60 T 31-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DY252_21755 8fa814e4c4a3b729bf0f45d29fd180b5 149 SUPERFAMILY SSF52304 5 146 3.53E-55 T 31-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DY252_21755 8fa814e4c4a3b729bf0f45d29fd180b5 149 Gene3D G3DSA:3.40.50.9100 1 149 8.4E-60 T 31-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DY252_21755 8fa814e4c4a3b729bf0f45d29fd180b5 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 6 139 1.0E-46 T 31-10-2018 DY252_21755 8fa814e4c4a3b729bf0f45d29fd180b5 149 Pfam PF01220 Dehydroquinase class II 5 140 1.9E-57 T 31-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DY252_21755 8fa814e4c4a3b729bf0f45d29fd180b5 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 63.283 T 31-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DY252_21195 aa160bf61f852e8a049ef2b2c28c3a66 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 4.3E-7 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_21195 aa160bf61f852e8a049ef2b2c28c3a66 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 4.3E-7 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_21195 aa160bf61f852e8a049ef2b2c28c3a66 183 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 57 2.3E-14 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_21195 aa160bf61f852e8a049ef2b2c28c3a66 183 SUPERFAMILY SSF48498 79 181 5.17E-10 T 31-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DY252_21195 aa160bf61f852e8a049ef2b2c28c3a66 183 SUPERFAMILY SSF46689 6 70 2.67E-16 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_21195 aa160bf61f852e8a049ef2b2c28c3a66 183 Gene3D G3DSA:1.10.357.10 2 183 6.3E-40 T 31-10-2018 DY252_13310 ae649faf5f8388cf7738080a1d407042 276 Gene3D G3DSA:3.40.140.80 127 269 3.2E-51 T 31-10-2018 DY252_13310 ae649faf5f8388cf7738080a1d407042 276 Gene3D G3DSA:3.40.50.20 1 126 1.3E-38 T 31-10-2018 DY252_13310 ae649faf5f8388cf7738080a1d407042 276 Pfam PF06230 Protein of unknown function (DUF1009) 54 263 1.5E-73 T 31-10-2018 IPR010415 Protein of unknown function DUF1009 KEGG: 00540+3.6.1.54 DY252_16500 627c22bf04dfe70eac1773ea207384f7 306 SUPERFAMILY SSF54506 10 297 2.97E-53 T 31-10-2018 DY252_16500 627c22bf04dfe70eac1773ea207384f7 306 Gene3D G3DSA:3.10.310.10 1 132 6.3E-29 T 31-10-2018 DY252_16500 627c22bf04dfe70eac1773ea207384f7 306 PIRSF PIRSF016184 8 306 7.1E-59 T 31-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DY252_16500 627c22bf04dfe70eac1773ea207384f7 306 Pfam PF02567 Phenazine biosynthesis-like protein 16 284 6.0E-43 T 31-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DY252_16500 627c22bf04dfe70eac1773ea207384f7 306 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 11 296 3.0E-50 T 31-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DY252_16500 627c22bf04dfe70eac1773ea207384f7 306 Gene3D G3DSA:3.10.310.10 133 295 1.2E-36 T 31-10-2018 DY252_05975 a5c400309a6ab478079cb81ef2470f88 273 Pfam PF12679 ABC-2 family transporter protein 6 270 3.9E-39 T 31-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 DY252_18530 09141408dffc65f97e547d32316d8b37 328 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 153 180 - T 31-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DY252_18530 09141408dffc65f97e547d32316d8b37 328 Gene3D G3DSA:3.40.50.720 8 302 3.6E-112 T 31-10-2018 DY252_18530 09141408dffc65f97e547d32316d8b37 328 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 292 5.8E-59 T 31-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DY252_18530 09141408dffc65f97e547d32316d8b37 328 SUPERFAMILY SSF52283 5 138 1.08E-39 T 31-10-2018 DY252_18530 09141408dffc65f97e547d32316d8b37 328 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 17 323 2.3E-34 T 31-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DY252_18530 09141408dffc65f97e547d32316d8b37 328 Gene3D G3DSA:3.40.50.720 105 288 3.6E-112 T 31-10-2018 DY252_18530 09141408dffc65f97e547d32316d8b37 328 SUPERFAMILY SSF51735 105 293 3.88E-61 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_20875 0770ad70cb11f0949cdf3b5f168e6057 91 Gene3D G3DSA:1.20.58.1000 1 90 8.2E-28 T 31-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily DY252_20875 0770ad70cb11f0949cdf3b5f168e6057 91 Pfam PF02583 Metal-sensitive transcriptional repressor 6 88 8.8E-26 T 31-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 DY252_15675 8e8a14a8781232d06747f2449787a84a 445 Pfam PF08281 Sigma-70, region 4 387 439 7.3E-11 T 31-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DY252_15675 8e8a14a8781232d06747f2449787a84a 445 Gene3D G3DSA:1.10.1740.10 273 352 6.6E-12 T 31-10-2018 DY252_15675 8e8a14a8781232d06747f2449787a84a 445 Gene3D G3DSA:1.10.10.10 371 443 3.6E-13 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_15675 8e8a14a8781232d06747f2449787a84a 445 SUPERFAMILY SSF88946 283 357 3.34E-11 T 31-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DY252_15675 8e8a14a8781232d06747f2449787a84a 445 Pfam PF04542 Sigma-70 region 2 289 349 3.5E-7 T 31-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DY252_15675 8e8a14a8781232d06747f2449787a84a 445 SUPERFAMILY SSF88659 369 441 6.54E-11 T 31-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DY252_15675 8e8a14a8781232d06747f2449787a84a 445 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 286 440 1.8E-20 T 31-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DY252_05165 1271d527696c457f805a838c2d81fe69 258 Gene3D G3DSA:1.20.5.100 223 258 4.1E-6 T 31-10-2018 DY252_05165 1271d527696c457f805a838c2d81fe69 258 PRINTS PR00603 Cytochrome C1 signature 35 54 6.4E-71 T 31-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DY252_05165 1271d527696c457f805a838c2d81fe69 258 PRINTS PR00603 Cytochrome C1 signature 100 120 6.4E-71 T 31-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DY252_05165 1271d527696c457f805a838c2d81fe69 258 PRINTS PR00603 Cytochrome C1 signature 133 157 6.4E-71 T 31-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DY252_05165 1271d527696c457f805a838c2d81fe69 258 PRINTS PR00603 Cytochrome C1 signature 183 202 6.4E-71 T 31-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DY252_05165 1271d527696c457f805a838c2d81fe69 258 PRINTS PR00603 Cytochrome C1 signature 203 222 6.4E-71 T 31-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DY252_05165 1271d527696c457f805a838c2d81fe69 258 PRINTS PR00603 Cytochrome C1 signature 55 74 6.4E-71 T 31-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DY252_05165 1271d527696c457f805a838c2d81fe69 258 PRINTS PR00603 Cytochrome C1 signature 172 183 6.4E-71 T 31-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DY252_05165 1271d527696c457f805a838c2d81fe69 258 PRINTS PR00603 Cytochrome C1 signature 222 237 6.4E-71 T 31-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DY252_05165 1271d527696c457f805a838c2d81fe69 258 Gene3D G3DSA:1.10.760.10 28 222 2.5E-88 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_05165 1271d527696c457f805a838c2d81fe69 258 SUPERFAMILY SSF46626 32 220 1.32E-68 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_05165 1271d527696c457f805a838c2d81fe69 258 Pfam PF02167 Cytochrome C1 family 37 256 3.3E-101 T 31-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DY252_05165 1271d527696c457f805a838c2d81fe69 258 SUPERFAMILY SSF81496 222 254 2.88E-5 T 31-10-2018 IPR021157 Cytochrome c1, transmembrane anchor, C-terminal Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DY252_22115 dd6619a9e899fdac1509525b8e753e91 239 Pfam PF01863 Protein of unknown function DUF45 31 227 5.0E-52 T 31-10-2018 IPR002725 Protein of unknown function DUF45 DY252_22115 dd6619a9e899fdac1509525b8e753e91 239 Gene3D G3DSA:3.30.2010.10 140 228 5.5E-15 T 31-10-2018 DY252_11850 c9ae317d080f6763ea7c2836f5ddc86e 272 Gene3D G3DSA:3.40.50.300 13 269 7.9E-65 T 31-10-2018 DY252_11850 c9ae317d080f6763ea7c2836f5ddc86e 272 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_11850 c9ae317d080f6763ea7c2836f5ddc86e 272 SMART SM00382 39 229 9.0E-11 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_11850 c9ae317d080f6763ea7c2836f5ddc86e 272 Pfam PF00005 ABC transporter 30 180 1.4E-33 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_11850 c9ae317d080f6763ea7c2836f5ddc86e 272 SUPERFAMILY SSF52540 14 248 1.69E-59 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_11270 2d81b14ae311bba8adbc98f63af634f2 383 SUPERFAMILY SSF53335 139 369 2.79E-23 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_11270 2d81b14ae311bba8adbc98f63af634f2 383 Gene3D G3DSA:3.40.50.150 130 370 1.1E-22 T 31-10-2018 DY252_19490 461d3b11b95652218596a228a5798b36 216 SMART SM00271 150 208 1.1E-10 T 31-10-2018 IPR001623 DnaJ domain DY252_19490 461d3b11b95652218596a228a5798b36 216 PRINTS PR00625 DnaJ domain signature 153 171 3.5E-7 T 31-10-2018 IPR001623 DnaJ domain DY252_19490 461d3b11b95652218596a228a5798b36 216 PRINTS PR00625 DnaJ domain signature 188 208 3.5E-7 T 31-10-2018 IPR001623 DnaJ domain DY252_19490 461d3b11b95652218596a228a5798b36 216 PRINTS PR00625 DnaJ domain signature 171 186 3.5E-7 T 31-10-2018 IPR001623 DnaJ domain DY252_19490 461d3b11b95652218596a228a5798b36 216 Gene3D G3DSA:1.10.287.110 121 208 4.0E-13 T 31-10-2018 IPR036869 Chaperone J-domain superfamily DY252_19490 461d3b11b95652218596a228a5798b36 216 Pfam PF00226 DnaJ domain 157 204 2.3E-12 T 31-10-2018 IPR001623 DnaJ domain DY252_19490 461d3b11b95652218596a228a5798b36 216 SUPERFAMILY SSF46565 149 205 9.16E-14 T 31-10-2018 IPR036869 Chaperone J-domain superfamily DY252_19100 46a422f67c70a1dbd233e1f4d7385ce0 400 Hamap MF_00372 Imidazolonepropionase [hutI]. 5 398 41.588 T 31-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DY252_19100 46a422f67c70a1dbd233e1f4d7385ce0 400 TIGRFAM TIGR01224 hutI: imidazolonepropionase 21 396 7.4E-138 T 31-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DY252_19100 46a422f67c70a1dbd233e1f4d7385ce0 400 Pfam PF01979 Amidohydrolase family 58 375 2.6E-14 T 31-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DY252_19100 46a422f67c70a1dbd233e1f4d7385ce0 400 Gene3D G3DSA:3.20.20.140 61 358 1.2E-158 T 31-10-2018 DY252_19100 46a422f67c70a1dbd233e1f4d7385ce0 400 SUPERFAMILY SSF51556 60 356 1.39E-85 T 31-10-2018 IPR032466 Metal-dependent hydrolase DY252_19100 46a422f67c70a1dbd233e1f4d7385ce0 400 SUPERFAMILY SSF51338 2 397 8.1E-28 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_19100 46a422f67c70a1dbd233e1f4d7385ce0 400 Gene3D G3DSA:2.30.40.10 5 395 1.2E-158 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_21650 79c70b51153aac5e0b3fd0579d7043e6 205 SUPERFAMILY SSF75217 7 146 2.09E-23 T 31-10-2018 IPR029028 Alpha/beta knot methyltransferases DY252_21650 79c70b51153aac5e0b3fd0579d7043e6 205 Gene3D G3DSA:3.40.1280.10 7 145 5.2E-21 T 31-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DY252_21650 79c70b51153aac5e0b3fd0579d7043e6 205 Pfam PF00588 SpoU rRNA Methylase family 9 139 4.3E-16 T 31-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DY252_10365 22522c9fd5de94930520a0d602dfd989 264 SUPERFAMILY SSF161098 66 250 2.22E-28 T 31-10-2018 IPR035906 MetI-like superfamily DY252_10365 22522c9fd5de94930520a0d602dfd989 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 257 2.2E-23 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_10365 22522c9fd5de94930520a0d602dfd989 264 Gene3D G3DSA:1.10.3720.10 61 258 1.9E-21 T 31-10-2018 IPR035906 MetI-like superfamily DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 SUPERFAMILY SSF51120 143 280 3.14E-12 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 Gene3D G3DSA:2.150.10.10 46 127 7.8E-15 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 Gene3D G3DSA:2.150.10.10 281 433 3.3E-20 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 60 78 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 Gene3D G3DSA:2.150.10.10 2 45 2.5E-6 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 SUPERFAMILY SSF51120 281 418 2.62E-16 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 Gene3D G3DSA:2.150.10.10 215 280 3.6E-12 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 69 87 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 SUPERFAMILY SSF51120 4 151 4.4E-19 T 31-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 243 259 13.0 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 64 79 0.0039 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 326 342 8.7E-4 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 260 277 3.5E-4 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 165 176 38.0 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 301 314 1.3 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 6 23 0.29 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 25 41 2.2 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 81 97 0.059 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 283 293 1.6 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 47 61 0.0087 T 31-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 51 69 - T 31-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 PRINTS PR00313 NodO calcium binding signature 73 81 3.7E-10 T 31-10-2018 DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 PRINTS PR00313 NodO calcium binding signature 52 63 3.7E-10 T 31-10-2018 DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 PRINTS PR00313 NodO calcium binding signature 64 72 3.7E-10 T 31-10-2018 DY252_09340 abf771faf0e3e4e3eb47f52a403281d6 435 PRINTS PR00313 NodO calcium binding signature 194 203 3.7E-10 T 31-10-2018 DY252_11545 4f9f85f339015d839dca99df62fb0140 168 Gene3D G3DSA:3.40.630.30 1 167 2.5E-44 T 31-10-2018 DY252_11545 4f9f85f339015d839dca99df62fb0140 168 SUPERFAMILY SSF55729 5 149 1.39E-31 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_11545 4f9f85f339015d839dca99df62fb0140 168 Pfam PF13302 Acetyltransferase (GNAT) domain 12 147 7.8E-22 T 31-10-2018 IPR000182 GNAT domain DY252_10605 382464f43b4aea205b1e4691146767dc 232 Gene3D G3DSA:3.40.50.1820 1 231 1.1E-61 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_10605 382464f43b4aea205b1e4691146767dc 232 SUPERFAMILY SSF53474 13 231 4.31E-43 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_10605 382464f43b4aea205b1e4691146767dc 232 Pfam PF02230 Phospholipase/Carboxylesterase 18 230 9.5E-38 T 31-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 DY252_21615 f3117970f203cd0c13e2fa5cfcfd2ac5 552 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 362 516 5.9E-30 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_21615 f3117970f203cd0c13e2fa5cfcfd2ac5 552 SMART SM00304 202 255 4.4E-7 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_21615 f3117970f203cd0c13e2fa5cfcfd2ac5 552 SUPERFAMILY SSF58104 230 545 2.22E-63 T 31-10-2018 DY252_21615 f3117970f203cd0c13e2fa5cfcfd2ac5 552 Gene3D G3DSA:1.20.1480.50 163 261 5.7E-15 T 31-10-2018 DY252_21615 f3117970f203cd0c13e2fa5cfcfd2ac5 552 Pfam PF00672 HAMP domain 203 251 3.1E-6 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_21615 f3117970f203cd0c13e2fa5cfcfd2ac5 552 SMART SM00283 292 546 6.6E-36 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_21615 f3117970f203cd0c13e2fa5cfcfd2ac5 552 Gene3D G3DSA:1.10.287.950 263 551 2.8E-54 T 31-10-2018 DY252_05260 2288dee6572de968571a4bead86f3a27 258 Pfam PF00970 Oxidoreductase FAD-binding domain 19 92 3.2E-7 T 31-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DY252_05260 2288dee6572de968571a4bead86f3a27 258 Gene3D G3DSA:2.40.30.10 1 97 3.1E-29 T 31-10-2018 DY252_05260 2288dee6572de968571a4bead86f3a27 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 137 146 1.4E-6 T 31-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DY252_05260 2288dee6572de968571a4bead86f3a27 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 216 224 1.4E-6 T 31-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DY252_05260 2288dee6572de968571a4bead86f3a27 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 52 59 1.4E-6 T 31-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DY252_05260 2288dee6572de968571a4bead86f3a27 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 112 131 1.4E-6 T 31-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DY252_05260 2288dee6572de968571a4bead86f3a27 258 Gene3D G3DSA:3.40.50.80 101 254 2.2E-44 T 31-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DY252_05260 2288dee6572de968571a4bead86f3a27 258 SUPERFAMILY SSF52343 103 256 1.57E-41 T 31-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DY252_05260 2288dee6572de968571a4bead86f3a27 258 SUPERFAMILY SSF63380 6 100 3.05E-25 T 31-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DY252_05260 2288dee6572de968571a4bead86f3a27 258 Pfam PF00175 Oxidoreductase NAD-binding domain 113 231 7.4E-11 T 31-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DY252_07840 a494247a36493c961e2dc196ee158b69 282 SUPERFAMILY SSF140959 24 282 6.8E-102 T 31-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 DY252_07840 a494247a36493c961e2dc196ee158b69 282 Gene3D G3DSA:1.20.58.480 22 282 3.6E-96 T 31-10-2018 DY252_07840 a494247a36493c961e2dc196ee158b69 282 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 18 282 3.5E-127 T 31-10-2018 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11 DY252_07840 a494247a36493c961e2dc196ee158b69 282 Pfam PF03301 Tryptophan 2,3-dioxygenase 11 206 1.7E-45 T 31-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 DY252_07840 a494247a36493c961e2dc196ee158b69 282 Pfam PF03301 Tryptophan 2,3-dioxygenase 208 282 6.0E-26 T 31-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 DY252_07840 a494247a36493c961e2dc196ee158b69 282 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 18 282 40.405 T 31-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 DY252_04915 6cef81f098e60a924e61a01131588732 142 Gene3D G3DSA:1.10.60.10 86 140 4.7E-23 T 31-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 DY252_04915 6cef81f098e60a924e61a01131588732 142 SUPERFAMILY SSF46785 39 111 2.33E-14 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_04915 6cef81f098e60a924e61a01131588732 142 Gene3D G3DSA:1.10.10.10 15 85 7.6E-21 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_04915 6cef81f098e60a924e61a01131588732 142 SMART SM00529 47 142 4.7E-28 T 31-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 DY252_04915 6cef81f098e60a924e61a01131588732 142 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 27 82 4.1E-12 T 31-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 DY252_04915 6cef81f098e60a924e61a01131588732 142 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 86 134 1.5E-13 T 31-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 DY252_04915 6cef81f098e60a924e61a01131588732 142 SMART SM00347 21 116 5.8E-4 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_08615 cde52aaeb3338aa753c9b4e492a2ef03 219 Gene3D G3DSA:1.10.3720.10 7 217 7.3E-50 T 31-10-2018 IPR035906 MetI-like superfamily DY252_08615 cde52aaeb3338aa753c9b4e492a2ef03 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 111 8.7E-24 T 31-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DY252_08615 cde52aaeb3338aa753c9b4e492a2ef03 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 217 2.7E-21 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_08615 cde52aaeb3338aa753c9b4e492a2ef03 219 SUPERFAMILY SSF161098 17 202 3.14E-42 T 31-10-2018 IPR035906 MetI-like superfamily DY252_03855 f257c7ad5e31685ec8d6383ab2c028ad 1521 Gene3D G3DSA:3.60.20.10 43 463 2.4E-161 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_03855 f257c7ad5e31685ec8d6383ab2c028ad 1521 Pfam PF01493 GXGXG motif 1274 1461 9.1E-77 T 31-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 DY252_03855 f257c7ad5e31685ec8d6383ab2c028ad 1521 Gene3D G3DSA:3.20.20.70 822 1234 2.9E-180 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_03855 f257c7ad5e31685ec8d6383ab2c028ad 1521 Pfam PF04898 Glutamate synthase central domain 490 772 1.1E-97 T 31-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 DY252_03855 f257c7ad5e31685ec8d6383ab2c028ad 1521 Pfam PF00310 Glutamine amidotransferases class-II 43 461 2.3E-154 T 31-10-2018 IPR017932 Glutamine amidotransferase type 2 domain DY252_03855 f257c7ad5e31685ec8d6383ab2c028ad 1521 Gene3D G3DSA:2.160.20.60 1247 1520 6.9E-111 T 31-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 DY252_03855 f257c7ad5e31685ec8d6383ab2c028ad 1521 SUPERFAMILY SSF56235 43 464 5.33E-143 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_03855 f257c7ad5e31685ec8d6383ab2c028ad 1521 SUPERFAMILY SSF69336 1246 1508 9.02E-92 T 31-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 DY252_03855 f257c7ad5e31685ec8d6383ab2c028ad 1521 Gene3D G3DSA:3.20.20.70 467 821 7.4E-125 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_03855 f257c7ad5e31685ec8d6383ab2c028ad 1521 Pfam PF01645 Conserved region in glutamate synthase 835 1196 7.0E-155 T 31-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 DY252_03855 f257c7ad5e31685ec8d6383ab2c028ad 1521 SUPERFAMILY SSF51395 478 1233 5.95E-257 T 31-10-2018 DY252_12340 84b59031c6d07f4dadf33832c737869b 228 SUPERFAMILY SSF52833 13 225 4.05E-45 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_12340 84b59031c6d07f4dadf33832c737869b 228 Pfam PF01323 DSBA-like thioredoxin domain 17 218 1.1E-38 T 31-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 DY252_12340 84b59031c6d07f4dadf33832c737869b 228 Gene3D G3DSA:3.40.30.10 6 221 8.2E-63 T 31-10-2018 DY252_01285 6cfe515b2f07d12c7a98a37491ba99cd 216 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 213 8.0E-59 T 31-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DY252_01285 6cfe515b2f07d12c7a98a37491ba99cd 216 PIRSF PIRSF000495 1 216 6.0E-67 T 31-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DY252_01285 6cfe515b2f07d12c7a98a37491ba99cd 216 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 214 33.173 T 31-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DY252_01285 6cfe515b2f07d12c7a98a37491ba99cd 216 SUPERFAMILY SSF52317 3 205 1.11E-51 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_01285 6cfe515b2f07d12c7a98a37491ba99cd 216 Gene3D G3DSA:3.40.50.880 1 215 1.2E-64 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_01285 6cfe515b2f07d12c7a98a37491ba99cd 216 Pfam PF00117 Glutamine amidotransferase class-I 14 205 4.7E-19 T 31-10-2018 IPR017926 Glutamine amidotransferase DY252_19395 3747e80646dd80c95b7895f78ecbb407 211 SMART SM01120 33 207 3.7E-39 T 31-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DY252_19395 3747e80646dd80c95b7895f78ecbb407 211 Gene3D G3DSA:1.25.40.340 2 211 1.5E-42 T 31-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DY252_19395 3747e80646dd80c95b7895f78ecbb407 211 Pfam PF02734 DAK2 domain 33 206 4.8E-36 T 31-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DY252_19395 3747e80646dd80c95b7895f78ecbb407 211 SUPERFAMILY SSF101473 4 209 8.76E-39 T 31-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DY252_03280 9df424d025ef0d9a9084ee1ceb62c84f 236 PIRSF PIRSF009467 9 236 3.9E-63 T 31-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 DY252_03280 9df424d025ef0d9a9084ee1ceb62c84f 236 Hamap MF_01385 Urease accessory protein UreF [ureF]. 12 236 30.578 T 31-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 DY252_03280 9df424d025ef0d9a9084ee1ceb62c84f 236 Gene3D G3DSA:1.10.4190.10 10 214 2.6E-52 T 31-10-2018 IPR038277 UreF domain superfamily DY252_03280 9df424d025ef0d9a9084ee1ceb62c84f 236 Pfam PF01730 UreF 44 193 2.1E-34 T 31-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 DY252_21600 ff39780d0cbda5105ae9708e2341ae56 385 Gene3D G3DSA:2.120.10.30 116 383 1.2E-19 T 31-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DY252_21600 ff39780d0cbda5105ae9708e2341ae56 385 SUPERFAMILY SSF50952 56 383 1.57E-24 T 31-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 DY252_21600 ff39780d0cbda5105ae9708e2341ae56 385 Pfam PF07995 Glucose / Sorbosone dehydrogenase 149 373 2.1E-13 T 31-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase DY252_15800 56f54876025040a28b28da2d42455085 40 Pfam PF10617 Protein of unknown function (DUF2474) 7 40 4.4E-8 T 31-10-2018 IPR018895 Protein of unknown function DUF2474 DY252_13800 dc2bd129e894e5f3b362120939a12be8 365 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_13800 dc2bd129e894e5f3b362120939a12be8 365 SMART SM00382 32 215 2.2E-16 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_13800 dc2bd129e894e5f3b362120939a12be8 365 Pfam PF08402 TOBE domain 285 360 1.3E-8 T 31-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DY252_13800 dc2bd129e894e5f3b362120939a12be8 365 SUPERFAMILY SSF52540 8 245 1.64E-86 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_13800 dc2bd129e894e5f3b362120939a12be8 365 Gene3D G3DSA:3.40.50.300 7 225 2.4E-65 T 31-10-2018 DY252_13800 dc2bd129e894e5f3b362120939a12be8 365 Gene3D G3DSA:2.40.50.940 226 359 6.6E-13 T 31-10-2018 DY252_13800 dc2bd129e894e5f3b362120939a12be8 365 Gene3D G3DSA:2.40.50.140 291 352 6.6E-13 T 31-10-2018 DY252_13800 dc2bd129e894e5f3b362120939a12be8 365 SUPERFAMILY SSF50331 241 360 5.95E-11 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_13800 dc2bd129e894e5f3b362120939a12be8 365 Pfam PF00005 ABC transporter 24 165 4.7E-32 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_21585 49e4bfd8724e7bdd4d2f4e55522ade4c 152 Gene3D G3DSA:3.10.180.10 1 121 6.5E-40 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_21585 49e4bfd8724e7bdd4d2f4e55522ade4c 152 SUPERFAMILY SSF54593 5 115 7.81E-13 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_21585 49e4bfd8724e7bdd4d2f4e55522ade4c 152 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 112 1.0E-4 T 31-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DY252_08005 3ee73d249a1874fef5d7304cfad4252b 275 Pfam PF00005 ABC transporter 28 178 1.9E-32 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_08005 3ee73d249a1874fef5d7304cfad4252b 275 SUPERFAMILY SSF52540 10 239 2.88E-59 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_08005 3ee73d249a1874fef5d7304cfad4252b 275 SMART SM00382 36 226 2.3E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_08005 3ee73d249a1874fef5d7304cfad4252b 275 Gene3D G3DSA:3.40.50.300 2 245 1.2E-58 T 31-10-2018 DY252_06635 d8b2cd4b895ac6df73e0aba495589b4f 362 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 53 361 2.4E-92 T 31-10-2018 IPR018707 Protein of unknown function DUF2219 DY252_06635 d8b2cd4b895ac6df73e0aba495589b4f 362 Gene3D G3DSA:2.40.128.140 39 362 6.5E-82 T 31-10-2018 IPR037107 Putative outer membrane protein superfamily DY252_11130 2daab704d055915165be474e4d588243 367 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 259 349 9.7E-20 T 31-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DY252_11130 2daab704d055915165be474e4d588243 367 SMART SM00833 259 353 6.7E-22 T 31-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DY252_11130 2daab704d055915165be474e4d588243 367 SUPERFAMILY SSF90002 259 350 1.83E-20 T 31-10-2018 DY252_11130 2daab704d055915165be474e4d588243 367 Gene3D G3DSA:3.30.1220.10 238 353 2.0E-22 T 31-10-2018 IPR036627 CobW-like, C-terminal domain superfamily DY252_11130 2daab704d055915165be474e4d588243 367 SUPERFAMILY SSF52540 10 190 1.74E-34 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_11130 2daab704d055915165be474e4d588243 367 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 13 193 9.7E-47 T 31-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DY252_11130 2daab704d055915165be474e4d588243 367 Gene3D G3DSA:3.40.50.300 8 212 5.2E-63 T 31-10-2018 DY252_14215 1e180fc163e86b5492cff9986836dfa1 441 PIRSF PIRSF006066 7 441 2.5E-68 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_14215 1e180fc163e86b5492cff9986836dfa1 441 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 436 1.4E-93 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_14215 1e180fc163e86b5492cff9986836dfa1 441 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 13 431 4.4E-88 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_14130 a6679681122a2b184762bfa4bbbcba75 187 Pfam PF01381 Helix-turn-helix 13 64 4.9E-13 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_14130 a6679681122a2b184762bfa4bbbcba75 187 Gene3D G3DSA:2.60.120.10 96 186 6.8E-6 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_14130 a6679681122a2b184762bfa4bbbcba75 187 Gene3D G3DSA:1.10.260.40 2 81 2.4E-17 T 31-10-2018 DY252_14130 a6679681122a2b184762bfa4bbbcba75 187 SUPERFAMILY SSF51182 60 184 3.14E-13 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_14130 a6679681122a2b184762bfa4bbbcba75 187 SMART SM00530 12 67 6.6E-15 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_14130 a6679681122a2b184762bfa4bbbcba75 187 SUPERFAMILY SSF47413 6 71 4.86E-16 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_22020 cbf9c5ba67fcbd7d3fdcbb708a612888 496 Pfam PF01740 STAS domain 404 486 4.5E-8 T 31-10-2018 IPR002645 STAS domain DY252_22020 cbf9c5ba67fcbd7d3fdcbb708a612888 496 Gene3D G3DSA:3.30.750.24 388 485 2.1E-30 T 31-10-2018 IPR036513 STAS domain superfamily DY252_22020 cbf9c5ba67fcbd7d3fdcbb708a612888 496 SUPERFAMILY SSF52091 399 485 4.91E-11 T 31-10-2018 IPR036513 STAS domain superfamily DY252_22020 cbf9c5ba67fcbd7d3fdcbb708a612888 496 Pfam PF00916 Sulfate permease family 162 358 3.5E-29 T 31-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 DY252_22020 cbf9c5ba67fcbd7d3fdcbb708a612888 496 Pfam PF00916 Sulfate permease family 18 147 5.9E-28 T 31-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 DY252_19455 187bbcbb5c2ff91e8f56d37a438daeb5 188 Gene3D G3DSA:3.30.40.60 74 164 8.2E-22 T 31-10-2018 DY252_19455 187bbcbb5c2ff91e8f56d37a438daeb5 188 SMART SM00507 79 132 7.7E-11 T 31-10-2018 IPR003615 HNH nuclease DY252_19455 187bbcbb5c2ff91e8f56d37a438daeb5 188 Pfam PF14279 HNH endonuclease 92 139 6.2E-17 T 31-10-2018 IPR029471 HNH endonuclease 5 DY252_12275 5403bf53d5ba34c684abb508c85642c3 284 Gene3D G3DSA:1.10.3720.10 2 277 4.3E-50 T 31-10-2018 IPR035906 MetI-like superfamily DY252_12275 5403bf53d5ba34c684abb508c85642c3 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 279 2.5E-14 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_12275 5403bf53d5ba34c684abb508c85642c3 284 SUPERFAMILY SSF161098 4 280 6.41E-54 T 31-10-2018 IPR035906 MetI-like superfamily DY252_04520 aeee3cf937e5c1b5b0d9a815ad1dc6bd 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 31-10-2018 IPR020845 AMP-binding, conserved site DY252_04520 aeee3cf937e5c1b5b0d9a815ad1dc6bd 649 Gene3D G3DSA:3.40.50.12780 325 468 1.4E-32 T 31-10-2018 DY252_04520 aeee3cf937e5c1b5b0d9a815ad1dc6bd 649 Pfam PF00501 AMP-binding enzyme 24 474 3.3E-74 T 31-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DY252_04520 aeee3cf937e5c1b5b0d9a815ad1dc6bd 649 SUPERFAMILY SSF56801 13 605 5.36E-97 T 31-10-2018 DY252_04520 aeee3cf937e5c1b5b0d9a815ad1dc6bd 649 Gene3D G3DSA:3.40.50.12780 8 313 3.8E-38 T 31-10-2018 DY252_04125 c7ffeb45038fd136058bf974d48b3963 307 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 3 299 8.5E-91 T 31-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DY252_04125 c7ffeb45038fd136058bf974d48b3963 307 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 247 260 - T 31-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DY252_04125 c7ffeb45038fd136058bf974d48b3963 307 Hamap MF_01987 Ribokinase [rbsK]. 1 302 22.537 T 31-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DY252_04125 c7ffeb45038fd136058bf974d48b3963 307 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 37 61 - T 31-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DY252_04125 c7ffeb45038fd136058bf974d48b3963 307 Pfam PF00294 pfkB family carbohydrate kinase 3 294 1.7E-67 T 31-10-2018 IPR011611 Carbohydrate kinase PfkB DY252_04125 c7ffeb45038fd136058bf974d48b3963 307 Gene3D G3DSA:3.40.1190.20 1 304 2.7E-92 T 31-10-2018 IPR029056 Ribokinase-like DY252_04125 c7ffeb45038fd136058bf974d48b3963 307 PRINTS PR00990 Ribokinase signature 218 229 3.7E-27 T 31-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DY252_04125 c7ffeb45038fd136058bf974d48b3963 307 PRINTS PR00990 Ribokinase signature 104 117 3.7E-27 T 31-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DY252_04125 c7ffeb45038fd136058bf974d48b3963 307 PRINTS PR00990 Ribokinase signature 174 189 3.7E-27 T 31-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DY252_04125 c7ffeb45038fd136058bf974d48b3963 307 PRINTS PR00990 Ribokinase signature 32 51 3.7E-27 T 31-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DY252_04125 c7ffeb45038fd136058bf974d48b3963 307 PRINTS PR00990 Ribokinase signature 5 26 3.7E-27 T 31-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DY252_04125 c7ffeb45038fd136058bf974d48b3963 307 SUPERFAMILY SSF53613 1 303 7.64E-79 T 31-10-2018 IPR029056 Ribokinase-like DY252_09780 1dc8cbbc3fc5eca88efd9eb14d8de983 90 SMART SM00530 6 63 8.0E-6 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_09780 1dc8cbbc3fc5eca88efd9eb14d8de983 90 Gene3D G3DSA:1.10.260.40 1 80 8.7E-19 T 31-10-2018 DY252_09780 1dc8cbbc3fc5eca88efd9eb14d8de983 90 Pfam PF01381 Helix-turn-helix 7 56 3.8E-8 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_09780 1dc8cbbc3fc5eca88efd9eb14d8de983 90 SUPERFAMILY SSF47413 4 66 1.38E-8 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_11515 b1815bd587b735049406496243aeb05e 252 Gene3D G3DSA:3.20.20.370 4 242 1.8E-9 T 31-10-2018 DY252_11515 b1815bd587b735049406496243aeb05e 252 SUPERFAMILY SSF88713 38 232 2.8E-9 T 31-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DY252_16480 8e1c6f8292b724a88837e88caa791fe1 194 PIRSF PIRSF033239 1 194 7.7E-50 T 31-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD DY252_16480 8e1c6f8292b724a88837e88caa791fe1 194 Pfam PF06055 Exopolysaccharide synthesis, ExoD 10 190 1.3E-43 T 31-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD DY252_22140 79f55a12b960e7234329823f15f9bfd7 500 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 19 433 4.0E-125 T 31-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane DY252_07315 d612a90e123a43dce716d8bbef3e8246 140 SUPERFAMILY SSF52540 9 137 2.52E-16 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07315 d612a90e123a43dce716d8bbef3e8246 140 Pfam PF13671 AAA domain 11 111 1.9E-16 T 31-10-2018 DY252_07315 d612a90e123a43dce716d8bbef3e8246 140 Gene3D G3DSA:3.40.50.300 9 135 7.0E-24 T 31-10-2018 DY252_06460 2687bc7bb890e62d3be8a4780d118850 469 Gene3D G3DSA:3.40.1190.10 97 316 2.0E-74 T 31-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DY252_06460 2687bc7bb890e62d3be8a4780d118850 469 Pfam PF08245 Mur ligase middle domain 113 299 1.1E-26 T 31-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DY252_06460 2687bc7bb890e62d3be8a4780d118850 469 Pfam PF01225 Mur ligase family, catalytic domain 10 107 2.4E-29 T 31-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DY252_06460 2687bc7bb890e62d3be8a4780d118850 469 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 11 459 1.7E-163 T 31-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_06460 2687bc7bb890e62d3be8a4780d118850 469 SUPERFAMILY SSF51984 10 95 1.22E-28 T 31-10-2018 DY252_06460 2687bc7bb890e62d3be8a4780d118850 469 Pfam PF02875 Mur ligase family, glutamate ligase domain 319 404 1.1E-21 T 31-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DY252_06460 2687bc7bb890e62d3be8a4780d118850 469 SUPERFAMILY SSF53623 94 316 3.27E-66 T 31-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DY252_06460 2687bc7bb890e62d3be8a4780d118850 469 Gene3D G3DSA:3.90.190.20 317 468 2.3E-52 T 31-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DY252_06460 2687bc7bb890e62d3be8a4780d118850 469 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 8 466 41.738 T 31-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_06460 2687bc7bb890e62d3be8a4780d118850 469 Gene3D G3DSA:3.40.50.720 10 96 1.2E-32 T 31-10-2018 DY252_06460 2687bc7bb890e62d3be8a4780d118850 469 SUPERFAMILY SSF53244 318 462 3.48E-47 T 31-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DY252_06010 a83096538a9998ce653c2faeac451e8f 326 SUPERFAMILY SSF51735 1 315 2.95E-54 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_06010 a83096538a9998ce653c2faeac451e8f 326 Gene3D G3DSA:3.90.25.60 171 309 7.4E-80 T 31-10-2018 DY252_06010 a83096538a9998ce653c2faeac451e8f 326 Gene3D G3DSA:3.40.50.720 3 300 7.4E-80 T 31-10-2018 DY252_06010 a83096538a9998ce653c2faeac451e8f 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 250 2.0E-22 T 31-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DY252_16910 7dc9c6f494b87e9a78d270712fb31b69 706 Gene3D G3DSA:3.40.50.300 436 699 2.3E-34 T 31-10-2018 DY252_16910 7dc9c6f494b87e9a78d270712fb31b69 706 SUPERFAMILY SSF52540 510 694 9.09E-24 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_00525 996718c260257efb00ceccec6fe3a167 667 Pfam PF00665 Integrase core domain 253 391 3.5E-19 T 31-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DY252_00525 996718c260257efb00ceccec6fe3a167 667 Gene3D G3DSA:3.30.420.10 249 468 7.6E-36 T 31-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DY252_00525 996718c260257efb00ceccec6fe3a167 667 Pfam PF09299 Mu transposase, C-terminal 478 532 1.1E-7 T 31-10-2018 IPR015378 Transposase-like, Mu, C-terminal DY252_00525 996718c260257efb00ceccec6fe3a167 667 SUPERFAMILY SSF53098 252 450 1.39E-20 T 31-10-2018 IPR012337 Ribonuclease H-like superfamily DY252_21975 d0089a9534ce2804e84c65b370c6955b 688 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 16 437 5.4E-131 T 31-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane DY252_21975 d0089a9534ce2804e84c65b370c6955b 688 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 548 683 4.6E-9 T 31-10-2018 IPR009936 Protein of unknown function DUF1468 DY252_04580 ce42b78d818b25cf9f70606361c59721 89 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 82 1.9E-18 T 31-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 DY252_04580 ce42b78d818b25cf9f70606361c59721 89 PIRSF PIRSF028784 1 89 1.1E-24 T 31-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 DY252_01290 3846a12fc13a0e033076dd0eb266f074 184 SUPERFAMILY SSF55729 17 179 2.84E-26 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_01290 3846a12fc13a0e033076dd0eb266f074 184 Pfam PF00583 Acetyltransferase (GNAT) family 60 153 1.8E-8 T 31-10-2018 IPR000182 GNAT domain DY252_01290 3846a12fc13a0e033076dd0eb266f074 184 Gene3D G3DSA:3.40.630.30 13 182 5.9E-27 T 31-10-2018 DY252_13715 dc2b6673cdbe204dd65153d5253896bd 456 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 256 293 - T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_13715 dc2b6673cdbe204dd65153d5253896bd 456 Gene3D G3DSA:3.90.1150.10 14 446 4.7E-183 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_13715 dc2b6673cdbe204dd65153d5253896bd 456 PIRSF PIRSF000521 135 172 220.0 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_13715 dc2b6673cdbe204dd65153d5253896bd 456 PIRSF PIRSF000521 33 150 8.8E-8 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_13715 dc2b6673cdbe204dd65153d5253896bd 456 PIRSF PIRSF000521 190 449 1.1E-20 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_13715 dc2b6673cdbe204dd65153d5253896bd 456 SUPERFAMILY SSF53383 11 448 8.78E-124 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_13715 dc2b6673cdbe204dd65153d5253896bd 456 Gene3D G3DSA:3.40.640.10 68 343 4.7E-183 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_13715 dc2b6673cdbe204dd65153d5253896bd 456 Pfam PF00202 Aminotransferase class-III 34 443 5.7E-95 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_09545 e78831d0dda41694f53477950cc12cd5 105 Gene3D G3DSA:1.10.10.10 2 102 9.7E-27 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_09545 e78831d0dda41694f53477950cc12cd5 105 SUPERFAMILY SSF46785 8 96 3.05E-25 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_09545 e78831d0dda41694f53477950cc12cd5 105 SMART SM00418 15 93 9.4E-27 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_09545 e78831d0dda41694f53477950cc12cd5 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 1.7E-10 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_09545 e78831d0dda41694f53477950cc12cd5 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 1.7E-10 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_09545 e78831d0dda41694f53477950cc12cd5 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 1.7E-10 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_09545 e78831d0dda41694f53477950cc12cd5 105 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 8.6E-15 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_08170 4d9b5e5c6fc9645990a3a86bca87ba5a 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 31-10-2018 IPR018313 Solute-binding protein family 3, conserved site DY252_08170 4d9b5e5c6fc9645990a3a86bca87ba5a 260 SUPERFAMILY SSF53850 26 256 4.08E-57 T 31-10-2018 DY252_08170 4d9b5e5c6fc9645990a3a86bca87ba5a 260 SMART SM00062 35 255 2.2E-40 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_08170 4d9b5e5c6fc9645990a3a86bca87ba5a 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 253 3.6E-51 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_08170 4d9b5e5c6fc9645990a3a86bca87ba5a 260 Gene3D G3DSA:3.40.190.10 30 247 1.6E-54 T 31-10-2018 DY252_08170 4d9b5e5c6fc9645990a3a86bca87ba5a 260 Gene3D G3DSA:3.40.190.10 122 213 1.6E-54 T 31-10-2018 DY252_08685 bc7afb2880687a7676bfee08b82defc7 429 SUPERFAMILY SSF53474 89 407 1.3E-32 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_08685 bc7afb2880687a7676bfee08b82defc7 429 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 409 8.9E-184 T 31-10-2018 IPR010915 Polyhydroxyalkanoate depolymerase DY252_08685 bc7afb2880687a7676bfee08b82defc7 429 Pfam PF06850 PHB de-polymerase C-terminus 208 409 5.1E-98 T 31-10-2018 IPR009656 PHB de-polymerase, C-terminal DY252_08685 bc7afb2880687a7676bfee08b82defc7 429 PIRSF PIRSF020818 1 420 1.1E-196 T 31-10-2018 IPR010915 Polyhydroxyalkanoate depolymerase DY252_06505 b89263ea61be957b735094fccfcd3246 328 SUPERFAMILY SSF53335 14 316 2.53E-48 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_06505 b89263ea61be957b735094fccfcd3246 328 Gene3D G3DSA:3.40.50.150 15 314 9.8E-105 T 31-10-2018 DY252_06505 b89263ea61be957b735094fccfcd3246 328 Pfam PF01795 MraW methylase family 14 316 1.9E-100 T 31-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DY252_06505 b89263ea61be957b735094fccfcd3246 328 SUPERFAMILY SSF81799 122 220 1.27E-34 T 31-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 DY252_06505 b89263ea61be957b735094fccfcd3246 328 Gene3D G3DSA:1.10.150.170 120 221 9.8E-105 T 31-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 DY252_06505 b89263ea61be957b735094fccfcd3246 328 PIRSF PIRSF004486 9 318 2.4E-104 T 31-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DY252_06505 b89263ea61be957b735094fccfcd3246 328 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 11 316 2.2E-98 T 31-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DY252_06505 b89263ea61be957b735094fccfcd3246 328 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 15 317 37.212 T 31-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DY252_11465 2ab2b4812906474a258186685005bed1 338 SUPERFAMILY SSF53850 26 333 2.52E-78 T 31-10-2018 DY252_11465 2ab2b4812906474a258186685005bed1 338 Gene3D G3DSA:3.40.190.10 27 298 2.3E-125 T 31-10-2018 DY252_11465 2ab2b4812906474a258186685005bed1 338 Gene3D G3DSA:3.40.190.10 122 328 2.3E-125 T 31-10-2018 DY252_11465 2ab2b4812906474a258186685005bed1 338 PIRSF PIRSF002825 4 338 1.5E-91 T 31-10-2018 IPR026045 Ferric binding protein DY252_11465 2ab2b4812906474a258186685005bed1 338 Pfam PF13343 Bacterial extracellular solute-binding protein 72 307 6.2E-23 T 31-10-2018 DY252_04190 86757883f9025e74f9a00ffeecd3aa59 388 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 192 332 3.5E-33 T 31-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DY252_04190 86757883f9025e74f9a00ffeecd3aa59 388 SMART SM00996 2 387 2.3E-19 T 31-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DY252_04190 86757883f9025e74f9a00ffeecd3aa59 388 Gene3D G3DSA:3.40.50.1480 19 385 1.7E-98 T 31-10-2018 DY252_04190 86757883f9025e74f9a00ffeecd3aa59 388 SUPERFAMILY SSF52283 19 385 3.91E-25 T 31-10-2018 DY252_04190 86757883f9025e74f9a00ffeecd3aa59 388 Gene3D G3DSA:3.40.50.720 178 335 1.7E-98 T 31-10-2018 DY252_04190 86757883f9025e74f9a00ffeecd3aa59 388 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 198 214 - T 31-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DY252_04190 86757883f9025e74f9a00ffeecd3aa59 388 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 33 137 5.2E-11 T 31-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DY252_04190 86757883f9025e74f9a00ffeecd3aa59 388 SMART SM00997 176 335 5.7E-49 T 31-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 DY252_04190 86757883f9025e74f9a00ffeecd3aa59 388 SUPERFAMILY SSF51735 176 335 1.13E-39 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_21720 2f4d1d9f50ec6090273ffc4934be20fa 122 Gene3D G3DSA:3.40.30.10 4 98 4.4E-6 T 31-10-2018 DY252_21720 2f4d1d9f50ec6090273ffc4934be20fa 122 Pfam PF07845 Protein of unknown function (DUF1636) 7 120 9.5E-35 T 31-10-2018 IPR012863 Protein of unknown function DUF1636 DY252_21720 2f4d1d9f50ec6090273ffc4934be20fa 122 SUPERFAMILY SSF52833 6 89 1.23E-7 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_05450 4a4ef4b58462292725a08c5ceb1c1f6f 178 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 145 4.1E-19 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_16300 e83a909058933b6fa4ff2aca364b9ce1 264 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 164 5.3E-20 T 31-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DY252_16300 e83a909058933b6fa4ff2aca364b9ce1 264 Gene3D G3DSA:3.40.50.720 1 226 4.0E-60 T 31-10-2018 DY252_16300 e83a909058933b6fa4ff2aca364b9ce1 264 SUPERFAMILY SSF51735 1 232 3.53E-37 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_07815 ee46fcc0152c073800b36824b8404eef 166 SUPERFAMILY SSF46785 18 159 1.44E-31 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_07815 ee46fcc0152c073800b36824b8404eef 166 Gene3D G3DSA:1.10.10.10 9 161 7.1E-36 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_07815 ee46fcc0152c073800b36824b8404eef 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 86 4.7E-12 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_07815 ee46fcc0152c073800b36824b8404eef 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 102 4.7E-12 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_07815 ee46fcc0152c073800b36824b8404eef 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 136 156 4.7E-12 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_07815 ee46fcc0152c073800b36824b8404eef 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 122 4.7E-12 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_07815 ee46fcc0152c073800b36824b8404eef 166 Pfam PF01047 MarR family 53 110 5.0E-13 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_07815 ee46fcc0152c073800b36824b8404eef 166 ProSitePatterns PS01117 MarR-type HTH domain signature. 85 119 - T 31-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DY252_07815 ee46fcc0152c073800b36824b8404eef 166 SMART SM00347 45 146 8.3E-20 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_16405 82c81a09b8b16c43fca35e1d01116fe8 268 Pfam PF12697 Alpha/beta hydrolase family 39 259 5.9E-19 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_16405 82c81a09b8b16c43fca35e1d01116fe8 268 Gene3D G3DSA:3.40.50.1820 26 266 1.1E-45 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_16405 82c81a09b8b16c43fca35e1d01116fe8 268 SUPERFAMILY SSF53474 35 263 2.14E-33 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_14595 7b77c0badefc17da1f3eb698c694b727 208 Gene3D G3DSA:1.10.357.10 19 206 1.3E-38 T 31-10-2018 DY252_14595 7b77c0badefc17da1f3eb698c694b727 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 8.6E-8 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_14595 7b77c0badefc17da1f3eb698c694b727 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 8.6E-8 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_14595 7b77c0badefc17da1f3eb698c694b727 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 5.5E-13 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_14595 7b77c0badefc17da1f3eb698c694b727 208 SUPERFAMILY SSF46689 9 93 4.63E-17 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_15970 5162ea0612d5db3cd2c6a4a92bcd59cf 433 Gene3D G3DSA:3.50.50.60 120 422 1.2E-42 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_15970 5162ea0612d5db3cd2c6a4a92bcd59cf 433 Pfam PF01266 FAD dependent oxidoreductase 17 409 1.4E-52 T 31-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DY252_15970 5162ea0612d5db3cd2c6a4a92bcd59cf 433 Gene3D G3DSA:3.50.50.60 14 77 2.7E-10 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_15970 5162ea0612d5db3cd2c6a4a92bcd59cf 433 Gene3D G3DSA:3.30.9.10 149 369 1.2E-42 T 31-10-2018 DY252_15970 5162ea0612d5db3cd2c6a4a92bcd59cf 433 SUPERFAMILY SSF51905 17 429 6.34E-49 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_15970 5162ea0612d5db3cd2c6a4a92bcd59cf 433 SUPERFAMILY SSF54373 285 370 2.62E-7 T 31-10-2018 DY252_16735 8b210530ebf69d9c7dd98911df0f2553 331 Gene3D G3DSA:3.40.50.1820 16 331 3.5E-103 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_16735 8b210530ebf69d9c7dd98911df0f2553 331 Pfam PF07859 alpha/beta hydrolase fold 94 302 5.4E-73 T 31-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DY252_16735 8b210530ebf69d9c7dd98911df0f2553 331 SUPERFAMILY SSF53474 59 328 3.73E-70 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_19300 1852bbba6e2410aba4e1a113786e541e 282 SUPERFAMILY SSF51569 5 266 1.98E-55 T 31-10-2018 DY252_19300 1852bbba6e2410aba4e1a113786e541e 282 SMART SM01133 18 250 5.1E-6 T 31-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DY252_19300 1852bbba6e2410aba4e1a113786e541e 282 Gene3D G3DSA:3.20.20.70 2 281 2.0E-59 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_19300 1852bbba6e2410aba4e1a113786e541e 282 Pfam PF01791 DeoC/LacD family aldolase 19 250 2.9E-44 T 31-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DY252_19300 1852bbba6e2410aba4e1a113786e541e 282 PIRSF PIRSF038992 1 279 4.7E-68 T 31-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DY252_02050 2c1804313e24453803da9d72640eb49a 313 Pfam PF12146 Serine aminopeptidase, S33 50 286 1.1E-51 T 31-10-2018 IPR022742 Serine aminopeptidase, S33 DY252_02050 2c1804313e24453803da9d72640eb49a 313 Gene3D G3DSA:3.40.50.1820 28 303 1.3E-50 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_02050 2c1804313e24453803da9d72640eb49a 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 127 140 1.1E-10 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_02050 2c1804313e24453803da9d72640eb49a 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 239 253 1.1E-10 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_02050 2c1804313e24453803da9d72640eb49a 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 79 94 1.1E-10 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_02050 2c1804313e24453803da9d72640eb49a 313 SUPERFAMILY SSF53474 28 299 8.31E-38 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_06290 1c431ee8803772f52476ffce243fa130 85 Pfam PF13937 Domain of unknown function (DUF4212) 6 81 3.5E-34 T 31-10-2018 IPR019886 Sodium symporter small subunit, predicted DY252_06290 1c431ee8803772f52476ffce243fa130 85 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 7 83 7.8E-35 T 31-10-2018 IPR019886 Sodium symporter small subunit, predicted DY252_06500 3c7097f4053f5aa2d7345b153cdd02fc 143 ProDom PD201674 DIVISION CELL RP568 MEMBRANE TRANSMEMBRANE FTSL 21 82 0.002 T 31-10-2018 DY252_08435 808dc3ba90ecfd78568f45a33dbe0bdd 171 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 16 161 7.0E-18 T 31-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 DY252_08435 808dc3ba90ecfd78568f45a33dbe0bdd 171 Pfam PF04093 rod shape-determining protein MreD 16 156 1.4E-9 T 31-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 DY252_07235 5853d4cfd3f815ae4d3f40388ba138ab 144 Pfam PF06676 Protein of unknown function (DUF1178) 1 137 3.1E-55 T 31-10-2018 IPR009562 Protein of unknown function DUF1178 DY252_07235 5853d4cfd3f815ae4d3f40388ba138ab 144 PIRSF PIRSF032131 1 143 3.2E-52 T 31-10-2018 IPR009562 Protein of unknown function DUF1178 DY252_01950 55c2c1a58573b7c34e4a86a007f67287 135 Pfam PF09391 Protein of unknown function (DUF2000) 4 134 3.8E-41 T 31-10-2018 IPR018988 Protein of unknown function DUF2000 DY252_01950 55c2c1a58573b7c34e4a86a007f67287 135 SUPERFAMILY SSF102462 1 135 3.5E-43 T 31-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 DY252_01950 55c2c1a58573b7c34e4a86a007f67287 135 Gene3D G3DSA:3.40.1490.10 1 135 4.7E-52 T 31-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 DY252_19045 a90b9041f13d50999fd7595c35e061a9 120 Pfam PF00072 Response regulator receiver domain 1 111 1.3E-26 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_19045 a90b9041f13d50999fd7595c35e061a9 120 Gene3D G3DSA:3.40.50.12740 1 120 6.5E-44 T 31-10-2018 DY252_19045 a90b9041f13d50999fd7595c35e061a9 120 SMART SM00448 1 111 2.7E-34 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_19045 a90b9041f13d50999fd7595c35e061a9 120 SUPERFAMILY SSF52172 1 118 3.56E-38 T 31-10-2018 IPR011006 CheY-like superfamily DY252_09105 912700269106ab26d6fdec3aff82e05f 396 Pfam PF07690 Major Facilitator Superfamily 14 321 3.9E-15 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_09105 912700269106ab26d6fdec3aff82e05f 396 SUPERFAMILY SSF103473 13 390 2.62E-34 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_09105 912700269106ab26d6fdec3aff82e05f 396 Gene3D G3DSA:1.20.1250.20 3 389 8.1E-30 T 31-10-2018 DY252_08390 c0352e261b8c9f04e2aded5f46aca371 536 SUPERFAMILY SSF46689 485 531 2.13E-8 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_08390 c0352e261b8c9f04e2aded5f46aca371 536 SMART SM00382 166 309 2.6E-7 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_08390 c0352e261b8c9f04e2aded5f46aca371 536 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 31-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DY252_08390 c0352e261b8c9f04e2aded5f46aca371 536 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 31-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DY252_08390 c0352e261b8c9f04e2aded5f46aca371 536 Gene3D G3DSA:3.40.50.300 135 317 8.3E-64 T 31-10-2018 DY252_08390 c0352e261b8c9f04e2aded5f46aca371 536 SUPERFAMILY SSF52172 4 191 1.37E-40 T 31-10-2018 IPR011006 CheY-like superfamily DY252_08390 c0352e261b8c9f04e2aded5f46aca371 536 SMART SM00448 5 116 1.2E-30 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_08390 c0352e261b8c9f04e2aded5f46aca371 536 Gene3D G3DSA:1.10.8.60 318 396 8.5E-23 T 31-10-2018 DY252_08390 c0352e261b8c9f04e2aded5f46aca371 536 Pfam PF02954 Bacterial regulatory protein, Fis family 491 527 1.9E-12 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_08390 c0352e261b8c9f04e2aded5f46aca371 536 SUPERFAMILY SSF52540 145 388 6.16E-69 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_08390 c0352e261b8c9f04e2aded5f46aca371 536 Gene3D G3DSA:1.10.10.60 486 528 2.1E-12 T 31-10-2018 DY252_08390 c0352e261b8c9f04e2aded5f46aca371 536 Gene3D G3DSA:3.40.50.2300 1 130 1.2E-32 T 31-10-2018 DY252_08390 c0352e261b8c9f04e2aded5f46aca371 536 Pfam PF00072 Response regulator receiver domain 7 116 1.4E-23 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_08390 c0352e261b8c9f04e2aded5f46aca371 536 Pfam PF00158 Sigma-54 interaction domain 146 312 1.6E-66 T 31-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DY252_19605 84d29113abf4bc928cc2182d02168839 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.4E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_19605 84d29113abf4bc928cc2182d02168839 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.4E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_19605 84d29113abf4bc928cc2182d02168839 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.4E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_19605 84d29113abf4bc928cc2182d02168839 321 Gene3D G3DSA:3.40.190.10 165 266 2.2E-72 T 31-10-2018 DY252_19605 84d29113abf4bc928cc2182d02168839 321 SUPERFAMILY SSF53850 92 297 8.38E-53 T 31-10-2018 DY252_19605 84d29113abf4bc928cc2182d02168839 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 2.1E-20 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_19605 84d29113abf4bc928cc2182d02168839 321 Pfam PF03466 LysR substrate binding domain 90 295 8.7E-49 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_19605 84d29113abf4bc928cc2182d02168839 321 SUPERFAMILY SSF46785 5 113 1.64E-24 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_19605 84d29113abf4bc928cc2182d02168839 321 Gene3D G3DSA:1.10.10.10 5 91 9.0E-31 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_19605 84d29113abf4bc928cc2182d02168839 321 Gene3D G3DSA:3.40.190.10 93 293 2.2E-72 T 31-10-2018 DY252_17520 cf361e437c44e7f762ebf7f89cd8a1f3 128 Gene3D G3DSA:3.40.50.2300 2 125 5.1E-35 T 31-10-2018 DY252_17520 cf361e437c44e7f762ebf7f89cd8a1f3 128 SUPERFAMILY SSF52172 6 125 4.55E-34 T 31-10-2018 IPR011006 CheY-like superfamily DY252_17520 cf361e437c44e7f762ebf7f89cd8a1f3 128 Pfam PF00072 Response regulator receiver domain 9 120 3.0E-27 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_17520 cf361e437c44e7f762ebf7f89cd8a1f3 128 SMART SM00448 7 121 1.3E-30 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_05215 15ee59b28d900dd64e084403bb747e81 504 Pfam PF12411 Choline sulfatase enzyme C terminal 449 500 8.8E-23 T 31-10-2018 IPR025863 Choline sulfatase enzyme C-terminal domain DY252_05215 15ee59b28d900dd64e084403bb747e81 504 TIGRFAM TIGR03417 chol_sulfatase: choline-sulfatase 3 501 1.4E-271 T 31-10-2018 IPR017785 Choline-sulfatase DY252_05215 15ee59b28d900dd64e084403bb747e81 504 ProSitePatterns PS00149 Sulfatases signature 2. 92 102 - T 31-10-2018 IPR024607 Sulfatase, conserved site DY252_05215 15ee59b28d900dd64e084403bb747e81 504 Pfam PF00884 Sulfatase 4 347 1.2E-50 T 31-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DY252_05215 15ee59b28d900dd64e084403bb747e81 504 SUPERFAMILY SSF53649 4 478 1.6E-111 T 31-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DY252_05215 15ee59b28d900dd64e084403bb747e81 504 Gene3D G3DSA:3.40.720.10 3 462 2.5E-109 T 31-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DY252_21425 d0a023a3058b50e6a30cb9df7c84ef70 527 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 75 519 4.6E-86 T 31-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 DY252_21425 d0a023a3058b50e6a30cb9df7c84ef70 527 Gene3D G3DSA:3.40.50.300 306 511 2.1E-43 T 31-10-2018 DY252_21425 d0a023a3058b50e6a30cb9df7c84ef70 527 SUPERFAMILY SSF52540 108 512 6.11E-47 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_15965 a750492d8dc0ec6c43e01719d53e4872 333 SUPERFAMILY SSF54506 4 330 8.52E-112 T 31-10-2018 DY252_15965 a750492d8dc0ec6c43e01719d53e4872 333 Pfam PF05544 Proline racemase 8 330 6.9E-129 T 31-10-2018 IPR008794 Proline racemase family DY252_15965 a750492d8dc0ec6c43e01719d53e4872 333 Gene3D G3DSA:3.10.310.10 144 309 2.7E-110 T 31-10-2018 DY252_15965 a750492d8dc0ec6c43e01719d53e4872 333 PIRSF PIRSF029792 1 333 3.4E-124 T 31-10-2018 IPR008794 Proline racemase family DY252_15965 a750492d8dc0ec6c43e01719d53e4872 333 Gene3D G3DSA:3.10.310.10 8 331 2.7E-110 T 31-10-2018 DY252_00600 0932d5bb89524942f150f07837912c42 86 SUPERFAMILY SSF46992 4 86 1.44E-24 T 31-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_00600 0932d5bb89524942f150f07837912c42 86 Pfam PF01649 Ribosomal protein S20 2 84 5.7E-22 T 31-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_00600 0932d5bb89524942f150f07837912c42 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 1.2E-20 T 31-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_00600 0932d5bb89524942f150f07837912c42 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 20 86 7.0E-17 T 31-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_00600 0932d5bb89524942f150f07837912c42 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 15.182 T 31-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_00600 0932d5bb89524942f150f07837912c42 86 Gene3D G3DSA:1.20.58.110 1 86 1.8E-22 T 31-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_20260 f9d84f118ae6a3a3b593cd8189cca1f0 317 Gene3D G3DSA:1.10.150.130 16 116 4.9E-16 T 31-10-2018 IPR010998 Integrase/recombinase, N-terminal DY252_20260 f9d84f118ae6a3a3b593cd8189cca1f0 317 Pfam PF00589 Phage integrase family 133 299 5.4E-35 T 31-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DY252_20260 f9d84f118ae6a3a3b593cd8189cca1f0 317 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 18 314 51.14 T 31-10-2018 IPR023009 Tyrosine recombinase XerC/XerD DY252_20260 f9d84f118ae6a3a3b593cd8189cca1f0 317 SUPERFAMILY SSF56349 126 311 5.59E-45 T 31-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DY252_20260 f9d84f118ae6a3a3b593cd8189cca1f0 317 Gene3D G3DSA:1.10.443.10 131 308 2.5E-46 T 31-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DY252_20260 f9d84f118ae6a3a3b593cd8189cca1f0 317 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 26 107 4.6E-15 T 31-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DY252_20260 f9d84f118ae6a3a3b593cd8189cca1f0 317 SUPERFAMILY SSF47823 19 109 2.75E-13 T 31-10-2018 DY252_07110 982e85f2626f99123e41a2239596438f 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 310 2.5E-16 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_07110 982e85f2626f99123e41a2239596438f 334 SUPERFAMILY SSF52540 13 263 5.68E-71 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07110 982e85f2626f99123e41a2239596438f 334 Pfam PF00005 ABC transporter 40 191 2.2E-30 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_07110 982e85f2626f99123e41a2239596438f 334 SMART SM00382 48 240 1.8E-15 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_07110 982e85f2626f99123e41a2239596438f 334 Gene3D G3DSA:3.40.50.300 10 334 4.7E-100 T 31-10-2018 DY252_07110 982e85f2626f99123e41a2239596438f 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 330 2.9E-27 T 31-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DY252_07110 982e85f2626f99123e41a2239596438f 334 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_20910 f1a1bb6c1cafd16dac4276d4eff70e52 327 Gene3D G3DSA:3.40.190.10 103 295 1.2E-37 T 31-10-2018 DY252_20910 f1a1bb6c1cafd16dac4276d4eff70e52 327 SUPERFAMILY SSF46785 11 121 3.16E-22 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_20910 f1a1bb6c1cafd16dac4276d4eff70e52 327 SUPERFAMILY SSF53850 99 302 2.17E-32 T 31-10-2018 DY252_20910 f1a1bb6c1cafd16dac4276d4eff70e52 327 Gene3D G3DSA:3.40.190.10 173 275 1.2E-37 T 31-10-2018 DY252_20910 f1a1bb6c1cafd16dac4276d4eff70e52 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 2.6E-18 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_20910 f1a1bb6c1cafd16dac4276d4eff70e52 327 Gene3D G3DSA:1.10.10.10 11 102 2.1E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_20910 f1a1bb6c1cafd16dac4276d4eff70e52 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.4E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_20910 f1a1bb6c1cafd16dac4276d4eff70e52 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.4E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_20910 f1a1bb6c1cafd16dac4276d4eff70e52 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.4E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_20910 f1a1bb6c1cafd16dac4276d4eff70e52 327 Pfam PF03466 LysR substrate binding domain 98 299 5.5E-36 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_00805 ada19cafb7dcc834e3a4d3e4235187c9 272 Gene3D G3DSA:1.25.40.10 30 265 9.5E-28 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_00805 ada19cafb7dcc834e3a4d3e4235187c9 272 Pfam PF13432 Tetratricopeptide repeat 201 244 0.0048 T 31-10-2018 DY252_00805 ada19cafb7dcc834e3a4d3e4235187c9 272 SMART SM00028 151 184 7.2E-4 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_00805 ada19cafb7dcc834e3a4d3e4235187c9 272 SMART SM00028 117 150 130.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_00805 ada19cafb7dcc834e3a4d3e4235187c9 272 SMART SM00028 219 252 11.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_00805 ada19cafb7dcc834e3a4d3e4235187c9 272 SMART SM00028 185 218 0.41 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_00805 ada19cafb7dcc834e3a4d3e4235187c9 272 SUPERFAMILY SSF48452 120 248 2.4E-25 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_00805 ada19cafb7dcc834e3a4d3e4235187c9 272 Pfam PF13181 Tetratricopeptide repeat 152 184 0.17 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_01155 467d10578bb28bbec9dd1905ada146ea 266 Gene3D G3DSA:3.30.420.40 132 222 1.6E-47 T 31-10-2018 DY252_01155 467d10578bb28bbec9dd1905ada146ea 266 Gene3D G3DSA:3.30.420.40 40 250 1.6E-47 T 31-10-2018 DY252_01155 467d10578bb28bbec9dd1905ada146ea 266 Pfam PF00814 Glycoprotease family 68 164 2.4E-22 T 31-10-2018 IPR000905 Gcp-like domain DY252_01155 467d10578bb28bbec9dd1905ada146ea 266 SUPERFAMILY SSF53067 149 247 2.33E-6 T 31-10-2018 DY252_01155 467d10578bb28bbec9dd1905ada146ea 266 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 40 250 3.0E-49 T 31-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 DY252_01155 467d10578bb28bbec9dd1905ada146ea 266 SUPERFAMILY SSF53067 40 140 4.21E-25 T 31-10-2018 DY252_12415 b0be5f9b1b185c08855333bb2478272b 348 Pfam PF03330 Lytic transglycolase 80 169 5.8E-24 T 31-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain DY252_12415 b0be5f9b1b185c08855333bb2478272b 348 SUPERFAMILY SSF50685 74 173 3.1E-10 T 31-10-2018 IPR036908 RlpA-like domain superfamily DY252_12415 b0be5f9b1b185c08855333bb2478272b 348 SUPERFAMILY SSF110997 263 335 8.37E-11 T 31-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DY252_12415 b0be5f9b1b185c08855333bb2478272b 348 Gene3D G3DSA:3.30.70.1070 265 337 1.5E-5 T 31-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DY252_12415 b0be5f9b1b185c08855333bb2478272b 348 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 7 173 25.01 T 31-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 DY252_12415 b0be5f9b1b185c08855333bb2478272b 348 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 83 182 7.2E-43 T 31-10-2018 IPR012997 Rare lipoprotein A DY252_12415 b0be5f9b1b185c08855333bb2478272b 348 Pfam PF05036 Sporulation related domain 262 330 2.5E-8 T 31-10-2018 IPR007730 Sporulation-like domain GO:0042834 DY252_12415 b0be5f9b1b185c08855333bb2478272b 348 Gene3D G3DSA:2.40.40.10 80 174 7.4E-38 T 31-10-2018 IPR036908 RlpA-like domain superfamily DY252_12900 97bced16d8304c85bd44c4ad0bd4980f 139 Pfam PF05443 ROS/MUCR transcriptional regulator protein 14 135 2.6E-51 T 31-10-2018 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 DY252_12900 97bced16d8304c85bd44c4ad0bd4980f 139 Gene3D G3DSA:1.10.10.1550 62 118 5.9E-32 T 31-10-2018 DY252_09320 800a40fd43348b5e42d1576cd611662f 151 SUPERFAMILY SSF102400 1 139 8.89E-38 T 31-10-2018 IPR036768 DNA polymerase III subunit chi superfamily DY252_09320 800a40fd43348b5e42d1576cd611662f 151 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 134 1.3E-35 T 31-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 DY252_09320 800a40fd43348b5e42d1576cd611662f 151 Gene3D G3DSA:3.40.50.10110 1 138 1.1E-20 T 31-10-2018 IPR036768 DNA polymerase III subunit chi superfamily DY252_20850 9131df0d947f2da7dc34acae762ef4c8 130 Gene3D G3DSA:1.20.1260.10 70 130 8.9E-22 T 31-10-2018 IPR012347 Ferritin-like DY252_20850 9131df0d947f2da7dc34acae762ef4c8 130 Pfam PF03713 Domain of unknown function (DUF305) 33 125 1.6E-19 T 31-10-2018 IPR005183 Domain of unknown function DUF305 DY252_01660 a38fa60404237d3597fd6ad689168c66 358 SUPERFAMILY SSF56935 28 358 9.42E-30 T 31-10-2018 DY252_01660 a38fa60404237d3597fd6ad689168c66 358 Gene3D G3DSA:2.40.160.10 27 354 5.8E-47 T 31-10-2018 IPR023614 Porin domain superfamily DY252_01660 a38fa60404237d3597fd6ad689168c66 358 Pfam PF13609 Gram-negative porin 9 329 5.2E-42 T 31-10-2018 DY252_09925 51e442d4e5834044ea293fe6efd5c54b 410 Pfam PF01734 Patatin-like phospholipase 28 279 2.2E-18 T 31-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DY252_09925 51e442d4e5834044ea293fe6efd5c54b 410 Gene3D G3DSA:3.40.1090.10 11 280 4.5E-11 T 31-10-2018 DY252_09925 51e442d4e5834044ea293fe6efd5c54b 410 SUPERFAMILY SSF52151 21 385 2.62E-22 T 31-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 SMART SM00271 4 62 1.2E-31 T 31-10-2018 IPR001623 DnaJ domain DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 31-10-2018 IPR018253 DnaJ domain, conserved site DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 Gene3D G3DSA:2.60.260.20 259 366 1.5E-29 T 31-10-2018 DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 Gene3D G3DSA:2.10.230.10 151 211 4.1E-39 T 31-10-2018 DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 Gene3D G3DSA:2.60.260.20 121 253 4.1E-39 T 31-10-2018 DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 41.508 T 31-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 Gene3D G3DSA:1.10.287.110 1 119 2.6E-36 T 31-10-2018 IPR036869 Chaperone J-domain superfamily DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 SUPERFAMILY SSF46565 1 101 3.79E-35 T 31-10-2018 IPR036869 Chaperone J-domain superfamily DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 Pfam PF00226 DnaJ domain 5 67 3.0E-27 T 31-10-2018 IPR001623 DnaJ domain DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 354 9.9E-133 T 31-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 SUPERFAMILY SSF57938 138 215 1.44E-21 T 31-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 SUPERFAMILY SSF49493 262 349 1.09E-23 T 31-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 SUPERFAMILY SSF49493 123 260 2.75E-18 T 31-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 Pfam PF00684 DnaJ central domain 151 211 1.3E-14 T 31-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 Pfam PF01556 DnaJ C terminal domain 125 338 2.8E-42 T 31-10-2018 IPR002939 Chaperone DnaJ, C-terminal DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 PRINTS PR00625 DnaJ domain signature 25 40 1.5E-31 T 31-10-2018 IPR001623 DnaJ domain DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 PRINTS PR00625 DnaJ domain signature 42 62 1.5E-31 T 31-10-2018 IPR001623 DnaJ domain DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 PRINTS PR00625 DnaJ domain signature 7 25 1.5E-31 T 31-10-2018 IPR001623 DnaJ domain DY252_01985 be32034fe4e04a5ea74d096e8dc81f3a 381 PRINTS PR00625 DnaJ domain signature 62 81 1.5E-31 T 31-10-2018 IPR001623 DnaJ domain DY252_13125 0584204ea614be1d397c6310c9a1086d 219 Gene3D G3DSA:3.90.420.10 51 218 2.4E-48 T 31-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DY252_13125 0584204ea614be1d397c6310c9a1086d 219 Pfam PF00174 Oxidoreductase molybdopterin binding domain 57 201 2.3E-37 T 31-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 DY252_13125 0584204ea614be1d397c6310c9a1086d 219 SUPERFAMILY SSF56524 33 218 3.66E-62 T 31-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DY252_13695 e8a6bfcf5837e619007a128e55c4b536 323 TIGRFAM TIGR01230 agmatinase: agmatinase 48 315 1.5E-70 T 31-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 DY252_13695 e8a6bfcf5837e619007a128e55c4b536 323 SUPERFAMILY SSF52768 28 319 1.01E-88 T 31-10-2018 IPR023696 Ureohydrolase domain superfamily DY252_13695 e8a6bfcf5837e619007a128e55c4b536 323 PIRSF PIRSF036979 25 321 9.7E-85 T 31-10-2018 IPR006035 Ureohydrolase GO:0046872 DY252_13695 e8a6bfcf5837e619007a128e55c4b536 323 Pfam PF00491 Arginase family 49 314 5.6E-85 T 31-10-2018 IPR006035 Ureohydrolase GO:0046872 DY252_13695 e8a6bfcf5837e619007a128e55c4b536 323 ProSitePatterns PS01053 Arginase family signature. 244 265 - T 31-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 DY252_13695 e8a6bfcf5837e619007a128e55c4b536 323 Gene3D G3DSA:3.40.800.10 4 322 8.5E-110 T 31-10-2018 DY252_18920 1970b7f5fcbeda752f0d3554719b1b42 445 Gene3D G3DSA:3.30.565.10 308 430 2.0E-11 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_18920 1970b7f5fcbeda752f0d3554719b1b42 445 SMART SM00388 234 299 4.1E-13 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_18920 1970b7f5fcbeda752f0d3554719b1b42 445 SMART SM00387 343 444 0.0026 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_18920 1970b7f5fcbeda752f0d3554719b1b42 445 SUPERFAMILY SSF55874 302 427 5.86E-15 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_18920 1970b7f5fcbeda752f0d3554719b1b42 445 SUPERFAMILY SSF47384 218 296 6.54E-14 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_18920 1970b7f5fcbeda752f0d3554719b1b42 445 Gene3D G3DSA:1.10.287.130 185 298 6.2E-19 T 31-10-2018 DY252_18920 1970b7f5fcbeda752f0d3554719b1b42 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 297 7.2E-13 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_11960 e82190fc4198a0783c96e2a4eee74878 264 Gene3D G3DSA:2.70.70.10 95 233 2.3E-17 T 31-10-2018 IPR011055 Duplicated hybrid motif DY252_11960 e82190fc4198a0783c96e2a4eee74878 264 Pfam PF01551 Peptidase family M23 120 217 5.2E-15 T 31-10-2018 IPR016047 Peptidase M23 DY252_11960 e82190fc4198a0783c96e2a4eee74878 264 SUPERFAMILY SSF51261 116 219 2.98E-17 T 31-10-2018 IPR011055 Duplicated hybrid motif DY252_00150 67a5f9595a6ddbfc17ac2bb2d7a9fc00 166 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 31-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DY252_00150 67a5f9595a6ddbfc17ac2bb2d7a9fc00 166 SUPERFAMILY SSF46785 8 145 3.95E-23 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_00150 67a5f9595a6ddbfc17ac2bb2d7a9fc00 166 Gene3D G3DSA:1.10.10.10 2 143 3.9E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_00150 67a5f9595a6ddbfc17ac2bb2d7a9fc00 166 Pfam PF13463 Winged helix DNA-binding domain 36 100 5.8E-11 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_00150 67a5f9595a6ddbfc17ac2bb2d7a9fc00 166 SMART SM00347 28 127 4.5E-18 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_07135 f7227229e0e15c0a51e7e0fef75bf60d 404 Gene3D G3DSA:1.10.10.60 344 400 1.3E-19 T 31-10-2018 DY252_07135 f7227229e0e15c0a51e7e0fef75bf60d 404 SUPERFAMILY SSF46689 348 398 1.43E-12 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_07135 f7227229e0e15c0a51e7e0fef75bf60d 404 Pfam PF12833 Helix-turn-helix domain 317 396 9.6E-23 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_07135 f7227229e0e15c0a51e7e0fef75bf60d 404 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 348 391 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_07135 f7227229e0e15c0a51e7e0fef75bf60d 404 Gene3D G3DSA:1.10.10.60 304 343 4.5E-5 T 31-10-2018 DY252_07135 f7227229e0e15c0a51e7e0fef75bf60d 404 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 364 379 5.9E-7 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_07135 f7227229e0e15c0a51e7e0fef75bf60d 404 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 379 395 5.9E-7 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_07135 f7227229e0e15c0a51e7e0fef75bf60d 404 SMART SM00342 310 395 1.3E-20 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_17675 bcd2f3d9b1d93101c125fd10bbcd26d2 264 Pfam PF01618 MotA/TolQ/ExbB proton channel family 119 223 1.4E-23 T 31-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DY252_17675 bcd2f3d9b1d93101c125fd10bbcd26d2 264 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 194 211 - T 31-10-2018 IPR000540 Flagellar motor protein MotA, conserved site DY252_19485 2733fc2eeb30ca66e5ab05d79fbf22f2 335 Pfam PF12556 Cobaltochelatase CobS subunit N terminal 15 47 1.1E-17 T 31-10-2018 IPR025865 Cobaltochelatase subunit CobS N-terminal domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 DY252_19485 2733fc2eeb30ca66e5ab05d79fbf22f2 335 SUPERFAMILY SSF52540 64 291 5.29E-32 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_19485 2733fc2eeb30ca66e5ab05d79fbf22f2 335 Gene3D G3DSA:3.40.50.300 57 237 2.0E-24 T 31-10-2018 DY252_19485 2733fc2eeb30ca66e5ab05d79fbf22f2 335 TIGRFAM TIGR01650 PD_CobS: cobaltochelatase, CobS subunit 18 332 7.8E-177 T 31-10-2018 IPR006537 Cobaltochelatase subunit CobS KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 DY252_19485 2733fc2eeb30ca66e5ab05d79fbf22f2 335 Pfam PF07728 AAA domain (dynein-related subfamily) 74 198 1.5E-11 T 31-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 DY252_03730 83990c405dc49b0ddae7c23f487ff494 423 Gene3D G3DSA:2.160.20.80 19 117 1.8E-21 T 31-10-2018 DY252_03730 83990c405dc49b0ddae7c23f487ff494 423 SUPERFAMILY SSF141571 28 111 1.29E-21 T 31-10-2018 DY252_03730 83990c405dc49b0ddae7c23f487ff494 423 SUPERFAMILY SSF141571 128 233 1.7E-28 T 31-10-2018 DY252_03730 83990c405dc49b0ddae7c23f487ff494 423 Gene3D G3DSA:2.160.20.80 251 419 4.2E-28 T 31-10-2018 DY252_03730 83990c405dc49b0ddae7c23f487ff494 423 SUPERFAMILY SSF141571 263 410 1.96E-25 T 31-10-2018 DY252_03730 83990c405dc49b0ddae7c23f487ff494 423 Pfam PF00805 Pentapeptide repeats (8 copies) 33 64 0.0038 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_03730 83990c405dc49b0ddae7c23f487ff494 423 Pfam PF00805 Pentapeptide repeats (8 copies) 358 393 2.5E-6 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_03730 83990c405dc49b0ddae7c23f487ff494 423 Pfam PF00805 Pentapeptide repeats (8 copies) 128 163 1.8E-9 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_03730 83990c405dc49b0ddae7c23f487ff494 423 Pfam PF00805 Pentapeptide repeats (8 copies) 164 200 3.6E-10 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_03730 83990c405dc49b0ddae7c23f487ff494 423 Pfam PF00805 Pentapeptide repeats (8 copies) 303 342 2.8E-7 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_03730 83990c405dc49b0ddae7c23f487ff494 423 Pfam PF00805 Pentapeptide repeats (8 copies) 77 110 1.1E-9 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_03730 83990c405dc49b0ddae7c23f487ff494 423 Gene3D G3DSA:2.160.20.80 122 237 2.0E-29 T 31-10-2018 DY252_16490 a5a09fcca27a1ce3610702d640ffc973 119 SUPERFAMILY SSF56399 8 117 4.03E-34 T 31-10-2018 DY252_16490 a5a09fcca27a1ce3610702d640ffc973 119 Pfam PF06108 Protein of unknown function (DUF952) 15 101 7.9E-25 T 31-10-2018 IPR009297 Protein of unknown function DUF952 DY252_16490 a5a09fcca27a1ce3610702d640ffc973 119 Gene3D G3DSA:3.20.170.20 7 119 3.3E-32 T 31-10-2018 DY252_16920 38247e15c488350bed1cb630ebab0820 183 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 68 181 2.9E-24 T 31-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 DY252_16920 38247e15c488350bed1cb630ebab0820 183 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 71 182 5.7E-31 T 31-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 DY252_13735 92bfb31dcb93523c7ba4ba5e125cd72c 438 Gene3D G3DSA:3.50.50.60 41 396 2.1E-74 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_13735 92bfb31dcb93523c7ba4ba5e125cd72c 438 SUPERFAMILY SSF51905 38 344 5.61E-48 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_13735 92bfb31dcb93523c7ba4ba5e125cd72c 438 Pfam PF01266 FAD dependent oxidoreductase 41 394 6.9E-58 T 31-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DY252_13735 92bfb31dcb93523c7ba4ba5e125cd72c 438 Gene3D G3DSA:3.30.9.10 133 357 2.1E-74 T 31-10-2018 DY252_01925 6f4b75acc6bbbd04ac47136b2e2a31d7 329 Gene3D G3DSA:3.40.1190.20 9 315 7.8E-91 T 31-10-2018 IPR029056 Ribokinase-like DY252_01925 6f4b75acc6bbbd04ac47136b2e2a31d7 329 SUPERFAMILY SSF53613 5 319 4.83E-81 T 31-10-2018 IPR029056 Ribokinase-like DY252_01925 6f4b75acc6bbbd04ac47136b2e2a31d7 329 Pfam PF00294 pfkB family carbohydrate kinase 59 317 3.7E-51 T 31-10-2018 IPR011611 Carbohydrate kinase PfkB DY252_01925 6f4b75acc6bbbd04ac47136b2e2a31d7 329 Gene3D G3DSA:3.30.1110.10 16 132 7.8E-91 T 31-10-2018 DY252_01925 6f4b75acc6bbbd04ac47136b2e2a31d7 329 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 273 286 - T 31-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DY252_12015 1026e9e1bffb4b270bfad341b982037f 471 SUPERFAMILY SSF103473 12 405 1.03E-37 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_12015 1026e9e1bffb4b270bfad341b982037f 471 Gene3D G3DSA:1.20.1250.20 6 399 4.7E-28 T 31-10-2018 DY252_12015 1026e9e1bffb4b270bfad341b982037f 471 Pfam PF07690 Major Facilitator Superfamily 16 297 4.4E-17 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_20285 c878f6f4a81faecc14f4c046a8697966 462 SUPERFAMILY SSF55931 122 458 4.22E-92 T 31-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DY252_20285 c878f6f4a81faecc14f4c046a8697966 462 Gene3D G3DSA:3.30.590.10 119 458 4.8E-92 T 31-10-2018 DY252_20285 c878f6f4a81faecc14f4c046a8697966 462 SMART SM01230 122 379 5.6E-80 T 31-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_20285 c878f6f4a81faecc14f4c046a8697966 462 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 31-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DY252_20285 c878f6f4a81faecc14f4c046a8697966 462 Pfam PF00120 Glutamine synthetase, catalytic domain 123 458 1.8E-95 T 31-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_20285 c878f6f4a81faecc14f4c046a8697966 462 SUPERFAMILY SSF54368 25 120 1.11E-8 T 31-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_13160 4c4c175811fa88a125d6d95326d0bf6a 158 Pfam PF04608 Phosphatidylglycerophosphatase A 4 146 6.4E-47 T 31-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 DY252_13160 4c4c175811fa88a125d6d95326d0bf6a 158 PIRSF PIRSF006162 1 155 2.7E-47 T 31-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DY252_13160 4c4c175811fa88a125d6d95326d0bf6a 158 SUPERFAMILY SSF101307 2 146 1.83E-36 T 31-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 DY252_07015 47504a9e8c7d9954d0f0fbe06af682d0 497 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 481 4.5E-155 T 31-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 DY252_07015 47504a9e8c7d9954d0f0fbe06af682d0 497 Gene3D G3DSA:2.30.42.60 389 496 1.8E-13 T 31-10-2018 DY252_07015 47504a9e8c7d9954d0f0fbe06af682d0 497 Gene3D G3DSA:2.40.10.120 38 273 9.1E-87 T 31-10-2018 DY252_07015 47504a9e8c7d9954d0f0fbe06af682d0 497 Pfam PF13180 PDZ domain 280 370 2.2E-17 T 31-10-2018 IPR001478 PDZ domain GO:0005515 DY252_07015 47504a9e8c7d9954d0f0fbe06af682d0 497 SUPERFAMILY SSF50494 37 271 2.67E-68 T 31-10-2018 IPR009003 Peptidase S1, PA clan DY252_07015 47504a9e8c7d9954d0f0fbe06af682d0 497 SUPERFAMILY SSF50156 401 480 2.5E-12 T 31-10-2018 IPR036034 PDZ superfamily GO:0005515 DY252_07015 47504a9e8c7d9954d0f0fbe06af682d0 497 Pfam PF13365 Trypsin-like peptidase domain 106 240 8.6E-36 T 31-10-2018 DY252_07015 47504a9e8c7d9954d0f0fbe06af682d0 497 Gene3D G3DSA:2.30.42.10 277 380 3.0E-28 T 31-10-2018 DY252_07015 47504a9e8c7d9954d0f0fbe06af682d0 497 PRINTS PR00834 HtrA/DegQ protease family signature 177 201 7.4E-57 T 31-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DY252_07015 47504a9e8c7d9954d0f0fbe06af682d0 497 PRINTS PR00834 HtrA/DegQ protease family signature 211 228 7.4E-57 T 31-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DY252_07015 47504a9e8c7d9954d0f0fbe06af682d0 497 PRINTS PR00834 HtrA/DegQ protease family signature 233 250 7.4E-57 T 31-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DY252_07015 47504a9e8c7d9954d0f0fbe06af682d0 497 PRINTS PR00834 HtrA/DegQ protease family signature 319 331 7.4E-57 T 31-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DY252_07015 47504a9e8c7d9954d0f0fbe06af682d0 497 PRINTS PR00834 HtrA/DegQ protease family signature 115 127 7.4E-57 T 31-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DY252_07015 47504a9e8c7d9954d0f0fbe06af682d0 497 PRINTS PR00834 HtrA/DegQ protease family signature 136 156 7.4E-57 T 31-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DY252_07015 47504a9e8c7d9954d0f0fbe06af682d0 497 SMART SM00228 279 361 1.3E-11 T 31-10-2018 IPR001478 PDZ domain GO:0005515 DY252_07015 47504a9e8c7d9954d0f0fbe06af682d0 497 SMART SM00228 399 484 0.0015 T 31-10-2018 IPR001478 PDZ domain GO:0005515 DY252_07015 47504a9e8c7d9954d0f0fbe06af682d0 497 SUPERFAMILY SSF50156 237 362 1.09E-23 T 31-10-2018 IPR036034 PDZ superfamily GO:0005515 DY252_11285 78d9cd46659da98d832ed6d5d5b3d715 145 Gene3D G3DSA:3.30.70.920 61 144 1.5E-15 T 31-10-2018 DY252_11285 78d9cd46659da98d832ed6d5d5b3d715 145 Gene3D G3DSA:1.10.10.10 1 58 1.5E-20 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_11285 78d9cd46659da98d832ed6d5d5b3d715 145 Pfam PF01037 Lrp/AsnC ligand binding domain 70 140 4.2E-14 T 31-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DY252_11285 78d9cd46659da98d832ed6d5d5b3d715 145 SUPERFAMILY SSF46785 4 59 1.64E-14 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_11285 78d9cd46659da98d832ed6d5d5b3d715 145 SMART SM00344 5 110 6.0E-22 T 31-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DY252_11285 78d9cd46659da98d832ed6d5d5b3d715 145 Pfam PF13404 AsnC-type helix-turn-helix domain 5 46 8.9E-17 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_11285 78d9cd46659da98d832ed6d5d5b3d715 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 2.2E-13 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_11285 78d9cd46659da98d832ed6d5d5b3d715 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 2.2E-13 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_11285 78d9cd46659da98d832ed6d5d5b3d715 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 2.2E-13 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_11285 78d9cd46659da98d832ed6d5d5b3d715 145 SUPERFAMILY SSF54909 67 144 2.15E-14 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_21690 e2302de98f865e9a98f7a2a4d169c7fe 281 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 3 281 55.695 T 31-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 DY252_21690 e2302de98f865e9a98f7a2a4d169c7fe 281 SUPERFAMILY SSF51161 4 265 4.99E-67 T 31-10-2018 IPR011004 Trimeric LpxA-like superfamily DY252_21690 e2302de98f865e9a98f7a2a4d169c7fe 281 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 179 214 1.9E-11 T 31-10-2018 IPR001451 Hexapeptide repeat DY252_21690 e2302de98f865e9a98f7a2a4d169c7fe 281 Gene3D G3DSA:1.10.166.10 3 71 2.1E-27 T 31-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 DY252_21690 e2302de98f865e9a98f7a2a4d169c7fe 281 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 6 70 2.2E-24 T 31-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 DY252_21690 e2302de98f865e9a98f7a2a4d169c7fe 281 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 7 280 1.6E-128 T 31-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 DY252_21690 e2302de98f865e9a98f7a2a4d169c7fe 281 Gene3D G3DSA:2.160.10.10 91 266 1.6E-51 T 31-10-2018 DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 Gene3D G3DSA:1.10.150.20 529 612 1.3E-20 T 31-10-2018 DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 SUPERFAMILY SSF50249 335 413 7.54E-26 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 Gene3D G3DSA:3.40.50.10190 613 701 1.4E-27 T 31-10-2018 IPR036420 BRCT domain superfamily DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 SUPERFAMILY SSF47781 424 610 5.84E-50 T 31-10-2018 IPR010994 RuvA domain 2-like DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 30 695 6.8E-231 T 31-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 Gene3D G3DSA:2.40.50.140 335 407 4.7E-33 T 31-10-2018 DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 134 163 - T 31-10-2018 IPR018239 NAD-dependent DNA ligase, active site DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 427 454 1.3E-11 T 31-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 Gene3D G3DSA:1.10.150.20 452 528 1.0E-25 T 31-10-2018 DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 SUPERFAMILY SSF56091 19 333 3.2E-113 T 31-10-2018 DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 626 699 1.5E-11 T 31-10-2018 IPR001357 BRCT domain DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 Gene3D G3DSA:1.10.287.610 18 87 3.1E-21 T 31-10-2018 DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 PIRSF PIRSF001604 15 702 6.3E-235 T 31-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 Gene3D G3DSA:2.20.70.80 413 451 2.9E-17 T 31-10-2018 DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 Gene3D G3DSA:3.30.470.90 88 334 3.8E-96 T 31-10-2018 DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 Pfam PF12826 Helix-hairpin-helix motif 533 606 4.9E-14 T 31-10-2018 DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 SUPERFAMILY SSF52113 622 700 7.69E-19 T 31-10-2018 IPR036420 BRCT domain superfamily DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 Hamap MF_01588 DNA ligase [ligA]. 20 699 51.093 T 31-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 SMART SM00292 625 702 4.7E-12 T 31-10-2018 IPR001357 BRCT domain DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 348 363 - T 31-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 SMART SM00278 503 522 430.0 T 31-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 SMART SM00278 535 554 430.0 T 31-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 SMART SM00278 577 596 50.0 T 31-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 21 335 1.5E-117 T 31-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 339 411 2.2E-32 T 31-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 DY252_06415 0bf7e01b0f3c38040469f1b320f5feb7 702 SMART SM00532 21 468 2.0E-242 T 31-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 DY252_22100 48a0e6eee0d7bead25dca2d906c318d6 562 SUPERFAMILY SSF103190 87 186 5.49E-9 T 31-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DY252_22100 48a0e6eee0d7bead25dca2d906c318d6 562 Gene3D G3DSA:1.20.1480.50 180 272 3.6E-6 T 31-10-2018 DY252_22100 48a0e6eee0d7bead25dca2d906c318d6 562 SMART SM00283 307 561 1.8E-48 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_22100 48a0e6eee0d7bead25dca2d906c318d6 562 SUPERFAMILY SSF158472 217 264 3.66E-5 T 31-10-2018 DY252_22100 48a0e6eee0d7bead25dca2d906c318d6 562 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 368 529 3.2E-32 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_22100 48a0e6eee0d7bead25dca2d906c318d6 562 SUPERFAMILY SSF58104 313 560 1.83E-59 T 31-10-2018 DY252_22100 48a0e6eee0d7bead25dca2d906c318d6 562 Pfam PF17201 Cache 3/Cache 2 fusion domain 85 193 1.7E-32 T 31-10-2018 IPR033462 Cache 3/Cache 2 fusion domain DY252_22100 48a0e6eee0d7bead25dca2d906c318d6 562 Gene3D G3DSA:1.10.287.950 273 561 3.9E-54 T 31-10-2018 DY252_00590 58f3f1a9eb29b7d175f7c0703a76376c 372 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 249 9.8E-33 T 31-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 DY252_00590 58f3f1a9eb29b7d175f7c0703a76376c 372 SUPERFAMILY SSF55979 129 250 3.14E-25 T 31-10-2018 DY252_00590 58f3f1a9eb29b7d175f7c0703a76376c 372 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 252 371 9.8E-30 T 31-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 DY252_00590 58f3f1a9eb29b7d175f7c0703a76376c 372 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 371 5.4E-95 T 31-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DY252_00590 58f3f1a9eb29b7d175f7c0703a76376c 372 SUPERFAMILY SSF55979 1 118 2.95E-27 T 31-10-2018 DY252_00590 58f3f1a9eb29b7d175f7c0703a76376c 372 Gene3D G3DSA:3.10.150.10 1 248 2.9E-120 T 31-10-2018 DY252_00590 58f3f1a9eb29b7d175f7c0703a76376c 372 SMART SM00480 17 368 1.3E-128 T 31-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DY252_00590 58f3f1a9eb29b7d175f7c0703a76376c 372 Gene3D G3DSA:3.70.10.10 139 370 2.9E-120 T 31-10-2018 DY252_00590 58f3f1a9eb29b7d175f7c0703a76376c 372 PIRSF PIRSF000804 1 372 3.2E-120 T 31-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DY252_00590 58f3f1a9eb29b7d175f7c0703a76376c 372 SUPERFAMILY SSF55979 251 372 5.89E-37 T 31-10-2018 DY252_00590 58f3f1a9eb29b7d175f7c0703a76376c 372 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 2.3E-35 T 31-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 DY252_19890 3c17c6cdf913ae52067d66c7dfe846b8 490 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 22 455 2.7E-116 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_19890 3c17c6cdf913ae52067d66c7dfe846b8 490 SUPERFAMILY SSF81442 18 474 1.2E-117 T 31-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_19890 3c17c6cdf913ae52067d66c7dfe846b8 490 Gene3D G3DSA:1.20.210.10 11 481 7.8E-189 T 31-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_19890 3c17c6cdf913ae52067d66c7dfe846b8 490 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 215 270 - T 31-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_19890 3c17c6cdf913ae52067d66c7dfe846b8 490 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 17 478 4.3E-231 T 31-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 DY252_01625 1556a514e8e60c55f04ab8c0b4e3176a 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 15 205 24.358 T 31-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DY252_01625 1556a514e8e60c55f04ab8c0b4e3176a 211 Gene3D G3DSA:3.40.50.150 9 208 2.0E-52 T 31-10-2018 DY252_01625 1556a514e8e60c55f04ab8c0b4e3176a 211 Pfam PF02527 rRNA small subunit methyltransferase G 24 184 9.8E-40 T 31-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DY252_01625 1556a514e8e60c55f04ab8c0b4e3176a 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 27 198 3.2E-38 T 31-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DY252_01625 1556a514e8e60c55f04ab8c0b4e3176a 211 SUPERFAMILY SSF53335 7 192 7.26E-33 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_03310 2cc27cc6e252d5840940610211b56222 198 Pfam PF02361 Cobalt transport protein 11 198 2.3E-20 T 31-10-2018 IPR003339 ABC/ECF transporter, transmembrane component DY252_10845 68ce086381120431c7aaee69b7a6b698 281 Gene3D G3DSA:3.40.50.720 5 238 6.3E-45 T 31-10-2018 DY252_10845 68ce086381120431c7aaee69b7a6b698 281 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 228 4.1E-30 T 31-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DY252_10845 68ce086381120431c7aaee69b7a6b698 281 Gene3D G3DSA:3.90.25.10 178 257 6.3E-45 T 31-10-2018 DY252_10845 68ce086381120431c7aaee69b7a6b698 281 SUPERFAMILY SSF51735 3 264 6.76E-46 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_15450 99e85db1943d618b045e1ed4da353ea7 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 1.7E-17 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_15450 99e85db1943d618b045e1ed4da353ea7 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 136 152 1.7E-17 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_15450 99e85db1943d618b045e1ed4da353ea7 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 100 115 1.7E-17 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_15450 99e85db1943d618b045e1ed4da353ea7 170 ProSitePatterns PS00855 Signal peptidases II signature. 103 115 - T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_15450 99e85db1943d618b045e1ed4da353ea7 170 Pfam PF01252 Signal peptidase (SPase) II 18 154 8.7E-37 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_15450 99e85db1943d618b045e1ed4da353ea7 170 TIGRFAM TIGR00077 lspA: signal peptidase II 6 162 4.4E-41 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_15450 99e85db1943d618b045e1ed4da353ea7 170 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 8 161 16.195 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_15515 99e85db1943d618b045e1ed4da353ea7 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 1.7E-17 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_15515 99e85db1943d618b045e1ed4da353ea7 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 136 152 1.7E-17 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_15515 99e85db1943d618b045e1ed4da353ea7 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 100 115 1.7E-17 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_15515 99e85db1943d618b045e1ed4da353ea7 170 ProSitePatterns PS00855 Signal peptidases II signature. 