locus-tag class description M9H61_00015 PF04143 Sulphur transport M9H61_00020 PF18284 DNA methylase N-terminal domain M9H61_00020 PF00145 C-5 cytosine-specific DNA methylase M9H61_00025 PF03852 DNA mismatch endonuclease Vsr M9H61_00035 PF00270 DEAD/DEAH box helicase M9H61_00035 PF00271 Helicase conserved C-terminal domain M9H61_00040 PF00313 'Cold-shock' DNA-binding domain M9H61_00045 PF00392 Bacterial regulatory proteins, gntR family M9H61_00045 PF07729 FCD domain M9H61_00055 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_00060 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_00065 PF00005 ABC transporter M9H61_00075 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M9H61_00085 PF00171 Aldehyde dehydrogenase family M9H61_00090 PF00005 ABC transporter M9H61_00095 PF12399 Branched-chain amino acid ATP-binding cassette transporter M9H61_00095 PF00005 ABC transporter M9H61_00105 PF02653 Branched-chain amino acid transport system / permease component M9H61_00125 PF07690 Major Facilitator Superfamily M9H61_00130 PF03073 TspO/MBR family M9H61_00135 PF02492 CobW/HypB/UreG, nucleotide-binding domain M9H61_00135 PF07683 Cobalamin synthesis protein cobW C-terminal domain M9H61_00140 PF00043 Glutathione S-transferase, C-terminal domain M9H61_00140 PF02798 Glutathione S-transferase, N-terminal domain M9H61_00145 PF00043 Glutathione S-transferase, C-terminal domain M9H61_00145 PF02798 Glutathione S-transferase, N-terminal domain M9H61_00155 PF07690 Major Facilitator Superfamily M9H61_00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_00160 PF03466 LysR substrate binding domain M9H61_00165 PF07690 Major Facilitator Superfamily M9H61_00165 PF00083 Sugar (and other) transporter M9H61_00170 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M9H61_00170 PF06481 COX Aromatic Rich Motif M9H61_00175 PF00115 Cytochrome C and Quinol oxidase polypeptide I M9H61_00180 PF00510 Cytochrome c oxidase subunit III M9H61_00185 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M9H61_00190 PF02104 SURF1 family M9H61_00200 PF17922 Tetracyclin repressor-like, C-terminal domain M9H61_00200 PF00440 Bacterial regulatory proteins, tetR family M9H61_00205 PF00186 Dihydrofolate reductase M9H61_00210 PF00303 Thymidylate synthase M9H61_00230 PF03547 Membrane transport protein M9H61_00235 PF05683 Fumarase C-terminus M9H61_00235 PF05681 Fumarate hydratase (Fumerase) M9H61_00250 PF05145 Transition state regulatory protein AbrB M9H61_00275 PF03707 Bacterial signalling protein N terminal repeat M9H61_00275 PF13188 PAS domain M9H61_00275 PF00563 EAL domain M9H61_00275 PF00990 Diguanylate cyclase, GGDEF domain M9H61_00285 PF00072 Response regulator receiver domain M9H61_00285 PF00486 Transcriptional regulatory protein, C terminal M9H61_00290 PF01740 STAS domain M9H61_00295 PF02954 Bacterial regulatory protein, Fis family M9H61_00295 PF00158 Sigma-54 interaction domain M9H61_00295 PF00072 Response regulator receiver domain M9H61_00300 PF00155 Aminotransferase class I and II M9H61_00325 PF13407 Periplasmic binding protein domain M9H61_00330 PF00563 EAL domain M9H61_00330 PF00990 Diguanylate cyclase, GGDEF domain M9H61_00330 PF03707 Bacterial signalling protein N terminal repeat M9H61_00335 PF01098 Cell cycle protein M9H61_00340 PF03717 Penicillin-binding Protein dimerisation domain M9H61_00340 PF00905 Penicillin binding protein transpeptidase domain M9H61_00350 PF04085 rod shape-determining protein MreC M9H61_00365 PF08502 LeuA allosteric (dimerisation) domain M9H61_00365 PF00682 HMGL-like M9H61_00375 PF01810 LysE type translocator M9H61_00390 PF00990 Diguanylate cyclase, GGDEF domain M9H61_00395 PF00313 'Cold-shock' DNA-binding domain M9H61_00400 PF01812 5-formyltetrahydrofolate cyclo-ligase family M9H61_00420 PF02541 Ppx/GppA phosphatase family M9H61_00425 PF01728 FtsJ-like methyltransferase M9H61_00435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_00435 PF02743 Cache domain M9H61_00435 PF00672 HAMP domain M9H61_00440 PF00571 CBS domain M9H61_00440 PF00478 IMP dehydrogenase / GMP reductase domain M9H61_00445 PF01029 NusB family M9H61_00445 PF01189 16S rRNA methyltransferase RsmB/F M9H61_00455 PF02540 NAD synthase M9H61_00455 PF00117 Glutamine amidotransferase class-I M9H61_00455 PF00958 GMP synthase C terminal domain M9H61_00475 PF13443 Cro/C1-type HTH DNA-binding domain M9H61_00490 PF00403 Heavy-metal-associated domain M9H61_00520 PF01322 Cytochrome C' M9H61_00525 PF00171 Aldehyde dehydrogenase family M9H61_00535 PF12697 Alpha/beta hydrolase family M9H61_00540 PF00293 NUDIX domain M9H61_00545 PF00106 short chain dehydrogenase M9H61_00555 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M9H61_00555 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M9H61_00560 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M9H61_00565 PF00920 Dehydratase family M9H61_00570 PF02685 Glucokinase M9H61_00575 PF01081 KDPG and KHG aldolase M9H61_00585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_00585 PF03466 LysR substrate binding domain M9H61_00595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_00595 PF03466 LysR substrate binding domain M9H61_00610 PF01297 Zinc-uptake complex component A periplasmic M9H61_00620 PF04293 SpoVR like protein M9H61_00625 PF04285 Protein of unknown function (DUF444) M9H61_00630 PF08298 PrkA AAA domain M9H61_00630 PF06798 PrkA serine protein kinase C-terminal domain M9H61_00635 PF11127 Protein of unknown function (DUF2892) M9H61_00635 PF00581 Rhodanese-like domain M9H61_00640 PF08361 MAATS-type transcriptional repressor, C-terminal region M9H61_00640 PF00440 Bacterial regulatory proteins, tetR family M9H61_00645 PF01042 Endoribonuclease L-PSP M9H61_00660 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_00670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_00695 PF08032 RNA 2'-O ribose methyltransferase substrate binding M9H61_00695 PF00588 SpoU rRNA Methylase family M9H61_00710 PF03143 Elongation factor Tu C-terminal domain M9H61_00710 PF00009 Elongation factor Tu GTP binding domain M9H61_00710 PF03144 Elongation factor Tu domain 2 M9H61_00720 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M9H61_00725 PF00467 KOW motif M9H61_00725 PF02357 Transcription termination factor nusG M9H61_00730 PF03946 Ribosomal protein L11, N-terminal domain M9H61_00730 PF00298 Ribosomal protein L11, RNA binding domain M9H61_00735 PF00687 Ribosomal protein L1p/L10e family M9H61_00740 PF00466 Ribosomal protein L10 M9H61_00745 PF00542 Ribosomal protein L7/L12 C-terminal domain M9H61_00745 PF16320 Ribosomal protein L7/L12 dimerisation domain M9H61_00750 PF04563 RNA polymerase beta subunit M9H61_00750 PF04561 RNA polymerase Rpb2, domain 2 M9H61_00750 PF04565 RNA polymerase Rpb2, domain 3 M9H61_00750 PF10385 RNA polymerase beta subunit external 1 domain M9H61_00750 PF00562 RNA polymerase Rpb2, domain 6 M9H61_00750 PF04560 RNA polymerase Rpb2, domain 7 M9H61_00755 PF00623 RNA polymerase Rpb1, domain 2 M9H61_00755 PF04997 RNA polymerase Rpb1, domain 1 M9H61_00755 PF04998 RNA polymerase Rpb1, domain 5 M9H61_00755 PF05000 RNA polymerase Rpb1, domain 4 M9H61_00755 PF04983 RNA polymerase Rpb1, domain 3 M9H61_00760 PF00164 Ribosomal protein S12/S23 M9H61_00765 PF00177 Ribosomal protein S7p/S5e M9H61_00770 PF00679 Elongation factor G C-terminus M9H61_00770 PF14492 Elongation Factor G, domain II M9H61_00770 PF03764 Elongation factor G, domain IV M9H61_00770 PF00009 Elongation factor Tu GTP binding domain M9H61_00770 PF03144 Elongation factor Tu domain 2 M9H61_00775 PF03144 Elongation factor Tu domain 2 M9H61_00775 PF00009 Elongation factor Tu GTP binding domain M9H61_00775 PF03143 Elongation factor Tu C-terminal domain M9H61_00780 PF00338 Ribosomal protein S10p/S20e M9H61_00785 PF00297 Ribosomal protein L3 M9H61_00790 PF00573 Ribosomal protein L4/L1 family M9H61_00795 PF00276 Ribosomal protein L23 M9H61_00800 PF00181 Ribosomal Proteins L2, RNA binding domain M9H61_00800 PF03947 Ribosomal Proteins L2, C-terminal domain M9H61_00805 PF00203 Ribosomal protein S19 M9H61_00810 PF00237 Ribosomal protein L22p/L17e M9H61_00815 PF07650 KH domain M9H61_00815 PF00189 Ribosomal protein S3, C-terminal domain M9H61_00820 PF00252 Ribosomal protein L16p/L10e M9H61_00825 PF00831 Ribosomal L29 protein M9H61_00830 PF00366 Ribosomal protein S17 M9H61_00835 PF00238 Ribosomal protein L14p/L23e M9H61_00840 PF00467 KOW motif M9H61_00840 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M9H61_00845 PF00281 Ribosomal protein L5 M9H61_00845 PF00673 ribosomal L5P family C-terminus M9H61_00850 PF00253 Ribosomal protein S14p/S29e M9H61_00855 PF00410 Ribosomal protein S8 M9H61_00860 PF00347 Ribosomal protein L6 M9H61_00865 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M9H61_00870 PF00333 Ribosomal protein S5, N-terminal domain M9H61_00870 PF03719 Ribosomal protein S5, C-terminal domain M9H61_00875 PF00327 Ribosomal protein L30p/L7e M9H61_00880 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M9H61_00885 PF00344 SecY translocase M9H61_00890 PF05191 Adenylate kinase, active site lid M9H61_00895 PF00416 Ribosomal protein S13/S18 M9H61_00900 PF00411 Ribosomal protein S11 M9H61_00905 PF01000 RNA polymerase Rpb3/RpoA insert domain M9H61_00905 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M9H61_00905 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M9H61_00910 PF01196 Ribosomal protein L17 M9H61_00915 PF17820 PDZ domain M9H61_00915 PF13180 PDZ domain M9H61_00920 PF12002 MgsA AAA+ ATPase C terminal M9H61_00920 PF16193 AAA C-terminal domain M9H61_00920 PF00004 ATPase family associated with various cellular activities (AAA) M9H61_00925 PF02525 Flavodoxin-like fold M9H61_00935 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M9H61_00940 PF00849 RNA pseudouridylate synthase M9H61_00940 PF01479 S4 domain M9H61_00950 PF13419 Haloacid dehalogenase-like hydrolase M9H61_00965 PF01738 Dienelactone hydrolase family M9H61_00970 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_00975 PF00005 ABC transporter M9H61_00995 PF01039 Carboxyl transferase domain M9H61_01000 PF18140 Propionyl-coenzyme A carboxylase BT domain M9H61_01000 PF02785 Biotin carboxylase C-terminal domain M9H61_01000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M9H61_01000 PF00364 Biotin-requiring enzyme M9H61_01000 PF00289 Biotin carboxylase, N-terminal domain M9H61_01015 PF00708 Acylphosphatase M9H61_01025 PF01565 FAD binding domain M9H61_01025 PF02913 FAD linked oxidases, C-terminal domain M9H61_01030 PF03481 Putative GTP-binding controlling metal-binding M9H61_01030 PF01300 Telomere recombination M9H61_01035 PF00459 Inositol monophosphatase family M9H61_01045 PF01875 Memo-like protein M9H61_01065 PF13673 Acetyltransferase (GNAT) domain M9H61_01065 PF00583 Acetyltransferase (GNAT) family M9H61_01075 PF00883 Cytosol aminopeptidase family, catalytic domain M9H61_01075 PF02789 Cytosol aminopeptidase family, N-terminal domain M9H61_01105 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_01110 PF03180 NLPA lipoprotein M9H61_01115 PF01810 LysE type translocator M9H61_01120 PF03707 Bacterial signalling protein N terminal repeat M9H61_01120 PF00990 Diguanylate cyclase, GGDEF domain M9H61_01120 PF00563 EAL domain M9H61_01130 PF00005 ABC transporter M9H61_01130 PF12848 ABC transporter M9H61_01135 PF00334 Nucleoside diphosphate kinase M9H61_01160 PF00551 Formyl transferase M9H61_01165 PF00586 AIR synthase related protein, N-terminal domain M9H61_01165 PF02769 AIR synthase related protein, C-terminal domain M9H61_01175 PF01594 AI-2E family transporter M9H61_01180 PF00308 Bacterial dnaA protein M9H61_01180 PF08299 Bacterial dnaA protein helix-turn-helix M9H61_01180 PF11638 DnaA N-terminal domain M9H61_01185 PF18030 RimK PreATP-grasp domain M9H61_01185 PF08443 RimK-like ATP-grasp domain M9H61_01190 PF18030 RimK PreATP-grasp domain M9H61_01190 PF08443 RimK-like ATP-grasp domain M9H61_01200 PF01612 3'-5' exonuclease M9H61_01200 PF00570 HRDC domain M9H61_01205 PF00440 Bacterial regulatory proteins, tetR family M9H61_01220 PF05368 NmrA-like family M9H61_01225 PF03466 LysR substrate binding domain M9H61_01225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_01230 PF01370 NAD dependent epimerase/dehydratase family M9H61_01235 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase M9H61_01240 PF08421 Putative zinc binding domain M9H61_01240 PF08484 C-methyltransferase C-terminal domain M9H61_01245 PF16363 GDP-mannose 4,6 dehydratase M9H61_01250 PF00483 Nucleotidyl transferase M9H61_01265 PF02541 Ppx/GppA phosphatase family M9H61_01270 PF02503 Polyphosphate kinase middle domain M9H61_01270 PF13089 Polyphosphate kinase N-terminal domain M9H61_01270 PF17941 Polyphosphate kinase C-terminal domain 1 M9H61_01270 PF13090 Polyphosphate kinase C-terminal domain 2 M9H61_01280 PF00152 tRNA synthetases class II (D, K and N) M9H61_01280 PF02938 GAD domain M9H61_01280 PF01336 OB-fold nucleic acid binding domain M9H61_01295 PF01022 Bacterial regulatory protein, arsR family M9H61_01300 PF00850 Histone deacetylase domain M9H61_01305 PF02609 Exonuclease VII small subunit M9H61_01310 PF00348 Polyprenyl synthetase M9H61_01320 PF02779 Transketolase, pyrimidine binding domain M9H61_01320 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M9H61_01320 PF02780 Transketolase, C-terminal domain M9H61_01335 PF00501 AMP-binding enzyme M9H61_01335 PF13193 AMP-binding enzyme C-terminal domain M9H61_01345 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_01355 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_01365 PF07729 FCD domain M9H61_01365 PF00392 Bacterial regulatory proteins, gntR family M9H61_01370 PF01479 S4 domain M9H61_01370 PF01728 FtsJ-like methyltransferase M9H61_01400 PF01264 Chorismate synthase M9H61_01410 PF03631 Virulence factor BrkB M9H61_01415 PF00106 short chain dehydrogenase M9H61_01420 PF00924 Mechanosensitive ion channel M9H61_01425 PF00226 DnaJ domain M9H61_01425 PF01556 DnaJ C terminal domain M9H61_01425 PF00684 DnaJ central domain M9H61_01430 PF16998 17 kDa outer membrane surface antigen M9H61_01430 PF05433 Glycine zipper 2TM domain M9H61_01435 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M9H61_01435 PF01243 Pyridoxamine 5'-phosphate oxidase M9H61_01440 PF01022 Bacterial regulatory protein, arsR family M9H61_01455 PF02586 SOS response associated peptidase (SRAP) M9H61_01465 PF13508 Acetyltransferase (GNAT) domain M9H61_01475 PF00155 Aminotransferase class I and II M9H61_01480 PF00202 Aminotransferase class-III M9H61_01495 PF00156 Phosphoribosyl transferase domain M9H61_01505 PF01740 STAS domain M9H61_01505 PF00916 Sulfate permease family M9H61_01510 PF00378 Enoyl-CoA hydratase/isomerase M9H61_01520 PF07690 Major Facilitator Superfamily M9H61_01525 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_01530 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component M9H61_01535 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_01540 PF02954 Bacterial regulatory protein, Fis family M9H61_01540 PF00158 Sigma-54 interaction domain M9H61_01540 PF00072 Response regulator receiver domain M9H61_01545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_01545 PF00512 His Kinase A (phospho-acceptor) domain M9H61_01550 PF06258 Mitochondrial fission ELM1 M9H61_01560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_01560 PF03466 LysR substrate binding domain M9H61_01565 PF07690 Major Facilitator Superfamily M9H61_01570 PF00248 Aldo/keto reductase family M9H61_01575 PF04055 Radical SAM superfamily M9H61_01585 PF07992 Pyridine nucleotide-disulphide oxidoreductase M9H61_01590 PF02525 Flavodoxin-like fold M9H61_01595 PF03466 LysR substrate binding domain M9H61_01595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_01600 PF01261 Xylose isomerase-like TIM barrel M9H61_01605 PF13660 Domain of unknown function (DUF4147) M9H61_01605 PF05161 MOFRL family M9H61_01610 PF07729 FCD domain M9H61_01610 PF00392 Bacterial regulatory proteins, gntR family M9H61_01620 PF04107 Glutamate-cysteine ligase family 2(GCS2) M9H61_01625 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) M9H61_01650 PF00753 Metallo-beta-lactamase superfamily M9H61_01655 PF00916 Sulfate permease family M9H61_01655 PF01740 STAS domain M9H61_01660 PF03594 Benzoate membrane transport protein M9H61_01680 PF00459 Inositol monophosphatase family M9H61_01685 PF01132 Elongation