locus-tag class description IT971_00005 PF00308 Bacterial dnaA protein IT971_00005 PF08299 Bacterial dnaA protein helix-turn-helix IT971_00005 PF11638 DnaA N-terminal domain IT971_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain IT971_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain IT971_00010 PF02767 DNA polymerase III beta subunit, central domain IT971_00015 PF02463 RecF/RecN/SMC N terminal domain IT971_00020 PF01751 Toprim domain IT971_00020 PF00204 DNA gyrase B IT971_00020 PF00986 DNA gyrase B subunit, carboxyl terminus IT971_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_00025 PF14814 Bifunctional transglycosylase second domain IT971_00025 PF00905 Penicillin binding protein transpeptidase domain IT971_00025 PF00912 Transglycosylase IT971_00030 PF00912 Transglycosylase IT971_00030 PF00905 Penicillin binding protein transpeptidase domain IT971_00035 PF07687 Peptidase dimerisation domain IT971_00035 PF01546 Peptidase family M20/M25/M40 IT971_00040 PF01970 Tripartite tricarboxylate transporter TctA family IT971_00055 PF03466 LysR substrate binding domain IT971_00055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_00060 PF01810 LysE type translocator IT971_00070 PF00764 Arginosuccinate synthase IT971_00075 PF01416 tRNA pseudouridine synthase IT971_00085 PF04172 LrgB-like family IT971_00095 PF03960 ArsC family IT971_00105 PF02631 RecX family IT971_00110 PF01061 ABC-2 type transporter IT971_00115 PF00202 Aminotransferase class-III IT971_00120 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IT971_00120 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IT971_00125 PF01430 Hsp33 protein IT971_00160 PF08281 Sigma-70, region 4 IT971_00160 PF04542 Sigma-70 region 2 IT971_00170 PF00582 Universal stress protein family IT971_00175 PF00916 Sulfate permease family IT971_00175 PF01740 STAS domain IT971_00180 PF13193 AMP-binding enzyme C-terminal domain IT971_00180 PF00501 AMP-binding enzyme IT971_00180 PF16177 Acetyl-coenzyme A synthetase N-terminus IT971_00185 PF02646 RmuC family IT971_00190 PF01327 Polypeptide deformylase IT971_00200 PF02911 Formyl transferase, C-terminal domain IT971_00200 PF00551 Formyl transferase IT971_00210 PF03466 LysR substrate binding domain IT971_00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_00235 PF16868 NMT1-like family IT971_00240 PF02954 Bacterial regulatory protein, Fis family IT971_00240 PF00072 Response regulator receiver domain IT971_00240 PF00158 Sigma-54 interaction domain IT971_00245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_00245 PF00512 His Kinase A (phospho-acceptor) domain IT971_00245 PF02743 Cache domain IT971_00250 PF00486 Transcriptional regulatory protein, C terminal IT971_00250 PF00072 Response regulator receiver domain IT971_00265 PF03668 P-loop ATPase protein family IT971_00270 PF03830 PTS system sorbose subfamily IIB component IT971_00270 PF03610 PTS system fructose IIA component IT971_00275 PF00381 PTS HPr component phosphorylation site IT971_00280 PF02896 PEP-utilising enzyme, TIM barrel domain IT971_00280 PF00391 PEP-utilising enzyme, mobile domain IT971_00280 PF05524 PEP-utilising enzyme, N-terminal IT971_00285 PF05221 S-adenosyl-L-homocysteine hydrolase IT971_00285 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IT971_00310 PF02386 Cation transport protein IT971_00320 PF01966 HD domain IT971_00325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_00325 PF00512 His Kinase A (phospho-acceptor) domain IT971_00335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IT971_00335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IT971_00355 PF02623 FliW protein IT971_00360 PF00211 Adenylate and Guanylate cyclase catalytic domain IT971_00360 PF00072 Response regulator receiver domain IT971_00365 PF13545 Crp-like helix-turn-helix domain IT971_00365 PF00027 Cyclic nucleotide-binding domain IT971_00370 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_00380 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_00385 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IT971_00385 PF01488 Shikimate / quinate 5-dehydrogenase IT971_00385 PF08501 Shikimate dehydrogenase substrate binding domain IT971_00390 PF07729 FCD domain IT971_00390 PF00392 Bacterial regulatory proteins, gntR family IT971_00395 PF01261 Xylose isomerase-like TIM barrel IT971_00395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IT971_00400 PF01220 Dehydroquinase class II IT971_00410 PF02132 RecR protein IT971_00410 PF13662 Toprim domain IT971_00415 PF02575 YbaB/EbfC DNA-binding family IT971_00420 PF12170 DNA polymerase III tau subunit V interacting with alpha IT971_00420 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IT971_00420 PF12169 DNA polymerase III subunits gamma and tau domain III IT971_00430 PF09297 NADH pyrophosphatase zinc ribbon domain IT971_00430 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain IT971_00430 PF00293 NUDIX domain IT971_00445 PF08818 Domain of unknown function (DU1801) IT971_00450 PF03466 LysR substrate binding domain IT971_00450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_00455 PF13417 Glutathione S-transferase, N-terminal domain IT971_00460 PF00043 Glutathione S-transferase, C-terminal domain IT971_00460 PF13417 Glutathione S-transferase, N-terminal domain IT971_00470 PF18331 PKHD-type hydroxylase C-terminal domain IT971_00470 PF13640 2OG-Fe(II) oxygenase superfamily IT971_00475 PF07687 Peptidase dimerisation domain IT971_00475 PF01546 Peptidase family M20/M25/M40 IT971_00480 PF14602 Hexapeptide repeat of succinyl-transferase IT971_00480 PF00132 Bacterial transferase hexapeptide (six repeats) IT971_00480 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IT971_00490 PF05231 MASE1 IT971_00490 PF00563 EAL domain IT971_00495 PF01293 Phosphoenolpyruvate carboxykinase IT971_00510 PF05532 CsbD-like IT971_00520 PF00117 Glutamine amidotransferase class-I IT971_00520 PF00425 chorismate binding enzyme IT971_00520 PF04715 Anthranilate synthase component I, N terminal region IT971_00525 PF00520 Ion transport protein IT971_00525 PF00027 Cyclic nucleotide-binding domain IT971_00530 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IT971_00535 PF01209 ubiE/COQ5 methyltransferase family IT971_00540 PF03109 ABC1 family IT971_00550 PF08269 Cache domain IT971_00550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_00560 PF00156 Phosphoribosyl transferase domain IT971_00565 PF07995 Glucose / Sorbosone dehydrogenase IT971_00580 PF02386 Cation transport protein IT971_00590 PF01118 Semialdehyde dehydrogenase, NAD binding domain IT971_00590 PF02774 Semialdehyde dehydrogenase, dimerisation domain IT971_00595 PF00990 Diguanylate cyclase, GGDEF domain IT971_00600 PF00551 Formyl transferase IT971_00605 PF02386 Cation transport protein IT971_00610 PF00440 Bacterial regulatory proteins, tetR family IT971_00620 PF03352 Methyladenine glycosylase IT971_00625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_00625 PF00512 His Kinase A (phospho-acceptor) domain IT971_00625 PF13426 PAS domain IT971_00625 PF00672 HAMP domain IT971_00630 PF07992 Pyridine nucleotide-disulphide oxidoreductase IT971_00630 PF00403 Heavy-metal-associated domain IT971_00630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IT971_00635 PF09335 SNARE associated Golgi protein IT971_00640 PF01053 Cys/Met metabolism PLP-dependent enzyme IT971_00645 PF04379 ApaG domain IT971_00650 PF01227 GTP cyclohydrolase I IT971_00660 PF03881 Fructosamine kinase IT971_00665 PF01451 Low molecular weight phosphotyrosine protein phosphatase IT971_00680 PF01554 MatE IT971_00685 PF03009 Glycerophosphoryl diester phosphodiesterase family IT971_00740 PF00141 Peroxidase IT971_00745 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IT971_00745 PF00056 lactate/malate dehydrogenase, NAD binding domain IT971_00750 PF07859 alpha/beta hydrolase fold IT971_00760 PF02028 BCCT, betaine/carnitine/choline family transporter IT971_00770 PF02615 Malate/L-lactate dehydrogenase IT971_00775 PF00005 ABC transporter IT971_00785 PF00528 Binding-protein-dependent transport system inner membrane component IT971_00790 PF00132 Bacterial transferase hexapeptide (six repeats) IT971_00795 PF06299 Protein of unknown function (DUF1045) IT971_00800 PF00591 Glycosyl transferase family, a/b domain IT971_00800 PF02885 Glycosyl transferase family, helical bundle domain IT971_00800 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain IT971_00800 PF00625 Guanylate kinase IT971_00805 PF07969 Amidohydrolase family IT971_00810 PF00005 ABC transporter IT971_00815 PF00005 ABC transporter IT971_00820 PF06007 Phosphonate metabolism protein PhnJ IT971_00835 PF06754 Phosphonate metabolism protein PhnG IT971_00840 PF00392 Bacterial regulatory proteins, gntR family IT971_00840 PF00155 Aminotransferase class I and II IT971_00845 PF03458 UPF0126 domain IT971_00850 PF13426 PAS domain IT971_00850 PF00990 Diguanylate cyclase, GGDEF domain IT971_00850 PF00563 EAL domain IT971_00855 PF00557 Metallopeptidase family M24 IT971_00860 PF01274 Malate synthase IT971_00875 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_00895 PF00990 Diguanylate cyclase, GGDEF domain IT971_00920 PF00849 RNA pseudouridylate synthase IT971_00925 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IT971_00930 PF12973 ChrR Cupin-like domain IT971_00935 PF04542 Sigma-70 region 2 IT971_00935 PF04545 Sigma-70, region 4 IT971_00955 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IT971_00985 PF00849 RNA pseudouridylate synthase IT971_00995 PF02142 MGS-like domain IT971_01000 PF04851 Type III restriction enzyme, res subunit IT971_01005 PF07669 Eco57I restriction-modification methylase IT971_01015 PF05016 ParE toxin of type II toxin-antitoxin system, parDE IT971_01025 PF07992 Pyridine nucleotide-disulphide oxidoreductase IT971_01025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IT971_01030 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IT971_01030 PF02817 e3 binding domain IT971_01030 PF00364 Biotin-requiring enzyme IT971_01035 PF16870 2-oxoglutarate dehydrogenase C-terminal IT971_01035 PF02779 Transketolase, pyrimidine binding domain IT971_01035 PF16078 2-oxoglutarate dehydrogenase N-terminus IT971_01035 PF00676 Dehydrogenase E1 component IT971_01040 PF00549 CoA-ligase IT971_01040 PF02629 CoA binding domain IT971_01045 PF00549 CoA-ligase IT971_01045 PF08442 ATP-grasp domain IT971_01050 PF00056 lactate/malate dehydrogenase, NAD binding domain IT971_01050 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IT971_01055 PF03969 AFG1-like ATPase IT971_01070 PF02653 Branched-chain amino acid transport system / permease component IT971_01075 PF00005 ABC transporter IT971_01080 PF02653 Branched-chain amino acid transport system / permease component IT971_01085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IT971_01085 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IT971_01090 PF01261 Xylose isomerase-like TIM barrel IT971_01095 PF01544 CorA-like Mg2+ transporter protein IT971_01100 PF12794 Mechanosensitive ion channel inner membrane domain 1 IT971_01100 PF12795 Mechanosensitive ion channel porin domain IT971_01100 PF00924 Mechanosensitive ion channel IT971_01105 PF00293 NUDIX domain IT971_01110 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IT971_01110 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IT971_01115 PF02445 Quinolinate synthetase A protein IT971_01130 PF00120 Glutamine synthetase, catalytic domain IT971_01140 PF00043 Glutathione S-transferase, C-terminal domain IT971_01140 PF13417 Glutathione S-transferase, N-terminal domain IT971_01150 PF02899 Phage integrase, N-terminal SAM-like domain IT971_01150 PF00589 Phage integrase family IT971_01160 PF00923 Transaldolase/Fructose-6-phosphate aldolase IT971_01165 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IT971_01165 PF17764 3′ DNA-binding domain (3′BD) IT971_01165 PF00270 DEAD/DEAH box helicase IT971_01165 PF18074 Primosomal protein N C-terminal domain IT971_01185 PF00213 ATP synthase delta (OSCP) subunit IT971_01190 PF02874 ATP synthase alpha/beta family, beta-barrel domain IT971_01190 PF00306 ATP synthase alpha/beta chain, C terminal domain IT971_01190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IT971_01195 PF00231 ATP synthase IT971_01200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IT971_01200 PF02874 ATP synthase alpha/beta family, beta-barrel domain IT971_01205 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IT971_01210 PF00072 Response regulator receiver domain IT971_01220 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IT971_01220 PF01578 Cytochrome C assembly protein IT971_01225 PF01545 Cation efflux family IT971_01225 PF16916 Dimerisation domain of Zinc Transporter IT971_01230 PF13667 ThiC-associated domain IT971_01230 PF01964 Radical SAM ThiC family IT971_01235 PF02562 PhoH-like protein IT971_01245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IT971_01245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IT971_01255 PF01022 Bacterial regulatory protein, arsR family IT971_01270 PF16658 Class II release factor RF3, C-terminal domain IT971_01270 PF03144 Elongation factor Tu domain 2 IT971_01270 PF00009 Elongation factor Tu GTP binding domain IT971_01285 PF03466 LysR substrate binding domain IT971_01285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_01290 PF00491 Arginase family IT971_01305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IT971_01310 PF00873 AcrB/AcrD/AcrF family IT971_01315 PF02321 Outer membrane efflux protein IT971_01325 PF00356 Bacterial regulatory proteins, lacI family IT971_01330 PF13673 Acetyltransferase (GNAT) domain IT971_01330 PF00958 GMP synthase C terminal domain IT971_01330 PF00117 Glutamine amidotransferase class-I IT971_01330 PF03352 Methyladenine glycosylase IT971_01330 PF13302 Acetyltransferase (GNAT) domain IT971_01340 PF02325 YGGT family IT971_01345 PF02594 Uncharacterised ACR, YggU family COG1872 IT971_01350 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IT971_01350 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IT971_01355 PF02080 TrkA-C domain IT971_01355 PF03600 Citrate transporter IT971_01360 PF06224 Winged helix DNA-binding domain IT971_01370 PF00005 ABC transporter IT971_01370 PF08402 TOBE domain IT971_01375 PF00528 Binding-protein-dependent transport system inner membrane component IT971_01380 PF00528 Binding-protein-dependent transport system inner membrane component IT971_01395 PF02774 Semialdehyde dehydrogenase, dimerisation domain IT971_01395 PF01118 Semialdehyde dehydrogenase, NAD binding domain IT971_01415 PF08281 Sigma-70, region 4 IT971_01415 PF04542 Sigma-70 region 2 IT971_01415 PF12680 SnoaL-like domain IT971_01425 PF00180 Isocitrate/isopropylmalate dehydrogenase IT971_01430 PF00694 Aconitase C-terminal domain IT971_01440 PF00330 Aconitase family (aconitate hydratase) IT971_01445 PF01245 Ribosomal protein L19 IT971_01450 PF01746 tRNA (Guanine-1)-methyltransferase IT971_01455 PF01782 RimM N-terminal domain IT971_01455 PF05239 PRC-barrel domain IT971_01460 PF00886 Ribosomal protein S16 IT971_01465 PF02881 SRP54-type protein, helical bundle domain IT971_01465 PF00448 SRP54-type protein, GTPase domain IT971_01465 PF02978 Signal peptide binding domain IT971_01470 PF02569 Pantoate-beta-alanine ligase IT971_01475 PF02548 Ketopantoate hydroxymethyltransferase IT971_01480 PF00027 Cyclic nucleotide-binding domain IT971_01480 PF00325 Bacterial regulatory proteins, crp family IT971_01485 PF03597 Cytochrome oxidase maturation protein cbb3-type IT971_01490 PF00403 Heavy-metal-associated domain IT971_01500 PF13746 4Fe-4S dicluster domain IT971_01500 PF12801 4Fe-4S binding domain IT971_01500 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase IT971_01505 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP IT971_01505 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IT971_01520 PF00115 Cytochrome C and Quinol oxidase polypeptide I IT971_01530 PF01678 Diaminopimelate epimerase IT971_01535 PF00162 Phosphoglycerate kinase IT971_01555 PF00561 alpha/beta hydrolase fold IT971_01560 PF13649 Methyltransferase domain IT971_01570 PF00293 NUDIX domain IT971_01580 PF13180 PDZ domain IT971_01580 PF03572 Peptidase family S41 IT971_01585 PF01551 Peptidase family M23 IT971_01590 PF01676 Metalloenzyme superfamily IT971_01590 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IT971_01595 PF03313 Serine dehydratase alpha chain IT971_01595 PF03315 Serine dehydratase beta chain IT971_01600 PF01872 RibD C-terminal domain IT971_01610 PF02590 Predicted SPOUT methyltransferase IT971_01620 PF01467 Cytidylyltransferase-like IT971_01625 PF00171 Aldehyde dehydrogenase family IT971_01630 PF00664 ABC transporter transmembrane region IT971_01630 PF00005 ABC transporter IT971_01645 PF00990 Diguanylate cyclase, GGDEF domain IT971_01650 PF00990 Diguanylate cyclase, GGDEF domain IT971_01660 PF00890 FAD binding domain IT971_01660 PF02910 Fumarate reductase flavoprotein C-term IT971_01670 PF01728 FtsJ-like methyltransferase IT971_01670 PF18125 RlmM ferredoxin-like domain IT971_01680 PF01613 Flavin reductase like domain IT971_01685 PF07969 Amidohydrolase family IT971_01695 PF02653 Branched-chain amino acid transport system / permease component IT971_01700 PF00005 ABC transporter IT971_01705 PF02608 ABC transporter substrate-binding protein PnrA-like IT971_01710 PF01555 DNA methylase IT971_01710 PF18755 Restriction Enzyme Adenine Methylase Associated IT971_01720 PF14815 NUDIX domain IT971_01720 PF00730 HhH-GPD superfamily base excision DNA repair protein IT971_01730 PF06965 Na+/H+ antiporter 1 IT971_01730 PF13462 Thioredoxin IT971_01735 PF02463 RecF/RecN/SMC N terminal domain IT971_01745 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter IT971_01750 PF00119 ATP synthase A chain IT971_01755 PF00137 ATP synthase subunit C IT971_01760 PF00430 ATP synthase B/B' CF(0) IT971_01770 PF13409 Glutathione S-transferase, N-terminal domain IT971_01775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_01775 PF03466 LysR substrate binding domain IT971_01795 PF07726 ATPase family associated with various cellular activities (AAA) IT971_01795 PF17863 AAA lid domain IT971_01815 PF01743 Poly A polymerase head domain IT971_01815 PF12627 Probable RNA and SrmB- binding site of polymerase A IT971_01815 PF13735 tRNA nucleotidyltransferase domain 2 putative IT971_01830 PF00563 EAL domain IT971_01830 PF13426 PAS domain IT971_01830 PF00990 Diguanylate cyclase, GGDEF domain IT971_01835 PF02899 Phage integrase, N-terminal SAM-like domain IT971_01835 PF00589 Phage integrase family IT971_01845 PF01202 Shikimate kinase IT971_01850 PF01761 3-dehydroquinate synthase IT971_01855 PF00571 CBS domain IT971_01855 PF03471 Transporter associated domain IT971_01855 PF01595 Cyclin M transmembrane N-terminal domain IT971_01860 PF00571 CBS domain IT971_01875 PF00034 Cytochrome c IT971_01880 PF07995 Glucose / Sorbosone dehydrogenase IT971_01885 PF01722 BolA-like protein IT971_01890 PF00226 DnaJ domain IT971_01895 PF07728 AAA domain (dynein-related subfamily) IT971_01895 PF12556 Cobaltochelatase CobS subunit N terminal IT971_01895 PF08406 CbbQ/NirQ/NorQ C-terminal IT971_01900 PF11775 Cobalamin biosynthesis protein CobT VWA domain IT971_01900 PF06213 Cobalamin biosynthesis protein CobT IT971_01905 PF00749 tRNA synthetases class I (E and Q), catalytic domain IT971_01910 PF03466 LysR substrate binding domain IT971_01910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_01920 PF00563 EAL domain IT971_01920 PF03707 Bacterial signalling protein N terminal repeat IT971_01920 PF00990 Diguanylate cyclase, GGDEF domain IT971_01930 PF00830 Ribosomal L28 family IT971_01940 PF07715 TonB-dependent Receptor Plug Domain IT971_01940 PF00593 TonB dependent receptor IT971_01950 PF02600 Disulfide bond formation protein DsbB IT971_01955 PF09335 SNARE associated Golgi protein IT971_01970 PF00465 Iron-containing alcohol dehydrogenase IT971_01975 PF00171 Aldehyde dehydrogenase family IT971_01980 PF00465 Iron-containing alcohol dehydrogenase IT971_01985 PF00005 ABC transporter IT971_01990 PF00005 ABC transporter IT971_02000 PF02653 Branched-chain amino acid transport system / permease component IT971_02005 PF13458 Periplasmic binding protein IT971_02015 PF02954 Bacterial regulatory protein, Fis family IT971_02015 PF00072 Response regulator receiver domain IT971_02015 PF00158 Sigma-54 interaction domain IT971_02020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_02020 PF00512 His Kinase A (phospho-acceptor) domain IT971_02025 PF00107 Zinc-binding dehydrogenase IT971_02025 PF08240 Alcohol dehydrogenase GroES-like domain IT971_02030 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_02040 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_02045 PF00392 Bacterial regulatory proteins, gntR family IT971_02045 PF07729 FCD domain IT971_02050 PF03786 D-mannonate dehydratase (UxuA) IT971_02055 PF08125 Mannitol dehydrogenase C-terminal domain IT971_02055 PF01232 Mannitol dehydrogenase Rossmann domain IT971_02070 PF00593 TonB dependent receptor IT971_02070 PF07715 TonB-dependent Receptor Plug Domain IT971_02075 PF07690 Major Facilitator Superfamily IT971_02085 PF01979 Amidohydrolase family IT971_02085 PF13382 Adenine deaminase C-terminal domain IT971_02090 PF01156 Inosine-uridine preferring nucleoside hydrolase IT971_02095 PF08402 TOBE domain IT971_02095 PF00005 ABC transporter IT971_02110 PF13416 Bacterial extracellular solute-binding protein IT971_02115 PF00356 Bacterial regulatory proteins, lacI family IT971_02120 PF00672 HAMP domain IT971_02120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_02120 PF00512 His Kinase A (phospho-acceptor) domain IT971_02125 PF00486 Transcriptional regulatory protein, C terminal IT971_02125 PF00072 Response regulator receiver domain IT971_02130 PF14602 Hexapeptide repeat of succinyl-transferase IT971_02130 PF12804 MobA-like NTP transferase domain IT971_02130 PF00132 Bacterial transferase hexapeptide (six repeats) IT971_02140 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IT971_02145 PF00111 2Fe-2S iron-sulfur cluster binding domain IT971_02145 PF01799 [2Fe-2S] binding domain IT971_02150 PF01037 Lrp/AsnC ligand binding domain IT971_02155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IT971_02165 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_02175 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_02190 PF04209 homogentisate 1,2-dioxygenase IT971_02200 PF02798 Glutathione S-transferase, N-terminal domain IT971_02200 PF14497 Glutathione S-transferase, C-terminal domain IT971_02215 PF03435 Saccharopine dehydrogenase NADP binding domain IT971_02215 PF16653 Saccharopine dehydrogenase C-terminal domain IT971_02220 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IT971_02230 PF00440 Bacterial regulatory proteins, tetR family IT971_02240 PF00356 Bacterial regulatory proteins, lacI family IT971_02245 PF00005 ABC transporter IT971_02250 PF02653 Branched-chain amino acid transport system / permease component IT971_02255 PF13407 Periplasmic binding protein domain IT971_02265 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IT971_02265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IT971_02270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IT971_02270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IT971_02275 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_02285 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_02290 PF01425 Amidase IT971_02325 PF01037 Lrp/AsnC ligand binding domain IT971_02330 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IT971_02335 PF01321 Creatinase/Prolidase N-terminal domain IT971_02335 PF00557 Metallopeptidase family M24 IT971_02340 PF02423 Ornithine cyclodeaminase/mu-crystallin family IT971_02345 PF00291 Pyridoxal-phosphate dependent enzyme IT971_02350 PF17645 Arylmalonate decarboxylase IT971_02355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_02360 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IT971_02365 PF00392 Bacterial regulatory proteins, gntR family IT971_02365 PF00155 Aminotransferase class I and II IT971_02370 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_02375 PF00202 Aminotransferase class-III IT971_02380 PF00171 Aldehyde dehydrogenase family IT971_02390 PF00005 ABC transporter IT971_02390 PF00664 ABC transporter transmembrane region IT971_02390 PF03412 Peptidase C39 family IT971_02395 PF00753 Metallo-beta-lactamase superfamily IT971_02395 PF12706 Beta-lactamase superfamily domain IT971_02405 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IT971_02415 PF01638 HxlR-like helix-turn-helix IT971_02420 PF00107 Zinc-binding dehydrogenase IT971_02420 PF08240 Alcohol dehydrogenase GroES-like domain IT971_02425 PF03328 HpcH/HpaI aldolase/citrate lyase family IT971_02430 PF00072 Response regulator receiver domain IT971_02430 PF00990 Diguanylate cyclase, GGDEF domain IT971_02445 PF02469 Fasciclin domain IT971_02475 PF00990 Diguanylate cyclase, GGDEF domain IT971_02480 PF03099 Biotin/lipoate A/B protein ligase family IT971_02490 PF00390 Malic enzyme, N-terminal domain IT971_02490 PF03949 Malic enzyme, NAD binding domain IT971_02490 PF01515 Phosphate acetyl/butaryl transferase IT971_02495 PF01769 Divalent cation transporter IT971_02495 PF03448 MgtE intracellular N domain IT971_02495 PF00571 CBS domain IT971_02500 PF00990 Diguanylate cyclase, GGDEF domain IT971_02500 PF03707 Bacterial signalling protein N terminal repeat IT971_02500 PF00563 EAL domain IT971_02520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IT971_02520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IT971_02525 PF00689 Cation transporting ATPase, C-terminus IT971_02525 PF00690 Cation transporter/ATPase, N-terminus IT971_02530 PF01557 Fumarylacetoacetate (FAA) hydrolase family IT971_02560 PF01966 HD domain IT971_02570 PF00183 Hsp90 protein IT971_02585 PF09278 MerR, DNA binding IT971_02585 PF00376 MerR family regulatory protein IT971_02595 PF01479 S4 domain IT971_02600 PF00005 ABC transporter IT971_02600 PF03412 Peptidase C39 family IT971_02600 PF00664 ABC transporter transmembrane region IT971_02605 PF03412 Peptidase C39 family IT971_02605 PF00005 ABC transporter IT971_02605 PF00664 ABC transporter transmembrane region IT971_02610 PF13533 Biotin-lipoyl like IT971_02620 PF00468 Ribosomal protein L34 IT971_02625 PF00825 Ribonuclease P IT971_02630 PF01809 Putative membrane protein insertion efficiency factor IT971_02635 PF14849 YidC periplasmic domain IT971_02635 PF02096 60Kd inner membrane protein IT971_02640 PF01926 50S ribosome-binding