103 115 - T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_15515 99e85db1943d618b045e1ed4da353ea7 170 Pfam PF01252 Signal peptidase (SPase) II 18 154 8.7E-37 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_15515 99e85db1943d618b045e1ed4da353ea7 170 TIGRFAM TIGR00077 lspA: signal peptidase II 6 162 4.4E-41 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_15515 99e85db1943d618b045e1ed4da353ea7 170 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 8 161 16.195 T 31-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DY252_01770 67e2dc51c1a5e7d64689b44a07074548 180 Pfam PF03734 L,D-transpeptidase catalytic domain 30 175 6.5E-9 T 31-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 DY252_01770 67e2dc51c1a5e7d64689b44a07074548 180 SUPERFAMILY SSF141523 30 178 1.44E-5 T 31-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DY252_01365 290a0e08964f091a5607f70d9898091f 199 Pfam PF00398 Ribosomal RNA adenine dimethylase 37 94 8.4E-6 T 31-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DY252_01365 290a0e08964f091a5607f70d9898091f 199 Gene3D G3DSA:3.40.50.150 15 134 1.2E-10 T 31-10-2018 DY252_01365 290a0e08964f091a5607f70d9898091f 199 SUPERFAMILY SSF53335 7 167 1.17E-18 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_00030 0121a035fc82763fdb446cf0d6e197b7 643 SUPERFAMILY SSF56601 236 613 9.91E-52 T 31-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DY252_00030 0121a035fc82763fdb446cf0d6e197b7 643 Pfam PF00905 Penicillin binding protein transpeptidase domain 365 465 3.9E-6 T 31-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DY252_00030 0121a035fc82763fdb446cf0d6e197b7 643 Gene3D G3DSA:3.40.710.10 277 630 1.7E-46 T 31-10-2018 DY252_00030 0121a035fc82763fdb446cf0d6e197b7 643 Gene3D G3DSA:1.10.3810.10 81 269 8.5E-41 T 31-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_00030 0121a035fc82763fdb446cf0d6e197b7 643 SUPERFAMILY SSF53955 76 276 1.43E-40 T 31-10-2018 IPR023346 Lysozyme-like domain superfamily DY252_00030 0121a035fc82763fdb446cf0d6e197b7 643 Pfam PF00912 Transglycosylase 86 254 2.6E-34 T 31-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_22165 0121a035fc82763fdb446cf0d6e197b7 643 SUPERFAMILY SSF56601 236 613 9.91E-52 T 31-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DY252_22165 0121a035fc82763fdb446cf0d6e197b7 643 Pfam PF00905 Penicillin binding protein transpeptidase domain 365 465 3.9E-6 T 31-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DY252_22165 0121a035fc82763fdb446cf0d6e197b7 643 Gene3D G3DSA:3.40.710.10 277 630 1.7E-46 T 31-10-2018 DY252_22165 0121a035fc82763fdb446cf0d6e197b7 643 Gene3D G3DSA:1.10.3810.10 81 269 8.5E-41 T 31-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_22165 0121a035fc82763fdb446cf0d6e197b7 643 SUPERFAMILY SSF53955 76 276 1.43E-40 T 31-10-2018 IPR023346 Lysozyme-like domain superfamily DY252_22165 0121a035fc82763fdb446cf0d6e197b7 643 Pfam PF00912 Transglycosylase 86 254 2.6E-34 T 31-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_20900 8c3599556faab30b2d14793d1fc24faa 338 SUPERFAMILY SSF161111 40 237 1.57E-58 T 31-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DY252_20900 8c3599556faab30b2d14793d1fc24faa 338 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 41 313 6.3E-86 T 31-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DY252_20900 8c3599556faab30b2d14793d1fc24faa 338 Pfam PF01545 Cation efflux family 46 236 2.5E-49 T 31-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DY252_20900 8c3599556faab30b2d14793d1fc24faa 338 Gene3D G3DSA:1.20.1510.10 41 236 1.6E-45 T 31-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DY252_18940 cbd248f94c2d83fc9c7be24e7c01ec15 393 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 38 54 5.9E-7 T 31-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DY252_18940 cbd248f94c2d83fc9c7be24e7c01ec15 393 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 79 97 5.9E-7 T 31-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DY252_18940 cbd248f94c2d83fc9c7be24e7c01ec15 393 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 60 76 5.9E-7 T 31-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DY252_18940 cbd248f94c2d83fc9c7be24e7c01ec15 393 Gene3D G3DSA:3.40.50.2300 39 360 4.4E-79 T 31-10-2018 DY252_18940 cbd248f94c2d83fc9c7be24e7c01ec15 393 SUPERFAMILY SSF53822 37 390 8.64E-77 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_18940 cbd248f94c2d83fc9c7be24e7c01ec15 393 Pfam PF13458 Periplasmic binding protein 37 370 5.0E-60 T 31-10-2018 IPR028081 Leucine-binding protein domain DY252_18940 cbd248f94c2d83fc9c7be24e7c01ec15 393 Gene3D G3DSA:3.40.50.2300 159 287 4.4E-79 T 31-10-2018 DY252_19215 792f5d45ca4bcda00821ca7b5bf98dd8 272 SUPERFAMILY SSF52540 2 234 1.18E-54 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_19215 792f5d45ca4bcda00821ca7b5bf98dd8 272 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_19215 792f5d45ca4bcda00821ca7b5bf98dd8 272 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 1 241 2.4E-94 T 31-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 DY252_19215 792f5d45ca4bcda00821ca7b5bf98dd8 272 Gene3D G3DSA:3.40.50.300 1 257 1.8E-57 T 31-10-2018 DY252_19215 792f5d45ca4bcda00821ca7b5bf98dd8 272 SMART SM00382 27 245 4.4E-10 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_19215 792f5d45ca4bcda00821ca7b5bf98dd8 272 Pfam PF00005 ABC transporter 18 172 3.3E-29 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_02125 2ad183e7e163c76522b10bcaee491918 155 Pfam PF07681 DoxX 28 111 9.9E-18 T 31-10-2018 IPR032808 DoxX family DY252_06825 132928ba61f8a051f2a24f3c39b2128f 304 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 212 294 1.9E-9 T 31-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DY252_06825 132928ba61f8a051f2a24f3c39b2128f 304 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 172 237 3.1E-23 T 31-10-2018 IPR017703 YgfZ/GcvT conserved site DY252_06825 132928ba61f8a051f2a24f3c39b2128f 304 PIRSF PIRSF006487 9 139 3.8E-10 T 31-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DY252_06825 132928ba61f8a051f2a24f3c39b2128f 304 PIRSF PIRSF006487 143 290 2.8 T 31-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DY252_06825 132928ba61f8a051f2a24f3c39b2128f 304 SUPERFAMILY SSF103025 4 227 6.12E-50 T 31-10-2018 DY252_06825 132928ba61f8a051f2a24f3c39b2128f 304 Pfam PF01571 Aminomethyltransferase folate-binding domain 14 121 2.9E-13 T 31-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain DY252_06825 132928ba61f8a051f2a24f3c39b2128f 304 Gene3D G3DSA:3.30.1360.120 4 300 4.7E-60 T 31-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DY252_10520 f1912fb602f5224c1e18afec42fda0d1 275 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 18 265 2.4E-49 T 31-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 DY252_10520 f1912fb602f5224c1e18afec42fda0d1 275 SUPERFAMILY SSF53213 18 265 1.7E-80 T 31-10-2018 DY252_10520 f1912fb602f5224c1e18afec42fda0d1 275 Gene3D G3DSA:3.40.830.10 4 266 2.6E-82 T 31-10-2018 DY252_10520 f1912fb602f5224c1e18afec42fda0d1 275 PIRSF PIRSF006157 11 267 1.2E-86 T 31-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 DY252_10885 e10aeb1bce343d02b6629cc0e37e4f8f 290 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 287 6.8E-18 T 31-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DY252_10885 e10aeb1bce343d02b6629cc0e37e4f8f 290 SUPERFAMILY SSF48179 164 288 5.99E-23 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_10885 e10aeb1bce343d02b6629cc0e37e4f8f 290 SUPERFAMILY SSF51735 3 164 2.09E-35 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_10885 e10aeb1bce343d02b6629cc0e37e4f8f 290 Gene3D G3DSA:1.10.1040.10 164 290 6.4E-25 T 31-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DY252_10885 e10aeb1bce343d02b6629cc0e37e4f8f 290 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 163 1.1E-31 T 31-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DY252_10885 e10aeb1bce343d02b6629cc0e37e4f8f 290 Gene3D G3DSA:3.40.50.720 3 163 2.6E-43 T 31-10-2018 DY252_10885 e10aeb1bce343d02b6629cc0e37e4f8f 290 PIRSF PIRSF000103 1 290 4.1E-66 T 31-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DY252_18840 5271f3d5041f050a095e5d9631bdc4d5 413 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 5 146 1.6E-34 T 31-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 DY252_18840 5271f3d5041f050a095e5d9631bdc4d5 413 SUPERFAMILY SSF51735 1 201 1.38E-17 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_18840 5271f3d5041f050a095e5d9631bdc4d5 413 Gene3D G3DSA:3.40.50.720 6 398 6.3E-135 T 31-10-2018 DY252_18840 5271f3d5041f050a095e5d9631bdc4d5 413 Gene3D G3DSA:3.30.360.10 160 356 6.3E-135 T 31-10-2018 DY252_18840 5271f3d5041f050a095e5d9631bdc4d5 413 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 150 396 4.1E-23 T 31-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 DY252_16325 207ffc7c2a3482185ae9fcb799ebd213 254 SUPERFAMILY SSF56529 2 251 1.22E-44 T 31-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DY252_16325 207ffc7c2a3482185ae9fcb799ebd213 254 Gene3D G3DSA:3.90.850.10 1 253 5.7E-60 T 31-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DY252_04470 92d9cb2d954d128058d02f7eda6a6f23 65 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 5 48 1.8E-12 T 31-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 DY252_04470 92d9cb2d954d128058d02f7eda6a6f23 65 Pfam PF04995 Heme exporter protein D (CcmD) 8 48 3.5E-11 T 31-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 DY252_19400 02a2eed14fcbee0f6ef7f1c0c30a036e 333 Pfam PF02733 Dak1 domain 17 326 5.9E-116 T 31-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DY252_19400 02a2eed14fcbee0f6ef7f1c0c30a036e 333 Gene3D G3DSA:3.30.1180.20 184 331 9.3E-50 T 31-10-2018 DY252_19400 02a2eed14fcbee0f6ef7f1c0c30a036e 333 Gene3D G3DSA:3.40.50.10440 11 183 1.2E-55 T 31-10-2018 DY252_19400 02a2eed14fcbee0f6ef7f1c0c30a036e 333 SUPERFAMILY SSF82549 10 329 4.71E-113 T 31-10-2018 DY252_20500 9c632f5304edabebcfa48e9b3c96ae61 556 Pfam PF00990 Diguanylate cyclase, GGDEF domain 380 537 1.7E-48 T 31-10-2018 IPR000160 GGDEF domain DY252_20500 9c632f5304edabebcfa48e9b3c96ae61 556 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 376 541 5.0E-44 T 31-10-2018 IPR000160 GGDEF domain DY252_20500 9c632f5304edabebcfa48e9b3c96ae61 556 SUPERFAMILY SSF103190 68 189 7.06E-5 T 31-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DY252_20500 9c632f5304edabebcfa48e9b3c96ae61 556 Pfam PF02743 Cache domain 41 281 3.0E-15 T 31-10-2018 IPR033479 Double Cache domain 1 DY252_20500 9c632f5304edabebcfa48e9b3c96ae61 556 SUPERFAMILY SSF55073 385 544 2.41E-49 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_20500 9c632f5304edabebcfa48e9b3c96ae61 556 Gene3D G3DSA:3.30.450.20 83 187 3.1E-20 T 31-10-2018 DY252_20500 9c632f5304edabebcfa48e9b3c96ae61 556 SMART SM00267 369 542 1.8E-62 T 31-10-2018 IPR000160 GGDEF domain DY252_20500 9c632f5304edabebcfa48e9b3c96ae61 556 Gene3D G3DSA:3.30.70.270 374 547 1.1E-56 T 31-10-2018 DY252_07725 c711b98d7fb0505198173cd8dede9a4f 816 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 184 293 8.2E-6 T 31-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 DY252_07725 c711b98d7fb0505198173cd8dede9a4f 816 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 303 391 1.5E-11 T 31-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 DY252_07725 c711b98d7fb0505198173cd8dede9a4f 816 SMART SM00382 449 711 0.0017 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_07725 c711b98d7fb0505198173cd8dede9a4f 816 Gene3D G3DSA:3.40.50.300 432 507 9.1E-7 T 31-10-2018 DY252_07725 c711b98d7fb0505198173cd8dede9a4f 816 SUPERFAMILY SSF52540 403 750 8.69E-48 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07725 c711b98d7fb0505198173cd8dede9a4f 816 Gene3D G3DSA:3.40.50.300 577 768 6.8E-23 T 31-10-2018 DY252_18345 447ae89997b69428feeae6ee2c82a695 485 SUPERFAMILY SSF56601 104 457 1.58E-64 T 31-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DY252_18345 447ae89997b69428feeae6ee2c82a695 485 Pfam PF00144 Beta-lactamase 160 438 8.4E-21 T 31-10-2018 IPR001466 Beta-lactamase-related DY252_18345 447ae89997b69428feeae6ee2c82a695 485 Gene3D G3DSA:3.40.710.10 133 453 7.3E-60 T 31-10-2018 DY252_20625 ebf9a1e464e3487ce7104ac61f317d51 335 SUPERFAMILY SSF161098 111 318 1.16E-19 T 31-10-2018 IPR035906 MetI-like superfamily DY252_20625 ebf9a1e464e3487ce7104ac61f317d51 335 Gene3D G3DSA:1.10.3720.10 106 325 6.7E-22 T 31-10-2018 IPR035906 MetI-like superfamily DY252_20625 ebf9a1e464e3487ce7104ac61f317d51 335 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 134 332 1.8E-28 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_07760 d1601146df31ebedac8ea5adfdb73ea3 300 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 123 285 6.4E-44 T 31-10-2018 IPR021561 Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system DY252_07760 d1601146df31ebedac8ea5adfdb73ea3 300 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 19 120 1.1E-24 T 31-10-2018 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain DY252_07550 0cb5e1999529ce9e82c50b87efa51846 285 Gene3D G3DSA:1.10.3720.10 18 275 1.0E-61 T 31-10-2018 IPR035906 MetI-like superfamily DY252_07550 0cb5e1999529ce9e82c50b87efa51846 285 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 19 274 4.4E-92 T 31-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 DY252_07550 0cb5e1999529ce9e82c50b87efa51846 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 271 1.5E-15 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_07550 0cb5e1999529ce9e82c50b87efa51846 285 SUPERFAMILY SSF161098 17 267 5.63E-53 T 31-10-2018 IPR035906 MetI-like superfamily DY252_07550 0cb5e1999529ce9e82c50b87efa51846 285 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 17 276 7.2E-120 T 31-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 DY252_19705 a607200c3577890ef1c6bca80f91f7af 201 Gene3D G3DSA:2.30.110.10 5 201 1.2E-62 T 31-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DY252_19705 a607200c3577890ef1c6bca80f91f7af 201 SUPERFAMILY SSF50475 8 193 1.18E-46 T 31-10-2018 DY252_19705 a607200c3577890ef1c6bca80f91f7af 201 Pfam PF01613 Flavin reductase like domain 23 164 3.1E-16 T 31-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DY252_19705 a607200c3577890ef1c6bca80f91f7af 201 SMART SM00903 19 166 2.1E-4 T 31-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DY252_19245 6d38ab5448b2d9ddb0cf53a89ebfab08 323 SMART SM00382 198 320 2.4E-5 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_19245 6d38ab5448b2d9ddb0cf53a89ebfab08 323 Pfam PF00158 Sigma-54 interaction domain 178 322 4.3E-58 T 31-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DY252_19245 6d38ab5448b2d9ddb0cf53a89ebfab08 323 Gene3D G3DSA:3.40.50.300 167 323 1.4E-55 T 31-10-2018 DY252_19245 6d38ab5448b2d9ddb0cf53a89ebfab08 323 SUPERFAMILY SSF52540 177 322 2.1E-43 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_19245 6d38ab5448b2d9ddb0cf53a89ebfab08 323 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 202 215 - T 31-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DY252_09765 996bf5e3e0202d67a5e07789fde25b0a 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 118 8.3E-8 T 31-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DY252_09765 996bf5e3e0202d67a5e07789fde25b0a 123 SUPERFAMILY SSF54593 2 122 5.21E-22 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_09765 996bf5e3e0202d67a5e07789fde25b0a 123 Gene3D G3DSA:3.10.180.10 1 122 1.4E-31 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_15380 9a81c07b8708bf152895bb98257e925e 618 Gene3D G3DSA:1.10.150.130 85 179 7.8E-7 T 31-10-2018 IPR010998 Integrase/recombinase, N-terminal DY252_11210 1813f6dbe40e12c8b14ba0d2b759a4f3 210 PIRSF PIRSF006324 1 209 6.3E-49 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_11210 1813f6dbe40e12c8b14ba0d2b759a4f3 210 Pfam PF01810 LysE type translocator 16 206 3.2E-34 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_14170 c778dddc7a833ba28fbf923cbb980e00 329 SUPERFAMILY SSF56529 117 309 7.51E-23 T 31-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DY252_14170 c778dddc7a833ba28fbf923cbb980e00 329 Gene3D G3DSA:3.90.850.10 101 316 1.1E-13 T 31-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DY252_14170 c778dddc7a833ba28fbf923cbb980e00 329 PIRSF PIRSF033905 1 329 5.3E-163 T 31-10-2018 IPR009645 Uncharacterised conserved protein GguC DY252_12105 b6635d2780fa72c1c1715e4056b71167 222 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 16 218 42.296 T 31-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DY252_12105 b6635d2780fa72c1c1715e4056b71167 222 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 22 213 8.2E-82 T 31-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DY252_12105 b6635d2780fa72c1c1715e4056b71167 222 Gene3D G3DSA:3.90.870.10 4 221 2.7E-87 T 31-10-2018 DY252_12105 b6635d2780fa72c1c1715e4056b71167 222 SUPERFAMILY SSF55821 15 216 1.1E-84 T 31-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DY252_12105 b6635d2780fa72c1c1715e4056b71167 222 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 20 214 7.3E-78 T 31-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DY252_07070 1172deaa4dd0d4befe2b59fef72881b4 105 Gene3D G3DSA:1.10.790.20 1 105 5.3E-22 T 31-10-2018 DY252_07070 1172deaa4dd0d4befe2b59fef72881b4 105 Pfam PF07345 Domain of unknown function (DUF1476) 1 102 1.0E-22 T 31-10-2018 IPR009945 Protein of unknown function DUF1476 DY252_06260 7fe50af830f302fe9feb2db6526381e8 230 Gene3D G3DSA:1.10.3720.10 2 226 4.6E-49 T 31-10-2018 IPR035906 MetI-like superfamily DY252_06260 7fe50af830f302fe9feb2db6526381e8 230 SUPERFAMILY SSF161098 8 220 6.8E-42 T 31-10-2018 IPR035906 MetI-like superfamily DY252_06260 7fe50af830f302fe9feb2db6526381e8 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 27 217 2.6E-16 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_06260 7fe50af830f302fe9feb2db6526381e8 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 13 220 6.6E-61 T 31-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 DY252_15955 585d987a4d62d8a2529d3de05e541b43 356 SUPERFAMILY SSF54506 24 353 2.25E-101 T 31-10-2018 DY252_15955 585d987a4d62d8a2529d3de05e541b43 356 Pfam PF05544 Proline racemase 29 353 1.5E-106 T 31-10-2018 IPR008794 Proline racemase family DY252_15955 585d987a4d62d8a2529d3de05e541b43 356 Gene3D G3DSA:3.10.310.10 165 331 1.6E-124 T 31-10-2018 DY252_15955 585d987a4d62d8a2529d3de05e541b43 356 Gene3D G3DSA:3.10.310.10 29 353 1.6E-124 T 31-10-2018 DY252_15955 585d987a4d62d8a2529d3de05e541b43 356 PIRSF PIRSF029792 22 356 1.6E-108 T 31-10-2018 IPR008794 Proline racemase family DY252_15585 2d5aa1e667fd43ba466cf896388f9848 359 Pfam PF13407 Periplasmic binding protein domain 36 312 6.8E-62 T 31-10-2018 IPR025997 Periplasmic binding protein DY252_15585 2d5aa1e667fd43ba466cf896388f9848 359 SUPERFAMILY SSF53822 33 346 4.07E-66 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_15585 2d5aa1e667fd43ba466cf896388f9848 359 Gene3D G3DSA:3.40.50.2300 138 354 5.5E-130 T 31-10-2018 DY252_15585 2d5aa1e667fd43ba466cf896388f9848 359 Gene3D G3DSA:3.40.50.2300 36 333 5.5E-130 T 31-10-2018 DY252_05080 7edb8f159ccd3146920895c90b3fc0ce 153 Pfam PF01037 Lrp/AsnC ligand binding domain 75 144 1.5E-11 T 31-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DY252_05080 7edb8f159ccd3146920895c90b3fc0ce 153 Gene3D G3DSA:3.30.70.920 57 149 5.2E-15 T 31-10-2018 DY252_05080 7edb8f159ccd3146920895c90b3fc0ce 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 2.0E-14 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_05080 7edb8f159ccd3146920895c90b3fc0ce 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 2.0E-14 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_05080 7edb8f159ccd3146920895c90b3fc0ce 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 2.0E-14 T 31-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DY252_05080 7edb8f159ccd3146920895c90b3fc0ce 153 Gene3D G3DSA:1.10.10.10 5 56 1.6E-22 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_05080 7edb8f159ccd3146920895c90b3fc0ce 153 SMART SM00344 4 113 2.1E-34 T 31-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DY252_05080 7edb8f159ccd3146920895c90b3fc0ce 153 SUPERFAMILY SSF54909 68 149 1.74E-11 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_05080 7edb8f159ccd3146920895c90b3fc0ce 153 SUPERFAMILY SSF46785 4 63 2.89E-17 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_05080 7edb8f159ccd3146920895c90b3fc0ce 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 5.3E-19 T 31-10-2018 DY252_05080 7edb8f159ccd3146920895c90b3fc0ce 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 31-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DY252_10715 c53d836783e76bf4ace53019be8ced2e 157 SUPERFAMILY SSF53927 5 145 1.77E-31 T 31-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DY252_10715 c53d836783e76bf4ace53019be8ced2e 157 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 113 6.9E-25 T 31-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DY252_10715 c53d836783e76bf4ace53019be8ced2e 157 PIRSF PIRSF006019 1 153 1.7E-42 T 31-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DY252_10715 c53d836783e76bf4ace53019be8ced2e 157 Gene3D G3DSA:3.40.140.10 1 155 8.0E-42 T 31-10-2018 DY252_10715 c53d836783e76bf4ace53019be8ced2e 157 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 68 103 - T 31-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DY252_20680 af73ab258b61dbd971e0361db8052512 423 SUPERFAMILY SSF55961 157 414 1.02E-48 T 31-10-2018 DY252_20680 af73ab258b61dbd971e0361db8052512 423 Pfam PF00355 Rieske [2Fe-2S] domain 41 122 1.3E-16 T 31-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DY252_20680 af73ab258b61dbd971e0361db8052512 423 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 26 51 3.9E-22 T 31-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DY252_20680 af73ab258b61dbd971e0361db8052512 423 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 98 118 3.9E-22 T 31-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DY252_20680 af73ab258b61dbd971e0361db8052512 423 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 137 163 3.9E-22 T 31-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DY252_20680 af73ab258b61dbd971e0361db8052512 423 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 175 197 3.9E-22 T 31-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DY252_20680 af73ab258b61dbd971e0361db8052512 423 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 77 97 3.9E-22 T 31-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DY252_20680 af73ab258b61dbd971e0361db8052512 423 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 56 71 3.9E-22 T 31-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 DY252_20680 af73ab258b61dbd971e0361db8052512 423 Gene3D G3DSA:3.90.380.10 14 406 4.5E-149 T 31-10-2018 DY252_20680 af73ab258b61dbd971e0361db8052512 423 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 175 410 8.8E-43 T 31-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 DY252_20680 af73ab258b61dbd971e0361db8052512 423 Gene3D G3DSA:2.102.10.10 39 158 4.5E-149 T 31-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DY252_20680 af73ab258b61dbd971e0361db8052512 423 SUPERFAMILY SSF50022 12 152 3.4E-43 T 31-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DY252_16310 7f9c7043069d8e616bf52945e7d4149d 181 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 37 158 2.3E-17 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_16215 93e496fbdb6522bb556de9134c6769a1 197 Pfam PF09335 SNARE associated Golgi protein 29 149 2.9E-11 T 31-10-2018 IPR032816 SNARE associated Golgi protein DY252_10835 f0a65fe129aa2d6188704f89fbed9c23 186 Gene3D G3DSA:2.60.120.10 4 183 2.2E-60 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_10835 f0a65fe129aa2d6188704f89fbed9c23 186 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 3 175 7.0E-57 T 31-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DY252_10835 f0a65fe129aa2d6188704f89fbed9c23 186 SUPERFAMILY SSF51182 4 181 3.32E-62 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_10835 f0a65fe129aa2d6188704f89fbed9c23 186 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 9 178 2.8E-57 T 31-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DY252_00705 5cec706ab2086f052eb4355962953bcc 304 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 38 130 7.3E-5 T 31-10-2018 DY252_00705 5cec706ab2086f052eb4355962953bcc 304 Gene3D G3DSA:3.40.50.150 26 156 7.6E-11 T 31-10-2018 DY252_00705 5cec706ab2086f052eb4355962953bcc 304 SUPERFAMILY SSF53335 39 234 1.55E-15 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_20465 767e70038a0d6c7384f40a73b8094306 63 Pfam PF13396 Phospholipase_D-nuclease N-terminal 14 55 4.9E-10 T 31-10-2018 IPR027379 Cardiolipin synthase N-terminal DY252_18445 f158799481a6d5bbebd8d79a53b6b417 714 Gene3D G3DSA:1.20.1560.10 154 466 2.5E-51 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_18445 f158799481a6d5bbebd8d79a53b6b417 714 Gene3D G3DSA:3.90.70.10 25 136 2.1E-7 T 31-10-2018 DY252_18445 f158799481a6d5bbebd8d79a53b6b417 714 Gene3D G3DSA:3.40.50.300 471 713 2.4E-74 T 31-10-2018 DY252_18445 f158799481a6d5bbebd8d79a53b6b417 714 SUPERFAMILY SSF90123 150 464 7.06E-51 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_18445 f158799481a6d5bbebd8d79a53b6b417 714 Pfam PF00664 ABC transporter transmembrane region 171 428 1.8E-25 T 31-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DY252_18445 f158799481a6d5bbebd8d79a53b6b417 714 SUPERFAMILY SSF52540 473 706 4.2E-64 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18445 f158799481a6d5bbebd8d79a53b6b417 714 Pfam PF00005 ABC transporter 500 648 2.1E-30 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_18445 f158799481a6d5bbebd8d79a53b6b417 714 SMART SM00382 507 702 4.0E-17 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_01120 f8838d7c2c5044a05e7364362a9c34a2 367 Gene3D G3DSA:3.40.50.300 130 337 4.5E-73 T 31-10-2018 DY252_01120 f8838d7c2c5044a05e7364362a9c34a2 367 Pfam PF02562 PhoH-like protein 134 337 6.0E-91 T 31-10-2018 IPR003714 PhoH-like protein GO:0005524 DY252_01120 f8838d7c2c5044a05e7364362a9c34a2 367 SUPERFAMILY SSF54791 30 83 5.99E-5 T 31-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DY252_01120 f8838d7c2c5044a05e7364362a9c34a2 367 SUPERFAMILY SSF52540 133 312 4.38E-40 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18465 497a421b6f77a421f7eb9f002c2925c8 153 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 11 149 1.9E-64 T 31-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 DY252_18465 497a421b6f77a421f7eb9f002c2925c8 153 SUPERFAMILY SSF46955 9 121 8.79E-27 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_18465 497a421b6f77a421f7eb9f002c2925c8 153 ProSitePatterns PS00552 MerR-type HTH domain signature. 14 36 - T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_18465 497a421b6f77a421f7eb9f002c2925c8 153 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 12 23 1.8E-10 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_18465 497a421b6f77a421f7eb9f002c2925c8 153 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 46 66 1.8E-10 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_18465 497a421b6f77a421f7eb9f002c2925c8 153 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 23 36 1.8E-10 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_18465 497a421b6f77a421f7eb9f002c2925c8 153 Pfam PF09278 MerR, DNA binding 53 118 5.5E-15 T 31-10-2018 IPR015358 Transcription regulator MerR, DNA binding DY252_18465 497a421b6f77a421f7eb9f002c2925c8 153 SMART SM00422 11 79 2.4E-23 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_18465 497a421b6f77a421f7eb9f002c2925c8 153 Pfam PF00376 MerR family regulatory protein 12 48 2.6E-12 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_18465 497a421b6f77a421f7eb9f002c2925c8 153 Gene3D G3DSA:1.10.1660.10 4 134 7.0E-31 T 31-10-2018 DY252_22125 ca7d1d2d64975c74fd68e8de9d205b1b 301 SUPERFAMILY SSF46785 1 86 3.97E-16 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_22125 ca7d1d2d64975c74fd68e8de9d205b1b 301 Gene3D G3DSA:3.40.190.290 92 296 4.9E-35 T 31-10-2018 DY252_22125 ca7d1d2d64975c74fd68e8de9d205b1b 301 Gene3D G3DSA:1.10.10.10 1 91 2.5E-17 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_22125 ca7d1d2d64975c74fd68e8de9d205b1b 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.1E-15 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_22125 ca7d1d2d64975c74fd68e8de9d205b1b 301 Pfam PF03466 LysR substrate binding domain 91 291 4.0E-32 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_22125 ca7d1d2d64975c74fd68e8de9d205b1b 301 SUPERFAMILY SSF53850 91 295 8.69E-34 T 31-10-2018 DY252_22125 ca7d1d2d64975c74fd68e8de9d205b1b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_22125 ca7d1d2d64975c74fd68e8de9d205b1b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_22125 ca7d1d2d64975c74fd68e8de9d205b1b 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_17975 c0424e75fd1b358726a6d445ac37ebd7 195 Gene3D G3DSA:3.40.50.300 4 182 1.2E-58 T 31-10-2018 DY252_17975 c0424e75fd1b358726a6d445ac37ebd7 195 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 8 175 1.1E-52 T 31-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 DY252_17975 c0424e75fd1b358726a6d445ac37ebd7 195 Pfam PF13671 AAA domain 8 134 1.3E-7 T 31-10-2018 DY252_17975 c0424e75fd1b358726a6d445ac37ebd7 195 SUPERFAMILY SSF52540 4 177 2.86E-23 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_01135 4be0f2e7350b44edd07661966903f724 264 Gene3D G3DSA:3.40.630.30 10 158 3.4E-19 T 31-10-2018 DY252_01135 4be0f2e7350b44edd07661966903f724 264 SUPERFAMILY SSF55729 9 233 2.54E-37 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_01135 4be0f2e7350b44edd07661966903f724 264 Pfam PF13444 Acetyltransferase (GNAT) domain 27 137 3.2E-32 T 31-10-2018 DY252_06670 14457cb931cad93d9c6d521f24243903 380 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 366 54.011 T 31-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DY252_06670 14457cb931cad93d9c6d521f24243903 380 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 365 5.1E-144 T 31-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DY252_06670 14457cb931cad93d9c6d521f24243903 380 Pfam PF01702 Queuine tRNA-ribosyltransferase 130 363 8.8E-80 T 31-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DY252_06670 14457cb931cad93d9c6d521f24243903 380 Gene3D G3DSA:3.20.20.105 1 369 5.0E-158 T 31-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DY252_06670 14457cb931cad93d9c6d521f24243903 380 SUPERFAMILY SSF51713 2 364 1.57E-150 T 31-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DY252_06670 14457cb931cad93d9c6d521f24243903 380 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 365 1.7E-148 T 31-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DY252_05695 243058c439f9d313c4fa12f9dcaf67ba 309 PIRSF PIRSF020481 5 309 4.5E-95 T 31-10-2018 IPR014507 Baseplate assembly protein J, predicted DY252_05695 243058c439f9d313c4fa12f9dcaf67ba 309 Pfam PF04865 Baseplate J-like protein 122 264 2.2E-28 T 31-10-2018 IPR006949 Baseplate protein J-like DY252_14885 6099462437b606a4ecb9cb91295855d7 462 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 139 157 2.4E-16 T 31-10-2018 DY252_14885 6099462437b606a4ecb9cb91295855d7 462 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 82 107 2.4E-16 T 31-10-2018 DY252_14885 6099462437b606a4ecb9cb91295855d7 462 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 157 176 2.4E-16 T 31-10-2018 DY252_14885 6099462437b606a4ecb9cb91295855d7 462 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 255 271 2.4E-16 T 31-10-2018 DY252_14885 6099462437b606a4ecb9cb91295855d7 462 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 456 462 2.4E-16 T 31-10-2018 DY252_14885 6099462437b606a4ecb9cb91295855d7 462 SUPERFAMILY SSF56235 55 395 1.79E-59 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_14885 6099462437b606a4ecb9cb91295855d7 462 Pfam PF01019 Gamma-glutamyltranspeptidase 75 289 1.2E-49 T 31-10-2018 DY252_16235 1f2d12365efea3802be6d74b01fa807f 377 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 45 63 - T 31-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site DY252_16235 1f2d12365efea3802be6d74b01fa807f 377 Gene3D G3DSA:3.20.20.10 24 262 1.4E-95 T 31-10-2018 IPR029066 PLP-binding barrel DY252_16235 1f2d12365efea3802be6d74b01fa807f 377 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 202 218 - T 31-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site DY252_16235 1f2d12365efea3802be6d74b01fa807f 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 167 180 1.1E-18 T 31-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DY252_16235 1f2d12365efea3802be6d74b01fa807f 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 45 63 1.1E-18 T 31-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DY252_16235 1f2d12365efea3802be6d74b01fa807f 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 250 269 1.1E-18 T 31-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DY252_16235 1f2d12365efea3802be6d74b01fa807f 377 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 65 77 1.1E-18 T 31-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DY252_16235 1f2d12365efea3802be6d74b01fa807f 377 Gene3D G3DSA:2.40.37.10 17 370 1.4E-95 T 31-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DY252_16235 1f2d12365efea3802be6d74b01fa807f 377 PRINTS PR01182 Ornithine decarboxylase signature 17 41 6.5E-22 T 31-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 DY252_16235 1f2d12365efea3802be6d74b01fa807f 377 PRINTS PR01182 Ornithine decarboxylase signature 43 70 6.5E-22 T 31-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 DY252_16235 1f2d12365efea3802be6d74b01fa807f 377 PRINTS PR01182 Ornithine decarboxylase signature 319 329 6.5E-22 T 31-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 DY252_16235 1f2d12365efea3802be6d74b01fa807f 377 PRINTS PR01182 Ornithine decarboxylase signature 87 111 6.5E-22 T 31-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 DY252_16235 1f2d12365efea3802be6d74b01fa807f 377 PRINTS PR01182 Ornithine decarboxylase signature 117 139 6.5E-22 T 31-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 DY252_16235 1f2d12365efea3802be6d74b01fa807f 377 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 26 259 1.9E-55 T 31-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DY252_16235 1f2d12365efea3802be6d74b01fa807f 377 SUPERFAMILY SSF50621 227 376 1.95E-30 T 31-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DY252_16235 1f2d12365efea3802be6d74b01fa807f 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 260 355 2.1E-11 T 31-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 DY252_16235 1f2d12365efea3802be6d74b01fa807f 377 SUPERFAMILY SSF51419 17 262 5.52E-68 T 31-10-2018 IPR029066 PLP-binding barrel DY252_03195 bdc715f4396f46aa1a094312c68ba63f 177 Gene3D G3DSA:3.30.450.20 23 120 7.8E-19 T 31-10-2018 DY252_03195 bdc715f4396f46aa1a094312c68ba63f 177 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 27 115 4.7E-9 T 31-10-2018 IPR000014 PAS domain DY252_03195 bdc715f4396f46aa1a094312c68ba63f 177 Pfam PF08447 PAS fold 34 115 4.4E-11 T 31-10-2018 IPR013655 PAS fold-3 GO:0005515 DY252_03195 bdc715f4396f46aa1a094312c68ba63f 177 SUPERFAMILY SSF55785 23 117 8.38E-24 T 31-10-2018 IPR035965 PAS domain superfamily DY252_03170 06b11c3d60c0375b98765f2a350d7ff0 543 Pfam PF00005 ABC transporter 42 186 6.9E-36 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_03170 06b11c3d60c0375b98765f2a350d7ff0 543 Gene3D G3DSA:3.40.50.300 272 512 2.8E-34 T 31-10-2018 DY252_03170 06b11c3d60c0375b98765f2a350d7ff0 543 SUPERFAMILY SSF52540 26 243 4.08E-64 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_03170 06b11c3d60c0375b98765f2a350d7ff0 543 SUPERFAMILY SSF52540 274 503 2.13E-35 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_03170 06b11c3d60c0375b98765f2a350d7ff0 543 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_03170 06b11c3d60c0375b98765f2a350d7ff0 543 Gene3D G3DSA:3.40.50.300 17 258 2.9E-62 T 31-10-2018 DY252_03170 06b11c3d60c0375b98765f2a350d7ff0 543 SMART SM00382 50 242 6.5E-7 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_03170 06b11c3d60c0375b98765f2a350d7ff0 543 Pfam PF00005 ABC transporter 291 449 2.0E-9 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_03170 06b11c3d60c0375b98765f2a350d7ff0 543 ProSitePatterns PS00211 ABC transporters family signature. 422 436 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_06525 1a774a79f164f8f771baf95dd1ab7709 353 Pfam PF01544 CorA-like Mg2+ transporter protein 60 349 2.3E-63 T 31-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 DY252_06525 1a774a79f164f8f771baf95dd1ab7709 353 SUPERFAMILY SSF144083 288 351 4.97E-21 T 31-10-2018 DY252_06525 1a774a79f164f8f771baf95dd1ab7709 353 Gene3D G3DSA:3.30.460.20 13 160 8.6E-10 T 31-10-2018 DY252_06525 1a774a79f164f8f771baf95dd1ab7709 353 Gene3D G3DSA:1.20.58.340 277 353 1.6E-28 T 31-10-2018 DY252_06525 1a774a79f164f8f771baf95dd1ab7709 353 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 59 353 7.5E-65 T 31-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 DY252_06525 1a774a79f164f8f771baf95dd1ab7709 353 SUPERFAMILY SSF143865 59 292 5.62E-38 T 31-10-2018 DY252_07295 1f154bb6f942a2ed2ceca73dd0af497e 530 SUPERFAMILY SSF52540 147 518 1.01E-9 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07295 1f154bb6f942a2ed2ceca73dd0af497e 530 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 473 517 2.0E-5 T 31-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 DY252_07295 1f154bb6f942a2ed2ceca73dd0af497e 530 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 137 397 1.1E-20 T 31-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 DY252_07295 1f154bb6f942a2ed2ceca73dd0af497e 530 Gene3D G3DSA:3.40.50.300 283 517 1.2E-8 T 31-10-2018 DY252_09055 141969e0a6decfd0fb5216c050615014 191 Pfam PF03719 Ribosomal protein S5, C-terminal domain 96 167 7.5E-29 T 31-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 DY252_09055 141969e0a6decfd0fb5216c050615014 191 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 18 172 1.1E-63 T 31-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 DY252_09055 141969e0a6decfd0fb5216c050615014 191 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 173 35.652 T 31-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 DY252_09055 141969e0a6decfd0fb5216c050615014 191 SUPERFAMILY SSF54768 17 85 4.92E-23 T 31-10-2018 DY252_09055 141969e0a6decfd0fb5216c050615014 191 Gene3D G3DSA:3.30.160.20 11 82 2.8E-30 T 31-10-2018 DY252_09055 141969e0a6decfd0fb5216c050615014 191 Pfam PF00333 Ribosomal protein S5, N-terminal domain 20 84 5.2E-29 T 31-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 DY252_09055 141969e0a6decfd0fb5216c050615014 191 ProSitePatterns PS00585 Ribosomal protein S5 signature. 37 69 - T 31-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site DY252_09055 141969e0a6decfd0fb5216c050615014 191 Gene3D G3DSA:3.30.230.10 85 177 1.9E-32 T 31-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DY252_09055 141969e0a6decfd0fb5216c050615014 191 SUPERFAMILY SSF54211 89 168 2.43E-25 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_07170 bdc4dcd71f901f7a0b405ade37776bd5 299 Pfam PF08241 Methyltransferase domain 53 144 1.3E-13 T 31-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DY252_07170 bdc4dcd71f901f7a0b405ade37776bd5 299 SUPERFAMILY SSF53335 35 223 2.13E-26 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_07170 bdc4dcd71f901f7a0b405ade37776bd5 299 Gene3D G3DSA:3.40.50.150 33 270 6.6E-21 T 31-10-2018 DY252_00800 6a74957cf587397451dc4547931de93a 293 Gene3D G3DSA:3.40.50.720 1 289 7.0E-103 T 31-10-2018 DY252_00800 6a74957cf587397451dc4547931de93a 293 SUPERFAMILY SSF51735 11 290 1.1E-36 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_09790 40121f5d82ba45ff8e13c7f2ea3f6a16 261 SUPERFAMILY SSF52096 6 260 2.05E-62 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_09790 40121f5d82ba45ff8e13c7f2ea3f6a16 261 Gene3D G3DSA:3.90.226.10 1 205 7.9E-55 T 31-10-2018 DY252_09790 40121f5d82ba45ff8e13c7f2ea3f6a16 261 Gene3D G3DSA:1.10.12.10 206 261 3.0E-22 T 31-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DY252_09790 40121f5d82ba45ff8e13c7f2ea3f6a16 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 260 1.7E-40 T 31-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DY252_17535 576eacdf4136780909f78083028a5acc 383 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 307 375 1.4E-16 T 31-10-2018 IPR001543 Surface presentation of antigen (SpoA) DY252_17535 576eacdf4136780909f78083028a5acc 383 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 66 376 7.4E-89 T 31-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DY252_17535 576eacdf4136780909f78083028a5acc 383 SUPERFAMILY SSF101801 303 378 6.02E-13 T 31-10-2018 IPR036429 SpoA-like superfamily DY252_17535 576eacdf4136780909f78083028a5acc 383 Gene3D G3DSA:3.40.1550.10 100 286 4.6E-51 T 31-10-2018 IPR028976 CheC-like superfamily DY252_17535 576eacdf4136780909f78083028a5acc 383 Pfam PF02154 Flagellar motor switch protein FliM 94 285 2.5E-64 T 31-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DY252_17535 576eacdf4136780909f78083028a5acc 383 PRINTS PR00955 Flagellar motor switch protein FliM signature 143 159 5.5E-23 T 31-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DY252_17535 576eacdf4136780909f78083028a5acc 383 PRINTS PR00955 Flagellar motor switch protein FliM signature 65 78 5.5E-23 T 31-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DY252_17535 576eacdf4136780909f78083028a5acc 383 PRINTS PR00955 Flagellar motor switch protein FliM signature 267 285 5.5E-23 T 31-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DY252_17535 576eacdf4136780909f78083028a5acc 383 PRINTS PR00955 Flagellar motor switch protein FliM signature 168 187 5.5E-23 T 31-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DY252_17535 576eacdf4136780909f78083028a5acc 383 PIRSF PIRSF002888 8 383 3.1E-89 T 31-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DY252_13435 0f89c9c1f17cab4f56bfbf97c29a8447 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 327 346 2.5E-47 T 31-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13435 0f89c9c1f17cab4f56bfbf97c29a8447 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 239 263 2.5E-47 T 31-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13435 0f89c9c1f17cab4f56bfbf97c29a8447 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 2.5E-47 T 31-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13435 0f89c9c1f17cab4f56bfbf97c29a8447 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 140 159 2.5E-47 T 31-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13435 0f89c9c1f17cab4f56bfbf97c29a8447 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 170 194 2.5E-47 T 31-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13435 0f89c9c1f17cab4f56bfbf97c29a8447 505 Pfam PF00361 Proton-conducting membrane transporter 136 418 2.5E-89 T 31-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13435 0f89c9c1f17cab4f56bfbf97c29a8447 505 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 489 1.2E-194 T 31-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_06855 9d411c7ba4870d4f494ee725ff746ed9 332 Gene3D G3DSA:3.40.50.720 129 297 1.6E-120 T 31-10-2018 DY252_06855 9d411c7ba4870d4f494ee725ff746ed9 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 90 4.2E-5 T 31-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DY252_06855 9d411c7ba4870d4f494ee725ff746ed9 332 SMART SM00829 16 306 4.5E-6 T 31-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DY252_06855 9d411c7ba4870d4f494ee725ff746ed9 332 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 6 329 1.5E-135 T 31-10-2018 IPR014188 Acrylyl-CoA reductase AcuI DY252_06855 9d411c7ba4870d4f494ee725ff746ed9 332 Pfam PF00107 Zinc-binding dehydrogenase 163 272 1.9E-12 T 31-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DY252_06855 9d411c7ba4870d4f494ee725ff746ed9 332 SUPERFAMILY SSF50129 5 147 1.08E-43 T 31-10-2018 IPR011032 GroES-like superfamily DY252_06855 9d411c7ba4870d4f494ee725ff746ed9 332 Gene3D G3DSA:3.90.180.10 20 327 1.6E-120 T 31-10-2018 DY252_06855 9d411c7ba4870d4f494ee725ff746ed9 332 SUPERFAMILY SSF51735 119 294 3.72E-39 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_07425 1173254e66f6ecc462058510b5c46117 205 Gene3D G3DSA:3.40.50.1950 5 197 2.1E-77 T 31-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DY252_07425 1173254e66f6ecc462058510b5c46117 205 SUPERFAMILY SSF52507 6 188 6.54E-61 T 31-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DY252_07425 1173254e66f6ecc462058510b5c46117 205 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 6 186 1.4E-73 T 31-10-2018 IPR004507 Flavin prenyltransferase UbiX-like DY252_07425 1173254e66f6ecc462058510b5c46117 205 Pfam PF02441 Flavoprotein 6 167 3.3E-27 T 31-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DY252_07425 1173254e66f6ecc462058510b5c46117 205 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 5 188 36.245 T 31-10-2018 IPR004507 Flavin prenyltransferase UbiX-like DY252_01680 2f5caabdfe2ca37ee319a349d03f6e59 231 Gene3D G3DSA:3.20.20.10 9 231 2.0E-74 T 31-10-2018 IPR029066 PLP-binding barrel DY252_01680 2f5caabdfe2ca37ee319a349d03f6e59 231 PIRSF PIRSF004848 6 231 4.5E-60 T 31-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DY252_01680 2f5caabdfe2ca37ee319a349d03f6e59 231 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 12 229 1.5E-47 T 31-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DY252_01680 2f5caabdfe2ca37ee319a349d03f6e59 231 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 15 228 24.817 T 31-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DY252_01680 2f5caabdfe2ca37ee319a349d03f6e59 231 Pfam PF01168 Alanine racemase, N-terminal domain 17 229 3.9E-23 T 31-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DY252_01680 2f5caabdfe2ca37ee319a349d03f6e59 231 SUPERFAMILY SSF51419 9 227 1.89E-69 T 31-10-2018 IPR029066 PLP-binding barrel DY252_02975 1ea6062b8ba39eb25c7f936a3bdda58e 227 PRINTS PR00604 Class IA and IB cytochrome C signature 128 144 2.9E-13 T 31-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_02975 1ea6062b8ba39eb25c7f936a3bdda58e 227 PRINTS PR00604 Class IA and IB cytochrome C signature 85 92 2.9E-13 T 31-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_02975 1ea6062b8ba39eb25c7f936a3bdda58e 227 PRINTS PR00604 Class IA and IB cytochrome C signature 147 157 2.9E-13 T 31-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_02975 1ea6062b8ba39eb25c7f936a3bdda58e 227 PRINTS PR00604 Class IA and IB cytochrome C signature 98 113 2.9E-13 T 31-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_02975 1ea6062b8ba39eb25c7f936a3bdda58e 227 PRINTS PR00604 Class IA and IB cytochrome C signature 114 124 2.9E-13 T 31-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_02975 1ea6062b8ba39eb25c7f936a3bdda58e 227 Gene3D G3DSA:1.10.760.10 41 173 5.2E-39 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_02975 1ea6062b8ba39eb25c7f936a3bdda58e 227 SUPERFAMILY SSF46626 73 176 4.46E-31 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_02975 1ea6062b8ba39eb25c7f936a3bdda58e 227 Pfam PF00034 Cytochrome c 78 172 1.9E-9 T 31-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_00785 12e28b27c4c1d730cb8df40f3e6a771f 372 Pfam PF01888 CbiD 9 269 9.9E-88 T 31-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DY252_00785 12e28b27c4c1d730cb8df40f3e6a771f 372 PIRSF PIRSF026782 6 363 9.9E-124 T 31-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DY252_00785 12e28b27c4c1d730cb8df40f3e6a771f 372 SUPERFAMILY SSF111342 4 286 1.02E-83 T 31-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DY252_00785 12e28b27c4c1d730cb8df40f3e6a771f 372 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 16 355 7.8E-53 T 31-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DY252_00785 12e28b27c4c1d730cb8df40f3e6a771f 372 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 9 359 27.549 T 31-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DY252_00785 12e28b27c4c1d730cb8df40f3e6a771f 372 Gene3D G3DSA:3.30.2110.10 11 184 3.3E-48 T 31-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 DY252_09185 25974dc51126f6d2f5aec0bca33d761c 321 Gene3D G3DSA:1.20.1560.10 4 321 2.1E-32 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_09185 25974dc51126f6d2f5aec0bca33d761c 321 SUPERFAMILY SSF90123 20 316 4.58E-35 T 31-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DY252_07975 bcf6dd4ff869cc512bbe98ea0b135cc0 236 Gene3D G3DSA:1.10.10.10 21 88 8.5E-20 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_07975 bcf6dd4ff869cc512bbe98ea0b135cc0 236 SMART SM00895 96 220 4.5E-16 T 31-10-2018 IPR011711 GntR, C-terminal DY252_07975 bcf6dd4ff869cc512bbe98ea0b135cc0 236 Pfam PF07729 FCD domain 100 219 2.8E-22 T 31-10-2018 IPR011711 GntR, C-terminal DY252_07975 bcf6dd4ff869cc512bbe98ea0b135cc0 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 5.1E-5 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_07975 bcf6dd4ff869cc512bbe98ea0b135cc0 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 5.1E-5 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_07975 bcf6dd4ff869cc512bbe98ea0b135cc0 236 Gene3D G3DSA:1.20.120.530 90 232 3.0E-22 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_07975 bcf6dd4ff869cc512bbe98ea0b135cc0 236 SUPERFAMILY SSF48008 92 225 3.4E-23 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_07975 bcf6dd4ff869cc512bbe98ea0b135cc0 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 86 7.2E-16 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_07975 bcf6dd4ff869cc512bbe98ea0b135cc0 236 SUPERFAMILY SSF46785 20 102 2.49E-17 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_07975 bcf6dd4ff869cc512bbe98ea0b135cc0 236 SMART SM00345 28 86 4.2E-12 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_03770 d1bc133d9d087fe4bd585b522739a402 286 Pfam PF08386 TAP-like protein 195 250 2.3E-4 T 31-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal DY252_03770 d1bc133d9d087fe4bd585b522739a402 286 Pfam PF07859 alpha/beta hydrolase fold 61 154 1.4E-9 T 31-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DY252_03770 d1bc133d9d087fe4bd585b522739a402 286 SUPERFAMILY SSF53474 31 252 3.75E-44 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_03770 d1bc133d9d087fe4bd585b522739a402 286 Gene3D G3DSA:3.40.50.1820 28 256 7.7E-51 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_18655 534d3850b4507eed71a16277e3edd879 318 Gene3D G3DSA:3.90.226.10 1 314 1.8E-117 T 31-10-2018 DY252_18655 534d3850b4507eed71a16277e3edd879 318 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 147 1.8E-62 T 31-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DY252_18655 534d3850b4507eed71a16277e3edd879 318 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 314 5.3E-126 T 31-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DY252_18655 534d3850b4507eed71a16277e3edd879 318 SUPERFAMILY SSF52096 4 314 3.13E-99 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_18655 534d3850b4507eed71a16277e3edd879 318 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 47.783 T 31-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DY252_18655 534d3850b4507eed71a16277e3edd879 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 3.8E-40 T 31-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DY252_18655 534d3850b4507eed71a16277e3edd879 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 3.8E-40 T 31-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DY252_18655 534d3850b4507eed71a16277e3edd879 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 3.8E-40 T 31-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DY252_18655 534d3850b4507eed71a16277e3edd879 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 3.8E-40 T 31-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DY252_18655 534d3850b4507eed71a16277e3edd879 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 3.8E-40 T 31-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DY252_18655 534d3850b4507eed71a16277e3edd879 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 3.8E-40 T 31-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DY252_10970 f71012609217e2aedc3a011ba118a8c9 469 Pfam PF14559 Tetratricopeptide repeat 58 112 1.9E-7 T 31-10-2018 DY252_10970 f71012609217e2aedc3a011ba118a8c9 469 Pfam PF05036 Sporulation related domain 396 467 8.6E-7 T 31-10-2018 IPR007730 Sporulation-like domain GO:0042834 DY252_10970 f71012609217e2aedc3a011ba118a8c9 469 Gene3D G3DSA:1.25.40.10 41 137 7.4E-11 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_10970 f71012609217e2aedc3a011ba118a8c9 469 SUPERFAMILY SSF48452 49 112 3.57E-10 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_22075 7807be7326a61132368915f15758d58a 261 Pfam PF12686 Protein of unknown function (DUF3800) 7 226 4.6E-20 T 31-10-2018 IPR024524 Protein of unknown function DUF3800 DY252_11135 b8f66051a19188319e1f1156e60831db 132 Gene3D G3DSA:3.10.20.400 2 98 4.3E-39 T 31-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 DY252_11135 b8f66051a19188319e1f1156e60831db 132 SUPERFAMILY SSF141734 7 119 6.41E-48 T 31-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 DY252_11135 b8f66051a19188319e1f1156e60831db 132 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 34 107 2.2E-33 T 31-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DY252_11135 b8f66051a19188319e1f1156e60831db 132 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 57 107 8.0E-17 T 31-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DY252_11135 b8f66051a19188319e1f1156e60831db 132 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 8 111 30.479 T 31-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DY252_14615 a26e20a2fea6632564f40e7f80878e63 155 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 150 1.2E-21 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_17070 53ec3244aa95904ab99511055660d0e6 311 Gene3D G3DSA:3.40.190.10 44 263 1.6E-8 T 31-10-2018 DY252_17070 53ec3244aa95904ab99511055660d0e6 311 SUPERFAMILY SSF53850 33 267 6.52E-13 T 31-10-2018 DY252_17070 53ec3244aa95904ab99511055660d0e6 311 Gene3D G3DSA:3.40.190.10 126 240 1.6E-8 T 31-10-2018 DY252_17070 53ec3244aa95904ab99511055660d0e6 311 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 279 7.0E-9 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_08000 e05ed15bc21c98e9009cff5abcfedf2f 393 SUPERFAMILY SSF56529 164 368 3.4E-23 T 31-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DY252_08000 e05ed15bc21c98e9009cff5abcfedf2f 393 Gene3D G3DSA:3.90.850.10 154 373 1.1E-38 T 31-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DY252_08000 e05ed15bc21c98e9009cff5abcfedf2f 393 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 224 367 1.2E-5 T 31-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DY252_04675 9f2f8a829de666c0056e65858607ad99 378 Gene3D G3DSA:2.60.120.10 254 351 8.7E-6 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_04675 9f2f8a829de666c0056e65858607ad99 378 Pfam PF04209 homogentisate 1,2-dioxygenase 84 374 2.4E-14 T 31-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 DY252_04675 9f2f8a829de666c0056e65858607ad99 378 Gene3D G3DSA:2.60.120.10 76 163 1.4E-7 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_04675 9f2f8a829de666c0056e65858607ad99 378 SUPERFAMILY SSF51182 40 375 9.56E-59 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_05910 1f026818255203055657580da59f3e70 507 Pfam PF13247 4Fe-4S dicluster domain 175 271 6.1E-38 T 31-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DY252_05910 1f026818255203055657580da59f3e70 507 Gene3D G3DSA:3.30.70.20 1 302 2.8E-99 T 31-10-2018 DY252_05910 1f026818255203055657580da59f3e70 507 Gene3D G3DSA:1.10.3650.10 358 434 1.8E-30 T 31-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 DY252_05910 1f026818255203055657580da59f3e70 507 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 435 7.8E-31 T 31-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 DY252_05910 1f026818255203055657580da59f3e70 507 SUPERFAMILY SSF54862 1 489 4.08E-175 T 31-10-2018 DY252_05910 1f026818255203055657580da59f3e70 507 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 489 1.8E-292 T 31-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 DY252_01375 12d17a7f5f03617ed2e1c6f605e710f7 258 Gene3D G3DSA:3.40.50.720 2 256 5.1E-68 T 31-10-2018 DY252_01375 12d17a7f5f03617ed2e1c6f605e710f7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 1.3E-37 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_01375 12d17a7f5f03617ed2e1c6f605e710f7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.3E-37 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_01375 12d17a7f5f03617ed2e1c6f605e710f7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.3E-37 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_01375 12d17a7f5f03617ed2e1c6f605e710f7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.3E-37 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_01375 12d17a7f5f03617ed2e1c6f605e710f7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.3E-37 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_01375 12d17a7f5f03617ed2e1c6f605e710f7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.3E-37 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_01375 12d17a7f5f03617ed2e1c6f605e710f7 258 SUPERFAMILY SSF51735 15 257 5.07E-67 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_01375 12d17a7f5f03617ed2e1c6f605e710f7 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 1.4E-7 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_01375 12d17a7f5f03617ed2e1c6f605e710f7 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 1.4E-7 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_01375 12d17a7f5f03617ed2e1c6f605e710f7 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 1.4E-7 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_01375 12d17a7f5f03617ed2e1c6f605e710f7 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 194 0.0018 T 31-10-2018 DY252_01375 12d17a7f5f03617ed2e1c6f605e710f7 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 254 6.3E-53 T 31-10-2018 DY252_01375 12d17a7f5f03617ed2e1c6f605e710f7 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_16810 a6174920497cf659ebe8417e2243286c 296 SUPERFAMILY SSF103481 184 284 1.7E-8 T 31-10-2018 DY252_16810 a6174920497cf659ebe8417e2243286c 296 SUPERFAMILY SSF103481 42 142 7.32E-15 T 31-10-2018 DY252_16810 a6174920497cf659ebe8417e2243286c 296 Pfam PF00892 EamA-like transporter family 7 139 3.8E-22 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_16810 a6174920497cf659ebe8417e2243286c 296 Pfam PF00892 EamA-like transporter family 151 283 5.8E-15 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_08815 87a01c37f89ff2f1c51b2db0f847eedf 200 SUPERFAMILY SSF46689 3 84 1.9E-17 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_08815 87a01c37f89ff2f1c51b2db0f847eedf 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 2.5E-14 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_08815 87a01c37f89ff2f1c51b2db0f847eedf 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 8.7E-9 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_08815 87a01c37f89ff2f1c51b2db0f847eedf 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 8.7E-9 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_08815 87a01c37f89ff2f1c51b2db0f847eedf 200 Gene3D G3DSA:1.10.357.10 2 198 8.7E-52 T 31-10-2018 DY252_04885 ee6ffd312bbcab813c83cd931e3bab04 309 Gene3D G3DSA:3.40.630.30 24 143 3.9E-6 T 31-10-2018 DY252_04885 ee6ffd312bbcab813c83cd931e3bab04 309 Pfam PF00583 Acetyltransferase (GNAT) family 57 118 1.7E-4 T 31-10-2018 IPR000182 GNAT domain DY252_04885 ee6ffd312bbcab813c83cd931e3bab04 309 SUPERFAMILY SSF55729 30 289 5.68E-28 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_04885 ee6ffd312bbcab813c83cd931e3bab04 309 Gene3D G3DSA:3.40.630.90 182 309 1.1E-10 T 31-10-2018 DY252_11445 778bc7ebcaeda9d94588c71e46485b87 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 270 2.6E-27 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_11445 778bc7ebcaeda9d94588c71e46485b87 287 Gene3D G3DSA:1.10.3720.10 83 276 2.9E-36 T 31-10-2018 IPR035906 MetI-like superfamily DY252_11445 778bc7ebcaeda9d94588c71e46485b87 287 SUPERFAMILY SSF161098 88 270 1.44E-41 T 31-10-2018 IPR035906 MetI-like superfamily DY252_18570 e8643af40de4005447a65f78a496bfa3 216 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 42 195 1.1E-46 T 31-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DY252_18570 e8643af40de4005447a65f78a496bfa3 216 Gene3D G3DSA:3.30.930.10 12 215 6.7E-65 T 31-10-2018 DY252_18570 e8643af40de4005447a65f78a496bfa3 216 PIRSF PIRSF016262 6 216 9.7E-56 T 31-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DY252_18570 e8643af40de4005447a65f78a496bfa3 216 Hamap MF_00013 Octanoyltransferase [lipB]. 10 214 34.353 T 31-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DY252_18570 e8643af40de4005447a65f78a496bfa3 216 Pfam PF03099 Biotin/lipoate A/B protein ligase family 74 171 8.3E-8 T 31-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DY252_18570 e8643af40de4005447a65f78a496bfa3 216 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 83 135 4.0E-14 T 31-10-2018 DY252_18570 e8643af40de4005447a65f78a496bfa3 216 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 78 93 - T 31-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DY252_18570 e8643af40de4005447a65f78a496bfa3 216 SUPERFAMILY SSF55681 15 215 3.73E-68 T 31-10-2018 DY252_20870 36d1f3978e5eb04818b9d7240811ba04 394 SUPERFAMILY SSF103473 6 388 1.05E-34 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_20870 36d1f3978e5eb04818b9d7240811ba04 394 Gene3D G3DSA:1.20.1250.20 3 387 1.8E-30 T 31-10-2018 DY252_20870 36d1f3978e5eb04818b9d7240811ba04 394 Pfam PF07690 Major Facilitator Superfamily 221 386 6.7E-12 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_12810 fcaec6868172a6ce2a892ab307f9aee5 192 Gene3D G3DSA:3.40.50.1240 42 185 2.0E-22 T 31-10-2018 IPR029033 Histidine phosphatase superfamily DY252_12810 fcaec6868172a6ce2a892ab307f9aee5 192 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 65 122 1.2E-6 T 31-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DY252_12810 fcaec6868172a6ce2a892ab307f9aee5 192 SUPERFAMILY SSF53254 43 166 4.94E-16 T 31-10-2018 IPR029033 Histidine phosphatase superfamily DY252_04620 6d4947235bffb92945cb63cedfdcf243 207 Pfam PF04509 CheC-like family 8 43 5.3E-5 T 31-10-2018 IPR007597 CheC-like protein GO:0016787 DY252_04620 6d4947235bffb92945cb63cedfdcf243 207 SUPERFAMILY SSF103039 3 196 7.46E-41 T 31-10-2018 IPR028976 CheC-like superfamily DY252_04620 6d4947235bffb92945cb63cedfdcf243 207 Gene3D G3DSA:3.40.1550.10 1 198 2.8E-50 T 31-10-2018 IPR028976 CheC-like superfamily DY252_18525 ac36694383677a6220644dc82fb3498d 129 SUPERFAMILY SSF51182 33 102 2.38E-5 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_21550 9affc3aecb94035a1bc4eb8149059197 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 53 3.2E-16 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_21550 9affc3aecb94035a1bc4eb8149059197 198 Gene3D G3DSA:1.10.357.10 1 189 7.4E-58 T 31-10-2018 DY252_21550 9affc3aecb94035a1bc4eb8149059197 198 SUPERFAMILY SSF48498 76 182 1.83E-15 T 31-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DY252_21550 9affc3aecb94035a1bc4eb8149059197 198 SUPERFAMILY SSF46689 2 80 8.98E-20 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_21550 9affc3aecb94035a1bc4eb8149059197 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 4.4E-10 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_21550 9affc3aecb94035a1bc4eb8149059197 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 4.4E-10 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_04805 292244f7ce19cf492f9e4628408e6374 811 Pfam PF00563 EAL domain 550 780 1.0E-67 T 31-10-2018 IPR001633 EAL domain DY252_04805 292244f7ce19cf492f9e4628408e6374 811 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 363 531 4.9E-37 T 31-10-2018 IPR000160 GGDEF domain DY252_04805 292244f7ce19cf492f9e4628408e6374 811 SUPERFAMILY SSF141868 549 793 2.88E-85 T 31-10-2018 IPR035919 EAL domain superfamily DY252_04805 292244f7ce19cf492f9e4628408e6374 811 SMART SM00267 354 533 3.4E-51 T 31-10-2018 IPR000160 GGDEF domain DY252_04805 292244f7ce19cf492f9e4628408e6374 811 Pfam PF03707 Bacterial signalling protein N terminal repeat 122 177 1.1E-10 T 31-10-2018 IPR005330 MHYT domain DY252_04805 292244f7ce19cf492f9e4628408e6374 811 Pfam PF03707 Bacterial signalling protein N terminal repeat 58 112 1.5E-11 T 31-10-2018 IPR005330 MHYT domain DY252_04805 292244f7ce19cf492f9e4628408e6374 811 Gene3D G3DSA:3.20.20.450 546 794 1.6E-93 T 31-10-2018 IPR035919 EAL domain superfamily DY252_04805 292244f7ce19cf492f9e4628408e6374 811 SUPERFAMILY SSF55073 370 535 6.28E-42 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_04805 292244f7ce19cf492f9e4628408e6374 811 SMART SM00052 543 787 1.2E-102 T 31-10-2018 IPR001633 EAL domain DY252_04805 292244f7ce19cf492f9e4628408e6374 811 Gene3D G3DSA:3.30.70.270 359 545 6.2E-50 T 31-10-2018 DY252_04805 292244f7ce19cf492f9e4628408e6374 811 Pfam PF00990 Diguanylate cyclase, GGDEF domain 365 528 4.1E-40 T 31-10-2018 IPR000160 GGDEF domain DY252_03845 5b0562591a133d2511cf7c508cc829e2 276 Pfam PF02673 Bacitracin resistance protein BacA 7 257 1.1E-77 T 31-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DY252_03845 5b0562591a133d2511cf7c508cc829e2 276 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 16.231 T 31-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DY252_08445 b9f1a5ecff16bf8f2359ac8c876ffa48 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 70 93 2.0E-60 T 31-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DY252_08445 b9f1a5ecff16bf8f2359ac8c876ffa48 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 133 152 2.0E-60 T 31-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DY252_08445 b9f1a5ecff16bf8f2359ac8c876ffa48 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 2.0E-60 T 31-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DY252_08445 b9f1a5ecff16bf8f2359ac8c876ffa48 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 188 208 2.0E-60 T 31-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DY252_08445 b9f1a5ecff16bf8f2359ac8c876ffa48 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 50 68 2.0E-60 T 31-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DY252_08445 b9f1a5ecff16bf8f2359ac8c876ffa48 346 Pfam PF06723 MreB/Mbl protein 11 338 6.7E-152 T 31-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DY252_08445 b9f1a5ecff16bf8f2359ac8c876ffa48 346 Gene3D G3DSA:3.30.420.40 13 330 4.6E-134 T 31-10-2018 DY252_08445 b9f1a5ecff16bf8f2359ac8c876ffa48 346 Gene3D G3DSA:3.90.640.10 187 262 4.6E-134 T 31-10-2018 DY252_08445 b9f1a5ecff16bf8f2359ac8c876ffa48 346 SUPERFAMILY SSF53067 150 332 6.42E-49 T 31-10-2018 DY252_08445 b9f1a5ecff16bf8f2359ac8c876ffa48 346 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 338 2.5E-157 T 31-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DY252_08445 b9f1a5ecff16bf8f2359ac8c876ffa48 346 Gene3D G3DSA:3.30.420.40 155 320 4.6E-134 T 31-10-2018 DY252_08445 b9f1a5ecff16bf8f2359ac8c876ffa48 346 SUPERFAMILY SSF53067 10 149 1.3E-39 T 31-10-2018 DY252_01945 d2166c7813bd0bf4cc566bf4aec6c43f 287 SUPERFAMILY SSF51215 31 148 1.7E-20 T 31-10-2018 IPR037923 Transcription regulator HTH-like DY252_01945 d2166c7813bd0bf4cc566bf4aec6c43f 287 Pfam PF12833 Helix-turn-helix domain 205 279 7.7E-21 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_01945 d2166c7813bd0bf4cc566bf4aec6c43f 287 Gene3D G3DSA:1.10.10.60 180 284 5.0E-26 T 31-10-2018 DY252_01945 d2166c7813bd0bf4cc566bf4aec6c43f 287 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 275 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_01945 d2166c7813bd0bf4cc566bf4aec6c43f 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 263 5.7E-5 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_01945 d2166c7813bd0bf4cc566bf4aec6c43f 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 263 279 5.7E-5 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_01945 d2166c7813bd0bf4cc566bf4aec6c43f 287 SMART SM00342 200 279 1.3E-20 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_01945 d2166c7813bd0bf4cc566bf4aec6c43f 287 Pfam PF02311 AraC-like ligand binding domain 30 153 1.8E-22 T 31-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DY252_01945 d2166c7813bd0bf4cc566bf4aec6c43f 287 SUPERFAMILY SSF46689 182 231 4.93E-8 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_01945 d2166c7813bd0bf4cc566bf4aec6c43f 287 SUPERFAMILY SSF46689 233 280 3.58E-10 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_15985 0ebb9b8830244b657a8af6e5ac327542 313 Pfam PF03547 Membrane transport protein 165 306 7.1E-12 T 31-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DY252_15985 0ebb9b8830244b657a8af6e5ac327542 313 Pfam PF03547 Membrane transport protein 6 149 3.4E-13 T 31-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DY252_20785 773a3b84376ff8ae29419aa2332d28e6 326 SUPERFAMILY SSF140931 52 250 1.96E-40 T 31-10-2018 IPR036597 Fido-like domain superfamily DY252_20785 773a3b84376ff8ae29419aa2332d28e6 326 Pfam PF02661 Fic/DOC family 69 179 1.3E-20 T 31-10-2018 IPR003812 Fido domain DY252_20785 773a3b84376ff8ae29419aa2332d28e6 326 Gene3D G3DSA:1.10.3290.10 31 243 1.5E-40 T 31-10-2018 IPR036597 Fido-like domain superfamily DY252_13300 986220e8c0ac7f564031b771d69be45d 146 SUPERFAMILY SSF54593 1 129 1.03E-32 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_13300 986220e8c0ac7f564031b771d69be45d 146 Gene3D G3DSA:3.10.180.10 1 132 5.6E-37 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_13300 986220e8c0ac7f564031b771d69be45d 146 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 4.1E-14 T 31-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DY252_19135 8a35a5967f0cacd7347d102c35f47159 151 Gene3D G3DSA:2.40.160.20 1 151 3.2E-60 T 31-10-2018 DY252_19135 8a35a5967f0cacd7347d102c35f47159 151 Hamap MF_00775 UPF0311 protein . 3 151 27.965 T 31-10-2018 IPR020915 Uncharacterised protein family UPF0311 DY252_19135 8a35a5967f0cacd7347d102c35f47159 151 Pfam PF11578 Protein of unknown function (DUF3237) 4 150 3.8E-48 T 31-10-2018 IPR020915 Uncharacterised protein family UPF0311 DY252_17300 b4917853e2b21f07327c2b902a0de2d6 370 Gene3D G3DSA:2.40.50.100 240 353 1.9E-6 T 31-10-2018 DY252_17300 b4917853e2b21f07327c2b902a0de2d6 370 Gene3D G3DSA:3.40.50.300 2 239 9.5E-79 T 31-10-2018 DY252_17300 b4917853e2b21f07327c2b902a0de2d6 370 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_17300 b4917853e2b21f07327c2b902a0de2d6 370 Gene3D G3DSA:2.40.50.140 287 348 1.9E-6 T 31-10-2018 DY252_17300 b4917853e2b21f07327c2b902a0de2d6 370 Pfam PF08402 TOBE domain 280 356 2.2E-7 T 31-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DY252_17300 b4917853e2b21f07327c2b902a0de2d6 370 SUPERFAMILY SSF50331 237 357 2.64E-12 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_17300 b4917853e2b21f07327c2b902a0de2d6 370 SUPERFAMILY SSF52540 5 242 1.03E-84 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_17300 b4917853e2b21f07327c2b902a0de2d6 370 SMART SM00382 29 212 2.9E-17 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_17300 b4917853e2b21f07327c2b902a0de2d6 370 Pfam PF00005 ABC transporter 20 162 2.9E-34 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_18050 792100d62c2e2b04f0a55145e161d46d 762 Pfam PF05226 CHASE2 domain 25 388 1.5E-55 T 31-10-2018 IPR007890 CHASE2 DY252_18050 792100d62c2e2b04f0a55145e161d46d 762 SMART SM01080 37 391 9.8E-75 T 31-10-2018 IPR007890 CHASE2 DY252_18050 792100d62c2e2b04f0a55145e161d46d 762 Gene3D G3DSA:3.30.70.1230 480 692 2.0E-62 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_18050 792100d62c2e2b04f0a55145e161d46d 762 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 488 677 8.0E-32 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_18050 792100d62c2e2b04f0a55145e161d46d 762 SUPERFAMILY SSF55073 485 682 1.88E-56 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_18050 792100d62c2e2b04f0a55145e161d46d 762 SMART SM00044 456 669 1.1E-17 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_03890 3347cc07ec56b6e52d6228e11b54bcd3 119 SUPERFAMILY SSF57716 85 117 9.98E-9 T 31-10-2018 DY252_03890 3347cc07ec56b6e52d6228e11b54bcd3 119 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 85 114 2.2E-11 T 31-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 DY252_03890 3347cc07ec56b6e52d6228e11b54bcd3 119 Gene3D G3DSA:1.20.120.910 2 118 1.2E-22 T 31-10-2018 DY252_19585 b54638f960c7a1072710a86c65f179f6 346 PIRSF PIRSF002849 4 346 2.9E-110 T 31-10-2018 DY252_19585 b54638f960c7a1072710a86c65f179f6 346 SUPERFAMILY SSF52540 27 319 7.42E-43 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_19585 b54638f960c7a1072710a86c65f179f6 346 SMART SM00382 60 204 7.0E-7 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_19585 b54638f960c7a1072710a86c65f179f6 346 Gene3D G3DSA:1.10.8.300 226 342 1.5E-22 T 31-10-2018 DY252_19585 b54638f960c7a1072710a86c65f179f6 346 Gene3D G3DSA:3.40.50.300 44 213 4.7E-43 T 31-10-2018 DY252_19585 b54638f960c7a1072710a86c65f179f6 346 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 63 196 2.4E-57 T 31-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 DY252_12575 5b35f4dd22a21ca919d1b31d901e028d 473 SUPERFAMILY SSF47384 224 303 1.12E-15 T 31-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DY252_12575 5b35f4dd22a21ca919d1b31d901e028d 473 Pfam PF08521 Two-component sensor kinase N-terminal 21 165 1.7E-39 T 31-10-2018 IPR013727 Two-component sensor kinase, N-terminal DY252_12575 5b35f4dd22a21ca919d1b31d901e028d 473 SMART SM00388 241 306 1.2E-12 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_12575 5b35f4dd22a21ca919d1b31d901e028d 473 SMART SM00387 353 466 3.4E-29 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_12575 5b35f4dd22a21ca919d1b31d901e028d 473 SUPERFAMILY SSF55874 308 464 1.7E-30 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_12575 5b35f4dd22a21ca919d1b31d901e028d 473 Gene3D G3DSA:3.30.565.10 316 464 1.3E-30 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_12575 5b35f4dd22a21ca919d1b31d901e028d 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 1.2E-8 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_12575 5b35f4dd22a21ca919d1b31d901e028d 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 1.2E-8 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_12575 5b35f4dd22a21ca919d1b31d901e028d 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 420 1.2E-8 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_12575 5b35f4dd22a21ca919d1b31d901e028d 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 302 1.3E-11 T 31-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DY252_12575 5b35f4dd22a21ca919d1b31d901e028d 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 464 6.6E-19 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_12575 5b35f4dd22a21ca919d1b31d901e028d 473 Gene3D G3DSA:1.10.287.130 193 306 1.7E-18 T 31-10-2018 DY252_07120 afc9d37d5ac24f4a95c54dc639845197 301 Gene3D G3DSA:1.10.3720.10 91 299 8.1E-23 T 31-10-2018 IPR035906 MetI-like superfamily DY252_07120 afc9d37d5ac24f4a95c54dc639845197 301 SUPERFAMILY SSF161098 96 285 1.96E-28 T 31-10-2018 IPR035906 MetI-like superfamily DY252_07120 afc9d37d5ac24f4a95c54dc639845197 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 23 66 5.7E-15 T 31-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DY252_07120 afc9d37d5ac24f4a95c54dc639845197 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 299 5.7E-31 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_17695 7c783e1dc1b931036e93645f08e5679f 262 SUPERFAMILY SSF52540 19 261 7.98E-43 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_17695 7c783e1dc1b931036e93645f08e5679f 262 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 21 238 4.0E-15 T 31-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DY252_17695 7c783e1dc1b931036e93645f08e5679f 262 Gene3D G3DSA:3.40.50.300 19 259 1.8E-46 T 31-10-2018 DY252_17695 7c783e1dc1b931036e93645f08e5679f 262 PIRSF PIRSF003092 5 262 3.1E-65 T 31-10-2018 IPR025501 ATP binding protein MinD DY252_08025 8fa72b560f4d93504b075191a600a92c 720 Gene3D G3DSA:3.50.30.80 539 660 2.8E-24 T 31-10-2018 DY252_08025 8fa72b560f4d93504b075191a600a92c 720 Pfam PF00920 Dehydratase family 82 172 9.6E-14 T 31-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DY252_08025 8fa72b560f4d93504b075191a600a92c 720 Pfam PF00920 Dehydratase family 255 651 3.2E-45 T 31-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DY252_08025 8fa72b560f4d93504b075191a600a92c 720 SUPERFAMILY SSF143975 68 449 7.32E-37 T 31-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DY252_08025 8fa72b560f4d93504b075191a600a92c 720 SUPERFAMILY SSF52016 565 658 8.63E-23 T 31-10-2018 DY252_15445 1557a4895d49b15f73e17344762a3325 429 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 35 81 1.5E-11 T 31-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DY252_15445 1557a4895d49b15f73e17344762a3325 429 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 88 136 4.7E-9 T 31-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain DY252_15445 1557a4895d49b15f73e17344762a3325 429 Pfam PF01610 Transposase 152 386 2.8E-62 T 31-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain DY252_15520 1557a4895d49b15f73e17344762a3325 429 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 35 81 1.5E-11 T 31-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DY252_15520 1557a4895d49b15f73e17344762a3325 429 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 88 136 4.7E-9 T 31-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain DY252_15520 1557a4895d49b15f73e17344762a3325 429 Pfam PF01610 Transposase 152 386 2.8E-62 T 31-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain DY252_16475 2911d23c0b4da6ff69e8618ef69d947b 312 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 224 4.3E-29 T 31-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DY252_16475 2911d23c0b4da6ff69e8618ef69d947b 312 Gene3D G3DSA:3.40.50.720 2 308 4.7E-63 T 31-10-2018 DY252_16475 2911d23c0b4da6ff69e8618ef69d947b 312 SUPERFAMILY SSF51735 1 310 1.43E-68 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_20120 01b959c0b37cdacfa8895f1d87ea03b3 351 TIGRFAM TIGR01230 agmatinase: agmatinase 64 337 1.5E-58 T 31-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 DY252_20120 01b959c0b37cdacfa8895f1d87ea03b3 351 ProSitePatterns PS01053 Arginase family signature. 268 289 - T 31-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 DY252_20120 01b959c0b37cdacfa8895f1d87ea03b3 351 PIRSF PIRSF036979 44 344 1.3E-94 T 31-10-2018 IPR006035 Ureohydrolase GO:0046872 DY252_20120 01b959c0b37cdacfa8895f1d87ea03b3 351 SUPERFAMILY SSF52768 42 341 4.32E-88 T 31-10-2018 IPR023696 Ureohydrolase domain superfamily DY252_20120 01b959c0b37cdacfa8895f1d87ea03b3 351 Pfam PF00491 Arginase family 69 335 1.9E-84 T 31-10-2018 IPR006035 Ureohydrolase GO:0046872 DY252_20120 01b959c0b37cdacfa8895f1d87ea03b3 351 Gene3D G3DSA:3.40.800.10 34 349 1.8E-104 T 31-10-2018 DY252_07705 e006805f029d558f9a5b40f46b184f05 133 Pfam PF01402 Ribbon-helix-helix protein, copG family 6 40 4.2E-6 T 31-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 DY252_16445 6237302ca98a03feb983af81a844febe 157 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 5 90 8.0E-15 T 31-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DY252_16445 6237302ca98a03feb983af81a844febe 157 Gene3D G3DSA:2.30.110.10 4 129 5.3E-22 T 31-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DY252_16445 6237302ca98a03feb983af81a844febe 157 SUPERFAMILY SSF50475 1 99 3.39E-17 T 31-10-2018 DY252_08290 d536a0feca8349162f5bc415bee16b30 207 Pfam PF13649 Methyltransferase domain 43 136 1.0E-20 T 31-10-2018 DY252_08290 d536a0feca8349162f5bc415bee16b30 207 Gene3D G3DSA:3.40.50.150 33 200 1.5E-35 T 31-10-2018 DY252_08290 d536a0feca8349162f5bc415bee16b30 207 SUPERFAMILY SSF53335 7 190 2.92E-35 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_20190 f00a31096179645fafefed940ffbb736 420 Pfam PF13432 Tetratricopeptide repeat 174 216 0.017 T 31-10-2018 DY252_20190 f00a31096179645fafefed940ffbb736 420 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 141 1.7E-20 T 31-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI DY252_20190 f00a31096179645fafefed940ffbb736 420 SUPERFAMILY SSF48452 173 397 6.96E-15 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_20190 f00a31096179645fafefed940ffbb736 420 Gene3D G3DSA:1.25.40.10 352 416 9.0E-6 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_20190 f00a31096179645fafefed940ffbb736 420 Gene3D G3DSA:1.25.40.10 174 298 1.2E-13 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_20190 f00a31096179645fafefed940ffbb736 420 SMART SM00028 190 223 26.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_20190 f00a31096179645fafefed940ffbb736 420 SMART SM00028 368 401 9.9 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_02570 2839470bb87e12b8aa40cdcc6e50288a 253 Gene3D G3DSA:3.90.550.10 9 245 1.8E-46 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_02570 2839470bb87e12b8aa40cdcc6e50288a 253 Pfam PF12804 MobA-like NTP transferase domain 10 143 5.1E-18 T 31-10-2018 IPR025877 MobA-like NTP transferase DY252_02570 2839470bb87e12b8aa40cdcc6e50288a 253 SUPERFAMILY SSF53448 9 236 9.24E-47 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_00845 28c6d322cda75efa946f050b582ed6de 1254 Pfam PF02514 CobN/Magnesium Chelatase 143 1246 0.0 T 31-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 DY252_00845 28c6d322cda75efa946f050b582ed6de 1254 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 1 1251 0.0 T 31-10-2018 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 DY252_14055 1f53b66dbab5ca420383edd004f71105 76 SUPERFAMILY SSF52833 2 75 8.36E-15 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_14055 1f53b66dbab5ca420383edd004f71105 76 PIRSF PIRSF037031 1 76 1.4E-27 T 31-10-2018 IPR005243 Redox-active disulphide protein 2 DY252_14055 1f53b66dbab5ca420383edd004f71105 76 Pfam PF13192 Thioredoxin domain 1 75 2.3E-21 T 31-10-2018 IPR012336 Thioredoxin-like fold DY252_14055 1f53b66dbab5ca420383edd004f71105 76 Gene3D G3DSA:3.40.30.10 1 76 1.5E-22 T 31-10-2018 DY252_14055 1f53b66dbab5ca420383edd004f71105 76 TIGRFAM TIGR00412 redox_disulf_2: redox-active disulfide protein 2 1 75 1.3E-26 T 31-10-2018 IPR005243 Redox-active disulphide protein 2 DY252_10745 5560fbb360c1e10241b8dc57458db15a 322 Gene3D G3DSA:2.30.30.60 123 172 6.9E-16 T 31-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DY252_10745 5560fbb360c1e10241b8dc57458db15a 322 Gene3D G3DSA:3.30.70.100 173 266 6.3E-22 T 31-10-2018 DY252_10745 5560fbb360c1e10241b8dc57458db15a 322 SUPERFAMILY SSF50182 108 173 1.5E-16 T 31-10-2018 IPR010920 LSM domain superfamily DY252_10745 5560fbb360c1e10241b8dc57458db15a 322 Pfam PF00924 Mechanosensitive ion channel 65 261 1.1E-52 T 31-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DY252_10745 5560fbb360c1e10241b8dc57458db15a 322 SUPERFAMILY SSF82861 21 106 1.83E-18 T 31-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DY252_10745 5560fbb360c1e10241b8dc57458db15a 322 SUPERFAMILY SSF82689 174 272 1.83E-28 T 31-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DY252_20140 60eeb5bfba9fe2eeb95f06e65548ae0e 531 Gene3D G3DSA:3.30.70.3280 387 526 1.9E-45 T 31-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily DY252_20140 60eeb5bfba9fe2eeb95f06e65548ae0e 531 Pfam PF00009 Elongation factor Tu GTP binding domain 11 273 5.4E-48 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_20140 60eeb5bfba9fe2eeb95f06e65548ae0e 531 Gene3D G3DSA:3.40.50.300 70 376 1.6E-105 T 31-10-2018 DY252_20140 60eeb5bfba9fe2eeb95f06e65548ae0e 531 PRINTS PR00315 GTP-binding elongation factor signature 13 26 3.3E-11 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_20140 60eeb5bfba9fe2eeb95f06e65548ae0e 531 PRINTS PR00315 GTP-binding elongation factor signature 99 110 3.3E-11 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_20140 60eeb5bfba9fe2eeb95f06e65548ae0e 531 PRINTS PR00315 GTP-binding elongation factor signature 63 71 3.3E-11 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_20140 60eeb5bfba9fe2eeb95f06e65548ae0e 531 PRINTS PR00315 GTP-binding elongation factor signature 135 144 3.3E-11 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_20140 60eeb5bfba9fe2eeb95f06e65548ae0e 531 PRINTS PR00315 GTP-binding elongation factor signature 83 93 3.3E-11 T 31-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DY252_20140 60eeb5bfba9fe2eeb95f06e65548ae0e 531 SUPERFAMILY SSF54980 390 462 3.96E-14 T 31-10-2018 IPR035647 EF-G domain III/V-like DY252_20140 60eeb5bfba9fe2eeb95f06e65548ae0e 531 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 524 50.741 T 31-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 DY252_20140 60eeb5bfba9fe2eeb95f06e65548ae0e 531 Pfam PF16658 Class II release factor RF3, C-terminal domain 384 511 1.1E-42 T 31-10-2018 IPR032090 Peptide chain release factor 3, C-terminal DY252_20140 60eeb5bfba9fe2eeb95f06e65548ae0e 531 SUPERFAMILY SSF50447 258 389 3.53E-25 T 31-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DY252_20140 60eeb5bfba9fe2eeb95f06e65548ae0e 531 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 31-10-2018 IPR031157 Tr-type G domain, conserved site DY252_20140 60eeb5bfba9fe2eeb95f06e65548ae0e 531 Gene3D G3DSA:3.40.50.300 108 272 1.6E-105 T 31-10-2018 DY252_20140 60eeb5bfba9fe2eeb95f06e65548ae0e 531 SUPERFAMILY SSF52540 8 274 1.52E-85 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_20140 60eeb5bfba9fe2eeb95f06e65548ae0e 531 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 146 1.1E-19 T 31-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DY252_20140 60eeb5bfba9fe2eeb95f06e65548ae0e 531 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 2 525 2.4E-209 T 31-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 DY252_14880 3e32ea83a669362056ade3f89acf7216 383 Gene3D G3DSA:3.40.640.10 2 383 1.1E-127 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_14880 3e32ea83a669362056ade3f89acf7216 383 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 230 243 - T 31-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DY252_14880 3e32ea83a669362056ade3f89acf7216 383 SUPERFAMILY SSF53383 10 381 5.85E-97 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_14880 3e32ea83a669362056ade3f89acf7216 383 Pfam PF00155 Aminotransferase class I and II 33 377 6.3E-57 T 31-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DY252_10450 3e0fcebdccc6e64b9e271a49ce47389c 271 SUPERFAMILY SSF161098 8 254 8.32E-43 T 31-10-2018 IPR035906 MetI-like superfamily DY252_10450 3e0fcebdccc6e64b9e271a49ce47389c 271 Gene3D G3DSA:1.10.3720.10 10 260 4.8E-43 T 31-10-2018 IPR035906 MetI-like superfamily DY252_10450 3e0fcebdccc6e64b9e271a49ce47389c 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 257 5.6E-14 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_07205 deea49a7480624415a8a088dd9e0e479 219 SMART SM00895 82 206 5.8E-20 T 31-10-2018 IPR011711 GntR, C-terminal DY252_07205 deea49a7480624415a8a088dd9e0e479 219 Pfam PF07729 FCD domain 83 204 2.7E-24 T 31-10-2018 IPR011711 GntR, C-terminal DY252_07205 deea49a7480624415a8a088dd9e0e479 219 SUPERFAMILY SSF48008 80 214 5.75E-29 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_07205 deea49a7480624415a8a088dd9e0e479 219 SMART SM00345 14 72 1.5E-10 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_07205 deea49a7480624415a8a088dd9e0e479 219 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 72 1.0E-12 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_07205 deea49a7480624415a8a088dd9e0e479 219 Gene3D G3DSA:1.10.10.10 6 73 2.4E-18 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_07205 deea49a7480624415a8a088dd9e0e479 219 SUPERFAMILY SSF46785 3 86 1.36E-16 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_07205 deea49a7480624415a8a088dd9e0e479 219 Gene3D G3DSA:1.20.120.530 77 218 1.3E-31 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_13410 6c3cbfd8dd335438a6fce39370aff36a 134 SUPERFAMILY SSF54593 1 133 2.42E-37 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_13410 6c3cbfd8dd335438a6fce39370aff36a 134 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 118 1.9E-22 T 31-10-2018 DY252_13410 6c3cbfd8dd335438a6fce39370aff36a 134 Gene3D G3DSA:3.10.180.10 1 134 4.4E-41 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_13410 6c3cbfd8dd335438a6fce39370aff36a 134 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 4 133 3.4E-51 T 31-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 DY252_01195 01c2e2210d2c91b26f5fe7b82e500bac 181 PRINTS PR01837 MgtC/SapB protein signature 54 72 6.9E-31 T 31-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DY252_01195 01c2e2210d2c91b26f5fe7b82e500bac 181 PRINTS PR01837 MgtC/SapB protein signature 117 141 6.9E-31 T 31-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DY252_01195 01c2e2210d2c91b26f5fe7b82e500bac 181 PRINTS PR01837 MgtC/SapB protein signature 35 54 6.9E-31 T 31-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DY252_01195 01c2e2210d2c91b26f5fe7b82e500bac 181 PRINTS PR01837 MgtC/SapB protein signature 88 110 6.9E-31 T 31-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DY252_01195 01c2e2210d2c91b26f5fe7b82e500bac 181 Pfam PF02308 MgtC family 32 162 1.2E-33 T 31-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DY252_09050 87243e36f20161ecc7d1f87063ed511a 117 SUPERFAMILY SSF53137 7 115 1.05E-49 T 31-10-2018 DY252_09050 87243e36f20161ecc7d1f87063ed511a 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 8 117 3.1E-44 T 31-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_09050 87243e36f20161ecc7d1f87063ed511a 117 Gene3D G3DSA:3.30.420.100 3 117 1.7E-43 T 31-10-2018 DY252_09050 87243e36f20161ecc7d1f87063ed511a 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 117 29.035 T 31-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_09050 87243e36f20161ecc7d1f87063ed511a 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 9 117 3.4E-43 T 31-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_08945 2613178d2d66b13d04cc0395d32930b9 123 Pfam PF00164 Ribosomal protein S12/S23 15 123 1.6E-43 T 31-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_08945 2613178d2d66b13d04cc0395d32930b9 123 Gene3D G3DSA:2.40.50.140 1 123 2.8E-64 T 31-10-2018 DY252_08945 2613178d2d66b13d04cc0395d32930b9 123 SUPERFAMILY SSF50249 2 123 7.97E-53 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_08945 2613178d2d66b13d04cc0395d32930b9 123 PIRSF PIRSF002133 1 123 3.7E-55 T 31-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_08945 2613178d2d66b13d04cc0395d32930b9 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.1E-62 T 31-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_08945 2613178d2d66b13d04cc0395d32930b9 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.1E-62 T 31-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_08945 2613178d2d66b13d04cc0395d32930b9 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.1E-62 T 31-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_08945 2613178d2d66b13d04cc0395d32930b9 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.1E-62 T 31-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_08945 2613178d2d66b13d04cc0395d32930b9 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.1E-62 T 31-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_08945 2613178d2d66b13d04cc0395d32930b9 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.1E-62 T 31-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_08945 2613178d2d66b13d04cc0395d32930b9 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 31-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_08945 2613178d2d66b13d04cc0395d32930b9 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.694 T 31-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_08945 2613178d2d66b13d04cc0395d32930b9 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 3.7E-69 T 31-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_00740 b02c9e1506a44ed23ecf1f901bf45ea8 88 Pfam PF06620 Protein of unknown function (DUF1150) 24 88 1.2E-6 T 31-10-2018 IPR009531 Protein of unknown function DUF1150 DY252_09130 60709c97ea6f41bd03414c5ab4ef8ee5 367 Gene3D G3DSA:3.10.290.10 6 67 7.3E-14 T 31-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DY252_09130 60709c97ea6f41bd03414c5ab4ef8ee5 367 SUPERFAMILY SSF55174 15 65 4.06E-9 T 31-10-2018 DY252_09130 60709c97ea6f41bd03414c5ab4ef8ee5 367 Pfam PF00849 RNA pseudouridylate synthase 122 272 7.3E-37 T 31-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_09130 60709c97ea6f41bd03414c5ab4ef8ee5 367 Pfam PF01479 S4 domain 32 62 3.7E-6 T 31-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09130 60709c97ea6f41bd03414c5ab4ef8ee5 367 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 102 332 1.5E-61 T 31-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_09130 60709c97ea6f41bd03414c5ab4ef8ee5 367 SMART SM00363 16 75 0.0062 T 31-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09130 60709c97ea6f41bd03414c5ab4ef8ee5 367 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 161 175 - T 31-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_09130 60709c97ea6f41bd03414c5ab4ef8ee5 367 SUPERFAMILY SSF55120 110 336 2.08E-61 T 31-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_09130 60709c97ea6f41bd03414c5ab4ef8ee5 367 Gene3D G3DSA:3.30.2350.10 112 335 1.1E-65 T 31-10-2018 DY252_16090 3817be2f0900b5b3232de06a751a41cf 70 Gene3D G3DSA:3.30.429.10 2 61 5.3E-11 T 31-10-2018 IPR014347 Tautomerase/MIF superfamily DY252_16090 3817be2f0900b5b3232de06a751a41cf 70 SUPERFAMILY SSF55331 2 63 7.85E-10 T 31-10-2018 IPR014347 Tautomerase/MIF superfamily DY252_16090 3817be2f0900b5b3232de06a751a41cf 70 Pfam PF01361 Tautomerase enzyme 2 60 1.6E-15 T 31-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 DY252_10095 41609a150d2e51eb1549922cd84b5700 456 Gene3D G3DSA:2.120.10.30 184 455 1.4E-75 T 31-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DY252_10095 41609a150d2e51eb1549922cd84b5700 456 SUPERFAMILY SSF69304 179 453 7.85E-56 T 31-10-2018 DY252_10095 41609a150d2e51eb1549922cd84b5700 456 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 22 451 49.434 T 31-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 DY252_10095 41609a150d2e51eb1549922cd84b5700 456 Gene3D G3DSA:3.40.50.10070 37 183 4.0E-42 T 31-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 DY252_10095 41609a150d2e51eb1549922cd84b5700 456 SUPERFAMILY SSF52964 46 180 1.7E-39 T 31-10-2018 DY252_10095 41609a150d2e51eb1549922cd84b5700 456 Pfam PF04052 TolB amino-terminal domain 41 148 2.3E-34 T 31-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 DY252_10095 41609a150d2e51eb1549922cd84b5700 456 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 33 452 1.1E-140 T 31-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 DY252_10095 41609a150d2e51eb1549922cd84b5700 456 Pfam PF07676 WD40-like Beta Propeller Repeat 345 378 0.0019 T 31-10-2018 IPR011659 WD40-like Beta Propeller DY252_10095 41609a150d2e51eb1549922cd84b5700 456 Pfam PF07676 WD40-like Beta Propeller Repeat 261 292 0.064 T 31-10-2018 IPR011659 WD40-like Beta Propeller DY252_10095 41609a150d2e51eb1549922cd84b5700 456 Pfam PF07676 WD40-like Beta Propeller Repeat 301 336 1.8E-10 T 31-10-2018 IPR011659 WD40-like Beta Propeller DY252_12140 2c9a7403d570bdc2dc0808e8701acd21 289 Pfam PF02616 Segregation and condensation protein ScpA 46 132 1.0E-13 T 31-10-2018 IPR003768 Segregation and condensation protein A DY252_10900 cbd2a27e8fd0d8213898e80cd6c2baf4 413 Gene3D G3DSA:3.90.1150.10 296 394 1.5E-118 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_10900 cbd2a27e8fd0d8213898e80cd6c2baf4 413 Gene3D G3DSA:3.40.640.10 65 295 1.5E-118 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_10900 cbd2a27e8fd0d8213898e80cd6c2baf4 413 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 31-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DY252_10900 cbd2a27e8fd0d8213898e80cd6c2baf4 413 SUPERFAMILY SSF53383 1 397 4.08E-107 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_10900 cbd2a27e8fd0d8213898e80cd6c2baf4 413 Pfam PF00155 Aminotransferase class I and II 32 378 9.1E-57 T 31-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DY252_15625 d58846abed29c86f2d6030e2ff9d31df 362 Pfam PF12706 Beta-lactamase superfamily domain 26 138 1.8E-9 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_15625 d58846abed29c86f2d6030e2ff9d31df 362 SUPERFAMILY SSF56281 4 302 2.75E-42 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_15625 d58846abed29c86f2d6030e2ff9d31df 362 SMART SM00849 15 178 1.2E-10 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_15625 d58846abed29c86f2d6030e2ff9d31df 362 Gene3D G3DSA:3.60.15.10 4 210 2.0E-31 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_03875 ca19097fa79088a643ce5bfb079cb84b 634 Gene3D G3DSA:3.10.105.10 354 592 3.6E-35 T 31-10-2018 DY252_03875 ca19097fa79088a643ce5bfb079cb84b 634 SUPERFAMILY SSF53850 76 609 9.41E-72 T 31-10-2018 DY252_03875 ca19097fa79088a643ce5bfb079cb84b 634 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 102 507 6.7E-59 T 31-10-2018 IPR000914 Solute-binding protein family 5 domain DY252_09565 51db0c518db3de97a2981164c009e06e 322 Pfam PF12697 Alpha/beta hydrolase family 60 274 1.6E-6 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_09565 51db0c518db3de97a2981164c009e06e 322 SUPERFAMILY SSF53474 21 288 2.49E-33 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_09565 51db0c518db3de97a2981164c009e06e 322 PIRSF PIRSF031982 13 318 1.3E-77 T 31-10-2018 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL DY252_02160 43136f5ff822c249691e5c29d4048d32 361 SMART SM00382 31 346 1.3E-9 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_02160 43136f5ff822c249691e5c29d4048d32 361 Gene3D G3DSA:3.40.50.300 2 240 9.1E-75 T 31-10-2018 DY252_02160 43136f5ff822c249691e5c29d4048d32 361 Pfam PF00005 ABC transporter 23 164 2.6E-31 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_02160 43136f5ff822c249691e5c29d4048d32 361 Pfam PF08402 TOBE domain 282 360 8.7E-5 T 31-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DY252_02160 43136f5ff822c249691e5c29d4048d32 361 SUPERFAMILY SSF52540 7 245 1.6E-83 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_02160 43136f5ff822c249691e5c29d4048d32 361 SUPERFAMILY SSF50331 240 360 3.57E-9 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_02160 43136f5ff822c249691e5c29d4048d32 361 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_19525 8ffaae154e621508ddb6224ac04bd0c1 424 SUPERFAMILY SSF56176 338 422 1.96E-21 T 31-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DY252_19525 8ffaae154e621508ddb6224ac04bd0c1 424 Pfam PF03471 Transporter associated domain 340 414 3.4E-19 T 31-10-2018 IPR005170 Transporter-associated domain DY252_19525 8ffaae154e621508ddb6224ac04bd0c1 424 Pfam PF01595 Domain of unknown function DUF21 7 176 1.4E-44 T 31-10-2018 IPR002550 CNNM, transmembrane domain DY252_19525 8ffaae154e621508ddb6224ac04bd0c1 424 SMART SM01091 338 416 1.7E-27 T 31-10-2018 IPR005170 Transporter-associated domain DY252_19525 8ffaae154e621508ddb6224ac04bd0c1 424 SUPERFAMILY SSF54631 196 335 4.25E-30 T 31-10-2018 DY252_19525 8ffaae154e621508ddb6224ac04bd0c1 424 Pfam PF00571 CBS domain 270 323 4.9E-7 T 31-10-2018 IPR000644 CBS domain DY252_19525 8ffaae154e621508ddb6224ac04bd0c1 424 Pfam PF00571 CBS domain 207 258 6.9E-4 T 31-10-2018 IPR000644 CBS domain DY252_19525 8ffaae154e621508ddb6224ac04bd0c1 424 Gene3D G3DSA:3.10.580.10 182 337 2.3E-49 T 31-10-2018 DY252_19525 8ffaae154e621508ddb6224ac04bd0c1 424 Gene3D G3DSA:3.30.465.10 338 414 1.8E-25 T 31-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DY252_02205 f1931c0d6c5dc3fcec9900639702d19f 507 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 441 1.1E-129 T 31-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane DY252_06980 1a84b85d5e0eafa3454d7bc0b82da262 302 SUPERFAMILY SSF110581 2 300 5.1E-116 T 31-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 DY252_06980 1a84b85d5e0eafa3454d7bc0b82da262 302 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 9 302 44.248 T 31-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 DY252_06980 1a84b85d5e0eafa3454d7bc0b82da262 302 Pfam PF04227 Indigoidine synthase A like protein 10 298 1.5E-131 T 31-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 DY252_06980 1a84b85d5e0eafa3454d7bc0b82da262 302 Gene3D G3DSA:3.40.1790.10 1 302 2.7E-134 T 31-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 DY252_14190 ca34da6210ae84e1330508bdffcd453e 353 Pfam PF02653 Branched-chain amino acid transport system / permease component 63 327 7.0E-40 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_19110 6be0226cdbd678c8df6c98279ade26e6 267 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 5 260 1.0E-111 T 31-10-2018 IPR010247 N-formylglutamate deformylase DY252_19110 6be0226cdbd678c8df6c98279ade26e6 267 SUPERFAMILY SSF53187 5 260 2.2E-82 T 31-10-2018 DY252_19110 6be0226cdbd678c8df6c98279ade26e6 267 Pfam PF05013 N-formylglutamate amidohydrolase 13 228 7.1E-65 T 31-10-2018 IPR007709 N-formylglutamate amidohydrolase DY252_19110 6be0226cdbd678c8df6c98279ade26e6 267 Gene3D G3DSA:3.40.630.40 2 262 2.2E-68 T 31-10-2018 DY252_15480 8deaa2332d164400bd4f13b528c89534 167 Gene3D G3DSA:2.60.40.790 19 166 1.4E-39 T 31-10-2018 IPR008978 HSP20-like chaperone DY252_15480 8deaa2332d164400bd4f13b528c89534 167 SUPERFAMILY SSF49764 56 166 1.42E-37 T 31-10-2018 IPR008978 HSP20-like chaperone DY252_15480 8deaa2332d164400bd4f13b528c89534 167 Pfam PF00011 Hsp20/alpha crystallin family 65 165 2.5E-26 T 31-10-2018 IPR002068 Alpha crystallin/Hsp20 domain DY252_03690 1f4d84b97d5cebf4e97d2d5737d8eb29 299 Gene3D G3DSA:1.10.800.10 3 284 1.4E-96 T 31-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 DY252_03690 1f4d84b97d5cebf4e97d2d5737d8eb29 299 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 17 264 3.4E-101 T 31-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 DY252_03690 1f4d84b97d5cebf4e97d2d5737d8eb29 299 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 124 135 - T 31-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 DY252_03690 1f4d84b97d5cebf4e97d2d5737d8eb29 299 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 26 243 2.4E-44 T 31-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 DY252_03690 1f4d84b97d5cebf4e97d2d5737d8eb29 299 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 81 103 2.3E-10 T 31-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 DY252_03690 1f4d84b97d5cebf4e97d2d5737d8eb29 299 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 186 204 2.3E-10 T 31-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 DY252_03690 1f4d84b97d5cebf4e97d2d5737d8eb29 299 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 218 237 2.3E-10 T 31-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 DY252_03690 1f4d84b97d5cebf4e97d2d5737d8eb29 299 SUPERFAMILY SSF56534 14 259 1.07E-89 T 31-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily DY252_20715 7849949c10188644fea9a01656eb8429 325 Pfam PF12706 Beta-lactamase superfamily domain 57 267 4.7E-12 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_20715 7849949c10188644fea9a01656eb8429 325 SUPERFAMILY SSF56281 46 282 9.3E-21 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_20715 7849949c10188644fea9a01656eb8429 325 Gene3D G3DSA:3.60.15.10 46 316 1.2E-27 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_11735 8a7c36678668b85727fac27123840d9d 441 Pfam PF04403 Paraquat-inducible protein A 44 197 3.1E-43 T 31-10-2018 IPR007498 Intermembrane transport protein PqiA-like DY252_11735 8a7c36678668b85727fac27123840d9d 441 Pfam PF04403 Paraquat-inducible protein A 258 413 1.6E-56 T 31-10-2018 IPR007498 Intermembrane transport protein PqiA-like DY252_11735 8a7c36678668b85727fac27123840d9d 441 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 5 413 1.4E-86 T 31-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type DY252_15780 5f387a653f5394f455ee33ddd6e25cd1 334 Pfam PF03601 Conserved hypothetical protein 698 12 314 3.3E-69 T 31-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 DY252_18020 9dfefbc11057a79c9d8c7d892752844d 186 Gene3D G3DSA:3.40.50.720 1 107 2.3E-10 T 31-10-2018 DY252_18020 9dfefbc11057a79c9d8c7d892752844d 186 Pfam PF13241 Putative NAD(P)-binding 4 111 2.5E-9 T 31-10-2018 DY252_18020 9dfefbc11057a79c9d8c7d892752844d 186 Pfam PF14824 Sirohaem biosynthesis protein central 115 141 9.1E-9 T 31-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DY252_18020 9dfefbc11057a79c9d8c7d892752844d 186 SUPERFAMILY SSF75615 104 166 1.83E-14 T 31-10-2018 DY252_18020 9dfefbc11057a79c9d8c7d892752844d 186 Gene3D G3DSA:3.30.160.110 110 143 2.0E-8 T 31-10-2018 DY252_09175 c1876b1fd48a269d9dbe0a846bd4f687 240 Gene3D G3DSA:3.30.2180.30 2 70 1.7E-22 T 31-10-2018 DY252_09175 c1876b1fd48a269d9dbe0a846bd4f687 240 SUPERFAMILY SSF160909 4 236 7.06E-74 T 31-10-2018 DY252_09175 c1876b1fd48a269d9dbe0a846bd4f687 240 Pfam PF07542 ATP12 chaperone protein 10 129 9.0E-35 T 31-10-2018 IPR011419 ATP12, ATP synthase F1-assembly protein GO:0043461 DY252_09175 c1876b1fd48a269d9dbe0a846bd4f687 240 Gene3D G3DSA:1.10.3580.10 71 240 2.4E-56 T 31-10-2018 IPR023335 ATP12 orthogonal Bundle domain superfamily DY252_16495 d942fae09680c07540ab6dc6aa1cb8c2 299 Gene3D G3DSA:3.40.190.10 106 294 3.4E-35 T 31-10-2018 DY252_16495 d942fae09680c07540ab6dc6aa1cb8c2 299 SUPERFAMILY SSF53850 96 298 9.05E-24 T 31-10-2018 DY252_16495 d942fae09680c07540ab6dc6aa1cb8c2 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 70 1.3E-20 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_16495 d942fae09680c07540ab6dc6aa1cb8c2 299 Gene3D G3DSA:1.10.10.10 13 99 2.8E-21 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_16495 d942fae09680c07540ab6dc6aa1cb8c2 299 Pfam PF03466 LysR substrate binding domain 96 298 6.6E-21 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_16495 d942fae09680c07540ab6dc6aa1cb8c2 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.0E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_16495 d942fae09680c07540ab6dc6aa1cb8c2 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.0E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_16495 d942fae09680c07540ab6dc6aa1cb8c2 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.0E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_16495 d942fae09680c07540ab6dc6aa1cb8c2 299 SUPERFAMILY SSF46785 15 117 4.57E-21 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_16495 d942fae09680c07540ab6dc6aa1cb8c2 299 Gene3D G3DSA:3.40.190.10 164 267 3.4E-35 T 31-10-2018 DY252_06155 c2ea643ca07e4fe2ba2678bb7c609765 902 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 4 53 1.3E-16 T 31-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_06155 c2ea643ca07e4fe2ba2678bb7c609765 902 Pfam PF01568 Molydopterin dinucleotide binding domain 600 709 2.8E-28 T 31-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DY252_06155 c2ea643ca07e4fe2ba2678bb7c609765 902 SUPERFAMILY SSF50692 589 738 4.07E-42 T 31-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DY252_06155 c2ea643ca07e4fe2ba2678bb7c609765 902 PIRSF PIRSF036643 1 729 3.0E-129 T 31-10-2018 DY252_06155 c2ea643ca07e4fe2ba2678bb7c609765 902 Pfam PF00384 Molybdopterin oxidoreductase 71 497 7.5E-72 T 31-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_06155 c2ea643ca07e4fe2ba2678bb7c609765 902 SUPERFAMILY SSF53706 4 599 1.57E-168 T 31-10-2018 DY252_06155 c2ea643ca07e4fe2ba2678bb7c609765 902 SMART SM00926 2 55 1.3E-17 T 31-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_06155 c2ea643ca07e4fe2ba2678bb7c609765 902 Pfam PF04324 BFD-like [2Fe-2S] binding domain 845 894 2.4E-13 T 31-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DY252_06155 c2ea643ca07e4fe2ba2678bb7c609765 902 Gene3D G3DSA:2.40.40.20 586 721 3.3E-35 T 31-10-2018 DY252_06155 c2ea643ca07e4fe2ba2678bb7c609765 902 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 7 25 - T 31-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 DY252_06155 c2ea643ca07e4fe2ba2678bb7c609765 902 Gene3D G3DSA:3.40.228.10 139 581 2.9E-162 T 31-10-2018 DY252_06155 c2ea643ca07e4fe2ba2678bb7c609765 902 Gene3D G3DSA:2.20.25.90 1 57 1.1E-14 T 31-10-2018 DY252_06155 c2ea643ca07e4fe2ba2678bb7c609765 902 Gene3D G3DSA:1.10.10.1100 845 899 8.7E-8 T 31-10-2018 DY252_06155 c2ea643ca07e4fe2ba2678bb7c609765 902 Gene3D G3DSA:3.40.50.740 73 579 2.9E-162 T 31-10-2018 DY252_18150 b2ee607112c2455db44a90178aeab1e5 266 PIRSF PIRSF015601 8 258 3.0E-55 T 31-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DY252_18150 b2ee607112c2455db44a90178aeab1e5 266 SUPERFAMILY SSF75217 86 258 3.3E-43 T 31-10-2018 IPR029028 Alpha/beta knot methyltransferases DY252_18150 b2ee607112c2455db44a90178aeab1e5 266 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 19 257 5.8E-36 T 31-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DY252_18150 b2ee607112c2455db44a90178aeab1e5 266 Gene3D G3DSA:2.40.240.20 10 78 4.7E-25 T 31-10-2018 DY252_18150 b2ee607112c2455db44a90178aeab1e5 266 Gene3D G3DSA:3.40.1280.10 81 259 2.4E-51 T 31-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DY252_18150 b2ee607112c2455db44a90178aeab1e5 266 