factor P (EF-P) OB domain M9H61_01685 PF08207 Elongation factor P (EF-P) KOW-like domain M9H61_01685 PF09285 Elongation factor P, C-terminal M9H61_01690 PF02581 Thiamine monophosphate synthase M9H61_01705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M9H61_01705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M9H61_01710 PF00456 Transketolase, thiamine diphosphate binding domain M9H61_01710 PF02780 Transketolase, C-terminal domain M9H61_01710 PF02779 Transketolase, pyrimidine binding domain M9H61_01725 PF05164 Cell division protein ZapA M9H61_01735 PF13277 YmdB-like protein M9H61_01740 PF12729 Four helix bundle sensory module for signal transduction M9H61_01740 PF00672 HAMP domain M9H61_01740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_01745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_01745 PF16591 Helical bimodular sensor domain M9H61_01745 PF00672 HAMP domain M9H61_01750 PF01709 Transcriptional regulator M9H61_01755 PF02075 Crossover junction endodeoxyribonuclease RuvC M9H61_01760 PF07499 RuvA, C-terminal domain M9H61_01760 PF01330 RuvA N terminal domain M9H61_01765 PF17864 RuvB AAA lid domain M9H61_01765 PF05491 RuvB C-terminal winged helix domain M9H61_01765 PF05496 Holliday junction DNA helicase RuvB P-loop domain M9H61_01770 PF03061 Thioesterase superfamily M9H61_01775 PF01618 MotA/TolQ/ExbB proton channel family M9H61_01780 PF02472 Biopolymer transport protein ExbD/TolR M9H61_01790 PF04052 TolB amino-terminal domain M9H61_01790 PF07676 WD40-like Beta Propeller Repeat M9H61_01795 PF00691 OmpA family M9H61_01805 PF01171 PP-loop family M9H61_01810 PF01434 Peptidase family M41 M9H61_01810 PF00004 ATPase family associated with various cellular activities (AAA) M9H61_01810 PF17862 AAA+ lid domain M9H61_01810 PF06480 FtsH Extracellular M9H61_01815 PF00809 Pterin binding enzyme M9H61_01820 PF00072 Response regulator receiver domain M9H61_01820 PF00486 Transcriptional regulatory protein, C terminal M9H61_01825 PF00512 His Kinase A (phospho-acceptor) domain M9H61_01825 PF00989 PAS fold M9H61_01825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_01830 PF13493 Domain of unknown function (DUF4118) M9H61_01830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_01830 PF00512 His Kinase A (phospho-acceptor) domain M9H61_01830 PF02702 Osmosensitive K+ channel His kinase sensor domain M9H61_01830 PF13492 GAF domain M9H61_01835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M9H61_01835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M9H61_01835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M9H61_01835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M9H61_01840 PF08543 Phosphomethylpyrimidine kinase M9H61_01840 PF02581 Thiamine monophosphate synthase M9H61_01870 PF00920 Dehydratase family M9H61_01875 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M9H61_01875 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M9H61_01880 PF01037 Lrp/AsnC ligand binding domain M9H61_01900 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_01905 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_01910 PF00005 ABC transporter M9H61_01910 PF08402 TOBE domain M9H61_01915 PF13416 Bacterial extracellular solute-binding protein M9H61_01920 PF00120 Glutamine synthetase, catalytic domain M9H61_01930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M9H61_01930 PF13378 Enolase C-terminal domain-like M9H61_01935 PF17151 Periplasmic sensor domain M9H61_01935 PF00990 Diguanylate cyclase, GGDEF domain M9H61_01975 PF00005 ABC transporter M9H61_01980 PF13533 Biotin-lipoyl like M9H61_01985 PF01850 PIN domain M9H61_01990 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin M9H61_02000 PF00202 Aminotransferase class-III M9H61_02005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_02005 PF03466 LysR substrate binding domain M9H61_02015 PF02913 FAD linked oxidases, C-terminal domain M9H61_02015 PF01565 FAD binding domain M9H61_02015 PF13183 4Fe-4S dicluster domain M9H61_02020 PF03466 LysR substrate binding domain M9H61_02020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_02045 PF12464 Maltose acetyltransferase M9H61_02045 PF14602 Hexapeptide repeat of succinyl-transferase M9H61_02060 PF00072 Response regulator receiver domain M9H61_02060 PF00486 Transcriptional regulatory protein, C terminal M9H61_02065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_02065 PF00512 His Kinase A (phospho-acceptor) domain M9H61_02070 PF01494 FAD binding domain M9H61_02075 PF00893 Small Multidrug Resistance protein M9H61_02095 PF08019 Phosphoethanolamine transferase EptA/EptB M9H61_02095 PF00884 Sulfatase M9H61_02105 PF01894 Uncharacterised protein family UPF0047 M9H61_02120 PF07732 Multicopper oxidase M9H61_02120 PF07731 Multicopper oxidase M9H61_02120 PF00394 Multicopper oxidase M9H61_02125 PF05275 Copper resistance protein B precursor (CopB) M9H61_02155 PF02867 Ribonucleotide reductase, barrel domain M9H61_02155 PF08471 Class II vitamin B12-dependent ribonucleotide reductase M9H61_02160 PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 M9H61_02175 PF09923 Uncharacterized protein conserved in bacteria (DUF2155) M9H61_02185 PF04264 YceI-like domain M9H61_02190 PF01292 Prokaryotic cytochrome b561 M9H61_02205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_02205 PF00672 HAMP domain M9H61_02205 PF17200 Single Cache domain 2 M9H61_02210 PF02230 Phospholipase/Carboxylesterase M9H61_02215 PF01810 LysE type translocator M9H61_02220 PF01554 MatE M9H61_02225 PF01037 Lrp/AsnC ligand binding domain M9H61_02235 PF02082 Transcriptional regulator M9H61_02240 PF00271 Helicase conserved C-terminal domain M9H61_02240 PF00270 DEAD/DEAH box helicase M9H61_02250 PF12697 Alpha/beta hydrolase family M9H61_02260 PF01872 RibD C-terminal domain M9H61_02270 PF00986 DNA gyrase B subunit, carboxyl terminus M9H61_02270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_02270 PF01751 Toprim domain M9H61_02270 PF00204 DNA gyrase B M9H61_02275 PF03061 Thioesterase superfamily M9H61_02285 PF00005 ABC transporter M9H61_02285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M9H61_02290 PF00005 ABC transporter M9H61_02290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M9H61_02295 PF12911 N-terminal TM domain of oligopeptide transport permease C M9H61_02295 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_02300 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_02305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M9H61_02330 PF00072 Response regulator receiver domain M9H61_02335 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M9H61_02340 PF02887 Pyruvate kinase, alpha/beta domain M9H61_02340 PF00224 Pyruvate kinase, barrel domain M9H61_02360 PF01965 DJ-1/PfpI family M9H61_02365 PF00924 Mechanosensitive ion channel M9H61_02365 PF05552 Conserved TM helix M9H61_02370 PF00691 OmpA family M9H61_02380 PF13380 CoA binding domain M9H61_02385 PF01794 Ferric reductase like transmembrane component M9H61_02390 PF01810 LysE type translocator M9H61_02395 PF00378 Enoyl-CoA hydratase/isomerase M9H61_02415 PF00572 Ribosomal protein L13 M9H61_02420 PF00380 Ribosomal protein S9/S16 M9H61_02425 PF01070 FMN-dependent dehydrogenase M9H61_02440 PF01118 Semialdehyde dehydrogenase, NAD binding domain M9H61_02440 PF02774 Semialdehyde dehydrogenase, dimerisation domain M9H61_02445 PF00155 Aminotransferase class I and II M9H61_02445 PF00392 Bacterial regulatory proteins, gntR family M9H61_02450 PF00892 EamA-like transporter family M9H61_02460 PF00132 Bacterial transferase hexapeptide (six repeats) M9H61_02475 PF03150 Di-haem cytochrome c peroxidase M9H61_02480 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M9H61_02480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M9H61_02485 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus M9H61_02495 PF00155 Aminotransferase class I and II M9H61_02500 PF03447 Homoserine dehydrogenase, NAD binding domain M9H61_02500 PF01842 ACT domain M9H61_02500 PF00742 Homoserine dehydrogenase M9H61_02505 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded M9H61_02515 PF00012 Hsp70 protein M9H61_02535 PF17768 RecJ OB domain M9H61_02535 PF02272 DHHA1 domain M9H61_02535 PF01368 DHH family M9H61_02555 PF07690 Major Facilitator Superfamily M9H61_02575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_02575 PF00512 His Kinase A (phospho-acceptor) domain M9H61_02575 PF09308 LuxQ, periplasmic M9H61_02575 PF00072 Response regulator receiver domain M9H61_02580 PF11799 impB/mucB/samB family C-terminal domain M9H61_02580 PF00817 impB/mucB/samB family M9H61_02600 PF12706 Beta-lactamase superfamily domain M9H61_02600 PF00753 Metallo-beta-lactamase superfamily M9H61_02605 PF00691 OmpA family M9H61_02605 PF13677 Membrane MotB of proton-channel complex MotA/MotB M9H61_02610 PF01618 MotA/TolQ/ExbB proton channel family M9H61_02620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_02620 PF00672 HAMP domain M9H61_02635 PF00156 Phosphoribosyl transferase domain M9H61_02655 PF01053 Cys/Met metabolism PLP-dependent enzyme M9H61_02660 PF01266 FAD dependent oxidoreductase M9H61_02670 PF09084 NMT1/THI5 like M9H61_02675 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_02680 PF00005 ABC transporter M9H61_02685 PF00850 Histone deacetylase domain M9H61_02715 PF01497 Periplasmic binding protein M9H61_02720 PF01032 FecCD transport family M9H61_02725 PF01032 FecCD transport family M9H61_02730 PF00005 ABC transporter M9H61_02735 PF00593 TonB dependent receptor M9H61_02735 PF07715 TonB-dependent Receptor Plug Domain M9H61_02750 PF00248 Aldo/keto reductase family M9H61_02755 PF02492 CobW/HypB/UreG, nucleotide-binding domain M9H61_02755 PF07683 Cobalamin synthesis protein cobW C-terminal domain M9H61_02760 PF01502 Phosphoribosyl-AMP cyclohydrolase M9H61_02770 PF00005 ABC transporter M9H61_02775 PF00950 ABC 3 transport family M9H61_02780 PF01053 Cys/Met metabolism PLP-dependent enzyme M9H61_02785 PF00291 Pyridoxal-phosphate dependent enzyme M9H61_02785 PF13291 ACT domain M9H61_02790 PF01783 Ribosomal L32p protein family M9H61_02805 PF00581 Rhodanese-like domain M9H61_02810 PF02272 DHHA1 domain M9H61_02810 PF01411 tRNA synthetases class II (A) M9H61_02810 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M9H61_02825 PF00579 tRNA synthetases class I (W and Y) M9H61_02850 PF02652 L-lactate permease M9H61_02855 PF00296 Luciferase-like monooxygenase M9H61_02860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_02860 PF03466 LysR substrate binding domain M9H61_02865 PF07690 Major Facilitator Superfamily M9H61_02870 PF00291 Pyridoxal-phosphate dependent enzyme M9H61_02875 PF00293 NUDIX domain M9H61_02880 PF17151 Periplasmic sensor domain M9H61_02880 PF00990 Diguanylate cyclase, GGDEF domain M9H61_02890 PF07687 Peptidase dimerisation domain M9H61_02890 PF01546 Peptidase family M20/M25/M40 M9H61_02895 PF00684 DnaJ central domain M9H61_02895 PF01556 DnaJ C terminal domain M9H61_02895 PF00226 DnaJ domain M9H61_02905 PF00444 Ribosomal protein L36 M9H61_02910 PF02743 Cache domain M9H61_02910 PF00211 Adenylate and Guanylate cyclase catalytic domain M9H61_02910 PF00672 HAMP domain M9H61_02920 PF03435 Saccharopine dehydrogenase NADP binding domain M9H61_02920 PF16653 Saccharopine dehydrogenase C-terminal domain M9H61_02940 PF01925 Sulfite exporter TauE/SafE M9H61_02945 PF01206 Sulfurtransferase TusA M9H61_02950 PF13673 Acetyltransferase (GNAT) domain M9H61_02960 PF00990 Diguanylate cyclase, GGDEF domain M9H61_02960 PF00563 EAL domain M9H61_02960 PF03707 Bacterial signalling protein N terminal repeat M9H61_02965 PF00563 EAL domain M9H61_02965 PF00990 Diguanylate cyclase, GGDEF domain M9H61_02965 PF13426 PAS domain M9H61_02970 PF00990 Diguanylate cyclase, GGDEF domain M9H61_02985 PF13654 AAA domain M9H61_02985 PF05362 Lon protease (S16) C-terminal proteolytic domain M9H61_02990 PF00155 Aminotransferase class I and II M9H61_02990 PF00392 Bacterial regulatory proteins, gntR family M9H61_03000 PF00291 Pyridoxal-phosphate dependent enzyme M9H61_03000 PF13291 ACT domain M9H61_03010 PF02567 Phenazine biosynthesis-like protein M9H61_03015 PF02080 TrkA-C domain M9H61_03015 PF03600 Citrate transporter M9H61_03020 PF00266 Aminotransferase class-V M9H61_03025 PF13393 Histidyl-tRNA synthetase M9H61_03030 PF00709 Adenylosuccinate synthetase M9H61_03045 PF04542 Sigma-70 region 2 M9H61_03045 PF00140 Sigma-70 factor, region 1.2 M9H61_03045 PF04545 Sigma-70, region 4 M9H61_03050 PF00849 RNA pseudouridylate synthase M9H61_03065 PF01966 HD domain M9H61_03065 PF11871 Domain of unknown function (DUF3391) M9H61_03070 PF00571 CBS domain M9H61_03070 PF00005 ABC transporter M9H61_03075 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_03080 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M9H61_03085 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_03090 PF00005 ABC transporter M9H61_03090 PF00571 CBS domain M9H61_03120 PF13416 Bacterial extracellular solute-binding protein M9H61_03125 PF13416 Bacterial extracellular solute-binding protein M9H61_03130 PF13416 Bacterial extracellular solute-binding protein M9H61_03140 PF00994 Probable molybdopterin binding domain M9H61_03140 PF03454 MoeA C-terminal region (domain IV) M9H61_03140 PF03453 MoeA N-terminal region (domain I and II) M9H61_03145 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M9H61_03145 PF10996 Beta-Casp domain M9H61_03145 PF00753 Metallo-beta-lactamase superfamily M9H61_03155 PF00534 Glycosyl transferases group 1 M9H61_03160 PF13439 Glycosyltransferase Family 4 M9H61_03165 PF00300 Histidine phosphatase superfamily (branch 1) M9H61_03185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M9H61_03185 PF00005 ABC transporter M9H61_03190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M9H61_03195 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_03200 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_03200 PF12911 N-terminal TM domain of oligopeptide transport permease C M9H61_03210 PF12832 MFS_1 like family M9H61_03215 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M9H61_03215 PF01266 FAD dependent oxidoreductase M9H61_03220 PF01207 Dihydrouridine synthase (Dus) M9H61_03225 PF03960 ArsC family M9H61_03230 PF13419 Haloacid dehalogenase-like hydrolase M9H61_03250 PF04241 Protein of unknown function (DUF423) M9H61_03255 PF00471 Ribosomal protein L33 M9H61_03260 PF13180 PDZ domain M9H61_03260 PF03572 Peptidase family S41 M9H61_03275 PF08461 Ribonuclease R winged-helix domain M9H61_03275 PF17876 Cold shock domain M9H61_03275 PF08206 Ribonuclease B OB domain M9H61_03275 PF00773 RNB domain M9H61_03275 PF00575 S1 RNA binding domain M9H61_03280 PF01131 DNA topoisomerase M9H61_03280 PF01751 Toprim domain M9H61_03280 PF13368 Topoisomerase C-terminal repeat M9H61_03280 PF01396 Topoisomerase DNA binding C4 zinc finger M9H61_03285 PF17782 DprA winged helix domain M9H61_03285 PF02481 DNA recombination-mediator protein A M9H61_03290 PF02660 Glycerol-3-phosphate acyltransferase M9H61_03295 PF01979 Amidohydrolase family M9H61_03300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M9H61_03300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M9H61_03315 PF03652 Holliday junction resolvase M9H61_03320 PF02686 Glu-tRNAGln amidotransferase C subunit M9H61_03325 PF01425 Amidase M9H61_03330 PF02637 GatB domain M9H61_03330 PF02934 GatB/GatE catalytic domain M9H61_03340 PF01965 DJ-1/PfpI family M9H61_03345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_03345 PF03466 LysR substrate binding domain M9H61_03350 PF00265 Thymidine kinase M9H61_03355 PF01810 LysE type translocator M9H61_03360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_03360 PF03466 LysR substrate binding domain M9H61_03365 PF04403 Paraquat-inducible protein A M9H61_03370 PF02470 MlaD protein M9H61_03385 PF12833 Helix-turn-helix domain M9H61_03385 PF01965 DJ-1/PfpI family M9H61_03390 PF07690 Major Facilitator Superfamily M9H61_03415 PF00294 pfkB family carbohydrate kinase M9H61_03420 PF02872 5'-nucleotidase, C-terminal domain M9H61_03420 PF00149 Calcineurin-like phosphoesterase M9H61_03425 PF02608 ABC transporter substrate-binding protein PnrA-like M9H61_03430 PF00005 ABC transporter M9H61_03440 PF02653 Branched-chain amino acid transport system / permease component M9H61_03445 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M9H61_03450 PF01048 Phosphorylase