GTPase IT971_02645 PF00696 Amino acid kinase family IT971_02650 PF08448 PAS fold IT971_02650 PF00990 Diguanylate cyclase, GGDEF domain IT971_02655 PF00919 Uncharacterized protein family UPF0004 IT971_02655 PF04055 Radical SAM superfamily IT971_02660 PF02881 SRP54-type protein, helical bundle domain IT971_02660 PF00448 SRP54-type protein, GTPase domain IT971_02665 PF00781 Diacylglycerol kinase catalytic domain IT971_02670 PF00210 Ferritin-like domain IT971_02690 PF04542 Sigma-70 region 2 IT971_02690 PF08281 Sigma-70, region 4 IT971_02700 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus IT971_02700 PF01048 Phosphorylase superfamily IT971_02730 PF00849 RNA pseudouridylate synthase IT971_02730 PF01479 S4 domain IT971_02735 PF07722 Peptidase C26 IT971_02740 PF14437 MafB19-like deaminase IT971_02745 PF04349 Periplasmic glucan biosynthesis protein, MdoG IT971_02750 PF00672 HAMP domain IT971_02750 PF00211 Adenylate and Guanylate cyclase catalytic domain IT971_02750 PF02743 Cache domain IT971_02760 PF00106 short chain dehydrogenase IT971_02765 PF06719 AraC-type transcriptional regulator N-terminus IT971_02765 PF12833 Helix-turn-helix domain IT971_02775 PF01032 FecCD transport family IT971_02780 PF00005 ABC transporter IT971_02785 PF02843 Phosphoribosylglycinamide synthetase, C domain IT971_02785 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IT971_02785 PF02844 Phosphoribosylglycinamide synthetase, N domain IT971_02790 PF02601 Exonuclease VII, large subunit IT971_02790 PF13742 OB-fold nucleic acid binding domain IT971_02820 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IT971_02825 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IT971_02835 PF00005 ABC transporter IT971_02835 PF00664 ABC transporter transmembrane region IT971_02845 PF13579 Glycosyl transferase 4-like domain IT971_02845 PF00534 Glycosyl transferases group 1 IT971_02855 PF00781 Diacylglycerol kinase catalytic domain IT971_02860 PF01523 Putative modulator of DNA gyrase IT971_02880 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IT971_02905 PF01040 UbiA prenyltransferase family IT971_02910 PF04452 RNA methyltransferase IT971_02915 PF04107 Glutamate-cysteine ligase family 2(GCS2) IT971_02925 PF01266 FAD dependent oxidoreductase IT971_02925 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IT971_02930 PF00528 Binding-protein-dependent transport system inner membrane component IT971_02935 PF00528 Binding-protein-dependent transport system inner membrane component IT971_02940 PF00005 ABC transporter IT971_02950 PF08220 DeoR-like helix-turn-helix domain IT971_02950 PF00455 DeoR C terminal sensor domain IT971_02955 PF10415 Fumarase C C-terminus IT971_02955 PF00206 Lyase IT971_02980 PF01810 LysE type translocator IT971_02985 PF00440 Bacterial regulatory proteins, tetR family IT971_02990 PF08240 Alcohol dehydrogenase GroES-like domain IT971_02990 PF00107 Zinc-binding dehydrogenase IT971_03000 PF00005 ABC transporter IT971_03000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IT971_03005 PF00005 ABC transporter IT971_03005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IT971_03010 PF00528 Binding-protein-dependent transport system inner membrane component IT971_03010 PF12911 N-terminal TM domain of oligopeptide transport permease C IT971_03015 PF00528 Binding-protein-dependent transport system inner membrane component IT971_03020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IT971_03025 PF01212 Beta-eliminating lyase IT971_03030 PF01212 Beta-eliminating lyase IT971_03035 PF00211 Adenylate and Guanylate cyclase catalytic domain IT971_03035 PF00072 Response regulator receiver domain IT971_03050 PF01523 Putative modulator of DNA gyrase IT971_03060 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IT971_03065 PF02628 Cytochrome oxidase assembly protein IT971_03075 PF01507 Phosphoadenosine phosphosulfate reductase family IT971_03080 PF01966 HD domain IT971_03090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IT971_03090 PF07992 Pyridine nucleotide-disulphide oxidoreductase IT971_03105 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain IT971_03105 PF07678 A-macroglobulin TED domain IT971_03105 PF07703 Alpha-2-macroglobulin bait region domain IT971_03105 PF01835 MG2 domain IT971_03105 PF17962 Bacterial macroglobulin domain 6 IT971_03105 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain IT971_03105 PF11974 Bacterial alpha-2-macroglobulin MG3 domain IT971_03105 PF00207 Alpha-2-macroglobulin family IT971_03105 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain IT971_03110 PF06832 Penicillin-Binding Protein C-terminus Family IT971_03110 PF00912 Transglycosylase IT971_03110 PF00905 Penicillin binding protein transpeptidase domain IT971_03115 PF01037 Lrp/AsnC ligand binding domain IT971_03120 PF00291 Pyridoxal-phosphate dependent enzyme IT971_03125 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_03140 PF01202 Shikimate kinase IT971_03145 PF00356 Bacterial regulatory proteins, lacI family IT971_03145 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IT971_03150 PF01205 Uncharacterized protein family UPF0029 IT971_03150 PF09186 Domain of unknown function (DUF1949) IT971_03170 PF01474 Class-II DAHP synthetase family IT971_03185 PF01906 Putative heavy-metal-binding IT971_03190 PF01906 Putative heavy-metal-binding IT971_03195 PF00795 Carbon-nitrogen hydrolase IT971_03195 PF02540 NAD synthase IT971_03200 PF00749 tRNA synthetases class I (E and Q), catalytic domain IT971_03205 PF01406 tRNA synthetases class I (C) catalytic domain IT971_03205 PF09190 DALR domain IT971_03210 PF02627 Carboxymuconolactone decarboxylase family IT971_03215 PF13411 MerR HTH family regulatory protein IT971_03220 PF00248 Aldo/keto reductase family IT971_03245 PF00682 HMGL-like IT971_03245 PF08502 LeuA allosteric (dimerisation) domain IT971_03255 PF00491 Arginase family IT971_03260 PF00005 ABC transporter IT971_03265 PF00528 Binding-protein-dependent transport system inner membrane component IT971_03280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_03280 PF08269 Cache domain IT971_03285 PF00163 Ribosomal protein S4/S9 N-terminal domain IT971_03285 PF01479 S4 domain IT971_03295 PF00924 Mechanosensitive ion channel IT971_03300 PF00462 Glutaredoxin IT971_03305 PF00892 EamA-like transporter family IT971_03325 PF01494 FAD binding domain IT971_03330 PF06463 Molybdenum Cofactor Synthesis C IT971_03330 PF04055 Radical SAM superfamily IT971_03345 PF10090 Histidine phosphotransferase C-terminal domain IT971_03350 PF01584 CheW-like domain IT971_03350 PF02895 Signal transducing histidine kinase, homodimeric domain IT971_03350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_03350 PF01627 Hpt domain IT971_03350 PF00072 Response regulator receiver domain IT971_03360 PF00072 Response regulator receiver domain IT971_03360 PF01966 HD domain IT971_03365 PF01339 CheB methylesterase IT971_03365 PF00072 Response regulator receiver domain IT971_03370 PF01739 CheR methyltransferase, SAM binding domain IT971_03370 PF03705 CheR methyltransferase, all-alpha domain IT971_03375 PF00486 Transcriptional regulatory protein, C terminal IT971_03375 PF00072 Response regulator receiver domain IT971_03380 PF18269 T3SS EscN ATPase C-terminal domain IT971_03380 PF02874 ATP synthase alpha/beta family, beta-barrel domain IT971_03380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IT971_03390 PF03129 Anticodon binding domain IT971_03390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IT971_03390 PF04073 Aminoacyl-tRNA editing domain IT971_03395 PF03741 Integral membrane protein TerC family IT971_03400 PF13416 Bacterial extracellular solute-binding protein IT971_03405 PF00528 Binding-protein-dependent transport system inner membrane component IT971_03410 PF00005 ABC transporter IT971_03415 PF13640 2OG-Fe(II) oxygenase superfamily IT971_03415 PF18331 PKHD-type hydroxylase C-terminal domain IT971_03430 PF10609 NUBPL iron-transfer P-loop NTPase IT971_03440 PF00771 FHIPEP family IT971_03445 PF02954 Bacterial regulatory protein, Fis family IT971_03445 PF00158 Sigma-54 interaction domain IT971_03450 PF01618 MotA/TolQ/ExbB proton channel family IT971_03455 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IT971_03465 PF01514 Secretory protein of YscJ/FliF family IT971_03465 PF08345 Flagellar M-ring protein C-terminal IT971_03470 PF07559 Flagellar basal body protein FlaE IT971_03470 PF00460 Flagella basal body rod protein IT971_03470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IT971_03485 PF02561 Flagellar protein FliS IT971_03500 PF00669 Bacterial flagellin N-terminal helical region IT971_03500 PF00700 Bacterial flagellin C-terminal helical region IT971_03505 PF00700 Bacterial flagellin C-terminal helical region IT971_03505 PF00669 Bacterial flagellin N-terminal helical region IT971_03510 PF02623 FliW protein IT971_03520 PF00460 Flagella basal body rod protein IT971_03520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IT971_03530 PF10135 Rod binding protein IT971_03535 PF02119 Flagellar P-ring protein IT971_03540 PF10768 Class II flagellar assembly regulator IT971_03545 PF01258 Prokaryotic dksA/traR C4-type zinc finger IT971_03550 PF02107 Flagellar L-ring protein IT971_03560 PF00460 Flagella basal body rod protein IT971_03560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IT971_03565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IT971_03565 PF00460 Flagella basal body rod protein IT971_03570 PF03748 Flagellar basal body-associated protein FliL IT971_03575 PF02154 Flagellar motor switch protein FliM IT971_03575 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IT971_03590 PF00072 Response regulator receiver domain IT971_03605 PF00691 OmpA family IT971_03605 PF13677 Membrane MotB of proton-channel complex MotA/MotB IT971_03620 PF00813 FliP family IT971_03635 PF01312 FlhB HrpN YscU SpaS Family IT971_03645 PF00460 Flagella basal body rod protein IT971_03650 PF00460 Flagella basal body rod protein IT971_03650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IT971_03655 PF02049 Flagellar hook-basal body complex protein FliE IT971_03660 PF01313 Bacterial export proteins, family 3 IT971_03665 PF01311 Bacterial export proteins, family 1 IT971_03670 PF01312 FlhB HrpN YscU SpaS Family IT971_03680 PF08448 PAS fold IT971_03680 PF00512 His Kinase A (phospho-acceptor) domain IT971_03680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_03680 PF00072 Response regulator receiver domain IT971_03680 PF13188 PAS domain IT971_03690 PF01699 Sodium/calcium exchanger protein IT971_03715 PF01402 Ribbon-helix-helix protein, copG family IT971_03715 PF08753 NikR C terminal nickel binding domain IT971_03720 PF00154 recA bacterial DNA recombination protein IT971_03740 PF07043 Protein of unknown function (DUF1328) IT971_03760 PF02272 DHHA1 domain IT971_03760 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IT971_03760 PF01411 tRNA synthetases class II (A) IT971_03765 PF10011 Predicted membrane protein (DUF2254) IT971_03775 PF07690 Major Facilitator Superfamily IT971_03790 PF10431 C-terminal, D2-small domain, of ClpB protein IT971_03790 PF00004 ATPase family associated with various cellular activities (AAA) IT971_03790 PF07724 AAA domain (Cdc48 subfamily) IT971_03790 PF17871 AAA lid domain IT971_03790 PF02861 Clp amino terminal domain, pathogenicity island component IT971_03800 PF04134 Protein of unknown function, DUF393 IT971_03810 PF01546 Peptidase family M20/M25/M40 IT971_03815 PF03009 Glycerophosphoryl diester phosphodiesterase family IT971_03820 PF03358 NADPH-dependent FMN reductase IT971_03825 PF02678 Pirin IT971_03825 PF05726 Pirin C-terminal cupin domain IT971_03830 PF00180 Isocitrate/isopropylmalate dehydrogenase IT971_03845 PF13533 Biotin-lipoyl like IT971_03850 PF07690 Major Facilitator Superfamily IT971_03865 PF00528 Binding-protein-dependent transport system inner membrane component IT971_03870 PF00528 Binding-protein-dependent transport system inner membrane component IT971_03875 PF13416 Bacterial extracellular solute-binding protein IT971_03880 PF00005 ABC transporter IT971_03885 PF08220 DeoR-like helix-turn-helix domain IT971_03885 PF00455 DeoR C terminal sensor domain IT971_03890 PF07992 Pyridine nucleotide-disulphide oxidoreductase IT971_03900 PF03466 LysR substrate binding domain IT971_03900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_03905 PF00034 Cytochrome c IT971_03905 PF03150 Di-haem cytochrome c peroxidase IT971_03910 PF03641 Possible lysine decarboxylase IT971_03925 PF02666 Phosphatidylserine decarboxylase IT971_03930 PF01066 CDP-alcohol phosphatidyltransferase IT971_03945 PF00873 AcrB/AcrD/AcrF family IT971_03960 PF12852 Cupin IT971_03960 PF12833 Helix-turn-helix domain IT971_03985 PF04055 Radical SAM superfamily IT971_03990 PF01242 6-pyruvoyl tetrahydropterin synthase IT971_03995 PF06508 Queuosine biosynthesis protein QueC IT971_04000 PF01209 ubiE/COQ5 methyltransferase family IT971_04020 PF00080 Copper/zinc superoxide dismutase (SODC) IT971_04035 PF09334 tRNA synthetases class I (M) IT971_04035 PF08264 Anticodon-binding domain of tRNA IT971_04035 PF13603 Leucyl-tRNA synthetase, Domain 2 IT971_04050 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IT971_04050 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IT971_04050 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IT971_04060 PF00534 Glycosyl transferases group 1 IT971_04060 PF13439 Glycosyltransferase Family 4 IT971_04085 PF00534 Glycosyl transferases group 1 IT971_04095 PF03808 Glycosyl transferase WecB/TagA/CpsF family IT971_04100 PF02706 Chain length determinant protein IT971_04100 PF13807 G-rich domain on putative tyrosine kinase IT971_04100 PF13614 AAA domain IT971_04130 PF08482 ATP-dependent helicase C-terminal IT971_04130 PF00270 DEAD/DEAH box helicase IT971_04130 PF04408 Helicase associated domain (HA2) IT971_04130 PF00271 Helicase conserved C-terminal domain IT971_04140 PF03449 Transcription elongation factor, N-terminal IT971_04140 PF01272 Transcription elongation factor, GreA/GreB, C-term IT971_04145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_04145 PF03466 LysR substrate binding domain IT971_04155 PF16197 Ketoacyl-synthetase C-terminal extension IT971_04155 PF09277 Erythronolide synthase, docking IT971_04155 PF08990 Erythronolide synthase docking IT971_04155 PF00109 Beta-ketoacyl synthase, N-terminal domain IT971_04155 PF14765 Polyketide synthase dehydratase IT971_04155 PF08240 Alcohol dehydrogenase GroES-like domain IT971_04155 PF00698 Acyl transferase domain IT971_04155 PF00550 Phosphopantetheine attachment site IT971_04155 PF08659 KR domain IT971_04155 PF02801 Beta-ketoacyl synthase, C-terminal domain IT971_04165 PF03466 LysR substrate binding domain IT971_04165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_04185 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IT971_04185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IT971_04215 PF04945 YHS domain IT971_04220 PF03729 Short repeat of unknown function (DUF308) IT971_04225 PF03033 Glycosyltransferase family 28 N-terminal domain IT971_04225 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase IT971_04230 PF13307 Helicase C-terminal domain IT971_04230 PF04851 Type III restriction enzyme, res subunit IT971_04240 PF01810 LysE type translocator IT971_04250 PF09335 SNARE associated Golgi protein IT971_04260 PF02566 OsmC-like protein IT971_04265 PF07859 alpha/beta hydrolase fold IT971_04270 PF01047 MarR family IT971_04285 PF00672 HAMP domain IT971_04285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_04290 PF08269 Cache domain IT971_04290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_04295 PF00990 Diguanylate cyclase, GGDEF domain IT971_04295 PF03707 Bacterial signalling protein N terminal repeat IT971_04295 PF00563 EAL domain IT971_04300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_04300 PF00512 His Kinase A (phospho-acceptor) domain IT971_04300 PF00989 PAS fold IT971_04305 PF01921 tRNA synthetases class I (K) IT971_04310 PF01619 Proline dehydrogenase IT971_04320 PF01063 Amino-transferase class IV IT971_04325 PF00356 Bacterial regulatory proteins, lacI family IT971_04335 PF00528 Binding-protein-dependent transport system inner membrane component IT971_04340 PF00005 ABC transporter IT971_04340 PF08402 TOBE domain IT971_04345 PF00459 Inositol monophosphatase family IT971_04350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_04350 PF00512 His Kinase A (phospho-acceptor) domain IT971_04350 PF01627 Hpt domain IT971_04350 PF00072 Response regulator receiver domain IT971_04350 PF17149 Periplasmic sensor domain found in signal transduction proteins IT971_04350 PF00672 HAMP domain IT971_04360 PF07411 Domain of unknown function (DUF1508) IT971_04435 PF07484 Phage Tail Collar Domain IT971_04440 PF07484 Phage Tail Collar Domain IT971_04500 PF00440 Bacterial regulatory proteins, tetR family IT971_04540 PF00293 NUDIX domain IT971_04540 PF13344 Haloacid dehalogenase-like hydrolase IT971_04580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IT971_04580 PF07992 Pyridine nucleotide-disulphide oxidoreductase IT971_04600 PF12680 SnoaL-like domain IT971_04600 PF04542 Sigma-70 region 2 IT971_04600 PF08281 Sigma-70, region 4 IT971_04610 PF00593 TonB dependent receptor IT971_04610 PF07715 TonB-dependent Receptor Plug Domain IT971_04615 PF07690 Major Facilitator Superfamily IT971_04625 PF01180 Dihydroorotate dehydrogenase IT971_04645 PF00892 EamA-like transporter family IT971_04660 PF13005 zinc-finger binding domain of transposase IS66 IT971_04660 PF13817 IS66 C-terminal element IT971_04660 PF13007 Transposase C of IS166 homeodomain IT971_04660 PF03050 Transposase IS66 family IT971_04665 PF01638 HxlR-like helix-turn-helix IT971_04675 PF01063 Amino-transferase class IV IT971_04680 PF00797 N-acetyltransferase IT971_04705 PF04542 Sigma-70 region 2 IT971_04705 PF08281 Sigma-70, region 4 IT971_04705 PF12680 SnoaL-like domain IT971_04715 PF07715 TonB-dependent Receptor Plug Domain IT971_04715 PF00593 TonB dependent receptor IT971_04720 PF01738 Dienelactone hydrolase family IT971_04725 PF05724 Thiopurine S-methyltransferase (TPMT) IT971_04730 PF02653 Branched-chain amino acid transport system / permease component IT971_04735 PF00005 ABC transporter IT971_04755 PF16859 Tetracyclin repressor-like, C-terminal domain IT971_04755 PF00440 Bacterial regulatory proteins, tetR family IT971_04760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IT971_04760 PF00529 HlyD membrane-fusion protein of T1SS IT971_04765 PF00873 AcrB/AcrD/AcrF family IT971_04770 PF07687 Peptidase dimerisation domain IT971_04770 PF01546 Peptidase family M20/M25/M40 IT971_04775 PF01513 ATP-NAD kinase IT971_04780 PF16925 Tetracyclin repressor-like, C-terminal domain IT971_04780 PF00440 Bacterial regulatory proteins, tetR family IT971_04790 PF04143 Sulphur transport IT971_04795 PF00145 C-5 cytosine-specific DNA methylase IT971_04795 PF18284 DNA methylase N-terminal domain IT971_04800 PF03852 DNA mismatch endonuclease Vsr IT971_04810 PF00271 Helicase conserved C-terminal domain IT971_04810 PF00270 DEAD/DEAH box helicase IT971_04815 PF00313 'Cold-shock' DNA-binding domain IT971_04820 PF07729 FCD domain IT971_04820 PF00392 Bacterial regulatory proteins, gntR family IT971_04830 PF00528 Binding-protein-dependent transport system inner membrane component IT971_04835 PF00528 Binding-protein-dependent transport system inner membrane component IT971_04840 PF00005 ABC transporter IT971_04850 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IT971_04855 PF00171 Aldehyde dehydrogenase family IT971_04870 PF00107 Zinc-binding dehydrogenase IT971_04870 PF16884 N-terminal domain of oxidoreductase IT971_04875 PF03073 TspO/MBR family IT971_04880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_04880 PF08269 Cache domain IT971_04885 PF07683 Cobalamin synthesis protein cobW C-terminal domain IT971_04885 PF02492 CobW/HypB/UreG, nucleotide-binding domain IT971_04890 PF00043 Glutathione S-transferase, C-terminal domain IT971_04890 PF02798 Glutathione S-transferase, N-terminal domain IT971_04895 PF02798 Glutathione S-transferase, N-terminal domain IT971_04900 PF07690 Major Facilitator Superfamily IT971_04900 PF00083 Sugar (and other) transporter IT971_04905 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IT971_04905 PF06481 COX Aromatic Rich Motif IT971_04910 PF00115 Cytochrome C and Quinol oxidase polypeptide I IT971_04915 PF00510 Cytochrome c oxidase subunit III IT971_04920 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IT971_04925 PF02104 SURF1 family IT971_04935 PF08241 Methyltransferase domain IT971_04940 PF17922 Tetracyclin repressor-like, C-terminal domain IT971_04940 PF00440 Bacterial regulatory proteins, tetR family IT971_04945 PF01741 Large-conductance mechanosensitive channel, MscL IT971_04950 PF00186 Dihydrofolate reductase IT971_04955 PF00303 Thymidylate synthase IT971_04975 PF05683 Fumarase C-terminus IT971_04975 PF05681 Fumarate hydratase (Fumerase) IT971_04985 PF05145 Transition state regulatory protein AbrB IT971_04990 PF00857 Isochorismatase family IT971_05005 PF08279 HTH domain IT971_05005 PF13280 WYL domain IT971_05010 PF03707 Bacterial signalling protein N terminal repeat IT971_05010 PF00990 Diguanylate cyclase, GGDEF domain IT971_05010 PF00563 EAL domain IT971_05010 PF13188 PAS domain IT971_05020 PF00990 Diguanylate cyclase, GGDEF domain IT971_05020 PF00072 Response regulator receiver domain IT971_05025 PF01740 STAS domain IT971_05030 PF00158 Sigma-54 interaction domain IT971_05030 PF02954 Bacterial regulatory protein, Fis family IT971_05030 PF00072 Response regulator receiver domain IT971_05035 PF00155 Aminotransferase class I and II IT971_05045 PF00072 Response regulator receiver domain IT971_05045 PF09308 LuxQ, periplasmic IT971_05045 PF00512 His Kinase A (phospho-acceptor) domain IT971_05045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_05060 PF03009 Glycerophosphoryl diester phosphodiesterase family IT971_05065 PF13407 Periplasmic binding protein domain IT971_05070 PF00990 Diguanylate cyclase, GGDEF domain IT971_05070 PF00072 Response regulator receiver domain IT971_05075 PF01098 Cell cycle protein IT971_05080 PF03717 Penicillin-binding Protein dimerisation domain IT971_05080 PF00905 Penicillin binding protein transpeptidase domain IT971_05090 PF04085 rod shape-determining protein MreC IT971_05105 PF08502 LeuA allosteric (dimerisation) domain IT971_05105 PF00682 HMGL-like IT971_05110 PF01810 LysE type translocator IT971_05125 PF00990 Diguanylate cyclase, GGDEF domain IT971_05130 PF00313 'Cold-shock' DNA-binding domain IT971_05135 PF01812 5-formyltetrahydrofolate cyclo-ligase family IT971_05140 PF05721 Phytanoyl-CoA dioxygenase (PhyH) IT971_05155 PF02541 Ppx/GppA phosphatase family IT971_05160 PF01728 FtsJ-like methyltransferase IT971_05165 PF08447 PAS fold IT971_05165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_05170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_05175 PF00478 IMP dehydrogenase / GMP reductase domain IT971_05175 PF00571 CBS domain IT971_05180 PF01029 NusB family IT971_05180 PF01189 16S rRNA methyltransferase RsmB/F IT971_05190 PF00958 GMP synthase C terminal domain IT971_05190 PF02540 NAD synthase IT971_05190 PF00117 Glutamine amidotransferase class-I IT971_05205 PF00270 DEAD/DEAH box helicase IT971_05205 PF00271 Helicase conserved C-terminal domain IT971_05205 PF08148 DSHCT (NUC185) domain IT971_05235 PF03432 Relaxase/Mobilisation nuclease domain IT971_05235 PF18821 Large polyvalent protein-associated domain 7 IT971_05240 PF03869 Arc-like DNA binding domain IT971_05245 PF01850 PIN domain IT971_05285 PF02463 RecF/RecN/SMC N terminal domain IT971_05290 PF01420 Type I restriction modification DNA specificity domain IT971_05295 PF12161 HsdM N-terminal domain IT971_05295 PF02384 N-6 DNA Methylase IT971_05300 PF04851 Type III restriction enzyme, res subunit IT971_05300 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) IT971_05300 PF00271 Helicase conserved C-terminal domain IT971_05300 PF08463 EcoEI R protein C-terminal IT971_05315 PF08274 PhnA Zinc-Ribbon IT971_05315 PF03831 PhnA domain IT971_05330 PF13443 Cro/C1-type HTH DNA-binding domain IT971_05350 PF01022 Bacterial regulatory protein, arsR family IT971_05375 PF00403 Heavy-metal-associated domain IT971_05380 PF00497 Bacterial extracellular solute-binding proteins, family 3 IT971_05385 PF00528 Binding-protein-dependent transport system inner membrane component IT971_05390 PF00528 Binding-protein-dependent transport system inner membrane component IT971_05395 PF00005 ABC transporter IT971_05435 PF01322 Cytochrome C' IT971_05440 PF00171 Aldehyde dehydrogenase family IT971_05450 PF12697 Alpha/beta hydrolase family IT971_05455 PF00293 NUDIX domain IT971_05480 PF01547 Bacterial extracellular solute-binding protein IT971_05485 PF00528 Binding-protein-dependent transport system inner membrane component IT971_05490 PF00528 Binding-protein-dependent transport system inner membrane component IT971_05495 PF00128 Alpha amylase, catalytic domain IT971_05500 PF00005 ABC transporter IT971_05500 PF08402 TOBE domain IT971_05505 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IT971_05505 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IT971_05510 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IT971_05515 PF00920 Dehydratase family IT971_05520 PF02685 Glucokinase IT971_05525 PF01081 KDPG and KHG aldolase IT971_05540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_05540 PF03466 LysR substrate binding domain IT971_05550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_05555 PF04542 Sigma-70 region 2 IT971_05555 PF04545 Sigma-70, region 4 IT971_05580 PF01297 Zinc-uptake complex component A periplasmic IT971_05600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IT971_05605 PF00528 Binding-protein-dependent transport system inner membrane component IT971_05610 PF00528 Binding-protein-dependent transport system inner membrane component IT971_05615 PF04293 SpoVR like protein IT971_05620 PF04285 Protein of unknown function (DUF444) IT971_05625 PF06798 PrkA serine protein kinase C-terminal domain IT971_05625 PF08298 PrkA AAA domain IT971_05630 PF00581 Rhodanese-like domain IT971_05645 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_05655 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_05665 PF01042 Endoribonuclease L-PSP IT971_05670 PF00440 Bacterial regulatory proteins, tetR family IT971_05690 PF00588 SpoU rRNA Methylase family IT971_05690 PF08032 RNA 2'-O ribose methyltransferase substrate binding