SUPERFAMILY SSF88697 10 76 1.64E-12 T 31-10-2018 IPR015947 PUA-like superfamily DY252_18150 b2ee607112c2455db44a90178aeab1e5 266 Pfam PF04452 RNA methyltransferase 26 252 3.6E-56 T 31-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DY252_20905 117c31b07272d4ff3788eac26ed55acd 69 Pfam PF00403 Heavy-metal-associated domain 4 60 4.5E-13 T 31-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DY252_20905 117c31b07272d4ff3788eac26ed55acd 69 SUPERFAMILY SSF55008 2 63 1.57E-14 T 31-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DY252_20905 117c31b07272d4ff3788eac26ed55acd 69 Gene3D G3DSA:3.30.70.100 3 63 2.4E-18 T 31-10-2018 DY252_08255 38cc244673455a591fa8911cace6dfd3 669 Gene3D G3DSA:1.20.210.10 40 574 3.2E-188 T 31-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08255 38cc244673455a591fa8911cace6dfd3 669 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 12 657 0.0 T 31-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 DY252_08255 38cc244673455a591fa8911cace6dfd3 669 PRINTS PR01165 Cytochrome c oxidase subunit I signature 471 492 2.8E-94 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08255 38cc244673455a591fa8911cace6dfd3 669 PRINTS PR01165 Cytochrome c oxidase subunit I signature 57 82 2.8E-94 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08255 38cc244673455a591fa8911cace6dfd3 669 PRINTS PR01165 Cytochrome c oxidase subunit I signature 107 130 2.8E-94 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08255 38cc244673455a591fa8911cace6dfd3 669 PRINTS PR01165 Cytochrome c oxidase subunit I signature 208 226 2.8E-94 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08255 38cc244673455a591fa8911cace6dfd3 669 PRINTS PR01165 Cytochrome c oxidase subunit I signature 393 411 2.8E-94 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08255 38cc244673455a591fa8911cace6dfd3 669 PRINTS PR01165 Cytochrome c oxidase subunit I signature 237 256 2.8E-94 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08255 38cc244673455a591fa8911cace6dfd3 669 PRINTS PR01165 Cytochrome c oxidase subunit I signature 288 309 2.8E-94 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08255 38cc244673455a591fa8911cace6dfd3 669 PRINTS PR01165 Cytochrome c oxidase subunit I signature 334 349 2.8E-94 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08255 38cc244673455a591fa8911cace6dfd3 669 PRINTS PR01165 Cytochrome c oxidase subunit I signature 421 440 2.8E-94 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08255 38cc244673455a591fa8911cace6dfd3 669 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 379 2.8E-94 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08255 38cc244673455a591fa8911cace6dfd3 669 PRINTS PR01165 Cytochrome c oxidase subunit I signature 134 158 2.8E-94 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08255 38cc244673455a591fa8911cace6dfd3 669 PRINTS PR01165 Cytochrome c oxidase subunit I signature 176 188 2.8E-94 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08255 38cc244673455a591fa8911cace6dfd3 669 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 290 344 - T 31-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08255 38cc244673455a591fa8911cace6dfd3 669 SUPERFAMILY SSF81442 53 570 4.58E-176 T 31-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08255 38cc244673455a591fa8911cace6dfd3 669 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 66 513 7.5E-138 T 31-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_06620 8ec24d0b191097819c1a04ec03d2dfc2 318 SMART SM00267 146 316 7.9E-33 T 31-10-2018 IPR000160 GGDEF domain DY252_06620 8ec24d0b191097819c1a04ec03d2dfc2 318 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 155 317 5.9E-39 T 31-10-2018 IPR000160 GGDEF domain DY252_06620 8ec24d0b191097819c1a04ec03d2dfc2 318 Pfam PF13185 GAF domain 9 136 7.3E-9 T 31-10-2018 IPR003018 GAF domain GO:0005515 DY252_06620 8ec24d0b191097819c1a04ec03d2dfc2 318 SUPERFAMILY SSF55073 162 317 8.63E-34 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_06620 8ec24d0b191097819c1a04ec03d2dfc2 318 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 317 1.9E-34 T 31-10-2018 IPR000160 GGDEF domain DY252_06620 8ec24d0b191097819c1a04ec03d2dfc2 318 SUPERFAMILY SSF55781 8 155 1.47E-19 T 31-10-2018 DY252_06620 8ec24d0b191097819c1a04ec03d2dfc2 318 Gene3D G3DSA:3.30.450.40 6 153 4.9E-15 T 31-10-2018 IPR029016 GAF-like domain superfamily DY252_06620 8ec24d0b191097819c1a04ec03d2dfc2 318 SMART SM00065 3 154 3.3E-9 T 31-10-2018 IPR003018 GAF domain GO:0005515 DY252_06620 8ec24d0b191097819c1a04ec03d2dfc2 318 Gene3D G3DSA:3.30.70.270 154 318 7.8E-40 T 31-10-2018 DY252_11240 1114bd0cc4f5c7e043e129ddc5cdcce7 332 SUPERFAMILY SSF53686 2 326 2.75E-91 T 31-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DY252_11240 1114bd0cc4f5c7e043e129ddc5cdcce7 332 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 306 2.0E-65 T 31-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DY252_11240 1114bd0cc4f5c7e043e129ddc5cdcce7 332 Gene3D G3DSA:3.40.50.1100 9 312 8.4E-115 T 31-10-2018 DY252_11240 1114bd0cc4f5c7e043e129ddc5cdcce7 332 Gene3D G3DSA:3.40.50.1100 38 151 8.4E-115 T 31-10-2018 DY252_11240 1114bd0cc4f5c7e043e129ddc5cdcce7 332 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 31-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 DY252_06075 1cd27bca2fa40646281bbd412fbf0906 286 Gene3D G3DSA:3.10.620.30 95 273 1.0E-31 T 31-10-2018 DY252_06075 1cd27bca2fa40646281bbd412fbf0906 286 SUPERFAMILY SSF54001 8 268 2.16E-37 T 31-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DY252_06075 1cd27bca2fa40646281bbd412fbf0906 286 Pfam PF01841 Transglutaminase-like superfamily 146 240 7.2E-22 T 31-10-2018 IPR002931 Transglutaminase-like DY252_06075 1cd27bca2fa40646281bbd412fbf0906 286 SMART SM00460 173 242 4.8E-22 T 31-10-2018 IPR002931 Transglutaminase-like DY252_06075 1cd27bca2fa40646281bbd412fbf0906 286 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 6 82 1.8E-18 T 31-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal DY252_10640 cdf6dc324ec14ee5cb5589da03a603af 253 Pfam PF12697 Alpha/beta hydrolase family 61 244 3.7E-11 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_10640 cdf6dc324ec14ee5cb5589da03a603af 253 SUPERFAMILY SSF53474 11 251 6.22E-39 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_10640 cdf6dc324ec14ee5cb5589da03a603af 253 Gene3D G3DSA:3.40.50.1820 9 253 3.1E-37 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_14860 c467639f8e4adcb0ee1341b0456a115e 523 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 34 1.7E-5 T 31-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DY252_14860 c467639f8e4adcb0ee1341b0456a115e 523 Pfam PF09423 PhoD-like phosphatase 149 504 4.2E-81 T 31-10-2018 IPR018946 Alkaline phosphatase D-related DY252_14860 c467639f8e4adcb0ee1341b0456a115e 523 Gene3D G3DSA:2.60.40.380 34 136 9.4E-7 T 31-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 DY252_14860 c467639f8e4adcb0ee1341b0456a115e 523 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 42 133 7.4E-16 T 31-10-2018 IPR032093 Phospholipase D, N-terminal DY252_14860 c467639f8e4adcb0ee1341b0456a115e 523 Gene3D G3DSA:3.60.21.70 157 483 2.7E-65 T 31-10-2018 IPR038607 PhoD-like superfamily DY252_14860 c467639f8e4adcb0ee1341b0456a115e 523 SUPERFAMILY SSF56300 140 518 5.96E-37 T 31-10-2018 DY252_12660 19da3daae73a2620dde2168d1825ffd3 108 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 12 105 5.7E-33 T 31-10-2018 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ DY252_12660 19da3daae73a2620dde2168d1825ffd3 108 Gene3D G3DSA:2.60.40.10 1 108 5.8E-45 T 31-10-2018 IPR013783 Immunoglobulin-like fold DY252_12660 19da3daae73a2620dde2168d1825ffd3 108 SUPERFAMILY SSF81296 5 105 1.82E-34 T 31-10-2018 IPR014756 Immunoglobulin E-set DY252_12660 19da3daae73a2620dde2168d1825ffd3 108 Pfam PF08770 Sulphur oxidation protein SoxZ 13 102 1.9E-31 T 31-10-2018 IPR014880 Sulphur oxidation protein SoxZ DY252_00380 1606dab0aa803164c3809043193f0774 201 Pfam PF08534 Redoxin 50 173 7.6E-14 T 31-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DY252_00380 1606dab0aa803164c3809043193f0774 201 ProSitePatterns PS00194 Thioredoxin family active site. 79 97 - T 31-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DY252_00380 1606dab0aa803164c3809043193f0774 201 SUPERFAMILY SSF52833 54 186 5.25E-33 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_00380 1606dab0aa803164c3809043193f0774 201 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 23 186 3.0E-53 T 31-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 DY252_00380 1606dab0aa803164c3809043193f0774 201 Gene3D G3DSA:3.40.30.10 32 193 2.2E-37 T 31-10-2018 DY252_09960 1214c91fb226133fd83e660ffc03d5d9 396 Pfam PF03594 Benzoate membrane transport protein 4 385 5.1E-110 T 31-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 DY252_09960 1214c91fb226133fd83e660ffc03d5d9 396 TIGRFAM TIGR00843 benE: benzoate transporter 4 385 3.7E-84 T 31-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 DY252_11035 1b22a82de20185c26bce584bf343f37f 392 PIRSF PIRSF001434 5 392 2.8E-121 T 31-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DY252_11035 1b22a82de20185c26bce584bf343f37f 392 SUPERFAMILY SSF53383 44 389 6.19E-98 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_11035 1b22a82de20185c26bce584bf343f37f 392 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 204 218 - T 31-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DY252_11035 1b22a82de20185c26bce584bf343f37f 392 Gene3D G3DSA:3.40.640.10 15 263 2.9E-75 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_11035 1b22a82de20185c26bce584bf343f37f 392 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 21 388 2.6E-112 T 31-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DY252_11035 1b22a82de20185c26bce584bf343f37f 392 Gene3D G3DSA:3.90.1150.10 265 392 2.5E-42 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_04195 0cb21ea211768e43fdaa2088fc461a36 445 Gene3D G3DSA:2.40.30.10 219 316 1.6E-11 T 31-10-2018 DY252_04195 0cb21ea211768e43fdaa2088fc461a36 445 Pfam PF08022 FAD-binding domain 239 317 5.3E-6 T 31-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 DY252_04195 0cb21ea211768e43fdaa2088fc461a36 445 Pfam PF01794 Ferric reductase like transmembrane component 44 179 4.9E-17 T 31-10-2018 IPR013130 Ferric reductase transmembrane component-like domain DY252_04195 0cb21ea211768e43fdaa2088fc461a36 445 SUPERFAMILY SSF52343 307 440 7.86E-20 T 31-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DY252_04195 0cb21ea211768e43fdaa2088fc461a36 445 SUPERFAMILY SSF63380 242 319 1.72E-15 T 31-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DY252_04195 0cb21ea211768e43fdaa2088fc461a36 445 Gene3D G3DSA:3.40.50.80 318 445 3.1E-16 T 31-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DY252_04195 0cb21ea211768e43fdaa2088fc461a36 445 PRINTS PR00410 Phenol hydroxylase reductase family signature 410 418 4.8E-8 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_04195 0cb21ea211768e43fdaa2088fc461a36 445 PRINTS PR00410 Phenol hydroxylase reductase family signature 313 322 4.8E-8 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_04195 0cb21ea211768e43fdaa2088fc461a36 445 PRINTS PR00410 Phenol hydroxylase reductase family signature 328 347 4.8E-8 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_04195 0cb21ea211768e43fdaa2088fc461a36 445 PRINTS PR00410 Phenol hydroxylase reductase family signature 253 265 4.8E-8 T 31-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DY252_20235 64a1a2c7561a5a86154b0c0c2913f0a7 105 Gene3D G3DSA:1.10.287.1080 5 101 4.1E-12 T 31-10-2018 DY252_20235 64a1a2c7561a5a86154b0c0c2913f0a7 105 SUPERFAMILY SSF101386 11 95 3.2E-14 T 31-10-2018 DY252_20235 64a1a2c7561a5a86154b0c0c2913f0a7 105 Pfam PF12643 MazG-like family 41 101 1.3E-6 T 31-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 DY252_17640 eadf9afb85cda11a06654dafcab7522b 166 Gene3D G3DSA:1.20.120.340 1 124 2.5E-38 T 31-10-2018 DY252_17640 eadf9afb85cda11a06654dafcab7522b 166 Pfam PF02561 Flagellar protein FliS 7 119 2.4E-34 T 31-10-2018 IPR003713 Flagellar protein FliS GO:0044780 DY252_17640 eadf9afb85cda11a06654dafcab7522b 166 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 119 5.5E-26 T 31-10-2018 IPR003713 Flagellar protein FliS GO:0044780 DY252_17640 eadf9afb85cda11a06654dafcab7522b 166 SUPERFAMILY SSF101116 5 122 5.36E-32 T 31-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 DY252_16715 6393b0c4135ffbbd7958785e41eb2c3a 691 Gene3D G3DSA:3.30.450.20 64 214 3.3E-49 T 31-10-2018 DY252_16715 6393b0c4135ffbbd7958785e41eb2c3a 691 SUPERFAMILY SSF58104 369 684 3.79E-61 T 31-10-2018 DY252_16715 6393b0c4135ffbbd7958785e41eb2c3a 691 Gene3D G3DSA:3.30.450.20 53 308 3.3E-49 T 31-10-2018 DY252_16715 6393b0c4135ffbbd7958785e41eb2c3a 691 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 508 652 8.5E-31 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_16715 6393b0c4135ffbbd7958785e41eb2c3a 691 SMART SM00304 341 394 7.4E-4 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_16715 6393b0c4135ffbbd7958785e41eb2c3a 691 SMART SM00283 431 685 7.0E-49 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_16715 6393b0c4135ffbbd7958785e41eb2c3a 691 Gene3D G3DSA:1.10.287.950 400 691 3.6E-54 T 31-10-2018 DY252_16715 6393b0c4135ffbbd7958785e41eb2c3a 691 Gene3D G3DSA:1.20.1480.50 309 399 1.2E-13 T 31-10-2018 DY252_16715 6393b0c4135ffbbd7958785e41eb2c3a 691 Pfam PF02743 Cache domain 66 302 2.4E-19 T 31-10-2018 IPR033479 Double Cache domain 1 DY252_16390 51f5e916da509feaae0c51387bb2e665 160 Pfam PF08281 Sigma-70, region 4 101 146 1.9E-8 T 31-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DY252_16390 51f5e916da509feaae0c51387bb2e665 160 Gene3D G3DSA:1.10.1740.10 1 67 4.9E-8 T 31-10-2018 DY252_16390 51f5e916da509feaae0c51387bb2e665 160 SUPERFAMILY SSF88946 3 74 5.49E-12 T 31-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DY252_16390 51f5e916da509feaae0c51387bb2e665 160 SUPERFAMILY SSF88659 82 158 1.12E-12 T 31-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DY252_16390 51f5e916da509feaae0c51387bb2e665 160 Gene3D G3DSA:1.10.10.10 78 157 6.1E-10 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_16390 51f5e916da509feaae0c51387bb2e665 160 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 156 1.6E-19 T 31-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DY252_16390 51f5e916da509feaae0c51387bb2e665 160 Pfam PF04542 Sigma-70 region 2 5 64 5.2E-10 T 31-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DY252_16120 dcd751753f03ce6d603083ad890e5155 288 SUPERFAMILY SSF56317 26 285 5.23E-73 T 31-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DY252_16120 dcd751753f03ce6d603083ad890e5155 288 Gene3D G3DSA:3.60.110.10 1 287 4.1E-107 T 31-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DY252_16120 dcd751753f03ce6d603083ad890e5155 288 Pfam PF00795 Carbon-nitrogen hydrolase 26 267 6.7E-60 T 31-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DY252_13995 2fe11162e6afe54c9a719b154bf7ed59 160 Pfam PF00583 Acetyltransferase (GNAT) family 82 128 6.3E-7 T 31-10-2018 IPR000182 GNAT domain DY252_13995 2fe11162e6afe54c9a719b154bf7ed59 160 Gene3D G3DSA:3.40.630.30 7 155 9.9E-15 T 31-10-2018 DY252_13995 2fe11162e6afe54c9a719b154bf7ed59 160 SUPERFAMILY SSF55729 19 157 2.42E-15 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_00735 15f9a7d7f3e23d78d7bf7a73f7a6e1b7 165 SUPERFAMILY SSF49764 30 134 4.19E-20 T 31-10-2018 IPR008978 HSP20-like chaperone DY252_00735 15f9a7d7f3e23d78d7bf7a73f7a6e1b7 165 Gene3D G3DSA:2.60.40.790 32 135 1.3E-20 T 31-10-2018 IPR008978 HSP20-like chaperone DY252_00735 15f9a7d7f3e23d78d7bf7a73f7a6e1b7 165 Pfam PF00011 Hsp20/alpha crystallin family 43 134 1.1E-17 T 31-10-2018 IPR002068 Alpha crystallin/Hsp20 domain DY252_02270 e1b5cdd46bf8de0099984ccaa8e1fa09 134 SMART SM00422 9 76 3.1E-24 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_02270 e1b5cdd46bf8de0099984ccaa8e1fa09 134 SUPERFAMILY SSF46955 9 115 7.33E-26 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_02270 e1b5cdd46bf8de0099984ccaa8e1fa09 134 Gene3D G3DSA:1.10.1660.10 9 130 5.3E-28 T 31-10-2018 DY252_02270 e1b5cdd46bf8de0099984ccaa8e1fa09 134 Pfam PF13411 MerR HTH family regulatory protein 9 74 3.5E-16 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_20530 f3410d904011cbc9f3bc754150c2517c 166 Pfam PF06754 Phosphonate metabolism protein PhnG 27 163 8.8E-48 T 31-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DY252_20530 f3410d904011cbc9f3bc754150c2517c 166 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 27 164 7.0E-46 T 31-10-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DY252_12510 c4e88e72671ecd099223c6d17933dc02 412 Pfam PF01494 FAD binding domain 4 263 2.2E-17 T 31-10-2018 IPR002938 FAD-binding domain GO:0071949 DY252_12510 c4e88e72671ecd099223c6d17933dc02 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 7.6E-6 T 31-10-2018 DY252_12510 c4e88e72671ecd099223c6d17933dc02 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 7.6E-6 T 31-10-2018 DY252_12510 c4e88e72671ecd099223c6d17933dc02 412 Gene3D G3DSA:3.50.50.60 2 412 7.6E-122 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_12510 c4e88e72671ecd099223c6d17933dc02 412 SUPERFAMILY SSF51905 3 361 3.62E-46 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_07750 1888ac4df97795f9e387be69a9c829d9 393 Pfam PF03743 Bacterial conjugation TrbI-like protein 210 387 7.8E-58 T 31-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI DY252_07750 1888ac4df97795f9e387be69a9c829d9 393 Gene3D G3DSA:1.10.1200.160 334 366 1.7E-56 T 31-10-2018 DY252_07750 1888ac4df97795f9e387be69a9c829d9 393 Gene3D G3DSA:2.40.128.260 212 385 1.7E-56 T 31-10-2018 DY252_11890 de520ec2895133ef0fe8192a0b6c99d5 342 Gene3D G3DSA:3.30.450.20 117 241 1.3E-9 T 31-10-2018 DY252_11890 de520ec2895133ef0fe8192a0b6c99d5 342 Gene3D G3DSA:1.10.287.950 3 113 3.5E-20 T 31-10-2018 DY252_11890 de520ec2895133ef0fe8192a0b6c99d5 342 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 14 91 2.2E-15 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_11890 de520ec2895133ef0fe8192a0b6c99d5 342 SUPERFAMILY SSF58104 11 90 3.14E-22 T 31-10-2018 DY252_11890 de520ec2895133ef0fe8192a0b6c99d5 342 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 22 49 2.8E-9 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_11890 de520ec2895133ef0fe8192a0b6c99d5 342 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 51 80 2.8E-9 T 31-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DY252_21345 d9ca327f09f826235678c7b745057c81 97 Pfam PF05284 Protein of unknown function (DUF736) 3 97 6.1E-31 T 31-10-2018 IPR007948 Protein of unknown function DUF736 DY252_19845 bf79123f867950d61e3c90738f0c2c82 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 8.2E-6 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_19845 bf79123f867950d61e3c90738f0c2c82 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 8.2E-6 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_19845 bf79123f867950d61e3c90738f0c2c82 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 126 8.2E-6 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_19845 bf79123f867950d61e3c90738f0c2c82 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 223 237 8.2E-6 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_19845 bf79123f867950d61e3c90738f0c2c82 281 Pfam PF12697 Alpha/beta hydrolase family 29 267 2.0E-15 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_19845 bf79123f867950d61e3c90738f0c2c82 281 Gene3D G3DSA:3.40.50.1820 6 278 1.3E-68 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_19845 bf79123f867950d61e3c90738f0c2c82 281 SUPERFAMILY SSF53474 2 276 1.56E-47 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_10185 e9f9430d9b13afc265f4fea9372e65cb 371 Gene3D G3DSA:3.40.50.720 3 353 9.5E-141 T 31-10-2018 DY252_10185 e9f9430d9b13afc265f4fea9372e65cb 371 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 371 5.8E-162 T 31-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 DY252_10185 e9f9430d9b13afc265f4fea9372e65cb 371 SUPERFAMILY SSF51735 137 303 1.03E-50 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_10185 e9f9430d9b13afc265f4fea9372e65cb 371 SUPERFAMILY SSF52283 1 360 5.02E-69 T 31-10-2018 DY252_10185 e9f9430d9b13afc265f4fea9372e65cb 371 SMART SM01003 4 137 1.0E-80 T 31-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DY252_10185 e9f9430d9b13afc265f4fea9372e65cb 371 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 1.9E-5 T 31-10-2018 DY252_10185 e9f9430d9b13afc265f4fea9372e65cb 371 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 287 294 1.9E-5 T 31-10-2018 DY252_10185 e9f9430d9b13afc265f4fea9372e65cb 371 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 31-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 DY252_10185 e9f9430d9b13afc265f4fea9372e65cb 371 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 353 6.2E-84 T 31-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DY252_10185 e9f9430d9b13afc265f4fea9372e65cb 371 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.2E-47 T 31-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DY252_10185 e9f9430d9b13afc265f4fea9372e65cb 371 Gene3D G3DSA:3.40.50.720 130 305 9.5E-141 T 31-10-2018 DY252_10185 e9f9430d9b13afc265f4fea9372e65cb 371 PIRSF PIRSF000183 1 371 3.8E-160 T 31-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 DY252_10185 e9f9430d9b13afc265f4fea9372e65cb 371 SMART SM01002 149 297 3.6E-87 T 31-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DY252_12500 9c8ddec902536e388b3fe79f685d9a87 212 Gene3D G3DSA:2.50.20.10 35 207 3.5E-13 T 31-10-2018 DY252_12500 9c8ddec902536e388b3fe79f685d9a87 212 SUPERFAMILY SSF89392 37 194 2.9E-7 T 31-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX DY252_20320 13b4673855c7da9ae3c01c387af624f6 329 Gene3D G3DSA:1.20.58.340 136 268 3.1E-29 T 31-10-2018 DY252_20320 13b4673855c7da9ae3c01c387af624f6 329 SUPERFAMILY SSF143865 4 260 8.11E-44 T 31-10-2018 DY252_20320 13b4673855c7da9ae3c01c387af624f6 329 SUPERFAMILY SSF144083 264 326 1.96E-15 T 31-10-2018 DY252_20320 13b4673855c7da9ae3c01c387af624f6 329 Gene3D G3DSA:1.20.58.340 272 329 1.5E-11 T 31-10-2018 DY252_20320 13b4673855c7da9ae3c01c387af624f6 329 Pfam PF01544 CorA-like Mg2+ transporter protein 37 325 3.1E-53 T 31-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 DY252_20320 13b4673855c7da9ae3c01c387af624f6 329 Gene3D G3DSA:3.30.460.20 1 135 2.3E-34 T 31-10-2018 DY252_20035 0e1ed031bdaae237b79102a559dd5104 335 SUPERFAMILY SSF50331 236 329 2.16E-20 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_20035 0e1ed031bdaae237b79102a559dd5104 335 SMART SM00382 28 211 2.6E-14 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_20035 0e1ed031bdaae237b79102a559dd5104 335 Pfam PF00005 ABC transporter 21 161 1.6E-31 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_20035 0e1ed031bdaae237b79102a559dd5104 335 Gene3D G3DSA:3.40.50.300 3 221 3.5E-64 T 31-10-2018 DY252_20035 0e1ed031bdaae237b79102a559dd5104 335 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_20035 0e1ed031bdaae237b79102a559dd5104 335 Gene3D G3DSA:2.40.50.940 222 248 5.9E-13 T 31-10-2018 DY252_20035 0e1ed031bdaae237b79102a559dd5104 335 SUPERFAMILY SSF52540 4 241 2.88E-85 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_20035 0e1ed031bdaae237b79102a559dd5104 335 Gene3D G3DSA:2.40.50.140 262 317 2.9E-11 T 31-10-2018 DY252_20035 0e1ed031bdaae237b79102a559dd5104 335 Pfam PF08402 TOBE domain 255 325 9.1E-8 T 31-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DY252_20035 0e1ed031bdaae237b79102a559dd5104 335 Gene3D G3DSA:2.40.50.100 254 333 2.9E-11 T 31-10-2018 DY252_10895 e01a3f239c6cdfba58edca78290250aa 450 Gene3D G3DSA:3.30.1330.60 310 450 1.0E-16 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_10895 e01a3f239c6cdfba58edca78290250aa 450 SUPERFAMILY SSF103088 337 448 3.53E-18 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_10895 e01a3f239c6cdfba58edca78290250aa 450 Pfam PF00691 OmpA family 342 441 1.8E-9 T 31-10-2018 IPR006665 OmpA-like domain DY252_19120 58ac92d247812cd070d4ffdba77cacd5 364 PIRSF PIRSF039026 1 360 1.3E-130 T 31-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like DY252_19120 58ac92d247812cd070d4ffdba77cacd5 364 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 49 323 1.9E-43 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_19120 58ac92d247812cd070d4ffdba77cacd5 364 Gene3D G3DSA:3.40.190.10 153 324 2.7E-108 T 31-10-2018 DY252_19120 58ac92d247812cd070d4ffdba77cacd5 364 SUPERFAMILY SSF53850 144 226 9.77E-5 T 31-10-2018 DY252_19120 58ac92d247812cd070d4ffdba77cacd5 364 Gene3D G3DSA:3.40.190.170 33 338 2.7E-108 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_10670 f1c1d8632b26ffd2ab09d5bff42739dd 280 SUPERFAMILY SSF52540 6 248 1.77E-57 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_10670 f1c1d8632b26ffd2ab09d5bff42739dd 280 Gene3D G3DSA:3.40.50.300 4 279 4.9E-80 T 31-10-2018 DY252_10670 f1c1d8632b26ffd2ab09d5bff42739dd 280 Pfam PF00005 ABC transporter 29 184 5.5E-24 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_10670 f1c1d8632b26ffd2ab09d5bff42739dd 280 SMART SM00382 34 233 3.0E-10 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_01210 efe56a8ae7b17e50753708d554ef32cc 143 Pfam PF02635 DsrE/DsrF-like family 10 129 5.2E-6 T 31-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein DY252_01210 efe56a8ae7b17e50753708d554ef32cc 143 Gene3D G3DSA:3.40.1260.10 3 143 1.2E-21 T 31-10-2018 IPR027396 DsrEFH-like DY252_01210 efe56a8ae7b17e50753708d554ef32cc 143 SUPERFAMILY SSF75169 9 137 7.91E-15 T 31-10-2018 IPR027396 DsrEFH-like DY252_06115 86edbf9b1e034036ed9cab477645def7 313 Gene3D G3DSA:3.40.50.2300 135 297 3.1E-73 T 31-10-2018 DY252_06115 86edbf9b1e034036ed9cab477645def7 313 Gene3D G3DSA:3.40.50.2300 39 295 3.1E-73 T 31-10-2018 DY252_06115 86edbf9b1e034036ed9cab477645def7 313 SUPERFAMILY SSF53822 32 305 4.08E-50 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_06115 86edbf9b1e034036ed9cab477645def7 313 Pfam PF13407 Periplasmic binding protein domain 30 280 5.6E-44 T 31-10-2018 IPR025997 Periplasmic binding protein DY252_17545 4e50e119c1e58392ad71a25a526ab896 252 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 175 245 1.3E-12 T 31-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DY252_17545 4e50e119c1e58392ad71a25a526ab896 252 SUPERFAMILY SSF117143 82 208 6.15E-17 T 31-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DY252_17545 4e50e119c1e58392ad71a25a526ab896 252 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 126 1.7E-33 T 31-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DY252_01785 754d8f0b5d30a51d1cae0b001c3b6758 279 Pfam PF00535 Glycosyl transferase family 2 5 121 7.6E-20 T 31-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DY252_01785 754d8f0b5d30a51d1cae0b001c3b6758 279 SUPERFAMILY SSF53448 3 243 1.13E-38 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_01785 754d8f0b5d30a51d1cae0b001c3b6758 279 Gene3D G3DSA:3.90.550.10 1 250 1.8E-46 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_01785 754d8f0b5d30a51d1cae0b001c3b6758 279 Pfam PF02709 N-terminal domain of galactosyltransferase 177 237 2.5E-10 T 31-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 DY252_04185 6bf6ecd9ae9bbd9ef6608e3ee46a8fec 234 SUPERFAMILY SSF47616 102 230 3.76E-32 T 31-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DY252_04185 6bf6ecd9ae9bbd9ef6608e3ee46a8fec 234 Gene3D G3DSA:1.20.1050.10 106 221 9.0E-107 T 31-10-2018 DY252_04185 6bf6ecd9ae9bbd9ef6608e3ee46a8fec 234 Pfam PF02798 Glutathione S-transferase, N-terminal domain 21 99 8.6E-14 T 31-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DY252_04185 6bf6ecd9ae9bbd9ef6608e3ee46a8fec 234 Gene3D G3DSA:3.40.30.10 7 231 9.0E-107 T 31-10-2018 DY252_04185 6bf6ecd9ae9bbd9ef6608e3ee46a8fec 234 Pfam PF00043 Glutathione S-transferase, C-terminal domain 139 222 1.4E-9 T 31-10-2018 IPR004046 Glutathione S-transferase, C-terminal DY252_04185 6bf6ecd9ae9bbd9ef6608e3ee46a8fec 234 SUPERFAMILY SSF52833 12 102 3.02E-23 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_20915 26a577c61b65df5b1a8ea0bc18da3aff 79 Pfam PF10038 Protein of unknown function (DUF2274) 1 70 2.9E-36 T 31-10-2018 IPR018733 Protein of unknown function DUF2274 DY252_20370 96bf54594c9d64a891b0f05c5dd268ac 267 SUPERFAMILY SSF55120 17 242 1.15E-57 T 31-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_20370 96bf54594c9d64a891b0f05c5dd268ac 267 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 64 78 - T 31-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_20370 96bf54594c9d64a891b0f05c5dd268ac 267 Pfam PF00849 RNA pseudouridylate synthase 24 177 4.1E-31 T 31-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_20370 96bf54594c9d64a891b0f05c5dd268ac 267 Gene3D G3DSA:3.30.2350.10 11 228 2.6E-56 T 31-10-2018 DY252_09630 879b4d91d6457231f337b6556f4ca939 205 Gene3D G3DSA:1.10.357.10 2 193 8.2E-55 T 31-10-2018 DY252_09630 879b4d91d6457231f337b6556f4ca939 205 SUPERFAMILY SSF48498 83 182 1.78E-21 T 31-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DY252_09630 879b4d91d6457231f337b6556f4ca939 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 1.1E-8 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_09630 879b4d91d6457231f337b6556f4ca939 205 Pfam PF13305 WHG domain 87 174 3.2E-18 T 31-10-2018 IPR025996 WHG domain DY252_09630 879b4d91d6457231f337b6556f4ca939 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.8E-5 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_09630 879b4d91d6457231f337b6556f4ca939 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.8E-5 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_09630 879b4d91d6457231f337b6556f4ca939 205 SUPERFAMILY SSF46689 3 76 5.99E-15 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_17905 660a3806e92db3943f66c73609752e8e 124 Pfam PF00376 MerR family regulatory protein 3 39 3.1E-15 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_17905 660a3806e92db3943f66c73609752e8e 124 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.5E-6 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_17905 660a3806e92db3943f66c73609752e8e 124 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.5E-6 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_17905 660a3806e92db3943f66c73609752e8e 124 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.5E-6 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_17905 660a3806e92db3943f66c73609752e8e 124 SMART SM00422 1 70 5.7E-18 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_17905 660a3806e92db3943f66c73609752e8e 124 Gene3D G3DSA:1.10.1660.10 1 122 1.4E-31 T 31-10-2018 DY252_17905 660a3806e92db3943f66c73609752e8e 124 SUPERFAMILY SSF46955 1 114 4.4E-29 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_02610 728d1a4878e476b35dae74fafa182572 442 ProSitePatterns PS01219 Ammonium transporters signature. 193 218 - T 31-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 DY252_02610 728d1a4878e476b35dae74fafa182572 442 TIGRFAM TIGR00836 amt: ammonium transporter 45 432 1.3E-104 T 31-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 DY252_02610 728d1a4878e476b35dae74fafa182572 442 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 38 435 2.7E-185 T 31-10-2018 IPR019879 Ammonium transporter, marine subtype DY252_02610 728d1a4878e476b35dae74fafa182572 442 Pfam PF00909 Ammonium Transporter Family 45 432 2.7E-102 T 31-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 DY252_02610 728d1a4878e476b35dae74fafa182572 442 SUPERFAMILY SSF111352 41 413 2.88E-105 T 31-10-2018 DY252_02610 728d1a4878e476b35dae74fafa182572 442 Gene3D G3DSA:1.10.3430.10 32 441 3.3E-124 T 31-10-2018 IPR029020 Ammonium/urea transporter DY252_11235 5aa909ab119ac290b179ec234e0b1865 425 ProSitePatterns PS00216 Sugar transport proteins signature 1. 85 101 - T 31-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DY252_11235 5aa909ab119ac290b179ec234e0b1865 425 Pfam PF07690 Major Facilitator Superfamily 36 254 1.3E-22 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_11235 5aa909ab119ac290b179ec234e0b1865 425 SUPERFAMILY SSF103473 19 414 8.24E-56 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_11235 5aa909ab119ac290b179ec234e0b1865 425 Gene3D G3DSA:1.20.1250.20 26 418 7.0E-44 T 31-10-2018 DY252_09720 b5f93bd30307f289a10955f070bdea81 231 Pfam PF02586 SOS response associated peptidase (SRAP) 73 203 7.5E-30 T 31-10-2018 IPR003738 SOS response associated peptidase (SRAP) DY252_09720 b5f93bd30307f289a10955f070bdea81 231 SUPERFAMILY SSF143081 55 209 5.1E-43 T 31-10-2018 IPR036590 SOS response associated peptidase-like DY252_09720 b5f93bd30307f289a10955f070bdea81 231 Gene3D G3DSA:3.90.1680.10 1 217 5.4E-38 T 31-10-2018 IPR036590 SOS response associated peptidase-like DY252_12465 96c3a53a284fbb9320b083f22024ad56 280 SUPERFAMILY SSF69593 44 271 4.45E-28 T 31-10-2018 DY252_12465 96c3a53a284fbb9320b083f22024ad56 280 SMART SM00563 102 212 5.3E-24 T 31-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DY252_12465 96c3a53a284fbb9320b083f22024ad56 280 Pfam PF01553 Acyltransferase 88 209 8.5E-17 T 31-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DY252_15300 fa5224032dfa1e77a1781ccfeaa3a423 486 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 15 461 46.042 T 31-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DY252_15300 fa5224032dfa1e77a1781ccfeaa3a423 486 Pfam PF13537 Glutamine amidotransferase domain 98 211 2.6E-18 T 31-10-2018 IPR017932 Glutamine amidotransferase type 2 domain DY252_15300 fa5224032dfa1e77a1781ccfeaa3a423 486 Pfam PF00156 Phosphoribosyl transferase domain 280 385 8.7E-10 T 31-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DY252_15300 fa5224032dfa1e77a1781ccfeaa3a423 486 SUPERFAMILY SSF56235 16 243 2.23E-65 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_15300 fa5224032dfa1e77a1781ccfeaa3a423 486 PIRSF PIRSF000485 12 478 8.7E-166 T 31-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DY252_15300 fa5224032dfa1e77a1781ccfeaa3a423 486 SUPERFAMILY SSF53271 250 471 1.05E-74 T 31-10-2018 IPR029057 Phosphoribosyltransferase-like DY252_15300 fa5224032dfa1e77a1781ccfeaa3a423 486 Gene3D G3DSA:3.40.50.2020 275 439 5.5E-154 T 31-10-2018 DY252_15300 fa5224032dfa1e77a1781ccfeaa3a423 486 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 16 462 9.2E-154 T 31-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DY252_15300 fa5224032dfa1e77a1781ccfeaa3a423 486 Gene3D G3DSA:3.60.20.10 16 463 5.5E-154 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_05895 c16adeaa53a46df003c7b5eb98ac1dc6 272 Gene3D G3DSA:3.10.50.40 110 215 5.4E-22 T 31-10-2018 DY252_05895 c16adeaa53a46df003c7b5eb98ac1dc6 272 Pfam PF00639 PPIC-type PPIASE domain 120 214 1.6E-21 T 31-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 DY252_05895 c16adeaa53a46df003c7b5eb98ac1dc6 272 SUPERFAMILY SSF54534 114 215 6.34E-21 T 31-10-2018 DY252_05895 c16adeaa53a46df003c7b5eb98ac1dc6 272 SUPERFAMILY SSF109998 10 128 1.45E-6 T 31-10-2018 IPR027304 Trigger factor/SurA domain superfamily DY252_12610 26b2b169ae9dcd3f0f1dcc575efa977b 162 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 9 139 1.9E-15 T 31-10-2018 IPR009936 Protein of unknown function DUF1468 DY252_17365 ac47893e08a1d98bd855c9da057e8cb3 333 Pfam PF12833 Helix-turn-helix domain 255 329 6.6E-16 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_17365 ac47893e08a1d98bd855c9da057e8cb3 333 Gene3D G3DSA:1.10.10.60 232 330 1.2E-19 T 31-10-2018 DY252_17365 ac47893e08a1d98bd855c9da057e8cb3 333 SUPERFAMILY SSF46689 282 330 9.41E-8 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_17365 ac47893e08a1d98bd855c9da057e8cb3 333 SMART SM00342 246 328 2.1E-8 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_13640 66d2070727b46ebb151d5b7e6709cc77 370 Pfam PF00005 ABC transporter 19 161 8.3E-33 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_13640 66d2070727b46ebb151d5b7e6709cc77 370 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_13640 66d2070727b46ebb151d5b7e6709cc77 370 SMART SM00382 28 212 2.9E-13 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_13640 66d2070727b46ebb151d5b7e6709cc77 370 Gene3D G3DSA:3.40.50.300 1 238 2.2E-77 T 31-10-2018 DY252_13640 66d2070727b46ebb151d5b7e6709cc77 370 SUPERFAMILY SSF52540 4 243 3.78E-86 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_13640 66d2070727b46ebb151d5b7e6709cc77 370 Gene3D G3DSA:2.40.50.140 288 355 8.0E-22 T 31-10-2018 DY252_13640 66d2070727b46ebb151d5b7e6709cc77 370 Gene3D G3DSA:2.40.50.100 239 367 8.0E-22 T 31-10-2018 DY252_13640 66d2070727b46ebb151d5b7e6709cc77 370 Pfam PF03459 TOBE domain 311 360 7.2E-8 T 31-10-2018 IPR005116 Transport-associated OB, type 1 DY252_13640 66d2070727b46ebb151d5b7e6709cc77 370 SUPERFAMILY SSF50331 236 370 2.67E-26 T 31-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DY252_10120 9a59f5312e2ced020575de4871dadf36 371 SUPERFAMILY SSF51717 105 366 1.31E-95 T 31-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_10120 9a59f5312e2ced020575de4871dadf36 371 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 112 366 1.7E-97 T 31-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 DY252_10120 9a59f5312e2ced020575de4871dadf36 371 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 146 159 - T 31-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_10120 9a59f5312e2ced020575de4871dadf36 371 Gene3D G3DSA:3.20.20.20 95 370 8.9E-106 T 31-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_10120 9a59f5312e2ced020575de4871dadf36 371 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 112 127 - T 31-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_10120 9a59f5312e2ced020575de4871dadf36 371 Pfam PF00809 Pterin binding enzyme 113 353 1.6E-81 T 31-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DY252_17140 0723a5a4bf89e9076f75f8d5ceb853ee 554 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 275 289 - T 31-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DY252_17140 0723a5a4bf89e9076f75f8d5ceb853ee 554 Gene3D G3DSA:3.30.560.10 45 489 3.7E-175 T 31-10-2018 DY252_17140 0723a5a4bf89e9076f75f8d5ceb853ee 554 PIRSF PIRSF000137 1 554 1.3E-146 T 31-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DY252_17140 0723a5a4bf89e9076f75f8d5ceb853ee 554 Pfam PF05199 GMC oxidoreductase 408 546 5.0E-37 T 31-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 DY252_17140 0723a5a4bf89e9076f75f8d5ceb853ee 554 SUPERFAMILY SSF51905 3 553 5.37E-77 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_17140 0723a5a4bf89e9076f75f8d5ceb853ee 554 SUPERFAMILY SSF54373 311 494 1.18E-55 T 31-10-2018 DY252_17140 0723a5a4bf89e9076f75f8d5ceb853ee 554 Pfam PF00732 GMC oxidoreductase 7 316 6.9E-73 T 31-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DY252_17140 0723a5a4bf89e9076f75f8d5ceb853ee 554 Gene3D G3DSA:3.50.50.60 7 550 3.7E-175 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_02675 223cc6942153075d2984d118fc1e7af9 1588 SUPERFAMILY SSF53223 735 921 1.44E-23 T 31-10-2018 DY252_02675 223cc6942153075d2984d118fc1e7af9 1588 SUPERFAMILY SSF51735 926 1235 4.07E-31 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_02675 223cc6942153075d2984d118fc1e7af9 1588 PIRSF PIRSF036761 2 1588 0.0 T 31-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 DY252_02675 223cc6942153075d2984d118fc1e7af9 1588 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 55 1583 0.0 T 31-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 DY252_12245 97cdcdc0885574603e1b141f21ded8cb 942 Pfam PF00005 ABC transporter 802 859 4.7E-6 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_12245 97cdcdc0885574603e1b141f21ded8cb 942 Gene3D G3DSA:3.30.190.20 131 243 1.7E-247 T 31-10-2018 DY252_12245 97cdcdc0885574603e1b141f21ded8cb 942 Gene3D G3DSA:1.20.1580.10 692 829 8.9E-142 T 31-10-2018 DY252_12245 97cdcdc0885574603e1b141f21ded8cb 942 SUPERFAMILY SSF52540 5 570 1.02E-48 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12245 97cdcdc0885574603e1b141f21ded8cb 942 SUPERFAMILY SSF52540 614 908 8.0E-48 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12245 97cdcdc0885574603e1b141f21ded8cb 942 Gene3D G3DSA:1.20.1580.10 91 493 1.7E-247 T 31-10-2018 DY252_12245 97cdcdc0885574603e1b141f21ded8cb 942 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 923 0.0 T 31-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 DY252_12245 97cdcdc0885574603e1b141f21ded8cb 942 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_12245 97cdcdc0885574603e1b141f21ded8cb 942 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 939 22.799 T 31-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 DY252_12245 97cdcdc0885574603e1b141f21ded8cb 942 Gene3D G3DSA:3.40.50.300 613 935 8.9E-142 T 31-10-2018 DY252_12245 97cdcdc0885574603e1b141f21ded8cb 942 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_12245 97cdcdc0885574603e1b141f21ded8cb 942 Gene3D G3DSA:1.10.8.280 286 402 1.7E-247 T 31-10-2018 DY252_12245 97cdcdc0885574603e1b141f21ded8cb 942 Gene3D G3DSA:3.40.50.300 7 595 1.7E-247 T 31-10-2018 DY252_00565 842c60fa3216d0f2c1ae7cee1d258204 451 Gene3D G3DSA:3.40.50.300 138 319 9.0E-62 T 31-10-2018 DY252_00565 842c60fa3216d0f2c1ae7cee1d258204 451 Pfam PF00072 Response regulator receiver domain 10 118 1.7E-27 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_00565 842c60fa3216d0f2c1ae7cee1d258204 451 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 235 250 - T 31-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DY252_00565 842c60fa3216d0f2c1ae7cee1d258204 451 Gene3D G3DSA:3.40.50.2300 5 137 2.1E-35 T 31-10-2018 DY252_00565 842c60fa3216d0f2c1ae7cee1d258204 451 Pfam PF00158 Sigma-54 interaction domain 149 315 7.7E-65 T 31-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DY252_00565 842c60fa3216d0f2c1ae7cee1d258204 451 SUPERFAMILY SSF46689 362 443 3.27E-8 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_00565 842c60fa3216d0f2c1ae7cee1d258204 451 SUPERFAMILY SSF52172 9 192 2.42E-42 T 31-10-2018 IPR011006 CheY-like superfamily DY252_00565 842c60fa3216d0f2c1ae7cee1d258204 451 SMART SM00448 8 119 5.6E-31 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_00565 842c60fa3216d0f2c1ae7cee1d258204 451 SUPERFAMILY SSF52540 148 379 3.68E-63 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_00565 842c60fa3216d0f2c1ae7cee1d258204 451 Gene3D G3DSA:1.10.10.60 387 445 3.1E-11 T 31-10-2018 DY252_00565 842c60fa3216d0f2c1ae7cee1d258204 451 Gene3D G3DSA:1.10.8.60 320 384 7.5E-16 T 31-10-2018 DY252_00565 842c60fa3216d0f2c1ae7cee1d258204 451 Pfam PF02954 Bacterial regulatory protein, Fis family 400 438 6.2E-9 T 31-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DY252_00565 842c60fa3216d0f2c1ae7cee1d258204 451 SMART SM00382 169 312 2.3E-9 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_00565 842c60fa3216d0f2c1ae7cee1d258204 451 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 362 371 - T 31-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DY252_11860 81fb06b53a1f19aa9a8de09ea48a3824 367 Gene3D G3DSA:1.10.3720.10 148 367 4.2E-47 T 31-10-2018 IPR035906 MetI-like superfamily DY252_11860 81fb06b53a1f19aa9a8de09ea48a3824 367 SUPERFAMILY SSF161098 153 350 7.19E-38 T 31-10-2018 IPR035906 MetI-like superfamily DY252_11860 81fb06b53a1f19aa9a8de09ea48a3824 367 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 174 363 3.8E-20 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_11860 81fb06b53a1f19aa9a8de09ea48a3824 367 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 252 9.3E-20 T 31-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DY252_16595 0e640420008d307d6e1b7abdea44a4de 192 Pfam PF17212 Tail tubular protein 11 176 2.7E-6 T 31-10-2018 IPR033767 Tail tubular protein Gp11 DY252_09905 fcaa854ff8994eb513275a3f6ef3e5d5 148 PIRSF PIRSF031796 1 146 5.5E-49 T 31-10-2018 IPR009394 DNA repair protein MmcB-like DY252_09905 fcaa854ff8994eb513275a3f6ef3e5d5 148 Pfam PF06319 DNA repair protein MmcB-like 5 140 2.3E-51 T 31-10-2018 IPR009394 DNA repair protein MmcB-like DY252_09905 fcaa854ff8994eb513275a3f6ef3e5d5 148 Gene3D G3DSA:3.40.1350.10 4 147 3.8E-57 T 31-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 DY252_09500 2c80d9a01b1ecd6bd5da2a7fcdd3c08f 323 Pfam PF08874 Domain of unknown function (DUF1835) 10 114 2.0E-9 T 31-10-2018 IPR014973 Protein of unknown function DUF1835 DY252_21830 f135242f708802f980771f24b8c7c5c6 392 SUPERFAMILY SSF109604 54 293 3.67E-29 T 31-10-2018 DY252_21830 f135242f708802f980771f24b8c7c5c6 392 Gene3D G3DSA:1.10.3210.10 48 293 4.2E-37 T 31-10-2018 DY252_21830 f135242f708802f980771f24b8c7c5c6 392 Pfam PF01966 HD domain 94 162 6.7E-12 T 31-10-2018 IPR006674 HD domain DY252_21830 f135242f708802f980771f24b8c7c5c6 392 SMART SM00471 90 255 9.2E-8 T 31-10-2018 IPR003607 HD/PDEase domain DY252_18650 cf605832dd4088bc4b392cd76cafe0b7 164 SUPERFAMILY SSF55729 18 150 1.68E-22 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_18650 cf605832dd4088bc4b392cd76cafe0b7 164 Pfam PF00583 Acetyltransferase (GNAT) family 38 138 9.1E-13 T 31-10-2018 IPR000182 GNAT domain DY252_18650 cf605832dd4088bc4b392cd76cafe0b7 164 Gene3D G3DSA:3.40.630.30 3 145 9.1E-21 T 31-10-2018 DY252_03145 10748fb759ff992c80cbd26b0bbf2b21 117 SUPERFAMILY SSF49472 1 117 7.06E-42 T 31-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DY252_03145 10748fb759ff992c80cbd26b0bbf2b21 117 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 31-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DY252_03145 10748fb759ff992c80cbd26b0bbf2b21 117 Pfam PF00576 HIUase/Transthyretin family 4 116 7.1E-36 T 31-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DY252_03145 10748fb759ff992c80cbd26b0bbf2b21 117 PRINTS PR00189 Transthyretin signature 3 23 1.4E-9 T 31-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DY252_03145 10748fb759ff992c80cbd26b0bbf2b21 117 PRINTS PR00189 Transthyretin signature 95 117 1.4E-9 T 31-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DY252_03145 10748fb759ff992c80cbd26b0bbf2b21 117 ProSitePatterns PS00769 Transthyretin signature 2. 100 112 - T 31-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DY252_03145 10748fb759ff992c80cbd26b0bbf2b21 117 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 117 4.6E-40 T 31-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DY252_03145 10748fb759ff992c80cbd26b0bbf2b21 117 Gene3D G3DSA:2.60.40.180 1 117 1.9E-42 T 31-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DY252_12605 282ce49079c50b8b85bdd7a8e240a2f7 333 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 75 330 5.5E-25 T 31-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DY252_12605 282ce49079c50b8b85bdd7a8e240a2f7 333 Gene3D G3DSA:3.40.190.10 133 259 9.1E-63 T 31-10-2018 DY252_12605 282ce49079c50b8b85bdd7a8e240a2f7 333 PIRSF PIRSF017082 1 333 6.6E-83 T 31-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DY252_12605 282ce49079c50b8b85bdd7a8e240a2f7 333 Gene3D G3DSA:3.40.190.150 39 322 9.1E-63 T 31-10-2018 DY252_12605 282ce49079c50b8b85bdd7a8e240a2f7 333 SUPERFAMILY SSF53850 73 285 4.34E-5 T 31-10-2018 DY252_12800 ba0d93e025dbb44b40a1a380d5d20110 118 SUPERFAMILY SSF54913 8 110 1.71E-31 T 31-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DY252_12800 ba0d93e025dbb44b40a1a380d5d20110 118 Gene3D G3DSA:3.30.70.120 6 114 2.2E-35 T 31-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DY252_12800 ba0d93e025dbb44b40a1a380d5d20110 118 Pfam PF03091 CutA1 divalent ion tolerance protein 14 109 4.1E-32 T 31-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 DY252_11635 a5345b54a7e89c018c5eb492d0d688ac 216 SMART SM01207 19 195 3.4E-83 T 31-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DY252_11635 a5345b54a7e89c018c5eb492d0d688ac 216 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 15 205 2.5E-53 T 31-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DY252_11635 a5345b54a7e89c018c5eb492d0d688ac 216 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 16 203 19.979 T 31-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DY252_11635 a5345b54a7e89c018c5eb492d0d688ac 216 Pfam PF02660 Glycerol-3-phosphate acyltransferase 21 194 1.3E-48 T 31-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DY252_17255 21c53fbf9658d068c79568b5feb47637 200 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 200 49.793 T 31-10-2018 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 DY252_17255 21c53fbf9658d068c79568b5feb47637 200 SUPERFAMILY SSF52218 2 198 2.1E-62 T 31-10-2018 IPR029039 Flavoprotein-like superfamily DY252_17255 21c53fbf9658d068c79568b5feb47637 200 Pfam PF03358 NADPH-dependent FMN reductase 13 142 1.7E-11 T 31-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DY252_17255 21c53fbf9658d068c79568b5feb47637 200 Gene3D G3DSA:3.40.50.360 1 200 1.6E-77 T 31-10-2018 IPR029039 Flavoprotein-like superfamily DY252_17255 21c53fbf9658d068c79568b5feb47637 200 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 198 6.8E-97 T 31-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 DY252_18995 7dc29eee8b49716c9d93f763abcec267 437 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 423 3.7E-90 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_18995 7dc29eee8b49716c9d93f763abcec267 437 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 429 3.4E-94 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_18995 7dc29eee8b49716c9d93f763abcec267 437 PIRSF PIRSF006066 6 435 4.5E-86 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_03030 b07f334ecc2e01378bfe31768e223c1f 206 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 45 52 - T 31-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DY252_03030 b07f334ecc2e01378bfe31768e223c1f 206 SUPERFAMILY SSF53056 5 202 5.36E-56 T 31-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DY252_03030 b07f334ecc2e01378bfe31768e223c1f 206 Pfam PF00484 Carbonic anhydrase 41 189 3.8E-44 T 31-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DY252_03030 b07f334ecc2e01378bfe31768e223c1f 206 Gene3D G3DSA:3.40.1050.10 1 202 9.7E-65 T 31-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DY252_03030 b07f334ecc2e01378bfe31768e223c1f 206 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 90 110 - T 31-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DY252_03030 b07f334ecc2e01378bfe31768e223c1f 206 SMART SM00947 33 195 4.2E-64 T 31-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DY252_01275 7d9df78abe8698a11fc0440f9f0cbeeb 199 SUPERFAMILY SSF54211 1 86 8.35E-35 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_01275 7d9df78abe8698a11fc0440f9f0cbeeb 199 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 31-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DY252_01275 7d9df78abe8698a11fc0440f9f0cbeeb 199 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 6.9E-66 T 31-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DY252_01275 7d9df78abe8698a11fc0440f9f0cbeeb 199 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 31-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DY252_01275 7d9df78abe8698a11fc0440f9f0cbeeb 199 SUPERFAMILY SSF54211 88 178 1.39E-36 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_01275 7d9df78abe8698a11fc0440f9f0cbeeb 199 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 43.96 T 31-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DY252_01275 7d9df78abe8698a11fc0440f9f0cbeeb 199 Gene3D G3DSA:3.30.230.40 1 89 1.3E-37 T 31-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 DY252_01275 7d9df78abe8698a11fc0440f9f0cbeeb 199 Gene3D G3DSA:3.30.230.40 90 197 1.2E-40 T 31-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 DY252_18275 d58f9ec6cca1064ed7609d281e74c198 266 SUPERFAMILY SSF52540 3 227 1.11E-58 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18275 d58f9ec6cca1064ed7609d281e74c198 266 Gene3D G3DSA:3.40.50.300 1 251 1.1E-65 T 31-10-2018 DY252_18275 d58f9ec6cca1064ed7609d281e74c198 266 Pfam PF00005 ABC transporter 19 167 2.6E-31 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_18275 d58f9ec6cca1064ed7609d281e74c198 266 SMART SM00382 27 211 3.5E-11 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_08350 c4ca6837196ab8613b78a0dce49d3494 242 Gene3D G3DSA:3.40.50.1820 50 230 9.8E-31 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_08350 c4ca6837196ab8613b78a0dce49d3494 242 SUPERFAMILY SSF53474 47 216 6.99E-26 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_07775 eea543a13288e476ef2b1a873d8dd4a1 1028 Gene3D G3DSA:3.40.50.150 298 592 1.1E-37 T 31-10-2018 DY252_07775 eea543a13288e476ef2b1a873d8dd4a1 1028 Pfam PF02384 N-6 DNA Methylase 298 563 9.7E-14 T 31-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 DY252_07775 eea543a13288e476ef2b1a873d8dd4a1 1028 SUPERFAMILY SSF53335 163 573 6.75E-40 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_07775 eea543a13288e476ef2b1a873d8dd4a1 1028 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 319 335 1.7E-14 T 31-10-2018 DY252_07775 eea543a13288e476ef2b1a873d8dd4a1 1028 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 455 467 1.7E-14 T 31-10-2018 DY252_07775 eea543a13288e476ef2b1a873d8dd4a1 1028 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 349 363 1.7E-14 T 31-10-2018 DY252_07775 eea543a13288e476ef2b1a873d8dd4a1 1028 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 489 513 1.7E-14 T 31-10-2018 DY252_07775 eea543a13288e476ef2b1a873d8dd4a1 1028 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 458 464 - T 31-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DY252_08755 2d7ed79a96e74bc95026b1200c127d16 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 184 5.2E-28 T 31-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DY252_08755 2d7ed79a96e74bc95026b1200c127d16 186 Gene3D G3DSA:1.10.10.10 95 186 8.3E-21 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_08755 2d7ed79a96e74bc95026b1200c127d16 186 Pfam PF08281 Sigma-70, region 4 128 180 5.4E-12 T 31-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DY252_08755 2d7ed79a96e74bc95026b1200c127d16 186 SUPERFAMILY SSF88946 7 112 5.1E-26 T 31-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DY252_08755 2d7ed79a96e74bc95026b1200c127d16 186 SUPERFAMILY SSF88659 120 185 4.14E-13 T 31-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DY252_08755 2d7ed79a96e74bc95026b1200c127d16 186 Pfam PF04542 Sigma-70 region 2 31 98 1.2E-16 T 31-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DY252_08755 2d7ed79a96e74bc95026b1200c127d16 186 Gene3D G3DSA:1.10.1740.10 12 94 6.0E-29 T 31-10-2018 DY252_09555 e64725507898250dac45ad85729aa214 87 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 18 78 15.091 T 31-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DY252_09555 e64725507898250dac45ad85729aa214 87 Pfam PF02609 Exonuclease VII small subunit 19 70 7.7E-20 T 31-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DY252_09555 e64725507898250dac45ad85729aa214 87 SUPERFAMILY SSF116842 11 78 1.83E-20 T 31-10-2018 DY252_09555 e64725507898250dac45ad85729aa214 87 Gene3D G3DSA:1.10.287.1040 13 85 1.7E-21 T 31-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 DY252_09555 e64725507898250dac45ad85729aa214 87 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 18 57 2.0E-9 T 31-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DY252_09555 e64725507898250dac45ad85729aa214 87 PIRSF PIRSF006488 3 86 5.0E-20 T 31-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DY252_09555 e64725507898250dac45ad85729aa214 87 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 18 72 2.5E-22 T 31-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DY252_06915 39a1afcae6708a39e407973e2f7e4496 148 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 9 136 1.6E-14 T 31-10-2018 IPR023485 Phosphotyrosine protein phosphatase I DY252_06915 39a1afcae6708a39e407973e2f7e4496 148 SMART SM00226 7 142 5.6E-14 T 31-10-2018 IPR023485 Phosphotyrosine protein phosphatase I DY252_06915 39a1afcae6708a39e407973e2f7e4496 148 Gene3D G3DSA:3.40.50.2300 7 140 7.1E-32 T 31-10-2018 DY252_06915 39a1afcae6708a39e407973e2f7e4496 148 SUPERFAMILY SSF52788 8 139 9.94E-32 T 31-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily DY252_07430 ac53491bd9af84f2e441a370d901899f 54 Pfam PF04325 Protein of unknown function (DUF465) 8 52 1.8E-12 T 31-10-2018 IPR007420 Protein of unknown function DUF465 DY252_07430 ac53491bd9af84f2e441a370d901899f 54 Gene3D G3DSA:1.20.58.660 2 54 2.9E-5 T 31-10-2018 DY252_09635 b6e9eb104ff8c7755540e332e472562f 204 Gene3D G3DSA:2.60.130.10 52 204 1.9E-53 T 31-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 DY252_09635 b6e9eb104ff8c7755540e332e472562f 204 SUPERFAMILY SSF49482 45 203 1.44E-48 T 31-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 DY252_09635 b6e9eb104ff8c7755540e332e472562f 204 Pfam PF00775 Dioxygenase 61 193 9.4E-21 T 31-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 DY252_00870 065f2e2a7cc213e4b4696a956f729762 282 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 39 274 8.2E-37 T 31-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 DY252_00870 065f2e2a7cc213e4b4696a956f729762 282 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 282 39.661 T 31-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 DY252_00870 065f2e2a7cc213e4b4696a956f729762 282 Pfam PF02654 Cobalamin-5-phosphate synthase 43 274 1.4E-44 T 31-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 DY252_13705 f137533ea51db24b997b3eb3ded7b7f9 182 SMART SM00530 8 63 8.5E-12 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_13705 f137533ea51db24b997b3eb3ded7b7f9 182 SUPERFAMILY SSF51182 71 176 4.46E-24 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_13705 f137533ea51db24b997b3eb3ded7b7f9 182 SUPERFAMILY SSF47413 3 67 2.82E-15 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_13705 f137533ea51db24b997b3eb3ded7b7f9 182 Gene3D G3DSA:1.10.260.40 1 68 8.3E-16 T 31-10-2018 DY252_13705 f137533ea51db24b997b3eb3ded7b7f9 182 Pfam PF07883 Cupin domain 108 175 1.8E-15 T 31-10-2018 IPR013096 Cupin 2, conserved barrel DY252_13705 f137533ea51db24b997b3eb3ded7b7f9 182 Pfam PF13560 Helix-turn-helix domain 6 53 2.5E-10 T 31-10-2018 DY252_13705 f137533ea51db24b997b3eb3ded7b7f9 182 Gene3D G3DSA:2.60.120.10 72 182 2.4E-18 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_17455 172ff783cc01afe8a7167556805e6a27 135 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 135 7.2E-45 T 31-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 DY252_17455 172ff783cc01afe8a7167556805e6a27 135 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 88 131 7.3E-11 T 31-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DY252_02950 18900388f3de358df3cab54d2dd8fedd 166 Gene3D G3DSA:1.20.120.450 4 161 4.2E-42 T 31-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DY252_02950 18900388f3de358df3cab54d2dd8fedd 166 SUPERFAMILY SSF109854 6 145 4.76E-37 T 31-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DY252_02950 18900388f3de358df3cab54d2dd8fedd 166 Pfam PF05163 DinB family 1 164 4.0E-37 T 31-10-2018 IPR007837 DNA damage-inducible protein DinB DY252_08710 c0bd62f770644d48076f841301db3f38 543 Gene3D G3DSA:3.90.400.10 109 179 1.2E-178 T 31-10-2018 DY252_08710 c0bd62f770644d48076f841301db3f38 543 Pfam PF11941 Domain of unknown function (DUF3459) 455 538 5.6E-5 T 31-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) DY252_08710 c0bd62f770644d48076f841301db3f38 543 Pfam PF00128 Alpha amylase, catalytic domain 32 381 4.4E-91 T 31-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DY252_08710 c0bd62f770644d48076f841301db3f38 543 SUPERFAMILY SSF51445 8 469 9.51E-132 T 31-10-2018 IPR017853 Glycoside hydrolase superfamily DY252_08710 c0bd62f770644d48076f841301db3f38 543 Gene3D G3DSA:3.20.20.80 9 464 1.2E-178 T 31-10-2018 DY252_08710 c0bd62f770644d48076f841301db3f38 543 SMART SM00642 17 408 7.9E-115 T 31-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DY252_08710 c0bd62f770644d48076f841301db3f38 543 SUPERFAMILY SSF51011 481 540 1.53E-5 T 31-10-2018 DY252_06625 9ba8133c78bbb8a57318cfcfbde530f4 235 SUPERFAMILY SSF51219 5 233 7.85E-84 T 31-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily DY252_06625 9ba8133c78bbb8a57318cfcfbde530f4 235 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 6 231 7.7E-43 T 31-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 DY252_06625 9ba8133c78bbb8a57318cfcfbde530f4 235 Pfam PF01987 Mitochondrial biogenesis AIM24 7 214 7.5E-72 T 31-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 DY252_06625 9ba8133c78bbb8a57318cfcfbde530f4 235 Gene3D G3DSA:3.60.160.10 1 235 5.7E-101 T 31-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily DY252_20100 2fdb5fdc0db88c7aa3442f50cccc845c 388 SUPERFAMILY SSF111369 68 283 1.07E-35 T 31-10-2018 DY252_20100 2fdb5fdc0db88c7aa3442f50cccc845c 388 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 68 359 9.4E-70 T 31-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DY252_20100 2fdb5fdc0db88c7aa3442f50cccc845c 388 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 81 277 8.5E-28 T 31-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DY252_20100 2fdb5fdc0db88c7aa3442f50cccc845c 388 Gene3D G3DSA:2.40.30.170 68 288 1.4E-63 T 31-10-2018 DY252_20100 2fdb5fdc0db88c7aa3442f50cccc845c 388 Gene3D G3DSA:2.40.50.100 78 206 1.4E-63 T 31-10-2018 DY252_20100 2fdb5fdc0db88c7aa3442f50cccc845c 388 Gene3D G3DSA:2.40.420.20 289 357 1.4E-63 T 31-10-2018 DY252_20100 2fdb5fdc0db88c7aa3442f50cccc845c 388 Gene3D G3DSA:1.10.287.470 113 172 1.4E-63 T 31-10-2018 DY252_18605 a67ff5ad8642dd3d453e90f2230643ee 162 Gene3D G3DSA:2.30.180.10 25 161 9.3E-52 T 31-10-2018 IPR036378 FAS1 domain superfamily DY252_18605 a67ff5ad8642dd3d453e90f2230643ee 162 SUPERFAMILY SSF82153 28 160 1.44E-40 T 31-10-2018 IPR036378 FAS1 domain superfamily DY252_18605 a67ff5ad8642dd3d453e90f2230643ee 162 SMART SM00554 62 161 2.4E-34 T 31-10-2018 IPR000782 FAS1 domain DY252_18605 a67ff5ad8642dd3d453e90f2230643ee 162 Pfam PF02469 Fasciclin domain 38 160 7.5E-38 T 31-10-2018 IPR000782 FAS1 domain DY252_00780 7d429467b96ce1e7b380ab93bcc83f3a 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 16 227 6.9E-45 T 31-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DY252_00780 7d429467b96ce1e7b380ab93bcc83f3a 287 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 94 127 - T 31-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DY252_00780 7d429467b96ce1e7b380ab93bcc83f3a 287 SUPERFAMILY SSF53790 13 261 5.37E-76 T 31-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DY252_00780 7d429467b96ce1e7b380ab93bcc83f3a 287 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 14 251 3.1E-88 T 31-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DY252_00780 7d429467b96ce1e7b380ab93bcc83f3a 287 Gene3D G3DSA:3.40.1010.10 13 129 1.4E-39 T 31-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DY252_00780 7d429467b96ce1e7b380ab93bcc83f3a 287 Gene3D G3DSA:3.30.950.10 130 274 6.7E-46 T 31-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DY252_00780 7d429467b96ce1e7b380ab93bcc83f3a 287 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 19 33 - T 31-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DY252_04460 a506753ca0054287df88f1eaeec32dc2 689 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 351 676 1.7E-77 T 31-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal DY252_04460 a506753ca0054287df88f1eaeec32dc2 689 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 168 185 1.7E-27 T 31-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_04460 a506753ca0054287df88f1eaeec32dc2 689 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 112 138 1.7E-27 T 31-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_04460 a506753ca0054287df88f1eaeec32dc2 689 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 280 300 1.7E-27 T 31-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_04460 a506753ca0054287df88f1eaeec32dc2 689 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 246 272 1.7E-27 T 31-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_04460 a506753ca0054287df88f1eaeec32dc2 689 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 330 1.7E-27 T 31-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_04460 a506753ca0054287df88f1eaeec32dc2 689 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 195 217 1.7E-27 T 31-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_04460 a506753ca0054287df88f1eaeec32dc2 689 Pfam PF01578 Cytochrome C assembly protein 126 331 3.4E-19 T 31-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DY252_08030 04e988bcdd8e40e584afeb10b3d6da5c 294 Pfam PF01842 ACT domain 4 54 9.0E-7 T 31-10-2018 IPR002912 ACT domain DY252_08030 04e988bcdd8e40e584afeb10b3d6da5c 294 Gene3D G3DSA:3.30.70.260 1 85 7.8E-27 T 31-10-2018 DY252_08030 04e988bcdd8e40e584afeb10b3d6da5c 294 Pfam PF00551 Formyl transferase 86 263 1.8E-37 T 31-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DY252_08030 04e988bcdd8e40e584afeb10b3d6da5c 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 87 109 7.3E-50 T 31-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DY252_08030 04e988bcdd8e40e584afeb10b3d6da5c 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 109 136 7.3E-50 T 31-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DY252_08030 04e988bcdd8e40e584afeb10b3d6da5c 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 233 255 7.3E-50 T 31-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DY252_08030 04e988bcdd8e40e584afeb10b3d6da5c 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 7.3E-50 T 31-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DY252_08030 04e988bcdd8e40e584afeb10b3d6da5c 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 255 280 7.3E-50 T 31-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DY252_08030 04e988bcdd8e40e584afeb10b3d6da5c 294 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 7.3E-50 T 31-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DY252_08030 04e988bcdd8e40e584afeb10b3d6da5c 294 SUPERFAMILY SSF53328 86 282 1.03E-60 T 31-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DY252_08030 04e988bcdd8e40e584afeb10b3d6da5c 294 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 281 5.6E-102 T 31-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DY252_08030 04e988bcdd8e40e584afeb10b3d6da5c 294 Gene3D G3DSA:3.40.50.170 86 282 7.7E-69 T 31-10-2018 DY252_08030 04e988bcdd8e40e584afeb10b3d6da5c 294 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 281 47.53 T 31-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DY252_08030 04e988bcdd8e40e584afeb10b3d6da5c 294 SUPERFAMILY SSF55021 3 83 1.29E-18 T 31-10-2018 DY252_08030 04e988bcdd8e40e584afeb10b3d6da5c 294 PIRSF PIRSF036480 1 282 1.3E-113 T 31-10-2018 DY252_04045 5abf6661c86f33ec88f6c34bf4191904 290 SUPERFAMILY SSF103481 195 289 6.54E-12 T 31-10-2018 DY252_04045 5abf6661c86f33ec88f6c34bf4191904 290 Pfam PF00892 EamA-like transporter family 12 140 4.5E-16 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_04045 5abf6661c86f33ec88f6c34bf4191904 290 Pfam PF00892 EamA-like transporter family 153 287 5.7E-13 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_04045 5abf6661c86f33ec88f6c34bf4191904 290 SUPERFAMILY SSF103481 41 143 1.7E-13 T 31-10-2018 DY252_15840 4ec2f58e7067f19b0b9a1239c2e1c3c6 367 Gene3D G3DSA:3.40.50.2300 142 278 1.7E-65 T 31-10-2018 DY252_15840 4ec2f58e7067f19b0b9a1239c2e1c3c6 367 SUPERFAMILY SSF53822 25 366 8.48E-71 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_15840 4ec2f58e7067f19b0b9a1239c2e1c3c6 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 6.3E-6 T 31-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DY252_15840 4ec2f58e7067f19b0b9a1239c2e1c3c6 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 6.3E-6 T 31-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DY252_15840 4ec2f58e7067f19b0b9a1239c2e1c3c6 367 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 6.3E-6 T 31-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 DY252_15840 4ec2f58e7067f19b0b9a1239c2e1c3c6 367 Gene3D G3DSA:3.40.50.2300 29 344 1.7E-65 T 31-10-2018 DY252_15840 4ec2f58e7067f19b0b9a1239c2e1c3c6 367 Pfam PF13458 Periplasmic binding protein 25 362 8.5E-51 T 31-10-2018 IPR028081 Leucine-binding protein domain DY252_14670 48b1759a9b0b0ed447aa36affa7b3a9a 302 SUPERFAMILY SSF103481 187 285 5.36E-8 T 31-10-2018 DY252_14670 48b1759a9b0b0ed447aa36affa7b3a9a 302 SUPERFAMILY SSF103481 35 135 2.09E-15 T 31-10-2018 DY252_14670 48b1759a9b0b0ed447aa36affa7b3a9a 302 Pfam PF00892 EamA-like transporter family 149 284 7.0E-10 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_14670 48b1759a9b0b0ed447aa36affa7b3a9a 302 Pfam PF00892 EamA-like transporter family 3 134 5.1E-15 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_11015 f390ff1529445788a5611011488008dd 175 SUPERFAMILY SSF53271 2 171 1.1E-56 T 31-10-2018 IPR029057 Phosphoribosyltransferase-like DY252_11015 f390ff1529445788a5611011488008dd 175 Pfam PF00156 Phosphoribosyl transferase domain 29 152 2.5E-18 T 31-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DY252_11015 f390ff1529445788a5611011488008dd 175 Gene3D G3DSA:3.40.50.2020 1 175 2.3E-67 T 31-10-2018 DY252_11015 f390ff1529445788a5611011488008dd 175 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 172 37.065 T 31-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 DY252_11015 f390ff1529445788a5611011488008dd 175 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 171 3.0E-67 T 31-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 DY252_04715 d98b44994240ee260ece3ea266ab6de9 264 SUPERFAMILY SSF161098 9 256 2.35E-57 T 31-10-2018 IPR035906 MetI-like superfamily DY252_04715 d98b44994240ee260ece3ea266ab6de9 264 Gene3D G3DSA:1.10.3720.10 14 263 6.0E-53 T 31-10-2018 IPR035906 MetI-like superfamily DY252_04715 d98b44994240ee260ece3ea266ab6de9 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 261 4.7E-16 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_17805 b78842ea1567ee5b6a6a90a80bb5a7df 332 Pfam PF13353 4Fe-4S single cluster domain 21 112 9.4E-10 T 31-10-2018 DY252_17805 b78842ea1567ee5b6a6a90a80bb5a7df 332 SMART SM00729 14 218 1.2E-4 T 31-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DY252_17805 b78842ea1567ee5b6a6a90a80bb5a7df 332 Pfam PF04055 Radical SAM superfamily 18 180 4.6E-26 T 31-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DY252_17805 b78842ea1567ee5b6a6a90a80bb5a7df 332 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 332 2.7E-109 T 31-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DY252_17805 b78842ea1567ee5b6a6a90a80bb5a7df 332 Gene3D G3DSA:3.20.20.70 2 332 2.0E-81 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_17805 b78842ea1567ee5b6a6a90a80bb5a7df 332 Pfam PF06463 Molybdenum Cofactor Synthesis C 187 311 5.8E-36 T 31-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DY252_17805 b78842ea1567ee5b6a6a90a80bb5a7df 332 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 332 38.312 T 31-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DY252_17805 b78842ea1567ee5b6a6a90a80bb5a7df 332 SUPERFAMILY SSF102114 4 278 2.75E-73 T 31-10-2018 DY252_17805 b78842ea1567ee5b6a6a90a80bb5a7df 332 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 31-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DY252_00975 aeeefab5bc8bfc5aef48aa993c3de941 442 Pfam PF05977 Transmembrane secretion effector 43 426 1.1E-48 T 31-10-2018 IPR010290 Transmembrane secretion effector DY252_00975 aeeefab5bc8bfc5aef48aa993c3de941 442 SUPERFAMILY SSF103473 42 431 3.79E-42 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_00975 aeeefab5bc8bfc5aef48aa993c3de941 442 Gene3D G3DSA:1.20.1250.20 37 429 1.4E-33 T 31-10-2018 DY252_11260 c6b3386dac0f558987c05774a71824c1 486 SUPERFAMILY SSF53187 12 481 1.56E-54 T 31-10-2018 DY252_11260 c6b3386dac0f558987c05774a71824c1 486 PIRSF PIRSF016599 1 485 2.5E-174 T 31-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DY252_11260 c6b3386dac0f558987c05774a71824c1 486 Pfam PF01546 Peptidase family M20/M25/M40 72 480 5.4E-15 T 31-10-2018 IPR002933 Peptidase M20 GO:0016787 DY252_11260 c6b3386dac0f558987c05774a71824c1 486 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 7.6E-61 T 31-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DY252_11260 c6b3386dac0f558987c05774a71824c1 486 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 7.6E-61 T 31-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DY252_11260 c6b3386dac0f558987c05774a71824c1 486 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 7.6E-61 T 31-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DY252_11260 c6b3386dac0f558987c05774a71824c1 486 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 7.6E-61 T 31-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DY252_11260 c6b3386dac0f558987c05774a71824c1 486 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 7.6E-61 T 31-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DY252_11260 c6b3386dac0f558987c05774a71824c1 486 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 7.6E-61 T 31-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DY252_11260 c6b3386dac0f558987c05774a71824c1 486 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 7.6E-61 T 31-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DY252_11260 c6b3386dac0f558987c05774a71824c1 486 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 7.6E-61 T 31-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DY252_11260 c6b3386dac0f558987c05774a71824c1 486 Gene3D G3DSA:3.40.630.10 367 486 3.1E-23 T 31-10-2018 DY252_11260 c6b3386dac0f558987c05774a71824c1 486 Gene3D G3DSA:3.40.630.10 1 228 7.1E-54 T 31-10-2018 DY252_11260 c6b3386dac0f558987c05774a71824c1 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 9 482 4.2E-153 T 31-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DY252_11220 62a9e33cc7c728a8e6523771562e20be 339 Pfam PF00296 Luciferase-like monooxygenase 17 296 1.3E-34 T 31-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DY252_11220 62a9e33cc7c728a8e6523771562e20be 339 Gene3D G3DSA:3.20.20.30 1 329 1.4E-101 T 31-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DY252_11220 62a9e33cc7c728a8e6523771562e20be 339 SUPERFAMILY SSF51679 2 324 1.02E-84 T 31-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DY252_11220 62a9e33cc7c728a8e6523771562e20be 339 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 5 324 1.8E-134 T 31-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 DY252_15080 f49ceead48e8c3810562dadb4cd048f4 210 PIRSF PIRSF006386 1 204 9.3E-49 T 31-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 DY252_15080 f49ceead48e8c3810562dadb4cd048f4 210 SUPERFAMILY SSF52833 3 195 5.03E-40 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_15080 f49ceead48e8c3810562dadb4cd048f4 210 Pfam PF01323 DSBA-like thioredoxin domain 4 193 7.1E-36 T 31-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 DY252_15080 f49ceead48e8c3810562dadb4cd048f4 210 Gene3D G3DSA:3.40.30.10 3 200 5.8E-54 T 31-10-2018 DY252_11535 d3f1201b5af3cd98b53f629f5bcdca40 332 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 325 6.1E-29 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_11535 d3f1201b5af3cd98b53f629f5bcdca40 332 SUPERFAMILY SSF161098 97 308 3.6E-12 T 31-10-2018 IPR035906 MetI-like superfamily DY252_11535 d3f1201b5af3cd98b53f629f5bcdca40 332 Gene3D G3DSA:1.10.3720.10 84 326 9.8E-16 T 31-10-2018 IPR035906 MetI-like superfamily DY252_01230 2827035b7e9a4ff97440fe5fbcafbb15 154 Gene3D G3DSA:2.70.40.10 4 150 6.9E-55 T 31-10-2018 IPR036157 dUTPase-like superfamily DY252_01230 2827035b7e9a4ff97440fe5fbcafbb15 154 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 4 149 34.896 T 31-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 DY252_01230 2827035b7e9a4ff97440fe5fbcafbb15 154 Pfam PF00692 dUTPase 18 148 9.1E-33 T 31-10-2018 IPR029054 dUTPase-like DY252_01230 2827035b7e9a4ff97440fe5fbcafbb15 154 SUPERFAMILY SSF51283 1 149 1.44E-53 T 31-10-2018 IPR036157 dUTPase-like superfamily DY252_01230 2827035b7e9a4ff97440fe5fbcafbb15 154 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 148 1.9E-56 T 31-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 DY252_07040 92dd2ef058a23a7baecdc87e63b3ce5b 261 Gene3D G3DSA:3.40.190.10 31 247 2.1E-35 T 31-10-2018 DY252_07040 92dd2ef058a23a7baecdc87e63b3ce5b 261 Gene3D G3DSA:3.40.190.10 112 215 2.1E-35 T 31-10-2018 DY252_07040 92dd2ef058a23a7baecdc87e63b3ce5b 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 246 1.4E-34 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_07040 92dd2ef058a23a7baecdc87e63b3ce5b 261 SUPERFAMILY SSF53850 32 246 4.62E-42 T 31-10-2018 DY252_07040 92dd2ef058a23a7baecdc87e63b3ce5b 261 SMART SM00062 31 255 3.2E-14 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_02845 0f0c879b11d5cac7386930bc8a659b30 425 SUPERFAMILY SSF53335 32 273 1.34E-27 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_02845 0f0c879b11d5cac7386930bc8a659b30 425 Pfam PF08242 Methyltransferase domain 73 170 7.2E-15 T 31-10-2018 IPR013217 Methyltransferase type 12 DY252_21270 4d0f5b037f7f27be94101e325c85c32e 373 Gene3D G3DSA:1.10.443.10 184 368 1.4E-39 T 31-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DY252_21270 4d0f5b037f7f27be94101e325c85c32e 373 Pfam PF00589 Phage integrase family 186 353 4.2E-31 T 31-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DY252_21270 4d0f5b037f7f27be94101e325c85c32e 373 Gene3D G3DSA:1.10.150.130 59 183 2.2E-11 T 31-10-2018 IPR010998 Integrase/recombinase, N-terminal DY252_21270 4d0f5b037f7f27be94101e325c85c32e 373 SUPERFAMILY SSF56349 64 362 7.36E-60 T 31-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DY252_21590 ff7e8f429bcb63f9fc4feece03e3651a 195 Gene3D G3DSA:1.10.10.10 105 165 2.6E-8 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_21590 ff7e8f429bcb63f9fc4feece03e3651a 195 SUPERFAMILY SSF88659 105 162 7.41E-7 T 31-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DY252_21590 ff7e8f429bcb63f9fc4feece03e3651a 195 Gene3D G3DSA:1.10.1740.10 13 98 7.9E-8 T 31-10-2018 DY252_21590 ff7e8f429bcb63f9fc4feece03e3651a 195 Pfam PF04542 Sigma-70 region 2 15 78 6.7E-7 T 31-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DY252_21590 ff7e8f429bcb63f9fc4feece03e3651a 195 SUPERFAMILY SSF88946 13 86 4.32E-11 T 31-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DY252_17450 0b78a5177c23f999c82189a5f165afdd 108 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 8 107 2.0E-17 T 31-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DY252_17450 0b78a5177c23f999c82189a5f165afdd 108 Pfam PF02049 Flagellar hook-basal body complex protein FliE 29 108 4.5E-22 T 31-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DY252_17450 0b78a5177c23f999c82189a5f165afdd 108 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 7 108 15.597 T 31-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DY252_17450 0b78a5177c23f999c82189a5f165afdd 108 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 39 55 9.2E-8 T 31-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DY252_17450 0b78a5177c23f999c82189a5f165afdd 108 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 93 106 9.2E-8 T 31-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DY252_17450 0b78a5177c23f999c82189a5f165afdd 108 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 72 88 9.2E-8 T 31-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DY252_12215 80d27abee2b0345ec3a4a9e1205a6ab4 449 Pfam PF13450 NAD(P)-binding Rossmann-like domain 11 38 5.1E-5 T 31-10-2018 DY252_12215 80d27abee2b0345ec3a4a9e1205a6ab4 449 SUPERFAMILY SSF51905 11 424 1.79E-16 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_12215 80d27abee2b0345ec3a4a9e1205a6ab4 449 Gene3D G3DSA:3.50.50.60 9 60 5.1E-6 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_03330 44be25e8c099ed1cb3cdab753b807ee1 60 Gene3D G3DSA:3.30.160.160 11 51 2.3E-11 T 31-10-2018 DY252_03330 44be25e8c099ed1cb3cdab753b807ee1 60 Pfam PF07411 Domain of unknown function (DUF1508) 18 46 1.1E-6 T 31-10-2018 IPR010879 Domain of unknown function DUF1508 DY252_03330 44be25e8c099ed1cb3cdab753b807ee1 60 SUPERFAMILY SSF160113 12 49 7.46E-8 T 31-10-2018 IPR036913 YegP-like superfamily DY252_04590 ba4a4cf3dbc23a89eb1cf7ebda4181fa 207 Hamap MF_00052_B Ribonuclease HII [rnhB]. 13 196 35.819 T 31-10-2018 IPR022898 Ribonuclease HII GO:0004523 DY252_04590 ba4a4cf3dbc23a89eb1cf7ebda4181fa 207 SUPERFAMILY SSF53098 11 201 7.44E-64 T 31-10-2018 IPR012337 Ribonuclease H-like superfamily DY252_04590 ba4a4cf3dbc23a89eb1cf7ebda4181fa 207 Gene3D G3DSA:3.30.420.10 3 206 4.2E-71 T 31-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DY252_04590 ba4a4cf3dbc23a89eb1cf7ebda4181fa 207 Pfam PF01351 Ribonuclease HII 15 195 8.6E-40 T 31-10-2018 IPR024567 Ribonuclease HII/HIII domain DY252_16265 5fdf5fb65a388dbde3fdbae0cc9ebeb6 311 Gene3D G3DSA:3.40.50.1980 43 131 4.6E-23 T 31-10-2018 DY252_16265 5fdf5fb65a388dbde3fdbae0cc9ebeb6 311 Gene3D G3DSA:3.40.50.1980 135 307 5.6E-45 T 31-10-2018 DY252_16265 5fdf5fb65a388dbde3fdbae0cc9ebeb6 311 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 286 299 1.0E-9 T 31-10-2018 DY252_16265 5fdf5fb65a388dbde3fdbae0cc9ebeb6 311 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 96 111 1.0E-9 T 31-10-2018 DY252_16265 5fdf5fb65a388dbde3fdbae0cc9ebeb6 311 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 221 239 1.0E-9 T 31-10-2018 DY252_16265 5fdf5fb65a388dbde3fdbae0cc9ebeb6 311 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 65 83 1.0E-9 T 31-10-2018 DY252_16265 5fdf5fb65a388dbde3fdbae0cc9ebeb6 311 SUPERFAMILY SSF53807 44 304 2.0E-48 T 31-10-2018 DY252_16265 5fdf5fb65a388dbde3fdbae0cc9ebeb6 311 Pfam PF01497 Periplasmic binding protein 48 283 7.1E-28 T 31-10-2018 IPR002491 ABC transporter periplasmic binding domain DY252_05310 d01810d04a5b9cd7254bdd2d72c91fea 276 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 31-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DY252_05310 d01810d04a5b9cd7254bdd2d72c91fea 276 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 10 257 2.2E-80 T 31-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DY252_05310 d01810d04a5b9cd7254bdd2d72c91fea 276 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 7 262 19.807 T 31-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DY252_05310 d01810d04a5b9cd7254bdd2d72c91fea 276 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 263 2.7E-79 T 31-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DY252_13365 f028db21fc3631c371fc0ebd58d2a959 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 10 240 5.0E-101 T 31-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 DY252_13365 f028db21fc3631c371fc0ebd58d2a959 243 SUPERFAMILY SSF53633 8 240 6.94E-71 T 31-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DY252_13365 f028db21fc3631c371fc0ebd58d2a959 243 Pfam PF00696 Amino acid kinase family 11 219 2.2E-28 T 31-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DY252_13365 f028db21fc3631c371fc0ebd58d2a959 243 PIRSF PIRSF005650 4 243 1.5E-94 T 31-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 DY252_13365 f028db21fc3631c371fc0ebd58d2a959 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.973 T 31-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 DY252_13365 f028db21fc3631c371fc0ebd58d2a959 243 Gene3D G3DSA:3.40.1160.10 4 242 1.5E-77 T 31-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DY252_13750 ce56c2159e9ef97e525835dfbbdc4bfb 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 31-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DY252_13750 ce56c2159e9ef97e525835dfbbdc4bfb 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 31-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DY252_13750 ce56c2159e9ef97e525835dfbbdc4bfb 485 SUPERFAMILY SSF53720 3 480 1.31E-171 T 31-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DY252_13750 ce56c2159e9ef97e525835dfbbdc4bfb 485 Gene3D G3DSA:3.40.605.10 2 249 1.5E-93 T 31-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_13750 ce56c2159e9ef97e525835dfbbdc4bfb 485 Pfam PF00171 Aldehyde dehydrogenase family 20 474 9.5E-181 T 31-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DY252_13750 ce56c2159e9ef97e525835dfbbdc4bfb 485 Gene3D G3DSA:3.40.309.10 250 484 6.0E-88 T 31-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DY252_19065 4ded2765b7e1e2aa1e6eeb3509f65021 295 SUPERFAMILY SSF46785 1 110 1.08E-20 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_19065 4ded2765b7e1e2aa1e6eeb3509f65021 295 Gene3D G3DSA:3.40.190.290 90 284 3.9E-28 T 31-10-2018 DY252_19065 4ded2765b7e1e2aa1e6eeb3509f65021 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.5E-17 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_19065 4ded2765b7e1e2aa1e6eeb3509f65021 295 Gene3D G3DSA:1.10.10.10 2 86 1.4E-18 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_19065 4ded2765b7e1e2aa1e6eeb3509f65021 295 SUPERFAMILY SSF53850 89 287 4.34E-33 T 31-10-2018 DY252_19065 4ded2765b7e1e2aa1e6eeb3509f65021 295 Pfam PF03466 LysR substrate binding domain 87 284 1.0E-29 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_04120 eedba9a6754948a55c2766b9b1e14c66 186 SUPERFAMILY SSF52833 32 182 9.32E-35 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_04120 eedba9a6754948a55c2766b9b1e14c66 186 Gene3D G3DSA:3.40.30.10 20 186 6.8E-39 T 31-10-2018 DY252_04120 eedba9a6754948a55c2766b9b1e14c66 186 Pfam PF00578 AhpC/TSA family 52 160 2.4E-17 T 31-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DY252_04120 eedba9a6754948a55c2766b9b1e14c66 186 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 31-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DY252_21020 3e7108780c1c7d2be5112d6e04d68318 651 Gene3D G3DSA:3.40.50.300 1 243 1.2E-5 T 31-10-2018 DY252_21020 3e7108780c1c7d2be5112d6e04d68318 651 SUPERFAMILY SSF52540 1 564 4.25E-9 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_21020 3e7108780c1c7d2be5112d6e04d68318 651 Gene3D G3DSA:3.40.50.300 256 623 6.2E-6 T 31-10-2018 DY252_21020 3e7108780c1c7d2be5112d6e04d68318 651 Pfam PF12532 Protein of unknown function (DUF3732) 459 637 2.0E-49 T 31-10-2018 IPR022205 Protein of unknown function DUF3732 DY252_12295 536ddd4f88991b0e2936e9094b03bddb 142 Pfam PF00293 NUDIX domain 21 136 3.2E-12 T 31-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DY252_12295 536ddd4f88991b0e2936e9094b03bddb 142 Gene3D G3DSA:3.90.79.10 3 141 1.3E-26 T 31-10-2018 DY252_12295 536ddd4f88991b0e2936e9094b03bddb 142 ProSitePatterns PS00893 Nudix box signature. 46 67 - T 31-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DY252_12295 536ddd4f88991b0e2936e9094b03bddb 142 SUPERFAMILY SSF55811 12 139 7.04E-22 T 31-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DY252_19155 645922fd205375a59aee3311a73376b0 409 Pfam PF00144 Beta-lactamase 107 397 1.8E-40 T 31-10-2018 IPR001466 Beta-lactamase-related DY252_19155 645922fd205375a59aee3311a73376b0 409 Gene3D G3DSA:3.40.710.10 100 386 5.0E-99 T 31-10-2018 DY252_19155 645922fd205375a59aee3311a73376b0 409 SUPERFAMILY SSF56601 35 393 4.28E-90 T 31-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DY252_19155 645922fd205375a59aee3311a73376b0 409 Gene3D G3DSA:1.20.58.710 153 256 5.0E-99 T 31-10-2018 DY252_13320 c5bd35369a1671140de08b3a5e5c52ee 149 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 7 146 3.8E-58 T 31-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DY252_13320 c5bd35369a1671140de08b3a5e5c52ee 149 Pfam PF07977 FabA-like domain 16 140 3.9E-37 T 31-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DY252_13320 c5bd35369a1671140de08b3a5e5c52ee 149 Gene3D G3DSA:3.10.129.10 1 149 4.4E-61 T 31-10-2018 DY252_13320 c5bd35369a1671140de08b3a5e5c52ee 149 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 7 148 34.427 T 31-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DY252_13320 c5bd35369a1671140de08b3a5e5c52ee 149 SUPERFAMILY SSF54637 6 147 4.98E-49 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_12210 16cf228d94976918cc470bc0e02ceb1b 126 Gene3D G3DSA:3.40.1230.10 11 126 7.0E-40 T 31-10-2018 IPR036748 MTH938-like superfamily DY252_12210 16cf228d94976918cc470bc0e02ceb1b 126 SUPERFAMILY SSF64076 5 125 5.76E-39 T 31-10-2018 IPR036748 MTH938-like superfamily DY252_12210 16cf228d94976918cc470bc0e02ceb1b 126 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 16 124 7.2E-32 T 31-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein DY252_16890 8394d6d297be9dc1de02695546e7a911 162 ProSitePatterns PS00018 EF-hand calcium-binding domain. 