superfamily M9H61_03455 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain M9H61_03455 PF02885 Glycosyl transferase family, helical bundle domain M9H61_03455 PF00591 Glycosyl transferase family, a/b domain M9H61_03460 PF00732 GMC oxidoreductase M9H61_03460 PF05199 GMC oxidoreductase M9H61_03470 PF02653 Branched-chain amino acid transport system / permease component M9H61_03475 PF00005 ABC transporter M9H61_03480 PF12399 Branched-chain amino acid ATP-binding cassette transporter M9H61_03480 PF00005 ABC transporter M9H61_03495 PF00455 DeoR C terminal sensor domain M9H61_03495 PF08220 DeoR-like helix-turn-helix domain M9H61_03500 PF00005 ABC transporter M9H61_03505 PF00005 ABC transporter M9H61_03510 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_03515 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_03520 PF00497 Bacterial extracellular solute-binding proteins, family 3 M9H61_03525 PF13193 AMP-binding enzyme C-terminal domain M9H61_03525 PF00501 AMP-binding enzyme M9H61_03530 PF00994 Probable molybdopterin binding domain M9H61_03545 PF01614 Bacterial transcriptional regulator M9H61_03545 PF09339 IclR helix-turn-helix domain M9H61_03550 PF00990 Diguanylate cyclase, GGDEF domain M9H61_03550 PF03707 Bacterial signalling protein N terminal repeat M9H61_03550 PF00563 EAL domain M9H61_03555 PF01625 Peptide methionine sulfoxide reductase M9H61_03585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M9H61_03585 PF02824 TGS domain M9H61_03585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M9H61_03585 PF03129 Anticodon binding domain M9H61_03590 PF07690 Major Facilitator Superfamily M9H61_03615 PF05698 Bacterial trigger factor protein (TF) C-terminus M9H61_03620 PF03883 Peroxide stress protein YaaA M9H61_03625 PF02885 Glycosyl transferase family, helical bundle domain M9H61_03625 PF00591 Glycosyl transferase family, a/b domain M9H61_03640 PF01891 Cobalt uptake substrate-specific transmembrane region M9H61_03655 PF00005 ABC transporter M9H61_03685 PF13607 Succinyl-CoA ligase like flavodoxin domain M9H61_03685 PF13380 CoA binding domain M9H61_03685 PF00583 Acetyltransferase (GNAT) family M9H61_03710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_03710 PF08447 PAS fold M9H61_03720 PF00581 Rhodanese-like domain M9H61_03725 PF02321 Outer membrane efflux protein M9H61_03735 PF00133 tRNA synthetases class I (I, L, M and V) M9H61_03735 PF10458 Valyl tRNA synthetase tRNA binding arm M9H61_03735 PF08264 Anticodon-binding domain of tRNA M9H61_03740 PF04715 Anthranilate synthase component I, N terminal region M9H61_03740 PF00425 chorismate binding enzyme M9H61_03745 PF00117 Glutamine amidotransferase class-I M9H61_03750 PF01063 Amino-transferase class IV M9H61_03760 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M9H61_03775 PF01521 Iron-sulphur cluster biosynthesis M9H61_03780 PF05746 DALR anticodon binding domain M9H61_03780 PF00750 tRNA synthetases class I (R) M9H61_03780 PF03485 Arginyl tRNA synthetase N terminal domain M9H61_03790 PF00933 Glycosyl hydrolase family 3 N terminal domain M9H61_03795 PF02163 Peptidase family M50 M9H61_03800 PF02616 Segregation and condensation protein ScpA M9H61_03805 PF04079 Segregation and condensation complex subunit ScpB M9H61_03810 PF00005 ABC transporter M9H61_03810 PF08402 TOBE domain M9H61_03815 PF02416 mttA/Hcf106 family M9H61_03820 PF02416 mttA/Hcf106 family M9H61_03830 PF02403 Seryl-tRNA synthetase N-terminal domain M9H61_03830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M9H61_03835 PF01975 Survival protein SurE M9H61_03845 PF01476 LysM domain M9H61_03845 PF01551 Peptidase family M23 M9H61_03855 PF02699 Preprotein translocase subunit M9H61_03860 PF02355 Protein export membrane protein M9H61_03865 PF07549 SecD/SecF GG Motif M9H61_03865 PF02355 Protein export membrane protein M9H61_03880 PF00924 Mechanosensitive ion channel M9H61_03895 PF01134 Glucose inhibited division protein A M9H61_03905 PF17760 UvrA interaction domain M9H61_03905 PF17755 UvrA DNA-binding domain M9H61_03910 PF01116 Fructose-bisphosphate aldolase class-II M9H61_03920 PF01979 Amidohydrolase family M9H61_03925 PF01380 SIS domain M9H61_03930 PF00392 Bacterial regulatory proteins, gntR family M9H61_03930 PF07702 UTRA domain M9H61_03935 PF01869 BadF/BadG/BcrA/BcrD ATPase family M9H61_03940 PF13580 SIS domain M9H61_03945 PF01547 Bacterial extracellular solute-binding protein M9H61_03950 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_03955 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_03960 PF17912 MalK OB fold domain M9H61_03960 PF00005 ABC transporter M9H61_03960 PF03459 TOBE domain M9H61_03970 PF13416 Bacterial extracellular solute-binding protein M9H61_03975 PF00005 ABC transporter M9H61_03975 PF08402 TOBE domain M9H61_03980 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_03985 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_03990 PF13416 Bacterial extracellular solute-binding protein M9H61_03995 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_04000 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_04005 PF00005 ABC transporter M9H61_04005 PF17912 MalK OB fold domain M9H61_04010 PF13185 GAF domain M9H61_04015 PF00436 Single-strand binding protein family M9H61_04020 PF00293 NUDIX domain M9H61_04025 PF02810 SEC-C motif M9H61_04030 PF04542 Sigma-70 region 2 M9H61_04030 PF00140 Sigma-70 factor, region 1.2 M9H61_04030 PF04545 Sigma-70, region 4 M9H61_04035 PF00293 NUDIX domain M9H61_04035 PF09297 NADH pyrophosphatase zinc ribbon domain M9H61_04050 PF00270 DEAD/DEAH box helicase M9H61_04050 PF17191 RecG wedge domain M9H61_04050 PF00271 Helicase conserved C-terminal domain M9H61_04055 PF03937 Flavinator of succinate dehydrogenase M9H61_04060 PF02559 CarD-like/TRCF domain M9H61_04060 PF00270 DEAD/DEAH box helicase M9H61_04060 PF00271 Helicase conserved C-terminal domain M9H61_04060 PF03461 TRCF domain M9H61_04060 PF17757 UvrB interaction domain M9H61_04070 PF01676 Metalloenzyme superfamily M9H61_04075 PF01791 DeoC/LacD family aldolase M9H61_04085 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_04090 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_04095 PF00497 Bacterial extracellular solute-binding proteins, family 3 M9H61_04100 PF00005 ABC transporter M9H61_04105 PF00672 HAMP domain M9H61_04105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_04105 PF02743 Cache domain M9H61_04120 PF03831 PhnA domain M9H61_04120 PF08274 PhnA Zinc-Ribbon M9H61_04135 PF02698 DUF218 domain M9H61_04140 PF13406 Transglycosylase SLT domain M9H61_04145 PF03330 Lytic transglycolase M9H61_04145 PF05036 Sporulation related domain M9H61_04150 PF07943 Penicillin-binding protein 5, C-terminal domain M9H61_04150 PF00768 D-alanyl-D-alanine carboxypeptidase M9H61_04155 PF02223 Thymidylate kinase M9H61_04160 PF09115 DNA polymerase III, delta subunit, C terminal M9H61_04165 PF08264 Anticodon-binding domain of tRNA M9H61_04165 PF09334 tRNA synthetases class I (M) M9H61_04170 PF01026 TatD related DNase M9H61_04175 PF03099 Biotin/lipoate A/B protein ligase family M9H61_04175 PF12706 Beta-lactamase superfamily domain M9H61_04180 PF00512 His Kinase A (phospho-acceptor) domain M9H61_04180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_04185 PF00072 Response regulator receiver domain M9H61_04185 PF00486 Transcriptional regulatory protein, C terminal M9H61_04200 PF02515 CoA-transferase family III M9H61_04220 PF01970 Tripartite tricarboxylate transporter TctA family M9H61_04225 PF00672 HAMP domain M9H61_04225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_04230 PF05145 Transition state regulatory protein AbrB M9H61_04240 PF00583 Acetyltransferase (GNAT) family M9H61_04245 PF00202 Aminotransferase class-III M9H61_04250 PF06339 Ectoine synthase M9H61_04255 PF13840 ACT domain M9H61_04255 PF00696 Amino acid kinase family M9H61_04260 PF03819 MazG nucleotide pyrophosphohydrolase domain M9H61_04265 PF00459 Inositol monophosphatase family M9H61_04270 PF16360 GTP-binding GTPase Middle Region M9H61_04270 PF13167 GTP-binding GTPase N-terminal M9H61_04270 PF01926 50S ribosome-binding GTPase M9H61_04275 PF17209 Hfq protein M9H61_04285 PF02080 TrkA-C domain M9H61_04285 PF02254 TrkA-N domain M9H61_04290 PF00072 Response regulator receiver domain M9H61_04290 PF02954 Bacterial regulatory protein, Fis family M9H61_04290 PF00158 Sigma-54 interaction domain M9H61_04295 PF00672 HAMP domain M9H61_04295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_04300 PF02954 Bacterial regulatory protein, Fis family M9H61_04300 PF00072 Response regulator receiver domain M9H61_04300 PF00158 Sigma-54 interaction domain M9H61_04305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_04305 PF00512 His Kinase A (phospho-acceptor) domain M9H61_04305 PF00989 PAS fold M9H61_04310 PF01207 Dihydrouridine synthase (Dus) M9H61_04315 PF01578 Cytochrome C assembly protein M9H61_04320 PF02542 YgbB family M9H61_04320 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M9H61_04325 PF04279 Intracellular septation protein A M9H61_04330 PF03091 CutA1 divalent ion tolerance protein M9H61_04350 PF13411 MerR HTH family regulatory protein M9H61_04355 PF00216 Bacterial DNA-binding protein M9H61_04360 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M9H61_04360 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M9H61_04365 PF02504 Fatty acid synthesis protein M9H61_04390 PF00586 AIR synthase related protein, N-terminal domain M9H61_04390 PF02769 AIR synthase related protein, C-terminal domain M9H61_04395 PF01029 NusB family M9H61_04400 PF00885 6,7-dimethyl-8-ribityllumazine synthase M9H61_04405 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M9H61_04405 PF00925 GTP cyclohydrolase II M9H61_04410 PF00677 Lumazine binding domain M9H61_04415 PF01872 RibD C-terminal domain M9H61_04415 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M9H61_04420 PF03477 ATP cone domain M9H61_04425 PF00464 Serine hydroxymethyltransferase M9H61_04430 PF02502 Ribose/Galactose Isomerase M9H61_04435 PF05443 ROS/MUCR transcriptional regulator protein M9H61_04440 PF13458 Periplasmic binding protein M9H61_04450 PF00005 ABC transporter M9H61_04455 PF12399 Branched-chain amino acid ATP-binding cassette transporter M9H61_04455 PF00005 ABC transporter M9H61_04460 PF11862 Domain of unknown function (DUF3382) M9H61_04460 PF02653 Branched-chain amino acid transport system / permease component M9H61_04465 PF02653 Branched-chain amino acid transport system / permease component M9H61_04470 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M9H61_04470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M9H61_04475 PF00378 Enoyl-CoA hydratase/isomerase M9H61_04480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M9H61_04480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M9H61_04480 PF02770 Acyl-CoA dehydrogenase, middle domain M9H61_04485 PF01053 Cys/Met metabolism PLP-dependent enzyme M9H61_04490 PF00455 DeoR C terminal sensor domain M9H61_04490 PF08220 DeoR-like helix-turn-helix domain M9H61_04495 PF07690 Major Facilitator Superfamily M9H61_04500 PF00490 Delta-aminolevulinic acid dehydratase M9H61_04505 PF13419 Haloacid dehalogenase-like hydrolase M9H61_04515 PF13193 AMP-binding enzyme C-terminal domain M9H61_04515 PF00501 AMP-binding enzyme M9H61_04525 PF00171 Aldehyde dehydrogenase family M9H61_04530 PF00291 Pyridoxal-phosphate dependent enzyme M9H61_04530 PF13291 ACT domain M9H61_04535 PF01613 Flavin reductase like domain M9H61_04540 PF01618 MotA/TolQ/ExbB proton channel family M9H61_04545 PF00691 OmpA family M9H61_04545 PF13677 Membrane MotB of proton-channel complex MotA/MotB M9H61_04550 PF04377 Arginine-tRNA-protein transferase, C terminus M9H61_04550 PF04376 Arginine-tRNA-protein transferase, N terminus M9H61_04555 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_04560 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_04570 PF00521 DNA gyrase/topoisomerase IV, subunit A M9H61_04570 PF03989 DNA gyrase C-terminal domain, beta-propeller M9H61_04575 PF11967 Recombination protein O N terminal M9H61_04575 PF02565 Recombination protein O C terminal M9H61_04590 PF01926 50S ribosome-binding GTPase M9H61_04590 PF07650 KH domain M9H61_04595 PF00035 Double-stranded RNA binding motif M9H61_04595 PF14622 Ribonuclease-III-like M9H61_04600 PF10502 Signal peptidase, peptidase S26 M9H61_04605 PF01648 4'-phosphopantetheinyl transferase superfamily M9H61_04610 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M9H61_04620 PF02824 TGS domain M9H61_04620 PF13291 ACT domain M9H61_04620 PF04607 Region found in RelA / SpoT proteins M9H61_04625 PF01192 RNA polymerase Rpb6 M9H61_04630 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M9H61_04640 PF03167 Uracil DNA glycosylase superfamily M9H61_04645 PF00570 HRDC domain M9H61_04645 PF16124 RecQ zinc-binding M9H61_04645 PF00270 DEAD/DEAH box helicase M9H61_04645 PF00271 Helicase conserved C-terminal domain M9H61_04645 PF09382 RQC domain M9H61_04650 PF00255 Glutathione peroxidase M9H61_04655 PF00174 Oxidoreductase molybdopterin binding domain M9H61_04660 PF01668 SmpB protein M9H61_04665 PF00701 Dihydrodipicolinate synthetase family M9H61_04670 PF14718 Soluble lytic murein transglycosylase L domain M9H61_04670 PF01464 Transglycosylase SLT domain M9H61_04685 PF01551 Peptidase family M23 M9H61_04690 PF04608 Phosphatidylglycerophosphatase A M9H61_04695 PF02464 Competence-damaged protein M9H61_04695 PF00994 Probable molybdopterin binding domain M9H61_04700 PF03364 Polyketide cyclase / dehydrase and lipid transport M9H61_04705 PF04055 Radical SAM superfamily M9H61_04710 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M9H61_04710 PF07992 Pyridine nucleotide-disulphide oxidoreductase M9H61_04715 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M9H61_04715 PF00364 Biotin-requiring enzyme M9H61_04715 PF02817 e3 binding domain M9H61_04720 PF00364 Biotin-requiring enzyme M9H61_04720 PF02779 Transketolase, pyrimidine binding domain M9H61_04720 PF02780 Transketolase, C-terminal domain M9H61_04725 PF00676 Dehydrogenase E1 component M9H61_04735 PF00113 Enolase, C-terminal TIM barrel domain M9H61_04735 PF03952 Enolase, N-terminal domain M9H61_04740 PF00793 DAHP synthetase I family M9H61_04745 PF06418 CTP synthase N-terminus M9H61_04745 PF00117 Glutamine amidotransferase class-I M9H61_04755 PF00121 Triosephosphate isomerase M9H61_04760 PF13145 PPIC-type PPIASE domain M9H61_04765 PF04715 Anthranilate synthase component I, N terminal region M9H61_04765 PF00425 chorismate binding enzyme M9H61_04770 PF04748 Divergent polysaccharide deacetylase M9H61_04775 PF00117 Glutamine amidotransferase class-I M9H61_04780 PF00591 Glycosyl transferase family, a/b domain M9H61_04780 PF02885 Glycosyl transferase family, helical bundle domain M9H61_04785 PF00218 Indole-3-glycerol phosphate synthase M9H61_04795 PF01967 MoaC family M9H61_04800 PF01726 LexA DNA binding domain M9H61_04800 PF00717 Peptidase S24-like M9H61_04805 PF03772 Competence protein M9H61_04805 PF13567 Domain of unknown function (DUF4131) M9H61_04805 PF00753 Metallo-beta-lactamase superfamily M9H61_04810 PF00749 tRNA synthetases class I (E and Q), catalytic domain M9H61_04815 PF00285 Citrate synthase, C-terminal domain M9H61_04820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M9H61_04825 PF02684 Lipid-A-disaccharide synthetase M9H61_04830 PF06230 LpxI C-terminal domain M9H61_04830 PF17930 LpxI N-terminal domain M9H61_04835 PF00132 Bacterial transferase hexapeptide (six repeats) M9H61_04835 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M9H61_04840 PF07977 FabA-like domain M9H61_04845 PF00132 Bacterial transferase hexapeptide (six repeats) M9H61_04845 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M9H61_04855 PF01103 Surface antigen M9H61_04855 PF07244 Surface antigen variable number repeat M9H61_04860 PF17820 PDZ domain M9H61_04860 PF02163 Peptidase family M50 M9H61_04865 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M9H61_04865 PF13288 DXP reductoisomerase C-terminal domain M9H61_04865 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M9H61_04875 PF01255 Putative undecaprenyl diphosphate synthase M9H61_04880 PF01765 Ribosome recycling factor M9H61_04885 PF00696 Amino acid kinase family M9H61_04890 PF00889 Elongation factor TS M9H61_04895 PF00318 Ribosomal protein S2 M9H61_04900 PF07733 Bacterial