IT971_05705 PF03144 Elongation factor Tu domain 2 IT971_05705 PF00009 Elongation factor Tu GTP binding domain IT971_05705 PF03143 Elongation factor Tu C-terminal domain IT971_05715 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IT971_05720 PF02357 Transcription termination factor nusG IT971_05720 PF00467 KOW motif IT971_05725 PF03946 Ribosomal protein L11, N-terminal domain IT971_05725 PF00298 Ribosomal protein L11, RNA binding domain IT971_05730 PF00687 Ribosomal protein L1p/L10e family IT971_05735 PF00466 Ribosomal protein L10 IT971_05740 PF00542 Ribosomal protein L7/L12 C-terminal domain IT971_05740 PF16320 Ribosomal protein L7/L12 dimerisation domain IT971_05745 PF10385 RNA polymerase beta subunit external 1 domain IT971_05745 PF00562 RNA polymerase Rpb2, domain 6 IT971_05745 PF04560 RNA polymerase Rpb2, domain 7 IT971_05745 PF04565 RNA polymerase Rpb2, domain 3 IT971_05745 PF04563 RNA polymerase beta subunit IT971_05745 PF04561 RNA polymerase Rpb2, domain 2 IT971_05750 PF05000 RNA polymerase Rpb1, domain 4 IT971_05750 PF04983 RNA polymerase Rpb1, domain 3 IT971_05750 PF00623 RNA polymerase Rpb1, domain 2 IT971_05750 PF04997 RNA polymerase Rpb1, domain 1 IT971_05750 PF04998 RNA polymerase Rpb1, domain 5 IT971_05755 PF00164 Ribosomal protein S12/S23 IT971_05760 PF00177 Ribosomal protein S7p/S5e IT971_05765 PF03764 Elongation factor G, domain IV IT971_05765 PF00009 Elongation factor Tu GTP binding domain IT971_05765 PF00679 Elongation factor G C-terminus IT971_05765 PF14492 Elongation Factor G, domain II IT971_05765 PF03144 Elongation factor Tu domain 2 IT971_05770 PF00009 Elongation factor Tu GTP binding domain IT971_05770 PF03144 Elongation factor Tu domain 2 IT971_05770 PF03143 Elongation factor Tu C-terminal domain IT971_05775 PF00338 Ribosomal protein S10p/S20e IT971_05780 PF00297 Ribosomal protein L3 IT971_05785 PF00573 Ribosomal protein L4/L1 family IT971_05790 PF00276 Ribosomal protein L23 IT971_05795 PF03947 Ribosomal Proteins L2, C-terminal domain IT971_05795 PF00181 Ribosomal Proteins L2, RNA binding domain IT971_05800 PF00203 Ribosomal protein S19 IT971_05805 PF00237 Ribosomal protein L22p/L17e IT971_05810 PF00189 Ribosomal protein S3, C-terminal domain IT971_05810 PF07650 KH domain IT971_05815 PF00252 Ribosomal protein L16p/L10e IT971_05820 PF00831 Ribosomal L29 protein IT971_05825 PF00366 Ribosomal protein S17 IT971_05830 PF00238 Ribosomal protein L14p/L23e IT971_05835 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IT971_05835 PF00467 KOW motif IT971_05840 PF00673 ribosomal L5P family C-terminus IT971_05840 PF00281 Ribosomal protein L5 IT971_05845 PF00253 Ribosomal protein S14p/S29e IT971_05850 PF00410 Ribosomal protein S8 IT971_05855 PF00347 Ribosomal protein L6 IT971_05860 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IT971_05865 PF03719 Ribosomal protein S5, C-terminal domain IT971_05865 PF00333 Ribosomal protein S5, N-terminal domain IT971_05870 PF00327 Ribosomal protein L30p/L7e IT971_05875 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IT971_05880 PF00344 SecY translocase IT971_05885 PF05191 Adenylate kinase, active site lid IT971_05890 PF00416 Ribosomal protein S13/S18 IT971_05895 PF00411 Ribosomal protein S11 IT971_05900 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IT971_05900 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IT971_05900 PF01000 RNA polymerase Rpb3/RpoA insert domain IT971_05905 PF01196 Ribosomal protein L17 IT971_05910 PF17820 PDZ domain IT971_05910 PF13180 PDZ domain IT971_05925 PF12002 MgsA AAA+ ATPase C terminal IT971_05925 PF16193 AAA C-terminal domain IT971_05925 PF00004 ATPase family associated with various cellular activities (AAA) IT971_05930 PF02525 Flavodoxin-like fold IT971_05940 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IT971_05945 PF01479 S4 domain IT971_05945 PF00849 RNA pseudouridylate synthase IT971_05955 PF13419 Haloacid dehalogenase-like hydrolase IT971_05970 PF01738 Dienelactone hydrolase family IT971_05975 PF00528 Binding-protein-dependent transport system inner membrane component IT971_05980 PF00005 ABC transporter IT971_06000 PF01039 Carboxyl transferase domain IT971_06010 PF00364 Biotin-requiring enzyme IT971_06010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IT971_06010 PF18140 Propionyl-coenzyme A carboxylase BT domain IT971_06010 PF02785 Biotin carboxylase C-terminal domain IT971_06010 PF00289 Biotin carboxylase, N-terminal domain IT971_06020 PF00550 Phosphopantetheine attachment site IT971_06020 PF00698 Acyl transferase domain IT971_06020 PF08240 Alcohol dehydrogenase GroES-like domain IT971_06020 PF08659 KR domain IT971_06020 PF02801 Beta-ketoacyl synthase, C-terminal domain IT971_06020 PF14765 Polyketide synthase dehydratase IT971_06020 PF08990 Erythronolide synthase docking IT971_06020 PF09277 Erythronolide synthase, docking IT971_06020 PF16197 Ketoacyl-synthetase C-terminal extension IT971_06020 PF00109 Beta-ketoacyl synthase, N-terminal domain IT971_06035 PF00708 Acylphosphatase IT971_06050 PF01565 FAD binding domain IT971_06050 PF02913 FAD linked oxidases, C-terminal domain IT971_06055 PF01300 Telomere recombination IT971_06055 PF03481 Putative GTP-binding controlling metal-binding IT971_06065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_06065 PF08269 Cache domain IT971_06070 PF00459 Inositol monophosphatase family IT971_06095 PF01875 Memo-like protein IT971_06105 PF00583 Acetyltransferase (GNAT) family IT971_06105 PF13673 Acetyltransferase (GNAT) domain IT971_06115 PF02789 Cytosol aminopeptidase family, N-terminal domain IT971_06115 PF00883 Cytosol aminopeptidase family, catalytic domain IT971_06155 PF09383 NIL domain IT971_06155 PF00005 ABC transporter IT971_06160 PF00528 Binding-protein-dependent transport system inner membrane component IT971_06165 PF03180 NLPA lipoprotein IT971_06185 PF07690 Major Facilitator Superfamily IT971_06200 PF01810 LysE type translocator IT971_06215 PF01758 Sodium Bile acid symporter family IT971_06220 PF03960 ArsC family IT971_06225 PF03358 NADPH-dependent FMN reductase IT971_06235 PF12852 Cupin IT971_06235 PF12833 Helix-turn-helix domain IT971_06245 PF00005 ABC transporter IT971_06245 PF12848 ABC transporter IT971_06250 PF00334 Nucleoside diphosphate kinase IT971_06270 PF00551 Formyl transferase IT971_06275 PF00586 AIR synthase related protein, N-terminal domain IT971_06275 PF02769 AIR synthase related protein, C-terminal domain IT971_06285 PF01594 AI-2E family transporter IT971_06290 PF08299 Bacterial dnaA protein helix-turn-helix IT971_06290 PF00308 Bacterial dnaA protein IT971_06290 PF11638 DnaA N-terminal domain IT971_06295 PF08443 RimK-like ATP-grasp domain IT971_06295 PF18030 RimK PreATP-grasp domain IT971_06300 PF18030 RimK PreATP-grasp domain IT971_06300 PF08443 RimK-like ATP-grasp domain IT971_06310 PF01612 3'-5' exonuclease IT971_06310 PF00570 HRDC domain IT971_06320 PF05368 NmrA-like family IT971_06325 PF03466 LysR substrate binding domain IT971_06325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_06340 PF02541 Ppx/GppA phosphatase family IT971_06345 PF17941 Polyphosphate kinase C-terminal domain 1 IT971_06345 PF02503 Polyphosphate kinase middle domain IT971_06345 PF13089 Polyphosphate kinase N-terminal domain IT971_06345 PF13090 Polyphosphate kinase C-terminal domain 2 IT971_06355 PF00152 tRNA synthetases class II (D, K and N) IT971_06355 PF01336 OB-fold nucleic acid binding domain IT971_06355 PF02938 GAD domain IT971_06370 PF01022 Bacterial regulatory protein, arsR family IT971_06375 PF00850 Histone deacetylase domain IT971_06380 PF02609 Exonuclease VII small subunit IT971_06385 PF00348 Polyprenyl synthetase IT971_06395 PF02779 Transketolase, pyrimidine binding domain IT971_06395 PF02780 Transketolase, C-terminal domain IT971_06395 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IT971_06400 PF07715 TonB-dependent Receptor Plug Domain IT971_06400 PF00593 TonB dependent receptor IT971_06415 PF00501 AMP-binding enzyme IT971_06415 PF13193 AMP-binding enzyme C-terminal domain IT971_06425 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_06435 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_06440 PF07729 FCD domain IT971_06440 PF00392 Bacterial regulatory proteins, gntR family IT971_06445 PF01728 FtsJ-like methyltransferase IT971_06445 PF01479 S4 domain IT971_06450 PF03928 Haem-degrading IT971_06455 PF03466 LysR substrate binding domain IT971_06455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_06480 PF01264 Chorismate synthase IT971_06490 PF03631 Virulence factor BrkB IT971_06500 PF00106 short chain dehydrogenase IT971_06505 PF13193 AMP-binding enzyme C-terminal domain IT971_06505 PF00501 AMP-binding enzyme IT971_06515 PF12794 Mechanosensitive ion channel inner membrane domain 1 IT971_06515 PF12795 Mechanosensitive ion channel porin domain IT971_06515 PF00924 Mechanosensitive ion channel IT971_06520 PF01047 MarR family IT971_06535 PF01556 DnaJ C terminal domain IT971_06535 PF00226 DnaJ domain IT971_06540 PF16998 17 kDa outer membrane surface antigen IT971_06540 PF05433 Glycine zipper 2TM domain IT971_06545 PF01243 Pyridoxamine 5'-phosphate oxidase IT971_06545 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IT971_06550 PF01022 Bacterial regulatory protein, arsR family IT971_06565 PF02586 SOS response associated peptidase (SRAP) IT971_06575 PF13508 Acetyltransferase (GNAT) domain IT971_06585 PF01272 Transcription elongation factor, GreA/GreB, C-term IT971_06585 PF14760 Rnk N-terminus IT971_06590 PF00155 Aminotransferase class I and II IT971_06595 PF00202 Aminotransferase class-III IT971_06630 PF02525 Flavodoxin-like fold IT971_06635 PF00156 Phosphoribosyl transferase domain IT971_06645 PF00916 Sulfate permease family IT971_06645 PF01740 STAS domain IT971_06650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IT971_06650 PF00378 Enoyl-CoA hydratase/isomerase IT971_06650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IT971_06660 PF07690 Major Facilitator Superfamily IT971_06665 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_06670 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IT971_06675 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_06680 PF02954 Bacterial regulatory protein, Fis family IT971_06680 PF00072 Response regulator receiver domain IT971_06680 PF00158 Sigma-54 interaction domain IT971_06685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_06685 PF00512 His Kinase A (phospho-acceptor) domain IT971_06695 PF03466 LysR substrate binding domain IT971_06695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_06700 PF07690 Major Facilitator Superfamily IT971_06710 PF00248 Aldo/keto reductase family IT971_06715 PF04055 Radical SAM superfamily IT971_06725 PF07992 Pyridine nucleotide-disulphide oxidoreductase IT971_06730 PF02525 Flavodoxin-like fold IT971_06735 PF03466 LysR substrate binding domain IT971_06735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_06740 PF01261 Xylose isomerase-like TIM barrel IT971_06750 PF13660 Domain of unknown function (DUF4147) IT971_06750 PF05161 MOFRL family IT971_06755 PF00392 Bacterial regulatory proteins, gntR family IT971_06755 PF07729 FCD domain IT971_06765 PF04107 Glutamate-cysteine ligase family 2(GCS2) IT971_06770 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) IT971_06785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_06785 PF08269 Cache domain IT971_06810 PF03594 Benzoate membrane transport protein IT971_06820 PF00691 OmpA family IT971_06820 PF13677 Membrane MotB of proton-channel complex MotA/MotB IT971_06835 PF00459 Inositol monophosphatase family IT971_06840 PF01132 Elongation factor P (EF-P) OB domain IT971_06840 PF09285 Elongation factor P, C-terminal IT971_06840 PF08207 Elongation factor P (EF-P) KOW-like domain IT971_06845 PF02581 Thiamine monophosphate synthase IT971_06855 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IT971_06855 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IT971_06860 PF00456 Transketolase, thiamine diphosphate binding domain IT971_06860 PF02780 Transketolase, C-terminal domain IT971_06860 PF02779 Transketolase, pyrimidine binding domain IT971_06870 PF05164 Cell division protein ZapA IT971_06880 PF13277 YmdB-like protein IT971_06885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_06890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_06895 PF01709 Transcriptional regulator IT971_06900 PF02075 Crossover junction endodeoxyribonuclease RuvC IT971_06905 PF07499 RuvA, C-terminal domain IT971_06905 PF01330 RuvA N terminal domain IT971_06910 PF05491 RuvB C-terminal winged helix domain IT971_06910 PF05496 Holliday junction DNA helicase RuvB P-loop domain IT971_06910 PF17864 RuvB AAA lid domain IT971_06915 PF03061 Thioesterase superfamily IT971_06920 PF01618 MotA/TolQ/ExbB proton channel family IT971_06925 PF02472 Biopolymer transport protein ExbD/TolR IT971_06935 PF04052 TolB amino-terminal domain IT971_06935 PF07676 WD40-like Beta Propeller Repeat IT971_06950 PF01171 PP-loop family IT971_06955 PF00004 ATPase family associated with various cellular activities (AAA) IT971_06955 PF17862 AAA+ lid domain IT971_06955 PF06480 FtsH Extracellular IT971_06955 PF01434 Peptidase family M41 IT971_06960 PF00809 Pterin binding enzyme IT971_06975 PF00582 Universal stress protein family IT971_06975 PF13493 Domain of unknown function (DUF4118) IT971_06975 PF02702 Osmosensitive K+ channel His kinase sensor domain IT971_06975 PF00512 His Kinase A (phospho-acceptor) domain IT971_06975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_06980 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IT971_06980 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IT971_06980 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IT971_06980 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IT971_06985 PF02581 Thiamine monophosphate synthase IT971_06985 PF08543 Phosphomethylpyrimidine kinase IT971_07010 PF00920 Dehydratase family IT971_07020 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IT971_07020 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IT971_07025 PF01037 Lrp/AsnC ligand binding domain IT971_07045 PF00528 Binding-protein-dependent transport system inner membrane component IT971_07050 PF00528 Binding-protein-dependent transport system inner membrane component IT971_07055 PF08402 TOBE domain IT971_07055 PF00005 ABC transporter IT971_07060 PF13416 Bacterial extracellular solute-binding protein IT971_07065 PF00120 Glutamine synthetase, catalytic domain IT971_07075 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IT971_07075 PF13378 Enolase C-terminal domain-like IT971_07080 PF00990 Diguanylate cyclase, GGDEF domain IT971_07080 PF00072 Response regulator receiver domain IT971_07105 PF04193 PQ loop repeat IT971_07110 PF07729 FCD domain IT971_07110 PF00392 Bacterial regulatory proteins, gntR family IT971_07115 PF00497 Bacterial extracellular solute-binding proteins, family 3 IT971_07120 PF00528 Binding-protein-dependent transport system inner membrane component IT971_07125 PF00005 ABC transporter IT971_07130 PF00266 Aminotransferase class-V IT971_07135 PF01979 Amidohydrolase family IT971_07135 PF00449 Urease alpha-subunit, N-terminal domain IT971_07145 PF00005 ABC transporter IT971_07150 PF13533 Biotin-lipoyl like IT971_07160 PF00563 EAL domain IT971_07160 PF13426 PAS domain IT971_07160 PF00990 Diguanylate cyclase, GGDEF domain IT971_07170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_07170 PF08447 PAS fold IT971_07170 PF13426 PAS domain IT971_07175 PF00202 Aminotransferase class-III IT971_07180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_07180 PF03466 LysR substrate binding domain IT971_07195 PF02913 FAD linked oxidases, C-terminal domain IT971_07195 PF01565 FAD binding domain IT971_07195 PF13183 4Fe-4S dicluster domain IT971_07210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_07210 PF03466 LysR substrate binding domain IT971_07215 PF13505 Outer membrane protein beta-barrel domain IT971_07230 PF14602 Hexapeptide repeat of succinyl-transferase IT971_07230 PF12464 Maltose acetyltransferase IT971_07245 PF00072 Response regulator receiver domain IT971_07245 PF00486 Transcriptional regulatory protein, C terminal IT971_07250 PF00512 His Kinase A (phospho-acceptor) domain IT971_07250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_07260 PF00356 Bacterial regulatory proteins, lacI family IT971_07280 PF00005 ABC transporter IT971_07285 PF00149 Calcineurin-like phosphoesterase IT971_07290 PF01494 FAD binding domain IT971_07295 PF00893 Small Multidrug Resistance protein IT971_07335 PF00884 Sulfatase IT971_07335 PF08019 Phosphoethanolamine transferase EptA/EptB IT971_07340 PF00440 Bacterial regulatory proteins, tetR family IT971_07340 PF08359 YsiA-like protein, C-terminal region IT971_07345 PF01894 Uncharacterised protein family UPF0047 IT971_07380 PF08471 Class II vitamin B12-dependent ribonucleotide reductase IT971_07380 PF02867 Ribonucleotide reductase, barrel domain IT971_07400 PF09923 Uncharacterized protein conserved in bacteria (DUF2155) IT971_07405 PF04264 YceI-like domain IT971_07410 PF01292 Prokaryotic cytochrome b561 IT971_07415 PF04264 YceI-like domain IT971_07420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_07420 PF08269 Cache domain IT971_07425 PF02230 Phospholipase/Carboxylesterase IT971_07430 PF01554 MatE IT971_07435 PF01037 Lrp/AsnC ligand binding domain IT971_07445 PF02082 Transcriptional regulator IT971_07450 PF00270 DEAD/DEAH box helicase IT971_07450 PF00271 Helicase conserved C-terminal domain IT971_07475 PF01292 Prokaryotic cytochrome b561 IT971_07480 PF04960 Glutaminase IT971_07485 PF00204 DNA gyrase B IT971_07485 PF01751 Toprim domain IT971_07485 PF00986 DNA gyrase B subunit, carboxyl terminus IT971_07485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_07490 PF03061 Thioesterase superfamily IT971_07505 PF00106 short chain dehydrogenase IT971_07510 PF12833 Helix-turn-helix domain IT971_07510 PF10114 Sensory domain found in PocR IT971_07520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IT971_07520 PF00005 ABC transporter IT971_07525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IT971_07525 PF00005 ABC transporter IT971_07530 PF00528 Binding-protein-dependent transport system inner membrane component IT971_07530 PF12911 N-terminal TM domain of oligopeptide transport permease C IT971_07535 PF00528 Binding-protein-dependent transport system inner membrane component IT971_07540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IT971_07565 PF02954 Bacterial regulatory protein, Fis family IT971_07565 PF00072 Response regulator receiver domain IT971_07565 PF00158 Sigma-54 interaction domain IT971_07570 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IT971_07575 PF00224 Pyruvate kinase, barrel domain IT971_07575 PF02887 Pyruvate kinase, alpha/beta domain IT971_07595 PF01965 DJ-1/PfpI family IT971_07600 PF00924 Mechanosensitive ion channel IT971_07600 PF05552 Conserved TM helix IT971_07615 PF13380 CoA binding domain IT971_07620 PF01794 Ferric reductase like transmembrane component IT971_07630 PF00378 Enoyl-CoA hydratase/isomerase IT971_07655 PF00572 Ribosomal protein L13 IT971_07660 PF00380 Ribosomal protein S9/S16 IT971_07665 PF01070 FMN-dependent dehydrogenase IT971_07680 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IT971_07695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IT971_07695 PF00205 Thiamine pyrophosphate enzyme, central domain IT971_07695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IT971_07710 PF01209 ubiE/COQ5 methyltransferase family IT971_07730 PF01118 Semialdehyde dehydrogenase, NAD binding domain IT971_07730 PF02774 Semialdehyde dehydrogenase, dimerisation domain IT971_07735 PF00155 Aminotransferase class I and II IT971_07735 PF00392 Bacterial regulatory proteins, gntR family IT971_07740 PF00892 EamA-like transporter family IT971_07750 PF00132 Bacterial transferase hexapeptide (six repeats) IT971_07760 PF03150 Di-haem cytochrome c peroxidase IT971_07765 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IT971_07765 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IT971_07785 PF00155 Aminotransferase class I and II IT971_07790 PF01842 ACT domain IT971_07790 PF00742 Homoserine dehydrogenase IT971_07790 PF03447 Homoserine dehydrogenase, NAD binding domain IT971_07795 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IT971_07800 PF00012 Hsp70 protein IT971_07815 PF01368 DHH family IT971_07815 PF10141 Single-strand DNA-specific exonuclease, C terminal domain IT971_07815 PF17768 RecJ OB domain IT971_07815 PF02272 DHHA1 domain IT971_07830 PF07690 Major Facilitator Superfamily IT971_07850 PF00817 impB/mucB/samB family IT971_07850 PF11799 impB/mucB/samB family C-terminal domain IT971_07870 PF12706 Beta-lactamase superfamily domain IT971_07875 PF00691 OmpA family IT971_07875 PF13677 Membrane MotB of proton-channel complex MotA/MotB IT971_07880 PF01618 MotA/TolQ/ExbB proton channel family IT971_07885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_07900 PF00156 Phosphoribosyl transferase domain IT971_07920 PF01053 Cys/Met metabolism PLP-dependent enzyme IT971_07925 PF01266 FAD dependent oxidoreductase IT971_07930 PF12706 Beta-lactamase superfamily domain IT971_07935 PF09084 NMT1/THI5 like IT971_07940 PF00528 Binding-protein-dependent transport system inner membrane component IT971_07945 PF00005 ABC transporter IT971_07950 PF08240 Alcohol dehydrogenase GroES-like domain IT971_07950 PF00107 Zinc-binding dehydrogenase IT971_07960 PF02515 CoA-transferase family III IT971_07965 PF00285 Citrate synthase, C-terminal domain IT971_07995 PF00850 Histone deacetylase domain IT971_08105 PF08275 DNA primase catalytic core, N-terminal domain IT971_08105 PF01807 CHC2 zinc finger IT971_08105 PF10410 DnaB-helicase binding domain of primase IT971_08105 PF08278 DNA primase DnaG DnaB-binding IT971_08170 PF01343 Peptidase family S49 IT971_08245 PF07157 DNA circularisation protein N-terminus IT971_08310 PF00497 Bacterial extracellular solute-binding proteins, family 3 IT971_08310 PF01464 Transglycosylase SLT domain IT971_08385 PF00248 Aldo/keto reductase family IT971_08390 PF02492 CobW/HypB/UreG, nucleotide-binding domain IT971_08390 PF07683 Cobalamin synthesis protein cobW C-terminal domain IT971_08395 PF01502 Phosphoribosyl-AMP cyclohydrolase IT971_08405 PF00005 ABC transporter IT971_08410 PF00950 ABC 3 transport family IT971_08415 PF01842 ACT domain IT971_08415 PF00742 Homoserine dehydrogenase IT971_08415 PF03447 Homoserine dehydrogenase, NAD binding domain IT971_08430 PF01053 Cys/Met metabolism PLP-dependent enzyme IT971_08435 PF00291 Pyridoxal-phosphate dependent enzyme IT971_08440 PF01783 Ribosomal L32p protein family IT971_08455 PF00581 Rhodanese-like domain IT971_08460 PF01411 tRNA synthetases class II (A) IT971_08460 PF02272 DHHA1 domain IT971_08460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IT971_08500 PF02652 L-lactate permease IT971_08505 PF00296 Luciferase-like monooxygenase IT971_08515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_08515 PF03466 LysR substrate binding domain IT971_08520 PF07690 Major Facilitator Superfamily IT971_08525 PF00291 Pyridoxal-phosphate dependent enzyme IT971_08530 PF00293 NUDIX domain IT971_08535 PF07694 5TMR of 5TMR-LYT IT971_08535 PF00990 Diguanylate cyclase, GGDEF domain IT971_08540 PF00583 Acetyltransferase (GNAT) family IT971_08545 PF07687 Peptidase dimerisation domain IT971_08545 PF01546 Peptidase family M20/M25/M40 IT971_08550 PF00684 DnaJ central domain IT971_08550 PF01556 DnaJ C terminal domain IT971_08550 PF00226 DnaJ domain IT971_08560 PF00444 Ribosomal protein L36 IT971_08565 PF00211 Adenylate and Guanylate cyclase catalytic domain IT971_08570 PF00211 Adenylate and Guanylate cyclase catalytic domain IT971_08570 PF00672 HAMP domain IT971_08580 PF16653 Saccharopine dehydrogenase C-terminal domain IT971_08580 PF03435 Saccharopine dehydrogenase NADP binding domain IT971_08600 PF01925 Sulfite exporter TauE/SafE IT971_08605 PF01206 Sulfurtransferase TusA IT971_08610 PF13673 Acetyltransferase (GNAT) domain IT971_08620 PF03707 Bacterial signalling protein N terminal repeat IT971_08620 PF00990 Diguanylate cyclase, GGDEF domain IT971_08620 PF00563 EAL domain IT971_08630 PF00990 Diguanylate cyclase, GGDEF domain IT971_08645 PF05362 Lon protease (S16) C-terminal proteolytic domain IT971_08645 PF13654 AAA domain IT971_08650 PF00392 Bacterial regulatory proteins, gntR family IT971_08650 PF00155 Aminotransferase class I and II IT971_08660 PF00291 Pyridoxal-phosphate dependent enzyme IT971_08670 PF02567 Phenazine biosynthesis-like protein IT971_08675 PF02080 TrkA-C domain IT971_08675 PF03600 Citrate transporter IT971_08685 PF13393 Histidyl-tRNA synthetase IT971_08690 PF00709 Adenylosuccinate synthetase IT971_08705 PF04542 Sigma-70 region 2 IT971_08705 PF04545 Sigma-70, region 4 IT971_08705 PF00140 Sigma-70 factor, region 1.2 IT971_08710 PF00849 RNA pseudouridylate synthase IT971_08725 PF13439 Glycosyltransferase Family 4 IT971_08730 PF12802 MarR family IT971_08735 PF00664 ABC transporter transmembrane region IT971_08735 PF00005 ABC transporter IT971_08740 PF00529 HlyD membrane-fusion protein of T1SS IT971_08750 PF00535 Glycosyl transferase family 2 IT971_08750 PF00534 Glycosyl transferases group 1 IT971_08755 PF08241 Methyltransferase domain IT971_08790 PF01370 NAD dependent epimerase/dehydratase family IT971_08805 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IT971_08810 PF11871 Domain of unknown function (DUF3391) IT971_08810 PF01966 HD domain IT971_08815 PF00005 ABC transporter IT971_08815 PF00571 CBS domain IT971_08820 PF00528 Binding-protein-dependent transport system inner membrane component IT971_08825 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IT971_08830 PF00528 Binding-protein-dependent transport system inner membrane component IT971_08835 PF00571 CBS domain IT971_08835 PF00005 ABC transporter IT971_08855 PF13416 Bacterial extracellular solute-binding protein IT971_08860 PF13416 Bacterial extracellular solute-binding protein IT971_08870 PF03453 MoeA N-terminal region (domain I and II) IT971_08870 PF03454 MoeA C-terminal region (domain IV) IT971_08870 PF00994 Probable molybdopterin binding domain IT971_08875 PF10996 Beta-Casp domain IT971_08875 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IT971_08875 PF00753 Metallo-beta-lactamase superfamily IT971_08885 PF00534 Glycosyl transferases group 1 IT971_08890 PF13579 Glycosyl transferase 4-like domain IT971_08890 PF00534 Glycosyl transferases group 1 