147 159 - T 31-10-2018 IPR018247 EF-Hand 1, calcium-binding site DY252_16890 8394d6d297be9dc1de02695546e7a911 162 Gene3D G3DSA:1.10.238.10 115 162 1.3E-10 T 31-10-2018 DY252_16890 8394d6d297be9dc1de02695546e7a911 162 Pfam PF13202 EF hand 141 161 2.2E-4 T 31-10-2018 IPR002048 EF-hand domain GO:0005509 DY252_16890 8394d6d297be9dc1de02695546e7a911 162 Pfam PF13202 EF hand 121 138 2.8E-4 T 31-10-2018 IPR002048 EF-hand domain GO:0005509 DY252_16890 8394d6d297be9dc1de02695546e7a911 162 SUPERFAMILY SSF47473 116 161 1.56E-10 T 31-10-2018 IPR011992 EF-hand domain pair DY252_05615 351922d0d3dc21ae8893632b0d842350 133 SMART SM00530 69 124 3.8E-10 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_05615 351922d0d3dc21ae8893632b0d842350 133 Pfam PF12844 Helix-turn-helix domain 71 127 2.5E-10 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_05615 351922d0d3dc21ae8893632b0d842350 133 Gene3D G3DSA:1.10.260.40 69 126 3.4E-14 T 31-10-2018 DY252_05615 351922d0d3dc21ae8893632b0d842350 133 SUPERFAMILY SSF47413 70 127 5.9E-14 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_20385 e80824e4cc836f9d706381a67dcae85b 148 Pfam PF12680 SnoaL-like domain 17 111 4.8E-12 T 31-10-2018 IPR037401 SnoaL-like domain DY252_20385 e80824e4cc836f9d706381a67dcae85b 148 SUPERFAMILY SSF54427 10 129 1.26E-17 T 31-10-2018 IPR032710 NTF2-like domain superfamily DY252_20385 e80824e4cc836f9d706381a67dcae85b 148 Gene3D G3DSA:3.10.450.50 5 124 2.1E-15 T 31-10-2018 DY252_14825 69125ea88a2d3929df2ecd4a8c572791 340 SUPERFAMILY SSF51735 144 308 2.7E-45 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_14825 69125ea88a2d3929df2ecd4a8c572791 340 SMART SM00829 14 338 2.2E-7 T 31-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DY252_14825 69125ea88a2d3929df2ecd4a8c572791 340 Gene3D G3DSA:3.90.180.10 9 331 3.1E-132 T 31-10-2018 DY252_14825 69125ea88a2d3929df2ecd4a8c572791 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 31-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DY252_14825 69125ea88a2d3929df2ecd4a8c572791 340 SUPERFAMILY SSF50129 1 184 2.59E-54 T 31-10-2018 IPR011032 GroES-like superfamily DY252_14825 69125ea88a2d3929df2ecd4a8c572791 340 Gene3D G3DSA:3.40.50.720 152 289 3.1E-132 T 31-10-2018 DY252_14825 69125ea88a2d3929df2ecd4a8c572791 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 135 1.4E-32 T 31-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DY252_14825 69125ea88a2d3929df2ecd4a8c572791 340 Pfam PF00107 Zinc-binding dehydrogenase 179 303 3.7E-32 T 31-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DY252_21265 1839ac153d19610217b5d20006992af3 581 Pfam PF00239 Resolvase, N terminal domain 3 143 1.1E-26 T 31-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DY252_21265 1839ac153d19610217b5d20006992af3 581 Pfam PF07508 Recombinase 171 282 1.6E-22 T 31-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 DY252_21265 1839ac153d19610217b5d20006992af3 581 Gene3D G3DSA:3.40.50.1390 1 123 6.2E-27 T 31-10-2018 DY252_21265 1839ac153d19610217b5d20006992af3 581 SUPERFAMILY SSF53041 1 143 1.05E-26 T 31-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 DY252_21265 1839ac153d19610217b5d20006992af3 581 SMART SM00857 3 144 2.2E-39 T 31-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DY252_21265 1839ac153d19610217b5d20006992af3 581 Gene3D G3DSA:1.10.10.2600 128 285 2.0E-14 T 31-10-2018 IPR038109 DNA-binding recombinase domain superfamily DY252_21265 1839ac153d19610217b5d20006992af3 581 Pfam PF13408 Recombinase zinc beta ribbon domain 307 358 2.7E-8 T 31-10-2018 IPR025827 Recombinase zinc beta ribbon domain DY252_05005 df8368fa5831148bfcb6aa9d5c35890a 332 Pfam PF02719 Polysaccharide biosynthesis protein 7 271 5.4E-87 T 31-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain DY252_05005 df8368fa5831148bfcb6aa9d5c35890a 332 Gene3D G3DSA:3.40.50.720 5 290 9.1E-104 T 31-10-2018 DY252_05005 df8368fa5831148bfcb6aa9d5c35890a 332 Gene3D G3DSA:3.90.25.30 167 260 9.1E-104 T 31-10-2018 DY252_05005 df8368fa5831148bfcb6aa9d5c35890a 332 SUPERFAMILY SSF51735 2 244 3.14E-55 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_10460 48f058602344cea5ab7bf0e523e0f66f 276 Pfam PF00149 Calcineurin-like phosphoesterase 2 200 3.2E-17 T 31-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DY252_10460 48f058602344cea5ab7bf0e523e0f66f 276 SUPERFAMILY SSF56300 1 255 7.6E-58 T 31-10-2018 DY252_10460 48f058602344cea5ab7bf0e523e0f66f 276 Gene3D G3DSA:3.60.21.40 1 242 2.3E-88 T 31-10-2018 DY252_10460 48f058602344cea5ab7bf0e523e0f66f 276 Gene3D G3DSA:3.30.750.180 105 233 2.3E-88 T 31-10-2018 DY252_10460 48f058602344cea5ab7bf0e523e0f66f 276 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 258 37.423 T 31-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 DY252_07190 cdcb3a4b45135be80fc5cee412c2732d 255 Pfam PF00156 Phosphoribosyl transferase domain 158 251 2.5E-8 T 31-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DY252_07190 cdcb3a4b45135be80fc5cee412c2732d 255 Gene3D G3DSA:3.40.50.2020 91 254 4.6E-18 T 31-10-2018 DY252_07190 cdcb3a4b45135be80fc5cee412c2732d 255 SUPERFAMILY SSF53271 73 253 2.05E-27 T 31-10-2018 IPR029057 Phosphoribosyltransferase-like DY252_21060 2b03f873cb90abe901e71c65d23f7a30 180 Pfam PF10502 Signal peptidase, peptidase S26 28 165 7.5E-54 T 31-10-2018 IPR019533 Peptidase S26 DY252_21060 2b03f873cb90abe901e71c65d23f7a30 180 Gene3D G3DSA:2.10.109.10 64 167 2.9E-9 T 31-10-2018 DY252_21060 2b03f873cb90abe901e71c65d23f7a30 180 SUPERFAMILY SSF51306 30 176 9.94E-29 T 31-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DY252_18460 08604407393f676dce6fcaa66a84c932 973 SUPERFAMILY SSF52540 13 120 1.82E-8 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18460 08604407393f676dce6fcaa66a84c932 973 SMART SM00490 181 270 1.8E-9 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_18460 08604407393f676dce6fcaa66a84c932 973 Gene3D G3DSA:3.40.50.300 151 295 1.7E-31 T 31-10-2018 DY252_18460 08604407393f676dce6fcaa66a84c932 973 Gene3D G3DSA:3.40.50.300 2 150 2.5E-30 T 31-10-2018 DY252_18460 08604407393f676dce6fcaa66a84c932 973 Pfam PF00271 Helicase conserved C-terminal domain 169 269 7.5E-9 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_18460 08604407393f676dce6fcaa66a84c932 973 SUPERFAMILY SSF52540 145 413 4.9E-36 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_14435 cb412f1431894b2624dac21223ac71e0 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 8.3E-14 T 31-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DY252_14435 cb412f1431894b2624dac21223ac71e0 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 55 67 8.3E-14 T 31-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DY252_14435 cb412f1431894b2624dac21223ac71e0 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 8.3E-14 T 31-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DY252_14435 cb412f1431894b2624dac21223ac71e0 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 29 44 8.3E-14 T 31-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DY252_14435 cb412f1431894b2624dac21223ac71e0 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 121 8.3E-14 T 31-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DY252_14435 cb412f1431894b2624dac21223ac71e0 167 PIRSF PIRSF001467 5 167 1.8E-35 T 31-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 DY252_14435 cb412f1431894b2624dac21223ac71e0 167 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 18 162 2.6E-47 T 31-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DY252_14435 cb412f1431894b2624dac21223ac71e0 167 Gene3D G3DSA:2.40.100.10 2 166 1.4E-51 T 31-10-2018 IPR029000 Cyclophilin-like domain superfamily DY252_14435 cb412f1431894b2624dac21223ac71e0 167 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 50 67 - T 31-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 DY252_14435 cb412f1431894b2624dac21223ac71e0 167 SUPERFAMILY SSF50891 13 164 3.07E-51 T 31-10-2018 IPR029000 Cyclophilin-like domain superfamily DY252_02775 a6d158da58ce80254f2f9831d51f32ff 220 Pfam PF13460 NAD(P)H-binding 7 197 9.2E-21 T 31-10-2018 IPR016040 NAD(P)-binding domain DY252_02775 a6d158da58ce80254f2f9831d51f32ff 220 SUPERFAMILY SSF51735 1 213 5.82E-24 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_02775 a6d158da58ce80254f2f9831d51f32ff 220 Gene3D G3DSA:3.40.50.720 2 217 9.9E-38 T 31-10-2018 DY252_07095 db2f44b24276faa054f2e52bd91f3144 206 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 28 198 6.0E-32 T 31-10-2018 IPR005247 YbhB/YbcL DY252_07095 db2f44b24276faa054f2e52bd91f3144 206 Gene3D G3DSA:3.90.280.10 5 204 2.1E-50 T 31-10-2018 IPR036610 PEBP-like superfamily DY252_07095 db2f44b24276faa054f2e52bd91f3144 206 SUPERFAMILY SSF49777 1 204 1.44E-42 T 31-10-2018 IPR036610 PEBP-like superfamily DY252_07095 db2f44b24276faa054f2e52bd91f3144 206 Pfam PF01161 Phosphatidylethanolamine-binding protein 27 200 1.8E-39 T 31-10-2018 IPR008914 Phosphatidylethanolamine-binding protein DY252_03925 11eef0cb714f32b7bc3b7677bb2dbcb5 422 Pfam PF01565 FAD binding domain 4 141 5.5E-17 T 31-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DY252_03925 11eef0cb714f32b7bc3b7677bb2dbcb5 422 SUPERFAMILY SSF55103 189 414 8.18E-25 T 31-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DY252_03925 11eef0cb714f32b7bc3b7677bb2dbcb5 422 SUPERFAMILY SSF56176 4 184 1.12E-32 T 31-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DY252_03925 11eef0cb714f32b7bc3b7677bb2dbcb5 422 Gene3D G3DSA:1.10.45.10 377 416 2.6E-6 T 31-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DY252_03925 11eef0cb714f32b7bc3b7677bb2dbcb5 422 Gene3D G3DSA:3.30.465.40 3 199 5.7E-30 T 31-10-2018 DY252_21630 5df80c8185e29af09011549b4943bc06 257 SUPERFAMILY SSF53335 25 254 1.72E-47 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_21630 5df80c8185e29af09011549b4943bc06 257 Pfam PF01209 ubiE/COQ5 methyltransferase family 29 255 7.5E-87 T 31-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DY252_21630 5df80c8185e29af09011549b4943bc06 257 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 33 255 3.1E-85 T 31-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DY252_21630 5df80c8185e29af09011549b4943bc06 257 Gene3D G3DSA:3.40.50.150 39 257 2.6E-78 T 31-10-2018 DY252_21630 5df80c8185e29af09011549b4943bc06 257 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 44 59 - T 31-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 DY252_21630 5df80c8185e29af09011549b4943bc06 257 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 164 178 - T 31-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 DY252_21630 5df80c8185e29af09011549b4943bc06 257 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 24 256 38.475 T 31-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DY252_01935 90361f934c7d9c3a984002ab153d94fd 321 Pfam PF13371 Tetratricopeptide repeat 202 273 2.3E-11 T 31-10-2018 DY252_01935 90361f934c7d9c3a984002ab153d94fd 321 SUPERFAMILY SSF48452 197 273 5.48E-8 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_01935 90361f934c7d9c3a984002ab153d94fd 321 Pfam PF13369 Transglutaminase-like superfamily 29 199 4.8E-36 T 31-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DY252_01935 90361f934c7d9c3a984002ab153d94fd 321 Gene3D G3DSA:1.25.40.10 177 307 2.1E-5 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_11685 1ff210d36307e40f33812a087c3ef480 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 23.409 T 31-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 DY252_11685 1ff210d36307e40f33812a087c3ef480 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 96 1.3E-26 T 31-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 DY252_11685 1ff210d36307e40f33812a087c3ef480 96 Gene3D G3DSA:1.10.20.60 2 94 4.8E-26 T 31-10-2018 DY252_11685 1ff210d36307e40f33812a087c3ef480 96 SUPERFAMILY SSF141000 3 94 1.83E-28 T 31-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 DY252_11685 1ff210d36307e40f33812a087c3ef480 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 21 91 9.4E-20 T 31-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 DY252_19880 a0a164f0777e1e05c453da588bf56cdf 194 Gene3D G3DSA:2.60.120.10 12 136 3.8E-22 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_19880 a0a164f0777e1e05c453da588bf56cdf 194 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 31 47 - T 31-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site DY252_19880 a0a164f0777e1e05c453da588bf56cdf 194 SUPERFAMILY SSF51206 16 121 9.43E-19 T 31-10-2018 IPR018490 Cyclic nucleotide-binding-like DY252_19880 a0a164f0777e1e05c453da588bf56cdf 194 Pfam PF00027 Cyclic nucleotide-binding domain 26 110 5.9E-9 T 31-10-2018 IPR000595 Cyclic nucleotide-binding domain DY252_09080 523bfbc9b7016f26f798aa851e2c8216 122 PIRSF PIRSF002134 1 122 8.7E-45 T 31-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09080 523bfbc9b7016f26f798aa851e2c8216 122 Gene3D G3DSA:1.10.8.50 1 72 5.0E-28 T 31-10-2018 DY252_09080 523bfbc9b7016f26f798aa851e2c8216 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.039 T 31-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09080 523bfbc9b7016f26f798aa851e2c8216 122 Gene3D G3DSA:4.10.910.10 73 119 2.1E-26 T 31-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09080 523bfbc9b7016f26f798aa851e2c8216 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 3.5E-53 T 31-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_09080 523bfbc9b7016f26f798aa851e2c8216 122 SUPERFAMILY SSF46946 2 121 6.56E-46 T 31-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DY252_09080 523bfbc9b7016f26f798aa851e2c8216 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 31-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09080 523bfbc9b7016f26f798aa851e2c8216 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 4.0E-32 T 31-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_13390 6e9a8a9f96ed07ea461d1d5118b9a476 416 Pfam PF12704 MacB-like periplasmic core domain 29 242 1.9E-16 T 31-10-2018 IPR025857 MacB-like periplasmic core domain DY252_13390 6e9a8a9f96ed07ea461d1d5118b9a476 416 Pfam PF02687 FtsX-like permease family 302 409 5.4E-12 T 31-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DY252_13390 6e9a8a9f96ed07ea461d1d5118b9a476 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 416 2.2E-149 T 31-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 DY252_08340 c4c63f11fa4799cda799e71e56dc1212 477 SMART SM00065 31 201 0.0089 T 31-10-2018 IPR003018 GAF domain GO:0005515 DY252_08340 c4c63f11fa4799cda799e71e56dc1212 477 Gene3D G3DSA:1.10.287.950 194 476 2.1E-39 T 31-10-2018 DY252_08340 c4c63f11fa4799cda799e71e56dc1212 477 Pfam PF13185 GAF domain 45 192 1.8E-13 T 31-10-2018 IPR003018 GAF domain GO:0005515 DY252_08340 c4c63f11fa4799cda799e71e56dc1212 477 SUPERFAMILY SSF58104 205 468 2.18E-39 T 31-10-2018 DY252_08340 c4c63f11fa4799cda799e71e56dc1212 477 Gene3D G3DSA:3.30.450.40 21 193 1.3E-18 T 31-10-2018 IPR029016 GAF-like domain superfamily DY252_08340 c4c63f11fa4799cda799e71e56dc1212 477 SMART SM00283 210 471 1.6E-15 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_08340 c4c63f11fa4799cda799e71e56dc1212 477 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 282 445 7.2E-22 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_08340 c4c63f11fa4799cda799e71e56dc1212 477 SUPERFAMILY SSF55781 28 196 5.02E-16 T 31-10-2018 DY252_09855 f4c23d3c600a93cd43a514286f2b0da3 142 Gene3D G3DSA:3.30.428.10 1 141 1.9E-39 T 31-10-2018 IPR036265 HIT-like superfamily DY252_09855 f4c23d3c600a93cd43a514286f2b0da3 142 PIRSF PIRSF000714 4 142 2.0E-47 T 31-10-2018 IPR026026 Histidine triad hydrolase, Hint-type DY252_09855 f4c23d3c600a93cd43a514286f2b0da3 142 Pfam PF01230 HIT domain 13 101 4.7E-14 T 31-10-2018 IPR001310 Histidine triad (HIT) protein DY252_09855 f4c23d3c600a93cd43a514286f2b0da3 142 SUPERFAMILY SSF54197 4 135 7.66E-33 T 31-10-2018 IPR036265 HIT-like superfamily DY252_11905 fd7343adcb16f748aea106fcb87f2403 214 Gene3D G3DSA:3.30.1060.10 7 214 1.7E-90 T 31-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DY252_11905 fd7343adcb16f748aea106fcb87f2403 214 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 47 208 37.474 T 31-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DY252_11905 fd7343adcb16f748aea106fcb87f2403 214 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 48 202 1.3E-65 T 31-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DY252_11905 fd7343adcb16f748aea106fcb87f2403 214 Pfam PF01625 Peptide methionine sulfoxide reductase 50 202 7.3E-66 T 31-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DY252_11905 fd7343adcb16f748aea106fcb87f2403 214 SUPERFAMILY SSF55068 10 212 1.28E-78 T 31-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DY252_09075 b9aadad79c7be23dc78f5b0511f17328 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 31-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DY252_09075 b9aadad79c7be23dc78f5b0511f17328 214 Pfam PF05191 Adenylate kinase, active site lid 127 163 2.3E-12 T 31-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DY252_09075 b9aadad79c7be23dc78f5b0511f17328 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 50.195 T 31-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DY252_09075 b9aadad79c7be23dc78f5b0511f17328 214 SUPERFAMILY SSF52540 1 213 3.34E-40 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_09075 b9aadad79c7be23dc78f5b0511f17328 214 Gene3D G3DSA:3.40.50.300 1 214 1.0E-76 T 31-10-2018 DY252_09075 b9aadad79c7be23dc78f5b0511f17328 214 Pfam PF00406 Adenylate kinase 5 191 1.6E-58 T 31-10-2018 DY252_09075 b9aadad79c7be23dc78f5b0511f17328 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 2.4E-79 T 31-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DY252_09075 b9aadad79c7be23dc78f5b0511f17328 214 PRINTS PR00094 Adenylate kinase signature 4 17 3.4E-37 T 31-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DY252_09075 b9aadad79c7be23dc78f5b0511f17328 214 PRINTS PR00094 Adenylate kinase signature 161 176 3.4E-37 T 31-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DY252_09075 b9aadad79c7be23dc78f5b0511f17328 214 PRINTS PR00094 Adenylate kinase signature 32 46 3.4E-37 T 31-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DY252_09075 b9aadad79c7be23dc78f5b0511f17328 214 PRINTS PR00094 Adenylate kinase signature 81 97 3.4E-37 T 31-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DY252_09075 b9aadad79c7be23dc78f5b0511f17328 214 PRINTS PR00094 Adenylate kinase signature 178 192 3.4E-37 T 31-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DY252_08145 bf431de4234f7f4f8b4a9097bb19bb91 403 Pfam PF04143 Sulphur transport 60 388 4.4E-78 T 31-10-2018 IPR007272 Sulphur transport domain DY252_08010 2eaee681088f00853a0bd249697059b5 414 Pfam PF02653 Branched-chain amino acid transport system / permease component 34 399 9.0E-41 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_09010 aa0ebd0d55df96c1a953706dc1de6418 66 Pfam PF00831 Ribosomal L29 protein 5 58 2.3E-24 T 31-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09010 aa0ebd0d55df96c1a953706dc1de6418 66 Gene3D G3DSA:1.10.287.310 1 63 9.0E-28 T 31-10-2018 DY252_09010 aa0ebd0d55df96c1a953706dc1de6418 66 SUPERFAMILY SSF46561 1 61 2.09E-21 T 31-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09010 aa0ebd0d55df96c1a953706dc1de6418 66 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 31-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09010 aa0ebd0d55df96c1a953706dc1de6418 66 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 57 2.6E-22 T 31-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_09010 aa0ebd0d55df96c1a953706dc1de6418 66 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.157 T 31-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DY252_15055 0ef5f90286cf0cb9b67941d2f1747447 77 Gene3D G3DSA:1.10.10.1100 1 54 3.7E-14 T 31-10-2018 DY252_15055 0ef5f90286cf0cb9b67941d2f1747447 77 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 46 4.5E-8 T 31-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DY252_12670 3b82f5187ea4003f81f1e689f1ec0522 153 SUPERFAMILY SSF46626 7 152 9.17E-28 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_12670 3b82f5187ea4003f81f1e689f1ec0522 153 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 60 151 6.9E-25 T 31-10-2018 IPR030999 Sulfur oxidation c-type cytochrome SoxX DY252_12670 3b82f5187ea4003f81f1e689f1ec0522 153 Pfam PF00034 Cytochrome c 49 152 1.2E-11 T 31-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_12670 3b82f5187ea4003f81f1e689f1ec0522 153 Gene3D G3DSA:1.10.760.10 23 153 9.4E-47 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_13765 12de3d156a07868c9bbe3b4580624db6 282 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 6 272 8.2E-129 T 31-10-2018 IPR017784 ABC transporter, choline, permease protein DY252_13765 12de3d156a07868c9bbe3b4580624db6 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 268 7.0E-25 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_13765 12de3d156a07868c9bbe3b4580624db6 282 Gene3D G3DSA:1.10.3720.10 86 274 8.7E-35 T 31-10-2018 IPR035906 MetI-like superfamily DY252_13765 12de3d156a07868c9bbe3b4580624db6 282 SUPERFAMILY SSF161098 88 274 1.44E-40 T 31-10-2018 IPR035906 MetI-like superfamily DY252_21840 768543502a12eb1898e7d65071120c9d 311 Pfam PF03445 Putative nucleotidyltransferase DUF294 12 72 3.1E-5 T 31-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 DY252_21840 768543502a12eb1898e7d65071120c9d 311 SUPERFAMILY SSF81301 16 61 2.35E-5 T 31-10-2018 DY252_11140 2fc2ab0216b5a75c8b003664334b8a27 158 Gene3D G3DSA:3.30.1490.190 101 157 1.9E-15 T 31-10-2018 DY252_11140 2fc2ab0216b5a75c8b003664334b8a27 158 SUPERFAMILY SSF46785 22 154 8.04E-32 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_11140 2fc2ab0216b5a75c8b003664334b8a27 158 Gene3D G3DSA:1.10.10.10 12 99 2.8E-33 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_11140 2fc2ab0216b5a75c8b003664334b8a27 158 Pfam PF01475 Ferric uptake regulator family 31 148 2.6E-16 T 31-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DY252_04275 2a3729c39cfa67f590c02400401f6bb6 303 Pfam PF04344 Chemotaxis phosphatase, CheZ 210 302 8.7E-9 T 31-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 DY252_04275 2a3729c39cfa67f590c02400401f6bb6 303 SUPERFAMILY SSF75708 133 303 2.75E-39 T 31-10-2018 DY252_04275 2a3729c39cfa67f590c02400401f6bb6 303 Gene3D G3DSA:1.10.287.500 206 255 7.7E-6 T 31-10-2018 DY252_08285 7842198dd5ad3992209ae936859b0140 185 Pfam PF00578 AhpC/TSA family 10 143 5.6E-15 T 31-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DY252_08285 7842198dd5ad3992209ae936859b0140 185 SUPERFAMILY SSF52833 5 174 1.16E-29 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_08285 7842198dd5ad3992209ae936859b0140 185 Gene3D G3DSA:3.40.30.10 3 169 1.8E-20 T 31-10-2018 DY252_18290 2f3eb0278ee346ed67ccf6eb069e3baa 535 SUPERFAMILY SSF74650 47 418 2.01E-147 T 31-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DY252_18290 2f3eb0278ee346ed67ccf6eb069e3baa 535 Gene3D G3DSA:2.70.98.10 46 418 1.4E-152 T 31-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DY252_18290 2f3eb0278ee346ed67ccf6eb069e3baa 535 SUPERFAMILY SSF81296 421 527 1.96E-25 T 31-10-2018 IPR014756 Immunoglobulin E-set DY252_18290 2f3eb0278ee346ed67ccf6eb069e3baa 535 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 47 524 1.8E-188 T 31-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 DY252_18290 2f3eb0278ee346ed67ccf6eb069e3baa 535 PIRSF PIRSF006281 1 529 3.3E-183 T 31-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD DY252_18290 2f3eb0278ee346ed67ccf6eb069e3baa 535 Gene3D G3DSA:2.60.40.10 422 533 4.3E-17 T 31-10-2018 IPR013783 Immunoglobulin-like fold DY252_17120 7811a7d9fedfe7c31e07450301bc8b27 421 SUPERFAMILY SSF53850 26 414 2.32E-83 T 31-10-2018 DY252_17120 7811a7d9fedfe7c31e07450301bc8b27 421 Gene3D G3DSA:3.40.190.10 35 375 8.2E-108 T 31-10-2018 DY252_17120 7811a7d9fedfe7c31e07450301bc8b27 421 Pfam PF13416 Bacterial extracellular solute-binding protein 47 356 2.9E-53 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_17120 7811a7d9fedfe7c31e07450301bc8b27 421 Gene3D G3DSA:3.40.190.10 146 411 8.2E-108 T 31-10-2018 DY252_08495 efa1111682100bc0385bdf18bd36a379 223 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 22 194 3.5E-41 T 31-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DY252_08495 efa1111682100bc0385bdf18bd36a379 223 SUPERFAMILY SSF100950 20 203 5.02E-45 T 31-10-2018 IPR037171 NagB/RpiA transferase-like DY252_08495 efa1111682100bc0385bdf18bd36a379 223 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 23 194 1.1E-26 T 31-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DY252_08495 efa1111682100bc0385bdf18bd36a379 223 Gene3D G3DSA:3.40.50.10420 20 211 2.6E-41 T 31-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DY252_08495 efa1111682100bc0385bdf18bd36a379 223 PIRSF PIRSF006806 18 198 6.8E-33 T 31-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DY252_10780 b9ef9d5b2db4bdd5fa86d103773e2e46 264 Gene3D G3DSA:3.90.226.10 9 205 3.7E-64 T 31-10-2018 DY252_10780 b9ef9d5b2db4bdd5fa86d103773e2e46 264 Gene3D G3DSA:1.10.12.10 207 263 3.3E-24 T 31-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DY252_10780 b9ef9d5b2db4bdd5fa86d103773e2e46 264 SUPERFAMILY SSF52096 9 262 8.48E-80 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_10780 b9ef9d5b2db4bdd5fa86d103773e2e46 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 262 2.5E-58 T 31-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DY252_08265 acfe939b4c1fc1fbfbf750d3eac20303 126 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 25 98 2.0E-17 T 31-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 DY252_08265 acfe939b4c1fc1fbfbf750d3eac20303 126 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 18 114 5.7E-36 T 31-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 DY252_20505 15197001e3be68ef2b2dce7aff74b8a0 209 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 54 82 - T 31-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 DY252_20505 15197001e3be68ef2b2dce7aff74b8a0 209 SUPERFAMILY SSF49482 6 209 1.44E-66 T 31-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 DY252_20505 15197001e3be68ef2b2dce7aff74b8a0 209 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 11 209 8.6E-78 T 31-10-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 DY252_20505 15197001e3be68ef2b2dce7aff74b8a0 209 Pfam PF00775 Dioxygenase 43 199 1.4E-19 T 31-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 DY252_20505 15197001e3be68ef2b2dce7aff74b8a0 209 Gene3D G3DSA:2.60.130.10 2 209 8.5E-80 T 31-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 DY252_18070 ad2a9573e804f3e4f01414e6ba897d96 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 334 4.7E-47 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_18070 ad2a9573e804f3e4f01414e6ba897d96 336 SUPERFAMILY SSF161098 92 319 1.1E-20 T 31-10-2018 IPR035906 MetI-like superfamily DY252_12550 8838867f68ccbeba50b91739e24ec335 341 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 323 4.4E-39 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_17755 d4a90ca88b82e7c2404cefecf7c37974 231 Gene3D G3DSA:3.40.50.2300 1 120 3.1E-36 T 31-10-2018 DY252_17755 d4a90ca88b82e7c2404cefecf7c37974 231 Gene3D G3DSA:1.10.10.10 121 228 2.3E-25 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_17755 d4a90ca88b82e7c2404cefecf7c37974 231 SUPERFAMILY SSF52172 1 173 4.7E-39 T 31-10-2018 IPR011006 CheY-like superfamily DY252_17755 d4a90ca88b82e7c2404cefecf7c37974 231 SMART SM00862 145 221 2.9E-19 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_17755 d4a90ca88b82e7c2404cefecf7c37974 231 SMART SM00448 1 112 4.5E-37 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_17755 d4a90ca88b82e7c2404cefecf7c37974 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 221 1.2E-19 T 31-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DY252_17755 d4a90ca88b82e7c2404cefecf7c37974 231 Pfam PF00072 Response regulator receiver domain 3 113 2.5E-27 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_15770 c61e678c8e42aeeedead92eef20811bb 506 SUPERFAMILY SSF53720 14 498 6.28E-162 T 31-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DY252_15770 c61e678c8e42aeeedead92eef20811bb 506 Gene3D G3DSA:3.40.309.10 266 464 1.3E-162 T 31-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DY252_15770 c61e678c8e42aeeedead92eef20811bb 506 Gene3D G3DSA:3.40.605.10 23 492 1.3E-162 T 31-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_15770 c61e678c8e42aeeedead92eef20811bb 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 31-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DY252_15770 c61e678c8e42aeeedead92eef20811bb 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 31-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DY252_15770 c61e678c8e42aeeedead92eef20811bb 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 2.5E-165 T 31-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DY252_16295 570d9a47577f3e8edf1736720af864ce 447 SUPERFAMILY SSF64518 1 446 9.94E-66 T 31-10-2018 DY252_16295 570d9a47577f3e8edf1736720af864ce 447 Gene3D G3DSA:1.20.58.1830 6 33 9.2E-39 T 31-10-2018 DY252_16295 570d9a47577f3e8edf1736720af864ce 447 PRINTS PR00207 Flagellin signature 76 95 6.2E-16 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_16295 570d9a47577f3e8edf1736720af864ce 447 PRINTS PR00207 Flagellin signature 111 134 6.2E-16 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_16295 570d9a47577f3e8edf1736720af864ce 447 PRINTS PR00207 Flagellin signature 37 54 6.2E-16 T 31-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DY252_16295 570d9a47577f3e8edf1736720af864ce 447 Gene3D G3DSA:1.10.8.410 397 446 5.9E-21 T 31-10-2018 DY252_16295 570d9a47577f3e8edf1736720af864ce 447 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 139 5.6E-30 T 31-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DY252_16295 570d9a47577f3e8edf1736720af864ce 447 Gene3D G3DSA:1.20.1330.10 274 396 3.4E-10 T 31-10-2018 DY252_16295 570d9a47577f3e8edf1736720af864ce 447 Gene3D G3DSA:1.20.1330.10 45 155 9.2E-39 T 31-10-2018 DY252_16295 570d9a47577f3e8edf1736720af864ce 447 Pfam PF00700 Bacterial flagellin C-terminal helical region 361 445 1.9E-22 T 31-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DY252_20015 8d7e7de234eb2fbde4184de85f39b7f7 316 SUPERFAMILY SSF100950 62 315 1.47E-61 T 31-10-2018 IPR037171 NagB/RpiA transferase-like DY252_20015 8d7e7de234eb2fbde4184de85f39b7f7 316 Pfam PF13384 Homeodomain-like domain 16 55 6.4E-6 T 31-10-2018 DY252_20015 8d7e7de234eb2fbde4184de85f39b7f7 316 Pfam PF04198 Putative sugar-binding domain 62 315 1.4E-65 T 31-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 DY252_20015 8d7e7de234eb2fbde4184de85f39b7f7 316 Gene3D G3DSA:1.10.10.10 4 58 4.0E-14 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_20015 8d7e7de234eb2fbde4184de85f39b7f7 316 Gene3D G3DSA:3.40.50.1360 59 316 2.0E-62 T 31-10-2018 DY252_14675 169cda0c00e4eb78b4b8383058e8cd43 294 SUPERFAMILY SSF103481 191 284 1.57E-10 T 31-10-2018 DY252_14675 169cda0c00e4eb78b4b8383058e8cd43 294 SUPERFAMILY SSF103481 39 139 6.93E-13 T 31-10-2018 DY252_14675 169cda0c00e4eb78b4b8383058e8cd43 294 Pfam PF00892 EamA-like transporter family 155 284 7.7E-20 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_14675 169cda0c00e4eb78b4b8383058e8cd43 294 Pfam PF00892 EamA-like transporter family 6 138 9.2E-22 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_01765 fe45bc4705933976defc8909a924eecd 324 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 231 324 1.8E-9 T 31-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 DY252_01765 fe45bc4705933976defc8909a924eecd 324 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 88 222 2.3E-18 T 31-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 DY252_18985 d26ea52f284a7a82ba1be108da617510 352 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 317 2.0E-50 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_18985 d26ea52f284a7a82ba1be108da617510 352 SUPERFAMILY SSF53850 25 280 7.25E-8 T 31-10-2018 DY252_18985 d26ea52f284a7a82ba1be108da617510 352 Gene3D G3DSA:3.40.190.170 30 346 7.7E-89 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_18300 f3fc711182b8a503fa19f2d068985b1c 244 SUPERFAMILY SSF51735 4 228 1.26E-66 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_18300 f3fc711182b8a503fa19f2d068985b1c 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 189 5.2E-4 T 31-10-2018 DY252_18300 f3fc711182b8a503fa19f2d068985b1c 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_18300 f3fc711182b8a503fa19f2d068985b1c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.9E-25 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_18300 f3fc711182b8a503fa19f2d068985b1c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.9E-25 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_18300 f3fc711182b8a503fa19f2d068985b1c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.9E-25 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_18300 f3fc711182b8a503fa19f2d068985b1c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 5.9E-25 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_18300 f3fc711182b8a503fa19f2d068985b1c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.9E-25 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_18300 f3fc711182b8a503fa19f2d068985b1c 244 Gene3D G3DSA:3.40.50.720 4 241 1.6E-70 T 31-10-2018 DY252_18300 f3fc711182b8a503fa19f2d068985b1c 244 Pfam PF00106 short chain dehydrogenase 7 196 9.7E-53 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_18300 f3fc711182b8a503fa19f2d068985b1c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.8E-7 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_18300 f3fc711182b8a503fa19f2d068985b1c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.8E-7 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_18300 f3fc711182b8a503fa19f2d068985b1c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.8E-7 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_05490 67c4293372a8f99e7ce275204f6e85bf 156 Pfam PF00210 Ferritin-like domain 18 155 4.5E-31 T 31-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DY252_05490 67c4293372a8f99e7ce275204f6e85bf 156 PIRSF PIRSF005900 1 156 1.2E-49 T 31-10-2018 IPR002177 DNA-binding protein Dps DY252_05490 67c4293372a8f99e7ce275204f6e85bf 156 Gene3D G3DSA:1.20.1260.10 1 156 7.6E-60 T 31-10-2018 IPR012347 Ferritin-like DY252_05490 67c4293372a8f99e7ce275204f6e85bf 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 37 53 3.4E-13 T 31-10-2018 IPR002177 DNA-binding protein Dps DY252_05490 67c4293372a8f99e7ce275204f6e85bf 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 132 150 3.4E-13 T 31-10-2018 IPR002177 DNA-binding protein Dps DY252_05490 67c4293372a8f99e7ce275204f6e85bf 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 61 77 3.4E-13 T 31-10-2018 IPR002177 DNA-binding protein Dps DY252_05490 67c4293372a8f99e7ce275204f6e85bf 156 SUPERFAMILY SSF47240 5 155 5.51E-48 T 31-10-2018 IPR009078 Ferritin-like superfamily DY252_05490 67c4293372a8f99e7ce275204f6e85bf 156 ProSitePatterns PS00819 Dps protein family signature 2. 63 77 - T 31-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DY252_05490 67c4293372a8f99e7ce275204f6e85bf 156 ProSitePatterns PS00818 Dps protein family signature 1. 37 53 - T 31-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DY252_02550 6e93ad6cc48f3a9fa04d083fac93a204 132 SUPERFAMILY SSF51316 7 123 3.66E-33 T 31-10-2018 IPR011057 Mss4-like superfamily DY252_02550 6e93ad6cc48f3a9fa04d083fac93a204 132 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 32 115 2.3E-17 T 31-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 DY252_02550 6e93ad6cc48f3a9fa04d083fac93a204 132 Gene3D G3DSA:2.170.150.70 9 118 6.1E-10 T 31-10-2018 DY252_07740 48ac79c757c17e78e07571c98b8dc15a 235 Pfam PF04335 VirB8 protein 22 225 1.2E-66 T 31-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 DY252_07740 48ac79c757c17e78e07571c98b8dc15a 235 SUPERFAMILY SSF54427 93 226 1.18E-26 T 31-10-2018 IPR032710 NTF2-like domain superfamily DY252_07740 48ac79c757c17e78e07571c98b8dc15a 235 Gene3D G3DSA:3.10.450.230 120 225 3.7E-5 T 31-10-2018 DY252_06220 485ca25f3a3e5e2319bb599ccc3f953c 344 SMART SM00342 253 336 4.2E-24 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_06220 485ca25f3a3e5e2319bb599ccc3f953c 344 SUPERFAMILY SSF52317 26 215 1.13E-42 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_06220 485ca25f3a3e5e2319bb599ccc3f953c 344 Gene3D G3DSA:3.40.50.880 21 224 3.7E-47 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_06220 485ca25f3a3e5e2319bb599ccc3f953c 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 320 336 6.9E-5 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_06220 485ca25f3a3e5e2319bb599ccc3f953c 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 305 320 6.9E-5 T 31-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DY252_06220 485ca25f3a3e5e2319bb599ccc3f953c 344 Pfam PF01965 DJ-1/PfpI family 26 190 3.7E-15 T 31-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DY252_06220 485ca25f3a3e5e2319bb599ccc3f953c 344 Gene3D G3DSA:1.10.10.60 234 339 6.9E-28 T 31-10-2018 DY252_06220 485ca25f3a3e5e2319bb599ccc3f953c 344 SUPERFAMILY SSF46689 289 338 2.15E-12 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_06220 485ca25f3a3e5e2319bb599ccc3f953c 344 Pfam PF12833 Helix-turn-helix domain 259 337 3.5E-23 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_01255 488e87009582c57a99f8857c2db2d2de 436 SMART SM00382 50 325 1.2E-10 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_01255 488e87009582c57a99f8857c2db2d2de 436 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 328 398 3.0E-5 T 31-10-2018 IPR019489 Clp ATPase, C-terminal DY252_01255 488e87009582c57a99f8857c2db2d2de 436 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 2 436 41.998 T 31-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 DY252_01255 488e87009582c57a99f8857c2db2d2de 436 SUPERFAMILY SSF52540 7 432 5.5E-85 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_01255 488e87009582c57a99f8857c2db2d2de 436 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 6 436 3.7E-187 T 31-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 DY252_01255 488e87009582c57a99f8857c2db2d2de 436 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 103 1.4E-6 T 31-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DY252_01255 488e87009582c57a99f8857c2db2d2de 436 Pfam PF07724 AAA domain (Cdc48 subfamily) 193 322 4.0E-39 T 31-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DY252_01255 488e87009582c57a99f8857c2db2d2de 436 SMART SM01086 328 422 8.2E-21 T 31-10-2018 IPR019489 Clp ATPase, C-terminal DY252_01255 488e87009582c57a99f8857c2db2d2de 436 Gene3D G3DSA:1.10.8.60 328 433 6.0E-39 T 31-10-2018 DY252_12680 45a8c5db8bcc81ae735423da60d2f020 244 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 9 223 1.5E-63 T 31-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 DY252_16340 6f7d25aac40b29afd2e8eac3064c0f9a 329 Pfam PF01263 Aldose 1-epimerase 17 297 5.1E-30 T 31-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 DY252_16340 6f7d25aac40b29afd2e8eac3064c0f9a 329 Gene3D G3DSA:2.70.98.10 1 301 1.3E-57 T 31-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DY252_16340 6f7d25aac40b29afd2e8eac3064c0f9a 329 SUPERFAMILY SSF74650 10 298 2.57E-40 T 31-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DY252_06715 f954a8d90cdd3a0a5b9254119dcfcc19 276 Gene3D G3DSA:3.20.20.70 2 275 4.3E-67 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_06715 f954a8d90cdd3a0a5b9254119dcfcc19 276 Pfam PF05853 beta-keto acid cleavage enzyme 9 273 2.8E-60 T 31-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 DY252_20160 19b2095cd81ef29f4ec24e48c2ca37a0 343 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 1 329 6.5E-114 T 31-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 DY252_20160 19b2095cd81ef29f4ec24e48c2ca37a0 343 Gene3D G3DSA:1.20.1530.20 3 333 1.5E-22 T 31-10-2018 IPR038770 Sodium/solute symporter superfamily DY252_20160 19b2095cd81ef29f4ec24e48c2ca37a0 343 PIRSF PIRSF005508 1 342 2.2E-117 T 31-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 DY252_20160 19b2095cd81ef29f4ec24e48c2ca37a0 343 Pfam PF01758 Sodium Bile acid symporter family 47 241 1.6E-38 T 31-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 DY252_15245 1f707be3af578aa29c9f74c65a077aed 313 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 303 9.6E-42 T 31-10-2018 IPR020801 Polyketide synthase, acyl transferase domain DY252_15245 1f707be3af578aa29c9f74c65a077aed 313 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 294 4.1E-98 T 31-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DY252_15245 1f707be3af578aa29c9f74c65a077aed 313 Gene3D G3DSA:3.40.366.10 6 289 2.9E-96 T 31-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 DY252_15245 1f707be3af578aa29c9f74c65a077aed 313 Pfam PF00698 Acyl transferase domain 6 288 2.1E-36 T 31-10-2018 IPR014043 Acyl transferase DY252_15245 1f707be3af578aa29c9f74c65a077aed 313 SUPERFAMILY SSF52151 4 301 6.98E-73 T 31-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DY252_15245 1f707be3af578aa29c9f74c65a077aed 313 Gene3D G3DSA:3.30.70.250 130 202 2.9E-96 T 31-10-2018 DY252_15245 1f707be3af578aa29c9f74c65a077aed 313 PIRSF PIRSF000446 1 313 2.0E-98 T 31-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DY252_15245 1f707be3af578aa29c9f74c65a077aed 313 SUPERFAMILY SSF55048 133 200 5.36E-15 T 31-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DY252_06965 acb18ab2587c06f023b31447ee516064 492 Gene3D G3DSA:1.10.579.10 305 492 8.3E-81 T 31-10-2018 DY252_06965 acb18ab2587c06f023b31447ee516064 492 SUPERFAMILY SSF52425 5 186 1.11E-47 T 31-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 DY252_06965 acb18ab2587c06f023b31447ee516064 492 Gene3D G3DSA:3.40.50.620 8 216 6.3E-84 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_06965 acb18ab2587c06f023b31447ee516064 492 SUPERFAMILY SSF48173 202 489 5.76E-109 T 31-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 DY252_06965 acb18ab2587c06f023b31447ee516064 492 Pfam PF00875 DNA photolyase 7 170 4.2E-40 T 31-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 DY252_06965 acb18ab2587c06f023b31447ee516064 492 Gene3D G3DSA:1.25.40.80 139 300 6.3E-84 T 31-10-2018 DY252_06965 acb18ab2587c06f023b31447ee516064 492 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 335 347 - T 31-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal DY252_06965 acb18ab2587c06f023b31447ee516064 492 Pfam PF03441 FAD binding domain of DNA photolyase 286 485 2.9E-82 T 31-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 DY252_06965 acb18ab2587c06f023b31447ee516064 492 PRINTS PR00147 DNA photolyase signature 150 166 2.1E-20 T 31-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DY252_06965 acb18ab2587c06f023b31447ee516064 492 PRINTS PR00147 DNA photolyase signature 355 373 2.1E-20 T 31-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DY252_06965 acb18ab2587c06f023b31447ee516064 492 PRINTS PR00147 DNA photolyase signature 394 408 2.1E-20 T 31-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DY252_06965 acb18ab2587c06f023b31447ee516064 492 PRINTS PR00147 DNA photolyase signature 335 351 2.1E-20 T 31-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DY252_06310 c1cb44a2ea64fdb6b2cfed78fbb8d983 325 Gene3D G3DSA:3.40.50.150 136 325 3.7E-41 T 31-10-2018 DY252_06310 c1cb44a2ea64fdb6b2cfed78fbb8d983 325 Pfam PF01022 Bacterial regulatory protein, arsR family 15 57 1.2E-9 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_06310 c1cb44a2ea64fdb6b2cfed78fbb8d983 325 SMART SM00418 6 85 3.7E-17 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_06310 c1cb44a2ea64fdb6b2cfed78fbb8d983 325 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 2.6E-11 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_06310 c1cb44a2ea64fdb6b2cfed78fbb8d983 325 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 2.6E-11 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_06310 c1cb44a2ea64fdb6b2cfed78fbb8d983 325 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 2.6E-11 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_06310 c1cb44a2ea64fdb6b2cfed78fbb8d983 325 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 2.6E-11 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_06310 c1cb44a2ea64fdb6b2cfed78fbb8d983 325 Pfam PF08241 Methyltransferase domain 153 249 1.2E-24 T 31-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DY252_06310 c1cb44a2ea64fdb6b2cfed78fbb8d983 325 SUPERFAMILY SSF46785 1 92 1.23E-17 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_06310 c1cb44a2ea64fdb6b2cfed78fbb8d983 325 Gene3D G3DSA:1.10.10.10 1 91 1.2E-19 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_06310 c1cb44a2ea64fdb6b2cfed78fbb8d983 325 SUPERFAMILY SSF53335 114 297 5.33E-43 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_00040 a0d6b70a46d22961f45fb6cd10a531fa 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 31-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DY252_00040 a0d6b70a46d22961f45fb6cd10a531fa 347 Gene3D G3DSA:3.40.50.720 158 292 9.1E-99 T 31-10-2018 DY252_00040 a0d6b70a46d22961f45fb6cd10a531fa 347 Gene3D G3DSA:3.90.180.10 11 332 9.1E-99 T 31-10-2018 DY252_00040 a0d6b70a46d22961f45fb6cd10a531fa 347 SUPERFAMILY SSF50129 5 179 8.65E-44 T 31-10-2018 IPR011032 GroES-like superfamily DY252_00040 a0d6b70a46d22961f45fb6cd10a531fa 347 SUPERFAMILY SSF51735 150 299 1.08E-33 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_00040 a0d6b70a46d22961f45fb6cd10a531fa 347 Pfam PF00107 Zinc-binding dehydrogenase 181 302 2.3E-21 T 31-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DY252_00040 a0d6b70a46d22961f45fb6cd10a531fa 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 139 1.3E-29 T 31-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DY252_00040 a0d6b70a46d22961f45fb6cd10a531fa 347 SMART SM00829 10 343 8.7E-5 T 31-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DY252_04890 d8ade48efc72e44e3c33020f1ad2eeb3 355 SUPERFAMILY SSF63380 108 228 5.02E-10 T 31-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DY252_04890 d8ade48efc72e44e3c33020f1ad2eeb3 355 Gene3D G3DSA:2.40.30.10 102 228 4.3E-31 T 31-10-2018 DY252_04890 d8ade48efc72e44e3c33020f1ad2eeb3 355 Pfam PF08021 Siderophore-interacting FAD-binding domain 116 227 1.3E-28 T 31-10-2018 IPR013113 FAD-binding 9, siderophore-interacting DY252_04890 d8ade48efc72e44e3c33020f1ad2eeb3 355 Pfam PF04954 Siderophore-interacting protein 232 352 5.1E-30 T 31-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain DY252_04890 d8ade48efc72e44e3c33020f1ad2eeb3 355 Gene3D G3DSA:3.40.50.80 229 355 3.5E-35 T 31-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DY252_04995 4aef814c7bf4e12c20c554a3bbe0cfe0 687 Pfam PF00202 Aminotransferase class-III 295 581 1.2E-51 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_04995 4aef814c7bf4e12c20c554a3bbe0cfe0 687 Pfam PF02348 Cytidylyltransferase 8 180 1.0E-24 T 31-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 DY252_04995 4aef814c7bf4e12c20c554a3bbe0cfe0 687 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 482 518 - T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_04995 4aef814c7bf4e12c20c554a3bbe0cfe0 687 SUPERFAMILY SSF53448 7 207 4.41E-30 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_04995 4aef814c7bf4e12c20c554a3bbe0cfe0 687 SUPERFAMILY SSF53383 263 660 3.06E-86 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_04995 4aef814c7bf4e12c20c554a3bbe0cfe0 687 Gene3D G3DSA:3.90.550.10 5 210 6.6E-34 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_04995 4aef814c7bf4e12c20c554a3bbe0cfe0 687 Gene3D G3DSA:3.90.1150.10 268 652 3.5E-116 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_04995 4aef814c7bf4e12c20c554a3bbe0cfe0 687 Gene3D G3DSA:3.40.640.10 332 561 3.5E-116 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_19195 81bc0ce6667ef262893e245bad4cfffa 275 Gene3D G3DSA:3.40.1350.10 12 165 4.1E-52 T 31-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 DY252_19195 81bc0ce6667ef262893e245bad4cfffa 275 SUPERFAMILY SSF52980 19 165 3.06E-44 T 31-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DY252_19195 81bc0ce6667ef262893e245bad4cfffa 275 Pfam PF08722 TnsA endonuclease N terminal 74 162 2.1E-23 T 31-10-2018 IPR014833 TnsA endonuclease, N-terminal DY252_19195 81bc0ce6667ef262893e245bad4cfffa 275 Pfam PF08721 TnsA endonuclease C terminal 164 246 4.2E-9 T 31-10-2018 IPR014832 TnsA endonuclease C-terminal DY252_19195 81bc0ce6667ef262893e245bad4cfffa 275 Gene3D G3DSA:1.10.10.10 166 268 1.1E-7 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_11950 ca9a9305106634d1f8cf1ca71dc79deb 229 Pfam PF04654 Protein of unknown function, DUF599 14 220 6.6E-58 T 31-10-2018 IPR006747 Protein of unknown function DUF599 DY252_12820 31443815b20d66c7f322924838c0a716 160 Pfam PF13411 MerR HTH family regulatory protein 24 92 7.8E-25 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_12820 31443815b20d66c7f322924838c0a716 160 Gene3D G3DSA:1.10.1660.10 17 93 1.6E-21 T 31-10-2018 DY252_12820 31443815b20d66c7f322924838c0a716 160 SUPERFAMILY SSF46955 24 92 1.1E-16 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_12820 31443815b20d66c7f322924838c0a716 160 SMART SM00422 24 93 7.9E-8 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_13785 8b14de3ab8045c2bf68fbd32dbafba3f 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 279 4.4E-6 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_13785 8b14de3ab8045c2bf68fbd32dbafba3f 290 Gene3D G3DSA:1.10.3720.10 20 283 1.9E-54 T 31-10-2018 IPR035906 MetI-like superfamily DY252_13785 8b14de3ab8045c2bf68fbd32dbafba3f 290 SUPERFAMILY SSF161098 9 279 1.12E-52 T 31-10-2018 IPR035906 MetI-like superfamily DY252_17865 e4ab6ef4a6c81b001199bc7050e8cbe5 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 130 1.8E-20 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_17865 e4ab6ef4a6c81b001199bc7050e8cbe5 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 159 1.8E-20 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_17865 e4ab6ef4a6c81b001199bc7050e8cbe5 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 1.8E-20 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_17865 e4ab6ef4a6c81b001199bc7050e8cbe5 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.8E-20 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_17865 e4ab6ef4a6c81b001199bc7050e8cbe5 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 178 1.8E-20 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_17865 e4ab6ef4a6c81b001199bc7050e8cbe5 247 Gene3D G3DSA:3.40.50.720 3 247 1.5E-59 T 31-10-2018 DY252_17865 e4ab6ef4a6c81b001199bc7050e8cbe5 247 SUPERFAMILY SSF51735 3 245 6.77E-56 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_17865 e4ab6ef4a6c81b001199bc7050e8cbe5 247 Pfam PF00106 short chain dehydrogenase 4 183 4.4E-43 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_17865 e4ab6ef4a6c81b001199bc7050e8cbe5 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 159 1.9E-13 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_17865 e4ab6ef4a6c81b001199bc7050e8cbe5 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 67 78 1.9E-13 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_17865 e4ab6ef4a6c81b001199bc7050e8cbe5 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 120 128 1.9E-13 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_11710 89ec09d9c4eca4ca1229bd4b7b004b63 226 Pfam PF01965 DJ-1/PfpI family 26 222 2.9E-18 T 31-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DY252_11710 89ec09d9c4eca4ca1229bd4b7b004b63 226 SUPERFAMILY SSF52317 2 224 4.14E-81 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_11710 89ec09d9c4eca4ca1229bd4b7b004b63 226 Gene3D G3DSA:3.40.50.880 1 225 1.2E-83 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_20355 f828caaa247e26b90346ad1474512d7a 468 PIRSF PIRSF000350 1 467 5.9E-94 T 31-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 468 2.6E-177 T 31-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 SUPERFAMILY SSF51905 1 324 2.78E-70 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_20355 f828caaa247e26b90346ad1474512d7a 468 SUPERFAMILY SSF55424 346 467 6.53E-43 T 31-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 Gene3D G3DSA:3.30.390.30 348 468 4.1E-48 T 31-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 Gene3D G3DSA:3.50.50.60 6 330 1.2E-127 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_20355 f828caaa247e26b90346ad1474512d7a 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 2.5E-80 T 31-10-2018 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 2.5E-80 T 31-10-2018 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.5E-80 T 31-10-2018 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.5E-80 T 31-10-2018 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.5E-80 T 31-10-2018 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 2.5E-80 T 31-10-2018 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 2.5E-80 T 31-10-2018 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 2.5E-80 T 31-10-2018 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 2.5E-80 T 31-10-2018 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 31-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 Gene3D G3DSA:3.50.50.60 150 273 1.2E-127 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_20355 f828caaa247e26b90346ad1474512d7a 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 1.1E-40 T 31-10-2018 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.1E-40 T 31-10-2018 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 1.1E-40 T 31-10-2018 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 1.1E-40 T 31-10-2018 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 1.1E-40 T 31-10-2018 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 330 2.8E-75 T 31-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DY252_20355 f828caaa247e26b90346ad1474512d7a 468 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 458 9.5E-40 T 31-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DY252_14230 ea22296b95d51e134f8648afb8fc9419 241 Gene3D G3DSA:1.10.10.10 16 83 1.4E-20 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_14230 ea22296b95d51e134f8648afb8fc9419 241 SMART SM00345 24 82 1.2E-14 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_14230 ea22296b95d51e134f8648afb8fc9419 241 Pfam PF07729 FCD domain 93 215 9.2E-28 T 31-10-2018 IPR011711 GntR, C-terminal DY252_14230 ea22296b95d51e134f8648afb8fc9419 241 SUPERFAMILY SSF48008 89 221 3.14E-25 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_14230 ea22296b95d51e134f8648afb8fc9419 241 Gene3D G3DSA:1.20.120.530 86 236 1.0E-27 T 31-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DY252_14230 ea22296b95d51e134f8648afb8fc9419 241 SMART SM00895 92 216 1.4E-20 T 31-10-2018 IPR011711 GntR, C-terminal DY252_14230 ea22296b95d51e134f8648afb8fc9419 241 SUPERFAMILY SSF46785 16 86 4.03E-19 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_14230 ea22296b95d51e134f8648afb8fc9419 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 5.8E-17 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_10960 ba251cb158236407f8ff45257dc91389 456 Pfam PF00817 impB/mucB/samB family 54 199 7.6E-46 T 31-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DY252_10960 ba251cb158236407f8ff45257dc91389 456 Pfam PF11799 impB/mucB/samB family C-terminal domain 281 387 1.1E-20 T 31-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DY252_10960 ba251cb158236407f8ff45257dc91389 456 SUPERFAMILY SSF100879 285 383 1.43E-25 T 31-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DY252_10960 ba251cb158236407f8ff45257dc91389 456 Gene3D G3DSA:1.10.150.20 214 282 4.6E-14 T 31-10-2018 DY252_10960 ba251cb158236407f8ff45257dc91389 456 Gene3D G3DSA:3.30.70.270 52 209 1.1E-52 T 31-10-2018 DY252_10960 ba251cb158236407f8ff45257dc91389 456 Gene3D G3DSA:3.30.1490.100 286 391 6.6E-26 T 31-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DY252_10960 ba251cb158236407f8ff45257dc91389 456 Gene3D G3DSA:2.30.40.20 68 118 1.1E-52 T 31-10-2018 DY252_10960 ba251cb158236407f8ff45257dc91389 456 Hamap MF_01113 DNA polymerase IV [dinB]. 48 396 33.586 T 31-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 DY252_10960 ba251cb158236407f8ff45257dc91389 456 SUPERFAMILY SSF56672 50 280 3.56E-77 T 31-10-2018 DY252_18810 76666613cfef7683e9484e52db23a7e6 318 Gene3D G3DSA:3.40.50.2300 137 311 4.3E-95 T 31-10-2018 DY252_18810 76666613cfef7683e9484e52db23a7e6 318 Gene3D G3DSA:3.40.50.2300 31 299 4.3E-95 T 31-10-2018 DY252_18810 76666613cfef7683e9484e52db23a7e6 318 Pfam PF13407 Periplasmic binding protein domain 31 261 2.7E-38 T 31-10-2018 IPR025997 Periplasmic binding protein DY252_18810 76666613cfef7683e9484e52db23a7e6 318 SUPERFAMILY SSF53822 17 311 7.57E-59 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_18175 0a31bb4d4fac4864204a988bd199fc6b 508 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 441 8.4E-172 T 31-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 DY252_18175 0a31bb4d4fac4864204a988bd199fc6b 508 SUPERFAMILY SSF50475 3 333 5.49E-119 T 31-10-2018 DY252_18175 0a31bb4d4fac4864204a988bd199fc6b 508 Gene3D G3DSA:3.40.1670.10 348 465 1.6E-50 T 31-10-2018 DY252_18175 0a31bb4d4fac4864204a988bd199fc6b 508 Gene3D G3DSA:1.20.5.570 466 506 2.2E-7 T 31-10-2018 DY252_18175 0a31bb4d4fac4864204a988bd199fc6b 508 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 466 3.3E-164 T 31-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 DY252_18175 0a31bb4d4fac4864204a988bd199fc6b 508 SUPERFAMILY SSF143968 334 498 7.85E-67 T 31-10-2018 DY252_17710 38501495b9065622d809538a2dd62067 184 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 88 179 1.1E-16 T 31-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 DY252_17710 38501495b9065622d809538a2dd62067 184 SUPERFAMILY SSF51197 7 181 7.0E-8 T 31-10-2018 DY252_17710 38501495b9065622d809538a2dd62067 184 SMART SM00702 5 179 2.5E-20 T 31-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 DY252_17710 38501495b9065622d809538a2dd62067 184 Gene3D G3DSA:2.60.120.620 2 184 3.2E-32 T 31-10-2018 DY252_21570 07031747866f7de66de82f1df8b9da0e 62 Pfam PF11216 Protein of unknown function (DUF3012) 31 62 7.3E-22 T 31-10-2018 IPR021379 Protein of unknown function DUF3012 DY252_18925 3b42be5821eb65a8247bcaf4bfdff104 411 SUPERFAMILY SSF51556 56 367 6.81E-76 T 31-10-2018 IPR032466 Metal-dependent hydrolase DY252_18925 3b42be5821eb65a8247bcaf4bfdff104 411 Gene3D G3DSA:3.20.20.140 57 361 2.6E-122 T 31-10-2018 DY252_18925 3b42be5821eb65a8247bcaf4bfdff104 411 Gene3D G3DSA:2.30.40.10 3 400 2.6E-122 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_18925 3b42be5821eb65a8247bcaf4bfdff104 411 SUPERFAMILY SSF51338 1 67 1.18E-7 T 31-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DY252_18925 3b42be5821eb65a8247bcaf4bfdff104 411 Pfam PF07969 Amidohydrolase family 156 382 2.8E-15 T 31-10-2018 IPR013108 Amidohydrolase 3 DY252_21620 7317133ab5a10dd124588383c1f2a259 146 Pfam PF13673 Acetyltransferase (GNAT) domain 45 129 6.3E-10 T 31-10-2018 IPR000182 GNAT domain DY252_21620 7317133ab5a10dd124588383c1f2a259 146 SUPERFAMILY SSF55729 18 136 1.44E-18 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_21620 7317133ab5a10dd124588383c1f2a259 146 Gene3D G3DSA:3.40.630.30 5 133 3.8E-29 T 31-10-2018 DY252_18055 f5268f72178e22c59b26eb8e78a6ee43 340 SUPERFAMILY SSF53383 1 337 2.81E-80 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_18055 f5268f72178e22c59b26eb8e78a6ee43 340 Gene3D G3DSA:3.90.1150.10 5 333 2.3E-112 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_18055 f5268f72178e22c59b26eb8e78a6ee43 340 Gene3D G3DSA:3.40.640.10 12 252 2.3E-112 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_18055 f5268f72178e22c59b26eb8e78a6ee43 340 Pfam PF01212 Beta-eliminating lyase 3 293 1.7E-52 T 31-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 DY252_03090 2d2066b793980abccab9514517b759af 292 SUPERFAMILY SSF51621 5 233 3.14E-65 T 31-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DY252_03090 2d2066b793980abccab9514517b759af 292 PIRSF PIRSF015582 1 292 1.0E-78 T 31-10-2018 IPR011206 Citrate lyase beta subunit-like DY252_03090 2d2066b793980abccab9514517b759af 292 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 9 223 8.1E-45 T 31-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 DY252_03090 2d2066b793980abccab9514517b759af 292 Gene3D G3DSA:3.20.20.60 1 289 1.7E-94 T 31-10-2018 DY252_17825 1ccabe9d0aa195fb638617c97d11603f 77 Pfam PF01722 BolA-like protein 27 77 1.6E-15 T 31-10-2018 IPR002634 BolA protein DY252_17825 1ccabe9d0aa195fb638617c97d11603f 77 PIRSF PIRSF003113 1 77 4.3E-21 T 31-10-2018 IPR002634 BolA protein DY252_17825 1ccabe9d0aa195fb638617c97d11603f 77 SUPERFAMILY SSF82657 1 77 6.67E-25 T 31-10-2018 IPR036065 BolA-like superfamily DY252_17825 1ccabe9d0aa195fb638617c97d11603f 77 Gene3D G3DSA:3.30.300.90 3 75 6.1E-30 T 31-10-2018 DY252_18255 90effefa8b0405425a276534f4479dd0 512 Gene3D G3DSA:3.60.20.40 335 510 2.1E-37 T 31-10-2018 DY252_18255 90effefa8b0405425a276534f4479dd0 512 Pfam PF01019 Gamma-glutamyltranspeptidase 20 316 1.7E-52 T 31-10-2018 DY252_18255 90effefa8b0405425a276534f4479dd0 512 Pfam PF01019 Gamma-glutamyltranspeptidase 331 507 2.6E-30 T 31-10-2018 DY252_18255 90effefa8b0405425a276534f4479dd0 512 SUPERFAMILY SSF56235 3 508 8.91E-100 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_18255 90effefa8b0405425a276534f4479dd0 512 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 335 353 3.3E-42 T 31-10-2018 DY252_18255 90effefa8b0405425a276534f4479dd0 512 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 229 245 3.3E-42 T 31-10-2018 DY252_18255 90effefa8b0405425a276534f4479dd0 512 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 388 403 3.3E-42 T 31-10-2018 DY252_18255 90effefa8b0405425a276534f4479dd0 512 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 124 143 3.3E-42 T 31-10-2018 DY252_18255 90effefa8b0405425a276534f4479dd0 512 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 27 52 3.3E-42 T 31-10-2018 DY252_18255 90effefa8b0405425a276534f4479dd0 512 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 412 429 3.3E-42 T 31-10-2018 DY252_18255 90effefa8b0405425a276534f4479dd0 512 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 106 124 3.3E-42 T 31-10-2018 DY252_18255 90effefa8b0405425a276534f4479dd0 512 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 357 375 3.3E-42 T 31-10-2018 DY252_15060 cdef901da603d218336552be975a59b7 209 SMART SM00749 147 208 0.0032 T 31-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria DY252_15060 cdef901da603d218336552be975a59b7 209 Pfam PF04972 BON domain 142 206 4.9E-11 T 31-10-2018 IPR007055 BON domain DY252_13065 ff86d0efb1b849d908f76e2b41223f0e 227 SUPERFAMILY SSF54768 114 224 2.81E-26 T 31-10-2018 DY252_13065 ff86d0efb1b849d908f76e2b41223f0e 227 Pfam PF00035 Double-stranded RNA binding motif 158 224 1.7E-14 T 31-10-2018 IPR014720 Double-stranded RNA-binding domain DY252_13065 ff86d0efb1b849d908f76e2b41223f0e 227 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 10 224 4.1E-70 T 31-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 DY252_13065 ff86d0efb1b849d908f76e2b41223f0e 227 SUPERFAMILY SSF69065 9 151 1.52E-41 T 31-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DY252_13065 ff86d0efb1b849d908f76e2b41223f0e 227 ProSitePatterns PS00517 Ribonuclease III family signature. 42 50 - T 31-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DY252_13065 ff86d0efb1b849d908f76e2b41223f0e 227 SMART SM00358 158 225 1.0E-22 T 31-10-2018 IPR014720 Double-stranded RNA-binding domain DY252_13065 ff86d0efb1b849d908f76e2b41223f0e 227 Pfam PF14622 Ribonuclease-III-like 17 143 1.7E-32 T 31-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DY252_13065 ff86d0efb1b849d908f76e2b41223f0e 227 Hamap MF_00104 Ribonuclease 3 [rnc]. 7 221 26.818 T 31-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 DY252_13065 ff86d0efb1b849d908f76e2b41223f0e 227 Gene3D G3DSA:1.10.1520.10 6 153 4.3E-39 T 31-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DY252_13065 ff86d0efb1b849d908f76e2b41223f0e 227 SMART SM00535 19 153 2.9E-47 T 31-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DY252_13065 ff86d0efb1b849d908f76e2b41223f0e 227 Gene3D G3DSA:3.30.160.20 156 226 4.0E-21 T 31-10-2018 DY252_02705 10f08f9b90dea1b12858d565cb45000c 337 Gene3D G3DSA:3.30.2010.10 56 148 7.5E-32 T 31-10-2018 DY252_02705 10f08f9b90dea1b12858d565cb45000c 337 Pfam PF01435 Peptidase family M48 65 281 9.6E-42 T 31-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DY252_02705 10f08f9b90dea1b12858d565cb45000c 337 Hamap MF_00188 Protease HtpX [htpX]. 3 281 28.408 T 31-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 DY252_08400 7dc23f4a89824ee01899e980fc39ce53 323 SUPERFAMILY SSF51197 75 281 1.83E-26 T 31-10-2018 DY252_08400 7dc23f4a89824ee01899e980fc39ce53 323 Gene3D G3DSA:2.60.120.620 69 317 1.7E-21 T 31-10-2018 DY252_08400 7dc23f4a89824ee01899e980fc39ce53 323 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 125 204 2.7E-5 T 31-10-2018 IPR008775 Phytanoyl-CoA dioxygenase DY252_09160 ddd184f12a996257df457eb8323d5ff3 256 SUPERFAMILY SSF161098 53 233 1.7E-30 T 31-10-2018 IPR035906 MetI-like superfamily DY252_09160 ddd184f12a996257df457eb8323d5ff3 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 244 2.2E-22 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_09160 ddd184f12a996257df457eb8323d5ff3 256 Gene3D G3DSA:1.10.3720.10 48 247 1.5E-25 T 31-10-2018 IPR035906 MetI-like superfamily DY252_05190 057c65460a98318ed5374a16eb77f0fd 102 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 92 8.2E-13 T 31-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DY252_05190 057c65460a98318ed5374a16eb77f0fd 102 Gene3D G3DSA:3.30.2310.20 1 98 3.6E-21 T 31-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DY252_13305 eea33a8e83548eab930df3a1506a591f 388 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 11 359 6.4E-91 T 31-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 DY252_13305 eea33a8e83548eab930df3a1506a591f 388 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 9 383 35.352 T 31-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 DY252_13305 eea33a8e83548eab930df3a1506a591f 388 Gene3D G3DSA:3.40.50.2000 180 301 1.6E-5 T 31-10-2018 DY252_13305 eea33a8e83548eab930df3a1506a591f 388 Pfam PF02684 Lipid-A-disaccharide synthetase 12 378 6.8E-107 T 31-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 DY252_13305 eea33a8e83548eab930df3a1506a591f 388 SUPERFAMILY SSF53756 11 385 9.94E-37 T 31-10-2018 DY252_02635 e8a50c77b1f94df5f33b2ef11f46b939 62 SUPERFAMILY SSF158997 8 61 1.01E-21 T 31-10-2018 DY252_02635 e8a50c77b1f94df5f33b2ef11f46b939 62 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 8 61 27.583 T 31-10-2018 IPR038053 Uncharacterised protein family UPF0434 DY252_02635 e8a50c77b1f94df5f33b2ef11f46b939 62 Gene3D G3DSA:2.20.25.10 15 62 9.2E-24 T 31-10-2018 DY252_02635 e8a50c77b1f94df5f33b2ef11f46b939 62 Pfam PF03966 Trm112p-like protein 9 48 5.9E-11 T 31-10-2018 IPR005651 Trm112-like DY252_18775 4cffa3403559278639ee4973e322cb64 473 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 461 7.0E-78 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_18775 4cffa3403559278639ee4973e322cb64 473 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 69 466 1.9E-83 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_18775 4cffa3403559278639ee4973e322cb64 473 PIRSF PIRSF006066 5 67 7.0 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_18775 4cffa3403559278639ee4973e322cb64 473 PIRSF PIRSF006066 59 472 3.1E-64 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_17355 899c32fe8e4777e346bd3f36159b8c04 46 Pfam PF08085 Entericidin EcnA/B family 25 45 2.8E-8 T 31-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 DY252_09900 9631247e1ab54c2a5f2ee269d4f73693 81 Pfam PF10073 Uncharacterized protein conserved in bacteria (DUF2312) 8 79 2.6E-32 T 31-10-2018 IPR018753 Azospirillum phage Cd, Gp10 DY252_09900 9631247e1ab54c2a5f2ee269d4f73693 81 Hamap MF_00797 UPF0335 protein . 3 80 21.137 T 31-10-2018 IPR018753 Azospirillum phage Cd, Gp10 DY252_12060 723bc533d4e4ca9edcf12ab70c095b5f 217 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 9 193 7.3E-35 T 31-10-2018 DY252_12060 723bc533d4e4ca9edcf12ab70c095b5f 217 SUPERFAMILY SSF53335 1 192 6.38E-37 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_12060 723bc533d4e4ca9edcf12ab70c095b5f 217 Gene3D G3DSA:3.40.50.150 1 207 1.2E-46 T 31-10-2018 DY252_09475 96f4dcb7ab72367daf03de88de6ea92e 192 Gene3D G3DSA:1.10.357.10 1 190 7.7E-64 T 31-10-2018 DY252_09475 96f4dcb7ab72367daf03de88de6ea92e 192 SUPERFAMILY SSF48498 76 186 1.17E-16 T 31-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DY252_09475 96f4dcb7ab72367daf03de88de6ea92e 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 3.9E-15 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_09475 96f4dcb7ab72367daf03de88de6ea92e 192 SUPERFAMILY SSF46689 4 73 8.72E-18 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_09475 96f4dcb7ab72367daf03de88de6ea92e 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 2.2E-9 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_09475 96f4dcb7ab72367daf03de88de6ea92e 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 2.2E-9 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_18310 e0afa6536c62b046a1e2d32e6c3123c2 226 TIGRFAM TIGR04498 AbiV_defense: abortive infection protein, AbiV family 21 163 4.8E-39 T 31-10-2018 IPR030987 Abortive infection protein, AbiV family DY252_19385 30996d4886c7e56c37d3a9c9ace75f78 384 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 376 4.1E-118 T 31-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DY252_19385 30996d4886c7e56c37d3a9c9ace75f78 384 Gene3D G3DSA:1.20.1090.10 183 384 3.3E-63 T 31-10-2018 DY252_19385 30996d4886c7e56c37d3a9c9ace75f78 384 Gene3D G3DSA:3.40.50.1970 1 182 5.8E-56 T 31-10-2018 DY252_19385 30996d4886c7e56c37d3a9c9ace75f78 384 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 31-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DY252_19385 30996d4886c7e56c37d3a9c9ace75f78 384 SUPERFAMILY SSF56796 3 383 4.45E-121 T 31-10-2018 DY252_02460 edda1339b42c964ed8e0368c0b1557b7 137 Pfam PF01878 EVE domain 2 132 9.2E-48 T 31-10-2018 IPR002740 EVE domain DY252_02460 edda1339b42c964ed8e0368c0b1557b7 137 SUPERFAMILY SSF88697 1 135 9.11E-53 T 31-10-2018 IPR015947 PUA-like superfamily DY252_02460 edda1339b42c964ed8e0368c0b1557b7 137 Gene3D G3DSA:3.10.590.10 1 136 1.6E-52 T 31-10-2018 DY252_16140 76d8f8dfbbd724a88fa7234723a58288 423 SUPERFAMILY SSF55031 220 336 3.93E-31 T 31-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DY252_16140 76d8f8dfbbd724a88fa7234723a58288 423 Gene3D G3DSA:3.40.630.10 23 410 4.2E-154 T 31-10-2018 DY252_16140 76d8f8dfbbd724a88fa7234723a58288 423 Pfam PF01546 Peptidase family M20/M25/M40 86 413 5.1E-32 T 31-10-2018 IPR002933 Peptidase M20 GO:0016787 DY252_16140 76d8f8dfbbd724a88fa7234723a58288 423 SUPERFAMILY SSF53187 7 414 1.66E-96 T 31-10-2018 DY252_16140 76d8f8dfbbd724a88fa7234723a58288 423 Gene3D G3DSA:3.30.70.360 220 334 4.2E-154 T 31-10-2018 DY252_16140 76d8f8dfbbd724a88fa7234723a58288 423 PIRSF PIRSF001235 9 419 1.0E-133 T 31-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DY252_16140 76d8f8dfbbd724a88fa7234723a58288 423 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 15 413 3.9E-128 T 31-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DY252_16140 76d8f8dfbbd724a88fa7234723a58288 423 Pfam PF07687 Peptidase dimerisation domain 220 320 1.6E-5 T 31-10-2018 IPR011650 Peptidase M20, dimerisation domain DY252_11935 b9bc67dc84d4f06a8458c85dff7a6bde 241 Pfam PF13548 Domain of unknown function (DUF4126) 7 183 9.3E-54 T 31-10-2018 IPR025196 Domain of unknown function DUF4126 DY252_21900 a9bae5af3ea7611d717dbc1837eb207c 321 Gene3D G3DSA:3.40.190.10 28 312 2.6E-103 T 31-10-2018 DY252_21900 a9bae5af3ea7611d717dbc1837eb207c 321 Gene3D G3DSA:3.40.190.10 112 249 2.6E-103 T 31-10-2018 DY252_21900 a9bae5af3ea7611d717dbc1837eb207c 321 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 2 312 1.5E-99 T 31-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DY252_21900 a9bae5af3ea7611d717dbc1837eb207c 321 SUPERFAMILY SSF53850 24 313 4.44E-80 T 31-10-2018 DY252_21900 a9bae5af3ea7611d717dbc1837eb207c 321 Pfam PF16868 NMT1-like family 28 312 8.1E-93 T 31-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DY252_07940 0cdae51e08602145359dabc39b4c570f 297 SUPERFAMILY SSF53850 87 290 2.64E-31 T 31-10-2018 DY252_07940 0cdae51e08602145359dabc39b4c570f 297 SUPERFAMILY SSF46785 3 84 3.26E-19 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_07940 0cdae51e08602145359dabc39b4c570f 297 Pfam PF03466 LysR substrate binding domain 87 287 3.4E-31 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_07940 0cdae51e08602145359dabc39b4c570f 297 Gene3D G3DSA:1.10.10.10 1 83 6.6E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_07940 0cdae51e08602145359dabc39b4c570f 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 3.8E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_07940 0cdae51e08602145359dabc39b4c570f 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 3.8E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_07940 0cdae51e08602145359dabc39b4c570f 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 3.8E-6 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_07940 0cdae51e08602145359dabc39b4c570f 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.0E-16 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_07940 0cdae51e08602145359dabc39b4c570f 297 Gene3D G3DSA:3.40.190.290 90 294 1.4E-36 T 31-10-2018 DY252_00575 5ab5823ab0a3fe36b390482c96ed6828 427 Gene3D G3DSA:3.40.190.10 125 247 2.8E-17 T 31-10-2018 DY252_00575 5ab5823ab0a3fe36b390482c96ed6828 427 Pfam PF13531 Bacterial extracellular solute-binding protein 30 266 6.9E-12 T 31-10-2018 DY252_00575 5ab5823ab0a3fe36b390482c96ed6828 427 Gene3D G3DSA:3.40.190.10 3 124 3.0E-6 T 31-10-2018 DY252_00575 5ab5823ab0a3fe36b390482c96ed6828 427 SUPERFAMILY SSF53850 14 299 1.01E-27 T 31-10-2018 DY252_08665 d36aabab260b02e51978e264eed5ea2b 481 SUPERFAMILY SSF53720 9 473 6.81E-170 T 31-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DY252_08665 d36aabab260b02e51978e264eed5ea2b 481 Pfam PF00171 Aldehyde dehydrogenase family 15 471 5.5E-170 T 31-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DY252_08665 d36aabab260b02e51978e264eed5ea2b 481 Gene3D G3DSA:3.40.605.10 15 468 7.0E-181 T 31-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_08665 d36aabab260b02e51978e264eed5ea2b 481 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 31-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DY252_08665 d36aabab260b02e51978e264eed5ea2b 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 31-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DY252_08665 d36aabab260b02e51978e264eed5ea2b 481 Gene3D G3DSA:3.40.309.10 257 445 7.0E-181 T 31-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DY252_09310 acf6297e900a7436a15801378a2dd670 1266 SUPERFAMILY SSF52467 21 226 1.45E-10 T 31-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DY252_09310 acf6297e900a7436a15801378a2dd670 1266 Gene3D G3DSA:3.40.50.1220 20 145 1.2E-5 T 31-10-2018 DY252_09310 acf6297e900a7436a15801378a2dd670 1266 Pfam PF13289 SIR2-like domain 128 262 7.3E-14 T 31-10-2018 IPR039444 SIR2-like domain DY252_09310 acf6297e900a7436a15801378a2dd670 1266 Gene3D G3DSA:3.30.1600.10 37 108 1.2E-5 T 31-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily DY252_09700 5c8994bb3784789cfdadd02da783920b 102 SUPERFAMILY SSF46785 9 97 3.13E-25 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_09700 5c8994bb3784789cfdadd02da783920b 102 Pfam PF01022 Bacterial regulatory protein, arsR family 25 67 6.5E-13 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_09700 5c8994bb3784789cfdadd02da783920b 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 6.2E-11 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_09700 5c8994bb3784789cfdadd02da783920b 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 6.2E-11 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_09700 5c8994bb3784789cfdadd02da783920b 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 6.2E-11 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_09700 5c8994bb3784789cfdadd02da783920b 102 Gene3D G3DSA:1.10.10.10 3 100 1.6E-26 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_09700 5c8994bb3784789cfdadd02da783920b 102 SMART SM00418 15 93 3.2E-28 T 31-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DY252_17020 0497fcb71c70329a5aa2b6f7eda45387 118 PIRSF PIRSF006113 1 118 7.2E-28 T 31-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 DY252_17020 0497fcb71c70329a5aa2b6f7eda45387 118 SUPERFAMILY SSF55620 1 117 2.33E-35 T 31-10-2018 DY252_17020 0497fcb71c70329a5aa2b6f7eda45387 118 Gene3D G3DSA:3.30.479.10 1 118 1.6E-36 T 31-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 DY252_17020 0497fcb71c70329a5aa2b6f7eda45387 118 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 117 2.1E-32 T 31-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 DY252_17020 0497fcb71c70329a5aa2b6f7eda45387 118 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 93 8.9E-28 T 31-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 DY252_16350 e703239b0784a42925665ec39cbb0bc3 253 Gene3D G3DSA:1.10.150.240 47 113 2.2E-55 T 31-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DY252_16350 e703239b0784a42925665ec39cbb0bc3 253 Pfam PF13419 Haloacid dehalogenase-like hydrolase 35 214 1.5E-23 T 31-10-2018 DY252_16350 e703239b0784a42925665ec39cbb0bc3 253 SUPERFAMILY SSF56784 33 251 4.28E-46 T 31-10-2018 IPR036412 HAD-like superfamily DY252_16350 e703239b0784a42925665ec39cbb0bc3 253 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 214 4.0E-14 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_16350 e703239b0784a42925665ec39cbb0bc3 253 Gene3D G3DSA:3.40.50.1000 35 240 2.2E-55 T 31-10-2018 IPR023214 HAD superfamily DY252_01055 08f37e4e891c186d4e2b43e100aed7b7 308 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 180 1.6E-51 T 31-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 DY252_01055 08f37e4e891c186d4e2b43e100aed7b7 308 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 238 3.1E-11 T 31-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 DY252_01055 08f37e4e891c186d4e2b43e100aed7b7 308 Gene3D G3DSA:3.30.2350.10 1 245 4.9E-82 T 31-10-2018 DY252_01055 08f37e4e891c186d4e2b43e100aed7b7 308 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 306 18.063 T 31-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_01055 08f37e4e891c186d4e2b43e100aed7b7 308 SUPERFAMILY SSF55120 10 237 8.63E-73 T 31-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_01055 08f37e4e891c186d4e2b43e100aed7b7 308 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 219 6.2E-65 T 31-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_00970 5d69d9278cd764a74e1dfa3b22621761 189 Gene3D G3DSA:3.90.1720.10 48 153 7.9E-15 T 31-10-2018 DY252_00970 5d69d9278cd764a74e1dfa3b22621761 189 SUPERFAMILY SSF54001 54 162 4.22E-17 T 31-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DY252_00970 5d69d9278cd764a74e1dfa3b22621761 189 Pfam PF05257 CHAP domain 59 131 1.6E-8 T 31-10-2018 IPR007921 CHAP domain DY252_18475 6bd033b193d824ace3cfd8e1c1c9d5b7 108 Gene3D G3DSA:3.30.160.100 4 108 1.2E-13 T 31-10-2018 IPR036567 Ribosome hibernation promotion factor-like DY252_18475 6bd033b193d824ace3cfd8e1c1c9d5b7 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 5 106 8.9E-15 T 31-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DY252_18475 6bd033b193d824ace3cfd8e1c1c9d5b7 108 SUPERFAMILY SSF69754 5 108 2.88E-20 T 31-10-2018 IPR036567 Ribosome hibernation promotion factor-like DY252_11045 4a2722ac4c6c7ac49f53598feabbfc4f 283 SUPERFAMILY SSF103481 185 280 1.44E-9 T 31-10-2018 DY252_11045 4a2722ac4c6c7ac49f53598feabbfc4f 283 SUPERFAMILY SSF103481 41 132 2.35E-11 T 31-10-2018 DY252_10485 ccd6e03d287b6726d5255d66b2834907 204 Pfam PF01810 LysE type translocator 14 197 8.4E-18 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_05070 1fe7789f256b699e727be0833729d011 380 SUPERFAMILY SSF53474 84 376 1.59E-36 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_05070 1fe7789f256b699e727be0833729d011 380 Pfam PF00561 alpha/beta hydrolase fold 93 360 5.4E-10 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_03910 1c8e63adad0c84ba7b7c01d1531d628f 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 408 2.0E-5 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_03910 1c8e63adad0c84ba7b7c01d1531d628f 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 2.0E-5 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_03910 1c8e63adad0c84ba7b7c01d1531d628f 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 2.0E-5 T 31-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DY252_03910 1c8e63adad0c84ba7b7c01d1531d628f 467 SMART SM00387 358 456 1.1E-8 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_03910 1c8e63adad0c84ba7b7c01d1531d628f 467 Gene3D G3DSA:3.30.450.20 32 209 3.3E-42 T 31-10-2018 DY252_03910 1c8e63adad0c84ba7b7c01d1531d628f 467 Pfam PF17200 Single Cache domain 2 51 195 1.6E-36 T 31-10-2018 IPR033480 Single Cache domain 2 DY252_03910 1c8e63adad0c84ba7b7c01d1531d628f 467 Pfam PF07730 Histidine kinase 253 320 4.5E-16 T 31-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DY252_03910 1c8e63adad0c84ba7b7c01d1531d628f 467 PIRSF PIRSF037314 2 465 1.4E-177 T 31-10-2018 IPR017171 Signal transduction histidine kinase, MctS DY252_03910 1c8e63adad0c84ba7b7c01d1531d628f 467 SUPERFAMILY SSF55874 328 453 1.44E-20 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_03910 1c8e63adad0c84ba7b7c01d1531d628f 467 Gene3D G3DSA:3.30.565.10 317 460 6.6E-32 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_03910 1c8e63adad0c84ba7b7c01d1531d628f 467 SMART SM01049 45 136 2.4E-22 T 31-10-2018 IPR033480 Single Cache domain 2 DY252_03910 1c8e63adad0c84ba7b7c01d1531d628f 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 454 3.7E-8 T 31-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DY252_18015 c6277520ec5ac1b55b555ea3c5453ac7 247 SUPERFAMILY SSF52402 45 206 3.91E-37 T 31-10-2018 DY252_18015 c6277520ec5ac1b55b555ea3c5453ac7 247 PIRSF PIRSF000857 4 246 3.6E-67 T 31-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 DY252_18015 c6277520ec5ac1b55b555ea3c5453ac7 247 Gene3D G3DSA:3.40.50.620 15 246 7.6E-52 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_18015 c6277520ec5ac1b55b555ea3c5453ac7 247 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 52 219 3.5E-34 T 31-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 DY252_12595 9a7903c725f135aa4850899819aa4d5e 405 Gene3D G3DSA:3.30.1540.10 235 332 2.2E-123 T 31-10-2018 DY252_12595 9a7903c725f135aa4850899819aa4d5e 405 Gene3D G3DSA:3.40.50.10540 7 398 2.2E-123 T 31-10-2018 IPR023606 CoA-transferase family III domain superfamily DY252_12595 9a7903c725f135aa4850899819aa4d5e 405 Pfam PF02515 CoA-transferase family III 7 382 1.6E-119 T 31-10-2018 IPR003673 CoA-transferase family III GO:0003824 DY252_12595 9a7903c725f135aa4850899819aa4d5e 405 SUPERFAMILY SSF89796 5 404 2.09E-123 T 31-10-2018 IPR023606 CoA-transferase family III domain superfamily DY252_00310 1d9a817ada2fb92a34ced9d3b01b6044 200 SUPERFAMILY SSF52833 41 198 1.23E-52 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_00310 1d9a817ada2fb92a34ced9d3b01b6044 200 Gene3D G3DSA:3.40.30.10 37 199 5.4E-55 T 31-10-2018 DY252_00310 1d9a817ada2fb92a34ced9d3b01b6044 200 Pfam PF02630 SCO1/SenC 18 185 9.4E-44 T 31-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_07870 0a877ede907fc5aac15de32af460f818 143 SUPERFAMILY SSF54637 2 133 7.32E-33 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_07870 0a877ede907fc5aac15de32af460f818 143 Pfam PF03061 Thioesterase superfamily 19 101 1.2E-8 T 31-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DY252_07870 0a877ede907fc5aac15de32af460f818 143 Gene3D G3DSA:3.10.129.10 1 135 1.7E-32 T 31-10-2018 DY252_12840 e423c6cfa43fe843a8e47cb80759d227 192 Pfam PF02620 Uncharacterized ACR, COG1399 66 185 2.0E-11 T 31-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD DY252_09660 59aa734852a89c71de1f43413f8f7767 222 Pfam PF13181 Tetratricopeptide repeat 170 194 0.046 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_09660 59aa734852a89c71de1f43413f8f7767 222 Gene3D G3DSA:1.25.40.10 46 221 5.5E-17 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_09660 59aa734852a89c71de1f43413f8f7767 222 SUPERFAMILY SSF48452 70 191 1.81E-14 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_08195 7ba564f80cd632f22eab0dbb3f027f37 157 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 10 154 27.124 T 31-10-2018 IPR003791 Protein of unknown function UPF0178 DY252_08195 7ba564f80cd632f22eab0dbb3f027f37 157 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 25 152 8.5E-40 T 31-10-2018 IPR003791 Protein of unknown function UPF0178 DY252_00560 65555ee26f511ce839f0d78b92831d3c 451 Gene3D G3DSA:3.40.190.10 38 304 2.0E-50 T 31-10-2018 DY252_00560 65555ee26f511ce839f0d78b92831d3c 451 SUPERFAMILY SSF53850 29 317 2.87E-51 T 31-10-2018 DY252_00560 65555ee26f511ce839f0d78b92831d3c 451 Pfam PF13343 Bacterial extracellular solute-binding protein 82 311 1.2E-28 T 31-10-2018 DY252_00560 65555ee26f511ce839f0d78b92831d3c 451 Gene3D G3DSA:3.40.190.10 139 255 2.0E-50 T 31-10-2018 DY252_05850 05a4bad0f83ad5c9d258c05dc9ca4a53 86 Pfam PF09928 Predicted small integral membrane protein (DUF2160) 25 86 2.4E-10 T 31-10-2018 IPR018678 Protein of unknown function DUF2160, transmembrane DY252_17500 340639b40718abc52c720fb594f811d9 1156 SUPERFAMILY SSF82171 87 575 3.53E-5 T 31-10-2018 DY252_19825 362bf6edacbbcb9475fdb5d9015b1bb2 517 Pfam PF04748 Divergent polysaccharide deacetylase 248 461 4.2E-56 T 31-10-2018 IPR006837 Divergent polysaccharide deacetylase DY252_19825 362bf6edacbbcb9475fdb5d9015b1bb2 517 SUPERFAMILY SSF88713 243 461 2.07E-52 T 31-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DY252_19825 362bf6edacbbcb9475fdb5d9015b1bb2 517 Gene3D G3DSA:3.20.20.370 227 491 2.1E-73 T 31-10-2018 DY252_21220 9cd965f361ada5b4e2fbf7b29d172ede 406 Pfam PF13173 AAA domain 18 133 4.6E-22 T 31-10-2018 DY252_21220 9cd965f361ada5b4e2fbf7b29d172ede 406 Pfam PF13635 Domain of unknown function (DUF4143) 196 355 2.3E-27 T 31-10-2018 IPR025420 Domain of unknown function DUF4143 DY252_21220 9cd965f361ada5b4e2fbf7b29d172ede 406 SUPERFAMILY SSF52540 11 201 8.89E-16 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_21220 9cd965f361ada5b4e2fbf7b29d172ede 406 Gene3D G3DSA:3.40.50.300 1 90 5.4E-6 T 31-10-2018 DY252_04955 a0dbba764baf91f340baaea9e9fe2e92 384 Pfam PF00534 Glycosyl transferases group 1 195 352 2.4E-24 T 31-10-2018 IPR001296 Glycosyl transferase, family 1 DY252_04955 a0dbba764baf91f340baaea9e9fe2e92 384 Gene3D G3DSA:3.40.50.2000 132 367 3.5E-43 T 31-10-2018 DY252_04955 a0dbba764baf91f340baaea9e9fe2e92 384 SUPERFAMILY SSF53756 67 370 5.08E-53 T 31-10-2018 DY252_04955 a0dbba764baf91f340baaea9e9fe2e92 384 Gene3D G3DSA:3.40.50.2000 177 355 3.5E-43 T 31-10-2018 DY252_05335 9d9d4b115d4af86fad779f929568f4d4 209 SUPERFAMILY SSF50715 5 193 1.34E-57 T 31-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DY252_05335 9d9d4b115d4af86fad779f929568f4d4 209 Gene3D G3DSA:2.170.120.20 99 194 3.2E-27 T 31-10-2018 IPR037121 Ribosomal protein L25, C-terminal DY252_05335 9d9d4b115d4af86fad779f929568f4d4 209 Pfam PF01386 Ribosomal L25p family 6 93 1.0E-24 T 31-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 DY252_05335 9d9d4b115d4af86fad779f929568f4d4 209 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 184 1.5E-46 T 31-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 DY252_05335 9d9d4b115d4af86fad779f929568f4d4 209 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 185 29.928 T 31-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 DY252_05335 9d9d4b115d4af86fad779f929568f4d4 209 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 186 1.4E-30 T 31-10-2018 IPR020057 Ribosomal protein L25, beta domain DY252_05335 9d9d4b115d4af86fad779f929568f4d4 209 Gene3D G3DSA:2.40.240.10 4 96 8.9E-28 T 31-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DY252_05335 9d9d4b115d4af86fad779f929568f4d4 209 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 27 95 2.0E-10 T 31-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 DY252_16125 49300b06562cfff97ff74011157ebedd 443 SUPERFAMILY SSF53383 16 441 2.99E-125 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_16125 49300b06562cfff97ff74011157ebedd 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 253 290 - T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_16125 49300b06562cfff97ff74011157ebedd 443 Pfam PF00202 Aminotransferase class-III 25 439 1.3E-100 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_16125 49300b06562cfff97ff74011157ebedd 443 Gene3D G3DSA:3.90.1150.10 28 433 1.4E-151 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_16125 49300b06562cfff97ff74011157ebedd 443 Gene3D G3DSA:3.40.640.10 65 345 1.4E-151 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_16125 49300b06562cfff97ff74011157ebedd 443 PIRSF PIRSF000521 185 442 4.0E-25 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_16125 49300b06562cfff97ff74011157ebedd 443 PIRSF PIRSF000521 32 147 1.3E-6 T 31-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DY252_02680 515ff773a3735c6e9c734d403c8c6808 212 SUPERFAMILY SSF48498 79 190 9.64E-9 T 31-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DY252_02680 515ff773a3735c6e9c734d403c8c6808 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 8.7E-18 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_02680 515ff773a3735c6e9c734d403c8c6808 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.7E-9 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_02680 515ff773a3735c6e9c734d403c8c6808 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.7E-9 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_02680 515ff773a3735c6e9c734d403c8c6808 212 SUPERFAMILY SSF46689 3 83 4.54E-19 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_02680 515ff773a3735c6e9c734d403c8c6808 212 Gene3D G3DSA:1.10.357.10 1 197 1.3E-40 T 31-10-2018 DY252_18280 07ff099cd323110c02f2449af0067e73 358 Pfam PF01032 FecCD transport family 37 351 2.8E-85 T 31-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DY252_18280 07ff099cd323110c02f2449af0067e73 358 SUPERFAMILY SSF81345 24 352 7.32E-74 T 31-10-2018 IPR037294 ABC transporter, BtuC-like DY252_18280 07ff099cd323110c02f2449af0067e73 358 Gene3D G3DSA:1.10.3470.10 25 356 8.4E-90 T 31-10-2018 IPR037294 ABC transporter, BtuC-like DY252_20510 001a85450d3424101d39662d0adac796 237 Pfam PF00775 Dioxygenase 41 224 6.3E-55 T 31-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 DY252_20510 001a85450d3424101d39662d0adac796 237 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 12 232 9.7E-110 T 31-10-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 DY252_20510 001a85450d3424101d39662d0adac796 237 Gene3D G3DSA:2.60.130.10 1 235 1.2E-90 T 31-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 DY252_20510 001a85450d3424101d39662d0adac796 237 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 4 35 2.7E-9 T 31-10-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|MetaCyc: PWY-6041 DY252_20510 001a85450d3424101d39662d0adac796 237 SUPERFAMILY SSF49482 3 233 1.14E-79 T 31-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 DY252_01590 85b3de7a99022b4be6f223f17a9d9a96 130 Gene3D G3DSA:3.10.180.10 2 128 1.4E-38 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_01590 85b3de7a99022b4be6f223f17a9d9a96 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 123 3.4E-14 T 31-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DY252_01590 85b3de7a99022b4be6f223f17a9d9a96 130 SUPERFAMILY SSF54593 4 129 4.95E-24 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_15635 65c0423c8aeb208a225bd49e64ccd828 578 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 269 1.7E-11 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_15635 65c0423c8aeb208a225bd49e64ccd828 578 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 389 563 3.2E-17 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_15635 65c0423c8aeb208a225bd49e64ccd828 578 SUPERFAMILY SSF161098 312 564 5.79E-43 T 31-10-2018 IPR035906 MetI-like superfamily DY252_15635 65c0423c8aeb208a225bd49e64ccd828 578 SUPERFAMILY SSF161098 23 290 3.71E-43 T 31-10-2018 IPR035906 MetI-like superfamily DY252_15635 65c0423c8aeb208a225bd49e64ccd828 578 Gene3D G3DSA:1.10.3720.10 24 291 1.1E-47 T 31-10-2018 IPR035906 MetI-like superfamily DY252_15635 65c0423c8aeb208a225bd49e64ccd828 578 Gene3D G3DSA:1.10.3720.10 312 569 1.4E-40 T 31-10-2018 IPR035906 MetI-like superfamily DY252_03745 21ba7c0a56eda172865cd3fe8af729ca 288 Pfam PF13616 PPIC-type PPIASE domain 132 230 2.5E-21 T 31-10-2018 DY252_03745 21ba7c0a56eda172865cd3fe8af729ca 288 Pfam PF13624 SurA N-terminal domain 16 129 2.3E-6 T 31-10-2018 DY252_03745 21ba7c0a56eda172865cd3fe8af729ca 288 SUPERFAMILY SSF54534 131 228 1.11E-30 T 31-10-2018 DY252_03745 21ba7c0a56eda172865cd3fe8af729ca 288 SUPERFAMILY SSF109998 30 166 4.71E-17 T 31-10-2018 IPR027304 Trigger factor/SurA domain superfamily DY252_03745 21ba7c0a56eda172865cd3fe8af729ca 288 Gene3D G3DSA:1.10.4030.30 30 104 6.9E-7 T 31-10-2018 DY252_03745 21ba7c0a56eda172865cd3fe8af729ca 288 Gene3D G3DSA:3.10.50.40 135 234 6.7E-34 T 31-10-2018 DY252_15350 4f7a854c552a7385ad084eb89b15e9c5 216 Pfam PF09976 Tetratricopeptide repeat-like domain 21 184 1.4E-9 T 31-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 DY252_01775 7e9fcd2c33aaeff04c14ea23a25962b6 181 Pfam PF01661 Macro domain 29 141 3.8E-42 T 31-10-2018 IPR002589 Macro domain DY252_01775 7e9fcd2c33aaeff04c14ea23a25962b6 181 SMART SM00506 12 141 1.8E-52 T 31-10-2018 IPR002589 Macro domain DY252_01775 7e9fcd2c33aaeff04c14ea23a25962b6 181 SUPERFAMILY SSF52949 12 177 4.04E-60 T 31-10-2018 DY252_01775 7e9fcd2c33aaeff04c14ea23a25962b6 181 Gene3D G3DSA:3.40.220.10 2 179 2.5E-66 T 31-10-2018 DY252_02150 33e3149e533b6a16b64201344a08d178 149 Gene3D G3DSA:3.10.129.10 4 137 1.2E-33 T 31-10-2018 DY252_02150 33e3149e533b6a16b64201344a08d178 149 Pfam PF03061 Thioesterase superfamily 49 125 7.4E-9 T 31-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DY252_02150 33e3149e533b6a16b64201344a08d178 149 SUPERFAMILY SSF54637 14 133 6.94E-29 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_02150 33e3149e533b6a16b64201344a08d178 149 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 19 133 1.8E-14 T 31-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 DY252_12945 4c38fcf7ca2412dbd89450c7acf91445 363 SUPERFAMILY SSF52096 15 338 3.45E-67 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_12945 4c38fcf7ca2412dbd89450c7acf91445 363 Gene3D G3DSA:3.90.226.40 9 362 1.4E-129 T 31-10-2018 DY252_12945 4c38fcf7ca2412dbd89450c7acf91445 363 Pfam PF16113 Enoyl-CoA hydratase/isomerase 24 352 3.2E-130 T 31-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 DY252_12725 8cf712711b26b103e4140e80349eb231 501 Gene3D G3DSA:3.30.2130.10 325 478 1.3E-13 T 31-10-2018 DY252_12725 8cf712711b26b103e4140e80349eb231 501 SUPERFAMILY SSF55021 411 477 3.51E-10 T 31-10-2018 DY252_12725 8cf712711b26b103e4140e80349eb231 501 SUPERFAMILY SSF53633 14 320 1.07E-51 T 31-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DY252_12725 8cf712711b26b103e4140e80349eb231 501 Pfam PF00696 Amino acid kinase family 14 307 3.3E-26 T 31-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DY252_12725 8cf712711b26b103e4140e80349eb231 501 Gene3D G3DSA:3.40.1160.10 12 321 1.4E-52 T 31-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DY252_19085 628f3e0858adaf7b617f984831b9e852 317 SUPERFAMILY SSF51735 106 285 2.66E-55 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_19085 628f3e0858adaf7b617f984831b9e852 317 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 285 1.6E-57 T 31-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DY252_19085 628f3e0858adaf7b617f984831b9e852 317 Gene3D G3DSA:3.40.50.720 2 309 2.7E-120 T 31-10-2018 DY252_19085 628f3e0858adaf7b617f984831b9e852 317 Gene3D G3DSA:3.40.50.720 105 301 2.7E-120 T 31-10-2018 DY252_19085 628f3e0858adaf7b617f984831b9e852 317 SUPERFAMILY SSF52283 1 125 4.54E-26 T 31-10-2018 DY252_19085 628f3e0858adaf7b617f984831b9e852 317 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 19 311 1.6E-13 T 31-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DY252_19085 628f3e0858adaf7b617f984831b9e852 317 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 31-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DY252_15255 ee6889e22454f58882510ce3a20195dc 77 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 5 76 22.027 T 31-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_15255 ee6889e22454f58882510ce3a20195dc 77 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 24 73 1.0E-20 T 31-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_15255 ee6889e22454f58882510ce3a20195dc 77 Gene3D G3DSA:4.10.640.10 2 77 1.7E-28 T 31-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_15255 ee6889e22454f58882510ce3a20195dc 77 Pfam PF01084 Ribosomal protein S18 23 71 2.4E-26 T 31-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_15255 ee6889e22454f58882510ce3a20195dc 77 PRINTS PR00974 Ribosomal protein S18 family signature 41 48 3.9E-19 T 31-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_15255 ee6889e22454f58882510ce3a20195dc 77 PRINTS PR00974 Ribosomal protein S18 family signature 49 63 3.9E-19 T 31-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_15255 ee6889e22454f58882510ce3a20195dc 77 PRINTS PR00974 Ribosomal protein S18 family signature 31 41 3.9E-19 T 31-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_15255 ee6889e22454f58882510ce3a20195dc 77 PRINTS PR00974 Ribosomal protein S18 family signature 63 73 3.9E-19 T 31-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_15255 ee6889e22454f58882510ce3a20195dc 77 ProSitePatterns PS00057 Ribosomal protein S18 signature. 24 47 - T 31-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_15255 ee6889e22454f58882510ce3a20195dc 77 TIGRFAM TIGR00165 S18: ribosomal protein bS18 7 75 1.3E-30 T 31-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_15255 ee6889e22454f58882510ce3a20195dc 77 SUPERFAMILY SSF46911 3 75 6.02E-28 T 31-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_06570 504c21c1618dad61291dbe66275b06cf 671 SUPERFAMILY SSF58104 346 664 4.32E-63 T 31-10-2018 DY252_06570 504c21c1618dad61291dbe66275b06cf 671 SMART SM01358 56 293 9.3E-27 T 31-10-2018 IPR032255 Helical bimodular sensor domain DY252_06570 504c21c1618dad61291dbe66275b06cf 671 SMART SM00283 411 665 5.7E-46 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_06570 504c21c1618dad61291dbe66275b06cf 671 Gene3D G3DSA:1.10.287.950 380 671 3.4E-55 T 31-10-2018 DY252_06570 504c21c1618dad61291dbe66275b06cf 671 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 474 638 2.8E-33 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_06570 504c21c1618dad61291dbe66275b06cf 671 SMART SM00304 322 375 9.0E-5 T 31-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DY252_06570 504c21c1618dad61291dbe66275b06cf 671 Gene3D G3DSA:1.20.1480.50 281 379 1.8E-11 T 31-10-2018 DY252_22070 af096b70f61046cfcd5e2055bc4540fb 111 SUPERFAMILY SSF52833 2 111 1.53E-27 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_22070 af096b70f61046cfcd5e2055bc4540fb 111 Pfam PF03960 ArsC family 6 109 6.2E-9 T 31-10-2018 IPR006660 Arsenate reductase-like DY252_22070 af096b70f61046cfcd5e2055bc4540fb 111 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 111 2.3E-36 T 31-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 DY252_22070 af096b70f61046cfcd5e2055bc4540fb 111 Gene3D G3DSA:3.40.30.10 1 111 1.2E-40 T 31-10-2018 DY252_21000 ed9ad3518821cc1f1b76007830fc740b 377 Gene3D G3DSA:2.40.50.100 83 215 3.0E-69 T 31-10-2018 DY252_21000 ed9ad3518821cc1f1b76007830fc740b 377 Gene3D G3DSA:2.40.30.170 68 295 3.0E-69 T 31-10-2018 DY252_21000 ed9ad3518821cc1f1b76007830fc740b 377 Gene3D G3DSA:2.40.420.20 63 372 3.0E-69 T 31-10-2018 DY252_21000 ed9ad3518821cc1f1b76007830fc740b 377 Gene3D G3DSA:1.10.287.470 117 176 3.0E-69 T 31-10-2018 DY252_21000 ed9ad3518821cc1f1b76007830fc740b 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 59 374 1.1E-61 T 31-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DY252_21000 ed9ad3518821cc1f1b76007830fc740b 377 Pfam PF13533 Biotin-lipoyl like 84 130 6.5E-11 T 31-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DY252_21000 ed9ad3518821cc1f1b76007830fc740b 377 SUPERFAMILY SSF111369 74 293 7.32E-27 T 31-10-2018 DY252_12385 1cf921cf986c76e26e8fa5ce36d9fa96 324 Pfam PF16868 NMT1-like family 34 315 3.0E-69 T 31-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DY252_12385 1cf921cf986c76e26e8fa5ce36d9fa96 324 Gene3D G3DSA:3.40.190.10 118 252 9.2E-61 T 31-10-2018 DY252_12385 1cf921cf986c76e26e8fa5ce36d9fa96 324 SUPERFAMILY SSF53850 28 316 2.01E-54 T 31-10-2018 DY252_12385 1cf921cf986c76e26e8fa5ce36d9fa96 324 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 315 2.4E-44 T 31-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DY252_12385 1cf921cf986c76e26e8fa5ce36d9fa96 324 Gene3D G3DSA:3.40.190.10 34 315 9.2E-61 T 31-10-2018 DY252_15330 fb7a615d8b4868abfbca950c6e0e6fe8 282 SUPERFAMILY SSF46689 3 80 4.84E-16 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_15330 fb7a615d8b4868abfbca950c6e0e6fe8 282 Gene3D G3DSA:1.10.10.10 1 78 6.3E-17 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_15330 fb7a615d8b4868abfbca950c6e0e6fe8 282 SUPERFAMILY SSF53697 101 256 1.56E-13 T 31-10-2018 DY252_15330 fb7a615d8b4868abfbca950c6e0e6fe8 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 75 3.2E-13 T 31-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DY252_15330 fb7a615d8b4868abfbca950c6e0e6fe8 282 Gene3D G3DSA:3.40.50.10490 97 279 1.9E-20 T 31-10-2018 DY252_17920 880214e2c39a4d1415562eb0154df1fb 450 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 308 8.8E-67 T 31-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DY252_17920 880214e2c39a4d1415562eb0154df1fb 450 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 31-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_17920 880214e2c39a4d1415562eb0154df1fb 450 SUPERFAMILY SSF48163 286 446 1.44E-29 T 31-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DY252_17920 880214e2c39a4d1415562eb0154df1fb 450 Gene3D G3DSA:3.40.50.620 1 319 3.5E-103 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_17920 880214e2c39a4d1415562eb0154df1fb 450 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 1 449 24.795 T 31-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DY252_17920 880214e2c39a4d1415562eb0154df1fb 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 1.9E-22 T 31-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DY252_17920 880214e2c39a4d1415562eb0154df1fb 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 1.9E-22 T 31-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DY252_17920 880214e2c39a4d1415562eb0154df1fb 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 1.9E-22 T 31-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DY252_17920 880214e2c39a4d1415562eb0154df1fb 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 199 207 1.9E-22 T 31-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DY252_17920 880214e2c39a4d1415562eb0154df1fb 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 183 193 1.9E-22 T 31-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DY252_17920 880214e2c39a4d1415562eb0154df1fb 450 SUPERFAMILY SSF52374 4 300 6.44E-86 T 31-10-2018 DY252_17920 880214e2c39a4d1415562eb0154df1fb 450 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 6 445 3.6E-96 T 31-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DY252_17920 880214e2c39a4d1415562eb0154df1fb 450 Gene3D G3DSA:1.10.10.350 360 447 1.2E-16 T 31-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DY252_08185 c7ff9d88e701d5db685eefed4c6b4416 242 SUPERFAMILY SSF52540 3 235 1.65E-78 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_08185 c7ff9d88e701d5db685eefed4c6b4416 242 SMART SM00382 28 215 4.2E-17 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_08185 c7ff9d88e701d5db685eefed4c6b4416 242 PIRSF PIRSF039085 1 242 1.1E-109 T 31-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DY252_08185 c7ff9d88e701d5db685eefed4c6b4416 242 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_08185 c7ff9d88e701d5db685eefed4c6b4416 242 Gene3D G3DSA:3.40.50.300 2 240 3.8E-78 T 31-10-2018 DY252_08185 c7ff9d88e701d5db685eefed4c6b4416 242 Pfam PF00005 ABC transporter 19 167 6.0E-36 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_10055 3c66e8bd82e50f147686c65dc9610bd7 248 Pfam PF01709 Transcriptional regulator 5 236 8.4E-90 T 31-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_10055 3c66e8bd82e50f147686c65dc9610bd7 248 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 33.078 T 31-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_10055 3c66e8bd82e50f147686c65dc9610bd7 248 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 4.7E-92 T 31-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_10055 3c66e8bd82e50f147686c65dc9610bd7 248 Gene3D G3DSA:3.30.70.980 132 204 6.1E-50 T 31-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_10055 3c66e8bd82e50f147686c65dc9610bd7 248 SUPERFAMILY SSF75625 3 244 1.09E-87 T 31-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_10055 3c66e8bd82e50f147686c65dc9610bd7 248 Gene3D G3DSA:1.10.10.200 1 80 8.1E-31 T 31-10-2018 IPR017856 Integrase-like, N-terminal DY252_10055 3c66e8bd82e50f147686c65dc9610bd7 248 Gene3D G3DSA:3.30.70.980 83 235 6.1E-50 T 31-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_20400 e08d4aa0e908beec435375638b95cd97 425 SUPERFAMILY SSF53335 154 417 4.6E-78 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_20400 e08d4aa0e908beec435375638b95cd97 425 Pfam PF02353 Mycolic acid cyclopropane synthetase 148 412 8.3E-88 T 31-10-2018 DY252_20400 e08d4aa0e908beec435375638b95cd97 425 Gene3D G3DSA:3.40.50.150 152 424 2.9E-102 T 31-10-2018 DY252_20400 e08d4aa0e908beec435375638b95cd97 425 PIRSF PIRSF003085 27 425 1.5E-132 T 31-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 DY252_16740 989400ca65037b30caabf5d354792e47 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 139 3.5E-55 T 31-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 DY252_16740 989400ca65037b30caabf5d354792e47 141 Gene3D G3DSA:3.30.300.20 47 141 9.8E-34 T 31-10-2018 IPR015946 K homology domain-like, alpha/beta DY252_16740 989400ca65037b30caabf5d354792e47 141 Gene3D G3DSA:2.20.25.10 1 46 2.2E-19 T 31-10-2018 DY252_16740 989400ca65037b30caabf5d354792e47 141 Pfam PF02566 OsmC-like protein 42 138 3.3E-17 T 31-10-2018 IPR003718 OsmC/Ohr family DY252_16740 989400ca65037b30caabf5d354792e47 141 SUPERFAMILY SSF82784 1 140 9.16E-43 T 31-10-2018 IPR036102 OsmC/Ohr superfamily DY252_08020 122cc83ce66e9fab64a27a7ab7ec5605 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 252 2.5E-58 T 31-10-2018 DY252_08020 122cc83ce66e9fab64a27a7ab7ec5605 253 Gene3D G3DSA:3.40.50.720 2 252 3.5E-70 T 31-10-2018 DY252_08020 122cc83ce66e9fab64a27a7ab7ec5605 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.2E-34 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08020 122cc83ce66e9fab64a27a7ab7ec5605 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.2E-34 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08020 122cc83ce66e9fab64a27a7ab7ec5605 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.2E-34 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08020 122cc83ce66e9fab64a27a7ab7ec5605 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.2E-34 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08020 122cc83ce66e9fab64a27a7ab7ec5605 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.2E-34 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08020 122cc83ce66e9fab64a27a7ab7ec5605 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.2E-34 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08020 122cc83ce66e9fab64a27a7ab7ec5605 253 SUPERFAMILY SSF51735 9 252 4.71E-73 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_08020 122cc83ce66e9fab64a27a7ab7ec5605 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 7.5E-11 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08020 122cc83ce66e9fab64a27a7ab7ec5605 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 7.5E-11 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_08020 122cc83ce66e9fab64a27a7ab7ec5605 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 7.5E-11 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_02425 47f019460f661cb43276cf90ad4d3e36 474 SUPERFAMILY SSF48452 230 395 8.67E-6 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_02425 47f019460f661cb43276cf90ad4d3e36 474 Gene3D G3DSA:1.25.40.10 80 237 2.1E-9 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_02425 47f019460f661cb43276cf90ad4d3e36 474 SUPERFAMILY SSF48452 89 292 9.49E-13 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_02425 47f019460f661cb43276cf90ad4d3e36 474 Pfam PF07219 HemY protein N-terminus 26 132 9.7E-24 T 31-10-2018 IPR010817 HemY, N-terminal DY252_02425 47f019460f661cb43276cf90ad4d3e36 474 Gene3D G3DSA:1.25.40.10 238 403 1.6E-8 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_18715 1209a4002103c29bd35efafdc032ff5a 267 Gene3D G3DSA:3.40.50.12500 25 262 8.2E-69 T 31-10-2018 DY252_18715 1209a4002103c29bd35efafdc032ff5a 267 PIRSF PIRSF015736 13 259 2.4E-76 T 31-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase DY252_07260 1fb6396e168dc8c8360903e238f7c578 410 Gene3D G3DSA:1.10.260.40 27 127 4.7E-21 T 31-10-2018 DY252_07260 1fb6396e168dc8c8360903e238f7c578 410 Pfam PF13413 Helix-turn-helix domain 42 102 7.1E-17 T 31-10-2018 DY252_07260 1fb6396e168dc8c8360903e238f7c578 410 Pfam PF13464 Domain of unknown function (DUF4115) 323 395 2.5E-15 T 31-10-2018 IPR025194 Domain of unknown function DUF4115 DY252_11615 f991f1db99715ebfffe9670d329da634 260 Pfam PF01627 Hpt domain 11 78 4.2E-12 T 31-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DY252_11615 f991f1db99715ebfffe9670d329da634 260 Gene3D G3DSA:3.40.50.2300 140 260 9.5E-10 T 31-10-2018 DY252_11615 f991f1db99715ebfffe9670d329da634 260 Gene3D G3DSA:1.20.120.160 7 139 1.0E-13 T 31-10-2018 IPR036641 HPT domain superfamily GO:0000160 DY252_11615 f991f1db99715ebfffe9670d329da634 260 SUPERFAMILY SSF52172 141 224 5.69E-11 T 31-10-2018 IPR011006 CheY-like superfamily DY252_11615 f991f1db99715ebfffe9670d329da634 260 SUPERFAMILY SSF47226 11 112 1.26E-14 T 31-10-2018 IPR036641 HPT domain superfamily GO:0000160 DY252_11615 f991f1db99715ebfffe9670d329da634 260 Pfam PF00072 Response regulator receiver domain 146 214 3.4E-5 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_02470 25bc01cd4c1d39c977ce1aafb42063ad 269 Pfam PF12697 Alpha/beta hydrolase family 59 251 1.3E-11 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_02470 25bc01cd4c1d39c977ce1aafb42063ad 269 SUPERFAMILY SSF53474 7 256 2.72E-40 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_02470 25bc01cd4c1d39c977ce1aafb42063ad 269 Gene3D G3DSA:3.40.50.1820 13 267 8.6E-62 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_13975 9d37d7e4bfb301a735c7a33a6732a56d 343 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 317 2.3E-42 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_13975 9d37d7e4bfb301a735c7a33a6732a56d 343 Gene3D G3DSA:3.40.190.170 25 343 1.0E-96 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_05660 c47e2f523848e8887c294568a69774fc 171 Pfam PF04985 Phage tail tube protein FII 3 168 1.6E-48 T 31-10-2018 IPR006498 Tail tube protein DY252_05660 c47e2f523848e8887c294568a69774fc 171 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 1 169 1.6E-44 T 31-10-2018 IPR006498 Tail tube protein DY252_21495 754c91219371423d836f898b89259b88 161 SUPERFAMILY SSF52788 2 152 2.49E-52 T 31-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily DY252_21495 754c91219371423d836f898b89259b88 161 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 149 6.0E-43 T 31-10-2018 IPR023485 Phosphotyrosine protein phosphatase I DY252_21495 754c91219371423d836f898b89259b88 161 Gene3D G3DSA:3.40.50.2300 1 158 3.8E-58 T 31-10-2018 DY252_21495 754c91219371423d836f898b89259b88 161 SMART SM00226 2 151 2.1E-51 T 31-10-2018 IPR023485 Phosphotyrosine protein phosphatase I DY252_21495 754c91219371423d836f898b89259b88 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 47 63 2.1E-24 T 31-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DY252_21495 754c91219371423d836f898b89259b88 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 81 96 2.1E-24 T 31-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DY252_21495 754c91219371423d836f898b89259b88 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 2.1E-24 T 31-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DY252_21495 754c91219371423d836f898b89259b88 161 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 123 138 2.1E-24 T 31-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DY252_17765 b8cc5cdd95a762f57ed4caed7aa6f519 456 Gene3D G3DSA:1.10.155.10 1 69 1.0E-7 T 31-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily DY252_17765 b8cc5cdd95a762f57ed4caed7aa6f519 456 Pfam PF01739 CheR methyltransferase, SAM binding domain 71 262 6.8E-59 T 31-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal DY252_17765 b8cc5cdd95a762f57ed4caed7aa6f519 456 Gene3D G3DSA:3.40.50.150 70 268 4.5E-57 T 31-10-2018 DY252_17765 b8cc5cdd95a762f57ed4caed7aa6f519 456 SMART SM00138 4 267 1.0E-97 T 31-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DY252_17765 b8cc5cdd95a762f57ed4caed7aa6f519 456 SUPERFAMILY SSF47757 2 70 4.18E-13 T 31-10-2018 DY252_17765 b8cc5cdd95a762f57ed4caed7aa6f519 456 Pfam PF03705 CheR methyltransferase, all-alpha domain 5 54 6.0E-10 T 31-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DY252_17765 b8cc5cdd95a762f57ed4caed7aa6f519 456 SUPERFAMILY SSF53335 71 266 4.9E-49 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_17765 b8cc5cdd95a762f57ed4caed7aa6f519 456 PRINTS PR00996 Glutamate methyltransferase family signature 64 76 2.1E-38 T 31-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DY252_17765 b8cc5cdd95a762f57ed4caed7aa6f519 456 PRINTS PR00996 Glutamate methyltransferase family signature 226 249 2.1E-38 T 31-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DY252_17765 b8cc5cdd95a762f57ed4caed7aa6f519 456 PRINTS PR00996 Glutamate methyltransferase family signature 26 39 2.1E-38 T 31-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DY252_17765 b8cc5cdd95a762f57ed4caed7aa6f519 456 PRINTS PR00996 Glutamate methyltransferase family signature 207 221 2.1E-38 T 31-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DY252_17765 b8cc5cdd95a762f57ed4caed7aa6f519 456 PRINTS PR00996 Glutamate methyltransferase family signature 139 155 2.1E-38 T 31-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DY252_17765 b8cc5cdd95a762f57ed4caed7aa6f519 456 PRINTS PR00996 Glutamate methyltransferase family signature 104 124 2.1E-38 T 31-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DY252_19560 89896b548dfa7c7146b58c28c9f14082 219 SUPERFAMILY SSF52266 8 205 1.28E-38 T 31-10-2018 DY252_19560 89896b548dfa7c7146b58c28c9f14082 219 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 12 196 5.4E-21 T 31-10-2018 IPR013830 SGNH hydrolase-type esterase domain DY252_19560 89896b548dfa7c7146b58c28c9f14082 219 Gene3D G3DSA:3.40.50.1110 6 212 6.4E-56 T 31-10-2018 IPR036514 SGNH hydrolase superfamily DY252_01675 c1589b7123322044c90ba79261237b49 216 Pfam PF02581 Thiamine monophosphate synthase 50 205 1.0E-17 T 31-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_01675 c1589b7123322044c90ba79261237b49 216 Gene3D G3DSA:3.20.20.70 24 214 6.2E-25 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_01675 c1589b7123322044c90ba79261237b49 216 SUPERFAMILY SSF51391 49 206 7.72E-20 T 31-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DY252_12565 72b3872c86688fd872673acf8a9776b9 401 SUPERFAMILY SSF55781 5 157 2.84E-10 T 31-10-2018 DY252_12565 72b3872c86688fd872673acf8a9776b9 401 Gene3D G3DSA:3.30.450.40 2 172 6.5E-12 T 31-10-2018 IPR029016 GAF-like domain superfamily DY252_12565 72b3872c86688fd872673acf8a9776b9 401 SUPERFAMILY SSF55874 297 385 3.59E-8 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_12565 72b3872c86688fd872673acf8a9776b9 401 Gene3D G3DSA:3.30.565.10 264 386 6.4E-21 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_15830 5e0b2d27dc225f0cd8d2d8d82a12944b 311 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 160 289 4.4E-15 T 31-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 DY252_15830 5e0b2d27dc225f0cd8d2d8d82a12944b 311 Gene3D G3DSA:1.10.530.10 154 294 1.2E-13 T 31-10-2018 DY252_10025 505ae3a8b0579ff18d613705032cd094 88 SUPERFAMILY SSF46966 3 73 3.6E-5 T 31-10-2018 DY252_18355 51969214aed2c03f5b8617bf10b4f174 491 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 21 167 4.2E-42 T 31-10-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 DY252_18355 51969214aed2c03f5b8617bf10b4f174 491 Hamap MF_01932 AMP nucleosidase [amn]. 