DNA polymerase III alpha NTPase domain M9H61_04900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M9H61_04900 PF14579 Helix-hairpin-helix motif M9H61_04900 PF02811 PHP domain M9H61_04905 PF00005 ABC transporter M9H61_04910 PF12704 MacB-like periplasmic core domain M9H61_04910 PF02687 FtsX-like permease family M9H61_04915 PF03129 Anticodon binding domain M9H61_04915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M9H61_04935 PF12706 Beta-lactamase superfamily domain M9H61_04935 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M9H61_04935 PF17770 Ribonuclease J C-terminal domain M9H61_04940 PF03309 Type III pantothenate kinase M9H61_04945 PF02237 Biotin protein ligase C terminal domain M9H61_04945 PF03099 Biotin/lipoate A/B protein ligase family M9H61_04950 PF00361 Proton-conducting membrane transporter M9H61_04955 PF00361 Proton-conducting membrane transporter M9H61_04955 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus M9H61_04960 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M9H61_04960 PF00361 Proton-conducting membrane transporter M9H61_04965 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M9H61_04970 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M9H61_04975 PF12838 4Fe-4S dicluster domain M9H61_04980 PF00146 NADH dehydrogenase M9H61_04985 PF00384 Molybdopterin oxidoreductase M9H61_04985 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal M9H61_04985 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M9H61_04990 PF10531 SLBB domain M9H61_04990 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M9H61_04990 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M9H61_05000 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M9H61_05005 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M9H61_05010 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M9H61_05015 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M9H61_05025 PF01706 FliG C-terminal domain M9H61_05025 PF14842 FliG N-terminal domain M9H61_05025 PF14841 FliG middle domain M9H61_05045 PF00216 Bacterial DNA-binding protein M9H61_05050 PF05362 Lon protease (S16) C-terminal proteolytic domain M9H61_05050 PF00004 ATPase family associated with various cellular activities (AAA) M9H61_05050 PF02190 ATP-dependent protease La (LON) substrate-binding domain M9H61_05055 PF10431 C-terminal, D2-small domain, of ClpB protein M9H61_05055 PF06689 ClpX C4-type zinc finger M9H61_05055 PF07724 AAA domain (Cdc48 subfamily) M9H61_05060 PF00574 Clp protease M9H61_05065 PF05697 Bacterial trigger factor protein (TF) M9H61_05065 PF05698 Bacterial trigger factor protein (TF) C-terminus M9H61_05065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M9H61_05080 PF01256 Carbohydrate kinase M9H61_05080 PF03853 YjeF-related protein N-terminus M9H61_05085 PF01266 FAD dependent oxidoreductase M9H61_05090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_05090 PF00512 His Kinase A (phospho-acceptor) domain M9H61_05090 PF00989 PAS fold M9H61_05095 PF00034 Cytochrome c M9H61_05100 PF00376 MerR family regulatory protein M9H61_05100 PF09278 MerR, DNA binding M9H61_05105 PF00403 Heavy-metal-associated domain M9H61_05110 PF00210 Ferritin-like domain M9H61_05115 PF00210 Ferritin-like domain M9H61_05120 PF04244 Deoxyribodipyrimidine photo-lyase-related protein M9H61_05130 PF01547 Bacterial extracellular solute-binding protein M9H61_05135 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_05140 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_05145 PF00005 ABC transporter M9H61_05145 PF17912 MalK OB fold domain M9H61_05150 PF00672 HAMP domain M9H61_05150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_05150 PF00512 His Kinase A (phospho-acceptor) domain M9H61_05155 PF00072 Response regulator receiver domain M9H61_05155 PF00486 Transcriptional regulatory protein, C terminal M9H61_05165 PF01593 Flavin containing amine oxidoreductase M9H61_05180 PF00342 Phosphoglucose isomerase M9H61_05185 PF00294 pfkB family carbohydrate kinase M9H61_05195 PF00491 Arginase family M9H61_05200 PF00171 Aldehyde dehydrogenase family M9H61_05205 PF07883 Cupin domain M9H61_05205 PF01381 Helix-turn-helix M9H61_05210 PF00120 Glutamine synthetase, catalytic domain M9H61_05215 PF00202 Aminotransferase class-III M9H61_05220 PF01266 FAD dependent oxidoreductase M9H61_05230 PF01266 FAD dependent oxidoreductase M9H61_05235 PF03313 Serine dehydratase alpha chain M9H61_05245 PF05199 GMC oxidoreductase M9H61_05245 PF00732 GMC oxidoreductase M9H61_05250 PF00171 Aldehyde dehydrogenase family M9H61_05255 PF13977 BetI-type transcriptional repressor, C-terminal M9H61_05255 PF00440 Bacterial regulatory proteins, tetR family M9H61_05260 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M9H61_05265 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_05270 PF00571 CBS domain M9H61_05270 PF00005 ABC transporter M9H61_05280 PF03466 LysR substrate binding domain M9H61_05280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_05290 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_05300 PF00005 ABC transporter M9H61_05300 PF08402 TOBE domain M9H61_05305 PF00202 Aminotransferase class-III M9H61_05310 PF05853 beta-keto acid cleavage enzyme M9H61_05315 PF00850 Histone deacetylase domain M9H61_05320 PF01266 FAD dependent oxidoreductase M9H61_05325 PF07687 Peptidase dimerisation domain M9H61_05325 PF01546 Peptidase family M20/M25/M40 M9H61_05330 PF01042 Endoribonuclease L-PSP M9H61_05350 PF02423 Ornithine cyclodeaminase/mu-crystallin family M9H61_05365 PF01168 Alanine racemase, N-terminal domain M9H61_05365 PF14031 Putative serine dehydratase domain M9H61_05370 PF07171 MlrC C-terminus M9H61_05370 PF07364 Metallopeptidase family M81 M9H61_05375 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_05380 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_05390 PF01042 Endoribonuclease L-PSP M9H61_05395 PF01418 Helix-turn-helix domain, rpiR family M9H61_05395 PF02685 Glucokinase M9H61_05395 PF01380 SIS domain M9H61_05400 PF00294 pfkB family carbohydrate kinase M9H61_05410 PF17243 POTRA domain TamA domain 1 M9H61_05410 PF01103 Surface antigen M9H61_05415 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M9H61_05415 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M9H61_05445 PF00206 Lyase M9H61_05445 PF10397 Adenylosuccinate lyase C-terminus M9H61_05450 PF02803 Thiolase, C-terminal domain M9H61_05450 PF00108 Thiolase, N-terminal domain M9H61_05455 PF01144 Coenzyme A transferase M9H61_05460 PF01144 Coenzyme A transferase M9H61_05470 PF00775 Dioxygenase M9H61_05470 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M9H61_05480 PF12146 Serine aminopeptidase, S33 M9H61_05485 PF03466 LysR substrate binding domain M9H61_05485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_05490 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_05500 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_05510 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_05515 PF00005 ABC transporter M9H61_05525 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M9H61_05525 PF01266 FAD dependent oxidoreductase M9H61_05545 PF07690 Major Facilitator Superfamily M9H61_05555 PF08021 Siderophore-interacting FAD-binding domain M9H61_05555 PF04954 Siderophore-interacting protein M9H61_05580 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_05595 PF00156 Phosphoribosyl transferase domain M9H61_05615 PF01494 FAD binding domain M9H61_05650 PF00128 Alpha amylase, catalytic domain M9H61_05655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M9H61_05655 PF00205 Thiamine pyrophosphate enzyme, central domain M9H61_05655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M9H61_05670 PF07690 Major Facilitator Superfamily M9H61_05690 PF00392 Bacterial regulatory proteins, gntR family M9H61_05690 PF07729 FCD domain M9H61_05700 PF02653 Branched-chain amino acid transport system / permease component M9H61_05705 PF02653 Branched-chain amino acid transport system / permease component M9H61_05710 PF00005 ABC transporter M9H61_05715 PF13407 Periplasmic binding protein domain M9H61_05720 PF01263 Aldose 1-epimerase M9H61_05735 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_05745 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_05750 PF07729 FCD domain M9H61_05750 PF00392 Bacterial regulatory proteins, gntR family M9H61_05755 PF12833 Helix-turn-helix domain M9H61_05755 PF01965 DJ-1/PfpI family M9H61_05810 PF01433 Peptidase family M1 domain M9H61_05810 PF11940 Domain of unknown function (DUF3458) Ig-like fold M9H61_05810 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M9H61_05815 PF00196 Bacterial regulatory proteins, luxR family M9H61_05815 PF00072 Response regulator receiver domain M9H61_05825 PF01594 AI-2E family transporter M9H61_05830 PF02311 AraC-like ligand binding domain M9H61_05830 PF12833 Helix-turn-helix domain M9H61_05835 PF01810 LysE type translocator M9H61_05855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_05855 PF00672 HAMP domain M9H61_05855 PF00512 His Kinase A (phospho-acceptor) domain M9H61_05855 PF18698 Histidine kinase sensor domain M9H61_05865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_05865 PF00512 His Kinase A (phospho-acceptor) domain M9H61_05875 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_05880 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_05905 PF01032 FecCD transport family M9H61_05910 PF00005 ABC transporter M9H61_05925 PF02472 Biopolymer transport protein ExbD/TolR M9H61_05930 PF02472 Biopolymer transport protein ExbD/TolR M9H61_05935 PF01618 MotA/TolQ/ExbB proton channel family M9H61_05955 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M9H61_05960 PF01467 Cytidylyltransferase-like M9H61_05965 PF00521 DNA gyrase/topoisomerase IV, subunit A M9H61_05965 PF03989 DNA gyrase C-terminal domain, beta-propeller M9H61_05995 PF01979 Amidohydrolase family M9H61_06000 PF02463 RecF/RecN/SMC N terminal domain M9H61_06015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M9H61_06015 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M9H61_06020 PF00155 Aminotransferase class I and II M9H61_06025 PF00543 Nitrogen regulatory protein P-II M9H61_06030 PF00120 Glutamine synthetase, catalytic domain M9H61_06030 PF03951 Glutamine synthetase, beta-Grasp domain M9H61_06035 PF13181 Tetratricopeptide repeat M9H61_06040 PF13181 Tetratricopeptide repeat M9H61_06045 PF13181 Tetratricopeptide repeat M9H61_06050 PF00990 Diguanylate cyclase, GGDEF domain M9H61_06060 PF02566 OsmC-like protein M9H61_06075 PF12833 Helix-turn-helix domain M9H61_06075 PF14525 AraC-binding-like domain M9H61_06085 PF00962 Adenosine/AMP deaminase M9H61_06090 PF13181 Tetratricopeptide repeat M9H61_06095 PF00563 EAL domain M9H61_06095 PF08495 FIST N domain M9H61_06095 PF00990 Diguanylate cyclase, GGDEF domain M9H61_06095 PF10442 FIST C domain M9H61_06110 PF00392 Bacterial regulatory proteins, gntR family M9H61_06110 PF07729 FCD domain M9H61_06115 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component M9H61_06115 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_06125 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_06130 PF06445 GyrI-like small molecule binding domain M9H61_06130 PF12833 Helix-turn-helix domain M9H61_06140 PF04909 Amidohydrolase M9H61_06150 PF00043 Glutathione S-transferase, C-terminal domain M9H61_06150 PF02798 Glutathione S-transferase, N-terminal domain M9H61_06155 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_06165 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_06185 PF00892 EamA-like transporter family M9H61_06220 PF03070 TENA/THI-4/PQQC family M9H61_06225 PF04384 Iron-sulphur cluster assembly M9H61_06230 PF00111 2Fe-2S iron-sulfur cluster binding domain M9H61_06235 PF00012 Hsp70 protein M9H61_06240 PF00226 DnaJ domain M9H61_06240 PF07743 HSCB C-terminal oligomerisation domain M9H61_06245 PF01521 Iron-sulphur cluster biosynthesis M9H61_06250 PF01592 NifU-like N terminal domain M9H61_06255 PF00266 Aminotransferase class-V M9H61_06260 PF00266 Aminotransferase class-V M9H61_06265 PF02082 Transcriptional regulator M9H61_06270 PF06426 Serine acetyltransferase, N-terminal M9H61_06270 PF00132 Bacterial transferase hexapeptide (six repeats) M9H61_06275 PF02129 X-Pro dipeptidyl-peptidase (S15 family) M9H61_06280 PF03702 Anhydro-N-acetylmuramic acid kinase M9H61_06300 PF00579 tRNA synthetases class I (W and Y) M9H61_06310 PF08335 GlnD PII-uridylyltransferase M9H61_06310 PF03710 Glutamate-ammonia ligase adenylyltransferase M9H61_06315 PF00578 AhpC/TSA family M9H61_06325 PF04305 Protein of unknown function (DUF455) M9H61_06330 PF00107 Zinc-binding dehydrogenase M9H61_06330 PF08240 Alcohol dehydrogenase GroES-like domain M9H61_06335 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M9H61_06335 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M9H61_06340 PF02805 Metal binding domain of Ada M9H61_06340 PF06029 AlkA N-terminal domain M9H61_06340 PF00730 HhH-GPD superfamily base excision DNA repair protein M9H61_06340 PF12833 Helix-turn-helix domain M9H61_06360 PF00912 Transglycosylase M9H61_06360 PF00905 Penicillin binding protein transpeptidase domain M9H61_06360 PF17092 Penicillin-binding protein OB-like domain M9H61_06365 PF01520 N-acetylmuramoyl-L-alanine amidase M9H61_06365 PF11741 AMIN domain M9H61_06370 PF12111 Polyribonucleotide phosphorylase C terminal M9H61_06370 PF10150 Ribonuclease E/G family M9H61_06370 PF00575 S1 RNA binding domain M9H61_06375 PF00155 Aminotransferase class I and II M9H61_06385 PF01435 Peptidase family M48 M9H61_06395 PF06965 Na+/H+ antiporter 1 M9H61_06395 PF13462 Thioredoxin M9H61_06400 PF05690 Thiazole biosynthesis protein ThiG M9H61_06400 PF02597 ThiS family M9H61_06410 PF01220 Dehydroquinase class II M9H61_06415 PF00364 Biotin-requiring enzyme M9H61_06420 PF02785 Biotin carboxylase C-terminal domain M9H61_06420 PF00289 Biotin carboxylase, N-terminal domain M9H61_06420 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M9H61_06425 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M9H61_06435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M9H61_06435 PF01842 ACT domain M9H61_06435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M9H61_06445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_06445 PF00672 HAMP domain M9H61_06460 PF00004 ATPase family associated with various cellular activities (AAA) M9H61_06460 PF07724 AAA domain (Cdc48 subfamily) M9H61_06460 PF17871 AAA lid domain M9H61_06460 PF02861 Clp amino terminal domain, pathogenicity island component M9H61_06460 PF10431 C-terminal, D2-small domain, of ClpB protein M9H61_06465 PF02617 ATP-dependent Clp protease adaptor protein ClpS M9H61_06485 PF00768 D-alanyl-D-alanine carboxypeptidase M9H61_06485 PF07943 Penicillin-binding protein 5, C-terminal domain M9H61_06490 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M9H61_06490 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M9H61_06490 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M9H61_06490 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M9H61_06495 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M9H61_06495 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M9H61_06495 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M9H61_06500 PF00483 Nucleotidyl transferase M9H61_06515 PF13614 AAA domain M9H61_06525 PF01266 FAD dependent oxidoreductase M9H61_06535 PF01323 DSBA-like thioredoxin domain M9H61_06545 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M9H61_06545 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M9H61_06555 PF07715 TonB-dependent Receptor Plug Domain M9H61_06555 PF00593 TonB dependent receptor M9H61_06575 PF04972 BON domain M9H61_06580 PF01619 Proline dehydrogenase M9H61_06580 PF14850 DNA-binding domain of Proline dehydrogenase M9H61_06580 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M9H61_06580 PF00171 Aldehyde dehydrogenase family M9H61_06585 PF01037 Lrp/AsnC ligand binding domain M9H61_06590 PF01323 DSBA-like thioredoxin domain M9H61_06595 PF01039 Carboxyl transferase domain M9H61_06600 PF00378 Enoyl-CoA hydratase/isomerase M9H61_06605 PF18140 Propionyl-coenzyme A carboxylase BT domain M9H61_06605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M9H61_06605 PF00364 Biotin-requiring enzyme M9H61_06605 PF00289 Biotin carboxylase, N-terminal domain M9H61_06605 PF02785 Biotin