IT971_08915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IT971_08915 PF00005 ABC transporter IT971_08920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IT971_08925 PF00528 Binding-protein-dependent transport system inner membrane component IT971_08930 PF00528 Binding-protein-dependent transport system inner membrane component IT971_08930 PF12911 N-terminal TM domain of oligopeptide transport permease C IT971_08935 PF07690 Major Facilitator Superfamily IT971_08945 PF12832 MFS_1 like family IT971_08950 PF01266 FAD dependent oxidoreductase IT971_08950 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IT971_08955 PF01207 Dihydrouridine synthase (Dus) IT971_08960 PF03960 ArsC family IT971_08965 PF13419 Haloacid dehalogenase-like hydrolase IT971_08990 PF00471 Ribosomal protein L33 IT971_08995 PF13180 PDZ domain IT971_08995 PF03572 Peptidase family S41 IT971_09010 PF08461 Ribonuclease R winged-helix domain IT971_09010 PF08206 Ribonuclease B OB domain IT971_09010 PF00773 RNB domain IT971_09010 PF00575 S1 RNA binding domain IT971_09010 PF17876 Cold shock domain IT971_09015 PF13368 Topoisomerase C-terminal repeat IT971_09015 PF01131 DNA topoisomerase IT971_09015 PF01751 Toprim domain IT971_09015 PF01396 Topoisomerase DNA binding C4 zinc finger IT971_09020 PF02481 DNA recombination-mediator protein A IT971_09020 PF17782 DprA winged helix domain IT971_09035 PF07290 Protein of unknown function (DUF1449) IT971_09040 PF15975 Flotillin IT971_09040 PF01145 SPFH domain / Band 7 family IT971_09045 PF02660 Glycerol-3-phosphate acyltransferase IT971_09050 PF01979 Amidohydrolase family IT971_09055 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IT971_09055 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IT971_09070 PF03652 Holliday junction resolvase IT971_09075 PF02686 Glu-tRNAGln amidotransferase C subunit IT971_09080 PF01425 Amidase IT971_09085 PF02637 GatB domain IT971_09085 PF02934 GatB/GatE catalytic domain IT971_09095 PF00672 HAMP domain IT971_09095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_09105 PF07690 Major Facilitator Superfamily IT971_09110 PF00403 Heavy-metal-associated domain IT971_09115 PF01965 DJ-1/PfpI family IT971_09120 PF03466 LysR substrate binding domain IT971_09120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_09125 PF00265 Thymidine kinase IT971_09130 PF01810 LysE type translocator IT971_09135 PF03466 LysR substrate binding domain IT971_09135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_09140 PF04403 Paraquat-inducible protein A IT971_09145 PF02470 MlaD protein IT971_09160 PF12833 Helix-turn-helix domain IT971_09160 PF01965 DJ-1/PfpI family IT971_09165 PF07690 Major Facilitator Superfamily IT971_09305 PF01555 DNA methylase IT971_09335 PF01807 CHC2 zinc finger IT971_09335 PF08275 DNA primase catalytic core, N-terminal domain IT971_09335 PF10410 DnaB-helicase binding domain of primase IT971_09370 PF03354 Phage Terminase IT971_09380 PF00574 Clp protease IT971_09550 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_09560 PF00120 Glutamine synthetase, catalytic domain IT971_09560 PF03951 Glutamine synthetase, beta-Grasp domain IT971_09565 PF00171 Aldehyde dehydrogenase family IT971_09570 PF00465 Iron-containing alcohol dehydrogenase IT971_09575 PF00117 Glutamine amidotransferase class-I IT971_09575 PF00958 GMP synthase C terminal domain IT971_09580 PF00294 pfkB family carbohydrate kinase IT971_09585 PF00149 Calcineurin-like phosphoesterase IT971_09585 PF02872 5'-nucleotidase, C-terminal domain IT971_09590 PF02608 ABC transporter substrate-binding protein PnrA-like IT971_09595 PF00005 ABC transporter IT971_09605 PF02653 Branched-chain amino acid transport system / permease component IT971_09620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IT971_09625 PF01048 Phosphorylase superfamily IT971_09630 PF02885 Glycosyl transferase family, helical bundle domain IT971_09630 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain IT971_09630 PF00591 Glycosyl transferase family, a/b domain IT971_09635 PF00732 GMC oxidoreductase IT971_09635 PF05199 GMC oxidoreductase IT971_09640 PF00939 Sodium:sulfate symporter transmembrane region IT971_09645 PF00455 DeoR C terminal sensor domain IT971_09645 PF08220 DeoR-like helix-turn-helix domain IT971_09650 PF09383 NIL domain IT971_09650 PF00005 ABC transporter IT971_09655 PF00005 ABC transporter IT971_09660 PF00528 Binding-protein-dependent transport system inner membrane component IT971_09665 PF00528 Binding-protein-dependent transport system inner membrane component IT971_09670 PF00497 Bacterial extracellular solute-binding proteins, family 3 IT971_09675 PF00501 AMP-binding enzyme IT971_09675 PF13193 AMP-binding enzyme C-terminal domain IT971_09680 PF00994 Probable molybdopterin binding domain IT971_09690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_09690 PF16591 Helical bimodular sensor domain IT971_09690 PF00672 HAMP domain IT971_09700 PF09339 IclR helix-turn-helix domain IT971_09700 PF01614 Bacterial transcriptional regulator IT971_09705 PF01625 Peptide methionine sulfoxide reductase IT971_09730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IT971_09730 PF03129 Anticodon binding domain IT971_09730 PF02824 TGS domain IT971_09730 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IT971_09735 PF07690 Major Facilitator Superfamily IT971_09760 PF05698 Bacterial trigger factor protein (TF) C-terminus IT971_09765 PF03883 Peroxide stress protein YaaA IT971_09770 PF02885 Glycosyl transferase family, helical bundle domain IT971_09770 PF00591 Glycosyl transferase family, a/b domain IT971_09780 PF00005 ABC transporter IT971_09795 PF01891 Cobalt uptake substrate-specific transmembrane region IT971_09805 PF07549 SecD/SecF GG Motif IT971_09805 PF02355 Protein export membrane protein IT971_09825 PF00583 Acetyltransferase (GNAT) family IT971_09825 PF13380 CoA binding domain IT971_09825 PF13607 Succinyl-CoA ligase like flavodoxin domain IT971_09840 PF00248 Aldo/keto reductase family IT971_09860 PF00581 Rhodanese-like domain IT971_09865 PF02321 Outer membrane efflux protein IT971_09875 PF00133 tRNA synthetases class I (I, L, M and V) IT971_09875 PF10458 Valyl tRNA synthetase tRNA binding arm IT971_09875 PF08264 Anticodon-binding domain of tRNA IT971_09880 PF04715 Anthranilate synthase component I, N terminal region IT971_09880 PF00425 chorismate binding enzyme IT971_09885 PF00117 Glutamine amidotransferase class-I IT971_09890 PF01063 Amino-transferase class IV IT971_09900 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IT971_09910 PF01521 Iron-sulphur cluster biosynthesis IT971_09915 PF00750 tRNA synthetases class I (R) IT971_09915 PF05746 DALR anticodon binding domain IT971_09915 PF03485 Arginyl tRNA synthetase N terminal domain IT971_09925 PF00933 Glycosyl hydrolase family 3 N terminal domain IT971_09930 PF02163 Peptidase family M50 IT971_09935 PF02616 Segregation and condensation protein ScpA IT971_09940 PF04079 Segregation and condensation complex subunit ScpB IT971_09945 PF00005 ABC transporter IT971_09950 PF02416 mttA/Hcf106 family IT971_09955 PF02416 mttA/Hcf106 family IT971_09960 PF00902 Sec-independent protein translocase protein (TatC) IT971_09965 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IT971_09965 PF02403 Seryl-tRNA synthetase N-terminal domain IT971_09970 PF01975 Survival protein SurE IT971_09980 PF01476 LysM domain IT971_09980 PF01551 Peptidase family M23 IT971_09990 PF02699 Preprotein translocase subunit IT971_09995 PF02355 Protein export membrane protein IT971_10000 PF02355 Protein export membrane protein IT971_10000 PF07549 SecD/SecF GG Motif IT971_10010 PF04430 Protein of unknown function (DUF498/DUF598) IT971_10015 PF01593 Flavin containing amine oxidoreductase IT971_10020 PF00924 Mechanosensitive ion channel IT971_10035 PF01134 Glucose inhibited division protein A IT971_10045 PF17760 UvrA interaction domain IT971_10045 PF17755 UvrA DNA-binding domain IT971_10050 PF01116 Fructose-bisphosphate aldolase class-II IT971_10055 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IT971_10055 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IT971_10060 PF01979 Amidohydrolase family IT971_10065 PF01380 SIS domain IT971_10070 PF00392 Bacterial regulatory proteins, gntR family IT971_10070 PF07702 UTRA domain IT971_10075 PF01869 BadF/BadG/BcrA/BcrD ATPase family IT971_10080 PF13580 SIS domain IT971_10090 PF00528 Binding-protein-dependent transport system inner membrane component IT971_10095 PF00528 Binding-protein-dependent transport system inner membrane component IT971_10100 PF03459 TOBE domain IT971_10100 PF17912 MalK OB fold domain IT971_10100 PF00005 ABC transporter IT971_10105 PF13416 Bacterial extracellular solute-binding protein IT971_10110 PF00005 ABC transporter IT971_10110 PF08402 TOBE domain IT971_10115 PF00528 Binding-protein-dependent transport system inner membrane component IT971_10120 PF00528 Binding-protein-dependent transport system inner membrane component IT971_10125 PF13416 Bacterial extracellular solute-binding protein IT971_10130 PF00528 Binding-protein-dependent transport system inner membrane component IT971_10135 PF00528 Binding-protein-dependent transport system inner membrane component IT971_10140 PF17912 MalK OB fold domain IT971_10140 PF00005 ABC transporter IT971_10145 PF13185 GAF domain IT971_10150 PF00436 Single-strand binding protein family IT971_10165 PF02810 SEC-C motif IT971_10170 PF04542 Sigma-70 region 2 IT971_10170 PF00140 Sigma-70 factor, region 1.2 IT971_10170 PF04545 Sigma-70, region 4 IT971_10175 PF13344 Haloacid dehalogenase-like hydrolase IT971_10175 PF00293 NUDIX domain IT971_10190 PF00270 DEAD/DEAH box helicase IT971_10190 PF17191 RecG wedge domain IT971_10190 PF00271 Helicase conserved C-terminal domain IT971_10195 PF03937 Flavinator of succinate dehydrogenase IT971_10200 PF00270 DEAD/DEAH box helicase IT971_10200 PF00271 Helicase conserved C-terminal domain IT971_10200 PF03461 TRCF domain IT971_10200 PF02559 CarD-like/TRCF domain IT971_10200 PF17757 UvrB interaction domain IT971_10210 PF01676 Metalloenzyme superfamily IT971_10215 PF01791 DeoC/LacD family aldolase IT971_10225 PF00528 Binding-protein-dependent transport system inner membrane component IT971_10230 PF00528 Binding-protein-dependent transport system inner membrane component IT971_10235 PF00497 Bacterial extracellular solute-binding proteins, family 3 IT971_10240 PF00005 ABC transporter IT971_10250 PF00672 HAMP domain IT971_10250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_10250 PF02743 Cache domain IT971_10260 PF13406 Transglycosylase SLT domain IT971_10265 PF03330 Lytic transglycolase IT971_10265 PF05036 Sporulation related domain IT971_10270 PF00768 D-alanyl-D-alanine carboxypeptidase IT971_10270 PF07943 Penicillin-binding protein 5, C-terminal domain IT971_10275 PF02223 Thymidylate kinase IT971_10280 PF09115 DNA polymerase III, delta subunit, C terminal IT971_10285 PF09334 tRNA synthetases class I (M) IT971_10285 PF08264 Anticodon-binding domain of tRNA IT971_10290 PF01026 TatD related DNase IT971_10295 PF03099 Biotin/lipoate A/B protein ligase family IT971_10295 PF12706 Beta-lactamase superfamily domain IT971_10305 PF05284 Protein of unknown function (DUF736) IT971_10385 PF01526 Tn3 transposase DDE domain IT971_10385 PF13700 Domain of unknown function (DUF4158) IT971_10390 PF09278 MerR, DNA binding IT971_10390 PF00376 MerR family regulatory protein IT971_10405 PF03466 LysR substrate binding domain IT971_10405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_10410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IT971_10410 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IT971_10415 PF00528 Binding-protein-dependent transport system inner membrane component IT971_10425 PF00005 ABC transporter IT971_10460 PF01047 MarR family IT971_10465 PF00583 Acetyltransferase (GNAT) family IT971_10470 PF00202 Aminotransferase class-III IT971_10475 PF06339 Ectoine synthase IT971_10480 PF00696 Amino acid kinase family IT971_10480 PF13840 ACT domain IT971_10485 PF03819 MazG nucleotide pyrophosphohydrolase domain IT971_10490 PF00459 Inositol monophosphatase family IT971_10495 PF13167 GTP-binding GTPase N-terminal IT971_10495 PF16360 GTP-binding GTPase Middle Region IT971_10495 PF01926 50S ribosome-binding GTPase IT971_10500 PF17209 Hfq protein IT971_10510 PF02254 TrkA-N domain IT971_10510 PF02080 TrkA-C domain IT971_10515 PF00072 Response regulator receiver domain IT971_10515 PF02954 Bacterial regulatory protein, Fis family IT971_10515 PF00158 Sigma-54 interaction domain IT971_10520 PF00672 HAMP domain IT971_10520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_10525 PF02954 Bacterial regulatory protein, Fis family IT971_10525 PF00072 Response regulator receiver domain IT971_10525 PF00158 Sigma-54 interaction domain IT971_10530 PF00989 PAS fold IT971_10530 PF00512 His Kinase A (phospho-acceptor) domain IT971_10530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_10535 PF01207 Dihydrouridine synthase (Dus) IT971_10540 PF01578 Cytochrome C assembly protein IT971_10545 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IT971_10545 PF02542 YgbB family IT971_10550 PF04279 Intracellular septation protein A IT971_10555 PF03091 CutA1 divalent ion tolerance protein IT971_10575 PF13411 MerR HTH family regulatory protein IT971_10580 PF00216 Bacterial DNA-binding protein IT971_10585 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IT971_10585 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IT971_10590 PF02504 Fatty acid synthesis protein IT971_10610 PF02769 AIR synthase related protein, C-terminal domain IT971_10610 PF00586 AIR synthase related protein, N-terminal domain IT971_10615 PF01029 NusB family IT971_10620 PF00885 6,7-dimethyl-8-ribityllumazine synthase IT971_10625 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IT971_10625 PF00925 GTP cyclohydrolase II IT971_10630 PF00677 Lumazine binding domain IT971_10635 PF01872 RibD C-terminal domain IT971_10635 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IT971_10640 PF03477 ATP cone domain IT971_10645 PF00464 Serine hydroxymethyltransferase IT971_10650 PF02502 Ribose/Galactose Isomerase IT971_10655 PF05443 ROS/MUCR transcriptional regulator protein IT971_10660 PF13458 Periplasmic binding protein IT971_10670 PF00005 ABC transporter IT971_10675 PF12399 Branched-chain amino acid ATP-binding cassette transporter IT971_10675 PF00005 ABC transporter IT971_10680 PF11862 Domain of unknown function (DUF3382) IT971_10680 PF02653 Branched-chain amino acid transport system / permease component IT971_10685 PF02653 Branched-chain amino acid transport system / permease component IT971_10695 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IT971_10695 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IT971_10700 PF00378 Enoyl-CoA hydratase/isomerase IT971_10705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IT971_10705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IT971_10705 PF02770 Acyl-CoA dehydrogenase, middle domain IT971_10710 PF01053 Cys/Met metabolism PLP-dependent enzyme IT971_10715 PF08220 DeoR-like helix-turn-helix domain IT971_10715 PF00455 DeoR C terminal sensor domain IT971_10725 PF00490 Delta-aminolevulinic acid dehydratase IT971_10730 PF13419 Haloacid dehalogenase-like hydrolase IT971_10740 PF00501 AMP-binding enzyme IT971_10740 PF13193 AMP-binding enzyme C-terminal domain IT971_10750 PF00171 Aldehyde dehydrogenase family IT971_10755 PF00291 Pyridoxal-phosphate dependent enzyme IT971_10755 PF13291 ACT domain IT971_10760 PF01613 Flavin reductase like domain IT971_10765 PF01618 MotA/TolQ/ExbB proton channel family IT971_10770 PF00691 OmpA family IT971_10770 PF13677 Membrane MotB of proton-channel complex MotA/MotB IT971_10775 PF04377 Arginine-tRNA-protein transferase, C terminus IT971_10775 PF04376 Arginine-tRNA-protein transferase, N terminus IT971_10780 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_10785 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_10795 PF00521 DNA gyrase/topoisomerase IV, subunit A IT971_10795 PF03989 DNA gyrase C-terminal domain, beta-propeller IT971_10800 PF11967 Recombination protein O N terminal IT971_10800 PF02565 Recombination protein O C terminal IT971_10815 PF07650 KH domain IT971_10815 PF01926 50S ribosome-binding GTPase IT971_10820 PF00035 Double-stranded RNA binding motif IT971_10820 PF14622 Ribonuclease-III-like IT971_10825 PF10502 Signal peptidase, peptidase S26 IT971_10830 PF01648 4'-phosphopantetheinyl transferase superfamily IT971_10835 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IT971_10845 PF04607 Region found in RelA / SpoT proteins IT971_10845 PF02824 TGS domain IT971_10845 PF13291 ACT domain IT971_10850 PF01192 RNA polymerase Rpb6 IT971_10865 PF03167 Uracil DNA glycosylase superfamily IT971_10870 PF16124 RecQ zinc-binding IT971_10870 PF09382 RQC domain IT971_10870 PF00570 HRDC domain IT971_10870 PF00271 Helicase conserved C-terminal domain IT971_10870 PF00270 DEAD/DEAH box helicase IT971_10875 PF00255 Glutathione peroxidase IT971_10880 PF00174 Oxidoreductase molybdopterin binding domain IT971_10885 PF01668 SmpB protein IT971_10890 PF00701 Dihydrodipicolinate synthetase family IT971_10895 PF01464 Transglycosylase SLT domain IT971_10895 PF10145 Phage-related minor tail protein IT971_10895 PF01551 Peptidase family M23 IT971_10900 PF13419 Haloacid dehalogenase-like hydrolase IT971_10910 PF01551 Peptidase family M23 IT971_10915 PF04608 Phosphatidylglycerophosphatase A IT971_10920 PF02464 Competence-damaged protein IT971_10920 PF00994 Probable molybdopterin binding domain IT971_10925 PF03364 Polyketide cyclase / dehydrase and lipid transport IT971_10930 PF04055 Radical SAM superfamily IT971_10935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IT971_10935 PF07992 Pyridine nucleotide-disulphide oxidoreductase IT971_10940 PF00364 Biotin-requiring enzyme IT971_10940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IT971_10940 PF02817 e3 binding domain IT971_10945 PF02779 Transketolase, pyrimidine binding domain IT971_10945 PF02780 Transketolase, C-terminal domain IT971_10945 PF00364 Biotin-requiring enzyme IT971_10950 PF00676 Dehydrogenase E1 component IT971_10955 PF04977 Septum formation initiator IT971_10960 PF03952 Enolase, N-terminal domain IT971_10960 PF00113 Enolase, C-terminal TIM barrel domain IT971_10965 PF00793 DAHP synthetase I family IT971_10970 PF06418 CTP synthase N-terminus IT971_10970 PF00117 Glutamine amidotransferase class-I IT971_10980 PF00121 Triosephosphate isomerase IT971_10985 PF13145 PPIC-type PPIASE domain IT971_10990 PF04715 Anthranilate synthase component I, N terminal region IT971_10990 PF00425 chorismate binding enzyme IT971_10995 PF04748 Divergent polysaccharide deacetylase IT971_11000 PF00117 Glutamine amidotransferase class-I IT971_11005 PF00591 Glycosyl transferase family, a/b domain IT971_11005 PF02885 Glycosyl transferase family, helical bundle domain IT971_11010 PF00218 Indole-3-glycerol phosphate synthase IT971_11015 PF01967 MoaC family IT971_11020 PF00717 Peptidase S24-like IT971_11020 PF01726 LexA DNA binding domain IT971_11025 PF03772 Competence protein IT971_11025 PF13567 Domain of unknown function (DUF4131) IT971_11025 PF00753 Metallo-beta-lactamase superfamily IT971_11030 PF00749 tRNA synthetases class I (E and Q), catalytic domain IT971_11035 PF00285 Citrate synthase, C-terminal domain IT971_11040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IT971_11045 PF02684 Lipid-A-disaccharide synthetase IT971_11050 PF06230 LpxI C-terminal domain IT971_11050 PF17930 LpxI N-terminal domain IT971_11055 PF00132 Bacterial transferase hexapeptide (six repeats) IT971_11055 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IT971_11060 PF07977 FabA-like domain IT971_11065 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IT971_11065 PF00132 Bacterial transferase hexapeptide (six repeats) IT971_11075 PF07244 Surface antigen variable number repeat IT971_11075 PF01103 Surface antigen IT971_11080 PF17820 PDZ domain IT971_11080 PF02163 Peptidase family M50 IT971_11085 PF13288 DXP reductoisomerase C-terminal domain IT971_11085 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IT971_11085 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IT971_11095 PF01255 Putative undecaprenyl diphosphate synthase IT971_11100 PF01765 Ribosome recycling factor IT971_11105 PF00696 Amino acid kinase family IT971_11110 PF00889 Elongation factor TS IT971_11115 PF00318 Ribosomal protein S2 IT971_11120 PF02811 PHP domain IT971_11120 PF14579 Helix-hairpin-helix motif IT971_11120 PF07733 Bacterial DNA polymerase III alpha NTPase domain IT971_11120 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IT971_11125 PF00005 ABC transporter IT971_11130 PF02687 FtsX-like permease family IT971_11130 PF12704 MacB-like periplasmic core domain IT971_11135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IT971_11135 PF03129 Anticodon binding domain IT971_11155 PF12706 Beta-lactamase superfamily domain IT971_11155 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IT971_11155 PF17770 Ribonuclease J C-terminal domain IT971_11160 PF03309 Type III pantothenate kinase IT971_11165 PF03099 Biotin/lipoate A/B protein ligase family IT971_11165 PF02237 Biotin protein ligase C terminal domain IT971_11170 PF00361 Proton-conducting membrane transporter IT971_11175 PF00361 Proton-conducting membrane transporter IT971_11175 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus IT971_11180 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IT971_11180 PF00361 Proton-conducting membrane transporter IT971_11185 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IT971_11190 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IT971_11195 PF12838 4Fe-4S dicluster domain IT971_11200 PF00146 NADH dehydrogenase IT971_11205 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal IT971_11205 PF00384 Molybdopterin oxidoreductase IT971_11205 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IT971_11210 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IT971_11210 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IT971_11210 PF10531 SLBB domain IT971_11220 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IT971_11225 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IT971_11230 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IT971_11235 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IT971_11245 PF14841 FliG middle domain IT971_11245 PF01706 FliG C-terminal domain IT971_11245 PF14842 FliG N-terminal domain IT971_11260 PF00216 Bacterial DNA-binding protein IT971_11265 PF00004 ATPase family associated with various cellular activities (AAA) IT971_11265 PF05362 Lon protease (S16) C-terminal proteolytic domain IT971_11265 PF02190 ATP-dependent protease La (LON) substrate-binding domain IT971_11270 PF10431 C-terminal, D2-small domain, of ClpB protein IT971_11270 PF07724 AAA domain (Cdc48 subfamily) IT971_11270 PF06689 ClpX C4-type zinc finger IT971_11275 PF00574 Clp protease IT971_11280 PF05697 Bacterial trigger factor protein (TF) IT971_11280 PF05698 Bacterial trigger factor protein (TF) C-terminus IT971_11280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IT971_11290 PF01256 Carbohydrate kinase IT971_11290 PF03853 YjeF-related protein N-terminus IT971_11295 PF01266 FAD dependent oxidoreductase IT971_11300 PF00512 His Kinase A (phospho-acceptor) domain IT971_11300 PF00989 PAS fold IT971_11300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_11315 PF00403 Heavy-metal-associated domain IT971_11320 PF00210 Ferritin-like domain IT971_11325 PF00210 Ferritin-like domain IT971_11330 PF04244 Deoxyribodipyrimidine photo-lyase-related protein IT971_11345 PF01547 Bacterial extracellular solute-binding protein IT971_11350 PF00528 Binding-protein-dependent transport system inner membrane component IT971_11355 PF00528 Binding-protein-dependent transport system inner membrane component IT971_11360 PF00005 ABC transporter IT971_11360 PF03459 TOBE domain IT971_11360 PF17912 MalK OB fold domain IT971_11365 PF00512 His Kinase A (phospho-acceptor) domain IT971_11365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_11365 PF00672 HAMP domain IT971_11370 PF00072 Response regulator receiver domain IT971_11370 PF00486 Transcriptional regulatory protein, C terminal IT971_11380 PF01593 Flavin containing amine oxidoreductase IT971_11390 PF00342 Phosphoglucose isomerase IT971_11395 PF00294 pfkB family carbohydrate kinase IT971_11405 PF00491 Arginase family IT971_11410 PF00171 Aldehyde dehydrogenase family IT971_11415 PF07883 Cupin domain IT971_11415 PF01381 Helix-turn-helix IT971_11420 PF00120 Glutamine synthetase, catalytic domain IT971_11425 PF00202 Aminotransferase class-III IT971_11430 PF01266 FAD dependent oxidoreductase IT971_11445 PF01266 FAD dependent oxidoreductase IT971_11450 PF03313 Serine dehydratase alpha chain IT971_11455 PF05199 GMC oxidoreductase IT971_11455 PF00732 GMC oxidoreductase IT971_11465 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IT971_11470 PF00528 Binding-protein-dependent transport system inner membrane component IT971_11475 PF00005 ABC transporter IT971_11475 PF00571 CBS domain IT971_11485 PF03466 LysR substrate binding domain IT971_11485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_11495 PF00528 Binding-protein-dependent transport system inner membrane component IT971_11505 PF00005 ABC transporter IT971_11505 PF08402 TOBE domain IT971_11510 PF00202 Aminotransferase class-III IT971_11515 PF05853 beta-keto acid cleavage enzyme IT971_11520 PF00850 Histone deacetylase domain IT971_11525 PF01266 FAD dependent oxidoreductase IT971_11530 PF01546 Peptidase family M20/M25/M40 IT971_11530 PF07687 Peptidase dimerisation domain IT971_11535 PF01042 Endoribonuclease L-PSP IT971_11555 PF02423 Ornithine cyclodeaminase/mu-crystallin family IT971_11560 PF07859 alpha/beta hydrolase fold IT971_11570 PF14031 Putative serine dehydratase domain IT971_11570 PF01168 Alanine racemase, N-terminal domain IT971_11575 PF07171 MlrC C-terminus IT971_11575 PF07364 Metallopeptidase family M81 IT971_11580 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_11585 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_11595 PF01418 Helix-turn-helix domain, rpiR family IT971_11595 PF02685 Glucokinase IT971_11595 PF01380 SIS domain IT971_11600 PF00294 pfkB family carbohydrate kinase IT971_11610 PF01103 Surface antigen IT971_11610 PF17243 POTRA domain TamA domain 1 IT971_11615 PF08443 RimK-like ATP-grasp domain IT971_11615 PF18030 RimK PreATP-grasp domain IT971_11625 PF01740 STAS domain