11 491 57.358 T 31-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 DY252_18355 51969214aed2c03f5b8617bf10b4f174 491 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 19 491 1.5E-190 T 31-10-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 DY252_18355 51969214aed2c03f5b8617bf10b4f174 491 Gene3D G3DSA:3.40.50.1580 179 491 4.8E-105 T 31-10-2018 DY252_18355 51969214aed2c03f5b8617bf10b4f174 491 SUPERFAMILY SSF53167 16 491 1.7E-144 T 31-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DY252_18355 51969214aed2c03f5b8617bf10b4f174 491 Pfam PF01048 Phosphorylase superfamily 277 438 1.8E-13 T 31-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DY252_18355 51969214aed2c03f5b8617bf10b4f174 491 Gene3D G3DSA:3.30.1730.10 13 173 6.3E-43 T 31-10-2018 IPR037109 AMP nucleoside phosphorylase, N-terminal domain superfamily KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 DY252_12080 08ea78991f41aab8839915ebaa287cac 888 SUPERFAMILY SSF46589 821 885 1.1E-14 T 31-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DY252_12080 08ea78991f41aab8839915ebaa287cac 888 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 568 3.1E-214 T 31-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_12080 08ea78991f41aab8839915ebaa287cac 888 Gene3D G3DSA:1.10.730.10 2 745 0.0 T 31-10-2018 DY252_12080 08ea78991f41aab8839915ebaa287cac 888 Gene3D G3DSA:1.10.287.380 814 886 1.7E-17 T 31-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DY252_12080 08ea78991f41aab8839915ebaa287cac 888 TIGRFAM TIGR00422 valS: valine--tRNA ligase 3 869 0.0 T 31-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DY252_12080 08ea78991f41aab8839915ebaa287cac 888 Gene3D G3DSA:3.90.740.10 175 343 0.0 T 31-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DY252_12080 08ea78991f41aab8839915ebaa287cac 888 Hamap MF_02004 Valine--tRNA ligase [valS]. 2 886 15.959 T 31-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DY252_12080 08ea78991f41aab8839915ebaa287cac 888 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 821 885 1.2E-16 T 31-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 DY252_12080 08ea78991f41aab8839915ebaa287cac 888 Gene3D G3DSA:3.40.50.620 22 530 0.0 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_12080 08ea78991f41aab8839915ebaa287cac 888 SUPERFAMILY SSF50677 191 343 1.96E-60 T 31-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DY252_12080 08ea78991f41aab8839915ebaa287cac 888 Pfam PF08264 Anticodon-binding domain of tRNA 612 759 6.0E-38 T 31-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DY252_12080 08ea78991f41aab8839915ebaa287cac 888 PRINTS PR00986 Valyl-tRNA synthetase signature 347 360 1.7E-36 T 31-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DY252_12080 08ea78991f41aab8839915ebaa287cac 888 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 1.7E-36 T 31-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DY252_12080 08ea78991f41aab8839915ebaa287cac 888 PRINTS PR00986 Valyl-tRNA synthetase signature 480 498 1.7E-36 T 31-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DY252_12080 08ea78991f41aab8839915ebaa287cac 888 PRINTS PR00986 Valyl-tRNA synthetase signature 449 470 1.7E-36 T 31-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DY252_12080 08ea78991f41aab8839915ebaa287cac 888 PRINTS PR00986 Valyl-tRNA synthetase signature 231 248 1.7E-36 T 31-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DY252_12080 08ea78991f41aab8839915ebaa287cac 888 SUPERFAMILY SSF47323 582 834 3.18E-56 T 31-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_12080 08ea78991f41aab8839915ebaa287cac 888 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 31-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DY252_12080 08ea78991f41aab8839915ebaa287cac 888 SUPERFAMILY SSF52374 3 579 1.69E-139 T 31-10-2018 DY252_01015 f81947985e57080b1cf7edbcd1109fdd 463 Gene3D G3DSA:2.30.170.30 7 54 5.2E-19 T 31-10-2018 DY252_01015 f81947985e57080b1cf7edbcd1109fdd 463 Gene3D G3DSA:3.20.20.70 142 453 8.7E-146 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_01015 f81947985e57080b1cf7edbcd1109fdd 463 Gene3D G3DSA:1.10.220.70 55 141 8.4E-34 T 31-10-2018 DY252_01015 f81947985e57080b1cf7edbcd1109fdd 463 PIRSF PIRSF018788 5 458 2.3E-234 T 31-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 DY252_01015 f81947985e57080b1cf7edbcd1109fdd 463 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 445 1.4E-222 T 31-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 DY252_15115 f0244b251785b135db93c89f683da7ce 462 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 410 2.0E-52 T 31-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DY252_15115 f0244b251785b135db93c89f683da7ce 462 Pfam PF01554 MatE 258 394 2.6E-17 T 31-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DY252_15115 f0244b251785b135db93c89f683da7ce 462 Pfam PF01554 MatE 25 184 2.7E-23 T 31-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DY252_15115 f0244b251785b135db93c89f683da7ce 462 PIRSF PIRSF006603 1 448 1.5E-72 T 31-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DY252_16065 13bbcbc734f8e66355870f9d3acd6839 265 Gene3D G3DSA:1.25.40.10 9 228 1.5E-23 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_16065 13bbcbc734f8e66355870f9d3acd6839 265 SUPERFAMILY SSF81901 17 200 8.5E-19 T 31-10-2018 DY252_20675 9cf6a68c2c7b06ddf50a295549d82414 310 SUPERFAMILY SSF51735 2 141 2.24E-43 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_20675 9cf6a68c2c7b06ddf50a295549d82414 310 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 169 175 - T 31-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 DY252_20675 9cf6a68c2c7b06ddf50a295549d82414 310 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 1 309 36.721 T 31-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 DY252_20675 9cf6a68c2c7b06ddf50a295549d82414 310 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 6.5E-38 T 31-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DY252_20675 9cf6a68c2c7b06ddf50a295549d82414 310 PRINTS PR00086 L-lactate dehydrogenase signature 137 155 6.5E-38 T 31-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DY252_20675 9cf6a68c2c7b06ddf50a295549d82414 310 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 6.5E-38 T 31-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DY252_20675 9cf6a68c2c7b06ddf50a295549d82414 310 PRINTS PR00086 L-lactate dehydrogenase signature 167 180 6.5E-38 T 31-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DY252_20675 9cf6a68c2c7b06ddf50a295549d82414 310 PRINTS PR00086 L-lactate dehydrogenase signature 113 133 6.5E-38 T 31-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DY252_20675 9cf6a68c2c7b06ddf50a295549d82414 310 SUPERFAMILY SSF56327 140 308 9.22E-48 T 31-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DY252_20675 9cf6a68c2c7b06ddf50a295549d82414 310 Gene3D G3DSA:3.90.110.10 142 309 1.1E-51 T 31-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DY252_20675 9cf6a68c2c7b06ddf50a295549d82414 310 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 142 307 1.2E-23 T 31-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 DY252_20675 9cf6a68c2c7b06ddf50a295549d82414 310 Gene3D G3DSA:3.40.50.720 1 141 1.1E-47 T 31-10-2018 DY252_20675 9cf6a68c2c7b06ddf50a295549d82414 310 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 139 2.5E-35 T 31-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_20675 9cf6a68c2c7b06ddf50a295549d82414 310 PIRSF PIRSF000102 1 310 6.4E-94 T 31-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DY252_20675 9cf6a68c2c7b06ddf50a295549d82414 310 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 5 303 1.9E-105 T 31-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 DY252_13270 dde94d6e65b06440c810eac889118365 700 Pfam PF03772 Competence protein 238 520 1.1E-62 T 31-10-2018 IPR004477 ComEC/Rec2-related protein DY252_13270 dde94d6e65b06440c810eac889118365 700 Pfam PF13567 Domain of unknown function (DUF4131) 42 192 2.1E-9 T 31-10-2018 IPR025405 Domain of unknown function DUF4131 DY252_13270 dde94d6e65b06440c810eac889118365 700 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 259 452 4.6E-26 T 31-10-2018 IPR004477 ComEC/Rec2-related protein DY252_13475 66aaaabe67f9d0b217ba249dee9e0eda 220 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 132 150 - T 31-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13475 66aaaabe67f9d0b217ba249dee9e0eda 220 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 27 175 2.9E-59 T 31-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13475 66aaaabe67f9d0b217ba249dee9e0eda 220 Gene3D G3DSA:1.10.10.1590 17 92 7.1E-29 T 31-10-2018 DY252_13475 66aaaabe67f9d0b217ba249dee9e0eda 220 SUPERFAMILY SSF52833 19 188 8.95E-60 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_13475 66aaaabe67f9d0b217ba249dee9e0eda 220 Gene3D G3DSA:3.40.30.10 93 195 8.8E-35 T 31-10-2018 DY252_13475 66aaaabe67f9d0b217ba249dee9e0eda 220 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 28 175 7.2E-64 T 31-10-2018 DY252_13475 66aaaabe67f9d0b217ba249dee9e0eda 220 PIRSF PIRSF000216 3 217 2.2E-78 T 31-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_12585 158fa5f9a78dc5d7f92b61393ab0bae2 374 Gene3D G3DSA:3.40.190.10 53 354 4.0E-120 T 31-10-2018 DY252_12585 158fa5f9a78dc5d7f92b61393ab0bae2 374 Gene3D G3DSA:3.40.190.10 150 367 4.0E-120 T 31-10-2018 DY252_12585 158fa5f9a78dc5d7f92b61393ab0bae2 374 Pfam PF01547 Bacterial extracellular solute-binding protein 64 308 1.7E-10 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_12585 158fa5f9a78dc5d7f92b61393ab0bae2 374 SUPERFAMILY SSF53850 53 330 3.51E-39 T 31-10-2018 DY252_05380 9d8a677a3e6f2d6523e5b0dfc5ba3d40 178 Gene3D G3DSA:1.20.1290.10 2 178 3.8E-68 T 31-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DY252_05380 9d8a677a3e6f2d6523e5b0dfc5ba3d40 178 SUPERFAMILY SSF69118 5 176 7.85E-48 T 31-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DY252_05380 9d8a677a3e6f2d6523e5b0dfc5ba3d40 178 Hamap MF_01676 Alkyl hydroperoxide reductase AhpD [ahpD]. 1 178 81.851 T 31-10-2018 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DY252_05380 9d8a677a3e6f2d6523e5b0dfc5ba3d40 178 Pfam PF02627 Carboxymuconolactone decarboxylase family 99 177 7.2E-16 T 31-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DY252_05380 9d8a677a3e6f2d6523e5b0dfc5ba3d40 178 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 113 161 1.2E-17 T 31-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DY252_05380 9d8a677a3e6f2d6523e5b0dfc5ba3d40 178 TIGRFAM TIGR00777 ahpD: alkylhydroperoxidase, AhpD family 3 177 2.8E-70 T 31-10-2018 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DY252_08800 64cf3d5fa4a0107a98553914aa81fabe 445 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 441 37.568 T 31-10-2018 IPR006698 Uncharacterised protein family UPF0229 DY252_08800 64cf3d5fa4a0107a98553914aa81fabe 445 Pfam PF04285 Protein of unknown function (DUF444) 4 438 5.8E-173 T 31-10-2018 IPR006698 Uncharacterised protein family UPF0229 DY252_10475 f7670a6170b7f8a538bdd3475f3c39f7 108 Gene3D G3DSA:1.10.3730.20 1 108 2.1E-33 T 31-10-2018 DY252_10475 f7670a6170b7f8a538bdd3475f3c39f7 108 Pfam PF00893 Small Multidrug Resistance protein 3 94 1.5E-28 T 31-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DY252_10475 f7670a6170b7f8a538bdd3475f3c39f7 108 SUPERFAMILY SSF103481 6 103 2.48E-19 T 31-10-2018 DY252_06830 1222ae3fcc836eb841957d621faa8877 346 Gene3D G3DSA:3.40.50.2000 166 335 2.4E-8 T 31-10-2018 DY252_06830 1222ae3fcc836eb841957d621faa8877 346 SUPERFAMILY SSF53756 204 330 9.84E-9 T 31-10-2018 DY252_13040 f48deb574c44b790431029d707081749 181 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 29 162 6.9E-17 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_02465 19dd656443a9b57ec03c36b24b9dd6d3 111 Pfam PF00355 Rieske [2Fe-2S] domain 10 93 3.7E-12 T 31-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DY252_02465 19dd656443a9b57ec03c36b24b9dd6d3 111 Gene3D G3DSA:2.102.10.10 4 111 9.6E-18 T 31-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DY252_02465 19dd656443a9b57ec03c36b24b9dd6d3 111 SUPERFAMILY SSF50022 9 110 1.01E-23 T 31-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DY252_14405 2f2b0a5b76f0219fbc5f061c70415532 320 PRINTS PR01374 Gram-negative bacterial tonB protein signature 135 145 1.1E-5 T 31-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DY252_14405 2f2b0a5b76f0219fbc5f061c70415532 320 PRINTS PR01374 Gram-negative bacterial tonB protein signature 257 275 1.1E-5 T 31-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DY252_14405 2f2b0a5b76f0219fbc5f061c70415532 320 PRINTS PR01374 Gram-negative bacterial tonB protein signature 236 257 1.1E-5 T 31-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DY252_14405 2f2b0a5b76f0219fbc5f061c70415532 320 PRINTS PR01374 Gram-negative bacterial tonB protein signature 276 293 1.1E-5 T 31-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DY252_14405 2f2b0a5b76f0219fbc5f061c70415532 320 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 243 318 5.4E-17 T 31-10-2018 IPR006260 TonB/TolA, C-terminal DY252_14405 2f2b0a5b76f0219fbc5f061c70415532 320 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 242 319 1.7E-18 T 31-10-2018 IPR037682 TonB, C-terminal GO:0055085 DY252_14405 2f2b0a5b76f0219fbc5f061c70415532 320 SUPERFAMILY SSF74653 238 310 9.42E-16 T 31-10-2018 DY252_14405 2f2b0a5b76f0219fbc5f061c70415532 320 Gene3D G3DSA:3.30.1150.10 155 320 3.8E-24 T 31-10-2018 DY252_02180 31484ca36a42103e65c7276288867785 252 Pfam PF01177 Asp/Glu/Hydantoin racemase 4 215 1.5E-6 T 31-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DY252_02180 31484ca36a42103e65c7276288867785 252 Gene3D G3DSA:3.40.50.12500 2 251 6.9E-73 T 31-10-2018 DY252_13725 250cd78365ce03e9cefe8fdf9ae2da07 161 Pfam PF01152 Bacterial-like globin 31 118 8.5E-9 T 31-10-2018 IPR001486 Truncated hemoglobin GO:0019825 DY252_13725 250cd78365ce03e9cefe8fdf9ae2da07 161 SUPERFAMILY SSF46458 30 137 8.31E-29 T 31-10-2018 IPR009050 Globin-like superfamily DY252_13725 250cd78365ce03e9cefe8fdf9ae2da07 161 Gene3D G3DSA:1.10.490.10 23 143 6.4E-42 T 31-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 DY252_11995 d53ecdfc13591e3f60e08bb48ad45ceb 225 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 196 8.6E-48 T 31-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 DY252_11995 d53ecdfc13591e3f60e08bb48ad45ceb 225 Gene3D G3DSA:1.10.1760.20 1 195 2.2E-37 T 31-10-2018 DY252_18315 b82e0254347d42d87754576e98091f07 150 SUPERFAMILY SSF53927 4 148 2.17E-49 T 31-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DY252_18315 b82e0254347d42d87754576e98091f07 150 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 7 150 44.403 T 31-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 DY252_18315 b82e0254347d42d87754576e98091f07 150 Gene3D G3DSA:3.40.140.10 1 150 3.6E-52 T 31-10-2018 DY252_18315 b82e0254347d42d87754576e98091f07 150 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 91 - T 31-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DY252_18315 b82e0254347d42d87754576e98091f07 150 Pfam PF14437 MafB19-like deaminase 2 149 7.1E-25 T 31-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 DY252_18770 28960758f320870a1d05b4438ca286e5 450 SUPERFAMILY SSF75304 7 443 2.75E-118 T 31-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DY252_18770 28960758f320870a1d05b4438ca286e5 450 Pfam PF01425 Amidase 28 433 2.7E-87 T 31-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DY252_18770 28960758f320870a1d05b4438ca286e5 450 Gene3D G3DSA:3.90.1300.10 9 447 7.3E-122 T 31-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DY252_09735 edabfd53d9f29f1a7ec16d93cfbbcd17 179 Gene3D G3DSA:1.20.1280.20 104 179 1.3E-27 T 31-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DY252_09735 edabfd53d9f29f1a7ec16d93cfbbcd17 179 Gene3D G3DSA:1.10.10.10 1 102 2.1E-42 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_09735 edabfd53d9f29f1a7ec16d93cfbbcd17 179 Pfam PF14557 Putative AphA-like transcriptional regulator 2 177 1.6E-50 T 31-10-2018 IPR029434 Putative transcriptional regulator DY252_09735 edabfd53d9f29f1a7ec16d93cfbbcd17 179 SUPERFAMILY SSF46785 13 176 4.08E-14 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_03955 dcb85c0027fcb1c9215797b4e48dc51c 267 Gene3D G3DSA:3.40.50.300 20 265 8.6E-66 T 31-10-2018 DY252_03955 dcb85c0027fcb1c9215797b4e48dc51c 267 Pfam PF00005 ABC transporter 37 191 4.1E-31 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_03955 dcb85c0027fcb1c9215797b4e48dc51c 267 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 20 267 4.4E-123 T 31-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 DY252_03955 dcb85c0027fcb1c9215797b4e48dc51c 267 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_03955 dcb85c0027fcb1c9215797b4e48dc51c 267 SMART SM00382 44 238 2.1E-9 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_03955 dcb85c0027fcb1c9215797b4e48dc51c 267 SUPERFAMILY SSF52540 20 254 1.13E-58 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_06545 e55c2e794761552ee4645bab2194db5a 250 SUPERFAMILY SSF47090 192 245 1.88E-10 T 31-10-2018 IPR036365 PGBD-like superfamily DY252_06545 e55c2e794761552ee4645bab2194db5a 250 Gene3D G3DSA:1.10.101.10 172 248 6.5E-7 T 31-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DY252_06545 e55c2e794761552ee4645bab2194db5a 250 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 29 156 7.8E-32 T 31-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DY252_06545 e55c2e794761552ee4645bab2194db5a 250 Gene3D G3DSA:3.40.80.10 7 168 5.5E-48 T 31-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DY252_06545 e55c2e794761552ee4645bab2194db5a 250 SMART SM00644 19 156 2.3E-34 T 31-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DY252_06545 e55c2e794761552ee4645bab2194db5a 250 SUPERFAMILY SSF55846 17 172 4.32E-55 T 31-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DY252_22095 be85ffd383fbfd2ad680d5be266d9705 152 SMART SM00347 26 126 2.1E-16 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_22095 be85ffd383fbfd2ad680d5be266d9705 152 Pfam PF12802 MarR family 31 89 7.3E-11 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_22095 be85ffd383fbfd2ad680d5be266d9705 152 SUPERFAMILY SSF46785 6 140 2.39E-28 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_22095 be85ffd383fbfd2ad680d5be266d9705 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 1.2E-8 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_22095 be85ffd383fbfd2ad680d5be266d9705 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 1.2E-8 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_22095 be85ffd383fbfd2ad680d5be266d9705 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 1.2E-8 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_22095 be85ffd383fbfd2ad680d5be266d9705 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 1.2E-8 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_22095 be85ffd383fbfd2ad680d5be266d9705 152 Gene3D G3DSA:1.10.10.10 2 141 3.6E-30 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_17795 37e85ee35b0810cf5cd9ed489545303a 61 Pfam PF12073 Protein of unknown function (DUF3553) 5 54 3.8E-21 T 31-10-2018 IPR021938 Protein of unknown function DUF3553 DY252_07240 9e95b58e3b26e52407a5a119e0314e3f 252 Gene3D G3DSA:3.40.50.150 16 251 5.4E-71 T 31-10-2018 DY252_07240 9e95b58e3b26e52407a5a119e0314e3f 252 SUPERFAMILY SSF53335 18 251 4.52E-45 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_07240 9e95b58e3b26e52407a5a119e0314e3f 252 Pfam PF08241 Methyltransferase domain 73 167 1.3E-20 T 31-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DY252_07240 9e95b58e3b26e52407a5a119e0314e3f 252 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 245 1.9E-85 T 31-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 DY252_07240 9e95b58e3b26e52407a5a119e0314e3f 252 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 16 251 38.684 T 31-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 DY252_14195 6755cec41b3e306b4779f8ed5b4b10fb 498 SUPERFAMILY SSF52540 267 481 1.01E-47 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_14195 6755cec41b3e306b4779f8ed5b4b10fb 498 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_14195 6755cec41b3e306b4779f8ed5b4b10fb 498 Gene3D G3DSA:3.40.50.300 260 497 9.3E-48 T 31-10-2018 DY252_14195 6755cec41b3e306b4779f8ed5b4b10fb 498 SUPERFAMILY SSF52540 4 228 3.09E-58 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_14195 6755cec41b3e306b4779f8ed5b4b10fb 498 Gene3D G3DSA:3.40.50.300 2 238 7.7E-57 T 31-10-2018 DY252_14195 6755cec41b3e306b4779f8ed5b4b10fb 498 SMART SM00382 283 478 0.029 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_14195 6755cec41b3e306b4779f8ed5b4b10fb 498 SMART SM00382 30 218 7.8E-10 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_14195 6755cec41b3e306b4779f8ed5b4b10fb 498 Pfam PF00005 ABC transporter 21 170 5.7E-30 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_14195 6755cec41b3e306b4779f8ed5b4b10fb 498 Pfam PF00005 ABC transporter 274 428 2.6E-21 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_07880 0fb053e211f1a3d913883966a10a0662 386 SUPERFAMILY SSF161098 10 264 2.75E-41 T 31-10-2018 IPR035906 MetI-like superfamily DY252_07880 0fb053e211f1a3d913883966a10a0662 386 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 262 3.9E-11 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_07880 0fb053e211f1a3d913883966a10a0662 386 Gene3D G3DSA:1.10.3720.10 9 270 1.5E-36 T 31-10-2018 IPR035906 MetI-like superfamily DY252_18955 6bf996775b9aad325a97ecbba0dc2871 530 SUPERFAMILY SSF56235 6 529 5.87E-135 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_18955 6bf996775b9aad325a97ecbba0dc2871 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 125 144 4.4E-26 T 31-10-2018 DY252_18955 6bf996775b9aad325a97ecbba0dc2871 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 223 239 4.4E-26 T 31-10-2018 DY252_18955 6bf996775b9aad325a97ecbba0dc2871 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 34 59 4.4E-26 T 31-10-2018 DY252_18955 6bf996775b9aad325a97ecbba0dc2871 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 399 414 4.4E-26 T 31-10-2018 DY252_18955 6bf996775b9aad325a97ecbba0dc2871 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 252 271 4.4E-26 T 31-10-2018 DY252_18955 6bf996775b9aad325a97ecbba0dc2871 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 344 362 4.4E-26 T 31-10-2018 DY252_18955 6bf996775b9aad325a97ecbba0dc2871 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 368 386 4.4E-26 T 31-10-2018 DY252_18955 6bf996775b9aad325a97ecbba0dc2871 530 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 426 443 4.4E-26 T 31-10-2018 DY252_18955 6bf996775b9aad325a97ecbba0dc2871 530 Gene3D G3DSA:3.60.20.40 344 530 3.0E-53 T 31-10-2018 DY252_18955 6bf996775b9aad325a97ecbba0dc2871 530 Gene3D G3DSA:1.10.246.130 240 342 1.3E-16 T 31-10-2018 DY252_18955 6bf996775b9aad325a97ecbba0dc2871 530 Pfam PF01019 Gamma-glutamyltranspeptidase 27 525 5.4E-113 T 31-10-2018 DY252_06870 57c70c77d869fa2b5cf4a21ad010de5f 247 Pfam PF12118 SprA-related family 97 203 1.3E-18 T 31-10-2018 IPR021973 SprA-related family DY252_16180 7e5ee7e4a185993e00b16a2e8b4e2e4f 315 Gene3D G3DSA:1.10.3720.10 86 310 3.2E-24 T 31-10-2018 IPR035906 MetI-like superfamily DY252_16180 7e5ee7e4a185993e00b16a2e8b4e2e4f 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 314 6.3E-43 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_16180 7e5ee7e4a185993e00b16a2e8b4e2e4f 315 SUPERFAMILY SSF161098 90 297 8.34E-21 T 31-10-2018 IPR035906 MetI-like superfamily DY252_01050 08d3ec771d02b2ae800f019f5c7d7591 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 31-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_01050 08d3ec771d02b2ae800f019f5c7d7591 89 Pfam PF00312 Ribosomal protein S15 8 88 2.5E-40 T 31-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_01050 08d3ec771d02b2ae800f019f5c7d7591 89 SMART SM01387 8 88 4.0E-55 T 31-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_01050 08d3ec771d02b2ae800f019f5c7d7591 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 12 88 8.0E-23 T 31-10-2018 DY252_01050 08d3ec771d02b2ae800f019f5c7d7591 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 2.7E-40 T 31-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_01050 08d3ec771d02b2ae800f019f5c7d7591 89 SUPERFAMILY SSF47060 3 89 1.5E-37 T 31-10-2018 IPR009068 S15/NS1, RNA-binding DY252_01050 08d3ec771d02b2ae800f019f5c7d7591 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 23.218 T 31-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_01050 08d3ec771d02b2ae800f019f5c7d7591 89 Gene3D G3DSA:1.10.287.10 1 89 4.8E-38 T 31-10-2018 DY252_00670 328c19b2d591ba17af6c78e5b1d7a6fc 154 Pfam PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ 8 147 4.1E-61 T 31-10-2018 IPR019884 YtoQ family protein DY252_00670 328c19b2d591ba17af6c78e5b1d7a6fc 154 TIGRFAM TIGR03646 YtoQ_fam: YtoQ family protein 5 147 1.1E-62 T 31-10-2018 IPR019884 YtoQ family protein DY252_11340 dc31b8f777e9cc5849d8582909a57f23 234 SUPERFAMILY SSF55073 72 221 5.76E-44 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_11340 dc31b8f777e9cc5849d8582909a57f23 234 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 63 223 4.1E-42 T 31-10-2018 IPR000160 GGDEF domain DY252_11340 dc31b8f777e9cc5849d8582909a57f23 234 Gene3D G3DSA:3.30.70.270 60 229 6.4E-51 T 31-10-2018 DY252_11340 dc31b8f777e9cc5849d8582909a57f23 234 SMART SM00267 56 227 3.6E-47 T 31-10-2018 IPR000160 GGDEF domain DY252_11340 dc31b8f777e9cc5849d8582909a57f23 234 Pfam PF00990 Diguanylate cyclase, GGDEF domain 69 222 1.5E-40 T 31-10-2018 IPR000160 GGDEF domain DY252_21980 dccc178fb6e2add417dfc56bc6a80ff9 358 SUPERFAMILY SSF53659 1 353 2.3E-118 T 31-10-2018 DY252_21980 dccc178fb6e2add417dfc56bc6a80ff9 358 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 31-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DY252_21980 dccc178fb6e2add417dfc56bc6a80ff9 358 SMART SM01329 5 349 9.0E-177 T 31-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DY252_21980 dccc178fb6e2add417dfc56bc6a80ff9 358 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 349 2.3E-88 T 31-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DY252_21980 dccc178fb6e2add417dfc56bc6a80ff9 358 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 1 353 1.1E-175 T 31-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 DY252_21980 dccc178fb6e2add417dfc56bc6a80ff9 358 Gene3D G3DSA:3.40.718.10 1 355 7.5E-137 T 31-10-2018 DY252_10675 8c1eafdc1f34c4368fda9d80cff59dfe 307 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 36 82 2.1E-12 T 31-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DY252_10675 8c1eafdc1f34c4368fda9d80cff59dfe 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 123 304 5.0E-27 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_10675 8c1eafdc1f34c4368fda9d80cff59dfe 307 SUPERFAMILY SSF161098 100 287 3.01E-27 T 31-10-2018 IPR035906 MetI-like superfamily DY252_10675 8c1eafdc1f34c4368fda9d80cff59dfe 307 Gene3D G3DSA:1.10.3720.10 95 301 8.4E-19 T 31-10-2018 IPR035906 MetI-like superfamily DY252_17350 06b43fecb5b87661282430afb2ae5257 58 PIRSF PIRSF036466 1 55 8.6E-20 T 31-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 DY252_17350 06b43fecb5b87661282430afb2ae5257 58 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 9.0E-15 T 31-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 DY252_17350 06b43fecb5b87661282430afb2ae5257 58 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 48 18.618 T 31-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 DY252_13945 2d6f833d3e2ed9451d1fd90cf0d18c7b 284 Gene3D G3DSA:3.40.1080.10 6 268 3.5E-66 T 31-10-2018 DY252_13945 2d6f833d3e2ed9451d1fd90cf0d18c7b 284 Pfam PF01144 Coenzyme A transferase 6 225 1.5E-23 T 31-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DY252_13945 2d6f833d3e2ed9451d1fd90cf0d18c7b 284 SUPERFAMILY SSF100950 4 271 1.94E-76 T 31-10-2018 IPR037171 NagB/RpiA transferase-like DY252_13945 2d6f833d3e2ed9451d1fd90cf0d18c7b 284 SMART SM00882 5 226 5.5E-37 T 31-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DY252_13945 2d6f833d3e2ed9451d1fd90cf0d18c7b 284 Gene3D G3DSA:3.30.30.40 119 155 3.5E-66 T 31-10-2018 DY252_05390 ca3468a5339b9ecf2f6395094b0fb6bd 146 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 7 138 6.5E-14 T 31-10-2018 IPR009936 Protein of unknown function DUF1468 DY252_17815 f3e766f223f8fe25213e30555ac98da7 126 Pfam PF01986 Domain of unknown function DUF123 18 109 4.0E-22 T 31-10-2018 IPR002837 Protein of unknown function DUF123 DY252_06690 c2eb4bf1490974c0499bda6650347f30 90 Pfam PF13467 Ribbon-helix-helix domain 6 66 9.5E-25 T 31-10-2018 IPR027373 Ribbon-helix-helix domain DY252_06690 c2eb4bf1490974c0499bda6650347f30 90 Gene3D G3DSA:1.10.3990.20 2 89 6.1E-15 T 31-10-2018 IPR038268 Ribbon-helix-helix domain superfamily DY252_02195 f0750f687e3845593c25be3aa1d65746 314 PIRSF PIRSF017082 1 313 3.1E-80 T 31-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DY252_02195 f0750f687e3845593c25be3aa1d65746 314 SUPERFAMILY SSF53850 97 275 1.9E-10 T 31-10-2018 DY252_02195 f0750f687e3845593c25be3aa1d65746 314 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 46 311 1.9E-42 T 31-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DY252_02195 f0750f687e3845593c25be3aa1d65746 314 Gene3D G3DSA:3.40.190.10 121 242 8.1E-77 T 31-10-2018 DY252_02195 f0750f687e3845593c25be3aa1d65746 314 Gene3D G3DSA:3.40.190.150 26 304 8.1E-77 T 31-10-2018 DY252_15975 d37721763e08b38acc2d5700b947ba51 298 SMART SM01130 4 292 5.8E-93 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_15975 d37721763e08b38acc2d5700b947ba51 298 SUPERFAMILY SSF51569 3 290 6.28E-87 T 31-10-2018 DY252_15975 d37721763e08b38acc2d5700b947ba51 298 PIRSF PIRSF001365 1 297 8.3E-81 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_15975 d37721763e08b38acc2d5700b947ba51 298 Pfam PF00701 Dihydrodipicolinate synthetase family 6 290 5.2E-64 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_15975 d37721763e08b38acc2d5700b947ba51 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.1E-14 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_15975 d37721763e08b38acc2d5700b947ba51 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 1.1E-14 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_15975 d37721763e08b38acc2d5700b947ba51 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.1E-14 T 31-10-2018 IPR002220 DapA-like GO:0016829 DY252_15975 d37721763e08b38acc2d5700b947ba51 298 Gene3D G3DSA:3.20.20.70 1 295 5.5E-88 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_07215 de4776cebc9a36b2efb520048fc14296 127 SUPERFAMILY SSF54593 4 126 3.16E-22 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_07215 de4776cebc9a36b2efb520048fc14296 127 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 113 2.5E-11 T 31-10-2018 DY252_07215 de4776cebc9a36b2efb520048fc14296 127 Gene3D G3DSA:3.10.180.10 5 126 2.2E-14 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_13330 49ad1f4e68ea3df1785ad58688060ec5 192 Pfam PF03938 Outer membrane protein (OmpH-like) 21 174 5.1E-25 T 31-10-2018 IPR005632 Chaperone protein Skp GO:0051082 DY252_13330 49ad1f4e68ea3df1785ad58688060ec5 192 SUPERFAMILY SSF111384 37 176 1.83E-21 T 31-10-2018 DY252_13330 49ad1f4e68ea3df1785ad58688060ec5 192 Gene3D G3DSA:3.30.910.20 28 191 2.3E-28 T 31-10-2018 IPR024930 Skp domain superfamily DY252_13330 49ad1f4e68ea3df1785ad58688060ec5 192 SMART SM00935 18 178 3.9E-25 T 31-10-2018 IPR005632 Chaperone protein Skp GO:0051082 DY252_03360 3a80d5fb1938318f0184b7863d05f4c9 382 SUPERFAMILY SSF54631 230 375 7.08E-29 T 31-10-2018 DY252_03360 3a80d5fb1938318f0184b7863d05f4c9 382 Gene3D G3DSA:3.10.580.10 221 380 2.2E-30 T 31-10-2018 DY252_03360 3a80d5fb1938318f0184b7863d05f4c9 382 Pfam PF04982 HPP family 51 171 2.0E-34 T 31-10-2018 IPR007065 HPP DY252_03360 3a80d5fb1938318f0184b7863d05f4c9 382 SMART SM00116 330 375 0.012 T 31-10-2018 IPR000644 CBS domain DY252_03360 3a80d5fb1938318f0184b7863d05f4c9 382 SMART SM00116 245 293 1.5E-6 T 31-10-2018 IPR000644 CBS domain DY252_03360 3a80d5fb1938318f0184b7863d05f4c9 382 Pfam PF00571 CBS domain 238 291 2.7E-11 T 31-10-2018 IPR000644 CBS domain DY252_03360 3a80d5fb1938318f0184b7863d05f4c9 382 Pfam PF00571 CBS domain 323 375 9.0E-10 T 31-10-2018 IPR000644 CBS domain DY252_12440 1e82d27610813a686a522e7ebba1f50a 270 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 127 137 - T 31-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DY252_12440 1e82d27610813a686a522e7ebba1f50a 270 Pfam PF01026 TatD related DNase 6 256 5.3E-81 T 31-10-2018 IPR001130 TatD family GO:0016788 DY252_12440 1e82d27610813a686a522e7ebba1f50a 270 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 5 256 1.1E-85 T 31-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 DY252_12440 1e82d27610813a686a522e7ebba1f50a 270 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 193 209 - T 31-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DY252_12440 1e82d27610813a686a522e7ebba1f50a 270 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 5 13 - T 31-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DY252_12440 1e82d27610813a686a522e7ebba1f50a 270 SUPERFAMILY SSF51556 5 256 6.98E-89 T 31-10-2018 IPR032466 Metal-dependent hydrolase DY252_12440 1e82d27610813a686a522e7ebba1f50a 270 Gene3D G3DSA:3.20.20.140 1 260 4.7E-93 T 31-10-2018 DY252_12440 1e82d27610813a686a522e7ebba1f50a 270 PIRSF PIRSF005902 1 260 5.3E-83 T 31-10-2018 IPR001130 TatD family GO:0016788 DY252_21540 96ddd6b554a0725215ab9661f3169d80 202 Gene3D G3DSA:1.10.340.30 12 192 2.9E-76 T 31-10-2018 DY252_21540 96ddd6b554a0725215ab9661f3169d80 202 Pfam PF03352 Methyladenine glycosylase 16 187 1.0E-72 T 31-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 DY252_21540 96ddd6b554a0725215ab9661f3169d80 202 SUPERFAMILY SSF48150 12 191 1.07E-72 T 31-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DY252_09930 a2dfc6a4460fc9bb31fcf547ea664764 1161 SUPERFAMILY SSF52518 21 211 1.35E-17 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_09930 a2dfc6a4460fc9bb31fcf547ea664764 1161 Gene3D G3DSA:3.40.50.970 9 221 1.5E-24 T 31-10-2018 DY252_09930 a2dfc6a4460fc9bb31fcf547ea664764 1161 SUPERFAMILY SSF52518 434 617 4.06E-14 T 31-10-2018 IPR029061 Thiamin diphosphate-binding fold DY252_09930 a2dfc6a4460fc9bb31fcf547ea664764 1161 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 454 543 7.6E-7 T 31-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DY252_09930 a2dfc6a4460fc9bb31fcf547ea664764 1161 SUPERFAMILY SSF52922 267 397 9.2E-10 T 31-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DY252_09930 a2dfc6a4460fc9bb31fcf547ea664764 1161 Gene3D G3DSA:3.40.920.10 721 929 3.9E-18 T 31-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 DY252_09930 a2dfc6a4460fc9bb31fcf547ea664764 1161 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 731 918 2.6E-23 T 31-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 DY252_09930 a2dfc6a4460fc9bb31fcf547ea664764 1161 SUPERFAMILY SSF53323 723 934 2.48E-30 T 31-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 DY252_14565 3ff18ea9e6ea351ac93f8954be2b63ae 313 Pfam PF12146 Serine aminopeptidase, S33 25 286 3.3E-44 T 31-10-2018 IPR022742 Serine aminopeptidase, S33 DY252_14565 3ff18ea9e6ea351ac93f8954be2b63ae 313 Gene3D G3DSA:3.40.50.1820 3 307 9.8E-43 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_14565 3ff18ea9e6ea351ac93f8954be2b63ae 313 SUPERFAMILY SSF53474 7 301 1.09E-35 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_00485 2319c059c5b1121de262d08625c02bd6 322 Gene3D G3DSA:1.20.1530.20 5 309 4.0E-30 T 31-10-2018 IPR038770 Sodium/solute symporter superfamily DY252_00485 2319c059c5b1121de262d08625c02bd6 322 Pfam PF01758 Sodium Bile acid symporter family 40 213 1.3E-15 T 31-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 DY252_07160 eb7cbc0f2e9cac1fdef3a954796ddc6c 237 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 236 58.166 T 31-10-2018 IPR005224 Sugar fermentation stimulation protein DY252_07160 eb7cbc0f2e9cac1fdef3a954796ddc6c 237 Gene3D G3DSA:2.40.50.580 1 79 9.4E-28 T 31-10-2018 DY252_07160 eb7cbc0f2e9cac1fdef3a954796ddc6c 237 Gene3D G3DSA:3.40.1350.60 80 235 9.1E-54 T 31-10-2018 DY252_07160 eb7cbc0f2e9cac1fdef3a954796ddc6c 237 Pfam PF03749 Sugar fermentation stimulation protein 13 227 7.5E-79 T 31-10-2018 IPR005224 Sugar fermentation stimulation protein DY252_07160 eb7cbc0f2e9cac1fdef3a954796ddc6c 237 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 5 234 8.4E-74 T 31-10-2018 IPR005224 Sugar fermentation stimulation protein DY252_20425 4eaad45b109e8a479e9e157b529e71d5 295 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 34 292 7.3E-65 T 31-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 DY252_20425 4eaad45b109e8a479e9e157b529e71d5 295 SUPERFAMILY SSF53335 9 293 1.5E-77 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_20425 4eaad45b109e8a479e9e157b529e71d5 295 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 280 38.597 T 31-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 DY252_20425 4eaad45b109e8a479e9e157b529e71d5 295 Gene3D G3DSA:3.40.50.150 1 295 2.5E-98 T 31-10-2018 DY252_18335 de4bb29c9842d316c735a75fac7eac59 193 Pfam PF13560 Helix-turn-helix domain 12 53 4.4E-9 T 31-10-2018 DY252_18335 de4bb29c9842d316c735a75fac7eac59 193 SMART SM00530 16 71 0.0038 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_18335 de4bb29c9842d316c735a75fac7eac59 193 SUPERFAMILY SSF47413 11 60 5.63E-10 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_18335 de4bb29c9842d316c735a75fac7eac59 193 Gene3D G3DSA:1.10.260.40 6 65 5.4E-11 T 31-10-2018 DY252_17165 064ab683fa5d57c9b072d0d5b4dced22 526 SUPERFAMILY SSF103473 13 516 4.84E-60 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_17165 064ab683fa5d57c9b072d0d5b4dced22 526 Pfam PF07690 Major Facilitator Superfamily 29 423 4.6E-47 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_17165 064ab683fa5d57c9b072d0d5b4dced22 526 Gene3D G3DSA:1.20.1720.10 25 228 3.6E-35 T 31-10-2018 DY252_17165 064ab683fa5d57c9b072d0d5b4dced22 526 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 26 509 2.9E-135 T 31-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DY252_14110 bf5599098b6c77cdea94df088521b9c3 604 Pfam PF00128 Alpha amylase, catalytic domain 98 289 3.6E-15 T 31-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DY252_14110 bf5599098b6c77cdea94df088521b9c3 604 PIRSF PIRSF003059 14 583 1.3E-165 T 31-10-2018 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related DY252_14110 bf5599098b6c77cdea94df088521b9c3 604 Gene3D G3DSA:3.90.400.10 149 222 8.0E-139 T 31-10-2018 DY252_14110 bf5599098b6c77cdea94df088521b9c3 604 SUPERFAMILY SSF51445 60 545 4.37E-83 T 31-10-2018 IPR017853 Glycoside hydrolase superfamily DY252_14110 bf5599098b6c77cdea94df088521b9c3 604 Gene3D G3DSA:3.20.20.80 67 473 8.0E-139 T 31-10-2018 DY252_14110 bf5599098b6c77cdea94df088521b9c3 604 SMART SM00642 64 471 1.6E-4 T 31-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DY252_06470 2b93d110b66377b47ec1f5ab10419736 379 Pfam PF01098 Cell cycle protein 31 375 3.6E-76 T 31-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_06470 2b93d110b66377b47ec1f5ab10419736 379 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 29 375 6.5E-102 T 31-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_07340 3f8abf9d02dd8b9597ab6e76be9d5ed8 143 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 58 141 8.5E-37 T 31-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 DY252_14380 4e136349df9630eaee02e4b5c11eca74 440 SUPERFAMILY SSF58104 145 434 6.1E-61 T 31-10-2018 DY252_14380 4e136349df9630eaee02e4b5c11eca74 440 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 255 409 1.3E-33 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_14380 4e136349df9630eaee02e4b5c11eca74 440 Gene3D G3DSA:1.10.287.950 151 439 2.4E-58 T 31-10-2018 DY252_14380 4e136349df9630eaee02e4b5c11eca74 440 SMART SM00283 181 435 8.5E-45 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_14380 4e136349df9630eaee02e4b5c11eca74 440 SUPERFAMILY SSF46458 4 149 1.97E-31 T 31-10-2018 IPR009050 Globin-like superfamily DY252_14380 4e136349df9630eaee02e4b5c11eca74 440 Pfam PF11563 Protoglobin 4 157 1.1E-32 T 31-10-2018 DY252_14380 4e136349df9630eaee02e4b5c11eca74 440 Gene3D G3DSA:1.10.490.10 2 149 1.6E-39 T 31-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 DY252_02765 38badf49eabb138958a7c4e6f00dd176 198 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 1 175 3.1E-44 T 31-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 DY252_02765 38badf49eabb138958a7c4e6f00dd176 198 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 1 178 23.394 T 31-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 DY252_02765 38badf49eabb138958a7c4e6f00dd176 198 SUPERFAMILY SSF55144 1 176 9.24E-38 T 31-10-2018 IPR009097 Cyclic phosphodiesterase DY252_02765 38badf49eabb138958a7c4e6f00dd176 198 Pfam PF13563 2'-5' RNA ligase superfamily 29 161 5.7E-16 T 31-10-2018 DY252_02765 38badf49eabb138958a7c4e6f00dd176 198 Gene3D G3DSA:3.90.1140.10 1 177 3.9E-41 T 31-10-2018 DY252_10275 ca483e9488c942e4f8f05ef8ea2ccee8 931 Pfam PF00005 ABC transporter 31 178 5.5E-27 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_10275 ca483e9488c942e4f8f05ef8ea2ccee8 931 Pfam PF12698 ABC-2 family transporter protein 582 923 1.6E-45 T 31-10-2018 DY252_10275 ca483e9488c942e4f8f05ef8ea2ccee8 931 SUPERFAMILY SSF52540 278 499 2.61E-59 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_10275 ca483e9488c942e4f8f05ef8ea2ccee8 931 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_10275 ca483e9488c942e4f8f05ef8ea2ccee8 931 SMART SM00382 304 495 1.3E-11 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_10275 ca483e9488c942e4f8f05ef8ea2ccee8 931 SMART SM00382 40 228 3.9E-9 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_10275 ca483e9488c942e4f8f05ef8ea2ccee8 931 Gene3D G3DSA:3.40.50.300 2 253 2.4E-62 T 31-10-2018 DY252_10275 ca483e9488c942e4f8f05ef8ea2ccee8 931 Gene3D G3DSA:3.40.50.300 270 518 6.3E-62 T 31-10-2018 DY252_10275 ca483e9488c942e4f8f05ef8ea2ccee8 931 Pfam PF00005 ABC transporter 296 439 9.2E-27 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_10275 ca483e9488c942e4f8f05ef8ea2ccee8 931 SUPERFAMILY SSF52540 15 242 1.66E-57 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_15825 537deed0fdb2bfd63c763e4be69aa448 236 SUPERFAMILY SSF55729 31 200 8.54E-35 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_15825 537deed0fdb2bfd63c763e4be69aa448 236 Gene3D G3DSA:3.40.630.30 17 236 7.4E-60 T 31-10-2018 DY252_15825 537deed0fdb2bfd63c763e4be69aa448 236 Pfam PF13302 Acetyltransferase (GNAT) domain 58 177 1.0E-10 T 31-10-2018 IPR000182 GNAT domain DY252_17745 8bf0544fcc352984192beeca64046281 142 Pfam PF02050 Flagellar FliJ protein 17 133 1.8E-6 T 31-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 DY252_20005 e571c9a386e92b6146992cea0ba53731 407 Gene3D G3DSA:3.40.50.150 127 405 4.8E-88 T 31-10-2018 DY252_20005 e571c9a386e92b6146992cea0ba53731 407 SUPERFAMILY SSF53335 128 402 3.59E-68 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_20005 e571c9a386e92b6146992cea0ba53731 407 Pfam PF02353 Mycolic acid cyclopropane synthetase 122 385 5.0E-79 T 31-10-2018 DY252_20005 e571c9a386e92b6146992cea0ba53731 407 PIRSF PIRSF003085 5 405 2.0E-101 T 31-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 DY252_08835 9f99d517bb55e93b3f333ce3a94f37ba 329 Gene3D G3DSA:3.40.190.170 21 328 1.3E-76 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_08835 9f99d517bb55e93b3f333ce3a94f37ba 329 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 312 1.7E-57 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_18340 f0048aa13cc5a6beb52b47a2e6769b30 392 Pfam PF07690 Major Facilitator Superfamily 14 323 2.8E-27 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_18340 f0048aa13cc5a6beb52b47a2e6769b30 392 Gene3D G3DSA:1.20.1250.20 195 381 1.9E-11 T 31-10-2018 DY252_18340 f0048aa13cc5a6beb52b47a2e6769b30 392 SUPERFAMILY SSF103473 6 380 2.49E-43 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_18340 f0048aa13cc5a6beb52b47a2e6769b30 392 Gene3D G3DSA:1.20.1250.20 4 190 5.5E-27 T 31-10-2018 DY252_06595 b8738de6a40d51d95fefc67bd563fc9e 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 428 4.9E-110 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_06595 b8738de6a40d51d95fefc67bd563fc9e 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 423 9.5E-80 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_06595 b8738de6a40d51d95fefc67bd563fc9e 433 PIRSF PIRSF006066 5 433 5.0E-87 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_08090 08892f5f45ec61526076b19f7cb79bad 448 Pfam PF00909 Ammonium Transporter Family 29 427 6.9E-58 T 31-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 DY252_08090 08892f5f45ec61526076b19f7cb79bad 448 Gene3D G3DSA:1.10.3430.10 9 440 7.7E-76 T 31-10-2018 IPR029020 Ammonium/urea transporter DY252_08090 08892f5f45ec61526076b19f7cb79bad 448 SUPERFAMILY SSF111352 29 409 1.01E-58 T 31-10-2018 DY252_02225 892ebf5964114087918e4dbea134a8f3 578 Gene3D G3DSA:2.70.98.10 97 472 1.3E-147 T 31-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DY252_02225 892ebf5964114087918e4dbea134a8f3 578 SUPERFAMILY SSF81296 471 576 5.18E-15 T 31-10-2018 IPR014756 Immunoglobulin E-set DY252_02225 892ebf5964114087918e4dbea134a8f3 578 PIRSF PIRSF006281 55 578 5.0E-165 T 31-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD DY252_02225 892ebf5964114087918e4dbea134a8f3 578 Gene3D G3DSA:2.60.40.10 473 577 3.7E-10 T 31-10-2018 IPR013783 Immunoglobulin-like fold DY252_02225 892ebf5964114087918e4dbea134a8f3 578 SUPERFAMILY SSF74650 98 465 8.47E-137 T 31-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DY252_02225 892ebf5964114087918e4dbea134a8f3 578 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 98 576 3.7E-167 T 31-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 DY252_00295 66ee6a43768742a084bcab8b83f414d8 143 SMART SM00422 2 71 7.3E-32 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00295 66ee6a43768742a084bcab8b83f414d8 143 Pfam PF09278 MerR, DNA binding 45 108 1.9E-19 T 31-10-2018 IPR015358 Transcription regulator MerR, DNA binding DY252_00295 66ee6a43768742a084bcab8b83f414d8 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 7.6E-14 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00295 66ee6a43768742a084bcab8b83f414d8 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 7.6E-14 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00295 66ee6a43768742a084bcab8b83f414d8 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 7.6E-14 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00295 66ee6a43768742a084bcab8b83f414d8 143 Pfam PF00376 MerR family regulatory protein 3 40 1.2E-14 T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_00295 66ee6a43768742a084bcab8b83f414d8 143 SUPERFAMILY SSF46955 2 127 1.28E-37 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_00295 66ee6a43768742a084bcab8b83f414d8 143 Gene3D G3DSA:1.10.1660.10 1 126 1.1E-36 T 31-10-2018 DY252_00295 66ee6a43768742a084bcab8b83f414d8 143 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 31-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DY252_12325 f0c770410c94837d292e9aa6ff8c30a2 695 Pfam PF17191 RecG wedge domain 16 173 2.1E-6 T 31-10-2018 IPR033454 RecG, wedge domain DY252_12325 f0c770410c94837d292e9aa6ff8c30a2 695 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 34 658 7.6E-206 T 31-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 DY252_12325 f0c770410c94837d292e9aa6ff8c30a2 695 Gene3D G3DSA:3.40.50.300 213 443 7.9E-80 T 31-10-2018 DY252_12325 f0c770410c94837d292e9aa6ff8c30a2 695 SUPERFAMILY SSF50249 6 177 2.4E-22 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_12325 f0c770410c94837d292e9aa6ff8c30a2 695 SUPERFAMILY SSF52540 290 644 1.85E-39 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12325 f0c770410c94837d292e9aa6ff8c30a2 695 Gene3D G3DSA:2.40.50.140 50 145 4.9E-9 T 31-10-2018 DY252_12325 f0c770410c94837d292e9aa6ff8c30a2 695 Gene3D G3DSA:3.40.50.300 451 623 6.1E-49 T 31-10-2018 DY252_12325 f0c770410c94837d292e9aa6ff8c30a2 695 Pfam PF00271 Helicase conserved C-terminal domain 473 581 3.8E-16 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_12325 f0c770410c94837d292e9aa6ff8c30a2 695 Pfam PF00270 DEAD/DEAH box helicase 271 425 3.9E-17 T 31-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DY252_12325 f0c770410c94837d292e9aa6ff8c30a2 695 SUPERFAMILY SSF52540 181 447 7.57E-58 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12325 f0c770410c94837d292e9aa6ff8c30a2 695 SMART SM00487 263 453 5.5E-28 T 31-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DY252_12325 f0c770410c94837d292e9aa6ff8c30a2 695 SMART SM00490 498 582 3.2E-19 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_18100 da11822d70b64d2ffd36d2e6c5f698dc 165 Pfam PF04314 Copper chaperone PCu(A)C 27 135 1.3E-39 T 31-10-2018 IPR007410 Copper chaperone PCuAC DY252_18100 da11822d70b64d2ffd36d2e6c5f698dc 165 Gene3D G3DSA:2.60.40.1890 31 145 3.8E-35 T 31-10-2018 IPR036182 Copper chaperone PCuAC superfamily DY252_18100 da11822d70b64d2ffd36d2e6c5f698dc 165 SUPERFAMILY SSF110087 3 141 6.41E-45 T 31-10-2018 IPR036182 Copper chaperone PCuAC superfamily DY252_14265 6d87eda012089ebf1a978e28eb56f9a0 326 Pfam PF12833 Helix-turn-helix domain 243 324 1.3E-22 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_14265 6d87eda012089ebf1a978e28eb56f9a0 326 SUPERFAMILY SSF46689 273 324 2.56E-5 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_14265 6d87eda012089ebf1a978e28eb56f9a0 326 SMART SM00342 237 322 4.4E-18 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_14265 6d87eda012089ebf1a978e28eb56f9a0 326 Gene3D G3DSA:1.10.10.60 221 326 9.3E-31 T 31-10-2018 DY252_14265 6d87eda012089ebf1a978e28eb56f9a0 326 Pfam PF14525 AraC-binding-like domain 37 195 9.4E-8 T 31-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like DY252_14265 6d87eda012089ebf1a978e28eb56f9a0 326 SUPERFAMILY SSF46689 221 271 8.84E-6 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_15910 6c039a2ddd1e2b2a34242600b920e0d1 293 SUPERFAMILY SSF52096 139 292 5.87E-10 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_15910 6c039a2ddd1e2b2a34242600b920e0d1 293 Gene3D G3DSA:3.90.226.10 133 293 8.5E-7 T 31-10-2018 DY252_15280 be13cf1f902ac15257e2be37762a3299 257 Pfam PF02405 Permease MlaE 42 252 4.9E-81 T 31-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 DY252_15280 be13cf1f902ac15257e2be37762a3299 257 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 32 255 1.8E-78 T 31-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria DY252_10070 2fb0a51866c76bcfe53be3737b6cba50 353 Gene3D G3DSA:1.10.8.60 185 259 4.1E-28 T 31-10-2018 DY252_10070 2fb0a51866c76bcfe53be3737b6cba50 353 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 2.4E-33 T 31-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 DY252_10070 2fb0a51866c76bcfe53be3737b6cba50 353 SUPERFAMILY SSF52540 23 252 1.25E-51 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_10070 2fb0a51866c76bcfe53be3737b6cba50 353 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 353 170.799 T 31-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 DY252_10070 2fb0a51866c76bcfe53be3737b6cba50 353 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 12 238 9.4E-114 T 31-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 DY252_10070 2fb0a51866c76bcfe53be3737b6cba50 353 Gene3D G3DSA:3.40.50.300 22 184 1.6E-38 T 31-10-2018 DY252_10070 2fb0a51866c76bcfe53be3737b6cba50 353 SUPERFAMILY SSF46785 259 333 3.27E-25 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_10070 2fb0a51866c76bcfe53be3737b6cba50 353 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 8.9E-139 T 31-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 DY252_10070 2fb0a51866c76bcfe53be3737b6cba50 353 SMART SM00382 54 181 2.2E-11 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_10070 2fb0a51866c76bcfe53be3737b6cba50 353 Gene3D G3DSA:1.10.10.10 260 337 2.0E-32 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_10070 2fb0a51866c76bcfe53be3737b6cba50 353 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 254 335 3.0E-29 T 31-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 DY252_08160 d2514393157ca8ae9e59c6dad43c54c9 69 SMART SM00357 3 69 1.1E-21 T 31-10-2018 IPR011129 Cold shock domain GO:0003676 DY252_08160 d2514393157ca8ae9e59c6dad43c54c9 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 31-10-2018 IPR019844 Cold-shock conserved site DY252_08160 d2514393157ca8ae9e59c6dad43c54c9 69 PRINTS PR00050 Cold shock protein signature 40 58 2.2E-9 T 31-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DY252_08160 d2514393157ca8ae9e59c6dad43c54c9 69 PRINTS PR00050 Cold shock protein signature 4 19 2.2E-9 T 31-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DY252_08160 d2514393157ca8ae9e59c6dad43c54c9 69 PRINTS PR00050 Cold shock protein signature 25 34 2.2E-9 T 31-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DY252_08160 d2514393157ca8ae9e59c6dad43c54c9 69 PIRSF PIRSF002599 1 68 2.7E-19 T 31-10-2018 IPR012156 Cold shock, CspA GO:0003676 DY252_08160 d2514393157ca8ae9e59c6dad43c54c9 69 SUPERFAMILY SSF50249 1 67 2.79E-21 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_08160 d2514393157ca8ae9e59c6dad43c54c9 69 Gene3D G3DSA:2.40.50.140 1 67 2.2E-22 T 31-10-2018 DY252_08160 d2514393157ca8ae9e59c6dad43c54c9 69 Pfam PF00313 'Cold-shock' DNA-binding domain 3 67 2.7E-19 T 31-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DY252_02920 732d3ab65f4620c30d53e8152b26636f 296 SUPERFAMILY SSF103481 188 287 5.62E-11 T 31-10-2018 DY252_02920 732d3ab65f4620c30d53e8152b26636f 296 Pfam PF00892 EamA-like transporter family 14 144 1.9E-18 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_02920 732d3ab65f4620c30d53e8152b26636f 296 Pfam PF00892 EamA-like transporter family 156 282 3.2E-7 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_02920 732d3ab65f4620c30d53e8152b26636f 296 SUPERFAMILY SSF103481 47 147 1.12E-16 T 31-10-2018 DY252_04870 18c5c68041e7342203880958a52c1e50 458 SMART SM00448 9 128 0.0073 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_04870 18c5c68041e7342203880958a52c1e50 458 Gene3D G3DSA:2.160.20.100 307 443 5.8E-29 T 31-10-2018 DY252_04870 18c5c68041e7342203880958a52c1e50 458 Gene3D G3DSA:3.40.50.2300 1 139 2.0E-14 T 31-10-2018 DY252_04870 18c5c68041e7342203880958a52c1e50 458 SUPERFAMILY SSF141571 318 431 3.4E-29 T 31-10-2018 DY252_04870 18c5c68041e7342203880958a52c1e50 458 Pfam PF00072 Response regulator receiver domain 11 128 2.2E-8 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_04870 18c5c68041e7342203880958a52c1e50 458 SUPERFAMILY SSF52172 7 137 7.12E-15 T 31-10-2018 IPR011006 CheY-like superfamily DY252_04870 18c5c68041e7342203880958a52c1e50 458 Pfam PF00805 Pentapeptide repeats (8 copies) 341 373 8.1E-5 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_04870 18c5c68041e7342203880958a52c1e50 458 Pfam PF00805 Pentapeptide repeats (8 copies) 396 431 6.5E-10 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_20590 141ce191ebc04fd0bc35ba65bcb0a841 281 Gene3D G3DSA:3.40.50.300 3 265 2.1E-60 T 31-10-2018 DY252_20590 141ce191ebc04fd0bc35ba65bcb0a841 281 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 4 249 5.1E-90 T 31-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 DY252_20590 141ce191ebc04fd0bc35ba65bcb0a841 281 Pfam PF00005 ABC transporter 20 180 4.1E-30 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_20590 141ce191ebc04fd0bc35ba65bcb0a841 281 SMART SM00382 29 236 4.4E-11 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_20590 141ce191ebc04fd0bc35ba65bcb0a841 281 SUPERFAMILY SSF52540 4 242 8.7E-57 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_20590 141ce191ebc04fd0bc35ba65bcb0a841 281 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_05355 cdb3df0bb36c9debf5e015ababff3a71 170 Pfam PF10649 Protein of unknown function (DUF2478) 3 159 3.2E-44 T 31-10-2018 IPR018912 Protein of unknown function DUF2478 DY252_03665 1672bd958a4888c209e1a64aeeef7be6 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 93 111 - T 31-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DY252_03665 1672bd958a4888c209e1a64aeeef7be6 332 SUPERFAMILY SSF51395 4 303 3.48E-68 T 31-10-2018 DY252_03665 1672bd958a4888c209e1a64aeeef7be6 332 PIRSF PIRSF006621 1 325 3.8E-75 T 31-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DY252_03665 1672bd958a4888c209e1a64aeeef7be6 332 Gene3D G3DSA:3.20.20.70 1 242 1.0E-76 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_03665 1672bd958a4888c209e1a64aeeef7be6 332 Gene3D G3DSA:1.20.225.30 248 317 4.2E-9 T 31-10-2018 DY252_03665 1672bd958a4888c209e1a64aeeef7be6 332 Pfam PF01207 Dihydrouridine synthase (Dus) 5 314 1.3E-70 T 31-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DY252_03665 1672bd958a4888c209e1a64aeeef7be6 332 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 9 316 48.564 T 31-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 DY252_00680 bc2143f25b02d51f7c0f85dc5ade3d74 232 SUPERFAMILY SSF48498 85 205 5.19E-19 T 31-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DY252_00680 bc2143f25b02d51f7c0f85dc5ade3d74 232 SUPERFAMILY SSF46689 11 82 1.85E-15 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_00680 bc2143f25b02d51f7c0f85dc5ade3d74 232 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 61 - T 31-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DY252_00680 bc2143f25b02d51f7c0f85dc5ade3d74 232 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 62 4.0E-11 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_00680 bc2143f25b02d51f7c0f85dc5ade3d74 232 Gene3D G3DSA:1.10.357.10 2 206 7.5E-49 T 31-10-2018 DY252_00680 bc2143f25b02d51f7c0f85dc5ade3d74 232 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 87 202 6.7E-15 T 31-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal DY252_00890 0ecfdc688c2568ce2a9785ccceb2bd36 194 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 2 189 33.318 T 31-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 DY252_00890 0ecfdc688c2568ce2a9785ccceb2bd36 194 Pfam PF13580 SIS domain 12 145 3.9E-23 T 31-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DY252_00890 0ecfdc688c2568ce2a9785ccceb2bd36 194 SUPERFAMILY SSF53697 6 190 3.78E-47 T 31-10-2018 DY252_00890 0ecfdc688c2568ce2a9785ccceb2bd36 194 Gene3D G3DSA:3.40.50.10490 2 192 2.4E-62 T 31-10-2018 DY252_14245 863b8bf6ca5b0ac0135142e3bcfb9f55 177 Pfam PF07681 DoxX 38 123 1.8E-9 T 31-10-2018 IPR032808 DoxX family DY252_10100 e3ba64d75f195c7963b36baee5804253 164 ProSitePatterns PS01068 OmpA-like domain. 95 139 - T 31-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 DY252_10100 e3ba64d75f195c7963b36baee5804253 164 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 1 163 32.774 T 31-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 DY252_10100 e3ba64d75f195c7963b36baee5804253 164 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 60 162 1.0E-44 T 31-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 DY252_10100 e3ba64d75f195c7963b36baee5804253 164 SUPERFAMILY SSF103088 49 159 1.7E-37 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_10100 e3ba64d75f195c7963b36baee5804253 164 Gene3D G3DSA:3.30.1330.60 33 162 5.3E-41 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_10100 e3ba64d75f195c7963b36baee5804253 164 PRINTS PR01021 OMPA domain signature 108 124 7.6E-19 T 31-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DY252_10100 e3ba64d75f195c7963b36baee5804253 164 PRINTS PR01021 OMPA domain signature 93 108 7.6E-19 T 31-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DY252_10100 e3ba64d75f195c7963b36baee5804253 164 PRINTS PR01021 OMPA domain signature 63 85 7.6E-19 T 31-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DY252_10100 e3ba64d75f195c7963b36baee5804253 164 Pfam PF00691 OmpA family 62 157 7.4E-24 T 31-10-2018 IPR006665 OmpA-like domain DY252_21775 65c4154e8b348581b7c9aff2afbf2955 422 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 5 412 1.9E-114 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_21775 65c4154e8b348581b7c9aff2afbf2955 422 PIRSF PIRSF006066 1 422 7.4E-141 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_21775 65c4154e8b348581b7c9aff2afbf2955 422 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 14 417 2.5E-122 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_18610 b2619412bb887cdf7305e22e78194cd9 173 SUPERFAMILY SSF55021 6 68 6.54E-8 T 31-10-2018 DY252_18610 b2619412bb887cdf7305e22e78194cd9 173 Gene3D G3DSA:3.30.70.260 3 83 2.9E-5 T 31-10-2018 DY252_18610 b2619412bb887cdf7305e22e78194cd9 173 Gene3D G3DSA:3.30.70.260 89 172 1.4E-9 T 31-10-2018 DY252_18610 b2619412bb887cdf7305e22e78194cd9 173 SUPERFAMILY SSF55021 93 167 1.28E-9 T 31-10-2018 DY252_05800 2180c695448bd11eaffa322d70d9a244 639 Pfam PF00263 Bacterial type II and III secretion system protein 395 549 4.5E-31 T 31-10-2018 IPR004846 Type II/III secretion system GO:0009306 DY252_05800 2180c695448bd11eaffa322d70d9a244 639 SUPERFAMILY SSF48452 54 195 1.8E-16 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_05800 2180c695448bd11eaffa322d70d9a244 639 Gene3D G3DSA:1.25.40.10 39 132 1.7E-7 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_05800 2180c695448bd11eaffa322d70d9a244 639 PRINTS PR00811 Bacterial general secretion pathway protein D signature 387 411 1.4E-5 T 31-10-2018 IPR001775 GspD/PilQ family DY252_05800 2180c695448bd11eaffa322d70d9a244 639 PRINTS PR00811 Bacterial general secretion pathway protein D signature 516 534 1.4E-5 T 31-10-2018 IPR001775 GspD/PilQ family DY252_05800 2180c695448bd11eaffa322d70d9a244 639 Gene3D G3DSA:1.25.40.10 133 227 1.3E-8 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_19225 c1bfa88d2889cff68d258d4f6fb1390a 276 Gene3D G3DSA:1.10.3720.10 76 276 1.4E-35 T 31-10-2018 IPR035906 MetI-like superfamily DY252_19225 c1bfa88d2889cff68d258d4f6fb1390a 276 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 33 275 4.0E-91 T 31-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 DY252_19225 c1bfa88d2889cff68d258d4f6fb1390a 276 SUPERFAMILY SSF161098 82 267 9.29E-36 T 31-10-2018 IPR035906 MetI-like superfamily DY252_19225 c1bfa88d2889cff68d258d4f6fb1390a 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 274 1.1E-22 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_00540 abcab991a14781e35b91d346519988ac 368 Pfam PF13776 Domain of unknown function (DUF4172) 4 79 1.2E-18 T 31-10-2018 IPR025230 Domain of unknown function DUF4172 DY252_00540 abcab991a14781e35b91d346519988ac 368 Gene3D G3DSA:1.10.3290.10 44 285 3.9E-43 T 31-10-2018 IPR036597 Fido-like domain superfamily DY252_00540 abcab991a14781e35b91d346519988ac 368 SUPERFAMILY SSF46785 293 367 2.18E-6 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_00540 abcab991a14781e35b91d346519988ac 368 Gene3D G3DSA:1.10.10.10 286 368 4.2E-5 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_00540 abcab991a14781e35b91d346519988ac 368 SUPERFAMILY SSF140931 101 286 2.49E-32 T 31-10-2018 IPR036597 Fido-like domain superfamily DY252_00540 abcab991a14781e35b91d346519988ac 368 Pfam PF02661 Fic/DOC family 117 225 8.3E-16 T 31-10-2018 IPR003812 Fido domain DY252_05885 711cdb4b0a0423f309222635f624cd23 172 Pfam PF10649 Protein of unknown function (DUF2478) 3 161 2.4E-49 T 31-10-2018 IPR018912 Protein of unknown function DUF2478 DY252_04040 e4c862e35a3c6a941db5f92636c7989d 321 Gene3D G3DSA:1.10.3660.10 186 292 6.1E-35 T 31-10-2018 DY252_04040 e4c862e35a3c6a941db5f92636c7989d 321 SUPERFAMILY SSF48179 182 292 2.04E-33 T 31-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DY252_04040 e4c862e35a3c6a941db5f92636c7989d 321 Pfam PF02153 Prephenate dehydrogenase 25 282 6.4E-72 T 31-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 DY252_04040 e4c862e35a3c6a941db5f92636c7989d 321 Gene3D G3DSA:3.40.50.720 10 185 3.1E-55 T 31-10-2018 DY252_04040 e4c862e35a3c6a941db5f92636c7989d 321 SUPERFAMILY SSF51735 13 178 7.19E-48 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_11265 20b344974cf5e26492fc64c4a74c21a3 451 Gene3D G3DSA:2.30.30.40 369 433 5.0E-7 T 31-10-2018 DY252_11265 20b344974cf5e26492fc64c4a74c21a3 451 SMART SM00271 7 64 5.2E-17 T 31-10-2018 IPR001623 DnaJ domain DY252_11265 20b344974cf5e26492fc64c4a74c21a3 451 Gene3D G3DSA:1.10.287.110 2 68 1.9E-19 T 31-10-2018 IPR036869 Chaperone J-domain superfamily DY252_11265 20b344974cf5e26492fc64c4a74c21a3 451 Pfam PF00226 DnaJ domain 9 64 1.1E-17 T 31-10-2018 IPR001623 DnaJ domain DY252_11265 20b344974cf5e26492fc64c4a74c21a3 451 SUPERFAMILY SSF46565 9 64 1.7E-18 T 31-10-2018 IPR036869 Chaperone J-domain superfamily DY252_11265 20b344974cf5e26492fc64c4a74c21a3 451 PRINTS PR00625 DnaJ domain signature 28 43 1.7E-15 T 31-10-2018 IPR001623 DnaJ domain DY252_11265 20b344974cf5e26492fc64c4a74c21a3 451 PRINTS PR00625 DnaJ domain signature 44 64 1.7E-15 T 31-10-2018 IPR001623 DnaJ domain DY252_11265 20b344974cf5e26492fc64c4a74c21a3 451 PRINTS PR00625 DnaJ domain signature 10 28 1.7E-15 T 31-10-2018 IPR001623 DnaJ domain DY252_21985 e9b8942c1c68d67721c51741f0e1249d 430 SUPERFAMILY SSF82544 15 429 4.18E-145 T 31-10-2018 DY252_21985 e9b8942c1c68d67721c51741f0e1249d 430 Gene3D G3DSA:3.40.50.10180 44 262 3.7E-133 T 31-10-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 DY252_21985 e9b8942c1c68d67721c51741f0e1249d 430 Pfam PF05161 MOFRL family 318 423 4.2E-33 T 31-10-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 DY252_21985 e9b8942c1c68d67721c51741f0e1249d 430 Pfam PF13660 Domain of unknown function (DUF4147) 21 235 1.9E-79 T 31-10-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 DY252_21985 e9b8942c1c68d67721c51741f0e1249d 430 Gene3D G3DSA:3.40.1480.10 263 424 3.7E-133 T 31-10-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily DY252_16070 893517d6ac585455693b90860a1a4143 212 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 9 200 25.881 T 31-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 DY252_16070 893517d6ac585455693b90860a1a4143 212 Gene3D G3DSA:3.90.550.10 10 204 8.5E-47 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_16070 893517d6ac585455693b90860a1a4143 212 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 13 198 1.2E-49 T 31-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 DY252_16070 893517d6ac585455693b90860a1a4143 212 Pfam PF12804 MobA-like NTP transferase domain 13 165 1.7E-34 T 31-10-2018 IPR025877 MobA-like NTP transferase DY252_16070 893517d6ac585455693b90860a1a4143 212 SUPERFAMILY SSF53448 11 200 4.96E-30 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_04055 6fa350bffef55a774a4834bd19448176 324 SUPERFAMILY SSF103481 236 315 6.15E-14 T 31-10-2018 DY252_04055 6fa350bffef55a774a4834bd19448176 324 SUPERFAMILY SSF103481 56 159 3.4E-12 T 31-10-2018 DY252_04055 6fa350bffef55a774a4834bd19448176 324 Pfam PF00892 EamA-like transporter family 22 156 2.1E-19 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_04055 6fa350bffef55a774a4834bd19448176 324 Pfam PF00892 EamA-like transporter family 171 312 5.2E-24 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_21805 b54c8972421fa91549c4109ef61a760f 485 Pfam PF13598 Domain of unknown function (DUF4139) 188 481 4.4E-13 T 31-10-2018 IPR037291 Domain of unknown function DUF4139 DY252_00160 0f80bba3d94b4984b1e6b128b9a9d8c3 463 Pfam PF01425 Amidase 27 446 3.2E-79 T 31-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DY252_00160 0f80bba3d94b4984b1e6b128b9a9d8c3 463 Gene3D G3DSA:3.90.1300.10 2 462 9.2E-112 T 31-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DY252_00160 0f80bba3d94b4984b1e6b128b9a9d8c3 463 SUPERFAMILY SSF75304 6 455 3.92E-109 T 31-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DY252_00160 0f80bba3d94b4984b1e6b128b9a9d8c3 463 ProSitePatterns PS00571 Amidases signature. 154 185 - T 31-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 DY252_03000 6fc99c9044c7eedc3aa6445cff098230 277 Gene3D G3DSA:3.40.190.10 49 251 5.6E-21 T 31-10-2018 DY252_03000 6fc99c9044c7eedc3aa6445cff098230 277 SUPERFAMILY SSF53850 47 263 5.72E-29 T 31-10-2018 DY252_03000 6fc99c9044c7eedc3aa6445cff098230 277 Gene3D G3DSA:3.40.190.10 130 226 5.6E-21 T 31-10-2018 DY252_03000 6fc99c9044c7eedc3aa6445cff098230 277 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 49 236 1.1E-15 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_14755 43b6adc77d4b9d948cf137932a28a05e 113 Gene3D G3DSA:2.60.300.12 6 113 3.4E-32 T 31-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DY252_14755 43b6adc77d4b9d948cf137932a28a05e 113 SUPERFAMILY SSF89360 5 99 1.24E-25 T 31-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DY252_14755 43b6adc77d4b9d948cf137932a28a05e 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 7 109 3.3E-16 T 31-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DY252_14755 43b6adc77d4b9d948cf137932a28a05e 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 31-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 DY252_14755 43b6adc77d4b9d948cf137932a28a05e 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 7 113 1.2E-32 T 31-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 DY252_15540 53944719a8a85a29e18e9608d9ec1ca9 303 SUPERFAMILY SSF51735 1 294 5.48E-92 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_15540 53944719a8a85a29e18e9608d9ec1ca9 303 Pfam PF04321 RmlD substrate binding domain 3 293 2.9E-101 T 31-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 DY252_15540 53944719a8a85a29e18e9608d9ec1ca9 303 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 293 4.7E-98 T 31-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 DY252_15540 53944719a8a85a29e18e9608d9ec1ca9 303 Gene3D G3DSA:3.90.25.10 161 289 1.3E-103 T 31-10-2018 DY252_15540 53944719a8a85a29e18e9608d9ec1ca9 303 Gene3D G3DSA:3.40.50.720 4 283 1.3E-103 T 31-10-2018 DY252_09935 2979d35bca2ed4aab0347502dce51678 148 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 126 3.8E-14 T 31-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DY252_09935 2979d35bca2ed4aab0347502dce51678 148 Gene3D G3DSA:3.10.180.10 2 148 4.9E-55 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_09935 2979d35bca2ed4aab0347502dce51678 148 SUPERFAMILY SSF54593 4 135 2.89E-30 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_07900 d0831a893571675071c472ff843d0d66 504 Pfam PF00155 Aminotransferase class I and II 172 479 2.6E-18 T 31-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DY252_07900 d0831a893571675071c472ff843d0d66 504 Gene3D G3DSA:1.10.10.10 8 87 2.6E-16 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_07900 d0831a893571675071c472ff843d0d66 504 SUPERFAMILY SSF46785 12 83 9.08E-17 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_07900 d0831a893571675071c472ff843d0d66 504 Gene3D G3DSA:3.40.640.10 122 485 9.9E-96 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_07900 d0831a893571675071c472ff843d0d66 504 SUPERFAMILY SSF53383 108 490 2.76E-76 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_07900 d0831a893571675071c472ff843d0d66 504 SMART SM00345 20 79 5.8E-9 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_07900 d0831a893571675071c472ff843d0d66 504 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 79 1.6E-11 T 31-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DY252_21085 d67fd7e82455c8f440143513100768a0 93 SUPERFAMILY SSF46955 11 61 1.46E-9 T 31-10-2018 IPR009061 Putative DNA-binding domain superfamily DY252_21085 d67fd7e82455c8f440143513100768a0 93 Pfam PF12728 Helix-turn-helix domain 12 61 1.4E-7 T 31-10-2018 DY252_04200 1739a5e49f8d463ea8920a3d332d21f5 696 Gene3D G3DSA:1.10.287.950 129 421 4.0E-48 T 31-10-2018 DY252_04200 1739a5e49f8d463ea8920a3d332d21f5 696 SMART SM00283 175 415 3.8E-30 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_04200 1739a5e49f8d463ea8920a3d332d21f5 696 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 232 390 2.4E-28 T 31-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DY252_04200 1739a5e49f8d463ea8920a3d332d21f5 696 Gene3D G3DSA:2.40.10.220 424 538 5.0E-5 T 31-10-2018 DY252_04200 1739a5e49f8d463ea8920a3d332d21f5 696 SUPERFAMILY SSF141371 426 526 9.42E-5 T 31-10-2018 DY252_04200 1739a5e49f8d463ea8920a3d332d21f5 696 SUPERFAMILY SSF58104 146 415 2.22E-52 T 31-10-2018 DY252_00335 c8cf2662a7ea6ef2c2388ed856aac78a 250 Pfam PF02535 ZIP Zinc transporter 92 241 1.3E-9 T 31-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 DY252_08905 5abbe27e328184162bbcb9793e9c830d 65 Hamap MF_00422 Protein translocase subunit SecE [secE]. 4 59 12.729 T 31-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DY252_08905 5abbe27e328184162bbcb9793e9c830d 65 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 8 59 5.5E-20 T 31-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DY252_08905 5abbe27e328184162bbcb9793e9c830d 65 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 8 62 2.4E-20 T 31-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DY252_08905 5abbe27e328184162bbcb9793e9c830d 65 Gene3D G3DSA:1.20.5.1030 4 60 1.1E-16 T 31-10-2018 IPR038379 SecE superfamily DY252_08190 2f26e5a21866860cf518dc7aac9e77ca 418 Gene3D G3DSA:1.20.1250.20 230 416 5.9E-16 T 31-10-2018 DY252_08190 2f26e5a21866860cf518dc7aac9e77ca 418 Gene3D G3DSA:1.20.1250.20 29 216 6.4E-10 T 31-10-2018 DY252_08190 2f26e5a21866860cf518dc7aac9e77ca 418 SUPERFAMILY SSF103473 34 409 1.83E-35 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_08190 2f26e5a21866860cf518dc7aac9e77ca 418 Pfam PF07690 Major Facilitator Superfamily 240 412 2.0E-10 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_08190 2f26e5a21866860cf518dc7aac9e77ca 418 Pfam PF07690 Major Facilitator Superfamily 38 223 1.5E-10 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_04625 c0e25b13a46606a9a28193bb5f0ae4c4 126 Gene3D G3DSA:3.40.50.2300 1 126 7.5E-29 T 31-10-2018 DY252_04625 c0e25b13a46606a9a28193bb5f0ae4c4 126 SUPERFAMILY SSF52172 5 120 4.55E-27 T 31-10-2018 IPR011006 CheY-like superfamily DY252_04625 c0e25b13a46606a9a28193bb5f0ae4c4 126 SMART SM00448 7 119 1.5E-20 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_04625 c0e25b13a46606a9a28193bb5f0ae4c4 126 Pfam PF00072 Response regulator receiver domain 9 119 5.5E-22 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_00265 9cc804bd97a0647ac9e7e22e1900440e 85 SUPERFAMILY SSF143120 1 48 4.71E-7 T 31-10-2018 IPR036165 YefM-like superfamily DY252_00265 9cc804bd97a0647ac9e7e22e1900440e 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 62 1.4E-5 T 31-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM DY252_03995 5db45d14d5af55b6b3929de43e14e717 437 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 22 415 9.7E-98 T 31-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DY252_03995 5db45d14d5af55b6b3929de43e14e717 437 Pfam PF00860 Permease family 26 395 3.4E-88 T 31-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DY252_19960 f1cfd9699782d1ff23d4fb60b42ecc28 238 Gene3D G3DSA:3.40.1280.10 4 175 4.4E-64 T 31-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DY252_19960 f1cfd9699782d1ff23d4fb60b42ecc28 238 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 26 223 6.4E-57 T 31-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DY252_19960 f1cfd9699782d1ff23d4fb60b42ecc28 238 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 238 100.404 T 31-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DY252_19960 f1cfd9699782d1ff23d4fb60b42ecc28 238 Gene3D G3DSA:1.10.1270.20 176 234 1.3E-29 T 31-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DY252_19960 f1cfd9699782d1ff23d4fb60b42ecc28 238 PIRSF PIRSF000386 4 237 6.1E-91 T 31-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DY252_19960 f1cfd9699782d1ff23d4fb60b42ecc28 238 SUPERFAMILY SSF75217 4 233 4.77E-91 T 31-10-2018 IPR029028 Alpha/beta knot methyltransferases DY252_19960 f1cfd9699782d1ff23d4fb60b42ecc28 238 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 7 232 1.8E-83 T 31-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DY252_11965 d296bb3220cfdf777892a2c464f8fe67 116 Gene3D G3DSA:3.40.1530.20 3 115 9.2E-27 T 31-10-2018 DY252_11965 d296bb3220cfdf777892a2c464f8fe67 116 Pfam PF07372 Protein of unknown function (DUF1491) 5 107 5.1E-25 T 31-10-2018 IPR009964 Protein of unknown function DUF1491 DY252_01180 5cce3513755729dd32e98b5acd1c292c 414 Gene3D G3DSA:3.40.190.10 29 371 2.0E-141 T 31-10-2018 DY252_01180 5cce3513755729dd32e98b5acd1c292c 414 SUPERFAMILY SSF53850 28 410 4.35E-58 T 31-10-2018 DY252_01180 5cce3513755729dd32e98b5acd1c292c 414 Gene3D G3DSA:3.40.190.10 142 395 2.0E-141 T 31-10-2018 DY252_01180 5cce3513755729dd32e98b5acd1c292c 414 Pfam PF01547 Bacterial extracellular solute-binding protein 44 300 2.6E-27 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_06040 bf316cb6396d6865cbb405b0c2d0b869 246 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_06040 bf316cb6396d6865cbb405b0c2d0b869 246 Pfam PF00005 ABC transporter 19 172 1.1E-31 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_06040 bf316cb6396d6865cbb405b0c2d0b869 246 SUPERFAMILY SSF52540 3 228 4.32E-60 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_06040 bf316cb6396d6865cbb405b0c2d0b869 246 Gene3D G3DSA:3.40.50.300 1 236 6.3E-60 T 31-10-2018 DY252_06040 bf316cb6396d6865cbb405b0c2d0b869 246 SMART SM00382 28 220 9.6E-15 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_12285 862175d9d767122989ddc91b9b6f6dce 157 SUPERFAMILY SSF55781 4 154 9.16E-40 T 31-10-2018 DY252_12285 862175d9d767122989ddc91b9b6f6dce 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 96 113 - T 31-10-2018 IPR000614 Free Met sulfoxide reductase conserved site DY252_12285 862175d9d767122989ddc91b9b6f6dce 157 Gene3D G3DSA:3.30.450.40 5 157 5.7E-55 T 31-10-2018 IPR029016 GAF-like domain superfamily DY252_12285 862175d9d767122989ddc91b9b6f6dce 157 Pfam PF13185 GAF domain 56 154 1.2E-11 T 31-10-2018 IPR003018 GAF domain GO:0005515 DY252_01100 09cbb1bc50f7ec8e7018e404ea03f9e3 164 Gene3D G3DSA:1.10.260.40 28 103 3.7E-15 T 31-10-2018 DY252_01100 09cbb1bc50f7ec8e7018e404ea03f9e3 164 SMART SM00530 36 91 7.5E-12 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_01100 09cbb1bc50f7ec8e7018e404ea03f9e3 164 Pfam PF01381 Helix-turn-helix 38 90 3.0E-11 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_01100 09cbb1bc50f7ec8e7018e404ea03f9e3 164 SUPERFAMILY SSF47413 21 105 1.54E-29 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_05115 8def44619eb44b98bd1112aa258f2fba 197 Pfam PF00857 Isochorismatase family 23 193 8.6E-39 T 31-10-2018 IPR000868 Isochorismatase-like GO:0003824 DY252_05115 8def44619eb44b98bd1112aa258f2fba 197 SUPERFAMILY SSF52499 8 196 9.29E-49 T 31-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DY252_05115 8def44619eb44b98bd1112aa258f2fba 197 Gene3D G3DSA:3.40.50.850 2 195 4.5E-51 T 31-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DY252_12705 c8cebe5c393cdc04ba11979acbf62ac0 162 Gene3D G3DSA:1.10.10.10 1 138 1.2E-26 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_12705 c8cebe5c393cdc04ba11979acbf62ac0 162 SUPERFAMILY SSF46785 5 140 1.76E-28 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_12705 c8cebe5c393cdc04ba11979acbf62ac0 162 SMART SM00347 24 124 1.4E-18 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_12705 c8cebe5c393cdc04ba11979acbf62ac0 162 Pfam PF01047 MarR family 34 89 1.1E-11 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_16465 9fea7529cdb90fad6b23e14c30dd66b0 376 Pfam PF01180 Dihydroorotate dehydrogenase 45 335 3.5E-99 T 31-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DY252_16465 9fea7529cdb90fad6b23e14c30dd66b0 376 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 4 331 41.751 T 31-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 DY252_16465 9fea7529cdb90fad6b23e14c30dd66b0 376 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 81 100 - T 31-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 DY252_16465 9fea7529cdb90fad6b23e14c30dd66b0 376 SUPERFAMILY SSF51395 4 350 1.34E-106 T 31-10-2018 DY252_16465 9fea7529cdb90fad6b23e14c30dd66b0 376 Gene3D G3DSA:3.20.20.70 2 359 2.6E-145 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_16465 9fea7529cdb90fad6b23e14c30dd66b0 376 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 10 350 1.9E-125 T 31-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 DY252_16465 9fea7529cdb90fad6b23e14c30dd66b0 376 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 287 307 - T 31-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 DY252_17650 f0769ae9258b86d7f22436e9887bd2ca 260 Pfam PF13860 FlgD Ig-like domain 112 175 3.4E-12 T 31-10-2018 IPR025965 FlgD Ig-like domain DY252_17650 f0769ae9258b86d7f22436e9887bd2ca 260 Pfam PF13861 FlgD Tudor-like domain 88 224 1.3E-6 T 31-10-2018 IPR025963 FlgD Tudor-like domain DY252_17650 f0769ae9258b86d7f22436e9887bd2ca 260 Gene3D G3DSA:2.60.40.4070 103 197 2.9E-15 T 31-10-2018 DY252_17650 f0769ae9258b86d7f22436e9887bd2ca 260 Pfam PF03963 Flagellar hook capping protein - N-terminal region 12 77 1.1E-17 T 31-10-2018 IPR005648 Flagellar hook capping protein DY252_17650 f0769ae9258b86d7f22436e9887bd2ca 260 Gene3D G3DSA:2.30.30.910 93 220 2.9E-15 T 31-10-2018 DY252_01020 e280083214850e00ae31b578dffe4eb2 257 Gene3D G3DSA:3.40.50.11240 70 245 9.2E-62 T 31-10-2018 DY252_01020 e280083214850e00ae31b578dffe4eb2 257 Gene3D G3DSA:1.10.30.40 6 58 6.2E-10 T 31-10-2018 DY252_01020 e280083214850e00ae31b578dffe4eb2 257 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 14 246 1.3E-88 T 31-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 DY252_01020 e280083214850e00ae31b578dffe4eb2 257 PIRSF PIRSF018982 2 255 2.5E-89 T 31-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 DY252_00835 049cdb58f0e964da735e591d113ac751 276 Pfam PF03537 Glycoside-hydrolase family GH114 45 269 1.8E-66 T 31-10-2018 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain DY252_00835 049cdb58f0e964da735e591d113ac751 276 SUPERFAMILY SSF51445 53 276 3.37E-34 T 31-10-2018 IPR017853 Glycoside hydrolase superfamily DY252_00835 049cdb58f0e964da735e591d113ac751 276 Gene3D G3DSA:3.20.20.70 44 275 1.1E-12 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_17295 4c0bd9c65cd5b9e70021f9a95009342b 263 SUPERFAMILY SSF161098 4 259 2.9E-50 T 31-10-2018 IPR035906 MetI-like superfamily DY252_17295 4c0bd9c65cd5b9e70021f9a95009342b 263 Gene3D G3DSA:1.10.3720.10 6 263 4.2E-47 T 31-10-2018 IPR035906 MetI-like superfamily DY252_17295 4c0bd9c65cd5b9e70021f9a95009342b 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 255 3.4E-11 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_16205 7516561c80903a97b9024ca50d3bd86e 493 TIGRFAM TIGR00835 agcS: amino acid carrier protein 50 480 3.3E-118 T 31-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DY252_16205 7516561c80903a97b9024ca50d3bd86e 493 PRINTS PR00175 Sodium/alanine symporter signature 255 274 1.2E-47 T 31-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DY252_16205 7516561c80903a97b9024ca50d3bd86e 493 PRINTS PR00175 Sodium/alanine symporter signature 227 245 1.2E-47 T 31-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DY252_16205 7516561c80903a97b9024ca50d3bd86e 493 PRINTS PR00175 Sodium/alanine symporter signature 122 144 1.2E-47 T 31-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DY252_16205 7516561c80903a97b9024ca50d3bd86e 493 PRINTS PR00175 Sodium/alanine symporter signature 388 410 1.2E-47 T 31-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DY252_16205 7516561c80903a97b9024ca50d3bd86e 493 PRINTS PR00175 Sodium/alanine symporter signature 449 469 1.2E-47 T 31-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DY252_16205 7516561c80903a97b9024ca50d3bd86e 493 PRINTS PR00175 Sodium/alanine symporter signature 345 363 1.2E-47 T 31-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DY252_16205 7516561c80903a97b9024ca50d3bd86e 493 Pfam PF01235 Sodium:alanine symporter family 88 489 4.0E-131 T 31-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DY252_16610 27e17fdbc49041201972344318af6a01 182 Gene3D G3DSA:3.90.1340.10 22 84 3.0E-18 T 31-10-2018 IPR037053 Phage tail collar domain superfamily DY252_16610 27e17fdbc49041201972344318af6a01 182 SUPERFAMILY SSF88874 22 176 7.32E-39 T 31-10-2018 DY252_16610 27e17fdbc49041201972344318af6a01 182 Pfam PF07484 Phage Tail Collar Domain 27 83 1.4E-20 T 31-10-2018 IPR011083 Phage tail collar domain DY252_20390 591039d4cd928056a5ef10855d5f4c7f 182 Pfam PF12915 Protein of unknown function (DUF3833) 12 173 4.2E-66 T 31-10-2018 IPR024409 Protein of unknown function DUF3833 DY252_03375 98c645ebd84418454bfc1a6ec2d8d367 236 Pfam PF01914 MarC family integral membrane protein 4 125 6.0E-31 T 31-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DY252_03375 98c645ebd84418454bfc1a6ec2d8d367 236 Pfam PF01914 MarC family integral membrane protein 129 235 1.5E-22 T 31-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DY252_03375 98c645ebd84418454bfc1a6ec2d8d367 236 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 110 4.2E-30 T 31-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DY252_05575 f8180fa320d8b82a1fdd01c243bb62f1 123 SUPERFAMILY SSF88697 8 115 4.72E-17 T 31-10-2018 IPR015947 PUA-like superfamily DY252_05575 f8180fa320d8b82a1fdd01c243bb62f1 123 Gene3D G3DSA:2.30.130.30 5 122 8.1E-16 T 31-10-2018 DY252_01390 ad1dc196422fc5d8abcc8bcfa0ef1ede 135 Gene3D G3DSA:3.10.180.10 7 134 3.1E-46 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_01390 ad1dc196422fc5d8abcc8bcfa0ef1ede 135 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 2 128 6.2E-10 T 31-10-2018 IPR028973 PhnB-like DY252_01390 ad1dc196422fc5d8abcc8bcfa0ef1ede 135 SUPERFAMILY SSF54593 1 130 2.99E-33 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_18260 a79d7ce62450bf7c850b9a71be411987 284 Pfam PF01551 Peptidase family M23 171 265 3.0E-25 T 31-10-2018 IPR016047 Peptidase M23 DY252_18260 a79d7ce62450bf7c850b9a71be411987 284 SUPERFAMILY SSF51261 80 266 2.49E-44 T 31-10-2018 IPR011055 Duplicated hybrid motif DY252_18260 a79d7ce62450bf7c850b9a71be411987 284 Gene3D G3DSA:2.70.70.10 116 272 7.6E-41 T 31-10-2018 IPR011055 Duplicated hybrid motif DY252_07140 37fdcb4ef26b03d1fbd1b68f33093a6e 274 Pfam PF06629 MltA-interacting protein MipA 56 274 3.7E-35 T 31-10-2018 IPR010583 MltA-interacting MipA DY252_18120 c0f576143d394e100527f45a2a3d3995 332 SUPERFAMILY SSF53850 67 319 2.42E-44 T 31-10-2018 DY252_18120 c0f576143d394e100527f45a2a3d3995 332 Gene3D G3DSA:3.40.190.10 154 261 1.7E-53 T 31-10-2018 DY252_18120 c0f576143d394e100527f45a2a3d3995 332 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 71 308 2.5E-57 T 31-10-2018 DY252_18120 c0f576143d394e100527f45a2a3d3995 332 Gene3D G3DSA:3.40.190.10 71 287 1.7E-53 T 31-10-2018 DY252_18120 c0f576143d394e100527f45a2a3d3995 332 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 56 286 1.1E-64 T 31-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 DY252_11310 39dfc3d39361f95093731f98fe621669 307 Pfam PF01925 Sulfite exporter TauE/SafE 18 288 6.5E-50 T 31-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DY252_16505 375705d90f7285d76ebe46cf3e295276 81 Gene3D G3DSA:1.10.260.40 3 65 6.6E-13 T 31-10-2018 DY252_16505 375705d90f7285d76ebe46cf3e295276 81 SMART SM00530 7 63 1.3E-9 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_16505 375705d90f7285d76ebe46cf3e295276 81 SUPERFAMILY SSF47413 3 60 3.66E-13 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_16505 375705d90f7285d76ebe46cf3e295276 81 Pfam PF01381 Helix-turn-helix 8 57 4.7E-11 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_12600 d2f010bab9aaf5e5d4b131ddce4bb4fd 226 Gene3D G3DSA:3.30.450.40 76 153 1.7E-12 T 31-10-2018 IPR029016 GAF-like domain superfamily DY252_12600 d2f010bab9aaf5e5d4b131ddce4bb4fd 226 SMART SM00346 6 95 7.2E-19 T 31-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DY252_12600 d2f010bab9aaf5e5d4b131ddce4bb4fd 226 Gene3D G3DSA:1.10.10.10 1 75 1.8E-21 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_12600 d2f010bab9aaf5e5d4b131ddce4bb4fd 226 Pfam PF09339 IclR helix-turn-helix domain 8 55 1.6E-14 T 31-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DY252_12600 d2f010bab9aaf5e5d4b131ddce4bb4fd 226 SUPERFAMILY SSF55781 70 224 1.88E-28 T 31-10-2018 DY252_12600 d2f010bab9aaf5e5d4b131ddce4bb4fd 226 SUPERFAMILY SSF46785 6 79 2.06E-18 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_12600 d2f010bab9aaf5e5d4b131ddce4bb4fd 226 Gene3D G3DSA:3.30.450.40 154 224 3.7E-14 T 31-10-2018 IPR029016 GAF-like domain superfamily DY252_12600 d2f010bab9aaf5e5d4b131ddce4bb4fd 226 Pfam PF01614 Bacterial transcriptional regulator 158 219 1.7E-8 T 31-10-2018 IPR014757 Transcription regulator IclR, C-terminal DY252_18745 9c266fa9ea405b045621858b11577c75 468 SUPERFAMILY SSF50998 93 417 1.18E-9 T 31-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DY252_18745 9c266fa9ea405b045621858b11577c75 468 Gene3D G3DSA:2.130.10.10 49 418 2.6E-7 T 31-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DY252_18745 9c266fa9ea405b045621858b11577c75 468 Pfam PF14269 Arylsulfotransferase (ASST) 151 417 5.9E-31 T 31-10-2018 IPR039535 Arylsulfotransferase-like DY252_21130 641c4020e1252270d43bcb773d9fe21b 195 Pfam PF13521 AAA domain 7 160 3.3E-10 T 31-10-2018 IPR038727 NadR/Ttd14, AAA domain DY252_21130 641c4020e1252270d43bcb773d9fe21b 195 SUPERFAMILY SSF52540 4 154 3.23E-8 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_21130 641c4020e1252270d43bcb773d9fe21b 195 Gene3D G3DSA:3.40.50.300 8 173 3.5E-8 T 31-10-2018 DY252_01780 e54ee4f0c3c767ac0a5029c6337e3772 174 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 65 71 - T 31-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DY252_01780 e54ee4f0c3c767ac0a5029c6337e3772 174 SUPERFAMILY SSF50324 6 171 2.22E-68 T 31-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DY252_01780 e54ee4f0c3c767ac0a5029c6337e3772 174 Gene3D G3DSA:3.90.80.10 1 174 1.6E-72 T 31-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DY252_01780 e54ee4f0c3c767ac0a5029c6337e3772 174 Pfam PF00719 Inorganic pyrophosphatase 18 170 1.9E-57 T 31-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DY252_01780 e54ee4f0c3c767ac0a5029c6337e3772 174 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 173 37.908 T 31-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DY252_16950 ee8e4d773db0bdad041e4bafb8d3a4eb 251 SUPERFAMILY SSF53448 2 197 4.22E-25 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_16950 ee8e4d773db0bdad041e4bafb8d3a4eb 251 Pfam PF00535 Glycosyl transferase family 2 24 134 3.5E-10 T 31-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DY252_16950 ee8e4d773db0bdad041e4bafb8d3a4eb 251 Gene3D G3DSA:3.90.550.10 32 225 1.4E-21 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_04480 807ed08f54a56a2c832c4fcb3e7cfcef 221 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 7 217 1.6E-79 T 31-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria DY252_04480 807ed08f54a56a2c832c4fcb3e7cfcef 221 Pfam PF03379 CcmB protein 5 217 2.2E-78 T 31-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_04480 807ed08f54a56a2c832c4fcb3e7cfcef 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 102 120 1.4E-61 T 31-10-2018 DY252_04480 807ed08f54a56a2c832c4fcb3e7cfcef 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 157 176 1.4E-61 T 31-10-2018 DY252_04480 807ed08f54a56a2c832c4fcb3e7cfcef 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 28 49 1.4E-61 T 31-10-2018 DY252_04480 807ed08f54a56a2c832c4fcb3e7cfcef 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 194 217 1.4E-61 T 31-10-2018 DY252_04480 807ed08f54a56a2c832c4fcb3e7cfcef 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 77 100 1.4E-61 T 31-10-2018 DY252_04480 807ed08f54a56a2c832c4fcb3e7cfcef 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 54 71 1.4E-61 T 31-10-2018 DY252_04480 807ed08f54a56a2c832c4fcb3e7cfcef 221 PIRSF PIRSF002764 1 221 2.2E-77 T 31-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria DY252_21250 7abd78bc368604f03b77fe5b03610193 143 Gene3D G3DSA:3.40.50.1010 4 139 2.9E-35 T 31-10-2018 DY252_21250 7abd78bc368604f03b77fe5b03610193 143 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 140 10.125 T 31-10-2018 IPR022907 VapC family GO:0004540 DY252_21250 7abd78bc368604f03b77fe5b03610193 143 Pfam PF01850 PIN domain 4 135 1.8E-12 T 31-10-2018 IPR002716 PIN domain DY252_21250 7abd78bc368604f03b77fe5b03610193 143 SUPERFAMILY SSF88723 3 138 8.97E-27 T 31-10-2018 IPR029060 PIN-like domain superfamily DY252_20930 205a1ee1fefc55caeebcda8e7a523866 229 Pfam PF04335 VirB8 protein 23 226 1.9E-70 T 31-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 DY252_20930 205a1ee1fefc55caeebcda8e7a523866 229 SUPERFAMILY SSF54427 94 228 4.82E-29 T 31-10-2018 IPR032710 NTF2-like domain superfamily DY252_04060 fc1c5ba93a71264392d3b55de1bb3fd7 280 Pfam PF01553 Acyltransferase 59 183 4.4E-21 T 31-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DY252_04060 fc1c5ba93a71264392d3b55de1bb3fd7 280 SMART SM00563 71 186 2.8E-26 T 31-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DY252_04060 fc1c5ba93a71264392d3b55de1bb3fd7 280 SUPERFAMILY SSF69593 17 226 7.85E-34 T 31-10-2018 DY252_12375 9c096b0104b068b483df0359fef152cc 257 SUPERFAMILY SSF52540 8 252 6.41E-72 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_12375 9c096b0104b068b483df0359fef152cc 257 Pfam PF00005 ABC transporter 23 182 4.8E-30 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_12375 9c096b0104b068b483df0359fef152cc 257 PIRSF PIRSF039085 4 257 9.0E-114 T 31-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DY252_12375 9c096b0104b068b483df0359fef152cc 257 SMART SM00382 32 230 1.7E-15 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_12375 9c096b0104b068b483df0359fef152cc 257 Gene3D G3DSA:3.40.50.300 5 257 1.0E-73 T 31-10-2018 DY252_12375 9c096b0104b068b483df0359fef152cc 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_06445 2d75150ec39a2a026787f890effd90d8 287 Pfam PF03799 Cell division protein FtsQ 146 260 2.5E-16 T 31-10-2018 IPR005548 Cell division protein FtsQ/DivIB DY252_06445 2d75150ec39a2a026787f890effd90d8 287 Gene3D G3DSA:3.40.50.11690 144 271 6.6E-6 T 31-10-2018 DY252_06445 2d75150ec39a2a026787f890effd90d8 287 Gene3D G3DSA:3.10.20.310 74 141 6.0E-11 T 31-10-2018 DY252_06445 2d75150ec39a2a026787f890effd90d8 287 Pfam PF08478 POTRA domain, FtsQ-type 75 142 1.0E-19 T 31-10-2018 IPR013685 POTRA domain, FtsQ-type DY252_06445 2d75150ec39a2a026787f890effd90d8 287 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 47 278 19.707 T 31-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 DY252_04000 bd3c47c05721feea403343ff4b714fac 183 Gene3D G3DSA:1.20.120.1760 3 181 7.0E-15 T 31-10-2018 DY252_04000 bd3c47c05721feea403343ff4b714fac 183 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 179 2.6E-44 T 31-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DY252_04000 bd3c47c05721feea403343ff4b714fac 183 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 4.4E-15 T 31-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DY252_04000 bd3c47c05721feea403343ff4b714fac 183 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 31-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DY252_04000 bd3c47c05721feea403343ff4b714fac 183 PIRSF PIRSF000847 1 183 8.7E-43 T 31-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DY252_13915 f99b38f8e70054d19955e8fba4bda5fc 84 Pfam PF11127 Protein of unknown function (DUF2892) 1 71 1.6E-19 T 31-10-2018 IPR021309 Protein of unknown function DUF2892 DY252_02490 3978a59782bdad6ea84a018c7c2ff3e5 134 SUPERFAMILY SSF52172 7 130 6.69E-31 T 31-10-2018 IPR011006 CheY-like superfamily DY252_02490 3978a59782bdad6ea84a018c7c2ff3e5 134 Gene3D G3DSA:3.40.50.2300 5 133 8.6E-32 T 31-10-2018 DY252_02490 3978a59782bdad6ea84a018c7c2ff3e5 134 Pfam PF00072 Response regulator receiver domain 11 121 1.6E-23 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_02490 3978a59782bdad6ea84a018c7c2ff3e5 134 SMART SM00448 7 120 7.5E-25 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_12370 572e080f4a2015200a07d99632cb7366 265 Gene3D G3DSA:3.40.190.10 31 257 1.2E-77 T 31-10-2018 DY252_12370 572e080f4a2015200a07d99632cb7366 265 Gene3D G3DSA:3.40.190.10 114 216 1.2E-77 T 31-10-2018 DY252_12370 572e080f4a2015200a07d99632cb7366 265 SMART SM00062 28 260 1.1E-59 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_12370 572e080f4a2015200a07d99632cb7366 265 SUPERFAMILY SSF53850 1 258 2.17E-66 T 31-10-2018 DY252_12370 572e080f4a2015200a07d99632cb7366 265 SMART SM00079 28 259 0.0013 T 31-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DY252_12370 572e080f4a2015200a07d99632cb7366 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 258 1.3E-61 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_12370 572e080f4a2015200a07d99632cb7366 265 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 51 64 - T 31-10-2018 IPR018313 Solute-binding protein family 3, conserved site DY252_22105 83547bdf5dd6f49e915a105bcd36e1cf 248 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 248 33.321 T 31-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_22105 83547bdf5dd6f49e915a105bcd36e1cf 248 Pfam PF01416 tRNA pseudouridine synthase 8 104 4.0E-7 T 31-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_22105 83547bdf5dd6f49e915a105bcd36e1cf 248 Pfam PF01416 tRNA pseudouridine synthase 144 248 2.2E-29 T 31-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_22105 83547bdf5dd6f49e915a105bcd36e1cf 248 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 242 2.4E-58 T 31-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_22105 83547bdf5dd6f49e915a105bcd36e1cf 248 SUPERFAMILY SSF55120 1 248 1.73E-81 T 31-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_22105 83547bdf5dd6f49e915a105bcd36e1cf 248 Gene3D G3DSA:3.30.70.580 1 106 1.1E-33 T 31-10-2018 DY252_22105 83547bdf5dd6f49e915a105bcd36e1cf 248 Gene3D G3DSA:3.30.70.660 107 247 4.6E-44 T 31-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 DY252_22105 83547bdf5dd6f49e915a105bcd36e1cf 248 PIRSF PIRSF001430 1 248 1.3E-72 T 31-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DY252_02715 1c32fd1d12d0847aa335c465821c04a0 239 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 26 235 5.6E-68 T 31-10-2018 IPR006214 Bax inhibitor 1-related DY252_05350 7813be805d41abd02ad638101d64b008 245 SUPERFAMILY SSF52317 9 202 2.45E-38 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_05350 7813be805d41abd02ad638101d64b008 245 Gene3D G3DSA:3.40.50.880 7 240 3.9E-53 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_05350 7813be805d41abd02ad638101d64b008 245 Pfam PF00117 Glutamine amidotransferase class-I 32 188 1.4E-16 T 31-10-2018 IPR017926 Glutamine amidotransferase DY252_01480 d4f36d39dd677583a7ab2fd25e0d2fc8 121 Pfam PF07876 Stress responsive A/B Barrel Domain 2 72 8.4E-11 T 31-10-2018 IPR013097 Stress responsive alpha-beta barrel DY252_01480 d4f36d39dd677583a7ab2fd25e0d2fc8 121 SUPERFAMILY SSF54909 2 74 2.86E-12 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_01480 d4f36d39dd677583a7ab2fd25e0d2fc8 121 Gene3D G3DSA:3.30.70.100 1 104 2.4E-14 T 31-10-2018 DY252_01480 d4f36d39dd677583a7ab2fd25e0d2fc8 121 SMART SM00886 2 102 2.9E-8 T 31-10-2018 IPR013097 Stress responsive alpha-beta barrel DY252_13770 2f1bd3223d7244a7f34a01d1f6bdd2cb 398 Pfam PF00005 ABC transporter 45 196 3.9E-27 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_13770 2f1bd3223d7244a7f34a01d1f6bdd2cb 398 SMART SM00382 53 254 1.8E-11 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_13770 2f1bd3223d7244a7f34a01d1f6bdd2cb 398 SUPERFAMILY SSF52540 43 274 5.14E-71 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_13770 2f1bd3223d7244a7f34a01d1f6bdd2cb 398 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_13770 2f1bd3223d7244a7f34a01d1f6bdd2cb 398 Gene3D G3DSA:3.40.50.300 33 300 9.5E-69 T 31-10-2018 DY252_13770 2f1bd3223d7244a7f34a01d1f6bdd2cb 398 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 5 392 2.8E-164 T 31-10-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 DY252_11675 55601e9fe1b2abc34ea4fc15f7efd829 554 Gene3D G3DSA:1.10.3720.10 303 552 2.7E-50 T 31-10-2018 IPR035906 MetI-like superfamily DY252_11675 55601e9fe1b2abc34ea4fc15f7efd829 554 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 351 542 2.3E-14 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_11675 55601e9fe1b2abc34ea4fc15f7efd829 554 SUPERFAMILY SSF161098 326 544 3.92E-47 T 31-10-2018 IPR035906 MetI-like superfamily DY252_05315 93637be913ea0be52124c2bc7ed7963b 375 SUPERFAMILY SSF53335 9 364 1.25E-102 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_05315 93637be913ea0be52124c2bc7ed7963b 375 Gene3D G3DSA:3.40.50.12710 1 366 8.7E-106 T 31-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 DY252_05315 93637be913ea0be52124c2bc7ed7963b 375 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 66 302 2.9E-63 T 31-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 DY252_14470 a2eaf84168367d6329c5c8b8e2145e9b 131 Pfam PF07366 SnoaL-like polyketide cyclase 8 128 2.8E-37 T 31-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 DY252_14470 a2eaf84168367d6329c5c8b8e2145e9b 131 SUPERFAMILY SSF54427 4 128 3.15E-30 T 31-10-2018 IPR032710 NTF2-like domain superfamily DY252_14470 a2eaf84168367d6329c5c8b8e2145e9b 131 Gene3D G3DSA:3.10.450.50 3 128 8.5E-33 T 31-10-2018 DY252_07690 049d4fc70afd53e0ca9c6d5e21b41857 355 Pfam PF00805 Pentapeptide repeats (8 copies) 136 163 4.6E-4 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_07690 049d4fc70afd53e0ca9c6d5e21b41857 355 Pfam PF00805 Pentapeptide repeats (8 copies) 248 264 4.8E-4 