carboxylase C-terminal domain M9H61_06610 PF00682 HMGL-like M9H61_06620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_06620 PF00672 HAMP domain M9H61_06630 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M9H61_06630 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M9H61_06645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_06645 PF03466 LysR substrate binding domain M9H61_06655 PF03976 Polyphosphate kinase 2 (PPK2) M9H61_06660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M9H61_06660 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M9H61_06665 PF13180 PDZ domain M9H61_06665 PF03572 Peptidase family S41 M9H61_06670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M9H61_06670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M9H61_06670 PF12806 Acetyl-CoA dehydrogenase C-terminal like M9H61_06670 PF02770 Acyl-CoA dehydrogenase, middle domain M9H61_06675 PF03739 Lipopolysaccharide export system permease LptF/LptG M9H61_06685 PF04453 LPS transport system D M9H61_06690 PF00639 PPIC-type PPIASE domain M9H61_06690 PF09312 SurA N-terminal domain M9H61_06695 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M9H61_06700 PF00398 Ribosomal RNA adenine dimethylase M9H61_06705 PF00625 Guanylate kinase M9H61_06710 PF03755 YicC-like family, N-terminal region M9H61_06710 PF08340 Domain of unknown function (DUF1732) M9H61_06715 PF00106 short chain dehydrogenase M9H61_06720 PF02618 YceG-like family M9H61_06725 PF00109 Beta-ketoacyl synthase, N-terminal domain M9H61_06725 PF02801 Beta-ketoacyl synthase, C-terminal domain M9H61_06730 PF00550 Phosphopantetheine attachment site M9H61_06740 PF00698 Acyl transferase domain M9H61_06745 PF00654 Voltage gated chloride channel M9H61_06750 PF01250 Ribosomal protein S6 M9H61_06755 PF01084 Ribosomal protein S18 M9H61_06765 PF01281 Ribosomal protein L9, N-terminal domain M9H61_06765 PF03948 Ribosomal protein L9, C-terminal domain M9H61_06770 PF03796 DnaB-like helicase C terminal domain M9H61_06770 PF00772 DnaB-like helicase N terminal domain M9H61_06775 PF01168 Alanine racemase, N-terminal domain M9H61_06775 PF00842 Alanine racemase, C-terminal domain M9H61_06780 PF02405 Permease MlaE M9H61_06785 PF00005 ABC transporter M9H61_06790 PF18073 Rubredoxin metal binding domain M9H61_06790 PF06745 KaiC M9H61_06800 PF00156 Phosphoribosyl transferase domain M9H61_06800 PF13537 Glutamine amidotransferase domain M9H61_06805 PF00106 short chain dehydrogenase M9H61_06815 PF01926 50S ribosome-binding GTPase M9H61_06815 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M9H61_06820 PF13360 PQQ-like domain M9H61_06845 PF01011 PQQ enzyme repeat M9H61_06850 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M9H61_06855 PF00291 Pyridoxal-phosphate dependent enzyme M9H61_06870 PF00011 Hsp20/alpha crystallin family M9H61_06875 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M9H61_06880 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_06885 PF00990 Diguanylate cyclase, GGDEF domain M9H61_06890 PF00118 TCP-1/cpn60 chaperonin family M9H61_06895 PF00166 Chaperonin 10 Kd subunit M9H61_06905 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase M9H61_06910 PF00483 Nucleotidyl transferase M9H61_06915 PF04321 RmlD substrate binding domain M9H61_06920 PF16363 GDP-mannose 4,6 dehydratase M9H61_06925 PF01380 SIS domain M9H61_06930 PF12804 MobA-like NTP transferase domain M9H61_06930 PF00132 Bacterial transferase hexapeptide (six repeats) M9H61_06935 PF13419 Haloacid dehalogenase-like hydrolase M9H61_06945 PF00920 Dehydratase family M9H61_06950 PF02653 Branched-chain amino acid transport system / permease component M9H61_06955 PF00005 ABC transporter M9H61_06960 PF13407 Periplasmic binding protein domain M9H61_06965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_06965 PF03466 LysR substrate binding domain M9H61_06985 PF01641 SelR domain M9H61_07000 PF00300 Histidine phosphatase superfamily (branch 1) M9H61_07005 PF12706 Beta-lactamase superfamily domain M9H61_07010 PF08402 TOBE domain M9H61_07010 PF00005 ABC transporter M9H61_07015 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_07020 PF13416 Bacterial extracellular solute-binding protein M9H61_07025 PF08220 DeoR-like helix-turn-helix domain M9H61_07025 PF00455 DeoR C terminal sensor domain M9H61_07095 PF00211 Adenylate and Guanylate cyclase catalytic domain M9H61_07100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_07100 PF00672 HAMP domain M9H61_07100 PF16527 Two-component sensor protein CpxA, periplasmic domain M9H61_07100 PF00512 His Kinase A (phospho-acceptor) domain M9H61_07105 PF00072 Response regulator receiver domain M9H61_07105 PF00486 Transcriptional regulatory protein, C terminal M9H61_07120 PF02690 Na+/Pi-cotransporter M9H61_07130 PF01266 FAD dependent oxidoreductase M9H61_07130 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M9H61_07135 PF00733 Asparagine synthase M9H61_07135 PF13537 Glutamine amidotransferase domain M9H61_07140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_07140 PF08269 Cache domain M9H61_07145 PF00158 Sigma-54 interaction domain M9H61_07145 PF01590 GAF domain M9H61_07145 PF02954 Bacterial regulatory protein, Fis family M9H61_07150 PF00171 Aldehyde dehydrogenase family M9H61_07160 PF03601 Conserved hypothetical protein 698 M9H61_07165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_07165 PF03466 LysR substrate binding domain M9H61_07175 PF01654 Cytochrome bd terminal oxidase subunit I M9H61_07180 PF02322 Cytochrome bd terminal oxidase subunit II M9H61_07190 PF00155 Aminotransferase class I and II M9H61_07215 PF01507 Phosphoadenosine phosphosulfate reductase family M9H61_07220 PF00009 Elongation factor Tu GTP binding domain M9H61_07235 PF01066 CDP-alcohol phosphatidyltransferase M9H61_07250 PF01541 GIY-YIG catalytic domain M9H61_07260 PF01081 KDPG and KHG aldolase M9H61_07265 PF05035 2-keto-3-deoxy-galactonokinase M9H61_07275 PF00141 Peroxidase M9H61_07315 PF05544 Proline racemase M9H61_07320 PF00392 Bacterial regulatory proteins, gntR family M9H61_07320 PF07729 FCD domain M9H61_07325 PF05544 Proline racemase M9H61_07330 PF01266 FAD dependent oxidoreductase M9H61_07335 PF00701 Dihydrodipicolinate synthetase family M9H61_07340 PF13477 Glycosyl transferase 4-like M9H61_07340 PF00534 Glycosyl transferases group 1 M9H61_07345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M9H61_07345 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M9H61_07355 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M9H61_07355 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M9H61_07370 PF00171 Aldehyde dehydrogenase family M9H61_07380 PF07690 Major Facilitator Superfamily M9H61_07385 PF07715 TonB-dependent Receptor Plug Domain M9H61_07385 PF00593 TonB dependent receptor M9H61_07400 PF01266 FAD dependent oxidoreductase M9H61_07400 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M9H61_07405 PF17912 MalK OB fold domain M9H61_07405 PF00005 ABC transporter M9H61_07410 PF17912 MalK OB fold domain M9H61_07410 PF00005 ABC transporter M9H61_07415 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_07420 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_07445 PF12804 MobA-like NTP transferase domain M9H61_07450 PF00893 Small Multidrug Resistance protein M9H61_07455 PF01979 Amidohydrolase family M9H61_07465 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_07470 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_07475 PF00005 ABC transporter M9H61_07485 PF00202 Aminotransferase class-III M9H61_07490 PF08362 YcdC-like protein, C-terminal region M9H61_07490 PF00440 Bacterial regulatory proteins, tetR family M9H61_07500 PF07687 Peptidase dimerisation domain M9H61_07500 PF01546 Peptidase family M20/M25/M40 M9H61_07505 PF01180 Dihydroorotate dehydrogenase M9H61_07510 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M9H61_07510 PF07992 Pyridine nucleotide-disulphide oxidoreductase M9H61_07515 PF03061 Thioesterase superfamily M9H61_07520 PF07690 Major Facilitator Superfamily M9H61_07525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M9H61_07525 PF00529 HlyD membrane-fusion protein of T1SS M9H61_07535 PF16325 Peptidase family U32 C-terminal domain M9H61_07535 PF01136 Peptidase family U32 M9H61_07550 PF03600 Citrate transporter M9H61_07555 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M9H61_07555 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M9H61_07565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_07565 PF00672 HAMP domain M9H61_07565 PF00512 His Kinase A (phospho-acceptor) domain M9H61_07565 PF01627 Hpt domain M9H61_07565 PF00072 Response regulator receiver domain M9H61_07565 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M9H61_07570 PF00072 Response regulator receiver domain M9H61_07570 PF01627 Hpt domain M9H61_07570 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M9H61_07570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_07570 PF00672 HAMP domain M9H61_07570 PF00512 His Kinase A (phospho-acceptor) domain M9H61_07580 PF00005 ABC transporter M9H61_07580 PF17912 MalK OB fold domain M9H61_07585 PF00294 pfkB family carbohydrate kinase M9H61_07590 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_07595 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_07600 PF01547 Bacterial extracellular solute-binding protein M9H61_07605 PF00480 ROK family M9H61_07610 PF08450 SMP-30/Gluconolactonase/LRE-like region M9H61_07615 PF00005 ABC transporter M9H61_07625 PF01497 Periplasmic binding protein M9H61_07630 PF01032 FecCD transport family M9H61_07655 PF01370 NAD dependent epimerase/dehydratase family M9H61_07660 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_07670 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_07675 PF00701 Dihydrodipicolinate synthetase family M9H61_07685 PF08450 SMP-30/Gluconolactonase/LRE-like region M9H61_07690 PF07729 FCD domain M9H61_07690 PF00392 Bacterial regulatory proteins, gntR family M9H61_07695 PF01263 Aldose 1-epimerase M9H61_07700 PF07729 FCD domain M9H61_07700 PF00392 Bacterial regulatory proteins, gntR family M9H61_07705 PF13419 Haloacid dehalogenase-like hydrolase M9H61_07710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M9H61_07710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M9H61_07715 PF00873 AcrB/AcrD/AcrF family M9H61_07720 PF00529 HlyD membrane-fusion protein of T1SS M9H61_07720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M9H61_07725 PF00440 Bacterial regulatory proteins, tetR family M9H61_07725 PF13977 BetI-type transcriptional repressor, C-terminal M9H61_07745 PF00005 ABC transporter M9H61_07750 PF02653 Branched-chain amino acid transport system / permease component M9H61_07755 PF04955 HupE / UreJ protein M9H61_07760 PF07715 TonB-dependent Receptor Plug Domain M9H61_07760 PF00593 TonB dependent receptor M9H61_07775 PF04542 Sigma-70 region 2 M9H61_07775 PF08281 Sigma-70, region 4 M9H61_07775 PF12680 SnoaL-like domain M9H61_07780 PF00378 Enoyl-CoA hydratase/isomerase M9H61_07790 PF00392 Bacterial regulatory proteins, gntR family M9H61_07795 PF01053 Cys/Met metabolism PLP-dependent enzyme M9H61_07800 PF01547 Bacterial extracellular solute-binding protein M9H61_07805 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_07810 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_07815 PF00005 ABC transporter M9H61_07815 PF17912 MalK OB fold domain M9H61_07815 PF03459 TOBE domain M9H61_07825 PF00797 N-acetyltransferase M9H61_07830 PF01063 Amino-transferase class IV M9H61_07835 PF00892 EamA-like transporter family M9H61_07855 PF01180 Dihydroorotate dehydrogenase M9H61_07865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M9H61_07880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_07880 PF03466 LysR substrate binding domain M9H61_07885 PF02567 Phenazine biosynthesis-like protein M9H61_07900 PF12728 Helix-turn-helix domain M9H61_07930 PF05016 ParE toxin of type II toxin-antitoxin system, parDE M9H61_07935 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH M9H61_07975 PF07484 Phage Tail Collar Domain M9H61_08050 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_08060 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain M9H61_08060 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain M9H61_08065 PF07005 Sugar-binding N-terminal domain M9H61_08065 PF17042 Nucleotide-binding C-terminal domain M9H61_08075 PF00512 His Kinase A (phospho-acceptor) domain M9H61_08075 PF00072 Response regulator receiver domain M9H61_08075 PF01627 Hpt domain M9H61_08075 PF00672 HAMP domain M9H61_08075 PF17149 Periplasmic sensor domain found in signal transduction proteins M9H61_08075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_08080 PF01063 Amino-transferase class IV M9H61_08105 PF03466 LysR substrate binding domain M9H61_08105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_08110 PF01921 tRNA synthetases class I (K) M9H61_08125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_08125 PF00672 HAMP domain M9H61_08125 PF12729 Four helix bundle sensory module for signal transduction M9H61_08130 PF01047 MarR family M9H61_08135 PF07859 alpha/beta hydrolase fold M9H61_08140 PF02566 OsmC-like protein M9H61_08150 PF08220 DeoR-like helix-turn-helix domain M9H61_08150 PF00455 DeoR C terminal sensor domain M9H61_08155 PF03812 2-keto-3-deoxygluconate permease M9H61_08160 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M9H61_08165 PF09335 SNARE associated Golgi protein M9H61_08170 PF01810 LysE type translocator M9H61_08180 PF02311 AraC-like ligand binding domain M9H61_08180 PF12833 Helix-turn-helix domain M9H61_08185 PF04909 Amidohydrolase M9H61_08190 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_08200 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component M9H61_08200 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_08205 PF13307 Helicase C-terminal domain M9H61_08205 PF04851 Type III restriction enzyme, res subunit M9H61_08210 PF03033 Glycosyltransferase family 28 N-terminal domain M9H61_08210 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase M9H61_08225 PF04945 YHS domain M9H61_08230 PF03729 Short repeat of unknown function (DUF308) M9H61_08245 PF03707 Bacterial signalling protein N terminal repeat M9H61_08245 PF00990 Diguanylate cyclase, GGDEF domain M9H61_08245 PF00563 EAL domain M9H61_08255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M9H61_08255 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M9H61_08265 PF05175 Methyltransferase small domain M9H61_08270 PF04102 SlyX M9H61_08280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_08280 PF03466 LysR substrate binding domain M9H61_08290 PF03449 Transcription elongation factor, N-terminal M9H61_08290 PF01272 Transcription elongation factor, GreA/GreB, C-term M9H61_08295 PF01381 Helix-turn-helix M9H61_08295 PF07883 Cupin domain M9H61_08305 PF02653 Branched-chain amino acid transport system / permease component M9H61_08310 PF02653 Branched-chain amino acid transport system / permease component M9H61_08310 PF11862 Domain of unknown function (DUF3382) M9H61_08315 PF00005 ABC transporter M9H61_08315 PF12399 Branched-chain amino acid ATP-binding cassette transporter M9H61_08320 PF00005 ABC transporter M9H61_08325 PF01546 Peptidase family M20/M25/M40 M9H61_08325 PF07687 Peptidase dimerisation domain M9H61_08330 PF01425 Amidase M9H61_08335 PF00270 DEAD/DEAH box helicase M9H61_08335 PF08482 ATP-dependent helicase C-terminal M9H61_08335 PF00271 Helicase conserved C-terminal domain M9H61_08335 PF04408 Helicase associated domain (HA2) M9H61_08360 PF02706 Chain length determinant protein M9H61_08360 PF13807 G-rich domain on putative tyrosine kinase M9H61_08360 PF13614 AAA domain M9H61_08365 PF03808 Glycosyl transferase WecB/TagA/CpsF family M9H61_08400 PF00534 Glycosyl transferases group 1 M9H61_08400 PF13439 Glycosyltransferase Family 4 M9H61_08410 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M9H61_08410 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M9H61_08410 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M9H61_08415 PF08264 Anticodon-binding domain of tRNA M9H61_08415 PF13603 Leucyl-tRNA synthetase, Domain 2 M9H61_08415 PF09334 tRNA synthetases class I (M) M9H61_08445 PF00669 Bacterial flagellin N-terminal helical region M9H61_08445 PF00700 Bacterial flagellin C-terminal helical region M9H61_08460 PF01209 ubiE/COQ5 