IT971_11625 PF00916 Sulfate permease family IT971_11635 PF00753 Metallo-beta-lactamase superfamily IT971_11655 PF00206 Lyase IT971_11655 PF10397 Adenylosuccinate lyase C-terminus IT971_11660 PF00108 Thiolase, N-terminal domain IT971_11660 PF02803 Thiolase, C-terminal domain IT971_11665 PF01144 Coenzyme A transferase IT971_11670 PF01144 Coenzyme A transferase IT971_11680 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal IT971_11680 PF00775 Dioxygenase IT971_11685 PF02627 Carboxymuconolactone decarboxylase family IT971_11690 PF12146 Serine aminopeptidase, S33 IT971_11695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_11695 PF03466 LysR substrate binding domain IT971_11700 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_11710 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_11725 PF00528 Binding-protein-dependent transport system inner membrane component IT971_11730 PF00005 ABC transporter IT971_11750 PF07690 Major Facilitator Superfamily IT971_11760 PF04954 Siderophore-interacting protein IT971_11760 PF08021 Siderophore-interacting FAD-binding domain IT971_11790 PF00156 Phosphoribosyl transferase domain IT971_11805 PF01494 FAD binding domain IT971_11835 PF00128 Alpha amylase, catalytic domain IT971_11845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_11845 PF03466 LysR substrate binding domain IT971_11855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IT971_11855 PF00205 Thiamine pyrophosphate enzyme, central domain IT971_11855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IT971_11860 PF01614 Bacterial transcriptional regulator IT971_11860 PF09339 IclR helix-turn-helix domain IT971_11875 PF07690 Major Facilitator Superfamily IT971_11900 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ IT971_11905 PF04221 RelB antitoxin IT971_11915 PF00580 UvrD/REP helicase N-terminal domain IT971_11915 PF13361 UvrD-like helicase C-terminal domain IT971_11940 PF07729 FCD domain IT971_11940 PF00392 Bacterial regulatory proteins, gntR family IT971_11945 PF02653 Branched-chain amino acid transport system / permease component IT971_11950 PF02653 Branched-chain amino acid transport system / permease component IT971_11955 PF00005 ABC transporter IT971_11960 PF13407 Periplasmic binding protein domain IT971_11965 PF01263 Aldose 1-epimerase IT971_11975 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_11980 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_11980 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IT971_11985 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_11990 PF07729 FCD domain IT971_11990 PF00392 Bacterial regulatory proteins, gntR family IT971_12005 PF05114 Protein of unknown function (DUF692) IT971_12015 PF05199 GMC oxidoreductase IT971_12015 PF00732 GMC oxidoreductase IT971_12070 PF01070 FMN-dependent dehydrogenase IT971_12080 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_12085 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IT971_12090 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_12095 PF00701 Dihydrodipicolinate synthetase family IT971_12100 PF01565 FAD binding domain IT971_12100 PF02913 FAD linked oxidases, C-terminal domain IT971_12110 PF17432 Domain of unknown function (DUF3458_C) ARM repeats IT971_12110 PF11940 Domain of unknown function (DUF3458) Ig-like fold IT971_12110 PF01433 Peptidase family M1 domain IT971_12115 PF00196 Bacterial regulatory proteins, luxR family IT971_12115 PF00072 Response regulator receiver domain IT971_12125 PF01594 AI-2E family transporter IT971_12130 PF02311 AraC-like ligand binding domain IT971_12130 PF12833 Helix-turn-helix domain IT971_12140 PF01810 LysE type translocator IT971_12155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_12155 PF00512 His Kinase A (phospho-acceptor) domain IT971_12165 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_12170 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_12185 PF01965 DJ-1/PfpI family IT971_12185 PF12833 Helix-turn-helix domain IT971_12190 PF00593 TonB dependent receptor IT971_12190 PF07715 TonB-dependent Receptor Plug Domain IT971_12205 PF03544 Gram-negative bacterial TonB protein C-terminal IT971_12210 PF02472 Biopolymer transport protein ExbD/TolR IT971_12215 PF02472 Biopolymer transport protein ExbD/TolR IT971_12220 PF01618 MotA/TolQ/ExbB proton channel family IT971_12235 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IT971_12240 PF01467 Cytidylyltransferase-like IT971_12245 PF03989 DNA gyrase C-terminal domain, beta-propeller IT971_12245 PF00521 DNA gyrase/topoisomerase IV, subunit A IT971_12250 PF00892 EamA-like transporter family IT971_12275 PF01979 Amidohydrolase family IT971_12280 PF02463 RecF/RecN/SMC N terminal domain IT971_12295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IT971_12295 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IT971_12300 PF00155 Aminotransferase class I and II IT971_12305 PF00543 Nitrogen regulatory protein P-II IT971_12310 PF00120 Glutamine synthetase, catalytic domain IT971_12310 PF03951 Glutamine synthetase, beta-Grasp domain IT971_12315 PF05230 MASE2 domain IT971_12315 PF00990 Diguanylate cyclase, GGDEF domain IT971_12325 PF02566 OsmC-like protein IT971_12350 PF00962 Adenosine/AMP deaminase IT971_12365 PF07729 FCD domain IT971_12365 PF00392 Bacterial regulatory proteins, gntR family IT971_12370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_12375 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_12375 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IT971_12380 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_12385 PF00990 Diguanylate cyclase, GGDEF domain IT971_12385 PF00563 EAL domain IT971_12385 PF08448 PAS fold IT971_12395 PF01370 NAD dependent epimerase/dehydratase family IT971_12400 PF12833 Helix-turn-helix domain IT971_12410 PF01842 ACT domain IT971_12410 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IT971_12410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IT971_12425 PF16363 GDP-mannose 4,6 dehydratase IT971_12430 PF12833 Helix-turn-helix domain IT971_12430 PF12852 Cupin IT971_12440 PF03707 Bacterial signalling protein N terminal repeat IT971_12440 PF00990 Diguanylate cyclase, GGDEF domain IT971_12440 PF00563 EAL domain IT971_12440 PF13188 PAS domain IT971_12490 PF03070 TENA/THI-4/PQQC family IT971_12495 PF04384 Iron-sulphur cluster assembly IT971_12500 PF00111 2Fe-2S iron-sulfur cluster binding domain IT971_12505 PF00012 Hsp70 protein IT971_12510 PF07743 HSCB C-terminal oligomerisation domain IT971_12515 PF01521 Iron-sulphur cluster biosynthesis IT971_12520 PF01592 NifU-like N terminal domain IT971_12525 PF00266 Aminotransferase class-V IT971_12530 PF00266 Aminotransferase class-V IT971_12535 PF02082 Transcriptional regulator IT971_12540 PF00132 Bacterial transferase hexapeptide (six repeats) IT971_12540 PF06426 Serine acetyltransferase, N-terminal IT971_12545 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IT971_12550 PF03702 Anhydro-N-acetylmuramic acid kinase IT971_12555 PF00579 tRNA synthetases class I (W and Y) IT971_12565 PF08335 GlnD PII-uridylyltransferase IT971_12565 PF03710 Glutamate-ammonia ligase adenylyltransferase IT971_12570 PF00578 AhpC/TSA family IT971_12580 PF04305 Protein of unknown function (DUF455) IT971_12585 PF08240 Alcohol dehydrogenase GroES-like domain IT971_12585 PF00107 Zinc-binding dehydrogenase IT971_12590 PF02798 Glutathione S-transferase, N-terminal domain IT971_12595 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IT971_12595 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IT971_12600 PF12833 Helix-turn-helix domain IT971_12600 PF06029 AlkA N-terminal domain IT971_12600 PF02805 Metal binding domain of Ada IT971_12600 PF00730 HhH-GPD superfamily base excision DNA repair protein IT971_12625 PF17092 Penicillin-binding protein OB-like domain IT971_12625 PF00912 Transglycosylase IT971_12625 PF00905 Penicillin binding protein transpeptidase domain IT971_12630 PF01520 N-acetylmuramoyl-L-alanine amidase IT971_12635 PF00575 S1 RNA binding domain IT971_12635 PF12111 Polyribonucleotide phosphorylase C terminal IT971_12635 PF10150 Ribonuclease E/G family IT971_12640 PF00155 Aminotransferase class I and II IT971_12650 PF01435 Peptidase family M48 IT971_12665 PF02597 ThiS family IT971_12665 PF05690 Thiazole biosynthesis protein ThiG IT971_12670 PF01220 Dehydroquinase class II IT971_12675 PF00364 Biotin-requiring enzyme IT971_12680 PF02785 Biotin carboxylase C-terminal domain IT971_12680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IT971_12680 PF00289 Biotin carboxylase, N-terminal domain IT971_12685 PF01810 LysE type translocator IT971_12690 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IT971_12700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IT971_12700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IT971_12700 PF01842 ACT domain IT971_12710 PF17200 Single Cache domain 2 IT971_12710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_12710 PF00672 HAMP domain IT971_12725 PF00004 ATPase family associated with various cellular activities (AAA) IT971_12725 PF02861 Clp amino terminal domain, pathogenicity island component IT971_12725 PF10431 C-terminal, D2-small domain, of ClpB protein IT971_12725 PF07724 AAA domain (Cdc48 subfamily) IT971_12725 PF17871 AAA lid domain IT971_12730 PF02617 ATP-dependent Clp protease adaptor protein ClpS IT971_12745 PF00768 D-alanyl-D-alanine carboxypeptidase IT971_12745 PF07943 Penicillin-binding protein 5, C-terminal domain IT971_12750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IT971_12750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IT971_12750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IT971_12750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IT971_12755 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IT971_12755 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IT971_12755 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IT971_12760 PF00483 Nucleotidyl transferase IT971_12765 PF00684 DnaJ central domain IT971_12765 PF01556 DnaJ C terminal domain IT971_12765 PF00226 DnaJ domain IT971_12775 PF13614 AAA domain IT971_12785 PF01266 FAD dependent oxidoreductase IT971_12790 PF03537 Glycoside-hydrolase family GH114 IT971_12795 PF01323 DSBA-like thioredoxin domain IT971_12805 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IT971_12805 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IT971_12815 PF04972 BON domain IT971_12820 PF14850 DNA-binding domain of Proline dehydrogenase IT971_12820 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IT971_12820 PF00171 Aldehyde dehydrogenase family IT971_12820 PF01619 Proline dehydrogenase IT971_12825 PF01037 Lrp/AsnC ligand binding domain IT971_12830 PF01323 DSBA-like thioredoxin domain IT971_12835 PF01039 Carboxyl transferase domain IT971_12840 PF00378 Enoyl-CoA hydratase/isomerase IT971_12845 PF02785 Biotin carboxylase C-terminal domain IT971_12845 PF00289 Biotin carboxylase, N-terminal domain IT971_12845 PF00364 Biotin-requiring enzyme IT971_12845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IT971_12845 PF18140 Propionyl-coenzyme A carboxylase BT domain IT971_12850 PF00682 HMGL-like IT971_12860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_12860 PF00672 HAMP domain IT971_12880 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IT971_12880 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IT971_12895 PF03466 LysR substrate binding domain IT971_12895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_12905 PF03976 Polyphosphate kinase 2 (PPK2) IT971_12910 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IT971_12910 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IT971_12915 PF03572 Peptidase family S41 IT971_12915 PF13180 PDZ domain IT971_12920 PF02770 Acyl-CoA dehydrogenase, middle domain IT971_12920 PF12806 Acetyl-CoA dehydrogenase C-terminal like IT971_12920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IT971_12920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IT971_12925 PF03739 Lipopolysaccharide export system permease LptF/LptG IT971_12935 PF04453 LPS transport system D IT971_12935 PF03968 OstA-like protein IT971_12940 PF00639 PPIC-type PPIASE domain IT971_12940 PF09312 SurA N-terminal domain IT971_12945 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IT971_12950 PF00398 Ribosomal RNA adenine dimethylase IT971_12955 PF00625 Guanylate kinase IT971_12960 PF08340 Domain of unknown function (DUF1732) IT971_12960 PF03755 YicC-like family, N-terminal region IT971_12965 PF00106 short chain dehydrogenase IT971_12970 PF02618 YceG-like family IT971_12975 PF02801 Beta-ketoacyl synthase, C-terminal domain IT971_12975 PF00109 Beta-ketoacyl synthase, N-terminal domain IT971_12980 PF00550 Phosphopantetheine attachment site IT971_12995 PF01250 Ribosomal protein S6 IT971_13000 PF01084 Ribosomal protein S18 IT971_13010 PF03948 Ribosomal protein L9, C-terminal domain IT971_13010 PF01281 Ribosomal protein L9, N-terminal domain IT971_13015 PF00772 DnaB-like helicase N terminal domain IT971_13015 PF03796 DnaB-like helicase C terminal domain IT971_13020 PF01168 Alanine racemase, N-terminal domain IT971_13020 PF00842 Alanine racemase, C-terminal domain IT971_13025 PF02405 Permease MlaE IT971_13030 PF00005 ABC transporter IT971_13035 PF06745 KaiC IT971_13035 PF18073 Rubredoxin metal binding domain IT971_13045 PF13537 Glutamine amidotransferase domain IT971_13045 PF00156 Phosphoribosyl transferase domain IT971_13050 PF00106 short chain dehydrogenase IT971_13060 PF03466 LysR substrate binding domain IT971_13060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_13065 PF00248 Aldo/keto reductase family IT971_13070 PF08534 Redoxin IT971_13075 PF01926 50S ribosome-binding GTPase IT971_13075 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IT971_13080 PF13360 PQQ-like domain IT971_13105 PF00268 Ribonucleotide reductase, small chain IT971_13110 PF03477 ATP cone domain IT971_13110 PF00317 Ribonucleotide reductase, all-alpha domain IT971_13110 PF02867 Ribonucleotide reductase, barrel domain IT971_13115 PF01011 PQQ enzyme repeat IT971_13120 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IT971_13125 PF00291 Pyridoxal-phosphate dependent enzyme IT971_13130 PF00011 Hsp20/alpha crystallin family IT971_13135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IT971_13140 PF00118 TCP-1/cpn60 chaperonin family IT971_13145 PF00166 Chaperonin 10 Kd subunit IT971_13150 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IT971_13155 PF00483 Nucleotidyl transferase IT971_13160 PF04321 RmlD substrate binding domain IT971_13165 PF16363 GDP-mannose 4,6 dehydratase IT971_13170 PF01380 SIS domain IT971_13175 PF00132 Bacterial transferase hexapeptide (six repeats) IT971_13175 PF12804 MobA-like NTP transferase domain IT971_13180 PF13419 Haloacid dehalogenase-like hydrolase IT971_13190 PF00920 Dehydratase family IT971_13195 PF02653 Branched-chain amino acid transport system / permease component IT971_13200 PF00005 ABC transporter IT971_13205 PF13407 Periplasmic binding protein domain IT971_13210 PF03466 LysR substrate binding domain IT971_13210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_13220 PF01121 Dephospho-CoA kinase IT971_13230 PF01641 SelR domain IT971_13245 PF12706 Beta-lactamase superfamily domain IT971_13250 PF00005 ABC transporter IT971_13250 PF08402 TOBE domain IT971_13255 PF00528 Binding-protein-dependent transport system inner membrane component IT971_13260 PF13416 Bacterial extracellular solute-binding protein IT971_13265 PF08220 DeoR-like helix-turn-helix domain IT971_13265 PF00455 DeoR C terminal sensor domain IT971_13335 PF00211 Adenylate and Guanylate cyclase catalytic domain IT971_13340 PF00672 HAMP domain IT971_13340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_13340 PF00512 His Kinase A (phospho-acceptor) domain IT971_13345 PF00072 Response regulator receiver domain IT971_13345 PF00486 Transcriptional regulatory protein, C terminal IT971_13360 PF02690 Na+/Pi-cotransporter IT971_13370 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IT971_13370 PF01266 FAD dependent oxidoreductase IT971_13375 PF00733 Asparagine synthase IT971_13375 PF13537 Glutamine amidotransferase domain IT971_13380 PF01037 Lrp/AsnC ligand binding domain IT971_13385 PF01590 GAF domain IT971_13385 PF00158 Sigma-54 interaction domain IT971_13385 PF02954 Bacterial regulatory protein, Fis family IT971_13390 PF00171 Aldehyde dehydrogenase family IT971_13400 PF03601 Conserved hypothetical protein 698 IT971_13405 PF03466 LysR substrate binding domain IT971_13405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_13410 PF01654 Cytochrome bd terminal oxidase subunit I IT971_13415 PF02322 Cytochrome bd terminal oxidase subunit II IT971_13430 PF00155 Aminotransferase class I and II IT971_13440 PF04958 Arginine N-succinyltransferase beta subunit IT971_13445 PF00171 Aldehyde dehydrogenase family IT971_13450 PF04996 Succinylarginine dihydrolase IT971_13460 PF00202 Aminotransferase class-III IT971_13465 PF01037 Lrp/AsnC ligand binding domain IT971_13470 PF01507 Phosphoadenosine phosphosulfate reductase family IT971_13475 PF00009 Elongation factor Tu GTP binding domain IT971_13495 PF01336 OB-fold nucleic acid binding domain IT971_13495 PF07733 Bacterial DNA polymerase III alpha NTPase domain IT971_13495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IT971_13495 PF14579 Helix-hairpin-helix motif IT971_13495 PF02811 PHP domain IT971_13505 PF00528 Binding-protein-dependent transport system inner membrane component IT971_13505 PF12911 N-terminal TM domain of oligopeptide transport permease C IT971_13510 PF00528 Binding-protein-dependent transport system inner membrane component IT971_13515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IT971_13520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IT971_13520 PF00005 ABC transporter IT971_13530 PF00005 ABC transporter IT971_13535 PF03861 ANTAR domain IT971_13535 PF00072 Response regulator receiver domain IT971_13540 PF07690 Major Facilitator Superfamily IT971_13545 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IT971_13545 PF18267 Rubredoxin NAD+ reductase C-terminal domain IT971_13545 PF07992 Pyridine nucleotide-disulphide oxidoreductase IT971_13545 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IT971_13545 PF04324 BFD-like [2Fe-2S] binding domain IT971_13550 PF00355 Rieske [2Fe-2S] domain IT971_13555 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IT971_13555 PF00384 Molybdopterin oxidoreductase IT971_13555 PF01568 Molydopterin dinucleotide binding domain IT971_13555 PF04324 BFD-like [2Fe-2S] binding domain IT971_13560 PF14824 Sirohaem biosynthesis protein central IT971_13560 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IT971_13560 PF10414 Sirohaem synthase dimerisation region IT971_13565 PF00155 Aminotransferase class I and II IT971_13570 PF01066 CDP-alcohol phosphatidyltransferase IT971_13585 PF01541 GIY-YIG catalytic domain IT971_13595 PF01081 KDPG and KHG aldolase IT971_13600 PF05035 2-keto-3-deoxy-galactonokinase IT971_13610 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IT971_13610 PF00355 Rieske [2Fe-2S] domain IT971_13615 PF00111 2Fe-2S iron-sulfur cluster binding domain IT971_13615 PF00175 Oxidoreductase NAD-binding domain IT971_13615 PF00970 Oxidoreductase FAD-binding domain IT971_13620 PF02028 BCCT, betaine/carnitine/choline family transporter IT971_13625 PF12833 Helix-turn-helix domain IT971_13630 PF01012 Electron transfer flavoprotein domain IT971_13635 PF01012 Electron transfer flavoprotein domain IT971_13635 PF00766 Electron transfer flavoprotein FAD-binding domain IT971_13640 PF01842 ACT domain IT971_13640 PF00551 Formyl transferase IT971_13645 PF01571 Aminomethyltransferase folate-binding domain IT971_13645 PF01266 FAD dependent oxidoreductase IT971_13645 PF16350 FAD dependent oxidoreductase central domain IT971_13645 PF08669 Glycine cleavage T-protein C-terminal barrel domain IT971_13650 PF08240 Alcohol dehydrogenase GroES-like domain IT971_13650 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IT971_13690 PF05544 Proline racemase IT971_13695 PF00392 Bacterial regulatory proteins, gntR family IT971_13695 PF07729 FCD domain IT971_13700 PF05544 Proline racemase IT971_13705 PF01266 FAD dependent oxidoreductase IT971_13710 PF00701 Dihydrodipicolinate synthetase family IT971_13715 PF00534 Glycosyl transferases group 1 IT971_13720 PF00107 Zinc-binding dehydrogenase IT971_13720 PF08240 Alcohol dehydrogenase GroES-like domain IT971_13730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IT971_13730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IT971_13735 PF02350 UDP-N-acetylglucosamine 2-epimerase IT971_13745 PF00171 Aldehyde dehydrogenase family IT971_13750 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IT971_13750 PF01266 FAD dependent oxidoreductase IT971_13755 PF00005 ABC transporter IT971_13755 PF17912 MalK OB fold domain IT971_13760 PF00005 ABC transporter IT971_13760 PF17912 MalK OB fold domain IT971_13770 PF00528 Binding-protein-dependent transport system inner membrane component IT971_13785 PF08269 Cache domain IT971_13785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_13805 PF12804 MobA-like NTP transferase domain IT971_13810 PF00893 Small Multidrug Resistance protein IT971_13815 PF01979 Amidohydrolase family IT971_13825 PF00528 Binding-protein-dependent transport system inner membrane component IT971_13830 PF00528 Binding-protein-dependent transport system inner membrane component IT971_13845 PF00202 Aminotransferase class-III IT971_13850 PF08362 YcdC-like protein, C-terminal region IT971_13850 PF00440 Bacterial regulatory proteins, tetR family IT971_13860 PF01546 Peptidase family M20/M25/M40 IT971_13860 PF07687 Peptidase dimerisation domain IT971_13865 PF01180 Dihydroorotate dehydrogenase IT971_13870 PF07992 Pyridine nucleotide-disulphide oxidoreductase IT971_13870 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IT971_13885 PF00005 ABC transporter IT971_13885 PF08402 TOBE domain IT971_13890 PF00528 Binding-protein-dependent transport system inner membrane component IT971_13900 PF00455 DeoR C terminal sensor domain IT971_13900 PF08220 DeoR-like helix-turn-helix domain IT971_13905 PF01136 Peptidase family U32 IT971_13905 PF16325 Peptidase family U32 C-terminal domain IT971_13920 PF03600 Citrate transporter IT971_13925 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IT971_13925 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IT971_13940 PF08450 SMP-30/Gluconolactonase/LRE-like region IT971_13945 PF00005 ABC transporter IT971_13960 PF01032 FecCD transport family IT971_13985 PF01370 NAD dependent epimerase/dehydratase family IT971_13990 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_14000 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_14005 PF00701 Dihydrodipicolinate synthetase family IT971_14015 PF08450 SMP-30/Gluconolactonase/LRE-like region IT971_14020 PF07729 FCD domain IT971_14020 PF00392 Bacterial regulatory proteins, gntR family IT971_14025 PF01263 Aldose 1-epimerase IT971_14030 PF00392 Bacterial regulatory proteins, gntR family IT971_14030 PF07729 FCD domain IT971_14035 PF13419 Haloacid dehalogenase-like hydrolase IT971_14040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IT971_14040 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IT971_14045 PF01557 Fumarylacetoacetate (FAA) hydrolase family IT971_14050 PF01738 Dienelactone hydrolase family IT971_14055 PF00920 Dehydratase family IT971_14065 PF13407 Periplasmic binding protein domain IT971_14070 PF02653 Branched-chain amino acid transport system / permease component IT971_14075 PF00005 ABC transporter IT971_14085 PF00480 ROK family IT971_14090 PF03737 Aldolase/RraA IT971_14095 PF00171 Aldehyde dehydrogenase family IT971_14100 PF00701 Dihydrodipicolinate synthetase family IT971_14105 PF00920 Dehydratase family IT971_14125 PF00356 Bacterial regulatory proteins, lacI family IT971_14130 PF02634 FdhD/NarQ family IT971_14140 PF00037 4Fe-4S binding domain IT971_14140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IT971_14140 PF00384 Molybdopterin oxidoreductase IT971_14140 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IT971_14140 PF01568 Molydopterin dinucleotide binding domain IT971_14145 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region IT971_14145 PF00037 4Fe-4S binding domain IT971_14145 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IT971_14155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_14155 PF03466 LysR substrate binding domain IT971_14160 PF07690 Major Facilitator Superfamily IT971_14165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_14165 PF00512 His Kinase A (phospho-acceptor) domain IT971_14170 PF02954 Bacterial regulatory protein, Fis family IT971_14170 PF00072 Response regulator receiver domain IT971_14170 PF00158 Sigma-54 interaction domain IT971_14175 PF07715 TonB-dependent Receptor Plug Domain IT971_14185 PF06472 ABC transporter transmembrane region 2 IT971_14185 PF00005 ABC transporter IT971_14190 PF00171 Aldehyde dehydrogenase family IT971_14200 PF00550 Phosphopantetheine attachment site IT971_14200 PF02801 Beta-ketoacyl synthase, C-terminal domain IT971_14200 PF00109 Beta-ketoacyl synthase, N-terminal domain IT971_14200 PF00698 Acyl transferase domain IT971_14200 PF00668 Condensation domain IT971_14200 PF16197 Ketoacyl-synthetase C-terminal extension IT971_14205 PF13193 AMP-binding enzyme C-terminal domain IT971_14205 PF00668 Condensation domain IT971_14205 PF00550 Phosphopantetheine attachment site IT971_14205 PF00975 Thioesterase domain IT971_14205 PF00501 AMP-binding enzyme IT971_14210 PF00501 AMP-binding enzyme IT971_14210 PF13193 AMP-binding enzyme C-terminal domain IT971_14210 PF00668 Condensation domain IT971_14210 PF00550 Phosphopantetheine attachment site IT971_14210 PF00975 Thioesterase domain IT971_14220 PF05128 Domain of unknown function (DUF697) IT971_14235 PF05128 Domain of unknown function (DUF697) IT971_14260 PF09084 NMT1/THI5 like IT971_14265 PF00291 Pyridoxal-phosphate dependent enzyme IT971_14270 PF00005 ABC transporter IT971_14270 PF00664 ABC transporter transmembrane region IT971_14275 PF00005 ABC transporter IT971_14275 PF00664 ABC transporter transmembrane region IT971_14280 PF00975 Thioesterase domain IT971_14305 PF00550 Phosphopantetheine attachment site IT971_14310 PF00550 Phosphopantetheine attachment site IT971_14320 PF07977 FabA-like domain IT971_14330 PF00221 Aromatic amino acid lyase IT971_14350 PF04820 Tryptophan halogenase IT971_14360 PF02801 Beta-ketoacyl synthase, C-terminal