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_07690 049d4fc70afd53e0ca9c6d5e21b41857 355 Pfam PF00805 Pentapeptide repeats (8 copies) 176 207 9.4E-8 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_07690 049d4fc70afd53e0ca9c6d5e21b41857 355 Gene3D G3DSA:2.160.20.80 87 290 3.3E-24 T 31-10-2018 DY252_07690 049d4fc70afd53e0ca9c6d5e21b41857 355 SUPERFAMILY SSF141571 121 266 5.69E-20 T 31-10-2018 DY252_19950 2bd15d72e39f09d0a7d178b4b4e20ac5 137 Pfam PF00886 Ribosomal protein S16 9 70 2.4E-26 T 31-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_19950 2bd15d72e39f09d0a7d178b4b4e20ac5 137 SUPERFAMILY SSF54565 2 96 4.45E-33 T 31-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_19950 2bd15d72e39f09d0a7d178b4b4e20ac5 137 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 24.474 T 31-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_19950 2bd15d72e39f09d0a7d178b4b4e20ac5 137 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 31-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_19950 2bd15d72e39f09d0a7d178b4b4e20ac5 137 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 82 7.3E-32 T 31-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_19950 2bd15d72e39f09d0a7d178b4b4e20ac5 137 Gene3D G3DSA:3.30.1320.10 1 130 4.6E-40 T 31-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_17935 263aa269d0fdb553bda6550a0d7a7320 453 Pfam PF01435 Peptidase family M48 252 407 1.5E-19 T 31-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DY252_17935 263aa269d0fdb553bda6550a0d7a7320 453 SUPERFAMILY SSF117782 61 144 2.22E-15 T 31-10-2018 IPR035439 UPF0145 domain superfamily DY252_17935 263aa269d0fdb553bda6550a0d7a7320 453 Pfam PF01906 Putative heavy-metal-binding 58 141 8.0E-17 T 31-10-2018 IPR002765 Uncharacterised protein family UPF0145 DY252_17935 263aa269d0fdb553bda6550a0d7a7320 453 Gene3D G3DSA:3.30.110.70 55 145 3.2E-15 T 31-10-2018 DY252_02435 dee780a973310bf66f7e094210f04feb 239 SUPERFAMILY SSF69618 3 235 8.76E-47 T 31-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DY252_02435 dee780a973310bf66f7e094210f04feb 239 Pfam PF02602 Uroporphyrinogen-III synthase HemD 17 232 4.7E-37 T 31-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DY252_02435 dee780a973310bf66f7e094210f04feb 239 Gene3D G3DSA:3.40.50.10090 119 237 4.9E-11 T 31-10-2018 DY252_02435 dee780a973310bf66f7e094210f04feb 239 Gene3D G3DSA:3.40.50.10090 2 114 1.6E-18 T 31-10-2018 DY252_06895 7074997519ec255b40e2f0dd91149e33 430 SUPERFAMILY SSF55205 1 426 2.45E-136 T 31-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DY252_06895 7074997519ec255b40e2f0dd91149e33 430 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 425 6.5E-174 T 31-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_06895 7074997519ec255b40e2f0dd91149e33 430 Gene3D G3DSA:3.65.10.10 21 238 3.9E-162 T 31-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DY252_06895 7074997519ec255b40e2f0dd91149e33 430 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 426 44.322 T 31-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DY252_06895 7074997519ec255b40e2f0dd91149e33 430 Gene3D G3DSA:3.65.10.10 6 423 3.9E-162 T 31-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DY252_06895 7074997519ec255b40e2f0dd91149e33 430 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 416 2.7E-100 T 31-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DY252_18490 c653381bc28b6740ef77101e4f772c15 441 Gene3D G3DSA:1.10.3410.10 239 348 2.2E-143 T 31-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 DY252_18490 c653381bc28b6740ef77101e4f772c15 441 Gene3D G3DSA:1.10.3210.10 27 238 2.2E-143 T 31-10-2018 DY252_18490 c653381bc28b6740ef77101e4f772c15 441 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 25 432 2.1E-91 T 31-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 DY252_18490 c653381bc28b6740ef77101e4f772c15 441 SMART SM00471 58 255 1.7E-9 T 31-10-2018 IPR003607 HD/PDEase domain DY252_18490 c653381bc28b6740ef77101e4f772c15 441 Gene3D G3DSA:1.10.3550.10 115 429 2.2E-143 T 31-10-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal DY252_18490 c653381bc28b6740ef77101e4f772c15 441 Pfam PF01966 HD domain 62 128 8.6E-10 T 31-10-2018 IPR006674 HD domain DY252_18490 c653381bc28b6740ef77101e4f772c15 441 SUPERFAMILY SSF109604 23 432 1.23E-65 T 31-10-2018 DY252_21785 5d89d7e8430d3957c09654bdcd89f314 341 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 34 316 2.8E-76 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_21785 5d89d7e8430d3957c09654bdcd89f314 341 Gene3D G3DSA:3.40.190.170 28 340 4.2E-98 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_21785 5d89d7e8430d3957c09654bdcd89f314 341 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 42 289 2.6E-66 T 31-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DY252_21785 5d89d7e8430d3957c09654bdcd89f314 341 PIRSF PIRSF006470 1 336 1.2E-87 T 31-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DY252_11155 1d77b13ea381c640062ff2f4fa1f17af 394 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 389 8.5E-115 T 31-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DY252_11155 1d77b13ea381c640062ff2f4fa1f17af 394 Gene3D G3DSA:3.90.1150.10 260 392 1.7E-42 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_11155 1d77b13ea381c640062ff2f4fa1f17af 394 SUPERFAMILY SSF53383 28 390 1.22E-100 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_11155 1d77b13ea381c640062ff2f4fa1f17af 394 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 11 391 9.4E-156 T 31-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 DY252_11155 1d77b13ea381c640062ff2f4fa1f17af 394 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 31-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DY252_11155 1d77b13ea381c640062ff2f4fa1f17af 394 PIRSF PIRSF001434 1 392 1.1E-129 T 31-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DY252_11155 1d77b13ea381c640062ff2f4fa1f17af 394 Gene3D G3DSA:3.40.640.10 6 258 3.3E-76 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_21500 3073c61452bced1441c91c434178830a 290 SUPERFAMILY SSF56112 2 287 1.27E-45 T 31-10-2018 IPR011009 Protein kinase-like domain superfamily DY252_21500 3073c61452bced1441c91c434178830a 290 Pfam PF03881 Fructosamine kinase 6 287 5.7E-58 T 31-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 DY252_21500 3073c61452bced1441c91c434178830a 290 Gene3D G3DSA:3.90.1200.10 95 289 2.9E-53 T 31-10-2018 DY252_21500 3073c61452bced1441c91c434178830a 290 Gene3D G3DSA:3.30.200.20 3 92 2.5E-18 T 31-10-2018 DY252_21500 3073c61452bced1441c91c434178830a 290 PIRSF PIRSF006221 1 289 4.2E-60 T 31-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 DY252_00795 88e01011f722998c041dc5a7762d017a 335 Gene3D G3DSA:3.40.50.720 4 276 1.1E-50 T 31-10-2018 DY252_00795 88e01011f722998c041dc5a7762d017a 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 233 6.3E-21 T 31-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DY252_00795 88e01011f722998c041dc5a7762d017a 335 SUPERFAMILY SSF51735 1 286 1.34E-56 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_10665 c41b5bde8cb873d868c407425adf122f 254 SUPERFAMILY SSF52540 1 225 3.49E-65 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_10665 c41b5bde8cb873d868c407425adf122f 254 Pfam PF00005 ABC transporter 17 163 1.4E-31 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_10665 c41b5bde8cb873d868c407425adf122f 254 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_10665 c41b5bde8cb873d868c407425adf122f 254 SMART SM00382 26 212 7.9E-14 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_10665 c41b5bde8cb873d868c407425adf122f 254 Gene3D G3DSA:3.40.50.300 1 248 1.5E-73 T 31-10-2018 DY252_07080 b565471132765b8fbcd3c94c5ffbe674 231 Gene3D G3DSA:3.40.50.880 1 231 2.7E-52 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_07080 b565471132765b8fbcd3c94c5ffbe674 231 SUPERFAMILY SSF52317 2 229 1.3E-39 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_07080 b565471132765b8fbcd3c94c5ffbe674 231 Pfam PF00117 Glutamine amidotransferase class-I 20 227 1.7E-12 T 31-10-2018 IPR017926 Glutamine amidotransferase DY252_19800 cf13c23bd1306233830535cc8c3d306a 177 Gene3D G3DSA:3.40.430.10 8 175 2.0E-37 T 31-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DY252_19800 cf13c23bd1306233830535cc8c3d306a 177 Pfam PF01872 RibD C-terminal domain 69 170 2.2E-7 T 31-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 DY252_19800 cf13c23bd1306233830535cc8c3d306a 177 SUPERFAMILY SSF53597 1 174 4.45E-34 T 31-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DY252_18945 5b6ee1575a1cfc160ccc712d76be4fd3 141 Pfam PF12680 SnoaL-like domain 20 121 6.4E-7 T 31-10-2018 IPR037401 SnoaL-like domain DY252_18945 5b6ee1575a1cfc160ccc712d76be4fd3 141 SUPERFAMILY SSF54427 18 130 2.41E-15 T 31-10-2018 IPR032710 NTF2-like domain superfamily DY252_18945 5b6ee1575a1cfc160ccc712d76be4fd3 141 Gene3D G3DSA:3.10.450.50 10 133 2.7E-10 T 31-10-2018 DY252_16930 58efbed06739d46d37a894b635d5e583 402 SUPERFAMILY SSF53756 25 399 2.83E-44 T 31-10-2018 DY252_16930 58efbed06739d46d37a894b635d5e583 402 Gene3D G3DSA:3.40.50.2000 208 378 2.3E-35 T 31-10-2018 DY252_16930 58efbed06739d46d37a894b635d5e583 402 Pfam PF00534 Glycosyl transferases group 1 218 376 6.3E-23 T 31-10-2018 IPR001296 Glycosyl transferase, family 1 DY252_16930 58efbed06739d46d37a894b635d5e583 402 Gene3D G3DSA:3.40.50.2000 137 379 2.3E-35 T 31-10-2018 DY252_21215 72a64b35cbb9d0d01692c135541b7c49 320 Pfam PF08401 Domain of unknown function (DUF1738) 17 139 2.1E-40 T 31-10-2018 IPR013610 Domain of unknown function DUF1738 DY252_21215 72a64b35cbb9d0d01692c135541b7c49 320 PIRSF PIRSF037112 3 312 1.1E-112 T 31-10-2018 IPR017113 Antirestriction, ArdC DY252_22060 443d8d894034d5c1c4b222aab5ec83de 269 PRINTS PR00164 ABC-2 type transport system membrane protein signature 209 228 6.2E-7 T 31-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DY252_22060 443d8d894034d5c1c4b222aab5ec83de 269 PRINTS PR00164 ABC-2 type transport system membrane protein signature 71 93 6.2E-7 T 31-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DY252_22060 443d8d894034d5c1c4b222aab5ec83de 269 PRINTS PR00164 ABC-2 type transport system membrane protein signature 189 208 6.2E-7 T 31-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DY252_22060 443d8d894034d5c1c4b222aab5ec83de 269 PIRSF PIRSF006648 2 267 2.8E-21 T 31-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DY252_22060 443d8d894034d5c1c4b222aab5ec83de 269 Pfam PF01061 ABC-2 type transporter 22 231 8.8E-27 T 31-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 DY252_05445 b870bd214bbca4d55d1405cdae2c40e6 350 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 48 263 2.5E-22 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_05445 b870bd214bbca4d55d1405cdae2c40e6 350 Gene3D G3DSA:3.40.190.170 33 340 3.1E-64 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_05445 b870bd214bbca4d55d1405cdae2c40e6 350 SUPERFAMILY SSF53850 133 213 4.45E-5 T 31-10-2018 DY252_12365 2941b083dfcca7131585171af593cd71 230 SUPERFAMILY SSF161098 11 209 3.66E-35 T 31-10-2018 IPR035906 MetI-like superfamily DY252_12365 2941b083dfcca7131585171af593cd71 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 223 3.5E-18 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_12365 2941b083dfcca7131585171af593cd71 230 Gene3D G3DSA:1.10.3720.10 8 228 1.1E-42 T 31-10-2018 IPR035906 MetI-like superfamily DY252_12365 2941b083dfcca7131585171af593cd71 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 118 3.1E-14 T 31-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DY252_21065 2a426e492436da829edb13d4a874f042 191 Pfam PF11000 Protein of unknown function (DUF2840) 23 170 1.0E-73 T 31-10-2018 IPR021263 Protein of unknown function DUF2840 DY252_09265 d23c0eb1a945028c0ff15da95b7bbb39 127 Pfam PF11042 Protein of unknown function (DUF2750) 11 111 2.0E-15 T 31-10-2018 IPR021284 Protein of unknown function DUF2750 DY252_20300 525caed9c475f77493812916a6479f51 279 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 112 275 7.9E-58 T 31-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 DY252_20300 525caed9c475f77493812916a6479f51 279 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 13 275 4.5E-95 T 31-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 DY252_20300 525caed9c475f77493812916a6479f51 279 SUPERFAMILY SSF51690 112 275 8.24E-57 T 31-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DY252_20300 525caed9c475f77493812916a6479f51 279 SUPERFAMILY SSF54675 7 111 9.65E-29 T 31-10-2018 DY252_20300 525caed9c475f77493812916a6479f51 279 Gene3D G3DSA:3.20.20.70 126 266 6.7E-102 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_20300 525caed9c475f77493812916a6479f51 279 PIRSF PIRSF006250 4 278 1.0E-90 T 31-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 DY252_20300 525caed9c475f77493812916a6479f51 279 Gene3D G3DSA:3.90.1170.20 17 274 6.7E-102 T 31-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 DY252_20300 525caed9c475f77493812916a6479f51 279 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 21 110 1.8E-25 T 31-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 DY252_05525 a30bf533718644ac5c217753748b5de3 479 SMART SM01080 19 393 7.2E-5 T 31-10-2018 IPR007890 CHASE2 DY252_05525 a30bf533718644ac5c217753748b5de3 479 Pfam PF05226 CHASE2 domain 8 393 5.9E-21 T 31-10-2018 IPR007890 CHASE2 DY252_12495 9c3e46a94f1810dff5dc93ed730016a0 135 SUPERFAMILY SSF54637 8 134 8.29E-30 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_12495 9c3e46a94f1810dff5dc93ed730016a0 135 Pfam PF03061 Thioesterase superfamily 18 86 1.5E-8 T 31-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DY252_12495 9c3e46a94f1810dff5dc93ed730016a0 135 Gene3D G3DSA:3.10.129.10 5 134 8.6E-27 T 31-10-2018 DY252_12525 8f2422fa72f5463544ea8cce32f0e24a 173 PIRSF PIRSF020565 8 164 2.0E-40 T 31-10-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted DY252_12525 8f2422fa72f5463544ea8cce32f0e24a 173 SUPERFAMILY SSF54637 13 157 2.73E-24 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_12525 8f2422fa72f5463544ea8cce32f0e24a 173 Gene3D G3DSA:3.10.129.10 14 152 5.5E-22 T 31-10-2018 DY252_12525 8f2422fa72f5463544ea8cce32f0e24a 173 Pfam PF07977 FabA-like domain 26 145 5.8E-5 T 31-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DY252_11655 a7b89d19b0c328296dd5246323274fd2 271 Pfam PF13468 Glyoxalase-like domain 5 195 1.1E-34 T 31-10-2018 IPR025870 Glyoxalase-like domain DY252_11655 a7b89d19b0c328296dd5246323274fd2 271 Gene3D G3DSA:3.10.180.10 1 134 6.9E-13 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_11655 a7b89d19b0c328296dd5246323274fd2 271 SUPERFAMILY SSF54593 3 246 1.21E-16 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_00460 e61fc46cb26c53d7e9cfcb0de97eadf9 83 Pfam PF11431 Membrane transport protein MerF 23 66 1.3E-18 T 31-10-2018 IPR021091 Mercury ion transport, MerF DY252_00460 e61fc46cb26c53d7e9cfcb0de97eadf9 83 Gene3D G3DSA:1.20.58.2000 2 80 1.5E-29 T 31-10-2018 DY252_01805 762c2ff07eebdf96edaf9df6f2355949 115 Gene3D G3DSA:3.30.70.100 1 93 2.2E-23 T 31-10-2018 DY252_01805 762c2ff07eebdf96edaf9df6f2355949 115 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 1.2E-15 T 31-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DY252_01805 762c2ff07eebdf96edaf9df6f2355949 115 SUPERFAMILY SSF54909 1 99 1.82E-28 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_17505 4b1649c86b35cd1a08bcdabf2ec029d2 241 SUPERFAMILY SSF103088 112 231 3.53E-18 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_17505 4b1649c86b35cd1a08bcdabf2ec029d2 241 Gene3D G3DSA:3.30.1330.60 79 236 3.3E-28 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_17505 4b1649c86b35cd1a08bcdabf2ec029d2 241 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 10 56 2.3E-13 T 31-10-2018 IPR025713 Motility protein B, N-terminal domain DY252_17505 4b1649c86b35cd1a08bcdabf2ec029d2 241 Pfam PF00691 OmpA family 124 197 4.0E-11 T 31-10-2018 IPR006665 OmpA-like domain DY252_05775 11f1bf4a7839375df75998aba95f4858 337 Pfam PF04860 Phage portal protein 94 314 5.4E-14 T 31-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein DY252_05775 11f1bf4a7839375df75998aba95f4858 337 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 47 320 2.4E-66 T 31-10-2018 IPR006430 Phage portal protein PBSX family DY252_05775 11f1bf4a7839375df75998aba95f4858 337 PIRSF PIRSF018494 1 337 2.7E-134 T 31-10-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria DY252_05650 7aa90a45814d8078bab4bd6d432a73bf 794 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 198 545 4.9E-89 T 31-10-2018 IPR010090 Phage tail tape measure protein DY252_05650 7aa90a45814d8078bab4bd6d432a73bf 794 Pfam PF10145 Phage-related minor tail protein 239 437 3.9E-50 T 31-10-2018 IPR010090 Phage tail tape measure protein DY252_04555 34733ce4f6bceba8d4c41c593fae5141 401 SUPERFAMILY SSF103473 5 388 8.37E-42 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_04555 34733ce4f6bceba8d4c41c593fae5141 401 Gene3D G3DSA:1.20.1250.20 196 392 4.2E-23 T 31-10-2018 DY252_04555 34733ce4f6bceba8d4c41c593fae5141 401 Pfam PF07690 Major Facilitator Superfamily 13 352 2.4E-22 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_04555 34733ce4f6bceba8d4c41c593fae5141 401 Gene3D G3DSA:1.20.1250.20 2 187 1.9E-15 T 31-10-2018 DY252_16105 183771dd780ad19708d625ce701e91f1 385 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 203 373 1.8E-16 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_16105 183771dd780ad19708d625ce701e91f1 385 Gene3D G3DSA:1.10.3720.10 179 374 1.9E-8 T 31-10-2018 IPR035906 MetI-like superfamily DY252_16105 183771dd780ad19708d625ce701e91f1 385 SUPERFAMILY SSF161098 192 359 4.36E-14 T 31-10-2018 IPR035906 MetI-like superfamily DY252_05645 0e5e9e2a3494ce22e0c806a5c44bf71f 139 PIRSF PIRSF029208 1 138 2.8E-47 T 31-10-2018 IPR016912 Bacteriophage P2, GpU DY252_05645 0e5e9e2a3494ce22e0c806a5c44bf71f 139 Pfam PF06995 Phage P2 GpU 6 124 1.0E-43 T 31-10-2018 IPR009734 Myoviridae, GpU DY252_08355 d12cbf3c3ce239a9e22b64215ddf5c59 145 Gene3D G3DSA:3.30.720.120 2 53 2.4E-11 T 31-10-2018 DY252_08355 d12cbf3c3ce239a9e22b64215ddf5c59 145 SUPERFAMILY SSF54593 9 122 3.89E-20 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_08355 d12cbf3c3ce239a9e22b64215ddf5c59 145 Gene3D G3DSA:3.30.720.110 71 124 2.8E-19 T 31-10-2018 DY252_08355 d12cbf3c3ce239a9e22b64215ddf5c59 145 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 120 7.1E-6 T 31-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DY252_00300 c21efbca5d733dc7f59521ee6b835ef0 130 Gene3D G3DSA:1.20.1550.10 1 92 6.3E-11 T 31-10-2018 IPR023380 DsbB-like superfamily DY252_00300 c21efbca5d733dc7f59521ee6b835ef0 130 PIRSF PIRSF036659 1 130 2.0E-45 T 31-10-2018 IPR012187 Disulphide bond formation protein BdbC DY252_00300 c21efbca5d733dc7f59521ee6b835ef0 130 SUPERFAMILY SSF158442 2 124 9.15E-28 T 31-10-2018 IPR023380 DsbB-like superfamily DY252_00300 c21efbca5d733dc7f59521ee6b835ef0 130 Pfam PF02600 Disulfide bond formation protein DsbB 3 121 1.2E-10 T 31-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 DY252_10815 d3c6dc21d6496e61d13d9fa5d1418e1b 312 SUPERFAMILY SSF55729 94 281 1.48E-17 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_10815 d3c6dc21d6496e61d13d9fa5d1418e1b 312 Gene3D G3DSA:3.40.630.30 46 283 3.0E-20 T 31-10-2018 DY252_11825 2bfc117a9ef38dff9761275cdc88f6d2 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 301 7.3E-37 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_00495 77cd987a4947cf6c0bbd1a7b049911b1 538 SUPERFAMILY SSF53098 148 324 2.73E-12 T 31-10-2018 IPR012337 Ribonuclease H-like superfamily DY252_00495 77cd987a4947cf6c0bbd1a7b049911b1 538 Gene3D G3DSA:3.30.420.10 147 349 6.9E-8 T 31-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DY252_00495 77cd987a4947cf6c0bbd1a7b049911b1 538 Pfam PF00665 Integrase core domain 153 289 7.3E-8 T 31-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DY252_02815 8eeb3b434786bd3092c307e35b9797fe 501 Pfam PF03237 Terminase-like family 53 186 4.5E-10 T 31-10-2018 IPR004921 Terminase large subunit, T4likevirus-type DY252_02815 8eeb3b434786bd3092c307e35b9797fe 501 Gene3D G3DSA:3.30.420.280 296 490 3.3E-17 T 31-10-2018 DY252_02815 8eeb3b434786bd3092c307e35b9797fe 501 SUPERFAMILY SSF52540 32 177 1.13E-8 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_02815 8eeb3b434786bd3092c307e35b9797fe 501 Gene3D G3DSA:3.40.50.300 44 260 6.5E-21 T 31-10-2018 DY252_00710 81fdddee51666642cadcca9136128093 324 Pfam PF13432 Tetratricopeptide repeat 12 74 2.3E-9 T 31-10-2018 DY252_00710 81fdddee51666642cadcca9136128093 324 SMART SM00028 8 41 38.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_00710 81fdddee51666642cadcca9136128093 324 SMART SM00028 42 75 0.11 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_00710 81fdddee51666642cadcca9136128093 324 SUPERFAMILY SSF48452 12 76 1.76E-12 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_00710 81fdddee51666642cadcca9136128093 324 Gene3D G3DSA:1.25.40.10 2 87 1.9E-13 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_00710 81fdddee51666642cadcca9136128093 324 Pfam PF13489 Methyltransferase domain 126 259 9.5E-15 T 31-10-2018 DY252_00710 81fdddee51666642cadcca9136128093 324 Gene3D G3DSA:3.40.50.150 105 286 1.8E-30 T 31-10-2018 DY252_00710 81fdddee51666642cadcca9136128093 324 SUPERFAMILY SSF53335 98 274 1.03E-33 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_11370 8160dfc095e26e82f35ffd2b456e150a 320 SUPERFAMILY SSF53686 7 311 2.1E-75 T 31-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DY252_11370 8160dfc095e26e82f35ffd2b456e150a 320 Gene3D G3DSA:3.40.50.1100 14 307 4.0E-80 T 31-10-2018 DY252_11370 8160dfc095e26e82f35ffd2b456e150a 320 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 303 1.6E-61 T 31-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DY252_11370 8160dfc095e26e82f35ffd2b456e150a 320 Gene3D G3DSA:3.40.50.1100 50 147 4.0E-80 T 31-10-2018 DY252_08980 00235f7278d1bed64c56d9ac8d8cb5eb 100 Pfam PF00276 Ribosomal protein L23 11 96 8.5E-32 T 31-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 DY252_08980 00235f7278d1bed64c56d9ac8d8cb5eb 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 10 99 21.941 T 31-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 DY252_08980 00235f7278d1bed64c56d9ac8d8cb5eb 100 SUPERFAMILY SSF54189 9 98 6.12E-32 T 31-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 DY252_08980 00235f7278d1bed64c56d9ac8d8cb5eb 100 Gene3D G3DSA:3.30.70.330 3 100 4.5E-34 T 31-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DY252_12185 95bb3af9d5a62af1839d8a555e1e81c0 350 SUPERFAMILY SSF51261 218 343 1.62E-41 T 31-10-2018 IPR011055 Duplicated hybrid motif DY252_12185 95bb3af9d5a62af1839d8a555e1e81c0 350 Gene3D G3DSA:2.70.70.10 178 345 5.0E-38 T 31-10-2018 IPR011055 Duplicated hybrid motif DY252_12185 95bb3af9d5a62af1839d8a555e1e81c0 350 SUPERFAMILY SSF54106 59 103 2.49E-8 T 31-10-2018 DY252_12185 95bb3af9d5a62af1839d8a555e1e81c0 350 Gene3D G3DSA:3.10.350.10 56 103 1.8E-9 T 31-10-2018 IPR036779 LysM domain superfamily DY252_12185 95bb3af9d5a62af1839d8a555e1e81c0 350 SMART SM00257 59 103 1.1E-8 T 31-10-2018 IPR018392 LysM domain DY252_12185 95bb3af9d5a62af1839d8a555e1e81c0 350 Pfam PF01551 Peptidase family M23 244 339 2.0E-26 T 31-10-2018 IPR016047 Peptidase M23 DY252_12185 95bb3af9d5a62af1839d8a555e1e81c0 350 Pfam PF01476 LysM domain 60 103 1.6E-11 T 31-10-2018 IPR018392 LysM domain DY252_10215 0144a72a5334ba77bf6105d30523b49e 368 Pfam PF13416 Bacterial extracellular solute-binding protein 43 325 3.4E-34 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_10215 0144a72a5334ba77bf6105d30523b49e 368 PIRSF PIRSF019574 1 368 2.5E-126 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_10215 0144a72a5334ba77bf6105d30523b49e 368 Gene3D G3DSA:3.40.190.10 134 362 1.2E-131 T 31-10-2018 DY252_10215 0144a72a5334ba77bf6105d30523b49e 368 Gene3D G3DSA:3.40.190.10 30 336 1.2E-131 T 31-10-2018 DY252_10215 0144a72a5334ba77bf6105d30523b49e 368 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 5.0E-56 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_10215 0144a72a5334ba77bf6105d30523b49e 368 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 49 70 5.0E-56 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_10215 0144a72a5334ba77bf6105d30523b49e 368 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 33 49 5.0E-56 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_10215 0144a72a5334ba77bf6105d30523b49e 368 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 125 141 5.0E-56 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_10215 0144a72a5334ba77bf6105d30523b49e 368 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 5.0E-56 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_10215 0144a72a5334ba77bf6105d30523b49e 368 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 170 5.0E-56 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_10215 0144a72a5334ba77bf6105d30523b49e 368 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 217 236 5.0E-56 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_10215 0144a72a5334ba77bf6105d30523b49e 368 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 312 338 5.0E-56 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_10215 0144a72a5334ba77bf6105d30523b49e 368 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 179 198 5.0E-56 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_10215 0144a72a5334ba77bf6105d30523b49e 368 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 267 286 5.0E-56 T 31-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DY252_10215 0144a72a5334ba77bf6105d30523b49e 368 SUPERFAMILY SSF53850 27 367 3.07E-100 T 31-10-2018 DY252_09795 e02e20500c5182731a32b39e1daa7227 169 Pfam PF05163 DinB family 12 165 1.1E-24 T 31-10-2018 IPR007837 DNA damage-inducible protein DinB DY252_09795 e02e20500c5182731a32b39e1daa7227 169 SUPERFAMILY SSF109854 12 147 5.86E-28 T 31-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DY252_09795 e02e20500c5182731a32b39e1daa7227 169 Gene3D G3DSA:1.20.120.450 7 163 2.3E-33 T 31-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DY252_19320 f1304cdf9c6cfc27b9157f67897ca2c0 319 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 302 1.4E-40 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_10825 cf562a20834b2105a339554e0a23d573 257 Pfam PF00483 Nucleotidyl transferase 2 208 9.9E-20 T 31-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DY252_10825 cf562a20834b2105a339554e0a23d573 257 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 256 2.0E-142 T 31-10-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 DY252_10825 cf562a20834b2105a339554e0a23d573 257 Gene3D G3DSA:3.90.550.10 1 257 5.0E-73 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_10825 cf562a20834b2105a339554e0a23d573 257 SUPERFAMILY SSF53448 1 257 2.5E-68 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_14900 6df9bc88b2743ef1f5293aaa87ff7b6c 253 Gene3D G3DSA:3.40.30.10 79 249 5.8E-44 T 31-10-2018 DY252_14900 6df9bc88b2743ef1f5293aaa87ff7b6c 253 SUPERFAMILY SSF52833 80 246 1.07E-40 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_14900 6df9bc88b2743ef1f5293aaa87ff7b6c 253 Pfam PF13462 Thioredoxin 91 246 4.8E-26 T 31-10-2018 IPR012336 Thioredoxin-like fold DY252_20245 87bdebad00d957d2c881d271b58c9457 743 SUPERFAMILY SSF52540 235 632 5.82E-27 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_20245 87bdebad00d957d2c881d271b58c9457 743 Pfam PF00270 DEAD/DEAH box helicase 233 378 2.3E-13 T 31-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DY252_20245 87bdebad00d957d2c881d271b58c9457 743 Hamap MF_00983 Probable primosomal protein N' [priA]. 27 742 23.36 T 31-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 DY252_20245 87bdebad00d957d2c881d271b58c9457 743 SMART SM00490 510 606 2.3E-4 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_20245 87bdebad00d957d2c881d271b58c9457 743 TIGRFAM TIGR00595 priA: primosomal protein N' 235 740 7.7E-193 T 31-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 DY252_20245 87bdebad00d957d2c881d271b58c9457 743 SMART SM00487 207 406 6.9E-21 T 31-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DY252_20245 87bdebad00d957d2c881d271b58c9457 743 Gene3D G3DSA:3.40.50.300 203 392 1.8E-66 T 31-10-2018 DY252_20245 87bdebad00d957d2c881d271b58c9457 743 Gene3D G3DSA:1.10.8.630 24 130 3.8E-20 T 31-10-2018 DY252_20245 87bdebad00d957d2c881d271b58c9457 743 Pfam PF00271 Helicase conserved C-terminal domain 524 605 2.3E-5 T 31-10-2018 IPR001650 Helicase, C-terminal DY252_20245 87bdebad00d957d2c881d271b58c9457 743 SUPERFAMILY SSF52540 208 389 2.99E-37 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_16730 d338cd0d96d6f862f4e9b988fa4e5425 152 SMART SM00347 33 131 4.3E-23 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_16730 d338cd0d96d6f862f4e9b988fa4e5425 152 Pfam PF01047 MarR family 40 98 3.6E-19 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_16730 d338cd0d96d6f862f4e9b988fa4e5425 152 SUPERFAMILY SSF46785 5 146 1.52E-34 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_16730 d338cd0d96d6f862f4e9b988fa4e5425 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 9.5E-7 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_16730 d338cd0d96d6f862f4e9b988fa4e5425 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 73 9.5E-7 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_16730 d338cd0d96d6f862f4e9b988fa4e5425 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 9.5E-7 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_16730 d338cd0d96d6f862f4e9b988fa4e5425 152 Gene3D G3DSA:1.10.10.10 4 147 3.1E-36 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_20655 2630203121393ffa2b43f556a0a1e8b1 303 Pfam PF05853 beta-keto acid cleavage enzyme 9 297 8.8E-98 T 31-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 DY252_20655 2630203121393ffa2b43f556a0a1e8b1 303 Gene3D G3DSA:3.20.20.70 6 300 9.6E-104 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_02910 217b6980c5c9f89a67c7bd46e8ac3e2e 96 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 3 91 6.9E-31 T 31-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 DY252_02910 217b6980c5c9f89a67c7bd46e8ac3e2e 96 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 1 94 23.975 T 31-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 DY252_02910 217b6980c5c9f89a67c7bd46e8ac3e2e 96 SUPERFAMILY SSF55248 2 92 2.62E-33 T 31-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 DY252_02910 217b6980c5c9f89a67c7bd46e8ac3e2e 96 Gene3D G3DSA:3.30.1360.20 1 95 2.0E-36 T 31-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 DY252_15870 8da618f605f883d9a0f4cdc350287c69 315 Gene3D G3DSA:3.30.420.300 2 87 1.2E-24 T 31-10-2018 DY252_15870 8da618f605f883d9a0f4cdc350287c69 315 Gene3D G3DSA:3.30.420.310 88 310 1.2E-67 T 31-10-2018 DY252_15870 8da618f605f883d9a0f4cdc350287c69 315 Pfam PF05035 2-keto-3-deoxy-galactonokinase 13 303 2.8E-91 T 31-10-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 DY252_12720 7662ebb3ff7ae12d342a464c27865057 133 Hamap MF_01255 L-ectoine synthase [ectC]. 1 128 37.251 T 31-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 DY252_12720 7662ebb3ff7ae12d342a464c27865057 133 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 118 1.0E-42 T 31-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 DY252_12720 7662ebb3ff7ae12d342a464c27865057 133 Gene3D G3DSA:2.60.120.10 1 116 6.9E-45 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_12720 7662ebb3ff7ae12d342a464c27865057 133 Pfam PF06339 Ectoine synthase 1 126 3.5E-59 T 31-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 DY252_12720 7662ebb3ff7ae12d342a464c27865057 133 SUPERFAMILY SSF51182 17 127 4.16E-20 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_21410 c806804775663d5cfc9ab4923108a2ea 507 Pfam PF13638 PIN domain 11 152 5.4E-8 T 31-10-2018 IPR002716 PIN domain DY252_21410 c806804775663d5cfc9ab4923108a2ea 507 Gene3D G3DSA:3.40.50.1010 7 162 1.1E-8 T 31-10-2018 DY252_03300 c15238b140326855b9f67e79fb1aca12 182 Gene3D G3DSA:1.10.1760.20 1 177 7.7E-50 T 31-10-2018 DY252_03300 c15238b140326855b9f67e79fb1aca12 182 PIRSF PIRSF016661 1 180 3.4E-42 T 31-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 DY252_03300 c15238b140326855b9f67e79fb1aca12 182 Pfam PF02632 BioY family 30 172 7.2E-32 T 31-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 DY252_05700 502ba187d17e11affb1dbcc2e16f5cfa 115 Gene3D G3DSA:3.10.450.40 3 109 2.9E-17 T 31-10-2018 DY252_05700 502ba187d17e11affb1dbcc2e16f5cfa 115 SUPERFAMILY SSF160719 10 107 4.18E-24 T 31-10-2018 DY252_05700 502ba187d17e11affb1dbcc2e16f5cfa 115 Pfam PF04965 Gene 25-like lysozyme 15 97 1.5E-14 T 31-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD DY252_00385 e8ea2aeb9b75897bb3c72d1b515ec64c 193 Pfam PF08534 Redoxin 54 176 8.6E-20 T 31-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DY252_00385 e8ea2aeb9b75897bb3c72d1b515ec64c 193 SUPERFAMILY SSF52833 41 189 3.6E-37 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_00385 e8ea2aeb9b75897bb3c72d1b515ec64c 193 ProSitePatterns PS00194 Thioredoxin family active site. 79 97 - T 31-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DY252_00385 e8ea2aeb9b75897bb3c72d1b515ec64c 193 Gene3D G3DSA:3.40.30.10 21 191 8.2E-44 T 31-10-2018 DY252_08735 a37218de580620480cbf4b44b57a559b 312 TIGRFAM TIGR00749 glk: glucokinase 3 307 1.8E-77 T 31-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 DY252_08735 a37218de580620480cbf4b44b57a559b 312 Hamap MF_00524 Glucokinase [glk]. 1 312 30.466 T 31-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 DY252_08735 a37218de580620480cbf4b44b57a559b 312 Gene3D G3DSA:3.40.367.20 97 296 5.1E-94 T 31-10-2018 DY252_08735 a37218de580620480cbf4b44b57a559b 312 Gene3D G3DSA:3.30.420.40 3 307 5.1E-94 T 31-10-2018 DY252_08735 a37218de580620480cbf4b44b57a559b 312 SUPERFAMILY SSF53067 3 309 9.16E-60 T 31-10-2018 DY252_08735 a37218de580620480cbf4b44b57a559b 312 Pfam PF02685 Glucokinase 3 310 2.0E-99 T 31-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 DY252_14065 a0d32c36e8c079215e8e423a8e9cab38 247 SUPERFAMILY SSF52833 35 118 1.26E-20 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_14065 a0d32c36e8c079215e8e423a8e9cab38 247 Gene3D G3DSA:3.40.30.10 15 132 1.6E-17 T 31-10-2018 DY252_14065 a0d32c36e8c079215e8e423a8e9cab38 247 Pfam PF13410 Glutathione S-transferase, C-terminal domain 155 216 1.0E-8 T 31-10-2018 DY252_14065 a0d32c36e8c079215e8e423a8e9cab38 247 SUPERFAMILY SSF47616 124 237 8.91E-17 T 31-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DY252_14065 a0d32c36e8c079215e8e423a8e9cab38 247 Pfam PF13417 Glutathione S-transferase, N-terminal domain 37 105 2.7E-17 T 31-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DY252_14065 a0d32c36e8c079215e8e423a8e9cab38 247 Gene3D G3DSA:1.20.1050.10 135 228 2.1E-9 T 31-10-2018 DY252_12065 52cc7a7e6218c9a1e4cadb3641491e46 108 SUPERFAMILY SSF52821 3 99 8.92E-27 T 31-10-2018 IPR036873 Rhodanese-like domain superfamily DY252_12065 52cc7a7e6218c9a1e4cadb3641491e46 108 SMART SM00450 7 102 2.0E-16 T 31-10-2018 IPR001763 Rhodanese-like domain DY252_12065 52cc7a7e6218c9a1e4cadb3641491e46 108 Pfam PF00581 Rhodanese-like domain 9 98 1.1E-11 T 31-10-2018 IPR001763 Rhodanese-like domain DY252_12065 52cc7a7e6218c9a1e4cadb3641491e46 108 Gene3D G3DSA:3.40.250.10 4 99 4.9E-23 T 31-10-2018 IPR036873 Rhodanese-like domain superfamily DY252_17670 bf8ce85c28eae962c38975997261da23 120 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 45 115 3.3E-25 T 31-10-2018 IPR001543 Surface presentation of antigen (SpoA) DY252_17670 bf8ce85c28eae962c38975997261da23 120 PRINTS PR00956 Flagellar motor switch protein FliN signature 62 78 2.3E-24 T 31-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DY252_17670 bf8ce85c28eae962c38975997261da23 120 PRINTS PR00956 Flagellar motor switch protein FliN signature 78 91 2.3E-24 T 31-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DY252_17670 bf8ce85c28eae962c38975997261da23 120 PRINTS PR00956 Flagellar motor switch protein FliN signature 91 106 2.3E-24 T 31-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DY252_17670 bf8ce85c28eae962c38975997261da23 120 PRINTS PR00956 Flagellar motor switch protein FliN signature 45 61 2.3E-24 T 31-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DY252_17670 bf8ce85c28eae962c38975997261da23 120 Gene3D G3DSA:2.30.330.10 31 120 2.8E-31 T 31-10-2018 IPR036429 SpoA-like superfamily DY252_17670 bf8ce85c28eae962c38975997261da23 120 SUPERFAMILY SSF101801 42 119 5.36E-23 T 31-10-2018 IPR036429 SpoA-like superfamily DY252_17670 bf8ce85c28eae962c38975997261da23 120 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 43 117 3.2E-31 T 31-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 DY252_04605 4cc7393de4f2bf13c812f6112d483ee8 134 PIRSF PIRSF016789 4 125 3.7E-38 T 31-10-2018 IPR007401 Protein of unknown function DUF454 DY252_04605 4cc7393de4f2bf13c812f6112d483ee8 134 Pfam PF04304 Protein of unknown function (DUF454) 7 118 1.1E-38 T 31-10-2018 IPR007401 Protein of unknown function DUF454 DY252_04170 aa24f1a0ee9568c478b1e10e3380b2b1 276 SUPERFAMILY SSF161098 80 262 2.88E-26 T 31-10-2018 IPR035906 MetI-like superfamily DY252_04170 aa24f1a0ee9568c478b1e10e3380b2b1 276 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 69 267 4.3E-68 T 31-10-2018 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 DY252_04170 aa24f1a0ee9568c478b1e10e3380b2b1 276 Gene3D G3DSA:1.10.3720.10 83 272 1.2E-19 T 31-10-2018 IPR035906 MetI-like superfamily DY252_04170 aa24f1a0ee9568c478b1e10e3380b2b1 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 266 3.9E-19 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_02330 3de0173cf141b44da5ed1ee680f5fd0c 285 Gene3D G3DSA:3.40.50.1980 145 282 1.1E-32 T 31-10-2018 DY252_02330 3de0173cf141b44da5ed1ee680f5fd0c 285 SUPERFAMILY SSF53807 25 278 1.69E-45 T 31-10-2018 DY252_02330 3de0173cf141b44da5ed1ee680f5fd0c 285 Gene3D G3DSA:3.40.50.1980 26 144 1.9E-33 T 31-10-2018 DY252_02330 3de0173cf141b44da5ed1ee680f5fd0c 285 Pfam PF01497 Periplasmic binding protein 30 257 3.0E-29 T 31-10-2018 IPR002491 ABC transporter periplasmic binding domain DY252_13240 ac25e2da5963fc4fd47404f14a9fcab2 404 Pfam PF04748 Divergent polysaccharide deacetylase 183 394 1.5E-79 T 31-10-2018 IPR006837 Divergent polysaccharide deacetylase DY252_13240 ac25e2da5963fc4fd47404f14a9fcab2 404 Gene3D G3DSA:3.20.20.370 163 402 2.4E-89 T 31-10-2018 DY252_13240 ac25e2da5963fc4fd47404f14a9fcab2 404 SUPERFAMILY SSF88713 178 395 5.72E-73 T 31-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DY252_19375 26b516cea3ef0f4abe4d876a2740764c 384 Gene3D G3DSA:3.40.50.1970 1 183 1.5E-51 T 31-10-2018 DY252_19375 26b516cea3ef0f4abe4d876a2740764c 384 Gene3D G3DSA:1.20.1090.10 184 383 5.3E-57 T 31-10-2018 DY252_19375 26b516cea3ef0f4abe4d876a2740764c 384 SUPERFAMILY SSF56796 3 382 3.4E-112 T 31-10-2018 DY252_19375 26b516cea3ef0f4abe4d876a2740764c 384 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 373 5.5E-108 T 31-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DY252_14310 3ae77ffb92601d1508bc848ea9dc0efd 354 SUPERFAMILY SSF110997 269 345 1.05E-13 T 31-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DY252_14310 3ae77ffb92601d1508bc848ea9dc0efd 354 Gene3D G3DSA:3.30.70.1070 271 344 7.6E-13 T 31-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DY252_14310 3ae77ffb92601d1508bc848ea9dc0efd 354 Pfam PF05036 Sporulation related domain 268 345 8.7E-16 T 31-10-2018 IPR007730 Sporulation-like domain GO:0042834 DY252_12460 9288fc7f94ca8f01ba798fc9974efea0 247 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 45 198 1.2E-42 T 31-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DY252_11780 0c0a78d57f571a1ddbd473cf52f44212 270 SMART SM00563 78 193 2.2E-15 T 31-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DY252_11780 0c0a78d57f571a1ddbd473cf52f44212 270 SUPERFAMILY SSF69593 24 266 1.31E-19 T 31-10-2018 DY252_11780 0c0a78d57f571a1ddbd473cf52f44212 270 Pfam PF01553 Acyltransferase 66 189 1.6E-16 T 31-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DY252_13100 4613aa090b0079ce27147ca33c401beb 182 SUPERFAMILY SSF55083 17 175 9.16E-45 T 31-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DY252_13100 4613aa090b0079ce27147ca33c401beb 182 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 19 150 1.4E-34 T 31-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DY252_13100 4613aa090b0079ce27147ca33c401beb 182 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 19 150 1.8E-31 T 31-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DY252_13100 4613aa090b0079ce27147ca33c401beb 182 Gene3D G3DSA:3.30.70.560 15 181 6.1E-54 T 31-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DY252_13100 4613aa090b0079ce27147ca33c401beb 182 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 106 117 - T 31-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DY252_00675 3e86fd17ca0bbdb3444484f9a77a9dde 389 Pfam PF00155 Aminotransferase class I and II 33 381 5.2E-51 T 31-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DY252_00675 3e86fd17ca0bbdb3444484f9a77a9dde 389 SUPERFAMILY SSF53383 23 386 2.23E-91 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_00675 3e86fd17ca0bbdb3444484f9a77a9dde 389 Gene3D G3DSA:3.90.1150.10 28 381 2.5E-94 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_00675 3e86fd17ca0bbdb3444484f9a77a9dde 389 Gene3D G3DSA:3.40.640.10 64 283 2.5E-94 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_02405 032ee9a21a962841da7a41ff91ee5334 337 Pfam PF00953 Glycosyl transferase family 4 78 228 1.1E-25 T 31-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 DY252_01335 1877a51d6b6c33fb50518abafe1c7b82 168 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 55 157 9.3E-8 T 31-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like DY252_01335 1877a51d6b6c33fb50518abafe1c7b82 168 Gene3D G3DSA:3.30.530.20 6 160 2.8E-23 T 31-10-2018 IPR023393 START-like domain superfamily DY252_01335 1877a51d6b6c33fb50518abafe1c7b82 168 SUPERFAMILY SSF55961 7 156 2.3E-15 T 31-10-2018 DY252_15095 753a74d004a0cabdf1064ccf5182f0c7 270 Gene3D G3DSA:1.10.12.10 212 270 8.0E-22 T 31-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DY252_15095 753a74d004a0cabdf1064ccf5182f0c7 270 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 269 3.9E-60 T 31-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DY252_15095 753a74d004a0cabdf1064ccf5182f0c7 270 SUPERFAMILY SSF52096 14 269 1.07E-78 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_15095 753a74d004a0cabdf1064ccf5182f0c7 270 Gene3D G3DSA:3.90.226.10 12 211 4.9E-67 T 31-10-2018 DY252_17230 10c651fd0a48c825d4a3373a3936d11f 326 Gene3D G3DSA:1.10.10.60 221 325 9.6E-34 T 31-10-2018 DY252_17230 10c651fd0a48c825d4a3373a3936d11f 326 Pfam PF12833 Helix-turn-helix domain 244 323 9.4E-23 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_17230 10c651fd0a48c825d4a3373a3936d11f 326 SMART SM00342 237 322 2.8E-19 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_17230 10c651fd0a48c825d4a3373a3936d11f 326 Pfam PF14525 AraC-binding-like domain 19 195 3.0E-15 T 31-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like DY252_17230 10c651fd0a48c825d4a3373a3936d11f 326 SUPERFAMILY SSF46689 222 271 3.99E-8 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_01000 ee75cdf7ae70600297bf03897f29b375 376 Gene3D G3DSA:3.40.50.1980 23 370 2.4E-107 T 31-10-2018 DY252_01000 ee75cdf7ae70600297bf03897f29b375 376 SUPERFAMILY SSF53807 24 341 1.77E-49 T 31-10-2018 DY252_01000 ee75cdf7ae70600297bf03897f29b375 376 Pfam PF01497 Periplasmic binding protein 91 312 3.0E-22 T 31-10-2018 IPR002491 ABC transporter periplasmic binding domain DY252_16790 5764c17307a5f1858f89e5318cb6d840 458 Pfam PF03929 PepSY-associated TM region 21 398 1.1E-65 T 31-10-2018 IPR005625 PepSY-associated TM protein DY252_07660 99138f38a3908f4d9a2dcf50761d73a3 112 Pfam PF05284 Protein of unknown function (DUF736) 5 107 4.8E-23 T 31-10-2018 IPR007948 Protein of unknown function DUF736 DY252_02115 9b7b7e87c97178ae2e91388f274e9899 385 Gene3D G3DSA:3.40.50.2300 2 102 5.6E-16 T 31-10-2018 DY252_02115 9b7b7e87c97178ae2e91388f274e9899 385 SUPERFAMILY SSF52172 7 95 6.97E-16 T 31-10-2018 IPR011006 CheY-like superfamily DY252_02115 9b7b7e87c97178ae2e91388f274e9899 385 Gene3D G3DSA:1.10.3210.10 122 352 8.3E-21 T 31-10-2018 DY252_02115 9b7b7e87c97178ae2e91388f274e9899 385 Pfam PF00072 Response regulator receiver domain 10 90 2.7E-12 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_02115 9b7b7e87c97178ae2e91388f274e9899 385 SUPERFAMILY SSF109604 178 339 6.83E-19 T 31-10-2018 DY252_02115 9b7b7e87c97178ae2e91388f274e9899 385 Pfam PF08668 HDOD domain 178 312 3.9E-12 T 31-10-2018 IPR013976 Metal-dependent hydrolase HDOD DY252_03020 518059ed0b05aa32167b7af8abb882a5 324 Pfam PF05982 Na+-dependent bicarbonate transporter superfamily 15 318 5.3E-109 T 31-10-2018 IPR010293 Na+-dependent bicarbonate transporter superfamily DY252_16055 16c3ccd1c3a3eb6a41ab21370b054205 90 Pfam PF09928 Predicted small integral membrane protein (DUF2160) 3 90 5.5E-38 T 31-10-2018 IPR018678 Protein of unknown function DUF2160, transmembrane DY252_09605 816af94907faa5933bf3013644faf7f1 335 Gene3D G3DSA:3.40.190.170 33 334 2.5E-79 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_09605 816af94907faa5933bf3013644faf7f1 335 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 35 318 5.4E-49 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_13635 465a326a24743a6065c79eca315d9947 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 288 6.3E-16 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_13635 465a326a24743a6065c79eca315d9947 295 Gene3D G3DSA:1.10.3720.10 11 286 1.3E-52 T 31-10-2018 IPR035906 MetI-like superfamily DY252_13635 465a326a24743a6065c79eca315d9947 295 SUPERFAMILY SSF161098 16 295 4.19E-63 T 31-10-2018 IPR035906 MetI-like superfamily DY252_18235 8a56606a9727145e84220b0738b17679 430 Gene3D G3DSA:3.40.50.11720 34 210 4.4E-44 T 31-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 DY252_18235 8a56606a9727145e84220b0738b17679 430 SUPERFAMILY SSF53756 53 405 8.27E-10 T 31-10-2018 DY252_18235 8a56606a9727145e84220b0738b17679 430 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 210 9.4E-57 T 31-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 DY252_18235 8a56606a9727145e84220b0738b17679 430 Gene3D G3DSA:3.40.50.2000 216 401 3.7E-60 T 31-10-2018 DY252_19730 55a270100a2ff7ad283867b52a14f2e1 149 SUPERFAMILY SSF50800 5 146 1.1E-29 T 31-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily DY252_19730 55a270100a2ff7ad283867b52a14f2e1 149 Gene3D G3DSA:2.40.33.20 4 148 1.8E-14 T 31-10-2018 DY252_19730 55a270100a2ff7ad283867b52a14f2e1 149 Pfam PF03473 MOSC domain 45 146 6.4E-5 T 31-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 DY252_01245 3db9b7aa797c9741c0925334c0ffce5b 193 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 1 193 42.772 T 31-10-2018 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 DY252_01245 3db9b7aa797c9741c0925334c0ffce5b 193 Pfam PF00881 Nitroreductase family 15 171 4.3E-9 T 31-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DY252_01245 3db9b7aa797c9741c0925334c0ffce5b 193 Gene3D G3DSA:3.40.109.10 3 191 3.5E-23 T 31-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DY252_01245 3db9b7aa797c9741c0925334c0ffce5b 193 SUPERFAMILY SSF55469 13 188 8.9E-37 T 31-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DY252_18870 f7d9b81ae13589ae5eea6b81aa990fb8 453 Pfam PF03200 Glycosyl hydrolase family 63 C-terminal domain 28 170 1.7E-5 T 31-10-2018 IPR031335 Glycosyl hydrolase family 63, C-terminal KEGG: 00510+3.2.1.106|MetaCyc: PWY-7918|MetaCyc: PWY-7919|Reactome: R-HSA-4793954|Reactome: R-HSA-532668 DY252_18870 f7d9b81ae13589ae5eea6b81aa990fb8 453 SUPERFAMILY SSF48208 21 426 3.57E-71 T 31-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DY252_18870 f7d9b81ae13589ae5eea6b81aa990fb8 453 Gene3D G3DSA:1.50.10.10 10 427 2.0E-113 T 31-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DY252_18870 f7d9b81ae13589ae5eea6b81aa990fb8 453 Pfam PF01204 Trehalase 237 386 2.7E-7 T 31-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 DY252_02890 1c343abfef03891b49dbc7f38f82b60d 115 SUPERFAMILY SSF46785 25 105 3.09E-18 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_02890 1c343abfef03891b49dbc7f38f82b60d 115 Gene3D G3DSA:1.10.10.10 8 112 5.6E-19 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_02890 1c343abfef03891b49dbc7f38f82b60d 115 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 3.1E-8 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_02890 1c343abfef03891b49dbc7f38f82b60d 115 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 3.1E-8 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_02890 1c343abfef03891b49dbc7f38f82b60d 115 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 3.1E-8 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_02890 1c343abfef03891b49dbc7f38f82b60d 115 Pfam PF01047 MarR family 29 88 3.5E-12 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_02890 1c343abfef03891b49dbc7f38f82b60d 115 SMART SM00347 23 115 0.001 T 31-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DY252_04735 dfef9745c0074c7fc98b1b6d71956c71 313 SUPERFAMILY SSF103481 40 141 8.89E-7 T 31-10-2018 DY252_04735 dfef9745c0074c7fc98b1b6d71956c71 313 Pfam PF00892 EamA-like transporter family 6 139 6.8E-8 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_04735 dfef9745c0074c7fc98b1b6d71956c71 313 Pfam PF00892 EamA-like transporter family 154 284 2.1E-8 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_04735 dfef9745c0074c7fc98b1b6d71956c71 313 SUPERFAMILY SSF103481 195 287 4.97E-8 T 31-10-2018 DY252_13615 8ad3fd77f1c0367709a34c80c59ab0aa 172 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 4 121 4.0E-14 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_13615 8ad3fd77f1c0367709a34c80c59ab0aa 172 Gene3D G3DSA:3.30.70.1230 1 162 4.9E-34 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_13615 8ad3fd77f1c0367709a34c80c59ab0aa 172 SUPERFAMILY SSF55073 2 158 8.48E-34 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_15085 998a207a3039052966fec8bd8c123094 272 SUPERFAMILY SSF53850 61 247 3.26E-6 T 31-10-2018 DY252_04090 c110aebd9a3db84a765a415dfc80a455 165 SUPERFAMILY SSF88659 86 160 1.66E-14 T 31-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DY252_04090 c110aebd9a3db84a765a415dfc80a455 165 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 161 1.8E-23 T 31-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DY252_04090 c110aebd9a3db84a765a415dfc80a455 165 Pfam PF08281 Sigma-70, region 4 108 160 7.3E-17 T 31-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DY252_04090 c110aebd9a3db84a765a415dfc80a455 165 Gene3D G3DSA:1.10.10.10 90 165 1.8E-13 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_04090 c110aebd9a3db84a765a415dfc80a455 165 SUPERFAMILY SSF88946 7 95 8.24E-12 T 31-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DY252_04090 c110aebd9a3db84a765a415dfc80a455 165 Pfam PF04542 Sigma-70 region 2 9 77 1.1E-11 T 31-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DY252_04090 c110aebd9a3db84a765a415dfc80a455 165 Gene3D G3DSA:1.10.1740.10 4 74 1.0E-6 T 31-10-2018 DY252_05225 b01e70e67b42b462b67117b8e076d068 186 Gene3D G3DSA:3.40.50.880 3 185 2.2E-50 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_05225 b01e70e67b42b462b67117b8e076d068 186 SUPERFAMILY SSF52317 7 174 1.53E-45 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_05225 b01e70e67b42b462b67117b8e076d068 186 Pfam PF01965 DJ-1/PfpI family 8 175 4.1E-47 T 31-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DY252_05225 b01e70e67b42b462b67117b8e076d068 186 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 8 174 2.2E-50 T 31-10-2018 IPR006286 Deglycase PfpI DY252_04085 67317dfff19db0acf773a91ec4f19a53 817 Pfam PF13779 Domain of unknown function (DUF4175) 24 676 1.1E-127 T 31-10-2018 IPR012683 Conserved hypothetical protein CHP02302, transmembrane DY252_04085 67317dfff19db0acf773a91ec4f19a53 817 Pfam PF13779 Domain of unknown function (DUF4175) 661 815 6.9E-29 T 31-10-2018 IPR012683 Conserved hypothetical protein CHP02302, transmembrane DY252_04965 ccb38f6c71eb5c96a812b93e791cfdc8 623 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 556 4.4E-139 T 31-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DY252_04965 ccb38f6c71eb5c96a812b93e791cfdc8 623 SUPERFAMILY SSF56235 1 226 6.43E-64 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_04965 ccb38f6c71eb5c96a812b93e791cfdc8 623 Pfam PF00733 Asparagine synthase 246 616 6.4E-81 T 31-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 DY252_04965 ccb38f6c71eb5c96a812b93e791cfdc8 623 Gene3D G3DSA:3.60.20.10 2 186 5.5E-63 T 31-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DY252_04965 ccb38f6c71eb5c96a812b93e791cfdc8 623 PIRSF PIRSF001589 1 622 4.0E-150 T 31-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DY252_04965 ccb38f6c71eb5c96a812b93e791cfdc8 623 Pfam PF13537 Glutamine amidotransferase domain 48 167 6.5E-46 T 31-10-2018 IPR017932 Glutamine amidotransferase type 2 domain DY252_04965 ccb38f6c71eb5c96a812b93e791cfdc8 623 SUPERFAMILY SSF52402 236 584 1.55E-67 T 31-10-2018 DY252_05860 e403b10a89f3bd0f620608893ca48dcd 292 Gene3D G3DSA:1.10.3720.10 48 285 3.1E-55 T 31-10-2018 IPR035906 MetI-like superfamily DY252_05860 e403b10a89f3bd0f620608893ca48dcd 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 288 2.4E-17 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_05860 e403b10a89f3bd0f620608893ca48dcd 292 SUPERFAMILY SSF161098 52 278 2.75E-52 T 31-10-2018 IPR035906 MetI-like superfamily DY252_10880 948c0c055f6599f64736cb490e578b33 377 Gene3D G3DSA:1.10.760.10 9 177 1.1E-61 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_10880 948c0c055f6599f64736cb490e578b33 377 SUPERFAMILY SSF46626 15 171 2.2E-33 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_10880 948c0c055f6599f64736cb490e578b33 377 Gene3D G3DSA:1.10.760.10 178 377 7.2E-68 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_10880 948c0c055f6599f64736cb490e578b33 377 Pfam PF03150 Di-haem cytochrome c peroxidase 16 190 6.5E-45 T 31-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 DY252_10880 948c0c055f6599f64736cb490e578b33 377 SUPERFAMILY SSF46626 166 360 3.53E-33 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_09295 9cf89aa35c30f6529ec4c39953759039 132 Pfam PF07883 Cupin domain 42 98 7.7E-11 T 31-10-2018 IPR013096 Cupin 2, conserved barrel DY252_09295 9cf89aa35c30f6529ec4c39953759039 132 Gene3D G3DSA:2.60.120.10 1 130 1.9E-51 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_09295 9cf89aa35c30f6529ec4c39953759039 132 SUPERFAMILY SSF51182 11 129 9.12E-31 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_18820 067a40c38e1c3988b01f9ac02031ffd4 517 Pfam PF00005 ABC transporter 36 183 2.1E-29 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_18820 067a40c38e1c3988b01f9ac02031ffd4 517 SUPERFAMILY SSF52540 264 488 1.61E-40 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18820 067a40c38e1c3988b01f9ac02031ffd4 517 SUPERFAMILY SSF52540 19 243 8.91E-53 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18820 067a40c38e1c3988b01f9ac02031ffd4 517 Gene3D G3DSA:3.40.50.300 265 503 3.6E-38 T 31-10-2018 DY252_18820 067a40c38e1c3988b01f9ac02031ffd4 517 Pfam PF00005 ABC transporter 284 436 4.7E-18 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_18820 067a40c38e1c3988b01f9ac02031ffd4 517 SMART SM00382 292 493 1.6E-7 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_18820 067a40c38e1c3988b01f9ac02031ffd4 517 SMART SM00382 43 231 1.0E-11 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_18820 067a40c38e1c3988b01f9ac02031ffd4 517 Gene3D G3DSA:3.40.50.300 19 256 9.9E-53 T 31-10-2018 DY252_18820 067a40c38e1c3988b01f9ac02031ffd4 517 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_14260 1c5a6a97172774e868670f1be07ef914 99 Pfam PF10048 Predicted integral membrane protein (DUF2282) 29 76 2.4E-26 T 31-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane DY252_02325 7df6d820ccaa6f2ac46d621f4c6cecf6 360 Pfam PF05171 Haemin-degrading HemS.ChuX domain 216 348 6.1E-34 T 31-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 DY252_02325 7df6d820ccaa6f2ac46d621f4c6cecf6 360 Pfam PF05171 Haemin-degrading HemS.ChuX domain 36 164 3.0E-38 T 31-10-2018 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 DY252_02325 7df6d820ccaa6f2ac46d621f4c6cecf6 360 Gene3D G3DSA:3.40.1570.10 16 291 1.5E-128 T 31-10-2018 DY252_02325 7df6d820ccaa6f2ac46d621f4c6cecf6 360 Gene3D G3DSA:3.40.1570.10 89 344 1.5E-128 T 31-10-2018 DY252_02325 7df6d820ccaa6f2ac46d621f4c6cecf6 360 SUPERFAMILY SSF144064 14 350 1.18E-111 T 31-10-2018 DY252_02040 5e56ef4f214aa4ffc0017d45a2e1a085 320 Gene3D G3DSA:3.40.50.300 7 299 5.0E-65 T 31-10-2018 DY252_02040 5e56ef4f214aa4ffc0017d45a2e1a085 320 Pfam PF00005 ABC transporter 28 170 3.8E-31 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_02040 5e56ef4f214aa4ffc0017d45a2e1a085 320 SMART SM00382 37 233 7.0E-12 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_02040 5e56ef4f214aa4ffc0017d45a2e1a085 320 SUPERFAMILY SSF52540 4 239 1.23E-61 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_02040 5e56ef4f214aa4ffc0017d45a2e1a085 320 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_03290 197853fbbfdfdf5b023166ea1844633a 148 SUPERFAMILY SSF55961 3 147 3.39E-25 T 31-10-2018 DY252_03290 197853fbbfdfdf5b023166ea1844633a 148 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 12 147 4.2E-13 T 31-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like DY252_03290 197853fbbfdfdf5b023166ea1844633a 148 Gene3D G3DSA:3.30.530.20 1 148 9.6E-27 T 31-10-2018 IPR023393 START-like domain superfamily DY252_04325 c9fa93f8325cc220e7d95a250522619e 266 Gene3D G3DSA:1.10.287.70 2 73 2.5E-22 T 31-10-2018 DY252_04325 c9fa93f8325cc220e7d95a250522619e 266 Gene3D G3DSA:1.20.120.80 75 265 7.2E-76 T 31-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04325 c9fa93f8325cc220e7d95a250522619e 266 SUPERFAMILY SSF81452 4 264 3.24E-91 T 31-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_04325 c9fa93f8325cc220e7d95a250522619e 266 Pfam PF00510 Cytochrome c oxidase subunit III 8 264 8.8E-93 T 31-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_06765 7d2316b37611493c291bd54052370971 194 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 29 161 6.8E-21 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_12205 31c00e902a8b8b43cb747bb4a0605f1e 303 Pfam PF00892 EamA-like transporter family 160 290 3.7E-10 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_12205 31c00e902a8b8b43cb747bb4a0605f1e 303 Pfam PF00892 EamA-like transporter family 16 148 1.2E-11 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_12205 31c00e902a8b8b43cb747bb4a0605f1e 303 SUPERFAMILY SSF103481 197 294 1.7E-12 T 31-10-2018 DY252_12205 31c00e902a8b8b43cb747bb4a0605f1e 303 SUPERFAMILY SSF103481 56 151 6.67E-12 T 31-10-2018 DY252_01495 dc28e2cb179213adf878d9a7aa0f926d 211 Pfam PF04186 FxsA cytoplasmic membrane protein 8 110 4.8E-35 T 31-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 DY252_21075 08e1e2678b816f82d0fbf0c50e323116 217 SUPERFAMILY SSF52540 1 207 2.12E-40 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_21075 08e1e2678b816f82d0fbf0c50e323116 217 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 185 1.7E-16 T 31-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DY252_21075 08e1e2678b816f82d0fbf0c50e323116 217 PIRSF PIRSF009320 1 215 8.4E-50 T 31-10-2018 DY252_21075 08e1e2678b816f82d0fbf0c50e323116 217 Gene3D G3DSA:3.40.50.300 1 209 6.9E-50 T 31-10-2018 DY252_17790 cf84a88620c42e6fb2f99ae0df1cc5f3 201 Gene3D G3DSA:1.10.287.130 4 76 1.0E-24 T 31-10-2018 DY252_17790 cf84a88620c42e6fb2f99ae0df1cc5f3 201 Gene3D G3DSA:3.30.565.10 77 200 4.1E-30 T 31-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DY252_17790 cf84a88620c42e6fb2f99ae0df1cc5f3 201 Pfam PF10090 Histidine phosphotransferase C-terminal domain 81 193 3.1E-22 T 31-10-2018 IPR018762 Histidine phosphotransferase ChpT, C-terminal DY252_13030 67ea9eba566c032ebceebf6ced4c8ee5 364 PIRSF PIRSF039026 1 359 9.5E-129 T 31-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like DY252_13030 67ea9eba566c032ebceebf6ced4c8ee5 364 Gene3D G3DSA:3.40.190.170 35 340 2.4E-124 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_13030 67ea9eba566c032ebceebf6ced4c8ee5 364 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 320 2.8E-54 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_13030 67ea9eba566c032ebceebf6ced4c8ee5 364 Gene3D G3DSA:3.40.190.10 154 326 2.4E-124 T 31-10-2018 DY252_21205 2da0ff7a87abadc7496a19bbb1145b4e 162 Pfam PF04002 RadC-like JAB domain 43 159 6.0E-38 T 31-10-2018 IPR025657 RadC-like JAB domain DY252_21205 2da0ff7a87abadc7496a19bbb1145b4e 162 SUPERFAMILY SSF102712 87 129 2.75E-6 T 31-10-2018 DY252_21205 2da0ff7a87abadc7496a19bbb1145b4e 162 Gene3D G3DSA:3.40.140.10 40 161 4.5E-35 T 31-10-2018 DY252_21205 2da0ff7a87abadc7496a19bbb1145b4e 162 TIGRFAM TIGR00608 radc: DNA repair protein RadC 21 160 5.4E-44 T 31-10-2018 IPR001405 Uncharacterised protein family UPF0758 DY252_13460 8e8573186e83f925914237593265a8d3 337 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 11 332 25.906 T 31-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13460 8e8573186e83f925914237593265a8d3 337 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 57 72 - T 31-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13460 8e8573186e83f925914237593265a8d3 337 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 215 228 - T 31-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_13460 8e8573186e83f925914237593265a8d3 337 Pfam PF00146 NADH dehydrogenase 18 325 1.0E-131 T 31-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_12885 d188c3268d8e1f27caeb165a3820a338 157 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 154 84.492 T 31-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 DY252_12885 d188c3268d8e1f27caeb165a3820a338 157 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 7.9E-51 T 31-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 DY252_12885 d188c3268d8e1f27caeb165a3820a338 157 Pfam PF03477 ATP cone domain 50 136 6.1E-18 T 31-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 DY252_19295 985fda54f25c180c2ff8056dbab4af22 506 Gene3D G3DSA:3.30.420.40 242 505 1.2E-60 T 31-10-2018 DY252_19295 985fda54f25c180c2ff8056dbab4af22 506 PIRSF PIRSF000538 2 497 1.8E-95 T 31-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DY252_19295 985fda54f25c180c2ff8056dbab4af22 506 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 31-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DY252_19295 985fda54f25c180c2ff8056dbab4af22 506 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 449 7.3E-25 T 31-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DY252_19295 985fda54f25c180c2ff8056dbab4af22 506 Gene3D G3DSA:3.30.420.40 1 240 3.3E-61 T 31-10-2018 DY252_19295 985fda54f25c180c2ff8056dbab4af22 506 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 249 1.4E-52 T 31-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DY252_19295 985fda54f25c180c2ff8056dbab4af22 506 SUPERFAMILY SSF53067 4 252 9.36E-53 T 31-10-2018 DY252_19295 985fda54f25c180c2ff8056dbab4af22 506 SUPERFAMILY SSF53067 254 490 6.98E-53 T 31-10-2018 DY252_15000 33804c7f44828b45f2ad8c70cb04464b 275 SUPERFAMILY SSF46565 215 270 1.44E-14 T 31-10-2018 IPR036869 Chaperone J-domain superfamily DY252_15000 33804c7f44828b45f2ad8c70cb04464b 275 Pfam PF00226 DnaJ domain 224 253 8.0E-7 T 31-10-2018 IPR001623 DnaJ domain DY252_15000 33804c7f44828b45f2ad8c70cb04464b 275 Gene3D G3DSA:1.10.287.110 209 272 1.9E-20 T 31-10-2018 IPR036869 Chaperone J-domain superfamily DY252_15000 33804c7f44828b45f2ad8c70cb04464b 275 SMART SM00271 220 274 8.8E-8 T 31-10-2018 IPR001623 DnaJ domain DY252_10805 e6f2758444665c58ed18b774d8c10b13 163 Gene3D G3DSA:3.30.230.10 35 163 1.5E-51 T 31-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DY252_10805 e6f2758444665c58ed18b774d8c10b13 163 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 34 163 33.3 T 31-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid DY252_10805 e6f2758444665c58ed18b774d8c10b13 163 ProSitePatterns PS00360 Ribosomal protein S9 signature. 102 120 - T 31-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 DY252_10805 e6f2758444665c58ed18b774d8c10b13 163 SUPERFAMILY SSF54211 38 163 1.1E-47 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_10805 e6f2758444665c58ed18b774d8c10b13 163 Pfam PF00380 Ribosomal protein S9/S16 43 163 3.2E-47 T 31-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 DY252_06510 163739a12121ddead393ef6bfc1caff0 167 SUPERFAMILY SSF89447 2 134 9.72E-33 T 31-10-2018 IPR037914 SpoVT-AbrB domain superfamily DY252_06510 163739a12121ddead393ef6bfc1caff0 167 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 164 31.059 T 31-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DY252_06510 163739a12121ddead393ef6bfc1caff0 167 Pfam PF02381 MraZ protein, putative antitoxin-like 87 132 5.7E-7 T 31-10-2018 IPR020603 MraZ domain DY252_06510 163739a12121ddead393ef6bfc1caff0 167 Pfam PF02381 MraZ protein, putative antitoxin-like 2 33 1.4E-6 T 31-10-2018 IPR020603 MraZ domain DY252_06510 163739a12121ddead393ef6bfc1caff0 167 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 2 132 1.0E-13 T 31-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DY252_06510 163739a12121ddead393ef6bfc1caff0 167 Gene3D G3DSA:2.40.330.20 1 142 9.9E-30 T 31-10-2018 IPR038619 MraZ superfamily DY252_08320 e97f4f501890e20812d254bd3a6f4b42 179 Pfam PF04386 Stringent starvation protein B 12 163 5.4E-40 T 31-10-2018 IPR007481 Stringent starvation protein B DY252_08320 e97f4f501890e20812d254bd3a6f4b42 179 Gene3D G3DSA:2.30.30.220 1 120 2.6E-45 T 31-10-2018 IPR036760 SspB-like superfamily DY252_08320 e97f4f501890e20812d254bd3a6f4b42 179 SUPERFAMILY SSF101738 6 118 5.1E-39 T 31-10-2018 IPR036760 SspB-like superfamily DY252_20955 bb7d6c0969de729ac3d359f1738dd045 93 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 18 84 0.002 T 31-10-2018 DY252_20955 bb7d6c0969de729ac3d359f1738dd045 93 PIRSF PIRSF017854 9 93 1.8E-37 T 31-10-2018 IPR016704 Conjugal transfer, TrbD DY252_20955 bb7d6c0969de729ac3d359f1738dd045 93 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 16 82 7.3E-12 T 31-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB DY252_19755 e49912277c564c2fb260207b24b61063 202 Pfam PF01467 Cytidylyltransferase-like 17 196 9.0E-19 T 31-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DY252_19755 e49912277c564c2fb260207b24b61063 202 Gene3D G3DSA:3.40.50.620 11 201 5.3E-41 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_19755 e49912277c564c2fb260207b24b61063 202 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 13 191 21.141 T 31-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DY252_19755 e49912277c564c2fb260207b24b61063 202 SUPERFAMILY SSF52374 13 196 1.47E-37 T 31-10-2018 DY252_19755 e49912277c564c2fb260207b24b61063 202 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 17 196 1.8E-34 T 31-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DY252_15140 7be3e2f759312631ff123ce01b7c766d 97 Pfam PF11011 Protein of unknown function (DUF2849) 4 90 3.5E-26 T 31-10-2018 IPR021270 Protein of unknown function DUF2849 DY252_05455 a021d4f66e33e8169ed76368d4a2ef7a 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 423 5.1E-92 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_05455 a021d4f66e33e8169ed76368d4a2ef7a 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 418 3.5E-87 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_05455 a021d4f66e33e8169ed76368d4a2ef7a 426 PIRSF PIRSF006066 1 426 3.2E-89 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_00320 431dbc6a579cf60857fd68e3d7a1a4e6 449 SUPERFAMILY SSF51261 153 402 7.32E-59 T 31-10-2018 IPR011055 Duplicated hybrid motif DY252_00320 431dbc6a579cf60857fd68e3d7a1a4e6 449 Gene3D G3DSA:2.70.70.10 276 407 3.6E-75 T 31-10-2018 IPR011055 Duplicated hybrid motif DY252_00320 431dbc6a579cf60857fd68e3d7a1a4e6 449 Pfam PF01551 Peptidase family M23 303 400 6.7E-31 T 31-10-2018 IPR016047 Peptidase M23 DY252_00320 431dbc6a579cf60857fd68e3d7a1a4e6 449 Gene3D G3DSA:3.10.450.350 178 429 3.6E-75 T 31-10-2018 DY252_02560 ca12b1fbada0b32ad4730d91bfad946f 158 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 128 3.6E-28 T 31-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 DY252_02560 ca12b1fbada0b32ad4730d91bfad946f 158 SUPERFAMILY SSF52540 25 126 4.57E-15 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_02560 ca12b1fbada0b32ad4730d91bfad946f 158 Gene3D G3DSA:3.40.50.300 2 151 1.2E-36 T 31-10-2018 DY252_02560 ca12b1fbada0b32ad4730d91bfad946f 158 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 8 128 4.1E-34 T 31-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 DY252_11530 d7cc313000be40c0520e94174dbff4ad 643 SUPERFAMILY SSF53850 94 622 1.79E-77 T 31-10-2018 DY252_11530 d7cc313000be40c0520e94174dbff4ad 643 Gene3D G3DSA:3.10.105.10 354 602 1.7E-40 T 31-10-2018 DY252_11530 d7cc313000be40c0520e94174dbff4ad 643 Gene3D G3DSA:3.40.190.10 86 351 5.2E-39 T 31-10-2018 DY252_11530 d7cc313000be40c0520e94174dbff4ad 643 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 111 522 3.2E-66 T 31-10-2018 IPR000914 Solute-binding protein family 5 domain DY252_09490 d2f66eb7b25c1ddb7764be4db774843d 288 Gene3D G3DSA:3.90.25.10 140 272 1.7E-88 T 31-10-2018 DY252_09490 d2f66eb7b25c1ddb7764be4db774843d 288 Gene3D G3DSA:3.40.50.720 4 271 1.7E-88 T 31-10-2018 DY252_09490 d2f66eb7b25c1ddb7764be4db774843d 288 Pfam PF05368 NmrA-like family 3 224 8.5E-25 T 31-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 DY252_09490 d2f66eb7b25c1ddb7764be4db774843d 288 SUPERFAMILY SSF51735 2 258 1.31E-55 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_06730 aadfbdb382addbfccb85bb3f3f1e012e 142 PIRSF PIRSF006276 1 142 2.0E-19 T 31-10-2018 IPR006015 Universal stress protein A DY252_06730 aadfbdb382addbfccb85bb3f3f1e012e 142 Pfam PF00582 Universal stress protein family 1 141 3.8E-31 T 31-10-2018 IPR006016 UspA DY252_06730 aadfbdb382addbfccb85bb3f3f1e012e 142 SUPERFAMILY SSF52402 1 141 3.94E-32 T 31-10-2018 DY252_06730 aadfbdb382addbfccb85bb3f3f1e012e 142 PRINTS PR01438 Universal stress protein signature 2 20 7.3E-11 T 31-10-2018 IPR006015 Universal stress protein A DY252_06730 aadfbdb382addbfccb85bb3f3f1e012e 142 PRINTS PR01438 Universal stress protein signature 119 141 7.3E-11 T 31-10-2018 IPR006015 Universal stress protein A DY252_06730 aadfbdb382addbfccb85bb3f3f1e012e 142 PRINTS PR01438 Universal stress protein signature 102 114 7.3E-11 T 31-10-2018 IPR006015 Universal stress protein A DY252_06730 aadfbdb382addbfccb85bb3f3f1e012e 142 Gene3D G3DSA:3.40.50.620 1 141 1.7E-33 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_11745 d50d2e42288a90c9b09a539c5ece185a 198 SUPERFAMILY SSF159594 33 197 1.33E-29 T 31-10-2018 DY252_11745 d50d2e42288a90c9b09a539c5ece185a 198 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 35 194 9.2E-39 T 31-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component DY252_11745 d50d2e42288a90c9b09a539c5ece185a 198 Gene3D G3DSA:3.40.50.10610 25 196 4.6E-13 T 31-10-2018 DY252_05750 b00ee891bb48f12ba913b8aa3126c89a 152 Pfam PF05926 Phage head completion protein (GPL) 17 152 1.2E-30 T 31-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 DY252_14080 63481224c0b306d6264466d82a528960 97 Pfam PF05957 Bacterial protein of unknown function (DUF883) 13 96 7.0E-11 T 31-10-2018 IPR010279 Inner membrane protein YqjD/ElaB GO:0043022 DY252_10625 e747a25fe9c79943a909396a8e43fb7c 148 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 128 3.5E-30 T 31-10-2018 IPR000944 Transcription regulator Rrf2-type DY252_10625 e747a25fe9c79943a909396a8e43fb7c 148 Pfam PF02082 Transcriptional regulator 2 82 1.9E-22 T 31-10-2018 IPR000944 Transcription regulator Rrf2-type DY252_10625 e747a25fe9c79943a909396a8e43fb7c 148 Gene3D G3DSA:1.10.10.10 1 140 3.2E-26 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_10625 e747a25fe9c79943a909396a8e43fb7c 148 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 31-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site DY252_10625 e747a25fe9c79943a909396a8e43fb7c 148 SUPERFAMILY SSF46785 5 129 1.65E-25 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_09575 71ae97d6aa7425de559235a1638985c3 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 255 8.0E-61 T 31-10-2018 DY252_09575 71ae97d6aa7425de559235a1638985c3 262 SUPERFAMILY SSF51735 10 256 9.79E-73 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_09575 71ae97d6aa7425de559235a1638985c3 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_09575 71ae97d6aa7425de559235a1638985c3 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 9.7E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09575 71ae97d6aa7425de559235a1638985c3 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 9.7E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09575 71ae97d6aa7425de559235a1638985c3 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 9.7E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09575 71ae97d6aa7425de559235a1638985c3 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 9.7E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09575 71ae97d6aa7425de559235a1638985c3 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 9.7E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09575 71ae97d6aa7425de559235a1638985c3 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 9.7E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09575 71ae97d6aa7425de559235a1638985c3 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 5.1E-13 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09575 71ae97d6aa7425de559235a1638985c3 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 5.1E-13 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09575 71ae97d6aa7425de559235a1638985c3 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 5.1E-13 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09575 71ae97d6aa7425de559235a1638985c3 262 Gene3D G3DSA:3.40.50.720 3 260 3.6E-73 T 31-10-2018 DY252_20230 5c3ead063b517643f4232b6742d9ea82 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 127 195 8.2E-6 T 31-10-2018 IPR004046 Glutathione S-transferase, C-terminal DY252_20230 5c3ead063b517643f4232b6742d9ea82 212 SUPERFAMILY SSF47616 81 202 2.27E-19 T 31-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DY252_20230 5c3ead063b517643f4232b6742d9ea82 212 Gene3D G3DSA:1.20.1050.10 83 195 1.2E-50 T 31-10-2018 DY252_20230 5c3ead063b517643f4232b6742d9ea82 212 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 80 9.6E-12 T 31-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DY252_20230 5c3ead063b517643f4232b6742d9ea82 212 Gene3D G3DSA:3.40.30.10 5 197 1.2E-50 T 31-10-2018 DY252_20230 5c3ead063b517643f4232b6742d9ea82 212 SUPERFAMILY SSF52833 2 84 3.22E-20 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_05715 ffd0529e4f7af8a8432d6a3768a0c383 154 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 17 150 1.4E-25 T 31-10-2018 IPR006522 Phage virion morphogensis protein DY252_05715 ffd0529e4f7af8a8432d6a3768a0c383 154 Pfam PF05069 Phage virion morphogenesis family 10 149 3.4E-30 T 31-10-2018 IPR006522 Phage virion morphogensis protein DY252_02120 b49b89da61fe4938c967d8ce29a9476f 157 SUPERFAMILY SSF52172 35 156 7.83E-28 T 31-10-2018 IPR011006 CheY-like superfamily DY252_02120 b49b89da61fe4938c967d8ce29a9476f 157 SMART SM00448 35 156 7.3E-24 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_02120 b49b89da61fe4938c967d8ce29a9476f 157 Pfam PF00072 Response regulator receiver domain 38 156 1.6E-22 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_02120 b49b89da61fe4938c967d8ce29a9476f 157 Gene3D G3DSA:3.40.50.2300 21 157 2.6E-30 T 31-10-2018 DY252_21140 c250e3ff0154c3e233dd8bf58236813b 308 Pfam PF10686 Protein of unknown function (DUF2493) 192 257 4.0E-27 T 31-10-2018 IPR019627 Mycobacteriophage D29, Gp61 DY252_22065 bb91e14cc3addf501a1d6493d9589a10 235 Pfam PF02631 RecX family 94 221 3.4E-17 T 31-10-2018 IPR003783 Regulatory protein RecX GO:0006282 DY252_22065 bb91e14cc3addf501a1d6493d9589a10 235 Gene3D G3DSA:1.10.10.10 111 153 6.0E-5 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_02925 4f43a1aff1b22599ef998248466c64dc 316 Pfam PF00892 EamA-like transporter family 156 283 5.1E-7 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_02925 4f43a1aff1b22599ef998248466c64dc 316 Pfam PF00892 EamA-like transporter family 16 144 2.5E-18 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_02925 4f43a1aff1b22599ef998248466c64dc 316 SUPERFAMILY SSF103481 187 286 1.44E-10 T 31-10-2018 DY252_02925 4f43a1aff1b22599ef998248466c64dc 316 SUPERFAMILY SSF103481 47 148 6.41E-18 T 31-10-2018 DY252_05500 fd11f5b306622c1b387796b9ce76bd38 310 SUPERFAMILY SSF46785 1 111 3.44E-25 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_05500 fd11f5b306622c1b387796b9ce76bd38 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.4E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_05500 fd11f5b306622c1b387796b9ce76bd38 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.4E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_05500 fd11f5b306622c1b387796b9ce76bd38 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.4E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_05500 fd11f5b306622c1b387796b9ce76bd38 310 Pfam PF03466 LysR substrate binding domain 87 290 5.3E-41 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_05500 fd11f5b306622c1b387796b9ce76bd38 310 Gene3D G3DSA:3.40.190.290 90 291 8.1E-53 T 31-10-2018 DY252_05500 fd11f5b306622c1b387796b9ce76bd38 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.7E-23 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_05500 fd11f5b306622c1b387796b9ce76bd38 310 SUPERFAMILY SSF53850 89 294 4.81E-44 T 31-10-2018 DY252_05500 fd11f5b306622c1b387796b9ce76bd38 310 Gene3D G3DSA:1.10.10.10 1 85 6.3E-27 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_06320 5ccbd35a3b545be50883915f6022dfeb 357 Gene3D G3DSA:3.20.20.330 7 344 9.7E-127 T 31-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DY252_06320 5ccbd35a3b545be50883915f6022dfeb 357 SUPERFAMILY SSF82282 13 356 2.22E-101 T 31-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DY252_06320 5ccbd35a3b545be50883915f6022dfeb 357 Pfam PF02574 Homocysteine S-methyltransferase 23 331 3.1E-80 T 31-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DY252_06320 5ccbd35a3b545be50883915f6022dfeb 357 PIRSF PIRSF037505 62 154 0.024 T 31-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 DY252_06320 5ccbd35a3b545be50883915f6022dfeb 357 PIRSF PIRSF037505 277 352 0.004 T 31-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 DY252_21145 ad77cb6709b9f4964364f9705ba55771 344 Pfam PF13362 Toprim domain 235 323 5.1E-20 T 31-10-2018 IPR006171 TOPRIM domain DY252_02290 9754f9724c4c44a84f8087635e97aecf 98 Pfam PF02036 SCP-2 sterol transfer family 3 97 3.2E-20 T 31-10-2018 IPR003033 SCP2 sterol-binding domain DY252_02290 9754f9724c4c44a84f8087635e97aecf 98 SUPERFAMILY SSF55718 6 98 2.59E-20 T 31-10-2018 IPR036527 SCP2 sterol-binding domain superfamily DY252_02290 9754f9724c4c44a84f8087635e97aecf 98 Gene3D G3DSA:3.30.1050.10 1 98 1.8E-21 T 31-10-2018 IPR036527 SCP2 sterol-binding domain superfamily DY252_02760 9e2b85a994950bc60e014d5465cb234e 288 Gene3D G3DSA:2.60.120.10 14 266 2.4E-66 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_02760 9e2b85a994950bc60e014d5465cb234e 288 PIRSF PIRSF006232 1 279 1.4E-80 T 31-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 DY252_02760 9e2b85a994950bc60e014d5465cb234e 288 Pfam PF05726 Pirin C-terminal cupin domain 173 270 1.2E-20 T 31-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 DY252_02760 9e2b85a994950bc60e014d5465cb234e 288 SUPERFAMILY SSF51182 8 280 1.66E-73 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_02760 9e2b85a994950bc60e014d5465cb234e 288 Gene3D G3DSA:2.60.120.10 142 241 2.4E-66 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_02760 9e2b85a994950bc60e014d5465cb234e 288 Pfam PF02678 Pirin 16 120 1.3E-32 T 31-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 DY252_16485 766a539709ccca8b5f45c2c35e318ca6 78 Pfam PF07205 Domain of unknown function (DUF1413) 18 71 8.3E-8 T 31-10-2018 IPR010813 Protein of unknown function DUF1413 DY252_06660 4622a71804526b6632b66521936a8a7a 181 Pfam PF02592 Putative vitamin uptake transporter 35 166 6.0E-23 T 31-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 DY252_06660 4622a71804526b6632b66521936a8a7a 181 Hamap MF_02088 Probable queuosine precursor transporter. 1 178 14.409 T 31-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 DY252_02755 4ce75c325a8ca18165bddc5e4512af83 346 SUPERFAMILY SSF51430 1 346 3.14E-107 T 31-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DY252_02755 4ce75c325a8ca18165bddc5e4512af83 346 Gene3D G3DSA:3.20.20.100 1 346 3.2E-128 T 31-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DY252_02755 4ce75c325a8ca18165bddc5e4512af83 346 PRINTS PR00069 Aldo-keto reductase signature 115 133 7.6E-9 T 31-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DY252_02755 4ce75c325a8ca18165bddc5e4512af83 346 PRINTS PR00069 Aldo-keto reductase signature 163 180 7.6E-9 T 31-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DY252_02755 4ce75c325a8ca18165bddc5e4512af83 346 Pfam PF00248 Aldo/keto reductase family 16 337 5.2E-71 T 31-10-2018 IPR023210 NADP-dependent oxidoreductase domain DY252_16470 56e9f16d8e5329b7fc809954f5f6e6b2 370 SUPERFAMILY SSF51395 4 355 4.28E-89 T 31-10-2018 DY252_16470 56e9f16d8e5329b7fc809954f5f6e6b2 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 356 1.1E-62 T 31-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DY252_16470 56e9f16d8e5329b7fc809954f5f6e6b2 370 Gene3D G3DSA:3.20.20.70 6 365 9.0E-99 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_13450 c73960fa17ed764cc7c0c14b32dcda09 202 Gene3D G3DSA:1.20.120.1200 4 168 1.2E-42 T 31-10-2018 DY252_13450 c73960fa17ed764cc7c0c14b32dcda09 202 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 166 3.2E-37 T 31-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DY252_08825 08cdf05233484115be36ad0899b1b997 184 Pfam PF13560 Helix-turn-helix domain 7 63 5.1E-14 T 31-10-2018 DY252_08825 08cdf05233484115be36ad0899b1b997 184 Gene3D G3DSA:2.60.120.10 94 183 5.1E-7 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_08825 08cdf05233484115be36ad0899b1b997 184 SUPERFAMILY SSF51182 59 182 1.14E-14 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_08825 08cdf05233484115be36ad0899b1b997 184 Gene3D G3DSA:1.10.260.40 2 73 1.1E-19 T 31-10-2018 DY252_08825 08cdf05233484115be36ad0899b1b997 184 SMART SM00530 11 66 5.0E-15 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_08825 08cdf05233484115be36ad0899b1b997 184 SUPERFAMILY SSF47413 3 73 1.6E-17 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_16425 9f1d9daf21f1ad30262d2bd35b64bf9a 312 Pfam PF03466 LysR substrate binding domain 94 297 2.1E-39 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_16425 9f1d9daf21f1ad30262d2bd35b64bf9a 312 SUPERFAMILY SSF46785 8 92 1.52E-22 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_16425 9f1d9daf21f1ad30262d2bd35b64bf9a 312 Gene3D G3DSA:3.40.190.290 97 299 7.4E-52 T 31-10-2018 DY252_16425 9f1d9daf21f1ad30262d2bd35b64bf9a 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 1.3E-20 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_16425 9f1d9daf21f1ad30262d2bd35b64bf9a 312 SUPERFAMILY SSF53850 93 300 2.64E-42 T 31-10-2018 DY252_16425 9f1d9daf21f1ad30262d2bd35b64bf9a 312 Gene3D G3DSA:1.10.10.10 8 94 5.3E-25 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_04855 8f96f0c86e70e5a3bd55c1aad5b75eb9 443 Pfam PF05193 Peptidase M16 inactive domain 195 368 3.1E-26 T 31-10-2018 IPR007863 Peptidase M16, C-terminal DY252_04855 8f96f0c86e70e5a3bd55c1aad5b75eb9 443 Gene3D G3DSA:3.30.830.10 248 438 1.6E-49 T 31-10-2018 DY252_04855 8f96f0c86e70e5a3bd55c1aad5b75eb9 443 SUPERFAMILY SSF63411 28 234 1.67E-43 T 31-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DY252_04855 8f96f0c86e70e5a3bd55c1aad5b75eb9 443 Gene3D G3DSA:3.30.830.10 35 241 3.2E-38 T 31-10-2018 DY252_04855 8f96f0c86e70e5a3bd55c1aad5b75eb9 443 SUPERFAMILY SSF63411 257 437 8.5E-44 T 31-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DY252_09675 3b902874246b6a731e8cd302286745bb 232 Pfam PF12261 Thermostable hemolysin 39 201 7.8E-48 T 31-10-2018 IPR022050 Thermostable hemolysin DY252_07935 120345930d7c39185f5d512c3b344fc3 574 Pfam PF07690 Major Facilitator Superfamily 240 462 8.1E-12 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_07935 120345930d7c39185f5d512c3b344fc3 574 Pfam PF07690 Major Facilitator Superfamily 36 180 2.8E-12 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_07935 120345930d7c39185f5d512c3b344fc3 574 SUPERFAMILY SSF103473 18 561 3.27E-34 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_14600 86ccdc2d0386f631c447609c13497cad 279 Gene3D G3DSA:3.40.50.720 8 253 3.3E-52 T 31-10-2018 DY252_14600 86ccdc2d0386f631c447609c13497cad 279 Gene3D G3DSA:3.90.25.10 122 255 3.3E-52 T 31-10-2018 DY252_14600 86ccdc2d0386f631c447609c13497cad 279 Pfam PF13460 NAD(P)H-binding 11 170 2.3E-11 T 31-10-2018 IPR016040 NAD(P)-binding domain DY252_14600 86ccdc2d0386f631c447609c13497cad 279 SUPERFAMILY SSF51735 4 232 1.05E-40 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_16985 3bd69643951756f9457d07802c7a21a2 263 SUPERFAMILY SSF88697 123 238 1.74E-19 T 31-10-2018 IPR015947 PUA-like superfamily DY252_16985 3bd69643951756f9457d07802c7a21a2 263 SUPERFAMILY SSF47413 19 83 7.24E-13 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_16985 3bd69643951756f9457d07802c7a21a2 263 Gene3D G3DSA:1.10.260.40 7 80 7.9E-12 T 31-10-2018 DY252_16985 3bd69643951756f9457d07802c7a21a2 263 Pfam PF12844 Helix-turn-helix domain 24 74 3.5E-9 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_16985 3bd69643951756f9457d07802c7a21a2 263 SMART SM00530 26 80 2.6E-8 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_05545 37af0b615c244e47ff0b301ac49f84f1 151 SUPERFAMILY SSF89095 2 150 2.14E-37 T 31-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 DY252_05545 37af0b615c244e47ff0b301ac49f84f1 151 Gene3D G3DSA:1.10.1510.10 1 94 5.5E-25 T 31-10-2018 DY252_05545 37af0b615c244e47ff0b301ac49f84f1 151 Pfam PF09424 Yqey-like protein 4 150 5.4E-45 T 31-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 DY252_05545 37af0b615c244e47ff0b301ac49f84f1 151 Gene3D G3DSA:1.10.10.410 95 150 5.1E-12 T 31-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal DY252_08570 97df27269188a897ec4572cc28196901 138 Pfam PF01124 MAPEG family 7 135 5.1E-19 T 31-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein DY252_08570 97df27269188a897ec4572cc28196901 138 Gene3D G3DSA:1.20.120.550 3 137 2.4E-23 T 31-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily DY252_08570 97df27269188a897ec4572cc28196901 138 SUPERFAMILY SSF161084 11 132 6.93E-22 T 31-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily DY252_11670 cf33c05cfcc968e3f3c5431465b134ba 371 Gene3D G3DSA:3.40.190.10 33 349 1.8E-101 T 31-10-2018 DY252_11670 cf33c05cfcc968e3f3c5431465b134ba 371 Pfam PF13416 Bacterial extracellular solute-binding protein 47 319 3.3E-37 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_11670 cf33c05cfcc968e3f3c5431465b134ba 371 Gene3D G3DSA:3.40.190.10 142 356 1.8E-101 T 31-10-2018 DY252_11670 cf33c05cfcc968e3f3c5431465b134ba 371 SUPERFAMILY SSF53850 31 369 1.86E-40 T 31-10-2018 DY252_11205 2c02e7c27925f055d08035e9f4c1e9ab 409 SUPERFAMILY SSF102114 115 318 3.53E-11 T 31-10-2018 DY252_11205 2c02e7c27925f055d08035e9f4c1e9ab 409 Gene3D G3DSA:3.20.20.70 121 366 1.2E-8 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_11205 2c02e7c27925f055d08035e9f4c1e9ab 409 Pfam PF04055 Radical SAM superfamily 123 300 5.9E-12 T 31-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DY252_11205 2c02e7c27925f055d08035e9f4c1e9ab 409 SMART SM00729 119 344 0.0046 T 31-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DY252_07630 44de9baf536ad801b67b5ccb30816df1 222 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 97 190 1.7E-22 T 31-10-2018 IPR018754 Protein of unknown function DUF2285 DY252_11170 3ce68443cdc18255a6129cf20c1fdd38 228 Pfam PF00583 Acetyltransferase (GNAT) family 50 165 3.8E-9 T 31-10-2018 IPR000182 GNAT domain DY252_11170 3ce68443cdc18255a6129cf20c1fdd38 228 Gene3D G3DSA:3.40.630.30 44 184 3.8E-18 T 31-10-2018 DY252_11170 3ce68443cdc18255a6129cf20c1fdd38 228 SUPERFAMILY SSF55729 36 175 1.74E-21 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_16395 fdf381bd27e72aaf3c1f283e46f2b1f0 195 Pfam PF04955 HupE / UreJ protein 13 192 9.2E-56 T 31-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein DY252_16395 fdf381bd27e72aaf3c1f283e46f2b1f0 195 PIRSF PIRSF016919 1 195 9.9E-57 T 31-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein DY252_08785 ea8df24909d5123e521ecb9f9bf5ecfe 271 SUPERFAMILY SSF53850 26 232 6.73E-13 T 31-10-2018 DY252_08785 ea8df24909d5123e521ecb9f9bf5ecfe 271 Gene3D G3DSA:3.40.190.10 94 192 2.8E-5 T 31-10-2018 DY252_08785 ea8df24909d5123e521ecb9f9bf5ecfe 271 Gene3D G3DSA:3.40.190.10 46 226 2.8E-5 T 31-10-2018 DY252_09680 9b10404b1c6c523268d058e01f3f7397 446 SUPERFAMILY SSF82689 331 428 6.41E-26 T 31-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DY252_09680 9b10404b1c6c523268d058e01f3f7397 446 SUPERFAMILY SSF82861 174 258 7.72E-15 T 31-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DY252_09680 9b10404b1c6c523268d058e01f3f7397 446 Gene3D G3DSA:3.30.70.100 328 421 4.2E-21 T 31-10-2018 DY252_09680 9b10404b1c6c523268d058e01f3f7397 446 SUPERFAMILY SSF50182 260 325 2.78E-15 T 31-10-2018 IPR010920 LSM domain superfamily DY252_09680 9b10404b1c6c523268d058e01f3f7397 446 Pfam PF00924 Mechanosensitive ion channel 217 417 5.2E-51 T 31-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DY252_09680 9b10404b1c6c523268d058e01f3f7397 446 Gene3D G3DSA:2.30.30.60 276 324 9.0E-8 T 31-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DY252_10890 5f060274f1fc2dbedc582ffb4b4d2173 600 Gene3D G3DSA:3.40.50.1820 238 520 2.1E-9 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_10890 5f060274f1fc2dbedc582ffb4b4d2173 600 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 66 597 1.1E-242 T 31-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 DY252_10890 5f060274f1fc2dbedc582ffb4b4d2173 600 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 110 281 7.2E-79 T 31-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 DY252_10890 5f060274f1fc2dbedc582ffb4b4d2173 600 SUPERFAMILY SSF53474 239 533 7.2E-44 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_17950 47d1e561881ced36fbb8c0324d101eb0 461 SUPERFAMILY SSF51569 3 446 1.03E-207 T 31-10-2018 DY252_17950 47d1e561881ced36fbb8c0324d101eb0 461 Gene3D G3DSA:3.20.20.70 195 447 1.2E-107 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_17950 47d1e561881ced36fbb8c0324d101eb0 461 Gene3D G3DSA:3.20.20.70 38 194 7.3E-52 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_17950 47d1e561881ced36fbb8c0324d101eb0 461 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 5 448 7.6E-227 T 31-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DY252_17950 47d1e561881ced36fbb8c0324d101eb0 461 Pfam PF01474 Class-II DAHP synthetase family 5 442 2.9E-211 T 31-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DY252_17045 8ea50742b7b95d7654177dd1e21b25b7 223 Gene3D G3DSA:1.20.120.1630 5 170 1.7E-22 T 31-10-2018 DY252_17045 8ea50742b7b95d7654177dd1e21b25b7 223 Pfam PF04191 Phospholipid methyltransferase 69 155 2.7E-12 T 31-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 DY252_13295 5a3caacb45e558c147e536fa5ac36f5d 328 Gene3D G3DSA:1.10.10.10 23 110 3.5E-22 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_13295 5a3caacb45e558c147e536fa5ac36f5d 328 Pfam PF03466 LysR substrate binding domain 108 317 4.7E-25 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_13295 5a3caacb45e558c147e536fa5ac36f5d 328 SUPERFAMILY SSF53850 108 318 9.95E-27 T 31-10-2018 DY252_13295 5a3caacb45e558c147e536fa5ac36f5d 328 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 6.9E-21 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_13295 5a3caacb45e558c147e536fa5ac36f5d 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.0E-9 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_13295 5a3caacb45e558c147e536fa5ac36f5d 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.0E-9 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_13295 5a3caacb45e558c147e536fa5ac36f5d 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.0E-9 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_13295 5a3caacb45e558c147e536fa5ac36f5d 328 SUPERFAMILY SSF46785 20 103 1.12E-21 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_13295 5a3caacb45e558c147e536fa5ac36f5d 328 Gene3D G3DSA:3.40.190.10 120 313 1.3E-31 T 31-10-2018 DY252_13295 5a3caacb45e558c147e536fa5ac36f5d 328 Gene3D G3DSA:3.40.190.10 180 286 1.3E-31 T 31-10-2018 DY252_04695 d9a2aafa27abb0381f0ac096d0326f54 396 Gene3D G3DSA:1.10.540.10 2 134 2.1E-43 T 31-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DY252_04695 d9a2aafa27abb0381f0ac096d0326f54 396 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 132 7.5E-35 T 31-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DY252_04695 d9a2aafa27abb0381f0ac096d0326f54 396 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 246 385 3.7E-28 T 31-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DY252_04695 d9a2aafa27abb0381f0ac096d0326f54 396 SUPERFAMILY SSF47203 244 390 2.42E-40 T 31-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DY252_04695 d9a2aafa27abb0381f0ac096d0326f54 396 SUPERFAMILY SSF56645 7 238 1.83E-80 T 31-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DY252_04695 d9a2aafa27abb0381f0ac096d0326f54 396 Gene3D G3DSA:1.20.140.10 242 396 1.3E-39 T 31-10-2018 DY252_04695 d9a2aafa27abb0381f0ac096d0326f54 396 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 227 1.9E-20 T 31-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DY252_04695 d9a2aafa27abb0381f0ac096d0326f54 396 Gene3D G3DSA:2.40.110.10 135 239 1.8E-38 T 31-10-2018 DY252_04695 d9a2aafa27abb0381f0ac096d0326f54 396 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 345 364 - T 31-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DY252_10315 2f1b206885e4d90854702ec57cbcf0fa 132 SUPERFAMILY SSF88723 1 131 9.25E-38 T 31-10-2018 IPR029060 PIN-like domain superfamily DY252_10315 2f1b206885e4d90854702ec57cbcf0fa 132 Pfam PF01850 PIN domain 5 125 8.7E-19 T 31-10-2018 IPR002716 PIN domain DY252_10315 2f1b206885e4d90854702ec57cbcf0fa 132 Gene3D G3DSA:3.40.50.1010 1 132 5.1E-42 T 31-10-2018 DY252_10315 2f1b206885e4d90854702ec57cbcf0fa 132 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 130 11.637 T 31-10-2018 IPR022907 VapC family GO:0004540 DY252_14845 a756fcccbbdbb24ac88897d8bc4bd008 201 Gene3D G3DSA:3.40.140.10 22 189 1.7E-16 T 31-10-2018 DY252_14845 a756fcccbbdbb24ac88897d8bc4bd008 201 Pfam PF14437 MafB19-like deaminase 44 130 8.8E-8 T 31-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 DY252_14845 a756fcccbbdbb24ac88897d8bc4bd008 201 SUPERFAMILY SSF53927 27 145 6.22E-21 T 31-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DY252_00615 736531a9696825eb6260499400213cba 267 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 2.8E-44 T 31-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DY252_03070 ad2b766981f25651ff88ccb28513df91 458 SUPERFAMILY SSF52540 42 183 6.35E-11 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_03070 ad2b766981f25651ff88ccb28513df91 458 SUPERFAMILY SSF46785 256 304 1.54E-5 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_03070 ad2b766981f25651ff88ccb28513df91 458 Pfam PF13173 AAA domain 54 181 6.1E-16 T 31-10-2018 DY252_03070 ad2b766981f25651ff88ccb28513df91 458 Gene3D G3DSA:3.40.50.300 36 171 6.7E-6 T 31-10-2018 DY252_18040 8b690e8c6ef614a17392823847b961e9 490 SUPERFAMILY SSF48452 71 151 1.29E-10 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_18040 8b690e8c6ef614a17392823847b961e9 490 Pfam PF14559 Tetratricopeptide repeat 92 145 1.9E-5 T 31-10-2018 DY252_18040 8b690e8c6ef614a17392823847b961e9 490 Gene3D G3DSA:1.25.40.10 36 176 5.6E-10 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_09865 a3dfcfc518e0098ed5bcd56270bceb82 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.7E-19 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_09865 a3dfcfc518e0098ed5bcd56270bceb82 302 Gene3D G3DSA:3.40.190.10 161 260 1.4E-56 T 31-10-2018 DY252_09865 a3dfcfc518e0098ed5bcd56270bceb82 302 Pfam PF03466 LysR substrate binding domain 90 289 5.0E-35 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_09865 a3dfcfc518e0098ed5bcd56270bceb82 302 Gene3D G3DSA:3.40.190.10 101 286 1.4E-56 T 31-10-2018 DY252_09865 a3dfcfc518e0098ed5bcd56270bceb82 302 SUPERFAMILY SSF53850 90 292 8.87E-38 T 31-10-2018 DY252_09865 a3dfcfc518e0098ed5bcd56270bceb82 302 SUPERFAMILY SSF46785 2 86 7.5E-22 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_09865 a3dfcfc518e0098ed5bcd56270bceb82 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.3E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_09865 a3dfcfc518e0098ed5bcd56270bceb82 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.3E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_09865 a3dfcfc518e0098ed5bcd56270bceb82 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.3E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_09865 a3dfcfc518e0098ed5bcd56270bceb82 302 Gene3D G3DSA:1.10.10.10 5 93 2.8E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_00760 8d0c2c992783c591720c21b68c8a5167 154 Pfam PF03692 Putative zinc- or iron-chelating domain 32 100 4.0E-6 T 31-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein DY252_00760 8d0c2c992783c591720c21b68c8a5167 154 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 10 154 40.047 T 31-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 DY252_00760 8d0c2c992783c591720c21b68c8a5167 154 PIRSF PIRSF006173 7 154 2.5E-63 T 31-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 DY252_14350 bf8165691898b2ddfa5ca3b911e5f6fb 126 SUPERFAMILY SSF47413 63 119 3.64E-5 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_09440 b203810012d2998c1b4914bfd4ecf72b 364 Pfam PF01594 AI-2E family transporter 11 336 3.8E-63 T 31-10-2018 IPR002549 Transmembrane protein TqsA-like DY252_06420 2e207786176bb2e530902aa6a919d33e 556 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 554 4.2E-146 T 31-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 DY252_06420 2e207786176bb2e530902aa6a919d33e 556 SUPERFAMILY SSF52540 1 218 5.53E-62 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_06420 2e207786176bb2e530902aa6a919d33e 556 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 509 2.9E-16 T 31-10-2018 IPR003395 RecF/RecN/SMC, N-terminal DY252_06420 2e207786176bb2e530902aa6a919d33e 556 PIRSF PIRSF003128 1 556 1.6E-157 T 31-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 DY252_06420 2e207786176bb2e530902aa6a919d33e 556 Gene3D G3DSA:3.40.50.300 293 554 8.2E-53 T 31-10-2018 DY252_06420 2e207786176bb2e530902aa6a919d33e 556 Gene3D G3DSA:3.40.50.300 1 247 8.5E-48 T 31-10-2018 DY252_06420 2e207786176bb2e530902aa6a919d33e 556 SUPERFAMILY SSF52540 3 501 1.27E-25 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_10410 e22865964c1fe84f9ebab58ddcc5c73c 189 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 136 171 7.6E-11 T 31-10-2018 IPR001451 Hexapeptide repeat DY252_10410 e22865964c1fe84f9ebab58ddcc5c73c 189 SMART SM01266 11 65 1.3E-10 T 31-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 DY252_10410 e22865964c1fe84f9ebab58ddcc5c73c 189 SUPERFAMILY SSF51161 11 187 9.56E-51 T 31-10-2018 IPR011004 Trimeric LpxA-like superfamily DY252_10410 e22865964c1fe84f9ebab58ddcc5c73c 189 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 145 173 - T 31-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DY252_10410 e22865964c1fe84f9ebab58ddcc5c73c 189 Gene3D G3DSA:2.160.10.10 6 189 8.6E-60 T 31-10-2018 DY252_10410 e22865964c1fe84f9ebab58ddcc5c73c 189 Pfam PF12464 Maltose acetyltransferase 13 63 9.8E-8 T 31-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 DY252_18965 ff1cb86a0d2bf4fd63b01b059d5454b2 339 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 83 335 1.4E-43 T 31-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DY252_18965 ff1cb86a0d2bf4fd63b01b059d5454b2 339 Gene3D G3DSA:3.90.850.10 1 339 6.5E-145 T 31-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DY252_18965 ff1cb86a0d2bf4fd63b01b059d5454b2 339 SUPERFAMILY SSF56529 78 336 1.44E-58 T 31-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DY252_15335 c424af3f225a72e6bebd528012bec9e9 114 Pfam PF00034 Cytochrome c 3 86 2.3E-6 T 31-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_15335 c424af3f225a72e6bebd528012bec9e9 114 Gene3D G3DSA:1.10.760.10 1 109 4.9E-11 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_15335 c424af3f225a72e6bebd528012bec9e9 114 SUPERFAMILY SSF46626 2 85 1.76E-10 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_09400 5f32308ec6a3615cbbb00dffc8ab5269 61 Pfam PF07835 Bacterial aa3 type cytochrome c oxidase subunit IV 28 59 2.6E-4 T 31-10-2018 IPR012422 Cytochrome c oxidase, subunit IV, bacterial aa3 type KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 DY252_20690 71a6c4d828bf666824d3df11ce6fdc94 349 Gene3D G3DSA:3.40.50.880 12 213 5.9E-44 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_20690 71a6c4d828bf666824d3df11ce6fdc94 349 SMART SM00342 243 326 6.4E-21 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_20690 71a6c4d828bf666824d3df11ce6fdc94 349 Pfam PF01965 DJ-1/PfpI family 52 179 8.3E-12 T 31-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DY252_20690 71a6c4d828bf666824d3df11ce6fdc94 349 SUPERFAMILY SSF46689 226 273 2.06E-5 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_20690 71a6c4d828bf666824d3df11ce6fdc94 349 Gene3D G3DSA:1.10.10.60 222 329 5.2E-29 T 31-10-2018 DY252_20690 71a6c4d828bf666824d3df11ce6fdc94 349 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 280 322 - T 31-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DY252_20690 71a6c4d828bf666824d3df11ce6fdc94 349 SUPERFAMILY SSF46689 279 328 6.72E-13 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_20690 71a6c4d828bf666824d3df11ce6fdc94 349 Pfam PF12833 Helix-turn-helix domain 249 327 3.1E-21 T 31-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DY252_20690 71a6c4d828bf666824d3df11ce6fdc94 349 SUPERFAMILY SSF52317 16 206 2.01E-39 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_10775 7a568462a592ea25f201bd0da0fcf0e0 209 Pfam PF01810 LysE type translocator 15 201 4.8E-34 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_10775 7a568462a592ea25f201bd0da0fcf0e0 209 PIRSF PIRSF006324 1 206 4.6E-60 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_17910 414127b0b9c7e965dc6f3427e8904e4e 130 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 121 3.0E-14 T 31-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DY252_17910 414127b0b9c7e965dc6f3427e8904e4e 130 SUPERFAMILY SSF69118 26 128 3.29E-27 T 31-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DY252_17910 414127b0b9c7e965dc6f3427e8904e4e 130 Gene3D G3DSA:1.20.1290.10 6 130 2.1E-28 T 31-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DY252_21370 4c2556963db5957dcc36cb0c5b3faae1 141 Pfam PF11171 Protein of unknown function (DUF2958) 3 118 6.8E-40 T 31-10-2018 IPR021341 Protein of unknown function DUF2958 DY252_08575 0f9a11fb5661e759bd19a1a9e2a9bbcb 69 SMART SM00530 6 62 3.2E-5 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_08575 0f9a11fb5661e759bd19a1a9e2a9bbcb 69 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 68 1.7E-24 T 31-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DY252_08575 0f9a11fb5661e759bd19a1a9e2a9bbcb 69 SUPERFAMILY SSF47413 1 68 3.1E-18 T 31-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DY252_08575 0f9a11fb5661e759bd19a1a9e2a9bbcb 69 Gene3D G3DSA:1.10.260.40 6 67 5.4E-10 T 31-10-2018 DY252_05855 407eb32e1b80f4e6fa9975acd1b137a8 278 Gene3D G3DSA:1.10.3720.10 1 265 3.3E-59 T 31-10-2018 IPR035906 MetI-like superfamily DY252_05855 407eb32e1b80f4e6fa9975acd1b137a8 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 267 2.1E-21 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_05855 407eb32e1b80f4e6fa9975acd1b137a8 278 SUPERFAMILY SSF161098 4 278 6.07E-69 T 31-10-2018 IPR035906 MetI-like superfamily DY252_06790 26392d2fd0325d443f0c56aed42c9fd9 85 Pfam PF09413 Putative prokaryotic signal transducing protein 1 63 2.1E-16 T 31-10-2018 IPR018551 Domain of unknown function DUF2007 DY252_06790 26392d2fd0325d443f0c56aed42c9fd9 85 SUPERFAMILY SSF54913 1 69 1.8E-17 T 31-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DY252_06790 26392d2fd0325d443f0c56aed42c9fd9 85 Gene3D G3DSA:3.30.70.790 1 75 7.5E-25 T 31-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 DY252_07475 ccabc831837cf0771369a4a0b4e839b5 607 SMART SM00044 408 587 8.1E-4 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_07475 ccabc831837cf0771369a4a0b4e839b5 607 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 445 603 2.7E-15 T 31-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 DY252_07475 ccabc831837cf0771369a4a0b4e839b5 607 Gene3D G3DSA:3.30.70.1230 408 607 5.7E-49 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_07475 ccabc831837cf0771369a4a0b4e839b5 607 SUPERFAMILY SSF55073 442 605 4.4E-38 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_11405 3b6e757e7cede71419866ed6425fd5c2 711 SUPERFAMILY SSF56112 134 324 1.15E-13 T 31-10-2018 IPR011009 Protein kinase-like domain superfamily DY252_11405 3b6e757e7cede71419866ed6425fd5c2 711 Gene3D G3DSA:1.10.510.10 147 344 8.6E-13 T 31-10-2018 DY252_11405 3b6e757e7cede71419866ed6425fd5c2 711 SMART SM00220 69 315 0.0059 T 31-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DY252_06465 91cfb02acf7e339a98d4738474cc9c37 399 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 204 370 1.3E-33 T 31-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 DY252_06465 91cfb02acf7e339a98d4738474cc9c37 399 Gene3D G3DSA:3.40.50.2000 181 362 6.1E-96 T 31-10-2018 DY252_06465 91cfb02acf7e339a98d4738474cc9c37 399 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 20 373 4.4E-90 T 31-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_06465 91cfb02acf7e339a98d4738474cc9c37 399 Gene3D G3DSA:3.40.50.2000 23 368 6.1E-96 T 31-10-2018 DY252_06465 91cfb02acf7e339a98d4738474cc9c37 399 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 21 378 31.742 T 31-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_06465 91cfb02acf7e339a98d4738474cc9c37 399 SUPERFAMILY SSF53756 21 378 1.24E-100 T 31-10-2018 DY252_06465 91cfb02acf7e339a98d4738474cc9c37 399 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 21 157 4.2E-29 T 31-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_10175 debbec4b7f92a1e2237b35e7255fa3a3 690 Pfam PF13432 Tetratricopeptide repeat 182 237 6.5E-6 T 31-10-2018 DY252_10175 debbec4b7f92a1e2237b35e7255fa3a3 690 Gene3D G3DSA:1.25.40.10 2 312 3.4E-48 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_10175 debbec4b7f92a1e2237b35e7255fa3a3 690 Pfam PF14559 Tetratricopeptide repeat 52 112 7.9E-7 T 31-10-2018 DY252_10175 debbec4b7f92a1e2237b35e7255fa3a3 690 Pfam PF13844 Glycosyl transferase family 41 494 682 3.3E-8 T 31-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 DY252_10175 debbec4b7f92a1e2237b35e7255fa3a3 690 Pfam PF13844 Glycosyl transferase family 41 328 449 6.7E-13 T 31-10-2018 IPR029489 O-GlcNAc transferase, C-terminal KEGG: 00514+2.4.1.255|MetaCyc: PWY-7437|Reactome: R-HSA-3214847|Reactome: R-HSA-5689603 DY252_10175 debbec4b7f92a1e2237b35e7255fa3a3 690 SUPERFAMILY SSF48452 7 323 6.83E-33 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_10175 debbec4b7f92a1e2237b35e7255fa3a3 690 Pfam PF13181 Tetratricopeptide repeat 6 37 0.18 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_10175 debbec4b7f92a1e2237b35e7255fa3a3 690 Pfam PF13181 Tetratricopeptide repeat 142 170 0.093 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_10175 debbec4b7f92a1e2237b35e7255fa3a3 690 Gene3D G3DSA:3.40.50.2000 485 664 1.4E-75 T 31-10-2018 DY252_10175 debbec4b7f92a1e2237b35e7255fa3a3 690 SMART SM00028 175 208 16.