methyltransferase family M9H61_08465 PF06508 Queuosine biosynthesis protein QueC M9H61_08470 PF01242 6-pyruvoyl tetrahydropterin synthase M9H61_08475 PF04055 Radical SAM superfamily M9H61_08485 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family M9H61_08490 PF12833 Helix-turn-helix domain M9H61_08495 PF12852 Cupin M9H61_08495 PF12833 Helix-turn-helix domain M9H61_08510 PF00873 AcrB/AcrD/AcrF family M9H61_08525 PF01066 CDP-alcohol phosphatidyltransferase M9H61_08530 PF02666 Phosphatidylserine decarboxylase M9H61_08545 PF03641 Possible lysine decarboxylase M9H61_08550 PF00034 Cytochrome c M9H61_08550 PF03150 Di-haem cytochrome c peroxidase M9H61_08555 PF08220 DeoR-like helix-turn-helix domain M9H61_08555 PF00455 DeoR C terminal sensor domain M9H61_08560 PF00005 ABC transporter M9H61_08560 PF08402 TOBE domain M9H61_08565 PF13416 Bacterial extracellular solute-binding protein M9H61_08570 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_08575 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_08590 PF13533 Biotin-lipoyl like M9H61_08610 PF00180 Isocitrate/isopropylmalate dehydrogenase M9H61_08615 PF12833 Helix-turn-helix domain M9H61_08615 PF14525 AraC-binding-like domain M9H61_08640 PF08281 Sigma-70, region 4 M9H61_08640 PF04542 Sigma-70 region 2 M9H61_08660 PF05726 Pirin C-terminal cupin domain M9H61_08660 PF02678 Pirin M9H61_08665 PF03358 NADPH-dependent FMN reductase M9H61_08670 PF03009 Glycerophosphoryl diester phosphodiesterase family M9H61_08680 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family M9H61_08685 PF17862 AAA+ lid domain M9H61_08685 PF01434 Peptidase family M41 M9H61_08685 PF00004 ATPase family associated with various cellular activities (AAA) M9H61_08705 PF00440 Bacterial regulatory proteins, tetR family M9H61_08705 PF08362 YcdC-like protein, C-terminal region M9H61_08715 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_08720 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_08730 PF00005 ABC transporter M9H61_08730 PF08402 TOBE domain M9H61_08740 PF00171 Aldehyde dehydrogenase family M9H61_08750 PF07690 Major Facilitator Superfamily M9H61_08760 PF10011 Predicted membrane protein (DUF2254) M9H61_08765 PF06445 GyrI-like small molecule binding domain M9H61_08765 PF12833 Helix-turn-helix domain M9H61_08770 PF01037 Lrp/AsnC ligand binding domain M9H61_08775 PF00892 EamA-like transporter family M9H61_08780 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M9H61_08780 PF01411 tRNA synthetases class II (A) M9H61_08780 PF02272 DHHA1 domain M9H61_08785 PF00958 GMP synthase C terminal domain M9H61_08785 PF13302 Acetyltransferase (GNAT) domain M9H61_08785 PF13673 Acetyltransferase (GNAT) domain M9H61_08785 PF00117 Glutamine amidotransferase class-I M9H61_08785 PF03352 Methyladenine glycosylase M9H61_08795 PF07043 Protein of unknown function (DUF1328) M9H61_08820 PF00154 recA bacterial DNA recombination protein M9H61_08830 PF08753 NikR C terminal nickel binding domain M9H61_08830 PF01402 Ribbon-helix-helix protein, copG family M9H61_08875 PF01699 Sodium/calcium exchanger protein M9H61_08885 PF00072 Response regulator receiver domain M9H61_08885 PF13188 PAS domain M9H61_08885 PF08448 PAS fold M9H61_08885 PF00512 His Kinase A (phospho-acceptor) domain M9H61_08885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_08890 PF08269 Cache domain M9H61_08890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_08895 PF01312 FlhB HrpN YscU SpaS Family M9H61_08900 PF01311 Bacterial export proteins, family 1 M9H61_08905 PF01313 Bacterial export proteins, family 3 M9H61_08910 PF02049 Flagellar hook-basal body complex protein FliE M9H61_08915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M9H61_08915 PF00460 Flagella basal body rod protein M9H61_08920 PF00460 Flagella basal body rod protein M9H61_08925 PF02599 Global regulator protein family M9H61_08930 PF01312 FlhB HrpN YscU SpaS Family M9H61_08945 PF00813 FliP family M9H61_08960 PF00691 OmpA family M9H61_08960 PF13677 Membrane MotB of proton-channel complex MotA/MotB M9H61_08975 PF00072 Response regulator receiver domain M9H61_08990 PF02154 Flagellar motor switch protein FliM M9H61_08990 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M9H61_08995 PF03748 Flagellar basal body-associated protein FliL M9H61_09005 PF00460 Flagella basal body rod protein M9H61_09005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M9H61_09010 PF00460 Flagella basal body rod protein M9H61_09010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M9H61_09020 PF02107 Flagellar L-ring protein M9H61_09025 PF01258 Prokaryotic dksA/traR C4-type zinc finger M9H61_09030 PF10768 Class II flagellar assembly regulator M9H61_09035 PF02119 Flagellar P-ring protein M9H61_09040 PF10135 Rod binding protein M9H61_09050 PF07196 Flagellin hook IN motif M9H61_09050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M9H61_09055 PF00700 Bacterial flagellin C-terminal helical region M9H61_09055 PF00669 Bacterial flagellin N-terminal helical region M9H61_09060 PF02623 FliW protein M9H61_09065 PF00669 Bacterial flagellin N-terminal helical region M9H61_09065 PF07196 Flagellin hook IN motif M9H61_09065 PF00700 Bacterial flagellin C-terminal helical region M9H61_09070 PF00669 Bacterial flagellin N-terminal helical region M9H61_09070 PF07196 Flagellin hook IN motif M9H61_09070 PF00700 Bacterial flagellin C-terminal helical region M9H61_09075 PF00669 Bacterial flagellin N-terminal helical region M9H61_09075 PF00700 Bacterial flagellin C-terminal helical region M9H61_09075 PF07196 Flagellin hook IN motif M9H61_09080 PF07196 Flagellin hook IN motif M9H61_09080 PF00700 Bacterial flagellin C-terminal helical region M9H61_09080 PF00669 Bacterial flagellin N-terminal helical region M9H61_09095 PF02561 Flagellar protein FliS M9H61_09105 PF03963 Flagellar hook capping protein - N-terminal region M9H61_09105 PF13861 FlgD Tudor-like domain M9H61_09105 PF13860 FlgD Ig-like domain M9H61_09110 PF07559 Flagellar basal body protein FlaE M9H61_09110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M9H61_09110 PF00460 Flagella basal body rod protein M9H61_09115 PF01514 Secretory protein of YscJ/FliF family M9H61_09115 PF08345 Flagellar M-ring protein C-terminal M9H61_09125 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M9H61_09130 PF01618 MotA/TolQ/ExbB proton channel family M9H61_09135 PF02954 Bacterial regulatory protein, Fis family M9H61_09135 PF00158 Sigma-54 interaction domain M9H61_09140 PF00771 FHIPEP family M9H61_09150 PF10609 NUBPL iron-transfer P-loop NTPase M9H61_09165 PF13640 2OG-Fe(II) oxygenase superfamily M9H61_09165 PF18331 PKHD-type hydroxylase C-terminal domain M9H61_09170 PF00005 ABC transporter M9H61_09175 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_09180 PF13416 Bacterial extracellular solute-binding protein M9H61_09185 PF03741 Integral membrane protein TerC family M9H61_09200 PF18269 T3SS EscN ATPase C-terminal domain M9H61_09200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M9H61_09200 PF02874 ATP synthase alpha/beta family, beta-barrel domain M9H61_09205 PF00072 Response regulator receiver domain M9H61_09205 PF00486 Transcriptional regulatory protein, C terminal M9H61_09230 PF00072 Response regulator receiver domain M9H61_09230 PF08769 Sporulation initiation factor Spo0A C terminal M9H61_09240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_09240 PF01584 CheW-like domain M9H61_09240 PF02895 Signal transducing histidine kinase, homodimeric domain M9H61_09240 PF01627 Hpt domain M9H61_09240 PF00072 Response regulator receiver domain M9H61_09245 PF10090 Histidine phosphotransferase C-terminal domain M9H61_09260 PF06463 Molybdenum Cofactor Synthesis C M9H61_09260 PF04055 Radical SAM superfamily M9H61_09280 PF00892 EamA-like transporter family M9H61_09285 PF00462 Glutaredoxin M9H61_09290 PF00924 Mechanosensitive ion channel M9H61_09295 PF00163 Ribosomal protein S4/S9 N-terminal domain M9H61_09295 PF01479 S4 domain M9H61_09305 PF00682 HMGL-like M9H61_09305 PF08502 LeuA allosteric (dimerisation) domain M9H61_09320 PF03992 Antibiotic biosynthesis monooxygenase M9H61_09325 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M9H61_09325 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M9H61_09330 PF04198 Putative sugar-binding domain M9H61_09335 PF00005 ABC transporter M9H61_09340 PF02653 Branched-chain amino acid transport system / permease component M9H61_09345 PF02653 Branched-chain amino acid transport system / permease component M9H61_09350 PF13407 Periplasmic binding protein domain M9H61_09355 PF00596 Class II Aldolase and Adducin N-terminal domain M9H61_09380 PF09190 DALR domain M9H61_09380 PF01406 tRNA synthetases class I (C) catalytic domain M9H61_09385 PF00749 tRNA synthetases class I (E and Q), catalytic domain M9H61_09390 PF02540 NAD synthase M9H61_09390 PF00795 Carbon-nitrogen hydrolase M9H61_09395 PF01906 Putative heavy-metal-binding M9H61_09415 PF01474 Class-II DAHP synthetase family M9H61_09430 PF09186 Domain of unknown function (DUF1949) M9H61_09430 PF01205 Uncharacterized protein family UPF0029 M9H61_09435 PF00356 Bacterial regulatory proteins, lacI family M9H61_09435 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M9H61_09440 PF01202 Shikimate kinase M9H61_09445 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_09455 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_09460 PF07992 Pyridine nucleotide-disulphide oxidoreductase M9H61_09460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M9H61_09470 PF01966 HD domain M9H61_09475 PF01507 Phosphoadenosine phosphosulfate reductase family M9H61_09485 PF02628 Cytochrome oxidase assembly protein M9H61_09490 PF01523 Putative modulator of DNA gyrase M9H61_09505 PF00211 Adenylate and Guanylate cyclase catalytic domain M9H61_09505 PF00672 HAMP domain M9H61_09510 PF01212 Beta-eliminating lyase M9H61_09515 PF01212 Beta-eliminating lyase M9H61_09520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M9H61_09525 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_09530 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_09530 PF12911 N-terminal TM domain of oligopeptide transport permease C M9H61_09535 PF00005 ABC transporter M9H61_09535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M9H61_09540 PF00005 ABC transporter M9H61_09540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M9H61_09545 PF01810 LysE type translocator M9H61_09555 PF04314 Copper chaperone PCu(A)C M9H61_09570 PF00206 Lyase M9H61_09570 PF10415 Fumarase C C-terminus M9H61_09575 PF00455 DeoR C terminal sensor domain M9H61_09575 PF08220 DeoR-like helix-turn-helix domain M9H61_09580 PF09084 NMT1/THI5 like M9H61_09585 PF00005 ABC transporter M9H61_09590 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_09595 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_09600 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M9H61_09600 PF01266 FAD dependent oxidoreductase M9H61_09605 PF04107 Glutamate-cysteine ligase family 2(GCS2) M9H61_09610 PF04452 RNA methyltransferase M9H61_09615 PF01040 UbiA prenyltransferase family M9H61_09630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_09630 PF08447 PAS fold M9H61_09630 PF13426 PAS domain M9H61_09645 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase M9H61_09655 PF01523 Putative modulator of DNA gyrase M9H61_09660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_09660 PF00672 HAMP domain M9H61_09670 PF00781 Diacylglycerol kinase catalytic domain M9H61_09680 PF13439 Glycosyltransferase Family 4 M9H61_09680 PF00534 Glycosyl transferases group 1 M9H61_09690 PF00664 ABC transporter transmembrane region M9H61_09690 PF00005 ABC transporter M9H61_09700 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M9H61_09705 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M9H61_09735 PF02601 Exonuclease VII, large subunit M9H61_09735 PF13742 OB-fold nucleic acid binding domain M9H61_09740 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M9H61_09740 PF02843 Phosphoribosylglycinamide synthetase, C domain M9H61_09740 PF02844 Phosphoribosylglycinamide synthetase, N domain M9H61_09745 PF00005 ABC transporter M9H61_09750 PF01032 FecCD transport family M9H61_09760 PF04349 Periplasmic glucan biosynthesis protein, MdoG M9H61_09765 PF06719 AraC-type transcriptional regulator N-terminus M9H61_09765 PF12833 Helix-turn-helix domain M9H61_09770 PF00106 short chain dehydrogenase M9H61_09780 PF13649 Methyltransferase domain M9H61_09790 PF14437 MafB19-like deaminase M9H61_09795 PF07722 Peptidase C26 M9H61_09800 PF00849 RNA pseudouridylate synthase M9H61_09800 PF01479 S4 domain M9H61_09830 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus M9H61_09830 PF01048 Phosphorylase superfamily M9H61_09840 PF04542 Sigma-70 region 2 M9H61_09840 PF08281 Sigma-70, region 4 M9H61_09860 PF00210 Ferritin-like domain M9H61_09865 PF00781 Diacylglycerol kinase catalytic domain M9H61_09870 PF00448 SRP54-type protein, GTPase domain M9H61_09870 PF02881 SRP54-type protein, helical bundle domain M9H61_09875 PF04055 Radical SAM superfamily M9H61_09875 PF00919 Uncharacterized protein family UPF0004 M9H61_09880 PF00990 Diguanylate cyclase, GGDEF domain M9H61_09885 PF00696 Amino acid kinase family M9H61_09890 PF01926 50S ribosome-binding GTPase M9H61_09895 PF02096 60Kd inner membrane protein M9H61_09895 PF14849 YidC periplasmic domain M9H61_09900 PF01809 Putative membrane protein insertion efficiency factor M9H61_09905 PF00825 Ribonuclease P M9H61_09910 PF00468 Ribosomal protein L34 M9H61_09920 PF13533 Biotin-lipoyl like M9H61_09925 PF00005 ABC transporter M9H61_09925 PF03412 Peptidase C39 family M9H61_09925 PF00664 ABC transporter transmembrane region M9H61_09930 PF00005 ABC transporter M9H61_09930 PF03412 Peptidase C39 family M9H61_09930 PF00664 ABC transporter transmembrane region M9H61_09935 PF01479 S4 domain M9H61_09950 PF09278 MerR, DNA binding M9H61_09950 PF00376 MerR family regulatory protein M9H61_09965 PF00183 Hsp90 protein M9H61_09970 PF01966 HD domain M9H61_10000 PF01557 Fumarylacetoacetate (FAA) hydrolase family M9H61_10005 PF00690 Cation transporter/ATPase, N-terminus M9H61_10005 PF00689 Cation transporting ATPase, C-terminus M9H61_10010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M9H61_10010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M9H61_10025 PF05958 tRNA (Uracil-5-)-methyltransferase M9H61_10030 PF00563 EAL domain M9H61_10030 PF03707 Bacterial signalling protein N terminal repeat M9H61_10030 PF00990 Diguanylate cyclase, GGDEF domain M9H61_10035 PF01769 Divalent cation transporter M9H61_10035 PF03448 MgtE intracellular N domain M9H61_10035 PF00571 CBS domain M9H61_10040 PF00390 Malic enzyme, N-terminal domain M9H61_10040 PF03949 Malic enzyme, NAD binding domain M9H61_10040 PF01515 Phosphate acetyl/butaryl transferase M9H61_10050 PF03099 Biotin/lipoate A/B protein ligase family M9H61_10055 PF17151 Periplasmic sensor domain M9H61_10055 PF00990 Diguanylate cyclase, GGDEF domain M9H61_10085 PF02469 Fasciclin domain M9H61_10095 PF00990 Diguanylate cyclase, GGDEF domain M9H61_10095 PF00072 Response regulator receiver domain M9H61_10100 PF03328 HpcH/HpaI aldolase/citrate lyase family M9H61_10105 PF00107 Zinc-binding dehydrogenase M9H61_10105 PF08240 Alcohol dehydrogenase GroES-like domain M9H61_10110 PF01638 HxlR-like helix-turn-helix M9H61_10120 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M9H61_10130 PF00753 Metallo-beta-lactamase superfamily M9H61_10130 PF12706 Beta-lactamase superfamily domain M9H61_10135 PF00005 ABC transporter M9H61_10135 PF00664 ABC transporter transmembrane region M9H61_10135 PF03412 Peptidase C39 family M9H61_10145 PF00171 Aldehyde dehydrogenase family M9H61_10150 PF00202 Aminotransferase class-III M9H61_10160 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_10165 PF00155 Aminotransferase class I and II M9H61_10165 PF00392 Bacterial regulatory proteins, gntR family M9H61_10170 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component M9H61_10175 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_10180 PF17645 Arylmalonate decarboxylase M9H61_10185 PF00291 Pyridoxal-phosphate dependent enzyme M9H61_10190 PF02423 Ornithine cyclodeaminase/mu-crystallin family M9H61_10195 PF01321 Creatinase/Prolidase N-terminal domain M9H61_10195 PF00557 Metallopeptidase family M24 M9H61_10200 