domain IT971_14360 PF00109 Beta-ketoacyl synthase, N-terminal domain IT971_14375 PF00109 Beta-ketoacyl synthase, N-terminal domain IT971_14375 PF02801 Beta-ketoacyl synthase, C-terminal domain IT971_14390 PF00005 ABC transporter IT971_14395 PF00005 ABC transporter IT971_14395 PF12399 Branched-chain amino acid ATP-binding cassette transporter IT971_14405 PF02653 Branched-chain amino acid transport system / permease component IT971_14415 PF03301 Tryptophan 2,3-dioxygenase IT971_14420 PF00266 Aminotransferase class-V IT971_14425 PF13193 AMP-binding enzyme C-terminal domain IT971_14425 PF00501 AMP-binding enzyme IT971_14430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IT971_14430 PF02770 Acyl-CoA dehydrogenase, middle domain IT971_14430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IT971_14435 PF00378 Enoyl-CoA hydratase/isomerase IT971_14445 PF00106 short chain dehydrogenase IT971_14450 PF01494 FAD binding domain IT971_14465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IT971_14465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IT971_14465 PF00378 Enoyl-CoA hydratase/isomerase IT971_14470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IT971_14470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IT971_14475 PF04962 KduI/IolB family IT971_14480 PF01261 Xylose isomerase-like TIM barrel IT971_14485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IT971_14485 PF00205 Thiamine pyrophosphate enzyme, central domain IT971_14485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IT971_14490 PF00294 pfkB family carbohydrate kinase IT971_14495 PF00005 ABC transporter IT971_14500 PF02653 Branched-chain amino acid transport system / permease component IT971_14515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IT971_14515 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IT971_14525 PF04962 KduI/IolB family IT971_14530 PF00356 Bacterial regulatory proteins, lacI family IT971_14540 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_14550 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_14555 PF07470 Glycosyl Hydrolase Family 88 IT971_14560 PF00180 Isocitrate/isopropylmalate dehydrogenase IT971_14565 PF04303 PrpF protein IT971_14580 PF00486 Transcriptional regulatory protein, C terminal IT971_14580 PF00072 Response regulator receiver domain IT971_14585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_14585 PF00512 His Kinase A (phospho-acceptor) domain IT971_14595 PF00890 FAD binding domain IT971_14595 PF03358 NADPH-dependent FMN reductase IT971_14595 PF04205 FMN-binding domain IT971_14600 PF07729 FCD domain IT971_14600 PF00392 Bacterial regulatory proteins, gntR family IT971_14605 PF00005 ABC transporter IT971_14605 PF00664 ABC transporter transmembrane region IT971_14610 PF00672 HAMP domain IT971_14610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_14610 PF00512 His Kinase A (phospho-acceptor) domain IT971_14615 PF00486 Transcriptional regulatory protein, C terminal IT971_14615 PF00072 Response regulator receiver domain IT971_14620 PF02321 Outer membrane efflux protein IT971_14625 PF02687 FtsX-like permease family IT971_14625 PF12704 MacB-like periplasmic core domain IT971_14625 PF00005 ABC transporter IT971_14630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IT971_14675 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_14685 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_14690 PF01979 Amidohydrolase family IT971_14695 PF00440 Bacterial regulatory proteins, tetR family IT971_14700 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_14710 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_14715 PF00440 Bacterial regulatory proteins, tetR family IT971_14730 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IT971_14730 PF13378 Enolase C-terminal domain-like IT971_14735 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IT971_14740 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_14740 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IT971_14750 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_14755 PF07729 FCD domain IT971_14755 PF00392 Bacterial regulatory proteins, gntR family IT971_14760 PF00106 short chain dehydrogenase IT971_14770 PF04198 Putative sugar-binding domain IT971_14780 PF00528 Binding-protein-dependent transport system inner membrane component IT971_14785 PF00528 Binding-protein-dependent transport system inner membrane component IT971_14795 PF08240 Alcohol dehydrogenase GroES-like domain IT971_14795 PF00107 Zinc-binding dehydrogenase IT971_14800 PF17912 MalK OB fold domain IT971_14800 PF03459 TOBE domain IT971_14800 PF00005 ABC transporter IT971_14805 PF13419 Haloacid dehalogenase-like hydrolase IT971_14810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IT971_14810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IT971_14815 PF16527 Two-component sensor protein CpxA, periplasmic domain IT971_14815 PF00672 HAMP domain IT971_14815 PF00512 His Kinase A (phospho-acceptor) domain IT971_14815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_14820 PF00072 Response regulator receiver domain IT971_14820 PF00486 Transcriptional regulatory protein, C terminal IT971_14825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IT971_14830 PF00005 ABC transporter IT971_14830 PF02687 FtsX-like permease family IT971_14830 PF12704 MacB-like periplasmic core domain IT971_14835 PF02321 Outer membrane efflux protein IT971_14860 PF07559 Flagellar basal body protein FlaE IT971_14860 PF00460 Flagella basal body rod protein IT971_14860 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IT971_14880 PF04542 Sigma-70 region 2 IT971_14880 PF08281 Sigma-70, region 4 IT971_14890 PF02465 Flagellar hook-associated protein 2 N-terminus IT971_14890 PF07195 Flagellar hook-associated protein 2 C-terminus IT971_14890 PF07196 Flagellin hook IN motif IT971_14895 PF00700 Bacterial flagellin C-terminal helical region IT971_14895 PF07196 Flagellin hook IN motif IT971_14895 PF00669 Bacterial flagellin N-terminal helical region IT971_14915 PF00593 TonB dependent receptor IT971_14915 PF07715 TonB-dependent Receptor Plug Domain IT971_14920 PF00005 ABC transporter IT971_14925 PF01497 Periplasmic binding protein IT971_14930 PF01032 FecCD transport family IT971_14935 PF11575 FhuF 2Fe-2S C-terminal domain IT971_14935 PF06276 Ferric iron reductase FhuF-like transporter IT971_14945 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) IT971_14950 PF00501 AMP-binding enzyme IT971_14950 PF13193 AMP-binding enzyme C-terminal domain IT971_14950 PF00668 Condensation domain IT971_14950 PF00550 Phosphopantetheine attachment site IT971_14960 PF01554 MatE IT971_14965 PF01053 Cys/Met metabolism PLP-dependent enzyme IT971_14995 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IT971_15070 PF02534 Type IV secretory system Conjugative DNA transfer IT971_15080 PF18818 Metallopeptidase superfamily domain IT971_15080 PF13362 Toprim domain IT971_15080 PF08401 Domain of unknown function (DUF1738) IT971_15090 PF18821 Large polyvalent protein-associated domain 7 IT971_15090 PF03432 Relaxase/Mobilisation nuclease domain IT971_15095 PF01381 Helix-turn-helix IT971_15150 PF00717 Peptidase S24-like IT971_15160 PF02899 Phage integrase, N-terminal SAM-like domain IT971_15160 PF00589 Phage integrase family IT971_15185 PF00403 Heavy-metal-associated domain IT971_15185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IT971_15185 PF07992 Pyridine nucleotide-disulphide oxidoreductase IT971_15195 PF07992 Pyridine nucleotide-disulphide oxidoreductase IT971_15195 PF00403 Heavy-metal-associated domain IT971_15195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IT971_15200 PF02411 MerT mercuric transport protein IT971_15205 PF13411 MerR HTH family regulatory protein IT971_15210 PF13411 MerR HTH family regulatory protein IT971_15225 PF00403 Heavy-metal-associated domain IT971_15230 PF02683 Cytochrome C biogenesis protein transmembrane region IT971_15245 PF02630 SCO1/SenC IT971_15260 PF08534 Redoxin IT971_15265 PF08534 Redoxin IT971_15305 PF07731 Multicopper oxidase IT971_15305 PF00394 Multicopper oxidase IT971_15305 PF07732 Multicopper oxidase IT971_15310 PF05275 Copper resistance protein B precursor (CopB) IT971_15335 PF04945 YHS domain IT971_15340 PF13438 Domain of unknown function (DUF4113) IT971_15340 PF00817 impB/mucB/samB family IT971_15340 PF11799 impB/mucB/samB family C-terminal domain IT971_15350 PF06470 SMC proteins Flexible Hinge Domain IT971_15350 PF02463 RecF/RecN/SMC N terminal domain IT971_15385 PF07015 VirC1 protein IT971_15445 PF01464 Transglycosylase SLT domain IT971_15445 PF10145 Phage-related minor tail protein IT971_15445 PF01551 Peptidase family M23 IT971_15450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_15450 PF03466 LysR substrate binding domain IT971_15455 PF00497 Bacterial extracellular solute-binding proteins, family 3 IT971_15460 PF00528 Binding-protein-dependent transport system inner membrane component IT971_15465 PF00528 Binding-protein-dependent transport system inner membrane component IT971_15470 PF00005 ABC transporter IT971_15480 PF00005 ABC transporter IT971_15480 PF00664 ABC transporter transmembrane region IT971_15485 PF01491 Frataxin-like domain IT971_15490 PF01197 Ribosomal protein L31 IT971_15495 PF00211 Adenylate and Guanylate cyclase catalytic domain IT971_15510 PF08659 KR domain IT971_15510 PF00550 Phosphopantetheine attachment site IT971_15510 PF08240 Alcohol dehydrogenase GroES-like domain IT971_15510 PF00107 Zinc-binding dehydrogenase IT971_15510 PF16197 Ketoacyl-synthetase C-terminal extension IT971_15510 PF14765 Polyketide synthase dehydratase IT971_15510 PF00109 Beta-ketoacyl synthase, N-terminal domain IT971_15510 PF02801 Beta-ketoacyl synthase, C-terminal domain IT971_15510 PF00698 Acyl transferase domain IT971_15520 PF08220 DeoR-like helix-turn-helix domain IT971_15520 PF00455 DeoR C terminal sensor domain IT971_15525 PF03466 LysR substrate binding domain IT971_15525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_15550 PF16177 Acetyl-coenzyme A synthetase N-terminus IT971_15550 PF13193 AMP-binding enzyme C-terminal domain IT971_15550 PF00501 AMP-binding enzyme IT971_15560 PF02441 Flavoprotein IT971_15570 PF00365 Phosphofructokinase IT971_15585 PF00731 AIR carboxylase IT971_15590 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IT971_15590 PF02222 ATP-grasp domain IT971_15605 PF01327 Polypeptide deformylase IT971_15610 PF00529 HlyD membrane-fusion protein of T1SS IT971_15610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IT971_15620 PF01165 Ribosomal protein S21 IT971_15625 PF03553 Na+/H+ antiporter family IT971_15625 PF13726 Na+-H+ antiporter family IT971_15635 PF02233 NAD(P) transhydrogenase beta subunit IT971_15640 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IT971_15645 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IT971_15645 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IT971_15650 PF03109 ABC1 family IT971_15660 PF00501 AMP-binding enzyme IT971_15675 PF10431 C-terminal, D2-small domain, of ClpB protein IT971_15675 PF02861 Clp amino terminal domain, pathogenicity island component IT971_15675 PF17871 AAA lid domain IT971_15675 PF07724 AAA domain (Cdc48 subfamily) IT971_15675 PF00004 ATPase family associated with various cellular activities (AAA) IT971_15695 PF05175 Methyltransferase small domain IT971_15695 PF17827 PrmC N-terminal domain IT971_15700 PF03462 PCRF domain IT971_15700 PF00472 RF-1 domain IT971_15705 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IT971_15705 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IT971_15705 PF01488 Shikimate / quinate 5-dehydrogenase IT971_15710 PF03129 Anticodon binding domain IT971_15710 PF13393 Histidyl-tRNA synthetase IT971_15715 PF04551 GcpE protein IT971_15725 PF00391 PEP-utilising enzyme, mobile domain IT971_15725 PF02896 PEP-utilising enzyme, TIM barrel domain IT971_15725 PF05524 PEP-utilising enzyme, N-terminal IT971_15725 PF01590 GAF domain IT971_15730 PF03060 Nitronate monooxygenase IT971_15735 PF13840 ACT domain IT971_15735 PF00696 Amino acid kinase family IT971_15735 PF01842 ACT domain IT971_15750 PF03848 Tellurite resistance protein TehB IT971_15760 PF00245 Alkaline phosphatase IT971_15770 PF02687 FtsX-like permease family IT971_15770 PF12704 MacB-like periplasmic core domain IT971_15770 PF00005 ABC transporter IT971_15790 PF00795 Carbon-nitrogen hydrolase IT971_15795 PF00392 Bacterial regulatory proteins, gntR family IT971_15795 PF07729 FCD domain IT971_15810 PF00462 Glutaredoxin IT971_15815 PF00156 Phosphoribosyl transferase domain IT971_15820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_15820 PF03466 LysR substrate binding domain IT971_15825 PF02798 Glutathione S-transferase, N-terminal domain IT971_15830 PF00175 Oxidoreductase NAD-binding domain IT971_15830 PF00042 Globin IT971_15830 PF00970 Oxidoreductase FAD-binding domain IT971_15835 PF08241 Methyltransferase domain IT971_15840 PF03749 Sugar fermentation stimulation protein RE domain IT971_15840 PF17746 SfsA N-terminal OB domain IT971_15845 PF00557 Metallopeptidase family M24 IT971_15850 PF04002 RadC-like JAB domain IT971_15855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IT971_15865 PF12833 Helix-turn-helix domain IT971_15865 PF12852 Cupin IT971_15870 PF12833 Helix-turn-helix domain IT971_15870 PF12852 Cupin IT971_15885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IT971_15890 PF00528 Binding-protein-dependent transport system inner membrane component IT971_15895 PF12911 N-terminal TM domain of oligopeptide transport permease C IT971_15895 PF00528 Binding-protein-dependent transport system inner membrane component IT971_15900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IT971_15900 PF00005 ABC transporter IT971_15905 PF00005 ABC transporter IT971_15905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IT971_15910 PF13180 PDZ domain IT971_15930 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA IT971_15935 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IT971_15935 PF12833 Helix-turn-helix domain IT971_15935 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IT971_15935 PF02805 Metal binding domain of Ada IT971_15950 PF00206 Lyase IT971_15950 PF10397 Adenylosuccinate lyase C-terminus IT971_15960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_15960 PF03466 LysR substrate binding domain IT971_15970 PF06418 CTP synthase N-terminus IT971_15970 PF00117 Glutamine amidotransferase class-I IT971_15975 PF00072 Response regulator receiver domain IT971_15975 PF00196 Bacterial regulatory proteins, luxR family IT971_15990 PF01259 SAICAR synthetase IT971_15995 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase IT971_16005 PF00586 AIR synthase related protein, N-terminal domain IT971_16005 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IT971_16005 PF02769 AIR synthase related protein, C-terminal domain IT971_16025 PF10609 NUBPL iron-transfer P-loop NTPase IT971_16030 PF01145 SPFH domain / Band 7 family IT971_16045 PF13180 PDZ domain IT971_16065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IT971_16065 PF00205 Thiamine pyrophosphate enzyme, central domain IT971_16065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IT971_16070 PF10369 Small subunit of acetolactate synthase IT971_16075 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IT971_16075 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IT971_16080 PF04227 Indigoidine synthase A like protein IT971_16090 PF00155 Aminotransferase class I and II IT971_16090 PF00392 Bacterial regulatory proteins, gntR family IT971_16095 PF03441 FAD binding domain of DNA photolyase IT971_16095 PF00875 DNA photolyase IT971_16115 PF03884 DNA gyrase inhibitor YacG IT971_16120 PF00575 S1 RNA binding domain IT971_16120 PF10150 Ribonuclease E/G family IT971_16120 PF12111 Polyribonucleotide phosphorylase C terminal IT971_16125 PF02545 Maf-like protein IT971_16130 PF01176 Translation initiation factor 1A / IF-1 IT971_16140 PF01451 Low molecular weight phosphotyrosine protein phosphatase IT971_16145 PF06793 Uncharacterised protein family (UPF0262) IT971_16150 PF00815 Histidinol dehydrogenase IT971_16155 PF01634 ATP phosphoribosyltransferase IT971_16160 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IT971_16165 PF00692 dUTPase IT971_16195 PF01370 NAD dependent epimerase/dehydratase family IT971_16205 PF00072 Response regulator receiver domain IT971_16205 PF00196 Bacterial regulatory proteins, luxR family IT971_16210 PF00072 Response regulator receiver domain IT971_16210 PF13188 PAS domain IT971_16210 PF08448 PAS fold IT971_16210 PF00512 His Kinase A (phospho-acceptor) domain IT971_16210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_16215 PF00107 Zinc-binding dehydrogenase IT971_16220 PF06803 Protein of unknown function (DUF1232) IT971_16230 PF00535 Glycosyl transferase family 2 IT971_16245 PF01571 Aminomethyltransferase folate-binding domain IT971_16250 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IT971_16250 PF00391 PEP-utilising enzyme, mobile domain IT971_16250 PF02896 PEP-utilising enzyme, TIM barrel domain IT971_16255 PF02092 Glycyl-tRNA synthetase beta subunit IT971_16255 PF05746 DALR anticodon binding domain IT971_16260 PF02091 Glycyl-tRNA synthetase alpha subunit IT971_16275 PF17827 PrmC N-terminal domain IT971_16275 PF13847 Methyltransferase domain IT971_16285 PF00348 Polyprenyl synthetase IT971_16300 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_16310 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_16320 PF00034 Cytochrome c IT971_16330 PF03781 Sulfatase-modifying factor enzyme 1 IT971_16340 PF00582 Universal stress protein family IT971_16350 PF16868 NMT1-like family IT971_16355 PF05853 beta-keto acid cleavage enzyme IT971_16360 PF00202 Aminotransferase class-III IT971_16370 PF00672 HAMP domain IT971_16370 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IT971_16370 PF00072 Response regulator receiver domain IT971_16370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_16370 PF01627 Hpt domain IT971_16370 PF00512 His Kinase A (phospho-acceptor) domain IT971_16375 PF13537 Glutamine amidotransferase domain IT971_16375 PF00733 Asparagine synthase IT971_16385 PF00149 Calcineurin-like phosphoesterase IT971_16390 PF08331 Domain of unknown function (DUF1730) IT971_16395 PF07715 TonB-dependent Receptor Plug Domain IT971_16395 PF00593 TonB dependent receptor IT971_16410 PF14489 QueF-like protein IT971_16415 PF01702 Queuine tRNA-ribosyltransferase IT971_16420 PF02547 Queuosine biosynthesis protein IT971_16425 PF02592 Putative vitamin uptake transporter IT971_16430 PF01384 Phosphate transporter family IT971_16490 PF03466 LysR substrate binding domain IT971_16490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_16500 PF02913 FAD linked oxidases, C-terminal domain IT971_16500 PF01565 FAD binding domain IT971_16505 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IT971_16510 PF03466 LysR substrate binding domain IT971_16510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_16520 PF02653 Branched-chain amino acid transport system / permease component IT971_16525 PF00990 Diguanylate cyclase, GGDEF domain IT971_16545 PF00589 Phage integrase family IT971_16545 PF02899 Phage integrase, N-terminal SAM-like domain IT971_16550 PF01645 Conserved region in glutamate synthase IT971_16555 PF13180 PDZ domain IT971_16560 PF05378 Hydantoinase/oxoprolinase N-terminal region IT971_16560 PF01968 Hydantoinase/oxoprolinase IT971_16565 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_16580 PF00106 short chain dehydrogenase IT971_16590 PF00672 HAMP domain IT971_16590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_16595 PF00226 DnaJ domain IT971_16595 PF05099 Tellurite resistance protein TerB IT971_16600 PF00005 ABC transporter IT971_16600 PF16326 ABC transporter C-terminal domain IT971_16615 PF01510 N-acetylmuramoyl-L-alanine amidase IT971_16635 PF00857 Isochorismatase family IT971_16640 PF01965 DJ-1/PfpI family IT971_16640 PF12833 Helix-turn-helix domain IT971_16650 PF01544 CorA-like Mg2+ transporter protein IT971_16660 PF02381 MraZ protein, putative antitoxin-like IT971_16665 PF01795 MraW methylase family IT971_16675 PF03717 Penicillin-binding Protein dimerisation domain IT971_16675 PF00905 Penicillin binding protein transpeptidase domain IT971_16680 PF08245 Mur ligase middle domain IT971_16680 PF02875 Mur ligase family, glutamate ligase domain IT971_16680 PF01225 Mur ligase family, catalytic domain IT971_16685 PF08245 Mur ligase middle domain IT971_16685 PF02875 Mur ligase family, glutamate ligase domain IT971_16685 PF01225 Mur ligase family, catalytic domain IT971_16690 PF00953 Glycosyl transferase family 4 IT971_16695 PF08245 Mur ligase middle domain IT971_16700 PF01098 Cell cycle protein IT971_16710 PF02661 Fic/DOC family IT971_16710 PF17841 BID domain of Bartonella effector protein (Bep) IT971_16720 PF00107 Zinc-binding dehydrogenase IT971_16720 PF08240 Alcohol dehydrogenase GroES-like domain IT971_16740 PF00665 Integrase core domain IT971_16740 PF13936 Helix-turn-helix domain IT971_16745 PF04101 Glycosyltransferase family 28 C-terminal domain IT971_16745 PF03033 Glycosyltransferase family 28 N-terminal domain IT971_16750 PF02875 Mur ligase family, glutamate ligase domain IT971_16750 PF01225 Mur ligase family, catalytic domain IT971_16750 PF08245 Mur ligase middle domain IT971_16755 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IT971_16755 PF01565 FAD binding domain IT971_16760 PF07478 D-ala D-ala ligase C-terminus IT971_16760 PF01820 D-ala D-ala ligase N-terminus IT971_16765 PF03799 Cell division protein FtsQ IT971_16765 PF08478 POTRA domain, FtsQ-type IT971_16770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IT971_16770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IT971_16790 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_16795 PF13378 Enolase C-terminal domain-like IT971_16795 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IT971_16805 PF00107 Zinc-binding dehydrogenase IT971_16805 PF08240 Alcohol dehydrogenase GroES-like domain IT971_16815 PF00005 ABC transporter IT971_16815 PF17912 MalK OB fold domain IT971_16820 PF00528 Binding-protein-dependent transport system inner membrane component IT971_16825 PF00528 Binding-protein-dependent transport system inner membrane component IT971_16830 PF01547 Bacterial extracellular solute-binding protein IT971_16845 PF00005 ABC transporter IT971_16845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IT971_16850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IT971_16850 PF00005 ABC transporter IT971_16855 PF12911 N-terminal TM domain of oligopeptide transport permease C IT971_16855 PF00528 Binding-protein-dependent transport system inner membrane component IT971_16860 PF00528 Binding-protein-dependent transport system inner membrane component IT971_16865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IT971_16870 PF09339 IclR helix-turn-helix domain IT971_16870 PF01614 Bacterial transcriptional regulator IT971_16875 PF02491 SHS2 domain inserted in FTSA IT971_16880 PF12327 FtsZ family, C-terminal domain IT971_16880 PF00091 Tubulin/FtsZ family, GTPase domain IT971_16885 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IT971_16890 PF13525 Outer membrane lipoprotein IT971_16895 PF02463 RecF/RecN/SMC N terminal domain IT971_16900 PF12826 Helix-hairpin-helix motif IT971_16900 PF00533 BRCA1 C Terminus (BRCT) domain IT971_16900 PF01653 NAD-dependent DNA ligase adenylation domain IT971_16900 PF03120 NAD-dependent DNA ligase OB-fold domain IT971_16900 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IT971_16920 PF00892 EamA-like transporter family IT971_16925 PF03466 LysR substrate binding domain IT971_16925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_16930 PF00248 Aldo/keto reductase family IT971_16935 PF01321 Creatinase/Prolidase N-terminal domain IT971_16935 PF00557 Metallopeptidase family M24 IT971_16950 PF01925 Sulfite exporter TauE/SafE IT971_16960 PF13361 UvrD-like helicase C-terminal domain IT971_16960 PF00580 UvrD/REP helicase N-terminal domain IT971_16980 PF00654 Voltage gated chloride channel IT971_16985 PF07690 Major Facilitator Superfamily IT971_16990 PF02574 Homocysteine S-methyltransferase IT971_16990 PF00809 Pterin binding enzyme IT971_16990 PF02310 B12 binding domain IT971_16990 PF02965 Vitamin B12 dependent methionine synthase, activation domain IT971_16990 PF02607 B12 binding domain IT971_16995 PF02574 Homocysteine S-methyltransferase IT971_16995 PF02310 B12 binding domain IT971_16995 PF00809 Pterin binding enzyme IT971_16995 PF02965 Vitamin B12 dependent methionine synthase, activation domain IT971_16995 PF02607 B12 binding domain IT971_17000 PF02219 Methylenetetrahydrofolate reductase IT971_17005 PF01209 ubiE/COQ5 methyltransferase family IT971_17010 PF04333 MlaA lipoprotein IT971_17020 PF12848 ABC transporter IT971_17020 PF00005 ABC transporter IT971_17030 PF00474 Sodium:solute symporter family IT971_17055 PF00528 Binding-protein-dependent transport system inner membrane component IT971_17060 PF00005 ABC transporter IT971_17060 PF03459 TOBE domain IT971_17070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IT971_17070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IT971_17075 PF01266 FAD dependent oxidoreductase IT971_17080 PF04267 Sarcosine oxidase, delta subunit family IT971_17085 PF01571 Aminomethyltransferase folate-binding domain IT971_17085 PF17806 Sarcosine oxidase A3 domain IT971_17085 PF07992 Pyridine nucleotide-disulphide oxidoreductase IT971_17085 PF08669 Glycine cleavage T-protein C-terminal barrel domain IT971_17100 PF00027 Cyclic nucleotide-binding domain IT971_17100 PF13545 Crp-like helix-turn-helix domain IT971_17120 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IT971_17125 PF10414 Sirohaem synthase dimerisation region IT971_17125 PF14824 Sirohaem biosynthesis protein central IT971_17125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IT971_17130 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IT971_17140 PF17805 AsnC-like ligand binding domain IT971_17145 PF17805 AsnC-like ligand binding domain IT971_17150 PF13404 AsnC-type helix-turn-helix domain IT971_17150 PF17805 AsnC-like ligand binding domain IT971_17155 PF17805 AsnC-like ligand binding domain IT971_17160 PF13186 Iron-sulfur cluster-binding domain IT971_17160 PF04055 Radical SAM superfamily IT971_17175 PF00510 Cytochrome c oxidase subunit III IT971_17180 PF00092 von Willebrand factor type A domain IT971_17185 PF07728 AAA domain (dynein-related subfamily) IT971_17185 PF08406 CbbQ/NirQ/NorQ C-terminal IT971_17190 PF00115 Cytochrome C and Quinol oxidase polypeptide I IT971_17195 PF00034 Cytochrome c IT971_17200 PF04405 Domain of Unknown function (DUF542) IT971_17200 PF01814 Hemerythrin HHE cation binding domain IT971_17210 PF01136 Peptidase family U32 IT971_17215 PF01136 Peptidase family U32 IT971_17230 PF12679 ABC-2 family transporter protein IT971_17235 PF00005 ABC transporter IT971_17245 PF13473 Cupredoxin-like domain IT971_17245 PF18793 Nitrous oxide reductase propeller repeat 2 IT971_17245 PF18764 Nitrous oxide reductase propeller repeat IT971_17250 PF04205 FMN-binding domain IT971_17250 PF12801 4Fe-4S binding domain IT971_17255 PF00072 Response regulator receiver domain IT971_17255 PF00486 Transcriptional regulatory protein, C terminal IT971_17260 PF02702 Osmosensitive K+ channel His kinase sensor domain IT971_17260 PF00512 His Kinase A (phospho-acceptor) domain IT971_17260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_17260 PF13492 GAF domain IT971_17260 PF13493 Domain of unknown function (DUF4118) IT971_17265 PF02669 K+-transporting ATPase, c chain IT971_17275 PF03814 Potassium-transporting ATPase A subunit IT971_17285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IT971_17285 PF02874 ATP synthase alpha/beta family, beta-barrel domain IT971_17290 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IT971_17305 PF00119 ATP synthase A chain IT971_17310 PF00137 ATP synthase subunit C IT971_17315 PF00430 ATP synthase B/B' CF(0) IT971_17320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IT971_17320 PF00306 ATP synthase alpha/beta chain, C terminal domain IT971_17320 PF02874 ATP synthase alpha/beta family, beta-barrel domain IT971_17330 PF03497 Anthrax toxin LF subunit IT971_17330 PF02382 N-terminal domain in RTX protein IT971_17330 PF06594 Haemolysin-type calcium binding protein related domain IT971_17330 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IT971_17340 PF00005 ABC transporter IT971_17340 PF00664 ABC transporter transmembrane region IT971_17340 PF03412 Peptidase C39 family IT971_17345 PF03497 Anthrax toxin LF subunit IT971_17345 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IT971_17345 PF02382 N-terminal domain in RTX protein IT971_17355 PF04546 Sigma-70, non-essential region IT971_17355 PF03979 Sigma-70 factor, region 1.1 IT971_17355 PF04542 Sigma-70 region 2 IT971_17355 PF04539 Sigma-70 region 3 IT971_17355 PF04545 Sigma-70, region 4 IT971_17355 PF00140 Sigma-70 factor, region 1.2 IT971_17360 PF10410 DnaB-helicase binding domain of primase IT971_17360 PF08278 DNA primase DnaG DnaB-binding IT971_17360 PF01807 CHC2 zinc finger IT971_17360 PF13662 Toprim domain IT971_17360 PF08275 DNA primase catalytic core, N-terminal domain IT971_17370 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IT971_17370 PF00117 Glutamine amidotransferase class-I IT971_17375 PF02142 MGS-like domain IT971_17375 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IT971_17375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IT971_17380 PF01272 Transcription elongation factor, GreA/GreB, C-term IT971_17380 PF03449 Transcription elongation factor, N-terminal IT971_17390 PF01037 Lrp/AsnC ligand binding domain IT971_17395 PF07992 Pyridine nucleotide-disulphide oxidoreductase IT971_17400 PF03466 LysR substrate binding domain IT971_17400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_17405 PF02743 Cache domain IT971_17405 PF00211 Adenylate and Guanylate cyclase catalytic domain IT971_17405 PF00672 HAMP domain IT971_17410 PF03764 Elongation factor G, domain IV IT971_17410 PF00679 Elongation factor G C-terminus IT971_17410 PF14492 Elongation Factor G, domain II IT971_17410 PF00009 Elongation factor Tu GTP binding domain IT971_17415 PF00210 Ferritin-like domain IT971_17420 PF01425 Amidase IT971_17430 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_17445 PF07286 Protein of unknown function (DUF1445) IT971_17450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_17450 PF03466 LysR substrate binding domain IT971_17455 PF00174 Oxidoreductase molybdopterin binding domain IT971_17465 PF17757 UvrB interaction domain IT971_17465 PF12344 Ultra-violet resistance protein B IT971_17465 PF04851 Type III restriction enzyme, res subunit IT971_17465 PF00271 Helicase conserved C-terminal domain IT971_17465 PF02151 UvrB/uvrC motif IT971_17470 PF00155 Aminotransferase class I and II IT971_17480 PF00733 Asparagine synthase IT971_17480 PF13537 Glutamine amidotransferase domain IT971_17485 PF00535 Glycosyl transferase family 2 IT971_17490 PF02627 Carboxymuconolactone decarboxylase family IT971_17495 PF00578 AhpC/TSA family IT971_17500 PF03466 LysR substrate binding domain IT971_17500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_17510 PF00107 Zinc-binding dehydrogenase IT971_17510 PF08240 Alcohol dehydrogenase GroES-like domain IT971_17515 PF06796 Periplasmic nitrate reductase protein NapE IT971_17530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IT971_17530 PF00384 Molybdopterin oxidoreductase IT971_17530 PF01568 Molydopterin dinucleotide binding domain IT971_17535 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) IT971_17540 PF03264 NapC/NirT cytochrome c family, N-terminal region IT971_17545 PF10649 Protein of unknown function (DUF2478) IT971_17545 PF03459 TOBE domain IT971_17545 PF00005 ABC transporter IT971_17550 PF00958 GMP synthase C terminal domain IT971_17550 PF00117 Glutamine amidotransferase class-I IT971_17555 PF01926 50S ribosome-binding GTPase IT971_17555 PF06071 Protein of unknown function (DUF933) IT971_17560 PF01195 Peptidyl-tRNA hydrolase IT971_17565 PF14693 Ribosomal protein TL5, C-terminal domain IT971_17565 PF01386 Ribosomal L25p family IT971_17570 PF14572 Phosphoribosyl synthetase-associated domain IT971_17570 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IT971_17580 PF02578 Multi-copper polyphenol oxidoreductase laccase IT971_17590 PF01790 Prolipoprotein diacylglyceryl transferase IT971_17595 PF01370 NAD dependent epimerase/dehydratase family IT971_17610 PF03807 NADP oxidoreductase coenzyme F420-dependent IT971_17610 PF14748 Pyrroline-5-carboxylate reductase dimerisation IT971_17625 PF01588 Putative tRNA binding domain IT971_17630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_17630 PF08447 PAS fold IT971_17630 PF13426 PAS domain IT971_17635 PF00175 Oxidoreductase NAD-binding domain IT971_17635 PF00970 Oxidoreductase FAD-binding domain IT971_17650 PF00512 His Kinase A (phospho-acceptor) domain IT971_17650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_17650 PF00672 HAMP domain IT971_17655 PF00486 Transcriptional regulatory protein, C terminal IT971_17655 PF00072 Response regulator receiver domain IT971_17660 PF12802 MarR family IT971_17665 PF01063 Amino-transferase class IV IT971_17670 PF13417 Glutathione S-transferase, N-terminal domain IT971_17670 PF00043 Glutathione S-transferase, C-terminal domain IT971_17675 PF00884 Sulfatase IT971_17675 PF12411 Choline sulfatase enzyme C terminal IT971_17680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_17680 PF03466 LysR substrate binding domain IT971_17690 PF01218 Coproporphyrinogen III oxidase IT971_17695 PF00588 SpoU rRNA Methylase family IT971_17700 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal IT971_17700 PF00355 Rieske [2Fe-2S] domain IT971_17705 PF00033 Cytochrome b/b6/petB IT971_17705 PF00032 Cytochrome b(C-terminal)/b6/petD IT971_17710 PF02167 Cytochrome C1 family IT971_17720 PF00753 Metallo-beta-lactamase superfamily IT971_17720 PF16123 Hydroxyacylglutathione hydrolase C-terminus IT971_17730 PF13407 Periplasmic binding protein domain IT971_17735 PF02653 Branched-chain amino acid transport system / permease component IT971_17740 PF00005 ABC transporter IT971_17755 PF03466 LysR substrate binding domain IT971_17755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_17770 PF02803 Thiolase, C-terminal domain IT971_17770 PF00108 Thiolase, N-terminal domain IT971_17775 PF01037 Lrp/AsnC ligand binding domain IT971_17790 PF07729 FCD domain IT971_17790 PF00392 Bacterial regulatory proteins, gntR family IT971_17795 PF00528 Binding-protein-dependent transport system inner membrane component IT971_17800 PF00528 Binding-protein-dependent transport system inner membrane component IT971_17805 PF00497 Bacterial extracellular solute-binding proteins, family 3 IT971_17810 PF00005 ABC transporter IT971_17815 PF01451 Low molecular weight phosphotyrosine protein phosphatase IT971_17825 PF05233 PHB accumulation regulatory domain IT971_17825 PF07879 PHB/PHA accumulation regulator DNA-binding domain IT971_17835 PF01381 Helix-turn-helix IT971_17845 PF01472 PUA domain IT971_17845 PF00696 Amino acid kinase family IT971_17850 PF01926 50S ribosome-binding GTPase IT971_17850 PF01018 GTP1/OBG IT971_17855 PF01016 Ribosomal L27 protein IT971_17860 PF00829 Ribosomal prokaryotic L21 protein IT971_17880 PF02350 UDP-N-acetylglucosamine 2-epimerase IT971_17885 PF16363 GDP-mannose 4,6 dehydratase IT971_17890 PF01370 NAD dependent epimerase/dehydratase family IT971_17900 PF00733 Asparagine synthase IT971_17900 PF13537 Glutamine amidotransferase domain IT971_17910 PF00733 Asparagine synthase IT971_17910 PF13537 Glutamine amidotransferase domain IT971_17925 PF14524 Wzt C-terminal domain IT971_17925 PF00005 ABC transporter IT971_17935 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IT971_17940 PF00132 Bacterial transferase hexapeptide (six repeats) IT971_17945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IT971_17945 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IT971_17955 PF01325 Iron dependent repressor, N-terminal DNA binding domain IT971_17955 PF02742 Iron dependent repressor, metal binding and dimerisation domain IT971_17960 PF01297 Zinc-uptake complex component A periplasmic IT971_17965 PF00005 ABC transporter IT971_17970 PF00950 ABC 3 transport family IT971_17975 PF00950 ABC 3 transport family IT971_17995 PF01618 MotA/TolQ/ExbB proton channel family IT971_18000 PF00691 OmpA family IT971_18000 PF13677 Membrane MotB of proton-channel complex MotA/MotB IT971_18010 PF01119 DNA mismatch repair protein, C-terminal domain IT971_18010 PF08676 MutL C terminal dimerisation domain IT971_18015 PF05193 Peptidase M16 inactive domain IT971_18020 PF05193 Peptidase M16 inactive domain IT971_18020 PF00675 Insulinase (Peptidase family M16) IT971_18030 PF01252 Signal peptidase (SPase) II IT971_18035 PF00133 tRNA synthetases class I (I, L, M and V) IT971_18035 PF08264 Anticodon-binding domain of tRNA IT971_18040 PF06574 FAD synthetase IT971_18040 PF01687 Riboflavin kinase IT971_18045 PF01575 MaoC like domain IT971_18050 PF01209 ubiE/COQ5 methyltransferase family IT971_18100 PF02872 5'-nucleotidase, C-terminal domain IT971_18100 PF00149 Calcineurin-like phosphoesterase IT971_18110 PF12833 Helix-turn-helix domain IT971_18110 PF02311 AraC-like ligand binding domain IT971_18125 PF02558 Ketopantoate reductase PanE/ApbA IT971_18125 PF08546 Ketopantoate reductase PanE/ApbA C terminal IT971_18130 PF00795 Carbon-nitrogen hydrolase IT971_18135 PF13416 Bacterial extracellular solute-binding protein IT971_18140 PF00528 Binding-protein-dependent transport system inner membrane component IT971_18145 PF00528 Binding-protein-dependent transport system inner membrane component IT971_18150 PF00005 ABC transporter IT971_18150 PF08402 TOBE domain IT971_18155 PF02515 CoA-transferase family III IT971_18160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IT971_18160 PF02770 Acyl-CoA dehydrogenase, middle domain IT971_18160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IT971_18165 PF03466 LysR substrate binding domain IT971_18165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_18180 PF04209 homogentisate 1,2-dioxygenase IT971_18190 PF00857 Isochorismatase family IT971_18195 PF00857 Isochorismatase family IT971_18200 PF03466 LysR substrate binding domain IT971_18200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_18220 PF00561 alpha/beta hydrolase fold IT971_18245 PF11953 Domain of unknown function (DUF3470) IT971_18245 PF00037 4Fe-4S binding domain IT971_18250 PF00990 Diguanylate cyclase, GGDEF domain IT971_18250 PF00563 EAL domain IT971_18250 PF03707 Bacterial signalling protein N terminal repeat IT971_18255 PF00989 PAS fold IT971_18255 PF01627 Hpt domain IT971_18255 PF00072 Response regulator receiver domain IT971_18255 PF00497 Bacterial extracellular solute-binding proteins, family 3 IT971_18255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_18255 PF00512 His Kinase A (phospho-acceptor) domain IT971_18265 PF00512 His Kinase A (phospho-acceptor) domain IT971_18265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_18265 PF01590 GAF domain IT971_18265 PF00360 Phytochrome region IT971_18265 PF08446 PAS fold IT971_18275 PF04304 Protein of unknown function (DUF454) IT971_18280 PF00472 RF-1 domain IT971_18285 PF00440 Bacterial regulatory proteins, tetR family IT971_18295 PF01351 Ribonuclease HII IT971_18300 PF13302 Acetyltransferase (GNAT) domain IT971_18305 PF03334 Na+/H+ antiporter subunit IT971_18310 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) IT971_18315 PF01899 Na+/H+ ion antiporter subunit IT971_18320 PF00361 Proton-conducting membrane transporter IT971_18325 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IT971_18330 PF00361 Proton-conducting membrane transporter IT971_18330 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter IT971_18330 PF13244 Domain of unknown function (DUF4040) IT971_18330 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IT971_18340 PF14535 AMP-binding enzyme C-terminal domain IT971_18340 PF00501 AMP-binding enzyme IT971_18345 PF00005 ABC transporter IT971_18360 PF02653 Branched-chain amino acid transport system / permease component IT971_18365 PF00501 AMP-binding enzyme IT971_18370 PF12399 Branched-chain amino acid ATP-binding cassette transporter IT971_18370 PF00005 ABC transporter IT971_18375 PF00330 Aconitase family (aconitate hydratase) IT971_18375 PF00694 Aconitase C-terminal domain IT971_18380 PF00563 EAL domain IT971_18380 PF00990 Diguanylate cyclase, GGDEF domain IT971_18380 PF03707 Bacterial signalling protein N terminal repeat IT971_18385 PF00209 Sodium:neurotransmitter symporter family IT971_18395 PF00005 ABC transporter IT971_18400 PF03379 CcmB protein IT971_18405 PF01578 Cytochrome C assembly protein IT971_18415 PF03100 CcmE IT971_18420 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IT971_18420 PF01578 Cytochrome C assembly protein IT971_18425 PF08534 Redoxin IT971_18430 PF03918 Cytochrome C biogenesis protein IT971_18435 PF03918 Cytochrome C biogenesis protein IT971_18440 PF08220 DeoR-like helix-turn-helix domain IT971_18440 PF00455 DeoR C terminal sensor domain IT971_18445 PF01791 DeoC/LacD family aldolase IT971_18450 PF13407 Periplasmic binding protein domain IT971_18455 PF00005 ABC transporter IT971_18460 PF02653 Branched-chain amino acid transport system / permease component IT971_18465 PF02653 Branched-chain amino acid transport system / permease component IT971_18475 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IT971_18475 PF00294 pfkB family carbohydrate kinase IT971_18485 PF10145 Phage-related minor tail protein IT971_18485 PF01464 Transglycosylase SLT domain IT971_18485 PF01551 Peptidase family M23 IT971_18490 PF03167 Uracil DNA glycosylase superfamily IT971_18500 PF00171 Aldehyde dehydrogenase family IT971_18505 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IT971_18505 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IT971_18510 PF03466 LysR substrate binding domain IT971_18510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_18525 PF01546 Peptidase family M20/M25/M40 IT971_18525 PF07687 Peptidase dimerisation domain IT971_18550 PF00288 GHMP kinases N terminal domain IT971_18550 PF08544 GHMP kinases C terminal IT971_18565 PF03932 CutC family IT971_18570 PF00480 ROK family IT971_18575 PF05193 Peptidase M16 inactive domain IT971_18575 PF00675 Insulinase (Peptidase family M16) IT971_18580 PF14821 Threonine synthase N terminus IT971_18580 PF00291 Pyridoxal-phosphate dependent enzyme IT971_18585 PF13545 Crp-like helix-turn-helix domain IT971_18585 PF00027 Cyclic nucleotide-binding domain IT971_18590 PF02074 Carboxypeptidase Taq (M32) metallopeptidase IT971_18595 PF02104 SURF1 family IT971_18605 PF00510 Cytochrome c oxidase subunit III IT971_18610 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 IT971_18620 PF01040 UbiA prenyltransferase family IT971_18625 PF00115 Cytochrome C and Quinol oxidase polypeptide I IT971_18630 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IT971_18630 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IT971_18640 PF02622 Uncharacterized ACR, COG1678 IT971_18645 PF02683 Cytochrome C biogenesis protein transmembrane region IT971_18645 PF11412 Disulphide bond corrector protein DsbC IT971_18650 PF00462 Glutaredoxin IT971_18650 PF08534 Redoxin IT971_18665 PF00266 Aminotransferase class-V IT971_18670 PF02347 Glycine cleavage system P-protein IT971_18675 PF01597 Glycine cleavage H-protein IT971_18680 PF01571 Aminomethyltransferase folate-binding domain IT971_18680 PF08669 Glycine cleavage T-protein C-terminal barrel domain IT971_18690 PF02401 LytB protein IT971_18695 PF01636 Phosphotransferase enzyme family IT971_18700 PF00075 RNase H IT971_18705 PF03707 Bacterial signalling protein N terminal repeat IT971_18705 PF00990 Diguanylate cyclase, GGDEF domain IT971_18705 PF00563 EAL domain IT971_18710 PF02310 B12 binding domain IT971_18710 PF01642 Methylmalonyl-CoA mutase IT971_18715 PF08240 Alcohol dehydrogenase GroES-like domain IT971_18715 PF00107 Zinc-binding dehydrogenase IT971_18720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IT971_18720 PF02770 Acyl-CoA dehydrogenase, middle domain IT971_18720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IT971_18725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_18725 PF12729 Four helix bundle sensory module for signal transduction IT971_18725 PF00672 HAMP domain IT971_18730 PF00970 Oxidoreductase FAD-binding domain IT971_18730 PF00175 Oxidoreductase NAD-binding domain IT971_18730 PF00111 2Fe-2S iron-sulfur cluster binding domain IT971_18735 PF05221 S-adenosyl-L-homocysteine hydrolase IT971_18735 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IT971_18740 PF02798 Glutathione S-transferase, N-terminal domain IT971_18745 PF02560 Cyanate lyase C-terminal domain IT971_18750 PF00005 ABC transporter IT971_18755 PF00528 Binding-protein-dependent transport system inner membrane component IT971_18765 PF00158 Sigma-54 interaction domain IT971_18765 PF01590 GAF domain IT971_18775 PF01923 Cobalamin adenosyltransferase IT971_18780 PF01012 Electron transfer flavoprotein domain IT971_18785 PF01012 Electron transfer flavoprotein domain IT971_18785 PF00766 Electron transfer flavoprotein FAD-binding domain IT971_18790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IT971_18790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IT971_18795 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IT971_18795 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IT971_18800 PF00294 pfkB family carbohydrate kinase IT971_18805 PF00578 AhpC/TSA family IT971_18810 PF00206 Lyase IT971_18810 PF14698 Argininosuccinate lyase C-terminal IT971_18820 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IT971_18820 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IT971_18825 PF13533 Biotin-lipoyl like IT971_18840 PF12833 Helix-turn-helix domain IT971_18840 PF02311 AraC-like ligand binding domain IT971_18860 PF00005 ABC transporter IT971_18890 PF00892 EamA-like transporter family IT971_18895 PF02153 Prephenate dehydrogenase IT971_18900 PF00155 Aminotransferase class I and II IT971_18910 PF00561 alpha/beta hydrolase fold IT971_18915 PF00561 alpha/beta hydrolase fold IT971_18915 PF07021 Methionine biosynthesis protein MetW IT971_18930 PF02391 MoaE protein IT971_18935 PF01066 CDP-alcohol phosphatidyltransferase IT971_18940 PF00860 Permease family IT971_18945 PF08459 UvrC Helix-hairpin-helix N-terminal IT971_18945 PF02151 UvrB/uvrC motif IT971_18945 PF12826 Helix-hairpin-helix motif IT971_18945 PF01541 GIY-YIG catalytic domain IT971_18950 PF02152 Dihydroneopterin aldolase IT971_18960 PF01699 Sodium/calcium exchanger protein IT971_18965 PF02254 TrkA-N domain IT971_18965 PF00999 Sodium/hydrogen exchanger family IT971_18970 PF00486 Transcriptional regulatory protein, C terminal IT971_18970 PF00072 Response regulator receiver domain IT971_18975 PF01895 PhoU domain IT971_18980 PF00005 ABC transporter IT971_18985 PF00528 Binding-protein-dependent transport system inner membrane component IT971_18990 PF00528 Binding-protein-dependent transport system inner membrane component IT971_18995 PF12849 PBP superfamily domain IT971_19005 PF13183 4Fe-4S dicluster domain IT971_19005 PF02754 Cysteine-rich domain IT971_19010 PF01565 FAD binding domain IT971_19015 PF01565 FAD binding domain IT971_19015 PF02913 FAD linked oxidases, C-terminal domain IT971_19020 PF02785 Biotin carboxylase C-terminal domain IT971_19020 PF00289 Biotin carboxylase, N-terminal domain IT971_19020 PF00364 Biotin-requiring enzyme IT971_19020 PF02436 Conserved carboxylase domain IT971_19020 PF00682 HMGL-like IT971_19020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IT971_19025 PF17200 Single Cache domain 2 IT971_19025 PF07730 Histidine kinase IT971_19030 PF00072 Response regulator receiver domain IT971_19030 PF00196 Bacterial regulatory proteins, luxR family IT971_19035 PF00027 Cyclic nucleotide-binding domain IT971_19035 PF13545 Crp-like helix-turn-helix domain IT971_19045 PF01258 Prokaryotic dksA/traR C4-type zinc finger IT971_19060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IT971_19065 PF08448 PAS fold IT971_19065 PF00072 Response regulator receiver domain IT971_19065 PF13188 PAS domain IT971_19065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_19065 PF00512 His Kinase A (phospho-acceptor) domain IT971_19080 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IT971_19080 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IT971_19085 PF01645 Conserved region in glutamate synthase IT971_19085 PF00310 Glutamine amidotransferases class-II IT971_19085 PF01493 GXGXG motif IT971_19085 PF04898 Glutamate synthase central domain IT971_19090 PF07992 Pyridine nucleotide-disulphide oxidoreductase IT971_19090 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IT971_19095 PF02673 Bacitracin resistance protein BacA IT971_19100 PF13302 Acetyltransferase (GNAT) domain IT971_19105 PF01022 Bacterial regulatory protein, arsR family IT971_19115 PF00574 Clp protease IT971_19140 PF00881 Nitroreductase family IT971_19155 PF18146 Damage-inducible protein CinA KH domain IT971_19155 PF02464 Competence-damaged protein IT971_19155 PF00994 Probable molybdopterin binding domain IT971_19160 PF00293 NUDIX domain IT971_19180 PF02810 SEC-C motif IT971_19180 PF07516 SecA Wing and Scaffold domain IT971_19180 PF07517 SecA DEAD-like domain IT971_19180 PF01043 SecA preprotein cross-linking domain IT971_19195 PF00639 PPIC-type PPIASE domain IT971_19200 PF01960 ArgJ family IT971_19210 PF08668 HDOD domain IT971_19220 PF00512 His Kinase A (phospho-acceptor) domain IT971_19220 PF13188 PAS domain IT971_19220 PF08448 PAS fold IT971_19220 PF00072 Response regulator receiver domain IT971_19220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_19225 PF00356 Bacterial regulatory proteins, lacI family IT971_19230 PF01547 Bacterial extracellular solute-binding protein IT971_19235 PF00528 Binding-protein-dependent transport system inner membrane component IT971_19240 PF00528 Binding-protein-dependent transport system inner membrane component IT971_19245 PF04616 Glycosyl hydrolases family 43 IT971_19245 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain IT971_19250 PF00005 ABC transporter IT971_19250 PF08402 TOBE domain IT971_19255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IT971_19255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IT971_19265 PF02694 Uncharacterised BCR, YnfA/UPF0060 family IT971_19275 PF01037 Lrp/AsnC ligand binding domain IT971_19280 PF00351 Biopterin-dependent aromatic amino acid hydroxylase IT971_19285 PF00072 Response regulator receiver domain IT971_19285 PF00196 Bacterial regulatory proteins, luxR family IT971_19290 PF01642 Methylmalonyl-CoA mutase IT971_19295 PF02310 B12 binding domain IT971_19295 PF01642 Methylmalonyl-CoA mutase IT971_19325 PF01207 Dihydrouridine synthase (Dus) IT971_19330 PF12708 Pectate lyase superfamily protein IT971_19330 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IT971_19330 PF13229 Right handed beta helix region IT971_19335 PF00529 HlyD membrane-fusion protein of T1SS IT971_19340 PF00664 ABC transporter transmembrane region IT971_19340 PF00005 ABC transporter IT971_19345 PF01435 Peptidase family M48 IT971_19355 PF01914 MarC family integral membrane protein IT971_19360 PF02272 DHHA1 domain IT971_19360 PF00571 CBS domain IT971_19360 PF01368 DHH family IT971_19360 PF12627 Probable RNA and SrmB- binding site of polymerase A IT971_19360 PF01743 Poly A polymerase head domain IT971_19365 PF01699 Sodium/calcium exchanger protein IT971_19375 PF01053 Cys/Met metabolism PLP-dependent enzyme IT971_19380 PF18024 Helix-turn-helix domain IT971_19380 PF00158 Sigma-54 interaction domain IT971_19385 PF00106 short chain dehydrogenase IT971_19395 PF03466 LysR substrate binding domain IT971_19395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_19400 PF00107 Zinc-binding dehydrogenase IT971_19400 PF08240 Alcohol dehydrogenase GroES-like domain IT971_19405 PF00756 Putative esterase IT971_19410 PF02361 Cobalt transport protein IT971_19415 PF00005 ABC transporter IT971_19420 PF02632 BioY family IT971_19425 PF02492 CobW/HypB/UreG, nucleotide-binding domain IT971_19430 PF01730 UreF IT971_19435 PF05194 UreE urease accessory protein, C-terminal domain IT971_19435 PF02814 UreE urease accessory protein, N-terminal domain IT971_19440 PF00449 Urease alpha-subunit, N-terminal domain IT971_19440 PF01979 Amidohydrolase family IT971_19445 PF00699 Urease beta subunit IT971_19450 PF00547 Urease, gamma subunit IT971_19455 PF01774 UreD urease accessory protein IT971_19460 PF00005 ABC transporter IT971_19465 PF12399 Branched-chain amino acid ATP-binding cassette transporter IT971_19465 PF00005 ABC transporter IT971_19475 PF02653 Branched-chain amino acid transport system / permease component IT971_19485 PF03466 LysR substrate binding