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_10175 debbec4b7f92a1e2237b35e7255fa3a3 690 SMART SM00028 39 72 22.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_10175 debbec4b7f92a1e2237b35e7255fa3a3 690 SMART SM00028 107 140 150.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_10175 debbec4b7f92a1e2237b35e7255fa3a3 690 SMART SM00028 209 242 9.2 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_10175 debbec4b7f92a1e2237b35e7255fa3a3 690 SMART SM00028 5 38 0.27 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_10175 debbec4b7f92a1e2237b35e7255fa3a3 690 SMART SM00028 141 174 92.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_10175 debbec4b7f92a1e2237b35e7255fa3a3 690 SMART SM00028 73 106 0.51 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_10175 debbec4b7f92a1e2237b35e7255fa3a3 690 Gene3D G3DSA:3.40.50.11380 314 670 1.4E-75 T 31-10-2018 DY252_04990 270e78f8360901ec7252e731e18e0ad7 273 Pfam PF13847 Methyltransferase domain 65 157 1.3E-16 T 31-10-2018 IPR025714 Methyltransferase domain DY252_04990 270e78f8360901ec7252e731e18e0ad7 273 SUPERFAMILY SSF53335 52 224 2.26E-24 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_04990 270e78f8360901ec7252e731e18e0ad7 273 Gene3D G3DSA:3.40.50.150 18 228 1.8E-23 T 31-10-2018 DY252_19600 2a92109631c92bcc7e636e525093cdfd 691 SUPERFAMILY SSF52317 259 510 5.95E-44 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_19600 2a92109631c92bcc7e636e525093cdfd 691 Gene3D G3DSA:3.40.50.880 331 509 2.2E-26 T 31-10-2018 IPR029062 Class I glutamine amidotransferase-like DY252_18805 3fee2d2c3ad1966d652dbc224d2c7e8e 351 Pfam PF07582 AP endonuclease family 2 C terminus 280 334 4.8E-22 T 31-10-2018 IPR011418 AP endonuclease, family 2, C-terminal DY252_18805 3fee2d2c3ad1966d652dbc224d2c7e8e 351 Pfam PF01261 Xylose isomerase-like TIM barrel 29 279 1.7E-37 T 31-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DY252_18805 3fee2d2c3ad1966d652dbc224d2c7e8e 351 SUPERFAMILY SSF51658 8 323 1.38E-64 T 31-10-2018 IPR036237 Xylose isomerase-like superfamily DY252_18805 3fee2d2c3ad1966d652dbc224d2c7e8e 351 Gene3D G3DSA:3.20.20.150 20 325 1.9E-74 T 31-10-2018 DY252_22135 ce35eaf024c6e12297c0505e1ce8ffcb 176 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 15 160 3.4E-13 T 31-10-2018 IPR009936 Protein of unknown function DUF1468 DY252_05765 714399cf20e8d7fa77e5510f4df61ece 261 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 3 261 3.3E-86 T 31-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 DY252_20030 06ef21e5493e106b50b19e9df8129619 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 270 1.0E-19 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_20030 06ef21e5493e106b50b19e9df8129619 276 SUPERFAMILY SSF161098 6 276 2.62E-61 T 31-10-2018 IPR035906 MetI-like superfamily DY252_20030 06ef21e5493e106b50b19e9df8129619 276 Gene3D G3DSA:1.10.3720.10 1 268 1.7E-50 T 31-10-2018 IPR035906 MetI-like superfamily DY252_14400 27e7417dbf04d882354bd464777cf416 100 PIRSF PIRSF028291 1 97 2.7E-27 T 31-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 DY252_14400 27e7417dbf04d882354bd464777cf416 100 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 6 92 2.7E-27 T 31-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 DY252_14400 27e7417dbf04d882354bd464777cf416 100 Gene3D G3DSA:3.30.310.50 1 96 1.7E-27 T 31-10-2018 DY252_19275 58be02a309fd35264b4780b6ed5e686d 134 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 4 122 1.2E-19 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_12750 ab2604b6eb3d6c26e93236972bdb816c 228 Gene3D G3DSA:1.10.150.730 24 87 7.0E-47 T 31-10-2018 DY252_12750 ab2604b6eb3d6c26e93236972bdb816c 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 188 1.8E-31 T 31-10-2018 DY252_12750 ab2604b6eb3d6c26e93236972bdb816c 228 Gene3D G3DSA:3.40.50.1000 12 187 7.0E-47 T 31-10-2018 IPR023214 HAD superfamily DY252_12750 ab2604b6eb3d6c26e93236972bdb816c 228 SUPERFAMILY SSF56784 7 223 3.58E-47 T 31-10-2018 IPR036412 HAD-like superfamily DY252_12750 ab2604b6eb3d6c26e93236972bdb816c 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 183 3.8E-6 T 31-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DY252_07345 c761375e2a5bb0eda945f8be774838f3 465 PIRSF PIRSF000204 1 465 1.2E-216 T 31-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 DY252_07345 c761375e2a5bb0eda945f8be774838f3 465 Pfam PF02233 NAD(P) transhydrogenase beta subunit 8 460 4.4E-196 T 31-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 DY252_07345 c761375e2a5bb0eda945f8be774838f3 465 SUPERFAMILY SSF52467 291 464 1.73E-76 T 31-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DY252_07345 c761375e2a5bb0eda945f8be774838f3 465 Gene3D G3DSA:3.40.50.1220 287 464 3.5E-83 T 31-10-2018 DY252_11120 a29473bdd0580366f9c52d559dbdd6d3 197 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 9 184 1.9E-32 T 31-10-2018 IPR003740 Uncharacterised membrane protein YitT DY252_02865 d6236f435ea9ef0f797aee13e1c04cf4 373 SUPERFAMILY SSF161098 137 353 1.13E-14 T 31-10-2018 IPR035906 MetI-like superfamily DY252_02865 d6236f435ea9ef0f797aee13e1c04cf4 373 Gene3D G3DSA:1.10.3720.10 129 360 3.2E-18 T 31-10-2018 IPR035906 MetI-like superfamily DY252_02865 d6236f435ea9ef0f797aee13e1c04cf4 373 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 159 366 1.3E-35 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_17665 93bd5b23098c70805d68b6d4af3ad5c0 418 Pfam PF02108 Flagellar assembly protein FliH 101 216 4.0E-10 T 31-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE DY252_04025 20b02033d0057216718208fe656c48bd 386 PIRSF PIRSF000443 2 384 1.4E-136 T 31-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 DY252_04025 20b02033d0057216718208fe656c48bd 386 Gene3D G3DSA:3.40.50.1820 28 365 8.3E-141 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_04025 20b02033d0057216718208fe656c48bd 386 Pfam PF00561 alpha/beta hydrolase fold 53 364 1.4E-27 T 31-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DY252_04025 20b02033d0057216718208fe656c48bd 386 Gene3D G3DSA:1.10.1740.110 189 295 8.3E-141 T 31-10-2018 DY252_04025 20b02033d0057216718208fe656c48bd 386 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 5 377 31.034 T 31-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 DY252_04025 20b02033d0057216718208fe656c48bd 386 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 23 376 2.3E-141 T 31-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 DY252_04025 20b02033d0057216718208fe656c48bd 386 SUPERFAMILY SSF53474 22 377 1.07E-100 T 31-10-2018 IPR029058 Alpha/Beta hydrolase fold DY252_11060 5ccb8e7ce8f95727a4f77a62bda074b4 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 256 5.6E-28 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_11060 5ccb8e7ce8f95727a4f77a62bda074b4 270 SUPERFAMILY SSF161098 66 255 3.01E-29 T 31-10-2018 IPR035906 MetI-like superfamily DY252_11060 5ccb8e7ce8f95727a4f77a62bda074b4 270 Gene3D G3DSA:1.10.3720.10 62 258 7.5E-21 T 31-10-2018 IPR035906 MetI-like superfamily DY252_01220 8fc4fe4bab1cc143ec0b2c167e52fac3 316 TIGRFAM TIGR01139 cysK: cysteine synthase A 14 312 2.4E-134 T 31-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DY252_01220 8fc4fe4bab1cc143ec0b2c167e52fac3 316 Gene3D G3DSA:3.40.50.1100 52 153 7.3E-122 T 31-10-2018 DY252_01220 8fc4fe4bab1cc143ec0b2c167e52fac3 316 TIGRFAM TIGR01136 cysKM: cysteine synthase 13 312 2.1E-130 T 31-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DY252_01220 8fc4fe4bab1cc143ec0b2c167e52fac3 316 SUPERFAMILY SSF53686 7 312 1.96E-99 T 31-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DY252_01220 8fc4fe4bab1cc143ec0b2c167e52fac3 316 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 14 300 4.8E-66 T 31-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DY252_01220 8fc4fe4bab1cc143ec0b2c167e52fac3 316 Gene3D G3DSA:3.40.50.1100 14 307 7.3E-122 T 31-10-2018 DY252_20780 48efc63b04574e2ea3ae58a764d6f895 164 Gene3D G3DSA:3.10.450.50 25 145 5.7E-5 T 31-10-2018 DY252_20780 48efc63b04574e2ea3ae58a764d6f895 164 Pfam PF12883 Protein of unknown function (DUF3828) 55 144 4.3E-6 T 31-10-2018 IPR024289 Domain of unknown function DUF3828 DY252_02360 ae69fd8090d581c1bd10b150f27e21ca 499 Gene3D G3DSA:3.40.309.10 256 450 6.6E-137 T 31-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DY252_02360 ae69fd8090d581c1bd10b150f27e21ca 499 Gene3D G3DSA:3.40.605.10 21 475 6.6E-137 T 31-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DY252_02360 ae69fd8090d581c1bd10b150f27e21ca 499 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 31-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DY252_02360 ae69fd8090d581c1bd10b150f27e21ca 499 SUPERFAMILY SSF53720 18 486 1.18E-131 T 31-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DY252_02360 ae69fd8090d581c1bd10b150f27e21ca 499 Pfam PF00171 Aldehyde dehydrogenase family 20 477 1.1E-126 T 31-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DY252_16600 c2974c06c1bab09d68994b6f86e222bc 200 Gene3D G3DSA:4.10.1070.10 109 134 1.4E-23 T 31-10-2018 DY252_16600 c2974c06c1bab09d68994b6f86e222bc 200 SUPERFAMILY SSF88874 54 194 6.28E-41 T 31-10-2018 DY252_16600 c2974c06c1bab09d68994b6f86e222bc 200 Pfam PF07484 Phage Tail Collar Domain 55 112 2.6E-23 T 31-10-2018 IPR011083 Phage tail collar domain DY252_16600 c2974c06c1bab09d68994b6f86e222bc 200 Gene3D G3DSA:3.90.1340.10 54 108 1.4E-23 T 31-10-2018 IPR037053 Phage tail collar domain superfamily DY252_17960 719f9d1e127cb14456f95e45c0239dc0 248 Pfam PF01925 Sulfite exporter TauE/SafE 10 238 7.3E-25 T 31-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DY252_04065 d8c96eaeb3c44c3d236d3f4ebf1d6c3a 242 Pfam PF02698 DUF218 domain 54 166 1.5E-9 T 31-10-2018 IPR003848 Domain of unknown function DUF218 DY252_04065 d8c96eaeb3c44c3d236d3f4ebf1d6c3a 242 ProDom PD207074 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED RC1356 RP875 30 169 4.0E-6 T 31-10-2018 DY252_07860 841b6a6e3c3d0cb380b3e549127a96b1 249 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 246 4.2E-8 T 31-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DY252_07860 841b6a6e3c3d0cb380b3e549127a96b1 249 Gene3D G3DSA:3.40.50.300 1 247 2.0E-52 T 31-10-2018 DY252_07860 841b6a6e3c3d0cb380b3e549127a96b1 249 SMART SM00382 30 224 2.7E-8 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_07860 841b6a6e3c3d0cb380b3e549127a96b1 249 Pfam PF00005 ABC transporter 22 177 1.3E-27 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_07860 841b6a6e3c3d0cb380b3e549127a96b1 249 SUPERFAMILY SSF52540 5 246 3.63E-56 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_13980 c28e47f0aebc70c1b82b382a653929b2 165 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 39 161 6.5E-16 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_16720 f8954e1c91228cd209cb2bddde445557 135 Gene3D G3DSA:1.20.120.550 4 133 2.6E-18 T 31-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily DY252_16720 f8954e1c91228cd209cb2bddde445557 135 Pfam PF01124 MAPEG family 8 122 8.5E-19 T 31-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein DY252_16720 f8954e1c91228cd209cb2bddde445557 135 SUPERFAMILY SSF161084 4 123 2.75E-19 T 31-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily DY252_11650 ca30e4b4eb251b1c357be44c42d5703d 307 Pfam PF03547 Membrane transport protein 159 300 9.6E-11 T 31-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DY252_11650 ca30e4b4eb251b1c357be44c42d5703d 307 Gene3D G3DSA:1.20.1530.20 160 306 1.4E-9 T 31-10-2018 IPR038770 Sodium/solute symporter superfamily DY252_03985 0a3466789ef4a4d5470e8e9bf6915292 146 Pfam PF02152 Dihydroneopterin aldolase 31 140 1.9E-24 T 31-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DY252_03985 0a3466789ef4a4d5470e8e9bf6915292 146 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 30 141 1.1E-22 T 31-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DY252_03985 0a3466789ef4a4d5470e8e9bf6915292 146 TIGRFAM TIGR00526 folB_dom: FolB domain 30 143 1.7E-19 T 31-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DY252_03985 0a3466789ef4a4d5470e8e9bf6915292 146 SMART SM00905 31 141 2.6E-31 T 31-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DY252_03985 0a3466789ef4a4d5470e8e9bf6915292 146 Gene3D G3DSA:3.30.1130.10 8 145 3.5E-43 T 31-10-2018 DY252_03985 0a3466789ef4a4d5470e8e9bf6915292 146 SUPERFAMILY SSF55620 28 142 2.67E-26 T 31-10-2018 DY252_11215 ef46ba02ef0cdae2c6c6600657d363d6 524 Pfam PF02652 L-lactate permease 3 511 7.3E-82 T 31-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 DY252_14580 0a83b099f56e78fc7aa2b4e78c0645b7 297 Pfam PF00892 EamA-like transporter family 153 283 8.4E-10 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_14580 0a83b099f56e78fc7aa2b4e78c0645b7 297 Pfam PF00892 EamA-like transporter family 9 138 3.6E-17 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_14580 0a83b099f56e78fc7aa2b4e78c0645b7 297 SUPERFAMILY SSF103481 203 283 9.15E-7 T 31-10-2018 DY252_14580 0a83b099f56e78fc7aa2b4e78c0645b7 297 SUPERFAMILY SSF103481 40 141 1.83E-12 T 31-10-2018 DY252_14725 19b05b2eff20e184eb3a39eb19b15c7e 381 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 13 369 39.682 T 31-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DY252_14725 19b05b2eff20e184eb3a39eb19b15c7e 381 Gene3D G3DSA:2.40.30.10 289 374 4.4E-19 T 31-10-2018 DY252_14725 19b05b2eff20e184eb3a39eb19b15c7e 381 Gene3D G3DSA:2.30.30.280 229 288 1.6E-18 T 31-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DY252_14725 19b05b2eff20e184eb3a39eb19b15c7e 381 SUPERFAMILY SSF52402 12 258 8.16E-48 T 31-10-2018 DY252_14725 19b05b2eff20e184eb3a39eb19b15c7e 381 Gene3D G3DSA:3.40.50.620 5 223 4.7E-71 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_14725 19b05b2eff20e184eb3a39eb19b15c7e 381 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 14 368 3.0E-100 T 31-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DY252_14725 19b05b2eff20e184eb3a39eb19b15c7e 381 Pfam PF03054 tRNA methyl transferase 14 368 3.5E-118 T 31-10-2018 DY252_19690 c9e708fd177b93e90ad64bd32ef59236 356 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 337 2.4E-40 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_07730 5fbc44dc152558018a59473d18ccb7d8 236 SUPERFAMILY SSF101082 27 218 2.88E-5 T 31-10-2018 DY252_07730 5fbc44dc152558018a59473d18ccb7d8 236 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 19 232 4.4E-47 T 31-10-2018 IPR014147 Type IV conjugative transfer protein TrbJ DY252_00950 decd60ced3e22d3bace0192e71a3f98e 272 SUPERFAMILY SSF54001 6 252 1.74E-38 T 31-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DY252_00950 decd60ced3e22d3bace0192e71a3f98e 272 Pfam PF01841 Transglutaminase-like superfamily 116 224 1.5E-24 T 31-10-2018 IPR002931 Transglutaminase-like DY252_00950 decd60ced3e22d3bace0192e71a3f98e 272 Gene3D G3DSA:3.10.620.30 76 258 3.9E-45 T 31-10-2018 DY252_00950 decd60ced3e22d3bace0192e71a3f98e 272 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 81 1.4E-14 T 31-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal DY252_00950 decd60ced3e22d3bace0192e71a3f98e 272 SMART SM00460 161 226 5.5E-15 T 31-10-2018 IPR002931 Transglutaminase-like DY252_00775 148e5bf4e587556bcca99de5f22f7406 258 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 31 247 2.9E-43 T 31-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain DY252_01395 d33a15e420ca03095100b0390fc160d9 145 Gene3D G3DSA:3.10.450.50 4 145 4.5E-39 T 31-10-2018 DY252_01395 d33a15e420ca03095100b0390fc160d9 145 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 8 127 1.6E-12 T 31-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 DY252_01395 d33a15e420ca03095100b0390fc160d9 145 Pfam PF13474 SnoaL-like domain 12 132 2.8E-16 T 31-10-2018 IPR037401 SnoaL-like domain DY252_01395 d33a15e420ca03095100b0390fc160d9 145 SUPERFAMILY SSF54427 5 133 1.09E-31 T 31-10-2018 IPR032710 NTF2-like domain superfamily DY252_09240 d7c8a7975c8b5fee4ee3e4ec08b83d6d 373 Gene3D G3DSA:3.40.50.300 2 242 1.6E-6 T 31-10-2018 DY252_09240 d7c8a7975c8b5fee4ee3e4ec08b83d6d 373 SUPERFAMILY SSF52540 2 224 2.98E-8 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_17345 2ab5fe2697e7bee02536b0caff807d2c 47 Pfam PF08085 Entericidin EcnA/B family 25 45 2.8E-6 T 31-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 DY252_21610 0d7541e2c1c790447a99e62967008ef7 517 Gene3D G3DSA:1.25.40.10 62 171 2.8E-28 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_21610 0d7541e2c1c790447a99e62967008ef7 517 SMART SM00028 102 135 1.5E-5 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_21610 0d7541e2c1c790447a99e62967008ef7 517 SMART SM00028 68 101 0.0012 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_21610 0d7541e2c1c790447a99e62967008ef7 517 SMART SM00028 170 203 0.011 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_21610 0d7541e2c1c790447a99e62967008ef7 517 SMART SM00028 136 169 1.9E-5 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_21610 0d7541e2c1c790447a99e62967008ef7 517 Pfam PF13432 Tetratricopeptide repeat 73 136 8.0E-11 T 31-10-2018 DY252_21610 0d7541e2c1c790447a99e62967008ef7 517 SUPERFAMILY SSF48452 70 235 5.5E-39 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_21610 0d7541e2c1c790447a99e62967008ef7 517 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 430 463 4.0E-5 T 31-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DY252_21610 0d7541e2c1c790447a99e62967008ef7 517 SUPERFAMILY SSF53756 256 492 1.69E-19 T 31-10-2018 DY252_21610 0d7541e2c1c790447a99e62967008ef7 517 Gene3D G3DSA:3.40.50.2000 415 492 3.3E-8 T 31-10-2018 DY252_21610 0d7541e2c1c790447a99e62967008ef7 517 Pfam PF13424 Tetratricopeptide repeat 138 201 2.8E-10 T 31-10-2018 DY252_21610 0d7541e2c1c790447a99e62967008ef7 517 Gene3D G3DSA:1.25.40.10 172 257 4.7E-11 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_17930 3bcaadb16579f2362a2efc60b0b13ba9 114 Pfam PF01906 Putative heavy-metal-binding 11 112 2.9E-33 T 31-10-2018 IPR002765 Uncharacterised protein family UPF0145 DY252_17930 3bcaadb16579f2362a2efc60b0b13ba9 114 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 11 113 21.797 T 31-10-2018 IPR002765 Uncharacterised protein family UPF0145 DY252_17930 3bcaadb16579f2362a2efc60b0b13ba9 114 SUPERFAMILY SSF117782 11 114 6.41E-32 T 31-10-2018 IPR035439 UPF0145 domain superfamily DY252_17930 3bcaadb16579f2362a2efc60b0b13ba9 114 Gene3D G3DSA:3.30.110.70 13 114 1.2E-29 T 31-10-2018 DY252_11790 328404f38c76314a796a20e97ee930fe 156 Gene3D G3DSA:3.10.450.160 64 155 2.2E-25 T 31-10-2018 DY252_08830 2313b3ff483e5287d48c765578e29969 184 Gene3D G3DSA:3.40.630.30 10 184 1.3E-50 T 31-10-2018 DY252_08830 2313b3ff483e5287d48c765578e29969 184 Pfam PF13673 Acetyltransferase (GNAT) domain 66 159 3.3E-15 T 31-10-2018 IPR000182 GNAT domain DY252_08830 2313b3ff483e5287d48c765578e29969 184 SUPERFAMILY SSF55729 25 180 7.2E-27 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_19995 a59e87f2e8b2c0f9b255af7711b629d3 144 SUPERFAMILY SSF69118 3 140 2.49E-33 T 31-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DY252_19995 a59e87f2e8b2c0f9b255af7711b629d3 144 Pfam PF02627 Carboxymuconolactone decarboxylase family 11 93 5.5E-14 T 31-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DY252_19995 a59e87f2e8b2c0f9b255af7711b629d3 144 Gene3D G3DSA:1.20.1290.10 1 143 8.4E-36 T 31-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DY252_19995 a59e87f2e8b2c0f9b255af7711b629d3 144 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 31 74 2.3E-11 T 31-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DY252_16685 09437b22d115dd4bac145ea3c9e135f4 194 SUPERFAMILY SSF46689 4 74 4.57E-15 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_16685 09437b22d115dd4bac145ea3c9e135f4 194 Gene3D G3DSA:1.10.357.10 4 193 2.1E-36 T 31-10-2018 DY252_16685 09437b22d115dd4bac145ea3c9e135f4 194 SUPERFAMILY SSF48498 80 187 1.72E-14 T 31-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DY252_16685 09437b22d115dd4bac145ea3c9e135f4 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 3.0E-11 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_05730 8a8c637365ca1229eaa84a5614ec1c09 149 Gene3D G3DSA:1.10.530.10 1 147 3.0E-33 T 31-10-2018 DY252_05730 8a8c637365ca1229eaa84a5614ec1c09 149 SUPERFAMILY SSF53955 3 145 1.23E-28 T 31-10-2018 IPR023346 Lysozyme-like domain superfamily DY252_05730 8a8c637365ca1229eaa84a5614ec1c09 149 Pfam PF01464 Transglycosylase SLT domain 2 104 2.1E-18 T 31-10-2018 IPR008258 Transglycosylase SLT domain 1 DY252_07735 697a7ccfe758a806f533d838ed18e69b 444 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 2 302 1.2E-59 T 31-10-2018 IPR014150 Conjugal transfer, TrbL DY252_07735 697a7ccfe758a806f533d838ed18e69b 444 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 37 254 1.8E-45 T 31-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 DY252_04475 188d1813c5eb3ed71b2bf8b83e512567 262 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 41 223 7.3E-82 T 31-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_04475 188d1813c5eb3ed71b2bf8b83e512567 262 Pfam PF01578 Cytochrome C assembly protein 15 180 3.3E-29 T 31-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DY252_04475 188d1813c5eb3ed71b2bf8b83e512567 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 117 137 4.4E-57 T 31-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_04475 188d1813c5eb3ed71b2bf8b83e512567 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 152 178 4.4E-57 T 31-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_04475 188d1813c5eb3ed71b2bf8b83e512567 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 58 78 4.4E-57 T 31-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_04475 188d1813c5eb3ed71b2bf8b83e512567 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 41 58 4.4E-57 T 31-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_04475 188d1813c5eb3ed71b2bf8b83e512567 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 200 224 4.4E-57 T 31-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_04475 188d1813c5eb3ed71b2bf8b83e512567 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 96 116 4.4E-57 T 31-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DY252_09725 c4d3d4df4fc52198df56b1545595bae1 247 Gene3D G3DSA:3.40.50.720 7 246 1.5E-68 T 31-10-2018 DY252_09725 c4d3d4df4fc52198df56b1545595bae1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.7E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09725 c4d3d4df4fc52198df56b1545595bae1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.7E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09725 c4d3d4df4fc52198df56b1545595bae1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.7E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09725 c4d3d4df4fc52198df56b1545595bae1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.7E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09725 c4d3d4df4fc52198df56b1545595bae1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.7E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09725 c4d3d4df4fc52198df56b1545595bae1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.7E-38 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09725 c4d3d4df4fc52198df56b1545595bae1 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.9E-10 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09725 c4d3d4df4fc52198df56b1545595bae1 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.9E-10 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09725 c4d3d4df4fc52198df56b1545595bae1 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.9E-10 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_09725 c4d3d4df4fc52198df56b1545595bae1 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 1.1E-45 T 31-10-2018 DY252_09725 c4d3d4df4fc52198df56b1545595bae1 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 31-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DY252_09725 c4d3d4df4fc52198df56b1545595bae1 247 SUPERFAMILY SSF51735 7 246 3.97E-66 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_02495 a17ebaf1fc1b0a0973e8dbd84340a52b 316 Pfam PF03547 Membrane transport protein 160 303 8.2E-16 T 31-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DY252_02495 a17ebaf1fc1b0a0973e8dbd84340a52b 316 Pfam PF03547 Membrane transport protein 8 149 4.0E-21 T 31-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DY252_07350 8a8a043afb09b1e3797c7d36f9f4c5ab 613 Pfam PF13175 AAA ATPase domain 1 374 1.9E-70 T 31-10-2018 DY252_07350 8a8a043afb09b1e3797c7d36f9f4c5ab 613 SUPERFAMILY SSF52540 1 380 6.38E-23 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_07350 8a8a043afb09b1e3797c7d36f9f4c5ab 613 Gene3D G3DSA:3.40.50.300 1 385 9.6E-30 T 31-10-2018 DY252_15020 f1166e609181abd917fdc383b4c33bae 378 SUPERFAMILY SSF51905 8 370 1.47E-48 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_15020 f1166e609181abd917fdc383b4c33bae 378 Gene3D G3DSA:3.50.50.60 7 361 1.3E-136 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_15020 f1166e609181abd917fdc383b4c33bae 378 Pfam PF01266 FAD dependent oxidoreductase 7 367 3.2E-68 T 31-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DY252_15020 f1166e609181abd917fdc383b4c33bae 378 Gene3D G3DSA:3.30.9.10 87 323 1.3E-136 T 31-10-2018 DY252_11800 aabab1a4c9dfd71cef0974fd94dfbe96 315 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 31-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DY252_11800 aabab1a4c9dfd71cef0974fd94dfbe96 315 SUPERFAMILY SSF53613 5 305 1.39E-57 T 31-10-2018 IPR029056 Ribokinase-like DY252_11800 aabab1a4c9dfd71cef0974fd94dfbe96 315 Gene3D G3DSA:3.40.1190.20 4 314 1.7E-72 T 31-10-2018 IPR029056 Ribokinase-like DY252_11800 aabab1a4c9dfd71cef0974fd94dfbe96 315 Pfam PF00294 pfkB family carbohydrate kinase 5 294 8.9E-45 T 31-10-2018 IPR011611 Carbohydrate kinase PfkB DY252_21875 2d35fdedfadee51a9237638577ceef4c 146 SUPERFAMILY SSF53795 4 120 2.14E-16 T 31-10-2018 DY252_21875 2d35fdedfadee51a9237638577ceef4c 146 Pfam PF07475 HPr Serine kinase C-terminal domain 2 76 1.5E-14 T 31-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 DY252_21875 2d35fdedfadee51a9237638577ceef4c 146 Gene3D G3DSA:3.40.50.300 1 138 5.1E-31 T 31-10-2018 DY252_05710 6e09dc8172a8edd99f611fe441a3b0d6 156 Pfam PF04717 Type VI secretion system, phage-baseplate injector 6 118 1.5E-18 T 31-10-2018 IPR006531 Gp5 N-terminal DY252_05710 6e09dc8172a8edd99f611fe441a3b0d6 156 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 10 134 5.9E-16 T 31-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 DY252_05710 6e09dc8172a8edd99f611fe441a3b0d6 156 Gene3D G3DSA:2.40.50.230 1 88 8.6E-19 T 31-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily DY252_22085 a0a4ef33c0a010af4e2aadeb5117b010 241 Pfam PF04172 LrgB-like family 24 238 2.4E-81 T 31-10-2018 IPR007300 CidB/LrgB family DY252_11350 1cb2e3b4670642715aecc0dd46fe22e1 259 SUPERFAMILY SSF110997 177 255 1.44E-7 T 31-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DY252_11350 1cb2e3b4670642715aecc0dd46fe22e1 259 Pfam PF05036 Sporulation related domain 177 256 4.5E-10 T 31-10-2018 IPR007730 Sporulation-like domain GO:0042834 DY252_16550 a8fb28508827379aef50b746c48f42d1 140 Pfam PF07681 DoxX 15 95 1.6E-12 T 31-10-2018 IPR032808 DoxX family DY252_19895 e4b3ca645e5add1e55149cc98b13f371 243 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 6 238 6.9E-107 T 31-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO DY252_19895 e4b3ca645e5add1e55149cc98b13f371 243 SUPERFAMILY SSF46626 20 225 4.79E-27 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_19895 e4b3ca645e5add1e55149cc98b13f371 243 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 6 231 2.9E-97 T 31-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO DY252_02665 d4dab7fa028a6ed5f700d923bc97f302 250 Pfam PF04343 Protein of unknown function, DUF488 65 175 1.9E-17 T 31-10-2018 IPR007438 Protein of unknown function DUF488 DY252_01860 c29e5dd7bf7390667cea2db014e4f57a 413 Pfam PF04932 O-Antigen ligase 198 341 2.7E-11 T 31-10-2018 IPR007016 O-antigen ligase-related DY252_12835 2953a1509c4c1f5874dbfae4f0df91ad 359 Gene3D G3DSA:3.40.718.10 4 348 5.4E-126 T 31-10-2018 DY252_12835 2953a1509c4c1f5874dbfae4f0df91ad 359 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 341 146.144 T 31-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DY252_12835 2953a1509c4c1f5874dbfae4f0df91ad 359 PIRSF PIRSF002465 3 341 2.9E-125 T 31-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DY252_12835 2953a1509c4c1f5874dbfae4f0df91ad 359 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 7 337 5.8E-101 T 31-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DY252_12835 2953a1509c4c1f5874dbfae4f0df91ad 359 Pfam PF02504 Fatty acid synthesis protein 6 325 1.5E-107 T 31-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 DY252_12835 2953a1509c4c1f5874dbfae4f0df91ad 359 SUPERFAMILY SSF53659 6 334 1.56E-106 T 31-10-2018 DY252_13350 0901a2e01f10c9ef33b5bba07b9d9d53 273 Pfam PF01148 Cytidylyltransferase family 20 265 1.3E-56 T 31-10-2018 DY252_09655 5658067027e7618826dfbbe1b4fedbdb 452 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 19 271 5.4E-71 T 31-10-2018 IPR017039 Virulence factor BrkB DY252_09655 5658067027e7618826dfbbe1b4fedbdb 452 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 4 308 21.589 T 31-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial DY252_09655 5658067027e7618826dfbbe1b4fedbdb 452 Pfam PF03631 Virulence factor BrkB 25 273 2.7E-56 T 31-10-2018 IPR017039 Virulence factor BrkB DY252_05805 fae7db572d81347ba3c95744db2ce181 879 SUPERFAMILY SSF63829 686 871 1.5E-8 T 31-10-2018 DY252_05805 fae7db572d81347ba3c95744db2ce181 879 SUPERFAMILY SSF63829 63 251 1.7E-7 T 31-10-2018 DY252_05805 fae7db572d81347ba3c95744db2ce181 879 SMART SM00706 441 476 8.6 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_05805 fae7db572d81347ba3c95744db2ce181 879 SMART SM00706 406 440 110.0 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_05805 fae7db572d81347ba3c95744db2ce181 879 SMART SM00706 82 116 1.4 T 31-10-2018 IPR006624 Beta-propeller repeat TECPR DY252_05805 fae7db572d81347ba3c95744db2ce181 879 Gene3D G3DSA:2.115.10.10 417 637 1.6E-7 T 31-10-2018 DY252_05805 fae7db572d81347ba3c95744db2ce181 879 SUPERFAMILY SSF101898 371 580 1.94E-8 T 31-10-2018 DY252_11380 ec70b5f17b400411e63bc46f5820ce24 274 Gene3D G3DSA:3.10.310.10 123 260 1.8E-89 T 31-10-2018 DY252_11380 ec70b5f17b400411e63bc46f5820ce24 274 Gene3D G3DSA:3.10.310.10 8 263 1.8E-89 T 31-10-2018 DY252_11380 ec70b5f17b400411e63bc46f5820ce24 274 SUPERFAMILY SSF54506 5 271 2.58E-77 T 31-10-2018 DY252_11380 ec70b5f17b400411e63bc46f5820ce24 274 Pfam PF02567 Phenazine biosynthesis-like protein 11 265 1.2E-57 T 31-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DY252_11380 ec70b5f17b400411e63bc46f5820ce24 274 PIRSF PIRSF016184 3 272 3.1E-55 T 31-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DY252_11380 ec70b5f17b400411e63bc46f5820ce24 274 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 6 230 4.1E-40 T 31-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DY252_11470 34d02c9ba00c5d74f80464f69afa0c98 341 SUPERFAMILY SSF53850 29 336 3.06E-80 T 31-10-2018 DY252_11470 34d02c9ba00c5d74f80464f69afa0c98 341 Gene3D G3DSA:3.40.190.10 125 331 8.9E-126 T 31-10-2018 DY252_11470 34d02c9ba00c5d74f80464f69afa0c98 341 Gene3D G3DSA:3.40.190.10 30 301 8.9E-126 T 31-10-2018 DY252_11470 34d02c9ba00c5d74f80464f69afa0c98 341 PIRSF PIRSF002825 4 341 1.4E-94 T 31-10-2018 IPR026045 Ferric binding protein DY252_11470 34d02c9ba00c5d74f80464f69afa0c98 341 Pfam PF13343 Bacterial extracellular solute-binding protein 75 299 1.8E-21 T 31-10-2018 DY252_00140 06cf1b22b994835ce37ee97bf7bcbc33 460 Pfam PF13437 HlyD family secretion protein 312 427 7.8E-18 T 31-10-2018 DY252_00140 06cf1b22b994835ce37ee97bf7bcbc33 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 92 112 1.7E-48 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_00140 06cf1b22b994835ce37ee97bf7bcbc33 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 424 439 1.7E-48 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_00140 06cf1b22b994835ce37ee97bf7bcbc33 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 439 459 1.7E-48 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_00140 06cf1b22b994835ce37ee97bf7bcbc33 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 50 73 1.7E-48 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_00140 06cf1b22b994835ce37ee97bf7bcbc33 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 357 381 1.7E-48 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_00140 06cf1b22b994835ce37ee97bf7bcbc33 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 324 345 1.7E-48 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_00140 06cf1b22b994835ce37ee97bf7bcbc33 460 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 381 404 1.7E-48 T 31-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DY252_00140 06cf1b22b994835ce37ee97bf7bcbc33 460 Pfam PF13533 Biotin-lipoyl like 90 125 4.0E-5 T 31-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DY252_00140 06cf1b22b994835ce37ee97bf7bcbc33 460 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 43 460 5.1E-115 T 31-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 DY252_00140 06cf1b22b994835ce37ee97bf7bcbc33 460 Gene3D G3DSA:1.10.287.470 250 311 3.2E-15 T 31-10-2018 DY252_00140 06cf1b22b994835ce37ee97bf7bcbc33 460 Gene3D G3DSA:2.40.30.170 349 436 3.2E-15 T 31-10-2018 DY252_00140 06cf1b22b994835ce37ee97bf7bcbc33 460 Gene3D G3DSA:2.40.50.100 249 348 3.2E-15 T 31-10-2018 DY252_17130 a3fb50be95631eabbd88d83ba965a5f2 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 272 1.1E-12 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_17130 a3fb50be95631eabbd88d83ba965a5f2 282 Gene3D G3DSA:1.10.3720.10 16 274 3.2E-52 T 31-10-2018 IPR035906 MetI-like superfamily DY252_17130 a3fb50be95631eabbd88d83ba965a5f2 282 SUPERFAMILY SSF161098 21 278 7.98E-54 T 31-10-2018 IPR035906 MetI-like superfamily DY252_17390 7507b0ac15c89b4f53bbe4090d00afd9 299 SUPERFAMILY SSF103481 40 145 1.7E-14 T 31-10-2018 DY252_17390 7507b0ac15c89b4f53bbe4090d00afd9 299 SUPERFAMILY SSF103481 194 298 1.44E-7 T 31-10-2018 DY252_17390 7507b0ac15c89b4f53bbe4090d00afd9 299 Pfam PF00892 EamA-like transporter family 5 141 2.1E-16 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_17390 7507b0ac15c89b4f53bbe4090d00afd9 299 Pfam PF00892 EamA-like transporter family 158 297 1.2E-12 T 31-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DY252_11055 5618272fcf3d1e1db03650e54728f653 317 Gene3D G3DSA:3.40.190.10 111 211 2.6E-73 T 31-10-2018 DY252_11055 5618272fcf3d1e1db03650e54728f653 317 Pfam PF09084 NMT1/THI5 like 39 250 2.1E-68 T 31-10-2018 IPR015168 SsuA/THI5-like DY252_11055 5618272fcf3d1e1db03650e54728f653 317 Gene3D G3DSA:3.40.190.10 30 303 2.6E-73 T 31-10-2018 DY252_11055 5618272fcf3d1e1db03650e54728f653 317 SUPERFAMILY SSF53850 32 312 3.91E-52 T 31-10-2018 DY252_02245 70012a45a57cf9459cf9ce8d8e3d209f 268 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 266 1.5E-58 T 31-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DY252_02245 70012a45a57cf9459cf9ce8d8e3d209f 268 Gene3D G3DSA:3.90.226.10 1 209 2.4E-59 T 31-10-2018 DY252_02245 70012a45a57cf9459cf9ce8d8e3d209f 268 SUPERFAMILY SSF52096 3 266 3.69E-76 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_02245 70012a45a57cf9459cf9ce8d8e3d209f 268 Gene3D G3DSA:1.10.12.10 210 268 1.4E-17 T 31-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DY252_14060 11fcb2faadcecfc234e41cbc7b3587a9 72 Pfam PF11324 Protein of unknown function (DUF3126) 5 67 1.9E-25 T 31-10-2018 IPR021473 Protein of unknown function DUF3126 DY252_11165 322e119f09993cce085481d447205d15 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 18.87 T 31-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_11165 322e119f09993cce085481d447205d15 59 SUPERFAMILY SSF57829 1 56 3.6E-20 T 31-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DY252_11165 322e119f09993cce085481d447205d15 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 56 1.2E-21 T 31-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_11165 322e119f09993cce085481d447205d15 59 Pfam PF01783 Ribosomal L32p protein family 2 56 3.2E-20 T 31-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DY252_00685 397e143acf75e204b9aa001d44859ef1 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 283 4.5E-37 T 31-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DY252_00685 397e143acf75e204b9aa001d44859ef1 318 Gene3D G3DSA:3.40.50.720 100 284 3.3E-83 T 31-10-2018 DY252_00685 397e143acf75e204b9aa001d44859ef1 318 SUPERFAMILY SSF51735 103 284 1.73E-37 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_00685 397e143acf75e204b9aa001d44859ef1 318 Gene3D G3DSA:3.40.50.720 27 318 3.3E-83 T 31-10-2018 DY252_11145 eab5b15315733f9c8e7418242eb07930 280 Gene3D G3DSA:3.40.50.300 2 235 3.9E-57 T 31-10-2018 DY252_11145 eab5b15315733f9c8e7418242eb07930 280 Pfam PF00005 ABC transporter 21 150 2.1E-28 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_11145 eab5b15315733f9c8e7418242eb07930 280 SMART SM00382 30 199 3.4E-9 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_11145 eab5b15315733f9c8e7418242eb07930 280 SUPERFAMILY SSF52540 3 215 9.94E-54 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_10375 486db6bda6b90412df7e8fabcd6bd4b9 317 SUPERFAMILY SSF52768 4 304 3.78E-93 T 31-10-2018 IPR023696 Ureohydrolase domain superfamily DY252_10375 486db6bda6b90412df7e8fabcd6bd4b9 317 TIGRFAM TIGR01230 agmatinase: agmatinase 22 301 1.0E-56 T 31-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 DY252_10375 486db6bda6b90412df7e8fabcd6bd4b9 317 Pfam PF00491 Arginase family 29 300 1.4E-83 T 31-10-2018 IPR006035 Ureohydrolase GO:0046872 DY252_10375 486db6bda6b90412df7e8fabcd6bd4b9 317 PRINTS PR00116 Arginase signature 228 257 1.3E-12 T 31-10-2018 IPR006035 Ureohydrolase GO:0046872 DY252_10375 486db6bda6b90412df7e8fabcd6bd4b9 317 PRINTS PR00116 Arginase signature 115 130 1.3E-12 T 31-10-2018 IPR006035 Ureohydrolase GO:0046872 DY252_10375 486db6bda6b90412df7e8fabcd6bd4b9 317 PIRSF PIRSF036979 4 307 7.0E-89 T 31-10-2018 IPR006035 Ureohydrolase GO:0046872 DY252_10375 486db6bda6b90412df7e8fabcd6bd4b9 317 ProSitePatterns PS01053 Arginase family signature. 231 252 - T 31-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 DY252_10375 486db6bda6b90412df7e8fabcd6bd4b9 317 Gene3D G3DSA:3.40.800.10 1 315 3.0E-110 T 31-10-2018 DY252_15575 14b79d0e5d0bf3ea13874c6a5dce5e66 394 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 384 1.4E-46 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_01975 9887bc23f3399da6f5290dd74bd65b82 166 PIRSF PIRSF032162 2 162 9.3E-44 T 31-10-2018 IPR016990 Uncharacterised conserved protein UCP032162, transmembrane DY252_01975 9887bc23f3399da6f5290dd74bd65b82 166 Pfam PF10003 Integral membrane protein (DUF2244) 16 154 2.6E-42 T 31-10-2018 IPR019253 Protein of unknown function DUF2244, transmembrane DY252_17540 53cf5e4e5f2ab5091bc525e0b256e4bb 178 Pfam PF03748 Flagellar basal body-associated protein FliL 81 178 3.8E-20 T 31-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 DY252_00880 519751600d1c0e484b3e2927345e5285 409 SUPERFAMILY SSF141868 231 400 4.32E-9 T 31-10-2018 IPR035919 EAL domain superfamily DY252_00880 519751600d1c0e484b3e2927345e5285 409 Gene3D G3DSA:3.20.20.450 189 409 2.1E-8 T 31-10-2018 IPR035919 EAL domain superfamily DY252_05995 5859b5e7385249e8d30056597afbfdb4 735 SMART SM00900 84 171 1.6E-7 T 31-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DY252_05995 5859b5e7385249e8d30056597afbfdb4 735 SUPERFAMILY SSF54862 521 688 5.59E-6 T 31-10-2018 DY252_05995 5859b5e7385249e8d30056597afbfdb4 735 PIRSF PIRSF036354 2 730 0.0 T 31-10-2018 IPR011399 Nitrous oxide reductase expression regulator NosR GO:0003677|GO:0016020|GO:0045893 DY252_05995 5859b5e7385249e8d30056597afbfdb4 735 Pfam PF04205 FMN-binding domain 84 163 2.1E-6 T 31-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DY252_05995 5859b5e7385249e8d30056597afbfdb4 735 Pfam PF12801 4Fe-4S binding domain 504 547 3.4E-13 T 31-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DY252_05995 5859b5e7385249e8d30056597afbfdb4 735 Pfam PF12801 4Fe-4S binding domain 604 641 1.4E-4 T 31-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DY252_03185 5a4480dfd9c1316371ffae15c14f850a 355 Gene3D G3DSA:3.40.50.2300 130 345 1.1E-141 T 31-10-2018 DY252_03185 5a4480dfd9c1316371ffae15c14f850a 355 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 26 304 6.0E-55 T 31-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 DY252_03185 5a4480dfd9c1316371ffae15c14f850a 355 Gene3D G3DSA:3.40.50.2300 27 283 1.1E-141 T 31-10-2018 DY252_04940 4c5f02b2764981c6ab252924c49f4523 258 SUPERFAMILY SSF51366 1 233 1.68E-57 T 31-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DY252_04940 4c5f02b2764981c6ab252924c49f4523 258 Pfam PF00977 Histidine biosynthesis protein 5 235 9.9E-63 T 31-10-2018 IPR006062 Histidine biosynthesis GO:0000105 DY252_04940 4c5f02b2764981c6ab252924c49f4523 258 Gene3D G3DSA:3.20.20.70 1 242 5.3E-75 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_02740 0b83a498228c5a968d2fe4fc8176a981 241 SUPERFAMILY SSF52266 55 234 1.27E-47 T 31-10-2018 DY252_02740 0b83a498228c5a968d2fe4fc8176a981 241 Gene3D G3DSA:3.40.50.1110 57 240 1.1E-67 T 31-10-2018 IPR036514 SGNH hydrolase superfamily DY252_02740 0b83a498228c5a968d2fe4fc8176a981 241 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 61 219 5.0E-25 T 31-10-2018 IPR013830 SGNH hydrolase-type esterase domain DY252_20515 adb6a1e2eb14fe447566329240019c08 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 7.0E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_20515 adb6a1e2eb14fe447566329240019c08 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 7.0E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_20515 adb6a1e2eb14fe447566329240019c08 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 7.0E-5 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_20515 adb6a1e2eb14fe447566329240019c08 326 SUPERFAMILY SSF53850 92 299 2.35E-29 T 31-10-2018 DY252_20515 adb6a1e2eb14fe447566329240019c08 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 70 4.6E-18 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_20515 adb6a1e2eb14fe447566329240019c08 326 Gene3D G3DSA:1.10.10.10 3 89 3.5E-24 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_20515 adb6a1e2eb14fe447566329240019c08 326 Gene3D G3DSA:3.40.190.10 172 271 7.3E-39 T 31-10-2018 DY252_20515 adb6a1e2eb14fe447566329240019c08 326 Gene3D G3DSA:3.40.190.10 97 295 7.3E-39 T 31-10-2018 DY252_20515 adb6a1e2eb14fe447566329240019c08 326 Pfam PF03466 LysR substrate binding domain 96 299 8.0E-17 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_20515 adb6a1e2eb14fe447566329240019c08 326 SUPERFAMILY SSF46785 9 87 7.42E-20 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_17685 ffdbd38a95ecd2fc625fe7e6c6ac866a 720 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 43 720 9.7E-275 T 31-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 DY252_17685 ffdbd38a95ecd2fc625fe7e6c6ac866a 720 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 169 192 - T 31-10-2018 IPR025505 FHIPEP conserved site DY252_17685 ffdbd38a95ecd2fc625fe7e6c6ac866a 720 Pfam PF00771 FHIPEP family 53 712 8.1E-263 T 31-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DY252_17685 ffdbd38a95ecd2fc625fe7e6c6ac866a 720 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 213 230 3.2E-53 T 31-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DY252_17685 ffdbd38a95ecd2fc625fe7e6c6ac866a 720 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 60 73 3.2E-53 T 31-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DY252_17685 ffdbd38a95ecd2fc625fe7e6c6ac866a 720 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 264 278 3.2E-53 T 31-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DY252_17685 ffdbd38a95ecd2fc625fe7e6c6ac866a 720 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 97 116 3.2E-53 T 31-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DY252_17685 ffdbd38a95ecd2fc625fe7e6c6ac866a 720 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 164 180 3.2E-53 T 31-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DY252_17685 ffdbd38a95ecd2fc625fe7e6c6ac866a 720 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 183 201 3.2E-53 T 31-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DY252_17685 ffdbd38a95ecd2fc625fe7e6c6ac866a 720 Gene3D G3DSA:3.40.30.60 387 530 4.5E-49 T 31-10-2018 DY252_17685 ffdbd38a95ecd2fc625fe7e6c6ac866a 720 PIRSF PIRSF005419 27 720 3.8E-239 T 31-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DY252_17685 ffdbd38a95ecd2fc625fe7e6c6ac866a 720 Gene3D G3DSA:1.10.490.80 623 720 1.5E-15 T 31-10-2018 DY252_17685 ffdbd38a95ecd2fc625fe7e6c6ac866a 720 Gene3D G3DSA:1.10.8.540 531 619 3.3E-24 T 31-10-2018 DY252_06975 1c54e8a15b8e07e0f58e45a02079b20b 214 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 26 166 1.3E-42 T 31-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related DY252_06975 1c54e8a15b8e07e0f58e45a02079b20b 214 SUPERFAMILY SSF50475 4 187 1.37E-57 T 31-10-2018 DY252_06975 1c54e8a15b8e07e0f58e45a02079b20b 214 Gene3D G3DSA:2.30.110.10 6 209 1.8E-67 T 31-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DY252_11375 198e39b4db2042e60b18cefa7c59b16e 476 SUPERFAMILY SSF53383 62 475 2.7E-97 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_11375 198e39b4db2042e60b18cefa7c59b16e 476 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 305 326 - T 31-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 DY252_11375 198e39b4db2042e60b18cefa7c59b16e 476 Gene3D G3DSA:3.90.1150.170 63 465 5.1E-108 T 31-10-2018 DY252_11375 198e39b4db2042e60b18cefa7c59b16e 476 Gene3D G3DSA:3.40.640.10 118 362 5.1E-108 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_11375 198e39b4db2042e60b18cefa7c59b16e 476 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 80 416 1.7E-46 T 31-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 DY252_08425 b4c2edbeea341fa40afae48892ea7367 387 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 25 373 2.9E-128 T 31-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_08425 b4c2edbeea341fa40afae48892ea7367 387 Pfam PF01098 Cell cycle protein 28 373 1.8E-99 T 31-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_08425 b4c2edbeea341fa40afae48892ea7367 387 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 19 376 27.484 T 31-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DY252_20410 86c5612c0fe544dbfb7db685bcb1eecb 447 SUPERFAMILY SSF51905 10 417 9.93E-53 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_20410 86c5612c0fe544dbfb7db685bcb1eecb 447 Pfam PF01593 Flavin containing amine oxidoreductase 18 277 8.3E-17 T 31-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 DY252_20410 86c5612c0fe544dbfb7db685bcb1eecb 447 Gene3D G3DSA:3.50.50.60 7 285 2.2E-23 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_20410 86c5612c0fe544dbfb7db685bcb1eecb 447 PRINTS PR00757 Flavin-containing amine oxidase signature 10 29 3.0E-5 T 31-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 DY252_20410 86c5612c0fe544dbfb7db685bcb1eecb 447 PRINTS PR00757 Flavin-containing amine oxidase signature 197 219 3.0E-5 T 31-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 DY252_13860 b99225b7c8db269d95f231302215bcf8 489 PIRSF PIRSF012702 1 488 1.8E-162 T 31-10-2018 IPR009197 Microcystin LR degradation protein MlrC DY252_13860 b99225b7c8db269d95f231302215bcf8 489 Pfam PF07364 Metallopeptidase family M81 2 288 2.4E-84 T 31-10-2018 IPR015995 Microcystin LR degradation protein MlrC, N-terminal DY252_13860 b99225b7c8db269d95f231302215bcf8 489 Pfam PF07171 MlrC C-terminus 297 471 2.2E-45 T 31-10-2018 IPR010799 Microcystin LR degradation protein MlrC, C-terminal DY252_19145 4f5138c26230105831d37e633043e625 195 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 29 157 5.2E-24 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_04335 f4beae2d6d63e87ea6f796d45a541fa8 243 Pfam PF02104 SURF1 family 20 220 2.9E-38 T 31-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_08060 3ee149c4b068e5ce5704d9a26d7884a5 377 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 248 7.9E-58 T 31-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain DY252_08060 3ee149c4b068e5ce5704d9a26d7884a5 377 SUPERFAMILY SSF103025 5 284 1.88E-69 T 31-10-2018 DY252_08060 3ee149c4b068e5ce5704d9a26d7884a5 377 Gene3D G3DSA:3.30.1360.120 1 365 1.6E-79 T 31-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DY252_08060 3ee149c4b068e5ce5704d9a26d7884a5 377 SUPERFAMILY SSF101790 290 373 1.55E-17 T 31-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DY252_08060 3ee149c4b068e5ce5704d9a26d7884a5 377 PIRSF PIRSF006487 1 377 1.7E-85 T 31-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DY252_08060 3ee149c4b068e5ce5704d9a26d7884a5 377 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 273 354 1.8E-9 T 31-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DY252_05465 74075dbbbd5e6f77948bfa1ba448e5f0 424 Gene3D G3DSA:3.90.1300.10 3 424 2.2E-100 T 31-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DY252_05465 74075dbbbd5e6f77948bfa1ba448e5f0 424 SUPERFAMILY SSF75304 23 422 5.1E-95 T 31-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DY252_05465 74075dbbbd5e6f77948bfa1ba448e5f0 424 Pfam PF01425 Amidase 26 413 1.1E-75 T 31-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DY252_00365 a54c27b6345d721e1521a3fcb7eb24aa 234 Gene3D G3DSA:2.130.10.10 3 89 1.3E-10 T 31-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DY252_00365 a54c27b6345d721e1521a3fcb7eb24aa 234 Gene3D G3DSA:2.130.10.10 98 234 2.5E-14 T 31-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DY252_00365 a54c27b6345d721e1521a3fcb7eb24aa 234 SUPERFAMILY SSF110296 5 232 2.35E-27 T 31-10-2018 DY252_00770 2a33f7eaf73f2dd5673c49ccc21bfe26 204 Gene3D G3DSA:3.40.30.10 26 203 6.8E-59 T 31-10-2018 DY252_00770 2a33f7eaf73f2dd5673c49ccc21bfe26 204 SUPERFAMILY SSF52833 38 201 2.77E-51 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_00770 2a33f7eaf73f2dd5673c49ccc21bfe26 204 Pfam PF02630 SCO1/SenC 13 185 9.1E-49 T 31-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_00530 ddffebfe00856e20d26fe4f158fb8a95 215 SUPERFAMILY SSF52980 22 129 1.9E-9 T 31-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DY252_00530 ddffebfe00856e20d26fe4f158fb8a95 215 Pfam PF08722 TnsA endonuclease N terminal 52 126 1.3E-12 T 31-10-2018 IPR014833 TnsA endonuclease, N-terminal DY252_06615 dfe59085c7737395d7cc82b566281e7b 158 Gene3D G3DSA:3.40.630.30 1 157 7.0E-26 T 31-10-2018 DY252_06615 dfe59085c7737395d7cc82b566281e7b 158 Pfam PF00583 Acetyltransferase (GNAT) family 44 138 2.0E-15 T 31-10-2018 IPR000182 GNAT domain DY252_06615 dfe59085c7737395d7cc82b566281e7b 158 SUPERFAMILY SSF55729 1 147 9.26E-25 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_11245 de02a204c520ebf1e26da1736d1b70d7 203 Gene3D G3DSA:3.90.79.10 1 202 5.3E-56 T 31-10-2018 DY252_11245 de02a204c520ebf1e26da1736d1b70d7 203 Pfam PF00293 NUDIX domain 44 164 8.0E-11 T 31-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DY252_11245 de02a204c520ebf1e26da1736d1b70d7 203 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 4 192 4.9E-44 T 31-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 DY252_11245 de02a204c520ebf1e26da1736d1b70d7 203 ProSitePatterns PS00893 Nudix box signature. 89 110 - T 31-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DY252_11245 de02a204c520ebf1e26da1736d1b70d7 203 SUPERFAMILY SSF55811 2 198 1.49E-39 T 31-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DY252_01755 111a39679aa9fedc9880f1dbc2a84071 329 Gene3D G3DSA:1.10.530.10 169 308 3.4E-15 T 31-10-2018 DY252_01755 111a39679aa9fedc9880f1dbc2a84071 329 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 172 300 3.8E-14 T 31-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 DY252_17400 f7b661cf62f8a4265dec840aede82efc 226 Gene3D G3DSA:3.40.190.10 102 176 4.7E-7 T 31-10-2018 DY252_17400 f7b661cf62f8a4265dec840aede82efc 226 SUPERFAMILY SSF53850 22 209 1.0E-12 T 31-10-2018 DY252_17400 f7b661cf62f8a4265dec840aede82efc 226 Gene3D G3DSA:3.40.190.10 42 101 4.7E-7 T 31-10-2018 DY252_10510 a2758b82f714593b2ac449f28ca1f936 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 2.3E-8 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_10510 a2758b82f714593b2ac449f28ca1f936 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 2.3E-8 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_10510 a2758b82f714593b2ac449f28ca1f936 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 58 1.7E-15 T 31-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DY252_10510 a2758b82f714593b2ac449f28ca1f936 206 SUPERFAMILY SSF48498 84 187 1.29E-6 T 31-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DY252_10510 a2758b82f714593b2ac449f28ca1f936 206 SUPERFAMILY SSF46689 2 70 1.2E-18 T 31-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DY252_10510 a2758b82f714593b2ac449f28ca1f936 206 Gene3D G3DSA:1.10.357.10 3 203 7.0E-33 T 31-10-2018 DY252_19175 46ddb47fc6d43bf2f08a3282dd03867a 259 SUPERFAMILY SSF52096 7 259 2.49E-66 T 31-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DY252_19175 46ddb47fc6d43bf2f08a3282dd03867a 259 Gene3D G3DSA:3.90.226.10 1 203 2.3E-60 T 31-10-2018 DY252_19175 46ddb47fc6d43bf2f08a3282dd03867a 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 259 5.6E-47 T 31-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DY252_19175 46ddb47fc6d43bf2f08a3282dd03867a 259 Gene3D G3DSA:1.10.12.10 204 259 1.1E-21 T 31-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DY252_01175 43f8d99de7ec0f87337877dae75a1d86 316 SUPERFAMILY SSF161098 73 298 6.8E-45 T 31-10-2018 IPR035906 MetI-like superfamily DY252_01175 43f8d99de7ec0f87337877dae75a1d86 316 Gene3D G3DSA:1.10.3720.10 69 310 5.6E-49 T 31-10-2018 IPR035906 MetI-like superfamily DY252_01175 43f8d99de7ec0f87337877dae75a1d86 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 300 2.6E-14 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_13810 f06af33847c62b889f2f2b87fcb6b29d 309 Gene3D G3DSA:3.20.20.70 1 309 1.2E-123 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_13810 f06af33847c62b889f2f2b87fcb6b29d 309 Pfam PF05853 beta-keto acid cleavage enzyme 4 301 3.0E-106 T 31-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 DY252_10075 87d0ac2cdc5819df89d6bb540c150748 153 SUPERFAMILY SSF54637 16 147 2.16E-36 T 31-10-2018 IPR029069 HotDog domain superfamily DY252_10075 87d0ac2cdc5819df89d6bb540c150748 153 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 24 131 3.1E-29 T 31-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 DY252_10075 87d0ac2cdc5819df89d6bb540c150748 153 Gene3D G3DSA:3.10.129.10 8 149 2.0E-36 T 31-10-2018 DY252_10075 87d0ac2cdc5819df89d6bb540c150748 153 PIRSF PIRSF003230 11 151 6.7E-40 T 31-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 DY252_10075 87d0ac2cdc5819df89d6bb540c150748 153 Pfam PF03061 Thioesterase superfamily 32 117 9.8E-19 T 31-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DY252_08375 90bcab3c0b40ee7cb0f94089c533f713 203 SUPERFAMILY SSF48452 33 150 7.59E-12 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_08375 90bcab3c0b40ee7cb0f94089c533f713 203 Gene3D G3DSA:1.25.40.10 13 156 1.8E-12 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_18400 fa0d0663c42cabcf52a6be98a65c2e65 340 SUPERFAMILY SSF55073 180 337 4.71E-41 T 31-10-2018 IPR029787 Nucleotide cyclase DY252_18400 fa0d0663c42cabcf52a6be98a65c2e65 340 Gene3D G3DSA:3.30.70.270 160 339 4.3E-50 T 31-10-2018 DY252_18400 fa0d0663c42cabcf52a6be98a65c2e65 340 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 174 338 5.3E-49 T 31-10-2018 IPR000160 GGDEF domain DY252_18400 fa0d0663c42cabcf52a6be98a65c2e65 340 SMART SM00267 164 340 7.3E-55 T 31-10-2018 IPR000160 GGDEF domain DY252_18400 fa0d0663c42cabcf52a6be98a65c2e65 340 Pfam PF00990 Diguanylate cyclase, GGDEF domain 176 336 4.6E-45 T 31-10-2018 IPR000160 GGDEF domain DY252_03025 9172f8fd91c800208c2d164542d0b956 103 SUPERFAMILY SSF54913 1 103 2.83E-16 T 31-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DY252_03025 9172f8fd91c800208c2d164542d0b956 103 Gene3D G3DSA:3.30.70.120 1 103 4.4E-23 T 31-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DY252_16725 60e9dac910817e7ecc1d3562e2e0dae8 141 SUPERFAMILY SSF159888 11 136 1.28E-7 T 31-10-2018 DY252_06025 c086d0a164a9723fdeeff81ff83bfae7 315 SUPERFAMILY SSF53822 29 305 2.98E-59 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_06025 c086d0a164a9723fdeeff81ff83bfae7 315 Gene3D G3DSA:3.40.50.2300 37 294 9.5E-70 T 31-10-2018 DY252_06025 c086d0a164a9723fdeeff81ff83bfae7 315 Pfam PF13407 Periplasmic binding protein domain 30 279 7.2E-53 T 31-10-2018 IPR025997 Periplasmic binding protein DY252_06025 c086d0a164a9723fdeeff81ff83bfae7 315 Gene3D G3DSA:3.40.50.2300 128 303 9.5E-70 T 31-10-2018 DY252_10205 b07bddf2b3531fa4be24dcf8a4da6e4d 313 Gene3D G3DSA:1.10.3720.10 25 312 2.1E-56 T 31-10-2018 IPR035906 MetI-like superfamily DY252_10205 b07bddf2b3531fa4be24dcf8a4da6e4d 313 SUPERFAMILY SSF161098 25 304 4.19E-57 T 31-10-2018 IPR035906 MetI-like superfamily DY252_10205 b07bddf2b3531fa4be24dcf8a4da6e4d 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 305 8.2E-20 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_13690 d14f3c73ff9a8f9be4f77db8203e40eb 197 Gene3D G3DSA:3.90.190.10 8 149 1.3E-13 T 31-10-2018 IPR029021 Protein-tyrosine phosphatase-like DY252_13690 d14f3c73ff9a8f9be4f77db8203e40eb 197 Pfam PF00782 Dual specificity phosphatase, catalytic domain 22 140 2.0E-5 T 31-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 DY252_13690 d14f3c73ff9a8f9be4f77db8203e40eb 197 SUPERFAMILY SSF52799 51 156 4.1E-14 T 31-10-2018 IPR029021 Protein-tyrosine phosphatase-like DY252_13690 d14f3c73ff9a8f9be4f77db8203e40eb 197 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 97 107 - T 31-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 DY252_17645 e216fd634d8f390bc356a0ff84b2702a 547 Gene3D G3DSA:3.30.750.140 393 508 2.1E-10 T 31-10-2018 IPR038610 FliK-like, C-terminal domain superfamily DY252_17645 e216fd634d8f390bc356a0ff84b2702a 547 Pfam PF02120 Flagellar hook-length control protein FliK 415 497 1.2E-16 T 31-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal DY252_16520 5bbe0d3d4cf084ed0a4073d1fe116c54 303 TIGRFAM TIGR04474 tcm_partner: three-Cys-motif partner protein 18 287 3.3E-57 T 31-10-2018 IPR031009 Three-Cys-motif partner protein DY252_04585 619dd77077feaba6152e3edeee2a6c96 134 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 99 4.4E-24 T 31-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 DY252_04585 619dd77077feaba6152e3edeee2a6c96 134 Pfam PF03334 Na+/H+ antiporter subunit 12 92 2.8E-24 T 31-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 DY252_18220 1aaeed7184ed11c0f5f65e9e90004786 265 SUPERFAMILY SSF56112 11 169 3.19E-12 T 31-10-2018 IPR011009 Protein kinase-like domain superfamily DY252_12965 393843aae8c29592abf6e1af924ff867 397 SUPERFAMILY SSF103473 14 391 2.49E-42 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_12965 393843aae8c29592abf6e1af924ff867 397 Gene3D G3DSA:1.20.1250.20 200 389 2.7E-16 T 31-10-2018 DY252_12965 393843aae8c29592abf6e1af924ff867 397 Pfam PF07690 Major Facilitator Superfamily 219 385 1.2E-9 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_12965 393843aae8c29592abf6e1af924ff867 397 Pfam PF07690 Major Facilitator Superfamily 14 196 6.9E-10 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_12965 393843aae8c29592abf6e1af924ff867 397 Gene3D G3DSA:1.20.1250.20 11 185 1.8E-16 T 31-10-2018 DY252_12225 ab27e303353698cae3aee9cf2f4032ef 281 Pfam PF00494 Squalene/phytoene synthase 14 259 1.8E-49 T 31-10-2018 DY252_12225 ab27e303353698cae3aee9cf2f4032ef 281 Gene3D G3DSA:1.10.600.10 4 258 2.3E-35 T 31-10-2018 IPR008949 Isoprenoid synthase domain superfamily DY252_12225 ab27e303353698cae3aee9cf2f4032ef 281 SUPERFAMILY SSF48576 7 280 3.16E-55 T 31-10-2018 IPR008949 Isoprenoid synthase domain superfamily DY252_19715 aeb6056eefc39b98472cf3a87401ab94 341 SUPERFAMILY SSF53335 182 276 2.54E-11 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_19715 aeb6056eefc39b98472cf3a87401ab94 341 Gene3D G3DSA:3.40.50.150 176 334 2.1E-38 T 31-10-2018 DY252_19715 aeb6056eefc39b98472cf3a87401ab94 341 Pfam PF01728 FtsJ-like methyltransferase 183 252 1.2E-5 T 31-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 DY252_11595 a06f921ba0da788a8c7cd22eb541afb2 124 Pfam PF04241 Protein of unknown function (DUF423) 18 105 8.9E-23 T 31-10-2018 IPR006696 Protein of unknown function DUF423 DY252_13985 640fa6986d3616922c05c1b834a599c3 463 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 451 7.6E-80 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_13985 640fa6986d3616922c05c1b834a599c3 463 PIRSF PIRSF006066 11 463 1.3E-67 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_09225 2aa022688af2f5f3d3651105d9c0eda2 306 SUPERFAMILY SSF103481 221 305 2.22E-5 T 31-10-2018 DY252_09225 2aa022688af2f5f3d3651105d9c0eda2 306 SUPERFAMILY SSF103481 52 153 6.93E-13 T 31-10-2018 DY252_12975 3f593eeb5e1584e00f5e047214934309 323 Gene3D G3DSA:3.40.50.1000 47 282 4.5E-48 T 31-10-2018 IPR023214 HAD superfamily DY252_12975 3f593eeb5e1584e00f5e047214934309 323 Gene3D G3DSA:3.40.50.1000 117 233 4.5E-48 T 31-10-2018 IPR023214 HAD superfamily DY252_12975 3f593eeb5e1584e00f5e047214934309 323 Pfam PF13344 Haloacid dehalogenase-like hydrolase 52 127 2.3E-14 T 31-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DY252_12975 3f593eeb5e1584e00f5e047214934309 323 SUPERFAMILY SSF56784 49 285 9.81E-39 T 31-10-2018 IPR036412 HAD-like superfamily DY252_12975 3f593eeb5e1584e00f5e047214934309 323 Pfam PF13242 HAD-hyrolase-like 231 283 3.0E-11 T 31-10-2018 DY252_21780 dbcb5464676b19f95566b0b3cdc46d14 160 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 151 4.0E-28 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_11865 c374ec95fc976a00c419359ff635eca8 398 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 88 156 3.5E-18 T 31-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DY252_11865 c374ec95fc976a00c419359ff635eca8 398 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 393 7.6E-14 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_11865 c374ec95fc976a00c419359ff635eca8 398 SUPERFAMILY SSF161098 90 379 9.0E-37 T 31-10-2018 IPR035906 MetI-like superfamily DY252_11865 c374ec95fc976a00c419359ff635eca8 398 Gene3D G3DSA:1.10.3720.10 76 181 2.2E-15 T 31-10-2018 IPR035906 MetI-like superfamily DY252_11865 c374ec95fc976a00c419359ff635eca8 398 Gene3D G3DSA:1.10.3720.10 186 395 2.1E-36 T 31-10-2018 IPR035906 MetI-like superfamily DY252_19000 ce32fb99267fd57f06949fdcabc89cc8 155 Pfam PF00583 Acetyltransferase (GNAT) family 47 133 1.7E-12 T 31-10-2018 IPR000182 GNAT domain DY252_19000 ce32fb99267fd57f06949fdcabc89cc8 155 SUPERFAMILY SSF55729 6 143 2.57E-29 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_19000 ce32fb99267fd57f06949fdcabc89cc8 155 Gene3D G3DSA:3.40.630.30 4 154 1.1E-29 T 31-10-2018 DY252_14240 519c4b8028cd09d0cea568f71d57bf67 213 Pfam PF01810 LysE type translocator 28 204 3.7E-16 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_09220 848a37a5ca2c6462cef46f75b91328c0 283 PIRSF PIRSF019271 4 280 9.7E-72 T 31-10-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 DY252_09220 848a37a5ca2c6462cef46f75b91328c0 283 Gene3D G3DSA:3.40.50.1000 21 282 7.3E-78 T 31-10-2018 IPR023214 HAD superfamily DY252_09220 848a37a5ca2c6462cef46f75b91328c0 283 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 39 251 6.2E-46 T 31-10-2018 IPR005519 Acid phosphatase, class B-like DY252_09220 848a37a5ca2c6462cef46f75b91328c0 283 SUPERFAMILY SSF56784 70 256 2.21E-36 T 31-10-2018 IPR036412 HAD-like superfamily DY252_15850 3715b29c614d930dae33731c554ce5d7 90 SUPERFAMILY SSF82771 27 81 3.92E-6 T 31-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DY252_15850 3715b29c614d930dae33731c554ce5d7 90 Pfam PF01541 GIY-YIG catalytic domain 23 82 4.1E-14 T 31-10-2018 IPR000305 GIY-YIG endonuclease DY252_15850 3715b29c614d930dae33731c554ce5d7 90 Gene3D G3DSA:3.40.1440.10 2 89 7.4E-20 T 31-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DY252_06605 ab89543c9dbce4e1fe336ca3a9b37e7f 558 PIRSF PIRSF006429 6 543 3.3E-165 T 31-10-2018 IPR024188 Glutamate synthase large subunit-like protein DY252_06605 ab89543c9dbce4e1fe336ca3a9b37e7f 558 PIRSF PIRSF500060 13 535 1.4E-223 T 31-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria DY252_06605 ab89543c9dbce4e1fe336ca3a9b37e7f 558 Pfam PF01645 Conserved region in glutamate synthase 162 476 9.2E-83 T 31-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 DY252_06605 ab89543c9dbce4e1fe336ca3a9b37e7f 558 SUPERFAMILY SSF51395 18 493 7.85E-134 T 31-10-2018 DY252_06605 ab89543c9dbce4e1fe336ca3a9b37e7f 558 Gene3D G3DSA:3.20.20.70 156 501 1.9E-107 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_06120 3a5a4ac01e44ffccf8b0da6404b80b51 365 Pfam PF02653 Branched-chain amino acid transport system / permease component 48 351 4.8E-56 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_06985 3846891ccfdfaa457959c74bacf8d4a9 397 SUPERFAMILY SSF103473 11 383 2.75E-56 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_06985 3846891ccfdfaa457959c74bacf8d4a9 397 Pfam PF07690 Major Facilitator Superfamily 18 315 1.6E-32 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_06985 3846891ccfdfaa457959c74bacf8d4a9 397 Gene3D G3DSA:1.20.1250.20 8 384 3.0E-44 T 31-10-2018 DY252_10080 1339bdf7fdbf34d4c4e7330a8b5cf40e 243 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 20 241 39.341 T 31-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 DY252_10080 1339bdf7fdbf34d4c4e7330a8b5cf40e 243 TIGRFAM TIGR02796 tolQ: protein TolQ 21 236 1.5E-85 T 31-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 DY252_10080 1339bdf7fdbf34d4c4e7330a8b5cf40e 243 Pfam PF01618 MotA/TolQ/ExbB proton channel family 91 224 4.2E-41 T 31-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DY252_04645 06e82da681a3d9565bb6c1d40785db0f 267 Gene3D G3DSA:3.60.21.10 6 259 1.3E-17 T 31-10-2018 IPR029052 Metallo-dependent phosphatase-like DY252_04645 06e82da681a3d9565bb6c1d40785db0f 267 SUPERFAMILY SSF56300 11 256 4.49E-8 T 31-10-2018 DY252_10480 295f98ae1af4bcbe7e8190b812f7e38c 305 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 9.4E-17 T 31-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DY252_10480 295f98ae1af4bcbe7e8190b812f7e38c 305 SUPERFAMILY SSF51735 1 297 2.98E-42 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_10480 295f98ae1af4bcbe7e8190b812f7e38c 305 Gene3D G3DSA:3.40.50.720 1 303 1.4E-38 T 31-10-2018 DY252_04535 16155733ec35233470fc0af5b90ee277 414 Gene3D G3DSA:3.40.50.2300 152 386 3.8E-91 T 31-10-2018 DY252_04535 16155733ec35233470fc0af5b90ee277 414 SUPERFAMILY SSF53822 27 396 2.12E-47 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_04535 16155733ec35233470fc0af5b90ee277 414 Gene3D G3DSA:3.40.50.2300 29 381 3.8E-91 T 31-10-2018 DY252_04535 16155733ec35233470fc0af5b90ee277 414 Pfam PF13458 Periplasmic binding protein 27 388 2.5E-58 T 31-10-2018 IPR028081 Leucine-binding protein domain DY252_14220 87b29debb321a03ef76d3696d178f1df 190 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 32 161 2.0E-27 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_12980 0a7be1cc047eb7d4d02e64baa146e24f 52 Pfam PF06568 Domain of unknown function (DUF1127) 7 41 1.4E-9 T 31-10-2018 IPR009506 Protein of unknown function DUF1127 DY252_11315 5c8cbee2265881f065d910464465c562 83 Gene3D G3DSA:3.30.110.40 2 82 4.6E-30 T 31-10-2018 IPR036868 TusA-like domain superfamily DY252_11315 5c8cbee2265881f065d910464465c562 83 Pfam PF01206 Sulfurtransferase TusA 12 80 8.0E-24 T 31-10-2018 IPR001455 TusA-like domain DY252_11315 5c8cbee2265881f065d910464465c562 83 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 13 37 - T 31-10-2018 IPR001455 TusA-like domain DY252_11315 5c8cbee2265881f065d910464465c562 83 SUPERFAMILY SSF64307 9 80 1.44E-25 T 31-10-2018 IPR036868 TusA-like domain superfamily DY252_08220 8f14b476281bb9dbf9e3e0b9457082fd 171 Gene3D G3DSA:1.20.1260.100 16 171 3.1E-51 T 31-10-2018 IPR038330 TspO/MBR-related superfamily DY252_08220 8f14b476281bb9dbf9e3e0b9457082fd 171 Pfam PF03073 TspO/MBR family 25 167 1.8E-45 T 31-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 DY252_08220 8f14b476281bb9dbf9e3e0b9457082fd 171 PIRSF PIRSF005859 14 171 3.7E-49 T 31-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 DY252_11810 9812f38001447b3b695935173dfcfd11 331 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 27 315 1.0E-63 T 31-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 DY252_11810 9812f38001447b3b695935173dfcfd11 331 Gene3D G3DSA:3.40.50.2300 126 317 5.6E-99 T 31-10-2018 DY252_11810 9812f38001447b3b695935173dfcfd11 331 SUPERFAMILY SSF53822 36 269 2.51E-16 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_11810 9812f38001447b3b695935173dfcfd11 331 Gene3D G3DSA:3.40.50.2300 27 282 5.6E-99 T 31-10-2018 DY252_10305 3d0c91b348cf12e0af78e8dbe98f40b9 688 Pfam PF14022 Protein of unknown function (DUF4238) 5 161 7.8E-13 T 31-10-2018 IPR025332 Protein of unknown function DUF4238 DY252_17100 93822fa90bdc7c2b07ca0b66029ddba9 152 Pfam PF02082 Transcriptional regulator 1 81 2.6E-21 T 31-10-2018 IPR000944 Transcription regulator Rrf2-type DY252_17100 93822fa90bdc7c2b07ca0b66029ddba9 152 SUPERFAMILY SSF46785 6 132 4.93E-30 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_17100 93822fa90bdc7c2b07ca0b66029ddba9 152 Gene3D G3DSA:1.10.10.10 2 144 6.9E-38 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_16315 4f2eede2121edbf508a1ef581ff09d69 330 PIRSF PIRSF006470 1 330 1.5E-90 T 31-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DY252_16315 4f2eede2121edbf508a1ef581ff09d69 330 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 38 282 2.9E-62 T 31-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DY252_16315 4f2eede2121edbf508a1ef581ff09d69 330 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 312 1.5E-84 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_16315 4f2eede2121edbf508a1ef581ff09d69 330 Gene3D G3DSA:3.40.190.170 28 329 5.0E-112 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_02390 b3f6714bee6556c4bac2b9af5df08d56 48 Pfam PF07896 Protein of unknown function (DUF1674) 12 48 1.6E-17 T 31-10-2018 IPR012875 Protein of unknown function DUF1674 DY252_17285 b7204974bf3718eb85c8e8c318ada3cf 362 Gene3D G3DSA:3.40.190.10 142 267 1.1E-43 T 31-10-2018 DY252_17285 b7204974bf3718eb85c8e8c318ada3cf 362 SUPERFAMILY SSF53850 36 361 1.84E-54 T 31-10-2018 DY252_17285 b7204974bf3718eb85c8e8c318ada3cf 362 Gene3D G3DSA:3.40.190.10 42 321 1.1E-43 T 31-10-2018 DY252_17285 b7204974bf3718eb85c8e8c318ada3cf 362 Pfam PF13416 Bacterial extracellular solute-binding protein 50 320 6.4E-28 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_12235 faa8291cd875ce49cac32228720cc598 448 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 6 443 4.6E-174 T 31-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 DY252_12235 faa8291cd875ce49cac32228720cc598 448 Gene3D G3DSA:3.50.50.60 4 183 7.5E-49 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_12235 faa8291cd875ce49cac32228720cc598 448 Gene3D G3DSA:3.50.50.60 297 448 1.5E-42 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_12235 faa8291cd875ce49cac32228720cc598 448 SUPERFAMILY SSF51905 5 370 4.21E-26 T 31-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DY252_12235 faa8291cd875ce49cac32228720cc598 448 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 7 444 35.362 T 31-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 DY252_12235 faa8291cd875ce49cac32228720cc598 448 Pfam PF01134 Glucose inhibited division protein A 7 375 1.1E-111 T 31-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 DY252_19020 002099cda2ced643723b36f894f9f199 253 Gene3D G3DSA:3.40.50.300 2 250 4.1E-63 T 31-10-2018 DY252_19020 002099cda2ced643723b36f894f9f199 253 Pfam PF00005 ABC transporter 21 179 5.1E-31 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_19020 002099cda2ced643723b36f894f9f199 253 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 228 249 2.4E-12 T 31-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DY252_19020 002099cda2ced643723b36f894f9f199 253 SMART SM00382 30 227 0.0019 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_19020 002099cda2ced643723b36f894f9f199 253 SUPERFAMILY SSF52540 4 248 2.49E-62 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18160 ce5dc7e7ec1f6312955acb638bf2348f 235 Gene3D G3DSA:3.40.50.150 62 230 8.3E-21 T 31-10-2018 DY252_18160 ce5dc7e7ec1f6312955acb638bf2348f 235 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 89 161 2.4E-12 T 31-10-2018 DY252_18160 ce5dc7e7ec1f6312955acb638bf2348f 235 SUPERFAMILY SSF53335 61 198 4.22E-21 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_18830 81886edee2ed23569052d996ddc410eb 162 SUPERFAMILY SSF54593 7 137 1.48E-19 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_18830 81886edee2ed23569052d996ddc410eb 162 Gene3D G3DSA:3.10.180.10 9 137 6.8E-18 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_18830 81886edee2ed23569052d996ddc410eb 162 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 133 1.8E-10 T 31-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DY252_06610 f51eb10556900eb000a20c9eb6dcef58 85 Hamap MF_00827 UPF0386 protein YjhX [yjhX]. 1 85 27.865 T 31-10-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair DY252_06610 f51eb10556900eb000a20c9eb6dcef58 85 Pfam PF09857 Putative toxin of bacterial toxin-antitoxin pair 1 84 4.5E-38 T 31-10-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair DY252_10610 cd419fa272c80b1e90d33d6429d46c34 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 21 399 7.1E-79 T 31-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DY252_10610 cd419fa272c80b1e90d33d6429d46c34 445 Pfam PF01554 MatE 21 181 2.8E-25 T 31-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DY252_10610 cd419fa272c80b1e90d33d6429d46c34 445 Pfam PF01554 MatE 247 402 1.8E-16 T 31-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DY252_02085 1d488ed1d9139f32fcaffc70827db64b 400 Pfam PF10082 Putative beta-barrel porin 2 27 399 3.7E-94 T 31-10-2018 IPR018759 Putative beta-barrel porin 2 DY252_18760 c5eeaa2b05dbd53c3fb477fa71b08c08 379 Pfam PF13469 Sulfotransferase family 58 218 5.4E-13 T 31-10-2018 DY252_18760 c5eeaa2b05dbd53c3fb477fa71b08c08 379 SUPERFAMILY SSF52540 55 375 7.21E-30 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_09815 dc14ffbeea71c90253a0776a4239419f 189 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 21 151 3.4E-29 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_17885 6ecc98ed712567fd2e9556bdd9d8f9e1 218 Pfam PF01810 LysE type translocator 23 217 8.0E-25 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_15685 2c3c08ff63f53843600824f5b145087f 107 Pfam PF11747 Killing trait 11 78 7.7E-29 T 31-10-2018 IPR021070 Killing trait, RebB DY252_02190 13f37bfa92aca9120edd6ce63915655c 277 Pfam PF01925 Sulfite exporter TauE/SafE 19 271 1.7E-53 T 31-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DY252_09805 08f40bfa2a8064bbc6b06a7115e9518c 170 SUPERFAMILY SSF109854 10 147 5.34E-29 T 31-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DY252_09805 08f40bfa2a8064bbc6b06a7115e9518c 170 Gene3D G3DSA:1.20.120.450 6 163 2.0E-32 T 31-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DY252_09805 08f40bfa2a8064bbc6b06a7115e9518c 170 Pfam PF05163 DinB family 11 164 3.2E-22 T 31-10-2018 IPR007837 DNA damage-inducible protein DinB DY252_00405 d725abc7771ce2f991154dec5b1966aa 149 Pfam PF04314 Copper chaperone PCu(A)C 26 132 2.8E-30 T 31-10-2018 IPR007410 Copper chaperone PCuAC DY252_00405 d725abc7771ce2f991154dec5b1966aa 149 Gene3D G3DSA:2.60.40.1890 29 138 1.6E-29 T 31-10-2018 IPR036182 Copper chaperone PCuAC superfamily DY252_00405 d725abc7771ce2f991154dec5b1966aa 149 SUPERFAMILY SSF110087 4 138 4.18E-36 T 31-10-2018 IPR036182 Copper chaperone PCuAC superfamily DY252_05160 70db4049160359498092f5b67e75b037 279 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 278 2.3E-11 T 31-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DY252_05160 70db4049160359498092f5b67e75b037 279 Gene3D G3DSA:3.40.190.10 51 271 1.8E-11 T 31-10-2018 DY252_05160 70db4049160359498092f5b67e75b037 279 SUPERFAMILY SSF53850 43 278 1.36E-21 T 31-10-2018 DY252_05160 70db4049160359498092f5b67e75b037 279 Gene3D G3DSA:3.40.190.10 126 231 1.8E-11 T 31-10-2018 DY252_01330 f3852781dadebb5a985159cde09c6f56 315 SUPERFAMILY SSF52283 35 129 5.35E-6 T 31-10-2018 DY252_01330 f3852781dadebb5a985159cde09c6f56 315 Gene3D G3DSA:3.40.50.720 99 281 9.5E-108 T 31-10-2018 DY252_01330 f3852781dadebb5a985159cde09c6f56 315 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 280 7.3E-45 T 31-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DY252_01330 f3852781dadebb5a985159cde09c6f56 315 Gene3D G3DSA:3.40.50.720 21 315 9.5E-108 T 31-10-2018 DY252_01330 f3852781dadebb5a985159cde09c6f56 315 SUPERFAMILY SSF51735 102 281 1.2E-45 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_00375 5df1565547e646e2a0040008949889e6 161 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 46 138 5.7E-11 T 31-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_00375 5df1565547e646e2a0040008949889e6 161 Gene3D G3DSA:1.10.760.10 27 149 1.3E-17 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_00375 5df1565547e646e2a0040008949889e6 161 SUPERFAMILY SSF46626 31 145 3.51E-20 T 31-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DY252_18045 e156b3e19e6f10e097c08b925848f382 478 Pfam PF04773 FecR protein 82 165 6.1E-6 T 31-10-2018 IPR006860 FecR protein DY252_05000 669dbe69fa9aab1bd15b63b178854757 246 Gene3D G3DSA:3.90.1140.10 59 240 1.5E-6 T 31-10-2018 DY252_17515 d71937174cbb192496b5074ff78d6f51 213 Gene3D G3DSA:1.10.287.500 110 165 3.6E-5 T 31-10-2018 DY252_17515 d71937174cbb192496b5074ff78d6f51 213 SUPERFAMILY SSF75708 46 213 1.44E-35 T 31-10-2018 DY252_17515 d71937174cbb192496b5074ff78d6f51 213 Pfam PF04344 Chemotaxis phosphatase, CheZ 122 210 1.7E-7 T 31-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 DY252_11975 4ea56158a5862aaa8a84730bf6fc90d6 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 34.278 T 31-10-2018 IPR005583 Peroxide stress protein YaaA DY252_11975 4ea56158a5862aaa8a84730bf6fc90d6 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 1.6E-85 T 31-10-2018 IPR005583 Peroxide stress protein YaaA DY252_08625 6afd4169c9679c45b1e72f07799b11e3 128 SUPERFAMILY SSF55298 17 126 8.64E-31 T 31-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DY252_08625 6afd4169c9679c45b1e72f07799b11e3 128 Pfam PF01042 Endoribonuclease L-PSP 19 124 1.2E-22 T 31-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DY252_08625 6afd4169c9679c45b1e72f07799b11e3 128 Gene3D G3DSA:3.30.1330.40 10 125 4.6E-30 T 31-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DY252_04455 d02cac89bb851c64d51d05db98c5890b 178 SUPERFAMILY SSF52833 41 175 3.93E-33 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_04455 d02cac89bb851c64d51d05db98c5890b 178 Gene3D G3DSA:3.40.30.10 23 177 1.8E-36 T 31-10-2018 DY252_04455 d02cac89bb851c64d51d05db98c5890b 178 ProSitePatterns PS00194 Thioredoxin family active site. 67 85 - T 31-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DY252_04455 d02cac89bb851c64d51d05db98c5890b 178 Pfam PF08534 Redoxin 38 167 3.3E-13 T 31-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DY252_04455 d02cac89bb851c64d51d05db98c5890b 178 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 7 173 5.9E-53 T 31-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 DY252_12320 f8660939694620d9390c126b84bf930e 290 Pfam PF04367 Protein of unknown function (DUF502) 90 195 3.1E-38 T 31-10-2018 IPR007462 Protein of unknown function DUF502 DY252_17725 d2501472b2b2c9dad35286be2e8145fa 413 Gene3D G3DSA:3.40.190.10 73 352 2.2E-15 T 31-10-2018 DY252_17725 d2501472b2b2c9dad35286be2e8145fa 413 Gene3D G3DSA:3.40.190.10 169 313 2.2E-15 T 31-10-2018 DY252_17725 d2501472b2b2c9dad35286be2e8145fa 413 PIRSF PIRSF029172 4 412 1.2E-159 T 31-10-2018 IPR027020 Protein ynjB DY252_17725 d2501472b2b2c9dad35286be2e8145fa 413 Pfam PF13416 Bacterial extracellular solute-binding protein 71 344 1.1E-21 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_17725 d2501472b2b2c9dad35286be2e8145fa 413 SUPERFAMILY SSF53850 47 409 5.02E-39 T 31-10-2018 DY252_17965 4e16f4b1e9d7fc8258a92d877fbb5795 188 Pfam PF01205 Uncharacterized protein family UPF0029 15 117 5.8E-24 T 31-10-2018 IPR001498 Impact, N-terminal DY252_17965 4e16f4b1e9d7fc8258a92d877fbb5795 188 Gene3D G3DSA:3.30.230.30 1 126 5.2E-39 T 31-10-2018 IPR036956 Impact, N-terminal domain superfamily DY252_17965 4e16f4b1e9d7fc8258a92d877fbb5795 188 SUPERFAMILY SSF54211 2 127 1.37E-35 T 31-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DY252_06035 d06fb3a92c6d62f902560f41d880d5b1 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 300 1.4E-47 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_07225 3f68b6e6fdd185e004a1fa79435eb33b 637 Pfam PF05787 Bacterial protein of unknown function (DUF839) 67 598 1.2E-178 T 31-10-2018 IPR008557 Protein of unknown function DUF839 DY252_07225 3f68b6e6fdd185e004a1fa79435eb33b 637 SUPERFAMILY SSF63829 312 599 1.41E-5 T 31-10-2018 DY252_15805 9af4d555454903992ef2960eab742cb4 405 Gene3D G3DSA:3.90.1150.10 21 397 1.3E-128 T 31-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DY252_15805 9af4d555454903992ef2960eab742cb4 405 Gene3D G3DSA:3.40.640.10 70 293 1.3E-128 T 31-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DY252_15805 9af4d555454903992ef2960eab742cb4 405 Pfam PF00155 Aminotransferase class I and II 63 395 6.8E-30 T 31-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DY252_15805 9af4d555454903992ef2960eab742cb4 405 SUPERFAMILY SSF53383 13 400 5.01E-95 T 31-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DY252_04175 9d37993623aa229a508a0d4eec9aa8d6 302 SMART SM00382 36 219 6.9E-18 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_04175 9d37993623aa229a508a0d4eec9aa8d6 302 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 28 257 4.6E-95 T 31-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 DY252_04175 9d37993623aa229a508a0d4eec9aa8d6 302 Pfam PF00005 ABC transporter 28 169 8.8E-31 T 31-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DY252_04175 9d37993623aa229a508a0d4eec9aa8d6 302 Gene3D G3DSA:3.40.50.300 4 256 3.6E-62 T 31-10-2018 DY252_04175 9d37993623aa229a508a0d4eec9aa8d6 302 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 31-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DY252_04175 9d37993623aa229a508a0d4eec9aa8d6 302 SUPERFAMILY SSF52540 6 229 1.93E-66 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_16220 d4d29a012e9ad6d2c8043d0436b2ff78 137 Pfam PF12903 Protein of unknown function (DUF3830) 6 136 2.2E-30 T 31-10-2018 IPR024532 Protein of unknown function DUF3830 DY252_16220 d4d29a012e9ad6d2c8043d0436b2ff78 137 Gene3D G3DSA:2.40.100.20 2 137 4.0E-39 T 31-10-2018 DY252_20965 91e8cec7b1e0b4d736dd4fee119e1985 331 Gene3D G3DSA:3.40.50.300 123 325 4.0E-49 T 31-10-2018 DY252_20965 91e8cec7b1e0b4d736dd4fee119e1985 331 SUPERFAMILY SSF52540 27 288 9.36E-34 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_20965 91e8cec7b1e0b4d736dd4fee119e1985 331 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 13 314 3.5E-130 T 31-10-2018 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 DY252_20965 91e8cec7b1e0b4d736dd4fee119e1985 331 Pfam PF00437 Type II/IV secretion system protein 28 291 5.9E-82 T 31-10-2018 IPR001482 Type II/IV secretion system protein DY252_20965 91e8cec7b1e0b4d736dd4fee119e1985 331 Gene3D G3DSA:3.30.450.90 18 122 3.0E-12 T 31-10-2018 DY252_05990 3a32ea76959f121fa19e24693cf8dd07 648 Hamap MF_00716 Nitrous-oxide reductase [nosZ]. 