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M9H61_10205 PF01037 Lrp/AsnC ligand binding domain M9H61_10210 PF00892 EamA-like transporter family M9H61_10220 PF01425 Amidase M9H61_10225 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_10235 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_10240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M9H61_10240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M9H61_10245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M9H61_10245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M9H61_10255 PF13407 Periplasmic binding protein domain M9H61_10260 PF02653 Branched-chain amino acid transport system / permease component M9H61_10265 PF00005 ABC transporter M9H61_10270 PF00356 Bacterial regulatory proteins, lacI family M9H61_10280 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M9H61_10285 PF03435 Saccharopine dehydrogenase NADP binding domain M9H61_10285 PF16653 Saccharopine dehydrogenase C-terminal domain M9H61_10290 PF01037 Lrp/AsnC ligand binding domain M9H61_10300 PF00111 2Fe-2S iron-sulfur cluster binding domain M9H61_10300 PF01799 [2Fe-2S] binding domain M9H61_10305 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M9H61_10310 PF13478 XdhC Rossmann domain M9H61_10310 PF02625 XdhC and CoxI family M9H61_10320 PF00072 Response regulator receiver domain M9H61_10320 PF00486 Transcriptional regulatory protein, C terminal M9H61_10325 PF00512 His Kinase A (phospho-acceptor) domain M9H61_10325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_10325 PF00672 HAMP domain M9H61_10330 PF03466 LysR substrate binding domain M9H61_10330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_10335 PF13416 Bacterial extracellular solute-binding protein M9H61_10340 PF00005 ABC transporter M9H61_10340 PF08402 TOBE domain M9H61_10345 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_10350 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_10355 PF00171 Aldehyde dehydrogenase family M9H61_10365 PF00005 ABC transporter M9H61_10375 PF13458 Periplasmic binding protein M9H61_10385 PF07729 FCD domain M9H61_10385 PF00392 Bacterial regulatory proteins, gntR family M9H61_10395 PF14497 Glutathione S-transferase, C-terminal domain M9H61_10395 PF02798 Glutathione S-transferase, N-terminal domain M9H61_10405 PF04209 homogentisate 1,2-dioxygenase M9H61_10410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M9H61_10415 PF01037 Lrp/AsnC ligand binding domain M9H61_10420 PF00005 ABC transporter M9H61_10425 PF00005 ABC transporter M9H61_10425 PF12399 Branched-chain amino acid ATP-binding cassette transporter M9H61_10435 PF02653 Branched-chain amino acid transport system / permease component M9H61_10445 PF01381 Helix-turn-helix M9H61_10445 PF09856 Predicted transcriptional regulator (DUF2083) M9H61_10445 PF06114 IrrE N-terminal-like domain M9H61_10450 PF00072 Response regulator receiver domain M9H61_10450 PF00486 Transcriptional regulatory protein, C terminal M9H61_10460 PF16736 Single Cache-like M9H61_10460 PF00989 PAS fold M9H61_10460 PF00512 His Kinase A (phospho-acceptor) domain M9H61_10460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_10465 PF00005 ABC transporter M9H61_10470 PF03861 ANTAR domain M9H61_10470 PF00072 Response regulator receiver domain M9H61_10475 PF07690 Major Facilitator Superfamily M9H61_10480 PF04324 BFD-like [2Fe-2S] binding domain M9H61_10480 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M9H61_10480 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M9H61_10480 PF07992 Pyridine nucleotide-disulphide oxidoreductase M9H61_10480 PF18267 Rubredoxin NAD+ reductase C-terminal domain M9H61_10485 PF00355 Rieske [2Fe-2S] domain M9H61_10490 PF04324 BFD-like [2Fe-2S] binding domain M9H61_10490 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M9H61_10490 PF00384 Molybdopterin oxidoreductase M9H61_10490 PF01568 Molydopterin dinucleotide binding domain M9H61_10495 PF10414 Sirohaem synthase dimerisation region M9H61_10495 PF14824 Sirohaem biosynthesis protein central M9H61_10495 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M9H61_10500 PF00171 Aldehyde dehydrogenase family M9H61_10535 PF00550 Phosphopantetheine attachment site M9H61_10540 PF00550 Phosphopantetheine attachment site M9H61_10550 PF00501 AMP-binding enzyme M9H61_10550 PF13193 AMP-binding enzyme C-terminal domain M9H61_10560 PF00221 Aromatic amino acid lyase M9H61_10580 PF01494 FAD binding domain M9H61_10590 PF02801 Beta-ketoacyl synthase, C-terminal domain M9H61_10590 PF00109 Beta-ketoacyl synthase, N-terminal domain M9H61_10605 PF02801 Beta-ketoacyl synthase, C-terminal domain M9H61_10605 PF00109 Beta-ketoacyl synthase, N-terminal domain M9H61_10610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M9H61_10610 PF01842 ACT domain M9H61_10610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M9H61_10615 PF01738 Dienelactone hydrolase family M9H61_10620 PF00248 Aldo/keto reductase family M9H61_10625 PF02734 DAK2 domain M9H61_10630 PF02733 Dak1 domain M9H61_10635 PF02653 Branched-chain amino acid transport system / permease component M9H61_10640 PF00005 ABC transporter M9H61_10645 PF13407 Periplasmic binding protein domain M9H61_10650 PF02653 Branched-chain amino acid transport system / permease component M9H61_10655 PF00356 Bacterial regulatory proteins, lacI family M9H61_10665 PF01494 FAD binding domain M9H61_10670 PF00465 Iron-containing alcohol dehydrogenase M9H61_10675 PF00775 Dioxygenase M9H61_10675 PF04444 Catechol dioxygenase N terminus M9H61_10680 PF00171 Aldehyde dehydrogenase family M9H61_10685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M9H61_10685 PF00205 Thiamine pyrophosphate enzyme, central domain M9H61_10685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M9H61_10695 PF00005 ABC transporter M9H61_10695 PF00664 ABC transporter transmembrane region M9H61_10700 PF00005 ABC transporter M9H61_10705 PF01032 FecCD transport family M9H61_10715 PF07715 TonB-dependent Receptor Plug Domain M9H61_10715 PF00593 TonB dependent receptor M9H61_10730 PF07702 UTRA domain M9H61_10730 PF00392 Bacterial regulatory proteins, gntR family M9H61_10735 PF01979 Amidohydrolase family M9H61_10740 PF07969 Amidohydrolase family M9H61_10745 PF00221 Aromatic amino acid lyase M9H61_10755 PF01175 Urocanase Rossmann-like domain M9H61_10755 PF17391 Urocanase N-terminal domain M9H61_10755 PF17392 Urocanase C-terminal domain M9H61_10760 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_10770 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_10775 PF00989 PAS fold M9H61_10775 PF00512 His Kinase A (phospho-acceptor) domain M9H61_10775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_10780 PF00158 Sigma-54 interaction domain M9H61_10780 PF00072 Response regulator receiver domain M9H61_10780 PF02954 Bacterial regulatory protein, Fis family M9H61_10790 PF13458 Periplasmic binding protein M9H61_10795 PF02653 Branched-chain amino acid transport system / permease component M9H61_10805 PF00005 ABC transporter M9H61_10810 PF00005 ABC transporter M9H61_10815 PF00465 Iron-containing alcohol dehydrogenase M9H61_10820 PF00171 Aldehyde dehydrogenase family M9H61_10825 PF00465 Iron-containing alcohol dehydrogenase M9H61_10840 PF09335 SNARE associated Golgi protein M9H61_10845 PF02600 Disulfide bond formation protein DsbB M9H61_10850 PF02311 AraC-like ligand binding domain M9H61_10850 PF12833 Helix-turn-helix domain M9H61_10855 PF07715 TonB-dependent Receptor Plug Domain M9H61_10855 PF00593 TonB dependent receptor M9H61_10865 PF00830 Ribosomal L28 family M9H61_10880 PF00563 EAL domain M9H61_10880 PF00990 Diguanylate cyclase, GGDEF domain M9H61_10880 PF03707 Bacterial signalling protein N terminal repeat M9H61_10890 PF03466 LysR substrate binding domain M9H61_10890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_10895 PF00749 tRNA synthetases class I (E and Q), catalytic domain M9H61_10900 PF06213 Cobalamin biosynthesis protein CobT M9H61_10900 PF11775 Cobalamin biosynthesis protein CobT VWA domain M9H61_10905 PF07728 AAA domain (dynein-related subfamily) M9H61_10905 PF08406 CbbQ/NirQ/NorQ C-terminal M9H61_10905 PF12556 Cobaltochelatase CobS subunit N terminal M9H61_10910 PF00226 DnaJ domain M9H61_10915 PF01722 BolA-like protein M9H61_10920 PF07995 Glucose / Sorbosone dehydrogenase M9H61_10940 PF00571 CBS domain M9H61_10940 PF00478 IMP dehydrogenase / GMP reductase domain M9H61_10945 PF00571 CBS domain M9H61_10945 PF03471 Transporter associated domain M9H61_10945 PF01595 Cyclin M transmembrane N-terminal domain M9H61_10950 PF01761 3-dehydroquinate synthase M9H61_10955 PF01202 Shikimate kinase M9H61_10970 PF02899 Phage integrase, N-terminal SAM-like domain M9H61_10970 PF00589 Phage integrase family M9H61_10975 PF13426 PAS domain M9H61_10975 PF00990 Diguanylate cyclase, GGDEF domain M9H61_10975 PF00563 EAL domain M9H61_10990 PF01743 Poly A polymerase head domain M9H61_10990 PF12627 Probable RNA and SrmB- binding site of polymerase A M9H61_10990 PF13735 tRNA nucleotidyltransferase domain 2 putative M9H61_11000 PF00293 NUDIX domain M9H61_11010 PF07726 ATPase family associated with various cellular activities (AAA) M9H61_11010 PF17863 AAA lid domain M9H61_11030 PF03466 LysR substrate binding domain M9H61_11030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_11035 PF13409 Glutathione S-transferase, N-terminal domain M9H61_11040 PF00430 ATP synthase B/B' CF(0) M9H61_11045 PF00430 ATP synthase B/B' CF(0) M9H61_11050 PF00137 ATP synthase subunit C M9H61_11055 PF00119 ATP synthase A chain M9H61_11060 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter M9H61_11065 PF13847 Methyltransferase domain M9H61_11070 PF02463 RecF/RecN/SMC N terminal domain M9H61_11075 PF06965 Na+/H+ antiporter 1 M9H61_11075 PF13462 Thioredoxin M9H61_11085 PF00730 HhH-GPD superfamily base excision DNA repair protein M9H61_11085 PF14815 NUDIX domain M9H61_11095 PF18755 Restriction Enzyme Adenine Methylase Associated M9H61_11095 PF01555 DNA methylase M9H61_11100 PF02608 ABC transporter substrate-binding protein PnrA-like M9H61_11105 PF00005 ABC transporter M9H61_11110 PF02653 Branched-chain amino acid transport system / permease component M9H61_11120 PF07969 Amidohydrolase family M9H61_11125 PF01613 Flavin reductase like domain M9H61_11135 PF18125 RlmM ferredoxin-like domain M9H61_11135 PF01728 FtsJ-like methyltransferase M9H61_11145 PF02910 Fumarate reductase flavoprotein C-term M9H61_11145 PF00890 FAD binding domain M9H61_11165 PF03547 Membrane transport protein M9H61_11175 PF00005 ABC transporter M9H61_11175 PF00664 ABC transporter transmembrane region M9H61_11180 PF00171 Aldehyde dehydrogenase family M9H61_11185 PF01467 Cytidylyltransferase-like M9H61_11195 PF02590 Predicted SPOUT methyltransferase M9H61_11200 PF00672 HAMP domain M9H61_11200 PF16591 Helical bimodular sensor domain M9H61_11200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_11205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_11205 PF00672 HAMP domain M9H61_11205 PF02203 Tar ligand binding domain homologue M9H61_11210 PF08220 DeoR-like helix-turn-helix domain M9H61_11210 PF00455 DeoR C terminal sensor domain M9H61_11215 PF00202 Aminotransferase class-III M9H61_11235 PF01872 RibD C-terminal domain M9H61_11240 PF03313 Serine dehydratase alpha chain M9H61_11240 PF03315 Serine dehydratase beta chain M9H61_11245 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M9H61_11245 PF01676 Metalloenzyme superfamily M9H61_11250 PF01551 Peptidase family M23 M9H61_11255 PF03572 Peptidase family S41 M9H61_11255 PF13180 PDZ domain M9H61_11265 PF00293 NUDIX domain M9H61_11275 PF13649 Methyltransferase domain M9H61_11300 PF00162 Phosphoglycerate kinase M9H61_11305 PF01678 Diaminopimelate epimerase M9H61_11315 PF00115 Cytochrome C and Quinol oxidase polypeptide I M9H61_11330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M9H61_11330 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP M9H61_11335 PF13746 4Fe-4S dicluster domain M9H61_11335 PF12801 4Fe-4S binding domain M9H61_11335 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase M9H61_11345 PF00403 Heavy-metal-associated domain M9H61_11350 PF03597 Cytochrome oxidase maturation protein cbb3-type M9H61_11355 PF00027 Cyclic nucleotide-binding domain M9H61_11355 PF00325 Bacterial regulatory proteins, crp family M9H61_11360 PF02548 Ketopantoate hydroxymethyltransferase M9H61_11365 PF02569 Pantoate-beta-alanine ligase M9H61_11370 PF02978 Signal peptide binding domain M9H61_11370 PF00448 SRP54-type protein, GTPase domain M9H61_11370 PF02881 SRP54-type protein, helical bundle domain M9H61_11375 PF00886 Ribosomal protein S16 M9H61_11380 PF05239 PRC-barrel domain M9H61_11380 PF01782 RimM N-terminal domain M9H61_11385 PF01746 tRNA (Guanine-1)-methyltransferase M9H61_11390 PF01245 Ribosomal protein L19 M9H61_11395 PF00330 Aconitase family (aconitate hydratase) M9H61_11405 PF00694 Aconitase C-terminal domain M9H61_11410 PF00180 Isocitrate/isopropylmalate dehydrogenase M9H61_11415 PF12680 SnoaL-like domain M9H61_11415 PF04542 Sigma-70 region 2 M9H61_11415 PF08281 Sigma-70, region 4 M9H61_11420 PF02627 Carboxymuconolactone decarboxylase family M9H61_11435 PF01118 Semialdehyde dehydrogenase, NAD binding domain M9H61_11435 PF02774 Semialdehyde dehydrogenase, dimerisation domain M9H61_11450 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_11455 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_11460 PF00005 ABC transporter M9H61_11460 PF08402 TOBE domain M9H61_11475 PF02080 TrkA-C domain M9H61_11475 PF03600 Citrate transporter M9H61_11485 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M9H61_11485 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M9H61_11490 PF02594 Uncharacterised ACR, YggU family COG1872 M9H61_11495 PF02325 YGGT family M9H61_11500 PF03352 Methyladenine glycosylase M9H61_11500 PF00958 GMP synthase C terminal domain M9H61_11500 PF00117 Glutamine amidotransferase class-I M9H61_11500 PF13302 Acetyltransferase (GNAT) domain M9H61_11500 PF13673 Acetyltransferase (GNAT) domain M9H61_11505 PF13439 Glycosyltransferase Family 4 M9H61_11505 PF00534 Glycosyl transferases group 1 M9H61_11510 PF00356 Bacterial regulatory proteins, lacI family M9H61_11520 PF02321 Outer membrane efflux protein M9H61_11525 PF00873 AcrB/AcrD/AcrF family M9H61_11530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M9H61_11535 PF08269 Cache domain M9H61_11535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_11545 PF00795 Carbon-nitrogen hydrolase M9H61_11550 PF00491 Arginase family M9H61_11555 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_11560 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_11565 PF00005 ABC transporter M9H61_11565 PF08402 TOBE domain M9H61_11575 PF03466 LysR substrate binding domain M9H61_11575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_11590 PF00009 Elongation factor Tu GTP binding domain M9H61_11590 PF03144 Elongation factor Tu domain 2 M9H61_11590 PF16658 Class II release factor RF3, C-terminal domain M9H61_11615 PF01758 Sodium Bile acid symporter family M9H61_11620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M9H61_11620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M9H61_11630 PF02562 PhoH-like protein M9H61_11635 PF00317 Ribonucleotide reductase, all-alpha domain M9H61_11635 PF02867 Ribonucleotide reductase, barrel domain M9H61_11635 PF03477 ATP cone domain M9H61_11640 PF00268 Ribonucleotide reductase, small chain M9H61_11645 PF16916 Dimerisation domain of Zinc Transporter M9H61_11645 PF01545 Cation efflux family M9H61_11650 PF01578 Cytochrome C assembly protein M9H61_11650 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M9H61_11660 PF00072 Response regulator receiver domain M9H61_11675 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M9H61_11680 PF02874 ATP synthase alpha/beta family, beta-barrel domain M9H61_11680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M9H61_11685 PF00231 ATP synthase M9H61_11690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M9H61_11690 PF00306 ATP synthase alpha/beta chain, C terminal domain M9H61_11690 PF02874 ATP synthase alpha/beta family, beta-barrel domain M9H61_11695 PF00213 ATP synthase delta (OSCP) subunit M9H61_11710 PF18074 Primosomal protein N C-terminal domain M9H61_11710 PF17764 3′ DNA-binding domain (3′BD) M9H61_11710 PF00270 DEAD/DEAH box