domain IT971_19485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_19500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_19500 PF03466 LysR substrate binding domain IT971_19505 PF00850 Histone deacetylase domain IT971_19510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_19515 PF08447 PAS fold IT971_19515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_19525 PF02608 ABC transporter substrate-binding protein PnrA-like IT971_19540 PF00005 ABC transporter IT971_19545 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IT971_19555 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IT971_19555 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IT971_19560 PF00111 2Fe-2S iron-sulfur cluster binding domain IT971_19560 PF01799 [2Fe-2S] binding domain IT971_19565 PF00576 HIUase/Transthyretin family IT971_19575 PF09349 OHCU decarboxylase IT971_19575 PF01014 Uricase IT971_19580 PF03561 Allantoicase repeat IT971_19585 PF04115 Ureidoglycolate lyase IT971_19590 PF13419 Haloacid dehalogenase-like hydrolase IT971_19605 PF13085 2Fe-2S iron-sulfur cluster binding domain IT971_19610 PF00890 FAD binding domain IT971_19610 PF02910 Fumarate reductase flavoprotein C-term IT971_19620 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IT971_19625 PF01575 MaoC like domain IT971_19630 PF03328 HpcH/HpaI aldolase/citrate lyase family IT971_19635 PF04972 BON domain IT971_19635 PF00691 OmpA family IT971_19650 PF13533 Biotin-lipoyl like IT971_19670 PF00144 Beta-lactamase IT971_19685 PF13635 Domain of unknown function (DUF4143) IT971_19685 PF13173 AAA domain IT971_19700 PF04012 PspA/IM30 family IT971_19705 PF02954 Bacterial regulatory protein, Fis family IT971_19705 PF00158 Sigma-54 interaction domain IT971_19720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IT971_19720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IT971_19720 PF02770 Acyl-CoA dehydrogenase, middle domain IT971_19725 PF00484 Carbonic anhydrase IT971_19740 PF02803 Thiolase, C-terminal domain IT971_19740 PF00108 Thiolase, N-terminal domain IT971_19745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IT971_19745 PF02770 Acyl-CoA dehydrogenase, middle domain IT971_19745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IT971_19760 PF00270 DEAD/DEAH box helicase IT971_19760 PF00271 Helicase conserved C-terminal domain IT971_19765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_19765 PF08269 Cache domain IT971_19775 PF02348 Cytidylyltransferase IT971_19780 PF00034 Cytochrome c IT971_19785 PF00459 Inositol monophosphatase family IT971_19795 PF01810 LysE type translocator IT971_19810 PF03471 Transporter associated domain IT971_19810 PF00999 Sodium/hydrogen exchanger family IT971_19810 PF02080 TrkA-C domain IT971_19815 PF01037 Lrp/AsnC ligand binding domain IT971_19835 PF00106 short chain dehydrogenase IT971_19840 PF01329 Pterin 4 alpha carbinolamine dehydratase IT971_19845 PF03167 Uracil DNA glycosylase superfamily IT971_19855 PF02789 Cytosol aminopeptidase family, N-terminal domain IT971_19855 PF00883 Cytosol aminopeptidase family, catalytic domain IT971_19875 PF00005 ABC transporter IT971_19875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IT971_19880 PF12911 N-terminal TM domain of oligopeptide transport permease C IT971_19880 PF00528 Binding-protein-dependent transport system inner membrane component IT971_19885 PF00528 Binding-protein-dependent transport system inner membrane component IT971_19890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IT971_19895 PF03466 LysR substrate binding domain IT971_19895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_19910 PF14765 Polyketide synthase dehydratase IT971_19910 PF00698 Acyl transferase domain IT971_19910 PF08240 Alcohol dehydrogenase GroES-like domain IT971_19910 PF00109 Beta-ketoacyl synthase, N-terminal domain IT971_19910 PF08659 KR domain IT971_19910 PF00550 Phosphopantetheine attachment site IT971_19910 PF16197 Ketoacyl-synthetase C-terminal extension IT971_19910 PF02801 Beta-ketoacyl synthase, C-terminal domain IT971_19925 PF02254 TrkA-N domain IT971_19925 PF00999 Sodium/hydrogen exchanger family IT971_19940 PF01965 DJ-1/PfpI family IT971_19965 PF01037 Lrp/AsnC ligand binding domain IT971_19970 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_19980 PF03480 Bacterial extracellular solute-binding protein, family 7 IT971_19985 PF17391 Urocanase N-terminal domain IT971_19985 PF01175 Urocanase Rossmann-like domain IT971_19985 PF17392 Urocanase C-terminal domain IT971_19995 PF00221 Aromatic amino acid lyase IT971_20000 PF07969 Amidohydrolase family IT971_20010 PF07702 UTRA domain IT971_20010 PF00392 Bacterial regulatory proteins, gntR family IT971_20020 PF02834 LigT like Phosphoesterase IT971_20025 PF05726 Pirin C-terminal cupin domain IT971_20025 PF02678 Pirin IT971_20030 PF00248 Aldo/keto reductase family IT971_20045 PF13472 GDSL-like Lipase/Acylhydrolase family IT971_20050 PF00005 ABC transporter IT971_20060 PF00501 AMP-binding enzyme IT971_20060 PF13193 AMP-binding enzyme C-terminal domain IT971_20070 PF01027 Inhibitor of apoptosis-promoting Bax1 IT971_20080 PF01435 Peptidase family M48 IT971_20090 PF00873 AcrB/AcrD/AcrF family IT971_20095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IT971_20105 PF05088 Bacterial NAD-glutamate dehydrogenase IT971_20140 PF00085 Thioredoxin IT971_20150 PF03966 Trm112p-like protein IT971_20160 PF03922 OmpW family IT971_20165 PF01494 FAD binding domain IT971_20170 PF00543 Nitrogen regulatory protein P-II IT971_20175 PF00909 Ammonium Transporter Family IT971_20185 PF01580 FtsK/SpoIIIE family IT971_20185 PF09397 Ftsk gamma domain IT971_20185 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IT971_20185 PF17854 FtsK alpha domain IT971_20190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_20190 PF08269 Cache domain IT971_20195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_20195 PF08269 Cache domain IT971_20200 PF00085 Thioredoxin IT971_20205 PF13361 UvrD-like helicase C-terminal domain IT971_20205 PF00580 UvrD/REP helicase N-terminal domain IT971_20205 PF12705 PD-(D/E)XK nuclease superfamily IT971_20210 PF12705 PD-(D/E)XK nuclease superfamily IT971_20215 PF12804 MobA-like NTP transferase domain IT971_20225 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IT971_20230 PF07992 Pyridine nucleotide-disulphide oxidoreductase IT971_20255 PF01638 HxlR-like helix-turn-helix IT971_20260 PF03928 Haem-degrading IT971_20265 PF00009 Elongation factor Tu GTP binding domain IT971_20265 PF00679 Elongation factor G C-terminus IT971_20265 PF03144 Elongation factor Tu domain 2 IT971_20265 PF06421 GTP-binding protein LepA C-terminus IT971_20270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_20270 PF00512 His Kinase A (phospho-acceptor) domain IT971_20270 PF01590 GAF domain IT971_20270 PF08446 PAS fold IT971_20270 PF00360 Phytochrome region IT971_20280 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IT971_20280 PF01588 Putative tRNA binding domain IT971_20280 PF03483 B3/4 domain IT971_20280 PF03147 Ferredoxin-fold anticodon binding domain IT971_20280 PF03484 tRNA synthetase B5 domain IT971_20285 PF01409 tRNA synthetases class II core domain (F) IT971_20285 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IT971_20290 PF00453 Ribosomal protein L20 IT971_20295 PF01632 Ribosomal protein L35 IT971_20300 PF00072 Response regulator receiver domain IT971_20305 PF05198 Translation initiation factor IF-3, N-terminal domain IT971_20305 PF00707 Translation initiation factor IF-3, C-terminal domain IT971_20315 PF00534 Glycosyl transferases group 1 IT971_20315 PF13477 Glycosyl transferase 4-like IT971_20340 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IT971_20340 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IT971_20345 PF00814 Glycoprotease family IT971_20350 PF03900 Porphobilinogen deaminase, C-terminal domain IT971_20350 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IT971_20370 PF02142 MGS-like domain IT971_20370 PF01808 AICARFT/IMPCHase bienzyme IT971_20375 PF02719 Polysaccharide biosynthesis protein IT971_20380 PF00953 Glycosyl transferase family 4 IT971_20385 PF01029 NusB family IT971_20385 PF01189 16S rRNA methyltransferase RsmB/F IT971_20390 PF00834 Ribulose-phosphate 3 epimerase family IT971_20395 PF07896 Protein of unknown function (DUF1674) IT971_20400 PF16921 Tex protein YqgF-like domain IT971_20400 PF09371 Tex-like protein N-terminal domain IT971_20400 PF00575 S1 RNA binding domain IT971_20400 PF17674 HHH domain IT971_20415 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IT971_20415 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IT971_20425 PF00171 Aldehyde dehydrogenase family IT971_20430 PF00202 Aminotransferase class-III IT971_20445 PF03466 LysR substrate binding domain IT971_20445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_20450 PF00672 HAMP domain IT971_20450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_20450 PF12729 Four helix bundle sensory module for signal transduction IT971_20455 PF07690 Major Facilitator Superfamily IT971_20470 PF05433 Glycine zipper 2TM domain IT971_20470 PF16998 17 kDa outer membrane surface antigen IT971_20485 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IT971_20490 PF13193 AMP-binding enzyme C-terminal domain IT971_20490 PF00501 AMP-binding enzyme IT971_20495 PF13411 MerR HTH family regulatory protein IT971_20500 PF00108 Thiolase, N-terminal domain IT971_20500 PF02803 Thiolase, C-terminal domain IT971_20505 PF00378 Enoyl-CoA hydratase/isomerase IT971_20505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IT971_20505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IT971_20510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IT971_20510 PF12806 Acetyl-CoA dehydrogenase C-terminal like IT971_20510 PF02770 Acyl-CoA dehydrogenase, middle domain IT971_20510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IT971_20520 PF00378 Enoyl-CoA hydratase/isomerase IT971_20525 PF00106 short chain dehydrogenase IT971_20535 PF00535 Glycosyl transferase family 2 IT971_20540 PF04349 Periplasmic glucan biosynthesis protein, MdoG IT971_20550 PF01970 Tripartite tricarboxylate transporter TctA family IT971_20565 PF01925 Sulfite exporter TauE/SafE IT971_20570 PF00392 Bacterial regulatory proteins, gntR family IT971_20570 PF07729 FCD domain IT971_20575 PF01177 Asp/Glu/Hydantoin racemase IT971_20580 PF00528 Binding-protein-dependent transport system inner membrane component IT971_20585 PF00528 Binding-protein-dependent transport system inner membrane component IT971_20595 PF00005 ABC transporter IT971_20595 PF08402 TOBE domain IT971_20605 PF00171 Aldehyde dehydrogenase family IT971_20610 PF02417 Chromate transporter IT971_20615 PF09828 Chromate resistance exported protein IT971_20655 PF03466 LysR substrate binding domain IT971_20655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_20665 PF03466 LysR substrate binding domain IT971_20665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_20670 PF02678 Pirin IT971_20670 PF17954 Quercetinase C-terminal cupin domain IT971_20680 PF00486 Transcriptional regulatory protein, C terminal IT971_20680 PF00072 Response regulator receiver domain IT971_20685 PF02954 Bacterial regulatory protein, Fis family IT971_20685 PF00158 Sigma-54 interaction domain IT971_20685 PF00072 Response regulator receiver domain IT971_20690 PF00512 His Kinase A (phospho-acceptor) domain IT971_20690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_20700 PF05231 MASE1 IT971_20700 PF00563 EAL domain IT971_20705 PF02954 Bacterial regulatory protein, Fis family IT971_20705 PF00158 Sigma-54 interaction domain IT971_20705 PF00072 Response regulator receiver domain IT971_20710 PF00512 His Kinase A (phospho-acceptor) domain IT971_20710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_20715 PF00486 Transcriptional regulatory protein, C terminal IT971_20715 PF00072 Response regulator receiver domain IT971_20730 PF08281 Sigma-70, region 4 IT971_20730 PF04542 Sigma-70 region 2 IT971_20745 PF02515 CoA-transferase family III IT971_20755 PF03401 Tripartite tricarboxylate transporter family receptor IT971_20765 PF01970 Tripartite tricarboxylate transporter TctA family IT971_20770 PF00672 HAMP domain IT971_20770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_20775 PF05145 Transition state regulatory protein AbrB IT971_20780 PF02397 Bacterial sugar transferase IT971_20790 PF02563 Polysaccharide biosynthesis/export protein IT971_20795 PF00205 Thiamine pyrophosphate enzyme, central domain IT971_20795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IT971_20795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IT971_20820 PF00005 ABC transporter IT971_20830 PF00291 Pyridoxal-phosphate dependent enzyme IT971_20835 PF00290 Tryptophan synthase alpha chain IT971_20840 PF01039 Carboxyl transferase domain IT971_20840 PF17848 Acetyl-coA carboxylase zinc finger domain IT971_20845 PF02875 Mur ligase family, glutamate ligase domain IT971_20845 PF08245 Mur ligase middle domain IT971_20855 PF01367 5'-3' exonuclease, C-terminal SAM fold IT971_20855 PF00476 DNA polymerase family A IT971_20855 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IT971_20855 PF01612 3'-5' exonuclease IT971_20860 PF01113 Dihydrodipicolinate reductase, N-terminus IT971_20860 PF05173 Dihydrodipicolinate reductase, C-terminus IT971_20865 PF00684 DnaJ central domain IT971_20865 PF00226 DnaJ domain IT971_20865 PF01556 DnaJ C terminal domain IT971_20870 PF00012 Hsp70 protein IT971_20880 PF00730 HhH-GPD superfamily base excision DNA repair protein IT971_20880 PF00633 Helix-hairpin-helix motif IT971_20880 PF10576 Iron-sulfur binding domain of endonuclease III IT971_20890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IT971_20895 PF02021 Uncharacterised protein family UPF0102 IT971_20915 PF13369 Transglutaminase-like superfamily IT971_20920 PF00294 pfkB family carbohydrate kinase IT971_20925 PF00679 Elongation factor G C-terminus IT971_20925 PF00009 Elongation factor Tu GTP binding domain IT971_20925 PF03144 Elongation factor Tu domain 2 IT971_20930 PF07690 Major Facilitator Superfamily IT971_20935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IT971_20940 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IT971_20940 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus IT971_20950 PF00005 ABC transporter IT971_20965 PF01380 SIS domain IT971_20965 PF00571 CBS domain IT971_20970 PF01612 3'-5' exonuclease IT971_20970 PF00570 HRDC domain IT971_20980 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 IT971_20980 PF00535 Glycosyl transferase family 2 IT971_20990 PF06969 HemN C-terminal domain IT971_20990 PF04055 Radical SAM superfamily IT971_20995 PF01725 Ham1 family IT971_21000 PF01138 3' exoribonuclease family, domain 1 IT971_21000 PF03725 3' exoribonuclease family, domain 2 IT971_21005 PF01628 HrcA protein C terminal domain IT971_21010 PF01025 GrpE IT971_21015 PF02146 Sir2 family IT971_21045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_21045 PF03466 LysR substrate binding domain IT971_21050 PF16363 GDP-mannose 4,6 dehydratase IT971_21060 PF00719 Inorganic pyrophosphatase IT971_21075 PF01106 NifU-like domain IT971_21080 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IT971_21095 PF03949 Malic enzyme, NAD binding domain IT971_21095 PF01515 Phosphate acetyl/butaryl transferase IT971_21095 PF00390 Malic enzyme, N-terminal domain IT971_21105 PF00488 MutS domain V IT971_21105 PF05190 MutS family domain IV IT971_21105 PF05192 MutS domain III IT971_21105 PF01624 MutS domain I IT971_21105 PF05188 MutS domain II IT971_21110 PF08335 GlnD PII-uridylyltransferase IT971_21110 PF01966 HD domain IT971_21110 PF01909 Nucleotidyltransferase domain IT971_21115 PF03023 Lipid II flippase MurJ IT971_21120 PF00579 tRNA synthetases class I (W and Y) IT971_21130 PF00925 GTP cyclohydrolase II IT971_21135 PF00072 Response regulator receiver domain IT971_21135 PF00486 Transcriptional regulatory protein, C terminal IT971_21145 PF02581 Thiamine monophosphate synthase IT971_21165 PF13609 Gram-negative porin IT971_21190 PF02195 ParB-like nuclease domain IT971_21190 PF17762 HTH domain found in ParB protein IT971_21195 PF13614 AAA domain IT971_21200 PF02527 rRNA small subunit methyltransferase G IT971_21205 PF13932 GidA associated domain IT971_21205 PF01134 Glucose inhibited division protein A IT971_21210 PF01926 50S ribosome-binding GTPase IT971_21210 PF12631 MnmE helical domain IT971_21210 PF10396 GTP-binding protein TrmE N-terminus IT971_21225 PF03190 Protein of unknown function, DUF255 IT971_21235 PF00107 Zinc-binding dehydrogenase IT971_21235 PF08240 Alcohol dehydrogenase GroES-like domain IT971_21240 PF04607 Region found in RelA / SpoT proteins IT971_21240 PF02824 TGS domain IT971_21240 PF13291 ACT domain IT971_21250 PF07497 Rho termination factor, RNA-binding domain IT971_21250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IT971_21250 PF07498 Rho termination factor, N-terminal domain IT971_21275 PF00929 Exonuclease IT971_21280 PF01121 Dephospho-CoA kinase IT971_21285 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IT971_21285 PF08501 Shikimate dehydrogenase substrate binding domain IT971_21285 PF01488 Shikimate / quinate 5-dehydrogenase IT971_21290 PF02545 Maf-like protein IT971_21295 PF03618 Kinase/pyrophosphorylase IT971_21300 PF01208 Uroporphyrinogen decarboxylase (URO-D) IT971_21305 PF00762 Ferrochelatase IT971_21310 PF03653 Uncharacterised protein family (UPF0093) IT971_21315 PF02556 Preprotein translocase subunit SecB IT971_21320 PF04186 FxsA cytoplasmic membrane protein IT971_21340 PF04055 Radical SAM superfamily IT971_21370 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IT971_21370 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IT971_21415 PF01381 Helix-turn-helix IT971_21425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_21425 PF00672 HAMP domain IT971_21430 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IT971_21435 PF16868 NMT1-like family IT971_21440 PF00171 Aldehyde dehydrogenase family IT971_21445 PF00355 Rieske [2Fe-2S] domain IT971_21450 PF00111 2Fe-2S iron-sulfur cluster binding domain IT971_21450 PF00970 Oxidoreductase FAD-binding domain IT971_21450 PF00175 Oxidoreductase NAD-binding domain IT971_21455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IT971_21455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IT971_21460 PF09084 NMT1/THI5 like IT971_21465 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IT971_21465 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IT971_21525 PF00004 ATPase family associated with various cellular activities (AAA) IT971_21565 PF00398 Ribosomal RNA adenine dimethylase IT971_21590 PF03466 LysR substrate binding domain IT971_21590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_21595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IT971_21610 PF01230 HIT domain IT971_21615 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IT971_21620 PF00977 Histidine biosynthesis protein IT971_21625 PF00977 Histidine biosynthesis protein IT971_21630 PF00583 Acetyltransferase (GNAT) family IT971_21635 PF00117 Glutamine amidotransferase class-I IT971_21645 PF00475 Imidazoleglycerol-phosphate dehydratase IT971_21650 PF01979 Amidohydrolase family IT971_21650 PF13382 Adenine deaminase C-terminal domain IT971_21655 PF00227 Proteasome subunit IT971_21660 PF10431 C-terminal, D2-small domain, of ClpB protein IT971_21660 PF07724 AAA domain (Cdc48 subfamily) IT971_21660 PF00004 ATPase family associated with various cellular activities (AAA) IT971_21670 PF00512 His Kinase A (phospho-acceptor) domain IT971_21670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IT971_21670 PF16736 Single Cache-like IT971_21670 PF00989 PAS fold IT971_21675 PF00881 Nitroreductase family IT971_21685 PF02441 Flavoprotein IT971_21685 PF04127 DNA / pantothenate metabolism flavoprotein IT971_21690 PF00692 dUTPase IT971_21695 PF02082 Transcriptional regulator IT971_21700 PF00291 Pyridoxal-phosphate dependent enzyme IT971_21705 PF00899 ThiF family IT971_21715 PF01810 LysE type translocator IT971_21720 PF03466 LysR substrate binding domain IT971_21720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IT971_21725 PF02308 MgtC family IT971_21730 PF00356 Bacterial regulatory proteins, lacI family IT971_21735 PF00232 Glycosyl hydrolase family 1 IT971_21740 PF01547 Bacterial extracellular solute-binding protein IT971_21745 PF00528 Binding-protein-dependent transport system inner membrane component IT971_21750 PF00528 Binding-protein-dependent transport system inner membrane component IT971_21755 PF00005 ABC transporter IT971_21755 PF08402 TOBE domain IT971_21765 PF00814 Glycoprotease family IT971_21780 PF01475 Ferric uptake regulator family IT971_21795 PF04055 Radical SAM superfamily IT971_21795 PF01938 TRAM domain IT971_21795 PF00919 Uncharacterized protein family UPF0004 IT971_21800 PF02562 PhoH-like protein IT971_21805 PF02130 Uncharacterized protein family UPF0054 IT971_21810 PF03471 Transporter associated domain IT971_21810 PF00571 CBS domain IT971_21815 PF00795 Carbon-nitrogen hydrolase IT971_21820 PF01381 Helix-turn-helix IT971_21825 PF02773 S-adenosylmethionine synthetase, C-terminal domain IT971_21825 PF00438 S-adenosylmethionine synthetase, N-terminal domain IT971_21825 PF02772 S-adenosylmethionine synthetase, central domain IT971_21830 PF02390 Putative methyltransferase IT971_21835 PF04542 Sigma-70 region 2 IT971_21835 PF08281 Sigma-70, region 4 IT971_21845 PF07715 TonB-dependent Receptor Plug Domain IT971_21845 PF00593 TonB dependent receptor IT971_21855 PF00664 ABC transporter transmembrane region IT971_21855 PF00005 ABC transporter IT971_21860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IT971_21860 PF00529 HlyD membrane-fusion protein of T1SS IT971_21865 PF01126 Heme oxygenase IT971_21870 PF02576 RimP N-terminal domain IT971_21870 PF17384 RimP C-terminal SH3 domain IT971_21875 PF00575 S1 RNA binding domain IT971_21875 PF13184 NusA-like KH domain IT971_21875 PF08529 NusA N-terminal domain IT971_21880 PF04296 Protein of unknown function (DUF448) IT971_21885 PF03144 Elongation factor Tu domain 2 IT971_21885 PF04760 Translation initiation factor IF-2, N-terminal region IT971_21885 PF11987 Translation-initiation factor 2 IT971_21885 PF08364 Bacterial translation initiation factor IF-2 associated region IT971_21885 PF00009 Elongation factor Tu GTP binding domain IT971_21890 PF02033 Ribosome-binding factor A IT971_21895 PF09157 Pseudouridine synthase II TruB, C-terminal IT971_21895 PF16198 tRNA pseudouridylate synthase B C-terminal domain IT971_21895 PF01509 TruB family pseudouridylate synthase (N terminal domain) IT971_21900 PF00312 Ribosomal protein S15 IT971_21905 PF00013 KH domain IT971_21905 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IT971_21905 PF01138 3' exoribonuclease family, domain 1 IT971_21905 PF00575 S1 RNA binding domain IT971_21905 PF03725 3' exoribonuclease family, domain 2 IT971_21920 PF02915 Rubrerythrin IT971_21930 PF00005 ABC transporter IT971_21935 PF01032 FecCD transport family IT971_21945 PF01209 ubiE/COQ5 methyltransferase family IT971_21955 PF00392 Bacterial regulatory proteins, gntR family IT971_21955 PF07729 FCD domain IT971_21965 PF07690 Major Facilitator Superfamily IT971_21975 PF04055 Radical SAM superfamily IT971_21975 PF06968 Biotin and Thiamin Synthesis associated domain IT971_21980 PF02632 BioY family IT971_21995 PF08379 Bacterial transglutaminase-like N-terminal region IT971_21995 PF01841 Transglutaminase-like superfamily IT971_22000 PF14403 Circularly permuted ATP-grasp type 2 IT971_22000 PF04168 A predicted alpha-helical domain with a conserved ER motif. IT971_22005 PF14403 Circularly permuted ATP-grasp type 2 IT971_22010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IT971_22015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IT971_22020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IT971_22025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IT971_22030 PF02570 Precorrin-8X methylmutase IT971_22035 PF01903 CbiX IT971_22040 PF03186 CobD/Cbib protein IT971_22045 PF01467 Cytidylyltransferase-like IT971_22045 PF00294 pfkB family carbohydrate kinase IT971_22050 PF13580 SIS domain IT971_22055 PF01370 NAD dependent epimerase/dehydratase family IT971_22065 PF02277 Phosphoribosyltransferase IT971_22070 PF02654 Cobalamin-5-phosphate synthase IT971_22085 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IT971_22090 PF07683 Cobalamin synthesis protein cobW C-terminal domain IT971_22090 PF02492 CobW/HypB/UreG, nucleotide-binding domain IT971_22095 PF02514 CobN/Magnesium Chelatase IT971_22110 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IT971_22115 PF07685 CobB/CobQ-like glutamine amidotransferase domain IT971_22120 PF00043 Glutathione S-transferase, C-terminal domain IT971_22120 PF13417 Glutathione S-transferase, N-terminal domain IT971_22145 PF04321 RmlD substrate binding domain IT971_22150 PF08269 Cache domain IT971_22150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_22155 PF02571 Precorrin-6x reductase CbiJ/CobK IT971_22160 PF01888 CbiD IT971_22165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IT971_22175 PF02630 SCO1/SenC IT971_22180 PF07685 CobB/CobQ-like glutamine amidotransferase domain IT971_22180 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IT971_22185 PF03692 Putative zinc- or iron-chelating domain IT971_22190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IT971_22190 PF08447 PAS fold IT971_22190 PF13426 PAS domain IT971_22195 PF00753 Metallo-beta-lactamase superfamily IT971_22205 PF00011 Hsp20/alpha crystallin family IT971_22210 PF00211 Adenylate and Guanylate cyclase catalytic domain IT971_22215 PF00117 Glutamine amidotransferase class-I IT971_22215 PF02540 NAD synthase IT971_22215 PF00958 GMP synthase C terminal domain IT971_22225 PF04143 Sulphur transport IT971_22250 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IT971_22255 PF02224 Cytidylate kinase IT971_22260 PF00575 S1 RNA binding domain IT971_22270 PF01343 Peptidase family S49 IT971_22275 PF00216 Bacterial DNA-binding protein IT971_22285 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IT971_22290 PF07690 Major Facilitator Superfamily IT971_22295 PF01925 Sulfite exporter TauE/SafE IT971_22300 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IT971_22300 PF06827 Zinc finger found in FPG and IleRS IT971_22300 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IT971_22305 PF00378 Enoyl-CoA hydratase/isomerase IT971_22310 PF01649 Ribosomal protein S20