2 646 57.34 T 31-10-2018 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084 DY252_05990 3a32ea76959f121fa19e24693cf8dd07 648 Gene3D G3DSA:2.130.10.10 60 525 2.9E-198 T 31-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DY252_05990 3a32ea76959f121fa19e24693cf8dd07 648 SUPERFAMILY SSF50974 61 514 8.89E-143 T 31-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 DY252_05990 3a32ea76959f121fa19e24693cf8dd07 648 SUPERFAMILY SSF49503 517 646 6.04E-34 T 31-10-2018 IPR008972 Cupredoxin DY252_05990 3a32ea76959f121fa19e24693cf8dd07 648 TIGRFAM TIGR04244 nitrous_NosZ_RR: nitrous-oxide reductase, TAT-dependent 10 645 0.0 T 31-10-2018 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084 DY252_05990 3a32ea76959f121fa19e24693cf8dd07 648 Gene3D G3DSA:2.60.40.420 526 648 2.9E-35 T 31-10-2018 IPR008972 Cupredoxin DY252_21580 03fac052ad1e74b3d7e20fb1d98d48c2 238 Gene3D G3DSA:2.40.50.90 45 180 3.0E-6 T 31-10-2018 IPR035437 SNase-like, OB-fold superfamily DY252_21580 03fac052ad1e74b3d7e20fb1d98d48c2 238 SUPERFAMILY SSF50199 49 178 9.02E-12 T 31-10-2018 DY252_09620 899c44c643673c8c2b0c769702e561c9 142 Pfam PF03928 Haem-degrading 7 133 7.5E-32 T 31-10-2018 IPR005624 Haem-degrading DY252_09620 899c44c643673c8c2b0c769702e561c9 142 SUPERFAMILY SSF143744 1 137 2.22E-38 T 31-10-2018 IPR038084 GlcG-like domain superfamily DY252_09620 899c44c643673c8c2b0c769702e561c9 142 Gene3D G3DSA:3.30.450.150 2 139 1.7E-45 T 31-10-2018 IPR038084 GlcG-like domain superfamily DY252_03180 e09b365db86f194c1d1500e40810ed4a 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 280 5.2E-32 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_14780 a1b56ffcfc81e08583eecb166e5c4864 239 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 5 173 3.3E-68 T 31-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DY252_14780 a1b56ffcfc81e08583eecb166e5c4864 239 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 6.5E-5 T 31-10-2018 IPR001451 Hexapeptide repeat DY252_14780 a1b56ffcfc81e08583eecb166e5c4864 239 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 158 0.0014 T 31-10-2018 IPR001451 Hexapeptide repeat DY252_14780 a1b56ffcfc81e08583eecb166e5c4864 239 Gene3D G3DSA:2.160.10.10 67 186 2.8E-33 T 31-10-2018 DY252_14780 a1b56ffcfc81e08583eecb166e5c4864 239 SUPERFAMILY SSF51161 4 181 1.8E-52 T 31-10-2018 IPR011004 Trimeric LpxA-like superfamily DY252_14780 a1b56ffcfc81e08583eecb166e5c4864 239 Gene3D G3DSA:1.10.3130.10 1 66 3.6E-22 T 31-10-2018 DY252_14780 a1b56ffcfc81e08583eecb166e5c4864 239 PIRSF PIRSF000441 1 232 3.5E-78 T 31-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DY252_07755 4569f84f63fe427a4072e8587328f029 83 Pfam PF10038 Protein of unknown function (DUF2274) 2 67 7.1E-26 T 31-10-2018 IPR018733 Protein of unknown function DUF2274 DY252_15915 588d7b7cc4bcdcc2bcc8974d60af12d4 223 Pfam PF04191 Phospholipid methyltransferase 87 155 1.1E-9 T 31-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 DY252_15915 588d7b7cc4bcdcc2bcc8974d60af12d4 223 Gene3D G3DSA:1.20.120.1630 16 171 1.4E-22 T 31-10-2018 DY252_12685 b6a8d1921809b0a781cf8f71d44a404a 124 Gene3D G3DSA:3.40.30.10 29 122 5.7E-27 T 31-10-2018 DY252_12685 b6a8d1921809b0a781cf8f71d44a404a 124 SUPERFAMILY SSF52833 32 121 4.75E-7 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_20175 e718d599f864abccca3b825c6c768151 256 Gene3D G3DSA:3.40.50.300 51 256 9.0E-69 T 31-10-2018 DY252_20175 e718d599f864abccca3b825c6c768151 256 Pfam PF02562 PhoH-like protein 55 254 2.2E-81 T 31-10-2018 IPR003714 PhoH-like protein GO:0005524 DY252_20175 e718d599f864abccca3b825c6c768151 256 SUPERFAMILY SSF52540 54 232 6.68E-34 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_18170 6353fedb37f7aa9c204da12a84c35f71 118 Gene3D G3DSA:3.30.70.2400 2 59 1.2E-17 T 31-10-2018 DY252_18170 6353fedb37f7aa9c204da12a84c35f71 118 Gene3D G3DSA:3.30.70.2400 60 118 1.4E-17 T 31-10-2018 DY252_08580 c057c2e20807872509414c24c3a41b66 184 Pfam PF11188 Protein of unknown function (DUF2975) 57 180 1.8E-13 T 31-10-2018 IPR021354 Protein of unknown function DUF2975 DY252_15410 07ccdae44ee1c107e039983fb14a0e13 240 Pfam PF05275 Copper resistance protein B precursor (CopB) 31 240 5.9E-67 T 31-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 DY252_15220 8f8ac47c3acdc953f829e7511c19d946 263 SUPERFAMILY SSF51735 2 251 5.79E-56 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_15220 8f8ac47c3acdc953f829e7511c19d946 263 Gene3D G3DSA:3.40.50.720 1 254 7.8E-57 T 31-10-2018 DY252_15220 8f8ac47c3acdc953f829e7511c19d946 263 Pfam PF00106 short chain dehydrogenase 7 193 7.1E-41 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15220 8f8ac47c3acdc953f829e7511c19d946 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.0E-20 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15220 8f8ac47c3acdc953f829e7511c19d946 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.0E-20 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15220 8f8ac47c3acdc953f829e7511c19d946 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.0E-20 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15220 8f8ac47c3acdc953f829e7511c19d946 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.0E-20 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_15220 8f8ac47c3acdc953f829e7511c19d946 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.0E-20 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_04435 fd99f1725dac3ea3301538138763f149 617 Gene3D G3DSA:1.25.40.10 71 410 8.1E-7 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_04435 fd99f1725dac3ea3301538138763f149 617 Pfam PF01464 Transglycosylase SLT domain 444 548 6.4E-23 T 31-10-2018 IPR008258 Transglycosylase SLT domain 1 DY252_04435 fd99f1725dac3ea3301538138763f149 617 Gene3D G3DSA:1.10.530.10 443 593 3.3E-38 T 31-10-2018 DY252_04435 fd99f1725dac3ea3301538138763f149 617 SUPERFAMILY SSF53955 446 594 2.19E-37 T 31-10-2018 IPR023346 Lysozyme-like domain superfamily DY252_04435 fd99f1725dac3ea3301538138763f149 617 SUPERFAMILY SSF48435 66 415 1.31E-18 T 31-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 DY252_14760 d3b31d979012ab1188f88bb46cb75c65 134 Gene3D G3DSA:3.90.1010.10 1 132 6.8E-58 T 31-10-2018 DY252_14760 d3b31d979012ab1188f88bb46cb75c65 134 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.1E-67 T 31-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 DY252_14760 d3b31d979012ab1188f88bb46cb75c65 134 Pfam PF01592 NifU-like N terminal domain 2 126 8.4E-55 T 31-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 DY252_14760 d3b31d979012ab1188f88bb46cb75c65 134 SUPERFAMILY SSF82649 1 127 1.05E-46 T 31-10-2018 DY252_10680 2b744811273f4910cf265f3ed023186e 355 SUPERFAMILY SSF161098 113 337 3.79E-20 T 31-10-2018 IPR035906 MetI-like superfamily DY252_10680 2b744811273f4910cf265f3ed023186e 355 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 133 354 1.2E-40 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_09785 cbb63d88b3a904e5554fe400f71be1d0 574 Pfam PF00916 Sulfate permease family 37 400 2.8E-78 T 31-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 DY252_09785 cbb63d88b3a904e5554fe400f71be1d0 574 Pfam PF01740 STAS domain 463 547 1.5E-12 T 31-10-2018 IPR002645 STAS domain DY252_09785 cbb63d88b3a904e5554fe400f71be1d0 574 SUPERFAMILY SSF52091 463 566 4.51E-18 T 31-10-2018 IPR036513 STAS domain superfamily DY252_09785 cbb63d88b3a904e5554fe400f71be1d0 574 Gene3D G3DSA:3.30.750.24 449 569 1.2E-20 T 31-10-2018 IPR036513 STAS domain superfamily DY252_18855 e7171981d98803c232692eb02e36084d 448 SUPERFAMILY SSF53850 26 443 2.48E-47 T 31-10-2018 DY252_18855 e7171981d98803c232692eb02e36084d 448 Gene3D G3DSA:3.40.190.10 19 447 4.2E-50 T 31-10-2018 DY252_18855 e7171981d98803c232692eb02e36084d 448 Pfam PF13416 Bacterial extracellular solute-binding protein 44 365 1.4E-21 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_07125 ff96841322f587c17f1cc1b49dcbabbc 307 SUPERFAMILY SSF161098 89 292 3.27E-19 T 31-10-2018 IPR035906 MetI-like superfamily DY252_07125 ff96841322f587c17f1cc1b49dcbabbc 307 Gene3D G3DSA:1.10.3720.10 84 299 4.8E-22 T 31-10-2018 IPR035906 MetI-like superfamily DY252_07125 ff96841322f587c17f1cc1b49dcbabbc 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 305 5.4E-37 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_05815 e3e7abf1f12fa9d8a65ff91c8796df18 269 SUPERFAMILY SSF52540 59 182 2.28E-8 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_05815 e3e7abf1f12fa9d8a65ff91c8796df18 269 Gene3D G3DSA:3.40.50.300 58 182 9.9E-13 T 31-10-2018 DY252_06725 83446fe8beaa599998431619483f1d22 867 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 401 673 1.2E-28 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_06725 83446fe8beaa599998431619483f1d22 867 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 140 387 1.3E-50 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_06725 83446fe8beaa599998431619483f1d22 867 Pfam PF11874 Domain of unknown function (DUF3394) 681 859 1.1E-68 T 31-10-2018 IPR021814 Protein of unknown function DUF3394 DY252_06725 83446fe8beaa599998431619483f1d22 867 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 36 732 6.5E-208 T 31-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ DY252_19125 d79557846fba4638a947c1f419e02266 173 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 159 5.2E-17 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_19655 a985a715129f1296d49427065897766c 203 Pfam PF05258 Protein of unknown function (DUF721) 50 138 2.8E-16 T 31-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 DY252_19655 a985a715129f1296d49427065897766c 203 PIRSF PIRSF032064 18 193 2.7E-31 T 31-10-2018 IPR010593 Protein of unknown function DUF1159 DY252_05930 7fcd87d35f0b311b67196f1e2883e71f 101 Gene3D G3DSA:1.20.1290.10 1 100 4.7E-15 T 31-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DY252_05930 7fcd87d35f0b311b67196f1e2883e71f 101 Pfam PF02627 Carboxymuconolactone decarboxylase family 17 99 7.5E-11 T 31-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DY252_05930 7fcd87d35f0b311b67196f1e2883e71f 101 SUPERFAMILY SSF69118 4 100 1.44E-17 T 31-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DY252_00105 90f261b7a717e19d68736ed063142ace 440 Gene3D G3DSA:3.40.50.2000 3 228 3.3E-16 T 31-10-2018 DY252_00105 90f261b7a717e19d68736ed063142ace 440 Pfam PF13439 Glycosyltransferase Family 4 21 225 2.3E-15 T 31-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DY252_00105 90f261b7a717e19d68736ed063142ace 440 SUPERFAMILY SSF53756 8 422 2.89E-61 T 31-10-2018 DY252_00105 90f261b7a717e19d68736ed063142ace 440 Gene3D G3DSA:3.40.50.2000 229 401 1.3E-33 T 31-10-2018 DY252_00105 90f261b7a717e19d68736ed063142ace 440 Pfam PF00534 Glycosyl transferases group 1 235 398 1.9E-23 T 31-10-2018 IPR001296 Glycosyl transferase, family 1 DY252_07620 b468c0cf864d1cf957dadbe36b865156 432 TIGRFAM TIGR00937 2A51: chromate efflux transporter 22 373 4.9E-67 T 31-10-2018 IPR014047 Chromate transporter, long chain DY252_07620 b468c0cf864d1cf957dadbe36b865156 432 PIRSF PIRSF004810 3 431 6.1E-120 T 31-10-2018 IPR014047 Chromate transporter, long chain DY252_07620 b468c0cf864d1cf957dadbe36b865156 432 Pfam PF02417 Chromate transporter 18 178 9.8E-36 T 31-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DY252_07620 b468c0cf864d1cf957dadbe36b865156 432 Pfam PF02417 Chromate transporter 234 423 1.7E-28 T 31-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DY252_11500 09bd3438600f86026ebf30b7c4736cd8 384 SUPERFAMILY SSF53756 15 369 8.72E-49 T 31-10-2018 DY252_11500 09bd3438600f86026ebf30b7c4736cd8 384 Gene3D G3DSA:3.40.50.2000 170 350 2.9E-38 T 31-10-2018 DY252_11500 09bd3438600f86026ebf30b7c4736cd8 384 Pfam PF00534 Glycosyl transferases group 1 200 330 2.9E-26 T 31-10-2018 IPR001296 Glycosyl transferase, family 1 DY252_11500 09bd3438600f86026ebf30b7c4736cd8 384 Gene3D G3DSA:3.40.50.2000 15 363 2.9E-38 T 31-10-2018 DY252_20825 fe04944b920b979ac696ef61a8dda242 401 Pfam PF00872 Transposase, Mutator family 8 372 3.2E-129 T 31-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 DY252_20895 fe04944b920b979ac696ef61a8dda242 401 Pfam PF00872 Transposase, Mutator family 8 372 3.2E-129 T 31-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 DY252_05155 f4ea763d0fd427794d2bcac60cb38b06 276 Pfam PF08241 Methyltransferase domain 85 130 1.2E-9 T 31-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DY252_05155 f4ea763d0fd427794d2bcac60cb38b06 276 SUPERFAMILY SSF53335 18 189 1.82E-22 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_05155 f4ea763d0fd427794d2bcac60cb38b06 276 Gene3D G3DSA:3.40.50.150 9 183 1.6E-17 T 31-10-2018 DY252_00940 5cfe97eedbf9ddb2f2561b7ca383a904 467 SUPERFAMILY SSF56059 10 458 5.82E-68 T 31-10-2018 DY252_00940 5cfe97eedbf9ddb2f2561b7ca383a904 467 PIRSF PIRSF005522 1 467 1.1E-219 T 31-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 DY252_00940 5cfe97eedbf9ddb2f2561b7ca383a904 467 Pfam PF14403 Circularly permuted ATP-grasp type 2 67 443 1.7E-160 T 31-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 DY252_00940 5cfe97eedbf9ddb2f2561b7ca383a904 467 Gene3D G3DSA:3.30.1490.270 340 400 5.4E-26 T 31-10-2018 DY252_00940 5cfe97eedbf9ddb2f2561b7ca383a904 467 Gene3D G3DSA:3.40.50.11290 206 303 4.4E-41 T 31-10-2018 DY252_10040 cba5f2e21b27542977294773bc5f6eab 271 Gene3D G3DSA:3.60.21.10 1 265 7.4E-106 T 31-10-2018 IPR029052 Metallo-dependent phosphatase-like DY252_10040 cba5f2e21b27542977294773bc5f6eab 271 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 260 2.0E-84 T 31-10-2018 IPR005235 Metallophosphoesterase, YmdB-like DY252_10040 cba5f2e21b27542977294773bc5f6eab 271 Pfam PF13277 YmdB-like protein 4 257 6.3E-105 T 31-10-2018 IPR005235 Metallophosphoesterase, YmdB-like DY252_10040 cba5f2e21b27542977294773bc5f6eab 271 PIRSF PIRSF004789 1 265 3.0E-91 T 31-10-2018 IPR005235 Metallophosphoesterase, YmdB-like DY252_10040 cba5f2e21b27542977294773bc5f6eab 271 SUPERFAMILY SSF56300 1 260 3.63E-85 T 31-10-2018 DY252_04450 a9ce0f02d2670d3d9c1fc76af8bbb47b 166 Pfam PF03918 Cytochrome C biogenesis protein 18 157 5.7E-53 T 31-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family DY252_04450 a9ce0f02d2670d3d9c1fc76af8bbb47b 166 Gene3D G3DSA:1.10.8.640 24 106 2.4E-30 T 31-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily DY252_18520 72d86ffcce672727902eb87f4b3f145a 228 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 26 224 3.3E-49 T 31-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DY252_18520 72d86ffcce672727902eb87f4b3f145a 228 Gene3D G3DSA:3.90.850.10 1 228 4.0E-75 T 31-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DY252_18520 72d86ffcce672727902eb87f4b3f145a 228 SUPERFAMILY SSF56529 21 227 1.19E-62 T 31-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DY252_07715 626696c886d05d885a7126429b3a75c2 111 Pfam PF04956 TrbC/VIRB2 family 11 101 7.0E-26 T 31-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 DY252_16905 2b71ea1a1b606eee0a764c90718b29a0 450 Pfam PF04932 O-Antigen ligase 221 363 2.3E-13 T 31-10-2018 IPR007016 O-antigen ligase-related DY252_17760 07d6bf4cc742a7e241d2df597a95ef8c 215 Gene3D G3DSA:1.20.120.1630 4 163 4.5E-21 T 31-10-2018 DY252_17760 07d6bf4cc742a7e241d2df597a95ef8c 215 Pfam PF04191 Phospholipid methyltransferase 79 146 3.8E-9 T 31-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 DY252_15180 aefb89827ebb3e4222c2f4f2439660e0 365 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 1 348 2.3E-77 T 31-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 DY252_15180 aefb89827ebb3e4222c2f4f2439660e0 365 Pfam PF03739 Predicted permease YjgP/YjgQ family 1 348 2.1E-63 T 31-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 DY252_18780 02f87257c84681fa61bdf31e452f4940 190 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 159 1.3E-21 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_08790 978147ffc3afb657c8466d7e9cdb2b4f 304 SUPERFAMILY SSF53850 64 242 1.41E-8 T 31-10-2018 DY252_11335 96021b4cc97c69c74e7ce93c77bdbec6 622 Pfam PF00563 EAL domain 354 586 9.8E-57 T 31-10-2018 IPR001633 EAL domain DY252_11335 96021b4cc97c69c74e7ce93c77bdbec6 622 Gene3D G3DSA:3.30.450.20 24 130 1.3E-7 T 31-10-2018 DY252_11335 96021b4cc97c69c74e7ce93c77bdbec6 622 Gene3D G3DSA:3.20.20.450 350 599 1.0E-62 T 31-10-2018 IPR035919 EAL domain superfamily DY252_11335 96021b4cc97c69c74e7ce93c77bdbec6 622 SUPERFAMILY SSF141868 354 591 4.45E-59 T 31-10-2018 IPR035919 EAL domain superfamily DY252_11335 96021b4cc97c69c74e7ce93c77bdbec6 622 SMART SM00052 348 591 9.0E-41 T 31-10-2018 IPR001633 EAL domain DY252_11335 96021b4cc97c69c74e7ce93c77bdbec6 622 SUPERFAMILY SSF55785 15 78 1.68E-5 T 31-10-2018 IPR035965 PAS domain superfamily DY252_15295 08956cfc525c6d2d12296f5397b9c780 228 Pfam PF02674 Colicin V production protein 15 156 5.5E-32 T 31-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 DY252_09230 c2a62952c171967db8cec3f081b55eba 249 SUPERFAMILY SSF56281 13 246 9.79E-12 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_09230 c2a62952c171967db8cec3f081b55eba 249 Pfam PF14234 Domain of unknown function (DUF4336) 35 168 6.9E-16 T 31-10-2018 IPR025638 Protein of unknown function DUF4336 DY252_10495 cd7a8d45634703ac8f85d6c2b7c149f6 154 SUPERFAMILY SSF55298 5 153 1.88E-57 T 31-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DY252_10495 cd7a8d45634703ac8f85d6c2b7c149f6 154 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 8 146 1.3E-38 T 31-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like DY252_10495 cd7a8d45634703ac8f85d6c2b7c149f6 154 Gene3D G3DSA:3.30.1330.40 1 153 5.1E-65 T 31-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DY252_10385 0559a53e367c312c3d6b35f353013813 97 Gene3D G3DSA:3.30.2310.20 2 94 7.3E-17 T 31-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DY252_10385 0559a53e367c312c3d6b35f353013813 97 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 94 6.4E-19 T 31-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DY252_04795 3b6cb7a38fc54ee0cd17e8c1a047088a 287 Pfam PF15916 Domain of unknown function (DUF4743) 3 116 9.4E-16 T 31-10-2018 IPR031804 Domain of unknown function DUF4743 DY252_04795 3b6cb7a38fc54ee0cd17e8c1a047088a 287 SUPERFAMILY SSF55811 95 262 6.92E-20 T 31-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DY252_04795 3b6cb7a38fc54ee0cd17e8c1a047088a 287 Gene3D G3DSA:3.30.750.160 20 202 3.4E-91 T 31-10-2018 DY252_04795 3b6cb7a38fc54ee0cd17e8c1a047088a 287 Gene3D G3DSA:3.90.79.10 115 278 3.4E-91 T 31-10-2018 DY252_16880 5d42b99ea933c329fbfbe9a65f0f6a24 308 Gene3D G3DSA:1.10.10.10 8 93 4.9E-23 T 31-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DY252_16880 5d42b99ea933c329fbfbe9a65f0f6a24 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 7.7E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_16880 5d42b99ea933c329fbfbe9a65f0f6a24 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 7.7E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_16880 5d42b99ea933c329fbfbe9a65f0f6a24 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 7.7E-8 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_16880 5d42b99ea933c329fbfbe9a65f0f6a24 308 Gene3D G3DSA:3.40.190.10 169 271 2.8E-62 T 31-10-2018 DY252_16880 5d42b99ea933c329fbfbe9a65f0f6a24 308 Pfam PF03466 LysR substrate binding domain 94 300 1.5E-45 T 31-10-2018 IPR005119 LysR, substrate-binding DY252_16880 5d42b99ea933c329fbfbe9a65f0f6a24 308 SUPERFAMILY SSF53850 95 303 2.48E-49 T 31-10-2018 DY252_16880 5d42b99ea933c329fbfbe9a65f0f6a24 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 69 6.4E-18 T 31-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DY252_16880 5d42b99ea933c329fbfbe9a65f0f6a24 308 Gene3D G3DSA:3.40.190.10 97 297 2.8E-62 T 31-10-2018 DY252_16880 5d42b99ea933c329fbfbe9a65f0f6a24 308 SUPERFAMILY SSF46785 12 117 1.06E-21 T 31-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DY252_05950 b9117308c9254607c70e433ec8e479ec 235 Pfam PF04405 Domain of Unknown function (DUF542) 19 71 1.6E-14 T 31-10-2018 IPR019903 Repair of iron centres family DY252_05950 b9117308c9254607c70e433ec8e479ec 235 Gene3D G3DSA:1.20.120.520 91 235 3.4E-25 T 31-10-2018 DY252_05950 b9117308c9254607c70e433ec8e479ec 235 Pfam PF01814 Hemerythrin HHE cation binding domain 92 233 2.4E-21 T 31-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 DY252_17570 e46d6e9341f4e166275ebe328cb2ec4e 147 Pfam PF10768 Class II flagellar assembly regulator 1 142 4.2E-34 T 31-10-2018 IPR019704 Flagellar assembly regulator FliX, class II GO:0044781 DY252_19435 e0bb20cb98d28e3edd4b9ac72522490e 195 Pfam PF09335 SNARE associated Golgi protein 35 155 4.0E-12 T 31-10-2018 IPR032816 SNARE associated Golgi protein DY252_08310 debde9fa616adce703579929fe55fe44 191 SUPERFAMILY SSF159275 7 191 2.48E-47 T 31-10-2018 DY252_08310 debde9fa616adce703579929fe55fe44 191 Pfam PF06475 Putative glycolipid-binding 10 190 6.3E-53 T 31-10-2018 IPR009467 Putative glycolipid-binding protein DY252_14370 a1a8aca2538faf9c3b9fee468662842d 363 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 324 7.1E-55 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_14370 a1a8aca2538faf9c3b9fee468662842d 363 Gene3D G3DSA:3.40.190.10 154 324 5.8E-122 T 31-10-2018 DY252_14370 a1a8aca2538faf9c3b9fee468662842d 363 PIRSF PIRSF039026 1 358 3.2E-130 T 31-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like DY252_14370 a1a8aca2538faf9c3b9fee468662842d 363 SUPERFAMILY SSF53850 145 227 8.9E-5 T 31-10-2018 DY252_14370 a1a8aca2538faf9c3b9fee468662842d 363 Gene3D G3DSA:3.40.190.170 34 338 5.8E-122 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_09945 b951937f8e8bf2b919e405cd828c46ae 294 SUPERFAMILY SSF56281 14 257 2.57E-48 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_09945 b951937f8e8bf2b919e405cd828c46ae 294 Gene3D G3DSA:3.60.15.10 9 294 4.4E-107 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_09945 b951937f8e8bf2b919e405cd828c46ae 294 SMART SM00849 23 213 7.9E-21 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_09945 b951937f8e8bf2b919e405cd828c46ae 294 Pfam PF00753 Metallo-beta-lactamase superfamily 23 213 4.8E-22 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_21545 881df0f38a9e7006ad1faff245ddb1d6 95 SUPERFAMILY SSF54909 1 80 2.95E-13 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_21545 881df0f38a9e7006ad1faff245ddb1d6 95 Pfam PF03795 YCII-related domain 2 75 1.6E-5 T 31-10-2018 IPR005545 YCII-related DY252_00945 5bb250ad3520abc4ae84b10d08fd9a08 315 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 310 1.5E-95 T 31-10-2018 IPR007296 Domain of unknown function DUF403 DY252_14980 a1a68ffd4596756a4b3c02950b1b0902 422 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 36 260 6.4E-56 T 31-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DY252_14980 a1a68ffd4596756a4b3c02950b1b0902 422 Gene3D G3DSA:3.40.710.10 24 292 4.5E-79 T 31-10-2018 DY252_14980 a1a68ffd4596756a4b3c02950b1b0902 422 SUPERFAMILY SSF110997 336 414 2.09E-5 T 31-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DY252_14980 a1a68ffd4596756a4b3c02950b1b0902 422 SUPERFAMILY SSF56601 16 276 1.01E-73 T 31-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DY252_14980 a1a68ffd4596756a4b3c02950b1b0902 422 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 147 160 2.3E-10 T 31-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DY252_14980 a1a68ffd4596756a4b3c02950b1b0902 422 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 67 78 2.3E-10 T 31-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DY252_14980 a1a68ffd4596756a4b3c02950b1b0902 422 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 120 137 2.3E-10 T 31-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DY252_14980 a1a68ffd4596756a4b3c02950b1b0902 422 Pfam PF05036 Sporulation related domain 338 416 1.8E-9 T 31-10-2018 IPR007730 Sporulation-like domain GO:0042834 DY252_00130 62f9b8433769bebf75e42c69440152d2 745 Pfam PF13641 Glycosyltransferase like family 2 466 696 1.3E-11 T 31-10-2018 DY252_00130 62f9b8433769bebf75e42c69440152d2 745 SUPERFAMILY SSF53448 461 722 3.0E-42 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_00130 62f9b8433769bebf75e42c69440152d2 745 Gene3D G3DSA:3.90.550.10 454 701 3.0E-37 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_15835 dcdfe96ac7f552edaefea87973cd3783 212 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 75 4.0E-6 T 31-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DY252_15835 dcdfe96ac7f552edaefea87973cd3783 212 Gene3D G3DSA:1.20.120.1760 11 208 1.1E-18 T 31-10-2018 DY252_00235 2390c85f314da3958ea4b00410831fa7 328 SUPERFAMILY SSF53822 29 324 6.34E-68 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_00235 2390c85f314da3958ea4b00410831fa7 328 Gene3D G3DSA:3.40.50.2300 30 310 6.3E-105 T 31-10-2018 DY252_00235 2390c85f314da3958ea4b00410831fa7 328 Gene3D G3DSA:3.40.50.2300 131 324 6.3E-105 T 31-10-2018 DY252_00235 2390c85f314da3958ea4b00410831fa7 328 Pfam PF13407 Periplasmic binding protein domain 30 287 1.6E-57 T 31-10-2018 IPR025997 Periplasmic binding protein DY252_00235 2390c85f314da3958ea4b00410831fa7 328 TIGRFAM TIGR02637 RhaS: rhamnose ABC transporter, rhamnose-binding protein 30 325 1.3E-130 T 31-10-2018 IPR013459 Rhamnose ABC transporter, substrate-binding protein RhaS GO:0015762 DY252_01005 2e271d98fb2f8c3fed0a3280bfb5e7f8 353 Gene3D G3DSA:1.10.3470.10 19 352 5.1E-93 T 31-10-2018 IPR037294 ABC transporter, BtuC-like DY252_01005 2e271d98fb2f8c3fed0a3280bfb5e7f8 353 Pfam PF01032 FecCD transport family 33 345 3.5E-81 T 31-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DY252_01005 2e271d98fb2f8c3fed0a3280bfb5e7f8 353 SUPERFAMILY SSF81345 14 345 6.8E-74 T 31-10-2018 IPR037294 ABC transporter, BtuC-like DY252_06850 2e4f68599ba90be21a74daf856e34f2a 119 Pfam PF06803 Protein of unknown function (DUF1232) 20 55 9.9E-12 T 31-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 DY252_19925 c02dee5e8a3720fcd21c313497a37316 62 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 4 45 3.9E-23 T 31-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type DY252_19925 c02dee5e8a3720fcd21c313497a37316 62 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 47 7.6E-24 T 31-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type DY252_18245 bc87f2c5371bae4983e92b7156b4d90d 299 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 25 297 8.2E-55 T 31-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DY252_18860 b1f27dcdfb5410fb77830a91e42e074d 436 Gene3D G3DSA:1.10.3720.10 184 435 7.9E-60 T 31-10-2018 IPR035906 MetI-like superfamily DY252_18860 b1f27dcdfb5410fb77830a91e42e074d 436 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 217 428 1.1E-17 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_18860 b1f27dcdfb5410fb77830a91e42e074d 436 SUPERFAMILY SSF161098 27 433 2.21E-54 T 31-10-2018 IPR035906 MetI-like superfamily DY252_02480 e51c5463a5b6c95a6c11b4f617db0ef9 296 Gene3D G3DSA:3.40.50.2000 3 129 1.8E-12 T 31-10-2018 DY252_02480 e51c5463a5b6c95a6c11b4f617db0ef9 296 SUPERFAMILY SSF53756 4 292 2.48E-54 T 31-10-2018 DY252_02480 e51c5463a5b6c95a6c11b4f617db0ef9 296 Gene3D G3DSA:3.40.50.2000 138 294 1.4E-34 T 31-10-2018 DY252_02480 e51c5463a5b6c95a6c11b4f617db0ef9 296 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 52 272 1.0E-24 T 31-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DY252_08770 3bc756dd328d7bf640f1fcd894413857 335 Pfam PF03824 High-affinity nickel-transport protein 88 235 6.0E-21 T 31-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 DY252_21275 580732e72b2a32a762966c86f5312b6c 71 Pfam PF12728 Helix-turn-helix domain 8 62 5.1E-7 T 31-10-2018 DY252_08105 091061d98d4903455a7bb4f160a3bfc8 92 Pfam PF04267 Sarcosine oxidase, delta subunit family 4 81 2.1E-28 T 31-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DY252_08105 091061d98d4903455a7bb4f160a3bfc8 92 Gene3D G3DSA:3.30.2270.10 2 92 8.5E-29 T 31-10-2018 IPR038561 Sarcosine oxidase subunit delta superfamily KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 DY252_00330 4d27225c45d2b772bac35bdb86e11ae0 197 Gene3D G3DSA:3.40.30.10 43 195 1.6E-46 T 31-10-2018 DY252_00330 4d27225c45d2b772bac35bdb86e11ae0 197 SUPERFAMILY SSF52833 45 196 2.03E-44 T 31-10-2018 IPR036249 Thioredoxin-like superfamily DY252_00330 4d27225c45d2b772bac35bdb86e11ae0 197 Pfam PF02630 SCO1/SenC 44 176 1.1E-34 T 31-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DY252_00455 6be4f1bb26b9fb5d72e21439569f64f3 98 PRINTS PR00946 Mercury scavenger protein signature 27 38 1.6E-16 T 31-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 DY252_00455 6be4f1bb26b9fb5d72e21439569f64f3 98 PRINTS PR00946 Mercury scavenger protein signature 83 97 1.6E-16 T 31-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 DY252_00455 6be4f1bb26b9fb5d72e21439569f64f3 98 PRINTS PR00946 Mercury scavenger protein signature 69 83 1.6E-16 T 31-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 DY252_00455 6be4f1bb26b9fb5d72e21439569f64f3 98 PRINTS PR00946 Mercury scavenger protein signature 54 69 1.6E-16 T 31-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 DY252_00455 6be4f1bb26b9fb5d72e21439569f64f3 98 PRINTS PR00946 Mercury scavenger protein signature 38 54 1.6E-16 T 31-10-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 DY252_00455 6be4f1bb26b9fb5d72e21439569f64f3 98 SUPERFAMILY SSF55008 26 95 2.62E-17 T 31-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DY252_00455 6be4f1bb26b9fb5d72e21439569f64f3 98 Gene3D G3DSA:3.30.70.100 21 98 1.5E-17 T 31-10-2018 DY252_00455 6be4f1bb26b9fb5d72e21439569f64f3 98 Pfam PF00403 Heavy-metal-associated domain 32 83 7.9E-13 T 31-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DY252_18330 caf4238d6f5377c34810959a0850c943 189 SUPERFAMILY SSF53335 1 180 1.44E-38 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_18330 caf4238d6f5377c34810959a0850c943 189 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 181 3.8E-42 T 31-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 DY252_18330 caf4238d6f5377c34810959a0850c943 189 Gene3D G3DSA:3.40.50.150 1 187 1.1E-49 T 31-10-2018 DY252_18330 caf4238d6f5377c34810959a0850c943 189 PIRSF PIRSF004553 1 188 6.1E-47 T 31-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 DY252_18330 caf4238d6f5377c34810959a0850c943 189 Pfam PF03602 Conserved hypothetical protein 95 1 183 8.9E-48 T 31-10-2018 DY252_08405 e9c04db7c01d3a2ef796dd6829a08c0b 139 SUPERFAMILY SSF47226 26 136 1.96E-15 T 31-10-2018 IPR036641 HPT domain superfamily GO:0000160 DY252_08405 e9c04db7c01d3a2ef796dd6829a08c0b 139 Gene3D G3DSA:1.20.120.160 22 138 2.2E-14 T 31-10-2018 IPR036641 HPT domain superfamily GO:0000160 DY252_08405 e9c04db7c01d3a2ef796dd6829a08c0b 139 Pfam PF01627 Hpt domain 58 122 3.7E-7 T 31-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DY252_21240 abe056841d8b481bed1f96dc3c8f9c38 422 TIGRFAM TIGR04474 tcm_partner: three-Cys-motif partner protein 16 290 1.1E-64 T 31-10-2018 IPR031009 Three-Cys-motif partner protein DY252_20445 3a7b37ced39e494cf1e26dd85997cfbc 319 Gene3D G3DSA:1.25.40.10 43 293 3.3E-18 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_20445 3a7b37ced39e494cf1e26dd85997cfbc 319 SUPERFAMILY SSF48452 205 285 6.9E-15 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_20445 3a7b37ced39e494cf1e26dd85997cfbc 319 SMART SM00028 253 286 11.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_20445 3a7b37ced39e494cf1e26dd85997cfbc 319 SMART SM00028 219 252 12.0 T 31-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DY252_08925 91a92abf504a395be628e348f5af23ee 172 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 6 141 3.0E-6 T 31-10-2018 DY252_08925 91a92abf504a395be628e348f5af23ee 172 Gene3D G3DSA:3.30.70.1730 1 131 5.8E-37 T 31-10-2018 DY252_08925 91a92abf504a395be628e348f5af23ee 172 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 25.561 T 31-10-2018 IPR022973 Ribosomal protein L10 DY252_08925 91a92abf504a395be628e348f5af23ee 172 SUPERFAMILY SSF160369 2 168 3.14E-53 T 31-10-2018 DY252_08925 91a92abf504a395be628e348f5af23ee 172 Pfam PF00466 Ribosomal protein L10 2 98 9.9E-26 T 31-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 DY252_19420 ad52b2e4871c82b67634878f2af2fe3b 340 Pfam PF02653 Branched-chain amino acid transport system / permease component 36 311 1.0E-29 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_01205 b3460d56d28bec39e22338814947188c 229 PIRSF PIRSF006324 9 229 5.3E-42 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_01205 b3460d56d28bec39e22338814947188c 229 Pfam PF01810 LysE type translocator 23 228 6.1E-32 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_17180 15fb0545b23d38bf5d8cd469fe868b46 154 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 5 146 1.7E-20 T 31-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like DY252_17180 15fb0545b23d38bf5d8cd469fe868b46 154 Gene3D G3DSA:3.30.1330.40 1 153 4.9E-46 T 31-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DY252_17180 15fb0545b23d38bf5d8cd469fe868b46 154 SUPERFAMILY SSF55298 1 152 7.85E-39 T 31-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DY252_12005 83763471bb7d5d1b0fef5d146b1a2258 253 Pfam PF02361 Cobalt transport protein 15 214 2.0E-30 T 31-10-2018 IPR003339 ABC/ECF transporter, transmembrane component DY252_12005 83763471bb7d5d1b0fef5d146b1a2258 253 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 16 210 1.6E-43 T 31-10-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 DY252_00225 52e525d96cdfebd32673b0a1bd452944 325 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 305 2.8E-40 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_11450 db86a7e67fc07d09597865c84d011f3e 127 Pfam PF04134 Protein of unknown function, DUF393 4 110 3.8E-23 T 31-10-2018 IPR007263 Protein of unknown function DUF393 DY252_06960 528e5a2db55527b5dab1b8d308c3ed88 515 SUPERFAMILY SSF55154 5 218 2.78E-31 T 31-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 DY252_06960 528e5a2db55527b5dab1b8d308c3ed88 515 Pfam PF01928 CYTH domain 6 201 2.7E-16 T 31-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DY252_06960 528e5a2db55527b5dab1b8d308c3ed88 515 Gene3D G3DSA:2.40.320.10 2 204 8.6E-28 T 31-10-2018 DY252_06960 528e5a2db55527b5dab1b8d308c3ed88 515 SMART SM01118 5 209 5.3E-22 T 31-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DY252_06960 528e5a2db55527b5dab1b8d308c3ed88 515 SMART SM00880 234 499 1.7E-49 T 31-10-2018 IPR007899 CHAD domain DY252_06960 528e5a2db55527b5dab1b8d308c3ed88 515 Pfam PF05235 CHAD domain 235 467 3.3E-49 T 31-10-2018 IPR007899 CHAD domain DY252_06960 528e5a2db55527b5dab1b8d308c3ed88 515 Gene3D G3DSA:1.40.20.10 215 512 6.2E-67 T 31-10-2018 IPR038186 CHAD domain superfamily DY252_19870 c04a627e81990ebdbf34f2d530b5f785 220 Pfam PF09335 SNARE associated Golgi protein 64 181 1.8E-19 T 31-10-2018 IPR032816 SNARE associated Golgi protein DY252_16540 49a687b55366a9e2aa7b2375359df4bf 154 Gene3D G3DSA:1.10.10.2520 20 113 4.1E-14 T 31-10-2018 DY252_16540 49a687b55366a9e2aa7b2375359df4bf 154 Pfam PF07486 Cell Wall Hydrolase 35 150 3.8E-23 T 31-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 DY252_20440 3879ff573ccf07b9c8df3f692f12f577 225 SUPERFAMILY SSF51182 88 187 5.53E-6 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_20440 3879ff573ccf07b9c8df3f692f12f577 225 Gene3D G3DSA:2.60.120.10 2 224 6.1E-78 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_20440 3879ff573ccf07b9c8df3f692f12f577 225 Pfam PF07385 D-lyxose isomerase 1 221 2.4E-84 T 31-10-2018 IPR010864 D-lyxose isomerase KEGG: 00040+5.3.1.15 DY252_14930 a3da4271350304a7be22da45fb0ed315 160 Gene3D G3DSA:3.40.630.30 2 160 3.7E-46 T 31-10-2018 DY252_14930 a3da4271350304a7be22da45fb0ed315 160 SUPERFAMILY SSF55729 1 160 1.96E-28 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_14930 a3da4271350304a7be22da45fb0ed315 160 Pfam PF00583 Acetyltransferase (GNAT) family 40 133 4.1E-11 T 31-10-2018 IPR000182 GNAT domain DY252_13110 e6b2cf7eb0d950f75e136a810680ad72 213 Pfam PF03167 Uracil DNA glycosylase superfamily 38 205 3.1E-31 T 31-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DY252_13110 e6b2cf7eb0d950f75e136a810680ad72 213 Gene3D G3DSA:3.40.470.10 4 211 5.8E-63 T 31-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DY252_13110 e6b2cf7eb0d950f75e136a810680ad72 213 SUPERFAMILY SSF52141 11 212 1.67E-49 T 31-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DY252_13110 e6b2cf7eb0d950f75e136a810680ad72 213 SMART SM00986 37 204 3.3E-31 T 31-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DY252_13110 e6b2cf7eb0d950f75e136a810680ad72 213 SMART SM00987 37 204 3.3E-31 T 31-10-2018 DY252_00220 11c4f4e551583027c0b82da7434cb435 338 Pfam PF02653 Branched-chain amino acid transport system / permease component 62 316 1.0E-45 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_02215 9f445f61daf9c0af7a5ed347987d6622 179 Pfam PF04945 YHS domain 58 97 6.5E-10 T 31-10-2018 IPR007029 YHS domain DY252_12615 a6c027be12a042fcb21c036330f3929b 512 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 3.1E-137 T 31-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane DY252_13870 523db8eef471f6b83650dfe757e6241d 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 14 420 1.3E-122 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_13870 523db8eef471f6b83650dfe757e6241d 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 5 411 1.9E-108 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_13870 523db8eef471f6b83650dfe757e6241d 426 PIRSF PIRSF006066 1 426 5.1E-140 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_10505 2ca0657584455070ec1afc6668758fe9 556 Pfam PF08019 Domain of unknown function (DUF1705) 60 212 4.1E-46 T 31-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 DY252_10505 2ca0657584455070ec1afc6668758fe9 556 Pfam PF00884 Sulfatase 241 530 7.2E-43 T 31-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DY252_10505 2ca0657584455070ec1afc6668758fe9 556 SUPERFAMILY SSF53649 336 532 3.05E-17 T 31-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DY252_10505 2ca0657584455070ec1afc6668758fe9 556 Gene3D G3DSA:3.40.720.10 215 550 5.4E-83 T 31-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DY252_07495 eb9427f55f84e71d03d446eeb13353b6 390 SUPERFAMILY SSF51261 99 347 4.08E-68 T 31-10-2018 IPR011055 Duplicated hybrid motif DY252_07495 eb9427f55f84e71d03d446eeb13353b6 390 Gene3D G3DSA:3.10.450.350 124 365 2.7E-86 T 31-10-2018 DY252_07495 eb9427f55f84e71d03d446eeb13353b6 390 Pfam PF01551 Peptidase family M23 250 346 2.3E-33 T 31-10-2018 IPR016047 Peptidase M23 DY252_07495 eb9427f55f84e71d03d446eeb13353b6 390 Gene3D G3DSA:2.70.70.10 222 352 2.7E-86 T 31-10-2018 IPR011055 Duplicated hybrid motif DY252_06940 0bab3a2eb1198e6e3b7a7447d4980cd0 66 Pfam PF03884 DNA gyrase inhibitor YacG 14 55 1.4E-14 T 31-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 DY252_06940 0bab3a2eb1198e6e3b7a7447d4980cd0 66 SUPERFAMILY SSF57716 10 61 1.71E-14 T 31-10-2018 DY252_06940 0bab3a2eb1198e6e3b7a7447d4980cd0 66 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 8 66 15.381 T 31-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 DY252_06940 0bab3a2eb1198e6e3b7a7447d4980cd0 66 Gene3D G3DSA:3.30.50.10 6 65 6.7E-17 T 31-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 DY252_03350 00e774a6ff9d348540e6c910e8016414 313 SUPERFAMILY SSF53850 67 273 6.73E-16 T 31-10-2018 DY252_17470 586d8c152aee30b3dab6b5ad2157a243 138 SUPERFAMILY SSF160544 29 107 4.58E-20 T 31-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DY252_17470 586d8c152aee30b3dab6b5ad2157a243 138 Gene3D G3DSA:3.40.1690.10 28 109 4.2E-23 T 31-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DY252_17470 586d8c152aee30b3dab6b5ad2157a243 138 Pfam PF01312 FlhB HrpN YscU SpaS Family 31 103 5.3E-17 T 31-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DY252_18375 390e31ffa09fe13417e3d99a0e56c1e4 151 Gene3D G3DSA:1.20.120.20 26 150 8.8E-6 T 31-10-2018 DY252_18375 390e31ffa09fe13417e3d99a0e56c1e4 151 SUPERFAMILY SSF47162 45 145 4.58E-5 T 31-10-2018 DY252_16680 7d249ccea7d12c6969297e1fa528e5a7 195 Gene3D G3DSA:3.30.160.670 17 186 5.7E-43 T 31-10-2018 DY252_16680 7d249ccea7d12c6969297e1fa528e5a7 195 Pfam PF13590 Domain of unknown function (DUF4136) 26 183 6.6E-35 T 31-10-2018 IPR025411 Domain of unknown function DUF4136 DY252_12405 2a8da5c2c544775889af56dc0192382e 274 Pfam PF02698 DUF218 domain 109 250 1.9E-21 T 31-10-2018 IPR003848 Domain of unknown function DUF218 DY252_19130 9d2c5b9705179187a35d121b8e217cb6 515 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 307 1.3E-47 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_19130 9d2c5b9705179187a35d121b8e217cb6 515 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 329 503 1.5E-29 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_04655 104f9ef1900f8624a5539f349471c57e 307 SUPERFAMILY SSF50199 100 196 4.84E-7 T 31-10-2018 DY252_00370 a99637a07e1467e7ae70e21f5749966b 166 Pfam PF04214 Protein of unknown function, DUF 74 142 2.3E-21 T 31-10-2018 IPR007332 Protein of unknown function DUF411 DY252_13655 a66f5fed1ccf398f422a14c2393a5038 531 SUPERFAMILY SSF50974 50 319 1.07E-18 T 31-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 DY252_13655 a66f5fed1ccf398f422a14c2393a5038 531 Gene3D G3DSA:2.130.10.10 13 286 2.0E-18 T 31-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DY252_07065 25f3bb316f58a5730901a73fb8c62593 259 Pfam PF05742 Transport and Golgi organisation 2 1 173 3.2E-27 T 31-10-2018 IPR008551 Transport and Golgi organisation protein 2 DY252_07065 25f3bb316f58a5730901a73fb8c62593 259 Gene3D G3DSA:3.60.60.10 2 229 1.7E-9 T 31-10-2018 DY252_00290 3fc2eb53dc449f3fc37a73829badd9d8 503 Pfam PF10593 Z1 domain 18 251 1.8E-77 T 31-10-2018 IPR018310 Putative endonuclease, Z1 domain DY252_07685 4fd25326cb73648aa9e259adc74f04f8 658 Pfam PF11843 Protein of unknown function (DUF3363) 275 653 1.1E-145 T 31-10-2018 IPR021795 Protein of unknown function DUF3363 DY252_08760 cd1bf8b3a5b1133a9bc9e90dff9e8716 246 Gene3D G3DSA:1.10.10.1320 5 96 3.8E-6 T 31-10-2018 DY252_08760 cd1bf8b3a5b1133a9bc9e90dff9e8716 246 Pfam PF10099 Anti-sigma-K factor rskA 60 237 2.0E-23 T 31-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 DY252_20950 a5f019e972ef40caa6314661766935be 836 SMART SM00382 440 705 1.4E-4 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_20950 a5f019e972ef40caa6314661766935be 836 SUPERFAMILY SSF52540 397 747 7.32E-52 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_20950 a5f019e972ef40caa6314661766935be 836 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 183 388 1.4E-14 T 31-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 DY252_10725 204822000a3a6d9edb5b24416ad7f9f0 508 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 259 409 1.3E-9 T 31-10-2018 IPR019285 Protein of unknown function DUF2336 DY252_04300 b67e450c7788df372a04f2079b01081b 261 SUPERFAMILY SSF75708 82 260 2.62E-32 T 31-10-2018 DY252_04300 b67e450c7788df372a04f2079b01081b 261 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 39 206 0.006 T 31-10-2018 DY252_20050 5a5fa045270ae9570c3a79e34a584920 640 SUPERFAMILY SSF116726 351 436 4.58E-18 T 31-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DY252_20050 5a5fa045270ae9570c3a79e34a584920 640 Gene3D G3DSA:3.30.70.1450 356 432 5.1E-16 T 31-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DY252_20050 5a5fa045270ae9570c3a79e34a584920 640 Gene3D G3DSA:3.30.70.1450 212 288 2.7E-10 T 31-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DY252_20050 5a5fa045270ae9570c3a79e34a584920 640 Pfam PF02080 TrkA-C domain 360 430 7.6E-11 T 31-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DY252_20050 5a5fa045270ae9570c3a79e34a584920 640 Pfam PF02080 TrkA-C domain 217 284 1.2E-7 T 31-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DY252_20050 5a5fa045270ae9570c3a79e34a584920 640 SUPERFAMILY SSF116726 211 288 3.66E-12 T 31-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DY252_20050 5a5fa045270ae9570c3a79e34a584920 640 Pfam PF03600 Citrate transporter 16 587 1.1E-45 T 31-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 DY252_00090 5222f895eb73480e25118cc046e34fe6 401 Pfam PF04230 Polysaccharide pyruvyl transferase 85 328 1.6E-18 T 31-10-2018 IPR007345 Polysaccharide pyruvyl transferase DY252_11610 005517c39758b6dc32582637a2138e0d 134 Pfam PF06170 Protein of unknown function (DUF983) 44 128 1.8E-29 T 31-10-2018 IPR009325 Protein of unknown function DUF983 DY252_18370 94c7193ae3657ea1a99831f86fcceed4 193 Pfam PF09335 SNARE associated Golgi protein 50 162 7.0E-11 T 31-10-2018 IPR032816 SNARE associated Golgi protein DY252_21235 29536cc1550b74588cb2973e25228562 317 Pfam PF04471 Restriction endonuclease 10 125 2.8E-7 T 31-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 DY252_21235 29536cc1550b74588cb2973e25228562 317 SUPERFAMILY SSF52980 11 130 9.12E-8 T 31-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DY252_07855 e27b8e6f0974e7235047a3fc2d7eb4a2 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 310 1.5E-34 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_01940 426e90e57f4e58292ccd89ce46adc811 205 Pfam PF04972 BON domain 53 120 4.1E-15 T 31-10-2018 IPR007055 BON domain DY252_01940 426e90e57f4e58292ccd89ce46adc811 205 Pfam PF04972 BON domain 131 197 1.2E-9 T 31-10-2018 IPR007055 BON domain DY252_01940 426e90e57f4e58292ccd89ce46adc811 205 SMART SM00749 58 121 55.0 T 31-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria DY252_01940 426e90e57f4e58292ccd89ce46adc811 205 SMART SM00749 135 198 0.042 T 31-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria DY252_14710 f03b94ff660952f8aba92bfc96430bb2 325 SUPERFAMILY SSF56281 31 283 6.94E-17 T 31-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DY252_14710 f03b94ff660952f8aba92bfc96430bb2 325 Pfam PF00753 Metallo-beta-lactamase superfamily 31 262 8.9E-9 T 31-10-2018 IPR001279 Metallo-beta-lactamase DY252_09835 0bd220640964fee42e706e81d1355522 329 Pfam PF06258 Mitochondrial fission ELM1 18 324 2.2E-77 T 31-10-2018 IPR009367 Mitochondrial fission protein ELM1-like DY252_19815 f6528de4a89f0c4f3b1eac36de7ac450 451 SUPERFAMILY SSF51261 317 442 1.46E-27 T 31-10-2018 IPR011055 Duplicated hybrid motif DY252_19815 f6528de4a89f0c4f3b1eac36de7ac450 451 Gene3D G3DSA:2.70.70.10 306 443 3.7E-26 T 31-10-2018 IPR011055 Duplicated hybrid motif DY252_19815 f6528de4a89f0c4f3b1eac36de7ac450 451 Pfam PF01551 Peptidase family M23 349 438 2.2E-20 T 31-10-2018 IPR016047 Peptidase M23 DY252_17225 d5115a1b0e70fc83e7cc9caa002114b6 329 Gene3D G3DSA:2.40.360.20 159 232 1.2E-6 T 31-10-2018 DY252_07385 ad9a16fa7b499f64d797b2ace1e091e0 231 Pfam PF08511 COQ9 118 193 2.1E-31 T 31-10-2018 IPR013718 COQ9 Reactome: R-HSA-2142789 DY252_07385 ad9a16fa7b499f64d797b2ace1e091e0 231 TIGRFAM TIGR02396 diverge_rpsU: rpsU-divergently transcribed protein 16 197 1.2E-56 T 31-10-2018 IPR012762 Ubiquinone biosynthesis protein COQ9 GO:0006744 Reactome: R-HSA-2142789 DY252_07385 ad9a16fa7b499f64d797b2ace1e091e0 231 Gene3D G3DSA:1.10.357.10 8 189 5.8E-40 T 31-10-2018 DY252_19695 a6b0e3105094f5edcaa68d099b489bb0 313 Pfam PF02653 Branched-chain amino acid transport system / permease component 17 290 7.9E-30 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_22080 1324e8dca7dc7bc68474b44e2900dce6 122 Pfam PF03788 LrgA family 12 105 4.1E-29 T 31-10-2018 IPR005538 LrgA/CidA family GO:0016021 DY252_20520 0be7ac340551fbfa9568a3f95332d30c 211 Pfam PF03458 UPF0126 domain 8 83 5.2E-21 T 31-10-2018 IPR005115 Uncharacterised domain UPF0126 DY252_20520 0be7ac340551fbfa9568a3f95332d30c 211 Pfam PF03458 UPF0126 domain 94 166 2.8E-21 T 31-10-2018 IPR005115 Uncharacterised domain UPF0126 DY252_08075 3da1798676ee80fa0956dc6b45293455 346 Pfam PF11927 Protein of unknown function (DUF3445) 52 292 9.2E-51 T 31-10-2018 IPR021848 Protein of unknown function DUF3445 DY252_15155 2fea5a5291c9e2a80237a43b2efb4e17 80 Pfam PF06568 Domain of unknown function (DUF1127) 37 70 1.1E-8 T 31-10-2018 IPR009506 Protein of unknown function DUF1127 DY252_14420 b33256657bed70b08444d049a8abe578 293 Pfam PF01618 MotA/TolQ/ExbB proton channel family 140 262 1.8E-27 T 31-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DY252_01215 e4e79cc808a542694411f7ba3b704bb5 267 SUPERFAMILY SSF69572 5 258 4.32E-91 T 31-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 DY252_01215 e4e79cc808a542694411f7ba3b704bb5 267 Gene3D G3DSA:3.40.50.720 6 259 1.4E-88 T 31-10-2018 DY252_01215 e4e79cc808a542694411f7ba3b704bb5 267 Pfam PF00899 ThiF family 14 250 6.3E-65 T 31-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DY252_02305 e0ee7ef70a4e97da2eda858d5d189978 210 Pfam PF01810 LysE type translocator 15 204 1.0E-31 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_05100 fe2d5e9237863f6a726a4284285534d0 157 Pfam PF04214 Protein of unknown function, DUF 65 133 5.4E-24 T 31-10-2018 IPR007332 Protein of unknown function DUF411 DY252_07720 2c67ca5cc20ec235c0a0db383989a247 89 PIRSF PIRSF017854 4 89 1.1E-31 T 31-10-2018 IPR016704 Conjugal transfer, TrbD DY252_07720 2c67ca5cc20ec235c0a0db383989a247 89 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 12 88 9.4E-12 T 31-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB DY252_02090 9d54e4807426702984b957f9a11613b7 217 Pfam PF02397 Bacterial sugar transferase 9 187 1.7E-46 T 31-10-2018 IPR003362 Bacterial sugar transferase DY252_16895 81750e10e8dca29162c60d51774baef3 448 SUPERFAMILY SSF48239 84 241 7.85E-14 T 31-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid DY252_16895 81750e10e8dca29162c60d51774baef3 448 Gene3D G3DSA:1.50.10.20 90 190 6.9E-9 T 31-10-2018 DY252_00315 57f797ad57ce501916271fbe99f91f87 159 Gene3D G3DSA:2.60.40.1890 41 152 5.0E-32 T 31-10-2018 IPR036182 Copper chaperone PCuAC superfamily DY252_00315 57f797ad57ce501916271fbe99f91f87 159 SUPERFAMILY SSF110087 13 152 2.09E-40 T 31-10-2018 IPR036182 Copper chaperone PCuAC superfamily DY252_00315 57f797ad57ce501916271fbe99f91f87 159 Pfam PF04314 Copper chaperone PCu(A)C 37 145 1.8E-32 T 31-10-2018 IPR007410 Copper chaperone PCuAC DY252_15695 ed00c93bcb0b2ade505cda93e1f3b5f0 98 Pfam PF11747 Killing trait 33 95 1.9E-8 T 31-10-2018 IPR021070 Killing trait, RebB DY252_02200 e83c021e1bd35ae50196f0d01b1a7c4c 183 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 29 176 3.9E-12 T 31-10-2018 IPR009936 Protein of unknown function DUF1468 DY252_05970 b4ebf990ba84b5ebef812e592eb439eb 197 SUPERFAMILY SSF160387 54 165 8.37E-33 T 31-10-2018 DY252_05970 b4ebf990ba84b5ebef812e592eb439eb 197 Pfam PF05573 NosL 16 163 1.3E-49 T 31-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL DY252_05970 b4ebf990ba84b5ebef812e592eb439eb 197 Gene3D G3DSA:3.30.70.2050 116 197 1.8E-22 T 31-10-2018 DY252_05970 b4ebf990ba84b5ebef812e592eb439eb 197 Gene3D G3DSA:3.30.70.2060 54 115 1.7E-24 T 31-10-2018 DY252_14100 7ee1aaef6e5c8afd34bd469cc56c8885 190 Pfam PF07310 PAS domain 52 120 8.4E-5 T 31-10-2018 IPR009922 Protein of unknown function DUF1457 DY252_01455 f8be35d3c3cd75c07e1285138cb19081 238 Pfam PF04519 Polymer-forming cytoskeletal 116 210 2.8E-18 T 31-10-2018 IPR007607 Bactofilin A/B DY252_04845 9d40a3922b7645424c9951f1f619cf41 193 Pfam PF11233 Protein of unknown function (DUF3035) 30 169 4.5E-40 T 31-10-2018 IPR021395 Protein of unknown function DUF3035 DY252_13445 dbe341141764711e62946a5354f124b6 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 3 102 20.309 T 31-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 DY252_13445 dbe341141764711e62946a5354f124b6 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 97 5.2E-24 T 31-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like DY252_09775 ac42dba6c26df77db495676bdadf617b 229 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 229 27.881 T 31-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DY252_09775 ac42dba6c26df77db495676bdadf617b 229 Pfam PF00156 Phosphoribosyl transferase domain 58 164 5.1E-10 T 31-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DY252_09775 ac42dba6c26df77db495676bdadf617b 229 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 20 191 2.1E-32 T 31-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DY252_09775 ac42dba6c26df77db495676bdadf617b 229 Gene3D G3DSA:3.40.50.2020 6 228 5.3E-64 T 31-10-2018 DY252_09775 ac42dba6c26df77db495676bdadf617b 229 SUPERFAMILY SSF53271 17 224 4.06E-46 T 31-10-2018 IPR029057 Phosphoribosyltransferase-like DY252_15715 3247dd1c69ac0b133bb46acecdaf7113 86 Pfam PF11747 Killing trait 11 73 1.8E-24 T 31-10-2018 IPR021070 Killing trait, RebB DY252_09850 506e9e15eb16882df393aa8b9b71132a 118 Pfam PF11287 Protein of unknown function (DUF3088) 6 114 1.1E-40 T 31-10-2018 IPR021439 Protein of unknown function DUF3088 DY252_12490 0fe5b93b134195da3dfcd4e103ab992b 561 Pfam PF00535 Glycosyl transferase family 2 4 129 5.0E-16 T 31-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DY252_12490 0fe5b93b134195da3dfcd4e103ab992b 561 Gene3D G3DSA:3.90.550.10 1 237 1.8E-21 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_12490 0fe5b93b134195da3dfcd4e103ab992b 561 SUPERFAMILY SSF53448 2 239 5.44E-30 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_12490 0fe5b93b134195da3dfcd4e103ab992b 561 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 357 552 1.6E-12 T 31-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DY252_05300 21291f9945597381f006937f40c4cb55 124 Pfam PF04380 Membrane fusogenic activity 18 94 2.7E-23 T 31-10-2018 IPR007475 Membrane fusogenic activity DY252_07845 92d9982286cf086f1467e68082d06cf0 379 SUPERFAMILY SSF53822 24 357 4.95E-83 T 31-10-2018 IPR028082 Periplasmic binding protein-like I DY252_07845 92d9982286cf086f1467e68082d06cf0 379 Gene3D G3DSA:3.40.50.2300 25 343 2.0E-89 T 31-10-2018 DY252_07845 92d9982286cf086f1467e68082d06cf0 379 Gene3D G3DSA:3.40.50.2300 138 354 2.0E-89 T 31-10-2018 DY252_07845 92d9982286cf086f1467e68082d06cf0 379 Pfam PF13458 Periplasmic binding protein 24 351 3.1E-67 T 31-10-2018 IPR028081 Leucine-binding protein domain DY252_11885 756cf3fd9a5751a9396ceb228340846e 255 Pfam PF01925 Sulfite exporter TauE/SafE 15 245 3.6E-34 T 31-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DY252_05755 54adf4749819c4d9129f1b4417cb3d2d 219 Pfam PF05944 Phage small terminase subunit 41 161 5.0E-34 T 31-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 DY252_13740 666e0f0640c270fa9ef3f03c142d023f 530 Gene3D G3DSA:3.30.1330.90 14 149 1.9E-6 T 31-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DY252_13740 666e0f0640c270fa9ef3f03c142d023f 530 Pfam PF03313 Serine dehydratase alpha chain 259 514 3.1E-47 T 31-10-2018 IPR005130 Serine dehydratase-like, alpha subunit DY252_13740 666e0f0640c270fa9ef3f03c142d023f 530 SUPERFAMILY SSF143548 20 148 1.75E-7 T 31-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DY252_06045 5f1f1b7bb5efbe76264a08bfcc5b5a02 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 321 4.8E-42 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_07360 71ba9d7e2053632712aabc21e4d1c0b3 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 247 1.3E-62 T 31-10-2018 DY252_07360 71ba9d7e2053632712aabc21e4d1c0b3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 7.4E-39 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07360 71ba9d7e2053632712aabc21e4d1c0b3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 7.4E-39 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07360 71ba9d7e2053632712aabc21e4d1c0b3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.4E-39 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07360 71ba9d7e2053632712aabc21e4d1c0b3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 7.4E-39 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07360 71ba9d7e2053632712aabc21e4d1c0b3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 7.4E-39 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07360 71ba9d7e2053632712aabc21e4d1c0b3 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.4E-39 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07360 71ba9d7e2053632712aabc21e4d1c0b3 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.9E-5 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07360 71ba9d7e2053632712aabc21e4d1c0b3 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.9E-5 T 31-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DY252_07360 71ba9d7e2053632712aabc21e4d1c0b3 254 SUPERFAMILY SSF51735 4 250 6.25E-78 T 31-10-2018 IPR036291 NAD(P)-binding domain superfamily DY252_07360 71ba9d7e2053632712aabc21e4d1c0b3 254 Gene3D G3DSA:3.40.50.720 2 252 1.2E-78 T 31-10-2018 DY252_05430 7ec73bdfaeef4aa4aa53001eb1a77d8a 322 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 9 321 49.267 T 31-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 DY252_05430 7ec73bdfaeef4aa4aa53001eb1a77d8a 322 Gene3D G3DSA:3.90.420.10 63 322 8.1E-95 T 31-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DY252_05430 7ec73bdfaeef4aa4aa53001eb1a77d8a 322 Pfam PF00174 Oxidoreductase molybdopterin binding domain 104 259 2.8E-27 T 31-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 DY252_05430 7ec73bdfaeef4aa4aa53001eb1a77d8a 322 SUPERFAMILY SSF56524 75 315 6.93E-80 T 31-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DY252_17900 f62a9b2b6c20bbe66e07fd7927ca27a2 313 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 30 7.6E-5 T 31-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DY252_17900 f62a9b2b6c20bbe66e07fd7927ca27a2 313 Pfam PF00248 Aldo/keto reductase family 56 303 3.7E-27 T 31-10-2018 IPR023210 NADP-dependent oxidoreductase domain DY252_17900 f62a9b2b6c20bbe66e07fd7927ca27a2 313 Gene3D G3DSA:3.20.20.100 44 309 5.5E-43 T 31-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DY252_17900 f62a9b2b6c20bbe66e07fd7927ca27a2 313 SUPERFAMILY SSF51430 45 302 8.38E-49 T 31-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DY252_07765 a2ee6c88b14e7fa6f3dc716547656c28 305 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 11 267 9.2E-42 T 31-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system DY252_11200 3ca7f8a690caafbe0eb1e40da85057a6 92 SUPERFAMILY SSF55174 10 89 6.41E-9 T 31-10-2018 DY252_11200 3ca7f8a690caafbe0eb1e40da85057a6 92 Gene3D G3DSA:3.10.290.10 3 78 1.1E-8 T 31-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DY252_00810 3d400106556f98f12f47fd81caf6732e 360 Pfam PF12849 PBP superfamily domain 37 319 4.2E-37 T 31-10-2018 IPR024370 PBP domain DY252_00810 3d400106556f98f12f47fd81caf6732e 360 SUPERFAMILY SSF53850 36 352 7.96E-57 T 31-10-2018 DY252_00810 3d400106556f98f12f47fd81caf6732e 360 Gene3D G3DSA:3.40.190.10 45 326 6.1E-47 T 31-10-2018 DY252_00810 3d400106556f98f12f47fd81caf6732e 360 Gene3D G3DSA:3.40.190.10 130 299 6.1E-47 T 31-10-2018 DY252_09350 b3b2c8ddeb510f282d0776707a4ceb29 549 Gene3D G3DSA:1.20.1250.20 279 517 1.4E-8 T 31-10-2018 DY252_09350 b3b2c8ddeb510f282d0776707a4ceb29 549 SUPERFAMILY SSF103473 11 513 7.46E-58 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_09350 b3b2c8ddeb510f282d0776707a4ceb29 549 Gene3D G3DSA:1.20.1720.10 26 257 8.8E-41 T 31-10-2018 DY252_09350 b3b2c8ddeb510f282d0776707a4ceb29 549 Pfam PF07690 Major Facilitator Superfamily 34 420 1.0E-40 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_08210 9135209c8b55ae56f0eda3d5cb60bebf 284 Pfam PF12570 Protein of unknown function (DUF3750) 64 192 7.5E-51 T 31-10-2018 IPR022224 Protein of unknown function DUF3750 DY252_00255 fddb7fb236aa76ccab95e86fc896fd0c 112 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 20 106 9.2E-15 T 31-10-2018 IPR009241 Toxin HigB-like DY252_14610 5a660fcf2bd010f1e799232cdc5d23b6 426 PIRSF PIRSF006066 1 426 2.5E-120 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_14610 5a660fcf2bd010f1e799232cdc5d23b6 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 417 2.2E-99 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_14610 5a660fcf2bd010f1e799232cdc5d23b6 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 422 1.3E-116 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_01655 7ac28155a62ab8b921bb4901abae78e5 173 Pfam PF12100 Domain of unknown function (DUF3576) 66 166 2.0E-42 T 31-10-2018 IPR021959 Protein of unknown function DUF3576 DY252_07930 ca3d01b8c1913861ba4c7e385b951cfc 182 Pfam PF13302 Acetyltransferase (GNAT) domain 8 143 1.4E-24 T 31-10-2018 IPR000182 GNAT domain DY252_07930 ca3d01b8c1913861ba4c7e385b951cfc 182 SUPERFAMILY SSF55729 4 153 3.67E-35 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_07930 ca3d01b8c1913861ba4c7e385b951cfc 182 Gene3D G3DSA:3.40.630.30 4 176 6.8E-37 T 31-10-2018 DY252_07655 3a4c47f9fc92a030b731c93ebe7b0806 311 Pfam PF10686 Protein of unknown function (DUF2493) 194 260 2.2E-27 T 31-10-2018 IPR019627 Mycobacteriophage D29, Gp61 DY252_15640 1dbaaf0c10f76b2278d164206c711d25 312 Gene3D G3DSA:3.40.190.10 15 278 2.6E-71 T 31-10-2018 DY252_15640 1dbaaf0c10f76b2278d164206c711d25 312 Pfam PF13343 Bacterial extracellular solute-binding protein 62 282 2.4E-29 T 31-10-2018 DY252_15640 1dbaaf0c10f76b2278d164206c711d25 312 Gene3D G3DSA:3.40.190.10 116 290 2.6E-71 T 31-10-2018 DY252_15640 1dbaaf0c10f76b2278d164206c711d25 312 PIRSF PIRSF002825 3 309 3.5E-61 T 31-10-2018 IPR026045 Ferric binding protein DY252_15640 1dbaaf0c10f76b2278d164206c711d25 312 SUPERFAMILY SSF53850 8 298 4.78E-68 T 31-10-2018 DY252_16990 e211280cb501558872aaf8f412758c84 508 Gene3D G3DSA:3.40.630.30 159 307 8.2E-12 T 31-10-2018 DY252_16990 e211280cb501558872aaf8f412758c84 508 SUPERFAMILY SSF55729 188 295 7.33E-9 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_10420 66ce815fe82c7b5f269f9e77f007451b 100 Pfam PF13670 Peptidase propeptide and YPEB domain 18 98 2.1E-26 T 31-10-2018 IPR025711 PepSY domain DY252_10400 b06fe927388fe8888bb2e1257351b66c 491 Pfam PF00805 Pentapeptide repeats (8 copies) 191 229 4.6E-9 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_10400 b06fe927388fe8888bb2e1257351b66c 491 Pfam PF00805 Pentapeptide repeats (8 copies) 297 332 1.4E-8 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_10400 b06fe927388fe8888bb2e1257351b66c 491 Pfam PF00805 Pentapeptide repeats (8 copies) 232 270 1.6E-11 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_10400 b06fe927388fe8888bb2e1257351b66c 491 Pfam PF00805 Pentapeptide repeats (8 copies) 411 450 8.7E-12 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_10400 b06fe927388fe8888bb2e1257351b66c 491 Pfam PF00805 Pentapeptide repeats (8 copies) 152 189 6.0E-6 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_10400 b06fe927388fe8888bb2e1257351b66c 491 Pfam PF00805 Pentapeptide repeats (8 copies) 336 373 1.5E-6 T 31-10-2018 IPR001646 Pentapeptide repeat DY252_10400 b06fe927388fe8888bb2e1257351b66c 491 Gene3D G3DSA:2.160.20.100 250 335 6.9E-22 T 31-10-2018 DY252_10400 b06fe927388fe8888bb2e1257351b66c 491 SUPERFAMILY SSF141571 333 451 1.44E-26 T 31-10-2018 DY252_10400 b06fe927388fe8888bb2e1257351b66c 491 Gene3D G3DSA:2.160.20.80 118 249 2.3E-24 T 31-10-2018 DY252_10400 b06fe927388fe8888bb2e1257351b66c 491 Gene3D G3DSA:2.160.20.80 336 467 1.6E-26 T 31-10-2018 DY252_10400 b06fe927388fe8888bb2e1257351b66c 491 SUPERFAMILY SSF141571 212 357 2.88E-37 T 31-10-2018 DY252_02940 058aaca1700e6a127d3e70f39c181a61 682 Pfam PF00999 Sodium/hydrogen exchanger family 14 388 3.8E-51 T 31-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DY252_02940 058aaca1700e6a127d3e70f39c181a61 682 Gene3D G3DSA:1.20.1530.20 6 392 4.5E-17 T 31-10-2018 IPR038770 Sodium/solute symporter superfamily DY252_19390 69df550e540b48c7b0f814fb4441d396 349 SUPERFAMILY SSF51430 1 320 1.01E-93 T 31-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DY252_19390 69df550e540b48c7b0f814fb4441d396 349 PRINTS PR00069 Aldo-keto reductase signature 142 159 6.0E-5 T 31-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DY252_19390 69df550e540b48c7b0f814fb4441d396 349 PRINTS PR00069 Aldo-keto reductase signature 111 129 6.0E-5 T 31-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DY252_19390 69df550e540b48c7b0f814fb4441d396 349 Gene3D G3DSA:3.20.20.100 1 339 7.6E-117 T 31-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DY252_19390 69df550e540b48c7b0f814fb4441d396 349 Pfam PF00248 Aldo/keto reductase family 16 317 1.9E-68 T 31-10-2018 IPR023210 NADP-dependent oxidoreductase domain DY252_01240 d66416e682370fafdc8943d66ed220aa 417 Pfam PF01522 Polysaccharide deacetylase 163 290 2.9E-28 T 31-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DY252_01240 d66416e682370fafdc8943d66ed220aa 417 Gene3D G3DSA:3.20.20.370 102 323 1.6E-57 T 31-10-2018 DY252_01240 d66416e682370fafdc8943d66ed220aa 417 SUPERFAMILY SSF88713 126 298 1.19E-37 T 31-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DY252_16800 2eb58468317c90c81c2cae5d0632d861 212 Pfam PF03729 Short repeat of unknown function (DUF308) 49 118 4.5E-10 T 31-10-2018 IPR005325 Protein of unknown function DUF308, membrane DY252_16800 2eb58468317c90c81c2cae5d0632d861 212 Pfam PF03729 Short repeat of unknown function (DUF308) 104 173 6.3E-9 T 31-10-2018 IPR005325 Protein of unknown function DUF308, membrane DY252_20630 52ad2c6c8f4da2c64986afff37561708 275 Gene3D G3DSA:1.10.3720.10 59 268 2.8E-15 T 31-10-2018 IPR035906 MetI-like superfamily DY252_20630 52ad2c6c8f4da2c64986afff37561708 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 264 8.4E-24 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_20630 52ad2c6c8f4da2c64986afff37561708 275 SUPERFAMILY SSF161098 64 264 7.85E-20 T 31-10-2018 IPR035906 MetI-like superfamily DY252_19915 eab3d0515ae8188287feb605ec877e31 172 Pfam PF05751 FixH 23 161 1.3E-25 T 31-10-2018 IPR008620 Nitrogen fixation protein FixH DY252_17730 cc95520e438150291946287fbd474555 244 Pfam PF03741 Integral membrane protein TerC family 16 203 3.5E-48 T 31-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 DY252_16815 058ac0f97e54e6018db72aa4a2849b97 167 Pfam PF11162 Protein of unknown function (DUF2946) 39 164 2.3E-7 T 31-10-2018 IPR021333 Protein of unknown function DUF2946 DY252_05740 a45cdfb3e1f7eba9fd11d39d8424a44e 64 Pfam PF16080 Bacteriophage holin family HP1 3 55 1.8E-10 T 31-10-2018 IPR032118 Bacteriophage holin HP1 family DY252_10580 926ab5313229b64f86ff13c8f5106eb2 197 SMART SM00867 30 194 1.4E-65 T 31-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DY252_10580 926ab5313229b64f86ff13c8f5106eb2 197 Gene3D G3DSA:2.40.128.110 29 197 3.9E-56 T 31-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DY252_10580 926ab5313229b64f86ff13c8f5106eb2 197 SUPERFAMILY SSF101874 27 196 4.05E-58 T 31-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DY252_10580 926ab5313229b64f86ff13c8f5106eb2 197 Pfam PF04264 YceI-like domain 31 193 4.6E-45 T 31-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DY252_05365 40ba519d286785cf6f6c8c4964bb6d78 321 SUPERFAMILY SSF144091 13 218 1.96E-40 T 31-10-2018 DY252_05365 40ba519d286785cf6f6c8c4964bb6d78 321 Pfam PF01694 Rhomboid family 73 218 2.8E-36 T 31-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 DY252_05365 40ba519d286785cf6f6c8c4964bb6d78 321 Gene3D G3DSA:1.20.1540.10 13 215 2.8E-25 T 31-10-2018 IPR035952 Rhomboid-like superfamily DY252_06760 e83a3e088aec10c842fdaca54b34c0dc 463 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 25 458 2.2E-91 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_06760 e83a3e088aec10c842fdaca54b34c0dc 463 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 16 453 7.6E-78 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_04530 f39dbd31a763013af16dcd4c9f09b045 357 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 332 4.9E-41 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_18710 17b683bda8f7ba3407a8ab2f9c31c416 427 PIRSF PIRSF006066 3 427 3.7E-115 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_18710 17b683bda8f7ba3407a8ab2f9c31c416 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 417 1.4E-99 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_18710 17b683bda8f7ba3407a8ab2f9c31c416 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 422 2.1E-101 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_05820 1c7ff85e01c55a6744a19a6a0c09efcc 492 SUPERFAMILY SSF56672 8 212 1.41E-24 T 31-10-2018 DY252_02335 7c507878768f2666d73dd1d4aab5b8bf 349 SUPERFAMILY SSF81345 7 340 5.62E-75 T 31-10-2018 IPR037294 ABC transporter, BtuC-like DY252_02335 7c507878768f2666d73dd1d4aab5b8bf 349 Gene3D G3DSA:1.10.3470.10 6 347 2.8E-96 T 31-10-2018 IPR037294 ABC transporter, BtuC-like DY252_02335 7c507878768f2666d73dd1d4aab5b8bf 349 Pfam PF01032 FecCD transport family 20 340 5.8E-81 T 31-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DY252_15145 98da4521cd2ae866f09c2be37ce4eea7 138 Pfam PF07370 Protein of unknown function (DUF1489) 5 138 2.8E-50 T 31-10-2018 IPR008320 Uncharacterised conserved protein UCP032025 DY252_15145 98da4521cd2ae866f09c2be37ce4eea7 138 PIRSF PIRSF032025 1 138 2.4E-49 T 31-10-2018 IPR008320 Uncharacterised conserved protein UCP032025 DY252_19680 81b509329a311f28cd84f62c33665b64 335 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 52 278 1.7E-40 T 31-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 DY252_19680 81b509329a311f28cd84f62c33665b64 335 Gene3D G3DSA:3.40.50.2300 139 324 4.2E-64 T 31-10-2018 DY252_19680 81b509329a311f28cd84f62c33665b64 335 Gene3D G3DSA:3.40.50.2300 39 294 4.2E-64 T 31-10-2018 DY252_11760 2499f8e4e2b04d4b06f6bb8ef320ecbc 392 Pfam PF07690 Major Facilitator Superfamily 252 382 1.4E-11 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_11760 2499f8e4e2b04d4b06f6bb8ef320ecbc 392 SUPERFAMILY SSF103473 9 383 5.1E-28 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_11760 2499f8e4e2b04d4b06f6bb8ef320ecbc 392 Gene3D G3DSA:1.20.1250.20 5 383 5.0E-20 T 31-10-2018 DY252_13960 a8ccd123ed77af490f8fa49518bec7b3 125 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 1 114 3.1E-51 T 31-10-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 DY252_13960 a8ccd123ed77af490f8fa49518bec7b3 125 SUPERFAMILY SSF69118 1 112 1.67E-30 T 31-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DY252_13960 a8ccd123ed77af490f8fa49518bec7b3 125 Gene3D G3DSA:1.20.1290.10 1 118 3.1E-33 T 31-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DY252_13960 a8ccd123ed77af490f8fa49518bec7b3 125 Pfam PF02627 Carboxymuconolactone decarboxylase family 27 108 1.3E-19 T 31-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DY252_19025 9d31a7aa10cfd8f51ff8ea3bb5279099 392 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 314 7.9E-34 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_21080 84f790bfd3053e9f69d07c9ac27df4f2 391 Pfam PF10134 Replication initiator protein A 27 256 8.9E-96 T 31-10-2018 IPR018777 Replication initiator protein A DY252_13925 099b634612bb46a4cabc123fda8b4b79 160 SUPERFAMILY SSF55729 1 156 2.03E-30 T 31-10-2018 IPR016181 Acyl-CoA N-acyltransferase DY252_13925 099b634612bb46a4cabc123fda8b4b79 160 Pfam PF13673 Acetyltransferase (GNAT) domain 30 151 1.0E-16 T 31-10-2018 IPR000182 GNAT domain DY252_13925 099b634612bb46a4cabc123fda8b4b79 160 Gene3D G3DSA:3.40.630.30 1 159 8.4E-36 T 31-10-2018 DY252_18075 545aab28a6efd0a3d734343f93c942ba 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 127 310 1.3E-28 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_18075 545aab28a6efd0a3d734343f93c942ba 311 Gene3D G3DSA:1.10.3720.10 99 306 1.6E-22 T 31-10-2018 IPR035906 MetI-like superfamily DY252_18075 545aab28a6efd0a3d734343f93c942ba 311 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 28 80 9.2E-14 T 31-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DY252_18075 545aab28a6efd0a3d734343f93c942ba 311 SUPERFAMILY SSF161098 104 291 3.27E-27 T 31-10-2018 IPR035906 MetI-like superfamily DY252_19360 b9ed4c1015e9b9ce59ff79ef13454bf5 315 Pfam PF02653 Branched-chain amino acid transport system / permease component 28 294 7.4E-26 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_07310 4900b26b6e018818d11778c166d474fa 297 Pfam PF13852 Protein of unknown function (DUF4197) 96 293 3.9E-64 T 31-10-2018 IPR025245 Protein of unknown function DUF4197 DY252_16855 5182af16b07bab3cbf4683fb01969b30 391 Pfam PF11294 Protein of unknown function (DUF3095) 5 375 3.1E-126 T 31-10-2018 IPR021445 Protein of unknown function DUF3095 DY252_12075 dd275c96dcedf58bdc6a8292ec8bcde5 204 Pfam PF10691 Protein of unknown function (DUF2497) 124 198 3.4E-26 T 31-10-2018 IPR019632 Protein of unknown function DUF2497 DY252_20405 96afddfcdc7bb76db61292f4f7f25fcc 277 Pfam PF07103 Protein of unknown function (DUF1365) 13 255 2.8E-68 T 31-10-2018 IPR010775 Protein of unknown function DUF1365 DY252_21245 49ed286836392c3ad9d984c4a64d9c15 260 Pfam PF07505 Protein of unknown function (DUF5131) 3 253 7.2E-99 T 31-10-2018 IPR011101 Protein of unknown function DUF5131 DY252_00110 0144c3ec92c653082c204fece35e2d24 731 SUPERFAMILY SSF53448 512 714 1.04E-9 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_00110 0144c3ec92c653082c204fece35e2d24 731 Gene3D G3DSA:3.90.550.10 508 697 4.0E-8 T 31-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DY252_00280 d8996f53837dfdc65a815ec30c4680c6 687 Pfam PF10592 AIPR protein 240 555 2.2E-80 T 31-10-2018 IPR018891 Abortive bacteriophage infection, resistance DY252_10710 69e17472e30ba55312bff7503ecf62a8 164 Pfam PF00072 Response regulator receiver domain 13 126 1.8E-21 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_10710 69e17472e30ba55312bff7503ecf62a8 164 Gene3D G3DSA:3.40.50.2300 4 138 1.2E-24 T 31-10-2018 DY252_10710 69e17472e30ba55312bff7503ecf62a8 164 SMART SM00448 10 126 2.1E-21 T 31-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DY252_10710 69e17472e30ba55312bff7503ecf62a8 164 SUPERFAMILY SSF52172 8 137 7.12E-29 T 31-10-2018 IPR011006 CheY-like superfamily DY252_04810 a54e01504bfeefed4dcf1190dca541c7 342 Gene3D G3DSA:2.70.70.10 50 208 1.5E-34 T 31-10-2018 IPR011055 Duplicated hybrid motif DY252_04810 a54e01504bfeefed4dcf1190dca541c7 342 Pfam PF01551 Peptidase family M23 69 187 5.4E-23 T 31-10-2018 IPR016047 Peptidase M23 DY252_04810 a54e01504bfeefed4dcf1190dca541c7 342 SUPERFAMILY SSF51261 64 188 1.1E-28 T 31-10-2018 IPR011055 Duplicated hybrid motif DY252_06655 3f5a42cbb4cac88cefbc451ae3abb47a 508 Pfam PF01384 Phosphate transporter family 73 495 3.0E-107 T 31-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 DY252_01580 300f2b7061ef601515daaba820697bf7 218 Gene3D G3DSA:2.60.120.620 1 209 1.1E-14 T 31-10-2018 DY252_02105 72239b148356d6d787dfa71befc55e15 162 SUPERFAMILY SSF56524 36 157 1.28E-14 T 31-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DY252_06755 ff3db1de206156383b021d4f9e8dcbcb 378 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 89 349 8.8E-73 T 31-10-2018 IPR019285 Protein of unknown function DUF2336 DY252_06755 ff3db1de206156383b021d4f9e8dcbcb 378 PIRSF PIRSF035865 2 369 4.0E-88 T 31-10-2018 IPR014598 Uncharacterised conserved protein UCP035865 DY252_05295 f784539e4dc3cb9489aee8edf90f3e5c 168 Pfam PF10722 Putative bacterial sensory transduction regulator 19 144 2.0E-26 T 31-10-2018 IPR019660 Putative sensory transduction regulator YbjN DY252_08860 e02fa2c8ba1446f9eeac92294a2dedd2 214 Pfam PF06532 Protein of unknown function (DUF1109) 19 214 3.7E-36 T 31-10-2018 IPR009495 Anti-sigma-F factor NrsF DY252_10030 26e9ddafb73236a9bab5562c6fed0880 113 Gene3D G3DSA:1.10.20.30 1 43 3.1E-8 T 31-10-2018 DY252_10030 26e9ddafb73236a9bab5562c6fed0880 113 Pfam PF05164 Cell division protein ZapA 4 102 4.8E-25 T 31-10-2018 IPR007838 Cell division protein ZapA-like DY252_10030 26e9ddafb73236a9bab5562c6fed0880 113 SUPERFAMILY SSF102829 3 76 3.79E-21 T 31-10-2018 IPR036192 Cell division protein ZapA-like superfamily DY252_12515 ebb2ca9eaa6e4765ea0fb79fad03b4da 212 Pfam PF11659 Protein of unknown function (DUF3261) 66 208 2.8E-27 T 31-10-2018 IPR021675 Protein of unknown function DUF3261 DY252_07465 f9c92927478f48f2c3c999e6f0208285 64 Pfam PF06698 Protein of unknown function (DUF1192) 15 63 5.2E-11 T 31-10-2018 IPR009579 Protein of unknown function DUF1192 DY252_09330 45b9414a057d4590078c14951081e609 219 SUPERFAMILY SSF161098 7 201 1.44E-48 T 31-10-2018 IPR035906 MetI-like superfamily DY252_09330 45b9414a057d4590078c14951081e609 219 Gene3D G3DSA:1.10.3720.10 3 217 1.2E-52 T 31-10-2018 IPR035906 MetI-like superfamily DY252_09330 45b9414a057d4590078c14951081e609 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 214 5.5E-24 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_05595 10b043b6465a28ee0a314634c7f2bb21 879 Pfam PF13155 Toprim-like 185 276 2.4E-11 T 31-10-2018 DY252_05595 10b043b6465a28ee0a314634c7f2bb21 879 Gene3D G3DSA:3.40.1360.10 174 288 3.8E-10 T 31-10-2018 DY252_05595 10b043b6465a28ee0a314634c7f2bb21 879 SUPERFAMILY SSF56731 177 263 1.23E-5 T 31-10-2018 DY252_08535 ca5b72a11bdc0f3e229c2cf81ad7c2c9 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 214 228 4.8E-30 T 31-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DY252_08535 ca5b72a11bdc0f3e229c2cf81ad7c2c9 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 363 379 4.8E-30 T 31-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DY252_08535 ca5b72a11bdc0f3e229c2cf81ad7c2c9 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 421 438 4.8E-30 T 31-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DY252_08535 ca5b72a11bdc0f3e229c2cf81ad7c2c9 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 243 253 4.8E-30 T 31-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DY252_08535 ca5b72a11bdc0f3e229c2cf81ad7c2c9 445 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 313 325 4.8E-30 T 31-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DY252_08535 ca5b72a11bdc0f3e229c2cf81ad7c2c9 445 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 312 323 - T 31-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 DY252_08535 ca5b72a11bdc0f3e229c2cf81ad7c2c9 445 SUPERFAMILY SSF53335 125 438 7.1E-69 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_08535 ca5b72a11bdc0f3e229c2cf81ad7c2c9 445 Pfam PF01189 16S rRNA methyltransferase RsmB/F 234 436 9.7E-45 T 31-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 DY252_08535 ca5b72a11bdc0f3e229c2cf81ad7c2c9 445 Gene3D G3DSA:3.40.50.150 131 438 4.4E-79 T 31-10-2018 DY252_12290 bbad9f4d1b8cff13d154b33f53675fd2 175 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 175 1.5E-47 T 31-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DY252_12290 bbad9f4d1b8cff13d154b33f53675fd2 175 Hamap MF_00984 Single-stranded DNA-binding protein. 5 118 35.575 T 31-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DY252_12290 bbad9f4d1b8cff13d154b33f53675fd2 175 SUPERFAMILY SSF50249 4 175 1.58E-51 T 31-10-2018 IPR012340 Nucleic acid-binding, OB-fold DY252_12290 bbad9f4d1b8cff13d154b33f53675fd2 175 Pfam PF00436 Single-strand binding protein family 5 105 4.9E-39 T 31-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 DY252_12290 bbad9f4d1b8cff13d154b33f53675fd2 175 Gene3D G3DSA:2.40.50.140 2 115 3.5E-47 T 31-10-2018 DY252_12190 79b6f9e43bf361766a0b73f92c37566d 287 Pfam PF05673 Protein of unknown function (DUF815) 34 281 4.5E-103 T 31-10-2018 IPR008533 Domain of unknown function DUF815 DY252_12190 79b6f9e43bf361766a0b73f92c37566d 287 Gene3D G3DSA:3.40.50.300 53 201 4.4E-10 T 31-10-2018 DY252_12190 79b6f9e43bf361766a0b73f92c37566d 287 SUPERFAMILY SSF52540 45 196 6.17E-20 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_15025 552797e328bb7129f9088f7851aeed15 392 Pfam PF03537 Glycoside-hydrolase family GH114 268 386 2.9E-7 T 31-10-2018 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain DY252_15025 552797e328bb7129f9088f7851aeed15 392 Gene3D G3DSA:3.20.20.70 234 391 4.5E-32 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_15025 552797e328bb7129f9088f7851aeed15 392 Gene3D G3DSA:3.20.20.70 71 225 2.7E-14 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_15025 552797e328bb7129f9088f7851aeed15 392 SUPERFAMILY SSF51445 262 389 4.84E-5 T 31-10-2018 IPR017853 Glycoside hydrolase superfamily DY252_21095 e66de6f382a2a6f056c4357e64c7e61b 89 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 17 84 6.5E-7 T 31-10-2018 IPR018754 Protein of unknown function DUF2285 DY252_21525 4daed20c1693d1af05c08b97bc24481e 264 Pfam PF09335 SNARE associated Golgi protein 95 211 1.3E-25 T 31-10-2018 IPR032816 SNARE associated Golgi protein DY252_11475 728094c756456b6cb2a9becf1a416b14 569 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 285 7.9E-12 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_11475 728094c756456b6cb2a9becf1a416b14 569 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 363 553 3.9E-9 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_11475 728094c756456b6cb2a9becf1a416b14 569 SUPERFAMILY SSF161098 26 285 6.15E-42 T 31-10-2018 IPR035906 MetI-like superfamily DY252_11475 728094c756456b6cb2a9becf1a416b14 569 SUPERFAMILY SSF161098 309 556 1.96E-40 T 31-10-2018 IPR035906 MetI-like superfamily DY252_11475 728094c756456b6cb2a9becf1a416b14 569 Gene3D G3DSA:1.10.3720.10 304 563 4.9E-36 T 31-10-2018 IPR035906 MetI-like superfamily DY252_11475 728094c756456b6cb2a9becf1a416b14 569 Gene3D G3DSA:1.10.3720.10 24 290 5.6E-47 T 31-10-2018 IPR035906 MetI-like superfamily DY252_01325 5ff1544dedf99c8afd4ab03b118de6d3 139 SUPERFAMILY SSF54593 5 132 5.78E-19 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_01325 5ff1544dedf99c8afd4ab03b118de6d3 139 Gene3D G3DSA:3.10.180.10 4 137 7.1E-33 T 31-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DY252_05410 4ecb20525773320f0504a1016ca87818 360 Gene3D G3DSA:3.40.190.10 132 343 2.3E-114 T 31-10-2018 DY252_05410 4ecb20525773320f0504a1016ca87818 360 SUPERFAMILY SSF53850 34 318 1.46E-47 T 31-10-2018 DY252_05410 4ecb20525773320f0504a1016ca87818 360 Pfam PF13416 Bacterial extracellular solute-binding protein 49 306 1.1E-16 T 31-10-2018 IPR006059 Bacterial extracellular solute-binding protein DY252_05410 4ecb20525773320f0504a1016ca87818 360 Gene3D G3DSA:3.40.190.10 34 330 2.3E-114 T 31-10-2018 DY252_20610 063d453315f5bf43eb44907615211f7d 137 SUPERFAMILY SSF52402 1 137 6.03E-18 T 31-10-2018 DY252_20610 063d453315f5bf43eb44907615211f7d 137 Pfam PF00582 Universal stress protein family 1 137 1.4E-15 T 31-10-2018 IPR006016 UspA DY252_20610 063d453315f5bf43eb44907615211f7d 137 Gene3D G3DSA:3.40.50.620 1 137 2.1E-17 T 31-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DY252_11725 1ccad31d01b61922dc78e99301175cb2 208 Pfam PF01810 LysE type translocator 15 198 1.2E-43 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_12125 8ed7e8b4b2c75d0aae667e785b341c9d 294 SUPERFAMILY SSF110997 212 293 1.83E-8 T 31-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DY252_12125 8ed7e8b4b2c75d0aae667e785b341c9d 294 Pfam PF05036 Sporulation related domain 211 293 6.4E-13 T 31-10-2018 IPR007730 Sporulation-like domain GO:0042834 DY252_21090 e3a82f3127b7a7528a8010aee28d8bd1 139 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 31 134 6.7E-28 T 31-10-2018 IPR018754 Protein of unknown function DUF2285 DY252_15260 6a5b01bfe500ce2c53af8822be563b21 312 Pfam PF09991 Predicted membrane protein (DUF2232) 16 292 3.3E-18 T 31-10-2018 IPR018710 Protein of unknown function DUF2232 DY252_18785 0e116010b21bde5cd0d52a30ca7e67ac 385 Gene3D G3DSA:3.40.190.10 173 343 1.4E-100 T 31-10-2018 DY252_18785 0e116010b21bde5cd0d52a30ca7e67ac 385 PIRSF PIRSF039026 13 377 3.8E-129 T 31-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like DY252_18785 0e116010b21bde5cd0d52a30ca7e67ac 385 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 55 335 6.7E-35 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_18785 0e116010b21bde5cd0d52a30ca7e67ac 385 Gene3D G3DSA:3.40.190.170 52 356 1.4E-100 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_19735 de23d2bebde45475cb9bbbaaf0e87523 208 Pfam PF14091 Domain of unknown function (DUF4269) 40 191 1.6E-50 T 31-10-2018 IPR025365 Protein of unknown function DUF4269 DY252_20960 b395412001b19229a0b8637cb2cff2cb 110 Pfam PF04956 TrbC/VIRB2 family 7 100 2.6E-24 T 31-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 DY252_07910 08cf4fb43abcff0cdeef0ab5b7d41f41 244 Pfam PF01925 Sulfite exporter TauE/SafE 9 233 5.2E-16 T 31-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DY252_10220 c8418d04bcee678012fc75f118bd9708 449 Pfam PF00120 Glutamine synthetase, catalytic domain 113 444 9.8E-105 T 31-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_10220 c8418d04bcee678012fc75f118bd9708 449 SUPERFAMILY SSF55931 113 446 1.47E-106 T 31-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DY252_10220 c8418d04bcee678012fc75f118bd9708 449 SMART SM01230 112 368 3.6E-106 T 31-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_10220 c8418d04bcee678012fc75f118bd9708 449 SUPERFAMILY SSF54368 3 111 3.4E-20 T 31-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_10220 c8418d04bcee678012fc75f118bd9708 449 Gene3D G3DSA:3.30.590.10 115 447 4.7E-103 T 31-10-2018 DY252_10220 c8418d04bcee678012fc75f118bd9708 449 Gene3D G3DSA:3.10.20.70 1 113 3.0E-9 T 31-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DY252_16045 3bcec93e3b071c51829f051363386cdd 290 SUPERFAMILY SSF161098 51 275 8.11E-47 T 31-10-2018 IPR035906 MetI-like superfamily DY252_16045 3bcec93e3b071c51829f051363386cdd 290 Gene3D G3DSA:1.10.3720.10 46 285 7.0E-49 T 31-10-2018 IPR035906 MetI-like superfamily DY252_16045 3bcec93e3b071c51829f051363386cdd 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 276 2.7E-17 T 31-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DY252_10570 b299759d5b6a46a53db27c096c1c0d38 149 Pfam PF09923 Uncharacterized protein conserved in bacteria (DUF2155) 32 125 2.0E-33 T 31-10-2018 IPR019225 Protein of unknown function DUF2155 DY252_21105 37dc2690f42c2a184c75d3f84c2fc733 107 Pfam PF05284 Protein of unknown function (DUF736) 3 101 1.0E-33 T 31-10-2018 IPR007948 Protein of unknown function DUF736 DY252_08500 05c36293512e2d67bc464b33350d7a8f 121 Gene3D G3DSA:3.90.1590.10 1 87 5.9E-12 T 31-10-2018 DY252_08500 05c36293512e2d67bc464b33350d7a8f 121 SUPERFAMILY SSF51316 2 113 1.88E-33 T 31-10-2018 IPR011057 Mss4-like superfamily DY252_08500 05c36293512e2d67bc464b33350d7a8f 121 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 102 1.2E-16 T 31-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 DY252_14140 3727c07cdd8e3344e614ce2c6cd0b370 405 Gene3D G3DSA:1.20.1250.20 19 395 1.4E-44 T 31-10-2018 DY252_14140 3727c07cdd8e3344e614ce2c6cd0b370 405 SUPERFAMILY SSF103473 7 395 6.93E-57 T 31-10-2018 IPR036259 MFS transporter superfamily DY252_14140 3727c07cdd8e3344e614ce2c6cd0b370 405 Pfam PF07690 Major Facilitator Superfamily 31 341 7.7E-33 T 31-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DY252_04650 000f88030d59029d958fdee705abc988 492 Pfam PF01435 Peptidase family M48 73 257 1.0E-34 T 31-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DY252_04650 000f88030d59029d958fdee705abc988 492 Gene3D G3DSA:3.30.2010.10 65 150 1.9E-7 T 31-10-2018 DY252_05565 161cb3e1bd59febf716dc52f182546d4 319 Pfam PF00589 Phage integrase family 161 301 6.2E-9 T 31-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DY252_05565 161cb3e1bd59febf716dc52f182546d4 319 Gene3D G3DSA:1.10.443.10 143 317 5.4E-13 T 31-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DY252_05565 161cb3e1bd59febf716dc52f182546d4 319 SUPERFAMILY SSF56349 87 302 4.41E-28 T 31-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DY252_21660 63dde34b67224e3971fa8202c1695785 62 Pfam PF06945 Protein of unknown function (DUF1289) 5 52 5.9E-19 T 31-10-2018 IPR010710 Protein of unknown function DUF1289 DY252_01445 883c74aca0383135f0625648671fe975 232 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 70 223 1.8E-28 T 31-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like DY252_01445 883c74aca0383135f0625648671fe975 232 SUPERFAMILY SSF89392 59 224 6.67E-31 T 31-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX DY252_01445 883c74aca0383135f0625648671fe975 232 ProSitePatterns PS00782 Transcription factor TFIIB repeat signature. 16 31 - T 31-10-2018 IPR023486 Transcription factor TFIIB, conserved site Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-674695|Reactome: R-HSA-6807505|Reactome: R-HSA-73776|Reactome: R-HSA-73779|Reactome: R-HSA-75953|Reactome: R-HSA-76042 DY252_01445 883c74aca0383135f0625648671fe975 232 Gene3D G3DSA:2.50.20.10 57 226 3.7E-28 T 31-10-2018 DY252_18090 13065949b73f49862c7a5041cf2f0eeb 215 Pfam PF01810 LysE type translocator 15 207 4.7E-25 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_18090 13065949b73f49862c7a5041cf2f0eeb 215 PIRSF PIRSF006324 1 210 4.1E-52 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_05745 15d2e9aacb32b2036d405fa4e3dbf035 66 Gene3D G3DSA:3.10.350.10 1 66 1.6E-21 T 31-10-2018 IPR036779 LysM domain superfamily DY252_05745 15d2e9aacb32b2036d405fa4e3dbf035 66 Pfam PF05489 Phage Tail Protein X 3 58 6.0E-21 T 31-10-2018 IPR008861 Phage Tail Protein X-like DY252_11910 0903d9fe83c34f58e51ae282e810f902 118 Pfam PF09656 Putative transmembrane protein (PGPGW) 18 56 1.8E-6 T 31-10-2018 IPR019099 Uncharacterised protein family PGPGW, transmembrane DY252_08775 41fd78e4802bf450caa680a961f99650 231 Pfam PF06226 Protein of unknown function (DUF1007) 22 191 5.6E-40 T 31-10-2018 IPR010412 Protein of unknown function DUF1007 DY252_07605 e6495a6ee6c7d255e5499db7141a7e8f 184 Gene3D G3DSA:3.40.50.360 2 181 2.8E-40 T 31-10-2018 IPR029039 Flavoprotein-like superfamily DY252_07605 e6495a6ee6c7d255e5499db7141a7e8f 184 SUPERFAMILY SSF52218 5 165 1.71E-28 T 31-10-2018 IPR029039 Flavoprotein-like superfamily DY252_07605 e6495a6ee6c7d255e5499db7141a7e8f 184 Pfam PF03358 NADPH-dependent FMN reductase 5 144 4.5E-29 T 31-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DY252_01280 52797cf5fc95312c450ff4b551da86b7 147 Pfam PF10947 Protein of unknown function (DUF2628) 22 94 6.4E-12 T 31-10-2018 IPR024399 Protein of unknown function DUF2628 DY252_01025 fea4927132a6b4a66e4a9f361de2d58d 94 Pfam PF03795 YCII-related domain 1 80 1.3E-9 T 31-10-2018 IPR005545 YCII-related DY252_01025 fea4927132a6b4a66e4a9f361de2d58d 94 SUPERFAMILY SSF54909 1 83 4.83E-15 T 31-10-2018 IPR011008 Dimeric alpha-beta barrel DY252_20605 3d42a3e4f508db120ed58f72bb03658a 556 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 45 540 3.8E-178 T 31-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DY252_20605 3d42a3e4f508db120ed58f72bb03658a 556 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 84 541 2.0E-137 T 31-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DY252_05230 15c87a9c700ca7dc55585142cfd5741d 317 SUPERFAMILY SSF53850 85 286 7.19E-7 T 31-10-2018 DY252_17480 575850914d0d06a00a70b5941298e1e8 128 Pfam PF04347 Flagellar biosynthesis protein, FliO 26 83 5.0E-6 T 31-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 DY252_20470 74b05cecdb3096148368abc3a58bced6 588 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 101 540 1.3E-80 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_20470 74b05cecdb3096148368abc3a58bced6 588 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 15 585 1.1E-140 T 31-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ DY252_07250 2ce32d1ae8fa84e241a84711984286b6 342 SUPERFAMILY SSF51412 24 338 5.19E-52 T 31-10-2018 DY252_07250 2ce32d1ae8fa84e241a84711984286b6 342 Pfam PF03060 Nitronate monooxygenase 97 331 8.6E-34 T 31-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 DY252_07250 2ce32d1ae8fa84e241a84711984286b6 342 Gene3D G3DSA:3.20.20.70 21 342 1.7E-85 T 31-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DY252_15790 c7a02ca98f44c88576ffaaa324eebdfb 462 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 432 8.2E-165 T 31-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DY252_15790 c7a02ca98f44c88576ffaaa324eebdfb 462 PIRSF PIRSF006446 1 458 5.6E-205 T 31-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DY252_00100 c3208434c220c2a5d4f1f77aec57db31 396 Pfam PF04230 Polysaccharide pyruvyl transferase 36 321 1.8E-20 T 31-10-2018 IPR007345 Polysaccharide pyruvyl transferase DY252_20255 381b5f228017fb3e25bd3ee589c77bc5 229 Pfam PF04340 Protein of unknown function, DUF484 2 224 1.3E-29 T 31-10-2018 IPR007435 Protein of unknown function DUF484 DY252_20255 381b5f228017fb3e25bd3ee589c77bc5 229 Gene3D G3DSA:3.30.450.40 44 227 1.2E-28 T 31-10-2018 IPR029016 GAF-like domain superfamily DY252_08465 4dff5d16525cca92154ba1cfe0f34adb 207 Pfam PF01810 LysE type translocator 16 206 5.2E-25 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_08465 4dff5d16525cca92154ba1cfe0f34adb 207 PIRSF PIRSF006324 1 207 6.4E-44 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_20045 3905bc947c1af69a5a51136ef187254d 412 Pfam PF06224 Winged helix DNA-binding domain 48 371 6.2E-69 T 31-10-2018 IPR009351 Protein of unknown function DUF1006 DY252_21835 a04a7b63ab70b6e4b2d2d1a19c24d0a5 109 Gene3D G3DSA:2.60.120.10 8 109 1.1E-5 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_21835 a04a7b63ab70b6e4b2d2d1a19c24d0a5 109 SUPERFAMILY SSF51182 27 106 1.26E-9 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_10990 a696270ee3ddc7c89659a3c3794482d6 264 Pfam PF01618 MotA/TolQ/ExbB proton channel family 124 218 1.6E-18 T 31-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DY252_10990 a696270ee3ddc7c89659a3c3794482d6 264 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 191 208 - T 31-10-2018 IPR000540 Flagellar motor protein MotA, conserved site DY252_11090 af3ca32baf3395addec78c08ce1f1c60 148 Gene3D G3DSA:2.60.120.1140 28 147 7.0E-42 T 31-10-2018 IPR038695 Saro_0823-like superfamily DY252_11090 af3ca32baf3395addec78c08ce1f1c60 148 Pfam PF02643 Uncharacterized ACR, COG1430 42 144 5.6E-29 T 31-10-2018 IPR003795 Protein of unknown function DUF192 DY252_02540 fba32e375233a573b58f867d79605259 633 SUPERFAMILY SSF52540 29 194 3.05E-7 T 31-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DY252_02540 fba32e375233a573b58f867d79605259 633 Gene3D G3DSA:3.40.50.300 12 201 9.8E-10 T 31-10-2018 DY252_02540 fba32e375233a573b58f867d79605259 633 Pfam PF13401 AAA domain 28 175 3.0E-6 T 31-10-2018 IPR003593 AAA+ ATPase domain DY252_13875 9b24182d6608d094e3e6c86fd92e1ee9 173 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 36 158 1.6E-24 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_06585 304d23be8d0bc55db3a3d23106db51ef 324 Gene3D G3DSA:3.40.190.170 25 324 2.3E-87 T 31-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DY252_06585 304d23be8d0bc55db3a3d23106db51ef 324 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 34 303 5.0E-35 T 31-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DY252_14970 ca6fad2ce764248d0db71c882f68e7ef 480 Pfam PF09361 Phasin protein 376 470 4.5E-8 T 31-10-2018 IPR018968 Phasin DY252_07220 65fcf4c0979be7453f44ddba149d25b5 180 Pfam PF04945 YHS domain 58 94 1.9E-8 T 31-10-2018 IPR007029 YHS domain DY252_05620 67f6ef03809040774a6fa29d23b93f89 80 Pfam PF04606 Ogr/Delta-like zinc finger 10 55 2.5E-10 T 31-10-2018 IPR007684 Zinc finger, Ogr/Delta-type DY252_19240 73c498afa1147afc08dff565a94a002f 323 Pfam PF05598 Transposase domain (DUF772) 51 125 4.2E-21 T 31-10-2018 IPR008490 Transposase InsH, N-terminal DY252_19240 73c498afa1147afc08dff565a94a002f 323 Pfam PF01609 Transposase DDE domain 137 311 9.2E-31 T 31-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 DY252_17985 ed66596d801fa2b37115ea9dc79c48c6 200 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 49 181 8.2E-19 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_21015 2cbd6da62bcbf6dc7f06c2e94744b60c 77 Pfam PF01527 Transposase 29 66 2.0E-10 T 31-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 DY252_21015 2cbd6da62bcbf6dc7f06c2e94744b60c 77 SUPERFAMILY SSF48295 26 66 2.25E-7 T 31-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DY252_16695 2cefb9e08ab035a5a019af08f9be9685 318 Pfam PF01619 Proline dehydrogenase 54 309 1.6E-26 T 31-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 DY252_16695 2cefb9e08ab035a5a019af08f9be9685 318 SUPERFAMILY SSF51730 44 313 4.71E-49 T 31-10-2018 IPR029041 FAD-linked oxidoreductase-like DY252_16695 2cefb9e08ab035a5a019af08f9be9685 318 Gene3D G3DSA:3.20.20.530 25 317 4.4E-67 T 31-10-2018 DY252_05685 1b510296c8f4a35608b6ea411f6d8d52 298 Pfam PF12571 Phage tail-collar fibre protein 1 150 8.7E-55 T 31-10-2018 IPR022225 Phage tail fibre protein DY252_16845 7f7e6237c1588af3782fc38321e3c161 181 Gene3D G3DSA:3.40.50.150 23 176 1.0E-23 T 31-10-2018 DY252_16845 7f7e6237c1588af3782fc38321e3c161 181 SUPERFAMILY SSF53335 28 162 3.96E-18 T 31-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DY252_12785 ef4654792bffd682c2cc54271e4bbe2e 268 Pfam PF01578 Cytochrome C assembly protein 68 263 1.6E-14 T 31-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DY252_16850 ab21f012e0652b20cf6c5eaf59536cbd 72 Pfam PF04102 SlyX 7 72 5.4E-19 T 31-10-2018 IPR007236 SlyX DY252_10530 b8f921cffe876ded7a80e802032baf1e 69 Pfam PF11381 Protein of unknown function (DUF3185) 5 63 3.2E-20 T 31-10-2018 IPR021521 Protein of unknown function DUF3185 DY252_07020 723d5f04dbffb37a6a0edddd7166f2c9 63 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 4 58 6.0E-12 T 31-10-2018 IPR019201 Protein of unknown function DUF2065 DY252_12135 e022078f2c811f799debd41c786b442c 227 Pfam PF02163 Peptidase family M50 129 193 9.6E-9 T 31-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 DY252_13085 bd9053aaa26e799b2cbe732d32d9ba76 236 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 26 197 4.5E-34 T 31-10-2018 IPR018639 Domain of unknown function DUF2062 DY252_04525 3a3a7d824164c43fe2c800cbfd0f5b33 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 280 1.3E-34 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_05940 b5abe969b7784a21d8c5dabb619a5a57 325 Pfam PF01136 Peptidase family U32 77 323 7.9E-62 T 31-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DY252_13885 e41e2cc4797f836eb4f2988ec2f3766b 1478 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1135 1478 1.8E-54 T 31-10-2018 IPR007452 Translocation and assembly module TamB DY252_06640 953e6b4c0be16a9b1bc3334e4b67ff3e 278 Pfam PF09955 Predicted integral membrane protein (DUF2189) 76 199 4.6E-38 T 31-10-2018 IPR018692 Predicted integral membrane protein DUF2189 DY252_06650 66349a4c1d228ee9b28cb3db058617df 1192 Pfam PF05170 AsmA family 735 1079 1.3E-11 T 31-10-2018 IPR007844 AsmA DY252_06650 66349a4c1d228ee9b28cb3db058617df 1192 Pfam PF05170 AsmA family 2 216 5.0E-31 T 31-10-2018 IPR007844 AsmA DY252_07470 db054a4cbcafb758f4e215a86f44e2cd 148 Pfam PF07323 Protein of unknown function (DUF1465) 21 143 3.1E-20 T 31-10-2018 IPR010848 Protein of unknown function DUF1465 DY252_07470 db054a4cbcafb758f4e215a86f44e2cd 148 Gene3D G3DSA:1.10.8.930 16 145 2.4E-29 T 31-10-2018 IPR038301 AraC-like superfamily DY252_06600 5443afc705a287b7eafb520af8cdad46 1213 Pfam PF02538 Hydantoinase B/oxoprolinase 706 1212 1.6E-206 T 31-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 DY252_06600 5443afc705a287b7eafb520af8cdad46 1213 Pfam PF01968 Hydantoinase/oxoprolinase 219 506 1.2E-119 T 31-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 DY252_06600 5443afc705a287b7eafb520af8cdad46 1213 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 21 200 2.1E-61 T 31-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 DY252_09625 931f8cb8c14eea9dea9e927247334c5f 158 Pfam PF10027 Predicted integral membrane protein (DUF2269) 5 156 1.0E-28 T 31-10-2018 IPR018729 Protein of unknown function DUF2269, transmembrane DY252_20145 3813c3d881382ce3310b1a0af50808a0 345 Pfam PF03773 Predicted permease 44 341 3.4E-36 T 31-10-2018 IPR005524 Predicted permease DUF318 DY252_02850 ce022b4163f33fb7b24b2132950728de 69 Pfam PF06568 Domain of unknown function (DUF1127) 23 52 6.5E-6 T 31-10-2018 IPR009506 Protein of unknown function DUF1127 DY252_13290 1cfbffa8a28139888986c13696277097 221 Pfam PF01810 LysE type translocator 21 211 2.5E-33 T 31-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DY252_14890 7c5170da36aa95f5b8dd012435d67ce1 451 Pfam PF01435 Peptidase family M48 35 222 1.9E-29 T 31-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DY252_14890 7c5170da36aa95f5b8dd012435d67ce1 451 Gene3D G3DSA:1.25.40.10 241 402 1.9E-9 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_14890 7c5170da36aa95f5b8dd012435d67ce1 451 Gene3D G3DSA:3.30.2010.10 28 111 2.7E-6 T 31-10-2018 DY252_14890 7c5170da36aa95f5b8dd012435d67ce1 451 SUPERFAMILY SSF48452 269 395 1.14E-9 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_05635 5e002c206c34d89427f63eabed796754 242 Pfam PF08346 AntA/AntB antirepressor 20 94 1.2E-27 T 31-10-2018 IPR013557 AntA/AntB antirepressor DY252_20770 3adc709dba17733bc6cca16d6201e3a9 944 Pfam PF14449 Pre-toxin TG 410 470 1.1E-5 T 31-10-2018 IPR027797 Pre-toxin TG domain DY252_03240 9d63cd37a8323c5e842917faee288748 391 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 353 6.7E-42 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_03240 9d63cd37a8323c5e842917faee288748 391 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 50 363 2.7E-135 T 31-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC DY252_13685 4aaad016556f41561ecebd734f2f4727 113 SUPERFAMILY SSF51182 3 112 3.82E-24 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_13685 4aaad016556f41561ecebd734f2f4727 113 Gene3D G3DSA:2.60.120.10 1 98 1.7E-30 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_13685 4aaad016556f41561ecebd734f2f4727 113 Pfam PF07883 Cupin domain 32 83 5.6E-11 T 31-10-2018 IPR013096 Cupin 2, conserved barrel DY252_14250 3131f0bfcb6ad541706789e814965c1f 264 Pfam PF09836 Putative DNA-binding domain 9 95 1.6E-20 T 31-10-2018 IPR018640 Putative DNA-binding domain, bacteria DY252_20940 5113b0cf194126e28331674f0725018d 95 TIGRFAM TIGR04360 other_trbK: conjugative transfer region protein TrbK 7 81 1.5E-29 T 31-10-2018 IPR027587 Conjugative transfer region protein TrbK DY252_19250 5039affc92f90e0681acf8b7de398bf3 527 Pfam PF06527 TniQ 18 173 1.4E-13 T 31-10-2018 IPR009492 TniQ DY252_19250 5039affc92f90e0681acf8b7de398bf3 527 Pfam PF15978 Tn7-like transposition protein D 324 452 7.6E-15 T 31-10-2018 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl DY252_19250 5039affc92f90e0681acf8b7de398bf3 527 Pfam PF15978 Tn7-like transposition protein D 212 318 1.1E-10 T 31-10-2018 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl DY252_17325 4ffc7b3c2eaecf8ac5f7a1051d9d0474 89 Pfam PF11391 Protein of unknown function (DUF2798) 26 84 7.8E-16 T 31-10-2018 IPR021529 Protein of unknown function DUF2798 DY252_15710 cd13882e517111e2e4f1d46a1e6d8f22 107 Pfam PF11747 Killing trait 11 78 6.0E-26 T 31-10-2018 IPR021070 Killing trait, RebB DY252_01545 cb823f851548e3e07bbe0b3c9b0c62d8 313 SUPERFAMILY SSF53850 74 275 9.41E-17 T 31-10-2018 DY252_01545 cb823f851548e3e07bbe0b3c9b0c62d8 313 Gene3D G3DSA:3.40.190.10 79 272 7.5E-7 T 31-10-2018 DY252_01545 cb823f851548e3e07bbe0b3c9b0c62d8 313 Gene3D G3DSA:3.40.190.10 142 242 7.5E-7 T 31-10-2018 DY252_04815 c6b986a498064053d9dce135315faf64 263 Pfam PF04116 Fatty acid hydroxylase superfamily 89 223 2.3E-26 T 31-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 DY252_00660 b9af1abcf307bea24febd319ea5348ec 101 Pfam PF09538 Protein of unknown function (FYDLN_acid) 3 100 1.1E-17 T 31-10-2018 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid DY252_12850 79fa99ba38e8e85b878bfe1d451a29b1 149 Gene3D G3DSA:3.30.1450.10 31 116 1.7E-6 T 31-10-2018 IPR037873 BamE-like DY252_12850 79fa99ba38e8e85b878bfe1d451a29b1 149 Pfam PF04355 SmpA / OmlA family 32 105 9.4E-16 T 31-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 DY252_16915 f7d4b13f65476fe167e0b148f33ccccb 294 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 1 43 2.1E-12 T 31-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 DY252_00630 16b12e88f19673b83915f400aeaea85e 103 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 84 9.6E-10 T 31-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 DY252_16535 c7dd8fd933cba1341579433ce4fd5854 162 Pfam PF11351 Holin of 3TMs, for gene-transfer release 53 156 4.1E-18 T 31-10-2018 IPR021497 Holin of 3TMs, for gene-transfer release DY252_04155 e59e2eae0e47876a4e3ee042fbe28ef9 64 Pfam PF04588 Hypoxia induced protein conserved region 8 54 3.0E-14 T 31-10-2018 IPR007667 Hypoxia induced protein, domain DY252_05515 70ff4257f50e023180b213e3f8033a0f 589 Gene3D G3DSA:1.25.40.10 378 546 1.8E-9 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_05515 70ff4257f50e023180b213e3f8033a0f 589 Pfam PF01435 Peptidase family M48 139 311 6.1E-15 T 31-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DY252_05515 70ff4257f50e023180b213e3f8033a0f 589 SUPERFAMILY SSF48452 409 515 6.83E-6 T 31-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DY252_05320 3c3bda511675cd873f4b1c7b16125d5e 276 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 39 272 6.8E-64 T 31-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase DY252_05320 3c3bda511675cd873f4b1c7b16125d5e 276 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 59 262 2.2E-47 T 31-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase DY252_05320 3c3bda511675cd873f4b1c7b16125d5e 276 Gene3D G3DSA:3.60.140.10 16 275 8.0E-82 T 31-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily DY252_05320 3c3bda511675cd873f4b1c7b16125d5e 276 SUPERFAMILY SSF64438 27 273 4.73E-74 T 31-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic DY252_11990 a12ba61204ab0059b9aba9275bf4cd6a 265 Pfam PF10670 Domain of unknown function (DUF4198) 22 240 2.8E-43 T 31-10-2018 IPR019613 Protein of unknown function DUF4198 DY252_01450 2046b1a8e2214ae06376ba90a55dbc33 225 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 5 203 1.5E-23 T 31-10-2018 DY252_09985 c15b17ffd2a3907141ce184590582d73 405 Gene3D G3DSA:3.30.1330.60 299 402 2.0E-13 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_09985 c15b17ffd2a3907141ce184590582d73 405 SUPERFAMILY SSF103088 306 396 3.4E-13 T 31-10-2018 IPR036737 OmpA-like domain superfamily DY252_09985 c15b17ffd2a3907141ce184590582d73 405 Pfam PF00691 OmpA family 310 391 2.8E-11 T 31-10-2018 IPR006665 OmpA-like domain DY252_01465 fe254878d7b2b0163bf9bfe4a6300b35 187 Gene3D G3DSA:2.60.40.1880 40 184 3.5E-7 T 31-10-2018 IPR038696 Invasion protein B superfamily DY252_13405 6e4bee51ad2aa7906db057c44bf834aa 79 Pfam PF07330 Protein of unknown function (DUF1467) 1 76 4.8E-26 T 31-10-2018 IPR009935 Protein of unknown function DUF1467 DY252_17320 cbb5437a2339b7bf4aa98a2e7fcc0baf 450 Pfam PF10011 Predicted membrane protein (DUF2254) 15 395 9.2E-98 T 31-10-2018 IPR018723 Protein of unknown function DUF2254, membrane DY252_19740 914dfa479ac92f80ec8969d005cd97a2 318 Pfam PF03547 Membrane transport protein 8 145 1.8E-11 T 31-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DY252_19740 914dfa479ac92f80ec8969d005cd97a2 318 Pfam PF03547 Membrane transport protein 157 306 8.5E-11 T 31-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DY252_21070 a723fbb2bc462fa5c786c442855955d7 84 SUPERFAMILY SSF47598 38 78 2.56E-9 T 31-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 DY252_21055 45756c46756443faa71ad89b743a4952 111 Pfam PF05284 Protein of unknown function (DUF736) 3 104 2.0E-35 T 31-10-2018 IPR007948 Protein of unknown function DUF736 DY252_07960 f20d082a5953f9d0b448f61f96f8eb97 74 Pfam PF11390 NADH-dependant formate dehydrogenase delta subunit FdsD 5 63 5.9E-27 T 31-10-2018 IPR021074 Formate dehydrogenase, delta subunit DY252_05655 7318980e590b062439b2dc4eb71c5a44 104 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 22 98 1.4E-7 T 31-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative DY252_07850 5ea551f91d15261b49dc0b62962b9811 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 294 1.6E-39 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_19140 0545a6efe5c58b3e1d970088a0644f7e 431 PIRSF PIRSF006066 7 431 1.1E-98 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_19140 0545a6efe5c58b3e1d970088a0644f7e 431 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 421 1.4E-112 T 31-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DY252_19140 0545a6efe5c58b3e1d970088a0644f7e 431 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 23 427 3.7E-100 T 31-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DY252_20365 8e86c3cf6b2ec74d3aa08938720ca0bf 308 Pfam PF03547 Membrane transport protein 164 301 1.7E-7 T 31-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DY252_11305 a5f5df2c9a90e165fd2b445dfbc7c2f3 255 Pfam PF09608 Putative transmembrane protein (Alph_Pro_TM) 34 254 6.7E-80 T 31-10-2018 IPR019088 Conserved hypothetical protein CHP02186-related, transmembrane DY252_12930 26a019b54bab842dc36f2ba1a40f9b0b 307 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 291 3.0E-52 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_07455 6d02e5d5ba395f2d6940bdfbb16347ff 226 Pfam PF06242 Protein of unknown function (DUF1013) 34 170 2.0E-65 T 31-10-2018 IPR010421 Protein of unknown function DUF1013 DY252_00285 5454a22052ae726798ce40cdddf3e62c 339 Pfam PF14390 Putative PD-(D/E)XK family member, (DUF4420) 8 315 2.0E-69 T 31-10-2018 IPR025534 Putative PD-(D/E)XK family member (DUF4420) DY252_14345 8ef103c64b884a7824eb2974e280721d 100 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 20 92 2.0E-25 T 31-10-2018 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 DY252_03700 0be84e61841d52833fc412cff29b2366 336 Pfam PF06089 L-asparaginase II 12 334 2.4E-105 T 31-10-2018 IPR010349 L-asparaginase II DY252_00715 bfabfd09b52bd950b026fd445247046c 144 Pfam PF04143 Sulphur transport 46 131 4.7E-7 T 31-10-2018 IPR007272 Sulphur transport domain DY252_20070 2015a6273191d4df5359d5801b1284c0 98 Pfam PF02325 YGGT family 10 87 7.6E-23 T 31-10-2018 IPR003425 CCB3/YggT GO:0016020 DY252_07410 9231f3e4a182beb86da123502df048e3 68 Pfam PF04325 Protein of unknown function (DUF465) 15 57 3.2E-13 T 31-10-2018 IPR007420 Protein of unknown function DUF465 DY252_07410 9231f3e4a182beb86da123502df048e3 68 Gene3D G3DSA:1.20.58.660 1 62 5.5E-8 T 31-10-2018 DY252_21225 2cfb7439bcbb260e7f7cc587834c425b 260 Pfam PF08878 Domain of unknown function (DUF1837) 31 234 2.6E-21 T 31-10-2018 IPR014976 Protein of unknown function DUF1837 DY252_17220 ee9ae0efdada9743807f6062267172a9 261 Pfam PF13490 Putative zinc-finger 12 31 4.9E-5 T 31-10-2018 IPR027383 Putative zinc-finger DY252_02430 41c563e243e48b76f4650dabf8a4f0aa 504 Pfam PF09731 Mitochondrial inner membrane protein 253 491 4.1E-16 T 31-10-2018 IPR019133 Mitochondrial inner membrane protein Mitofilin Reactome: R-HSA-8949613 DY252_12545 d517dfa80b62a4239dcbd0dd6cdc29c1 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 323 5.7E-42 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_08555 6345f1c5b1507e56a74d4c14b504df94 231 Pfam PF02706 Chain length determinant protein 10 61 1.9E-10 T 31-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 DY252_01435 bfa907dcc3f0171b81041f48c52db82f 99 SUPERFAMILY SSF51182 4 96 1.07E-11 T 31-10-2018 IPR011051 RmlC-like cupin domain superfamily DY252_01435 bfa907dcc3f0171b81041f48c52db82f 99 Gene3D G3DSA:2.60.120.10 2 98 4.6E-24 T 31-10-2018 IPR014710 RmlC-like jelly roll fold DY252_11365 06b2732cbdb3886439ff190523a30577 87 Pfam PF06568 Domain of unknown function (DUF1127) 47 79 4.1E-11 T 31-10-2018 IPR009506 Protein of unknown function DUF1127 DY252_09120 90b243219d2ec83c93bfdfe28007fdeb 192 Pfam PF07386 Protein of unknown function (DUF1499) 81 183 5.6E-8 T 31-10-2018 IPR010865 Protein of unknown function DUF1499 DY252_10165 9dcd834f182d5d345fa78fb90c955aca 291 Pfam PF03547 Membrane transport protein 148 284 7.6E-14 T 31-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DY252_10165 9dcd834f182d5d345fa78fb90c955aca 291 Pfam PF03547 Membrane transport protein 7 138 1.3E-9 T 31-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DY252_21955 49fc0dfe7593e24fa7ae4d770367c597 503 Pfam PF02646 RmuC family 178 464 1.2E-92 T 31-10-2018 IPR003798 DNA recombination RmuC DY252_06590 ee8199551603a63d288b3ed39cf67769 170 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 153 1.2E-19 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_12845 740e0c3d172b5ddbc3cf7c2f0c08de96 190 Pfam PF03981 Ubiquinol-cytochrome C chaperone 34 160 7.4E-35 T 31-10-2018 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 DY252_20130 0ead47de0c68b0c716a3bd7668db614c 283 Pfam PF03591 AzlC protein 40 176 4.7E-33 T 31-10-2018 IPR011606 Branched-chain amino acid transport, permease DY252_19900 39ac14dc6b48f56cb00b2d3c60e63a9e 53 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 4 51 5.7E-12 T 31-10-2018 IPR008621 Cbb3-type cytochrome oxidase component DY252_12695 55080ec7ec0d7bb1e8defbed5ec72d7a 364 Pfam PF04143 Sulphur transport 29 340 4.7E-49 T 31-10-2018 IPR007272 Sulphur transport domain DY252_01520 6940910010e252a31e89d13e2bf83489 274 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 8 270 53.744 T 31-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein DY252_01520 6940910010e252a31e89d13e2bf83489 274 Pfam PF03618 Kinase/pyrophosphorylase 10 265 3.1E-90 T 31-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 DY252_19405 7e529ce7e45b84296e805e91073c7f12 354 Pfam PF02653 Branched-chain amino acid transport system / permease component 65 339 4.1E-40 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_16515 bf1af66155d49a4314a39b61e4f0f5ed 264 Pfam PF07505 Protein of unknown function (DUF5131) 3 253 3.4E-99 T 31-10-2018 IPR011101 Protein of unknown function DUF5131 DY252_01885 44fbabbe568e5c701f86ef38b244ed1c 247 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 132 233 2.4E-4 T 31-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related DY252_07650 2ddb5d2789b0f53d90a6e1c87d8b4875 338 Pfam PF13362 Toprim domain 228 311 8.8E-16 T 31-10-2018 IPR006171 TOPRIM domain DY252_17525 643da0bd1d589d53d48ac4f073dde74e 242 SUPERFAMILY SSF158791 172 233 1.11E-5 T 31-10-2018 DY252_21045 c93dfe7846b134cce4bc3a4140410713 584 Pfam PF11843 Protein of unknown function (DUF3363) 278 399 1.1E-32 T 31-10-2018 IPR021795 Protein of unknown function DUF3363 DY252_21045 c93dfe7846b134cce4bc3a4140410713 584 Pfam PF11843 Protein of unknown function (DUF3363) 399 582 9.9E-53 T 31-10-2018 IPR021795 Protein of unknown function DUF3363 DY252_09600 d38b995972f266e88b8032fff6d28eee 225 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 81 212 6.4E-23 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DY252_14465 930c950eaddb4c0e7dc1e2ca0b744e24 293 Pfam PF12118 SprA-related family 95 263 6.2E-12 T 31-10-2018 IPR021973 SprA-related family DY252_17265 dd66eb23fa0f3cfe63fde38d7a0f9cc7 395 Pfam PF05762 VWA domain containing CoxE-like protein 190 274 6.6E-7 T 31-10-2018 IPR008912 Uncharacterised protein family CoxE-like DY252_14660 e9213ae9cad222d278920c499b54a9c6 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 20 323 1.9E-39 T 31-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DY252_18185 403aa61eeb2f7486ef2d6971e3e41d32 80 Pfam PF07362 Post-segregation antitoxin CcdA 10 80 4.7E-26 T 31-10-2018 IPR009956 Post-segregation antitoxin CcdA DY252_08840 44ddf458734031cfd910d7e5e492403a 162 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 22 152 3.5E-30 T 31-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