helicase M9H61_11710 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M9H61_11715 PF00923 Transaldolase/Fructose-6-phosphate aldolase M9H61_11725 PF02899 Phage integrase, N-terminal SAM-like domain M9H61_11725 PF00589 Phage integrase family M9H61_11735 PF00043 Glutathione S-transferase, C-terminal domain M9H61_11735 PF13417 Glutathione S-transferase, N-terminal domain M9H61_11745 PF00120 Glutamine synthetase, catalytic domain M9H61_11750 PF02445 Quinolinate synthetase A protein M9H61_11755 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M9H61_11755 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M9H61_11760 PF00293 NUDIX domain M9H61_11765 PF12795 Mechanosensitive ion channel porin domain M9H61_11765 PF00924 Mechanosensitive ion channel M9H61_11765 PF12794 Mechanosensitive ion channel inner membrane domain 1 M9H61_11770 PF01544 CorA-like Mg2+ transporter protein M9H61_11775 PF03969 AFG1-like ATPase M9H61_11780 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M9H61_11780 PF00056 lactate/malate dehydrogenase, NAD binding domain M9H61_11785 PF00549 CoA-ligase M9H61_11785 PF08442 ATP-grasp domain M9H61_11790 PF02629 CoA binding domain M9H61_11790 PF00549 CoA-ligase M9H61_11795 PF16870 2-oxoglutarate dehydrogenase C-terminal M9H61_11795 PF02779 Transketolase, pyrimidine binding domain M9H61_11795 PF00676 Dehydrogenase E1 component M9H61_11795 PF16078 2-oxoglutarate dehydrogenase N-terminus M9H61_11800 PF00364 Biotin-requiring enzyme M9H61_11800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M9H61_11800 PF02817 e3 binding domain M9H61_11805 PF07992 Pyridine nucleotide-disulphide oxidoreductase M9H61_11805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M9H61_11810 PF02142 MGS-like domain M9H61_11820 PF00849 RNA pseudouridylate synthase M9H61_11860 PF01593 Flavin containing amine oxidoreductase M9H61_11865 PF04542 Sigma-70 region 2 M9H61_11865 PF04545 Sigma-70, region 4 M9H61_11870 PF12973 ChrR Cupin-like domain M9H61_11875 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M9H61_11900 PF00990 Diguanylate cyclase, GGDEF domain M9H61_11915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_11935 PF01274 Malate synthase M9H61_11940 PF00557 Metallopeptidase family M24 M9H61_11945 PF00563 EAL domain M9H61_11945 PF03707 Bacterial signalling protein N terminal repeat M9H61_11945 PF00990 Diguanylate cyclase, GGDEF domain M9H61_11950 PF00775 Dioxygenase M9H61_11955 PF00775 Dioxygenase M9H61_11955 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal M9H61_11960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_11960 PF03466 LysR substrate binding domain M9H61_11965 PF03458 UPF0126 domain M9H61_11970 PF07702 UTRA domain M9H61_11970 PF00392 Bacterial regulatory proteins, gntR family M9H61_11975 PF06754 Phosphonate metabolism protein PhnG M9H61_11985 PF05861 Bacterial phosphonate metabolism protein (PhnI) M9H61_11990 PF06007 Phosphonate metabolism protein PhnJ M9H61_11995 PF00005 ABC transporter M9H61_12000 PF00005 ABC transporter M9H61_12005 PF07969 Amidohydrolase family M9H61_12010 PF00591 Glycosyl transferase family, a/b domain M9H61_12010 PF02885 Glycosyl transferase family, helical bundle domain M9H61_12010 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain M9H61_12010 PF00625 Guanylate kinase M9H61_12015 PF06299 Protein of unknown function (DUF1045) M9H61_12025 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_12035 PF00005 ABC transporter M9H61_12040 PF02615 Malate/L-lactate dehydrogenase M9H61_12050 PF02028 BCCT, betaine/carnitine/choline family transporter M9H61_12065 PF00056 lactate/malate dehydrogenase, NAD binding domain M9H61_12065 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M9H61_12070 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M9H61_12070 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M9H61_12075 PF05853 beta-keto acid cleavage enzyme M9H61_12085 PF00005 ABC transporter M9H61_12090 PF12399 Branched-chain amino acid ATP-binding cassette transporter M9H61_12090 PF00005 ABC transporter M9H61_12100 PF02653 Branched-chain amino acid transport system / permease component M9H61_12105 PF13458 Periplasmic binding protein M9H61_12110 PF07729 FCD domain M9H61_12110 PF00392 Bacterial regulatory proteins, gntR family M9H61_12190 PF03743 Bacterial conjugation TrbI-like protein M9H61_12200 PF00437 Type II/IV secretion system protein M9H61_12205 PF02534 Type IV secretory system Conjugative DNA transfer M9H61_12215 PF18818 Metallopeptidase superfamily domain M9H61_12215 PF13362 Toprim domain M9H61_12215 PF08401 Domain of unknown function (DUF1738) M9H61_12225 PF03432 Relaxase/Mobilisation nuclease domain M9H61_12225 PF18821 Large polyvalent protein-associated domain 7 M9H61_12235 PF13426 PAS domain M9H61_12235 PF00512 His Kinase A (phospho-acceptor) domain M9H61_12235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_12235 PF00672 HAMP domain M9H61_12235 PF14827 Double sensory domain of two-component sensor kinase M9H61_12240 PF00145 C-5 cytosine-specific DNA methylase M9H61_12260 PF07732 Multicopper oxidase M9H61_12260 PF07731 Multicopper oxidase M9H61_12260 PF00394 Multicopper oxidase M9H61_12265 PF05275 Copper resistance protein B precursor (CopB) M9H61_12285 PF13520 Amino acid permease M9H61_12290 PF04945 YHS domain M9H61_12330 PF03009 Glycerophosphoryl diester phosphodiesterase family M9H61_12335 PF01554 MatE M9H61_12350 PF01451 Low molecular weight phosphotyrosine protein phosphatase M9H61_12355 PF03881 Fructosamine kinase M9H61_12365 PF01227 GTP cyclohydrolase I M9H61_12370 PF04379 ApaG domain M9H61_12375 PF01053 Cys/Met metabolism PLP-dependent enzyme M9H61_12380 PF09335 SNARE associated Golgi protein M9H61_12385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M9H61_12385 PF07992 Pyridine nucleotide-disulphide oxidoreductase M9H61_12385 PF00403 Heavy-metal-associated domain M9H61_12390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_12390 PF00512 His Kinase A (phospho-acceptor) domain M9H61_12390 PF00989 PAS fold M9H61_12395 PF03352 Methyladenine glycosylase M9H61_12405 PF17932 Tetracyclin repressor-like, C-terminal domain M9H61_12405 PF00440 Bacterial regulatory proteins, tetR family M9H61_12410 PF02386 Cation transport protein M9H61_12415 PF00551 Formyl transferase M9H61_12420 PF00072 Response regulator receiver domain M9H61_12420 PF00990 Diguanylate cyclase, GGDEF domain M9H61_12425 PF01118 Semialdehyde dehydrogenase, NAD binding domain M9H61_12425 PF02774 Semialdehyde dehydrogenase, dimerisation domain M9H61_12435 PF02386 Cation transport protein M9H61_12450 PF07715 TonB-dependent Receptor Plug Domain M9H61_12450 PF00593 TonB dependent receptor M9H61_12460 PF04542 Sigma-70 region 2 M9H61_12460 PF04545 Sigma-70, region 4 M9H61_12470 PF00156 Phosphoribosyl transferase domain M9H61_12505 PF03109 ABC1 family M9H61_12510 PF01209 ubiE/COQ5 methyltransferase family M9H61_12515 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M9H61_12520 PF00520 Ion transport protein M9H61_12520 PF00027 Cyclic nucleotide-binding domain M9H61_12525 PF04715 Anthranilate synthase component I, N terminal region M9H61_12525 PF00425 chorismate binding enzyme M9H61_12525 PF00117 Glutamine amidotransferase class-I M9H61_12535 PF05532 CsbD-like M9H61_12550 PF01293 Phosphoenolpyruvate carboxykinase M9H61_12575 PF07559 Flagellar basal body protein FlaE M9H61_12575 PF00460 Flagella basal body rod protein M9H61_12575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M9H61_12595 PF08281 Sigma-70, region 4 M9H61_12595 PF04542 Sigma-70 region 2 M9H61_12605 PF02465 Flagellar hook-associated protein 2 N-terminus M9H61_12605 PF07195 Flagellar hook-associated protein 2 C-terminus M9H61_12605 PF07196 Flagellin hook IN motif M9H61_12610 PF00700 Bacterial flagellin C-terminal helical region M9H61_12610 PF00669 Bacterial flagellin N-terminal helical region M9H61_12615 PF00700 Bacterial flagellin C-terminal helical region M9H61_12615 PF00669 Bacterial flagellin N-terminal helical region M9H61_12620 PF00990 Diguanylate cyclase, GGDEF domain M9H61_12620 PF00563 EAL domain M9H61_12620 PF03707 Bacterial signalling protein N terminal repeat M9H61_12635 PF00132 Bacterial transferase hexapeptide (six repeats) M9H61_12635 PF14602 Hexapeptide repeat of succinyl-transferase M9H61_12635 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M9H61_12640 PF07687 Peptidase dimerisation domain M9H61_12640 PF01546 Peptidase family M20/M25/M40 M9H61_12650 PF13417 Glutathione S-transferase, N-terminal domain M9H61_12650 PF00043 Glutathione S-transferase, C-terminal domain M9H61_12655 PF02798 Glutathione S-transferase, N-terminal domain M9H61_12660 PF03466 LysR substrate binding domain M9H61_12660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_12675 PF00293 NUDIX domain M9H61_12675 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain M9H61_12675 PF09297 NADH pyrophosphatase zinc ribbon domain M9H61_12685 PF12170 DNA polymerase III tau subunit V interacting with alpha M9H61_12685 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M9H61_12685 PF12169 DNA polymerase III subunits gamma and tau domain III M9H61_12690 PF02575 YbaB/EbfC DNA-binding family M9H61_12695 PF13662 Toprim domain M9H61_12695 PF02132 RecR protein M9H61_12700 PF01220 Dehydroquinase class II M9H61_12705 PF01261 Xylose isomerase-like TIM barrel M9H61_12705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M9H61_12710 PF00392 Bacterial regulatory proteins, gntR family M9H61_12710 PF07729 FCD domain M9H61_12715 PF08501 Shikimate dehydrogenase substrate binding domain M9H61_12715 PF01488 Shikimate / quinate 5-dehydrogenase M9H61_12715 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M9H61_12720 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_12730 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_12735 PF13545 Crp-like helix-turn-helix domain M9H61_12735 PF00027 Cyclic nucleotide-binding domain M9H61_12740 PF00211 Adenylate and Guanylate cyclase catalytic domain M9H61_12740 PF00072 Response regulator receiver domain M9H61_12765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M9H61_12765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M9H61_12770 PF00512 His Kinase A (phospho-acceptor) domain M9H61_12770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_12775 PF01966 HD domain M9H61_12785 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_12795 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_12800 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus M9H61_12800 PF08666 SAF domain M9H61_12820 PF05221 S-adenosyl-L-homocysteine hydrolase M9H61_12820 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M9H61_12825 PF05524 PEP-utilising enzyme, N-terminal M9H61_12825 PF00391 PEP-utilising enzyme, mobile domain M9H61_12825 PF02896 PEP-utilising enzyme, TIM barrel domain M9H61_12830 PF00381 PTS HPr component phosphorylation site M9H61_12835 PF03610 PTS system fructose IIA component M9H61_12835 PF03830 PTS system sorbose subfamily IIB component M9H61_12840 PF03668 P-loop ATPase protein family M9H61_12850 PF13756 Stimulus-sensing domain M9H61_12850 PF13755 Sensor N-terminal transmembrane domain M9H61_12850 PF00512 His Kinase A (phospho-acceptor) domain M9H61_12850 PF00672 HAMP domain M9H61_12850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_12855 PF00486 Transcriptional regulatory protein, C terminal M9H61_12855 PF00072 Response regulator receiver domain M9H61_12860 PF00512 His Kinase A (phospho-acceptor) domain M9H61_12860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_12860 PF02743 Cache domain M9H61_12865 PF00158 Sigma-54 interaction domain M9H61_12865 PF02954 Bacterial regulatory protein, Fis family M9H61_12865 PF00072 Response regulator receiver domain M9H61_12870 PF16868 NMT1-like family M9H61_12895 PF03466 LysR substrate binding domain M9H61_12895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_12905 PF00551 Formyl transferase M9H61_12905 PF02911 Formyl transferase, C-terminal domain M9H61_12915 PF01327 Polypeptide deformylase M9H61_12920 PF02646 RmuC family M9H61_12925 PF16177 Acetyl-coenzyme A synthetase N-terminus M9H61_12925 PF00501 AMP-binding enzyme M9H61_12925 PF13193 AMP-binding enzyme C-terminal domain M9H61_12930 PF01740 STAS domain M9H61_12930 PF00916 Sulfate permease family M9H61_12935 PF00582 Universal stress protein family M9H61_12950 PF01430 Hsp33 protein M9H61_12955 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M9H61_12955 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M9H61_12960 PF00202 Aminotransferase class-III M9H61_12965 PF01061 ABC-2 type transporter M9H61_12970 PF02631 RecX family M9H61_12975 PF03960 ArsC family M9H61_12980 PF03788 LrgA family M9H61_12985 PF04172 LrgB-like family M9H61_12990 PF08269 Cache domain M9H61_12990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_12995 PF01416 tRNA pseudouridine synthase M9H61_13000 PF00764 Arginosuccinate synthase M9H61_13010 PF01810 LysE type translocator M9H61_13015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_13015 PF03466 LysR substrate binding domain M9H61_13020 PF03401 Tripartite tricarboxylate transporter family receptor M9H61_13030 PF01970 Tripartite tricarboxylate transporter TctA family M9H61_13035 PF01546 Peptidase family M20/M25/M40 M9H61_13035 PF07687 Peptidase dimerisation domain M9H61_13040 PF00912 Transglycosylase M9H61_13040 PF00905 Penicillin binding protein transpeptidase domain M9H61_13045 PF00912 Transglycosylase M9H61_13050 PF08240 Alcohol dehydrogenase GroES-like domain M9H61_13050 PF00107 Zinc-binding dehydrogenase M9H61_13055 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_13065 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_13070 PF00392 Bacterial regulatory proteins, gntR family M9H61_13070 PF07729 FCD domain M9H61_13075 PF03786 D-mannonate dehydratase (UxuA) M9H61_13080 PF01232 Mannitol dehydrogenase Rossmann domain M9H61_13080 PF08125 Mannitol dehydrogenase C-terminal domain M9H61_13085 PF00294 pfkB family carbohydrate kinase M9H61_13090 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase M9H61_13105 PF01370 NAD dependent epimerase/dehydratase family M9H61_13135 PF08241 Methyltransferase domain M9H61_13140 PF00534 Glycosyl transferases group 1 M9H61_13140 PF00535 Glycosyl transferase family 2 M9H61_13150 PF00529 HlyD membrane-fusion protein of T1SS M9H61_13155 PF00664 ABC transporter transmembrane region M9H61_13155 PF00005 ABC transporter M9H61_13160 PF12802 MarR family M9H61_13165 PF13439 Glycosyltransferase Family 4 M9H61_13170 PF02661 Fic/DOC family M9H61_13175 PF00300 Histidine phosphatase superfamily (branch 1) M9H61_13180 PF00005 ABC transporter M9H61_13180 PF08402 TOBE domain M9H61_13185 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_13195 PF02954 Bacterial regulatory protein, Fis family M9H61_13195 PF00072 Response regulator receiver domain M9H61_13195 PF00158 Sigma-54 interaction domain M9H61_13200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_13200 PF00512 His Kinase A (phospho-acceptor) domain M9H61_13210 PF00204 DNA gyrase B M9H61_13210 PF00986 DNA gyrase B subunit, carboxyl terminus M9H61_13210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_13210 PF01751 Toprim domain M9H61_13215 PF02463 RecF/RecN/SMC N terminal domain M9H61_13220 PF02767 DNA polymerase III beta subunit, central domain M9H61_13220 PF00712 DNA polymerase III beta subunit, N-terminal domain M9H61_13220 PF02768 DNA polymerase III beta subunit, C-terminal domain M9H61_13225 PF00308 Bacterial dnaA protein M9H61_13225 PF11638 DnaA N-terminal domain M9H61_13225 PF08299 Bacterial dnaA protein helix-turn-helix M9H61_13230 PF01649 Ribosomal protein S20 M9H61_13235 PF00378 Enoyl-CoA hydratase/isomerase M9H61_13240 PF06827 Zinc finger found in FPG and IleRS M9H61_13240 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M9H61_13240 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M9H61_13245 PF01925 Sulfite exporter TauE/SafE M9H61_13250 PF07690 Major Facilitator Superfamily M9H61_13255 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M9H61_13265 PF00216 Bacterial DNA-binding protein M9H61_13270 PF01343 Peptidase family S49 M9H61_13280 PF00575 S1 RNA binding domain M9H61_13285 PF02224 Cytidylate kinase M9H61_13290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M9H61_13305 PF00392 Bacterial regulatory proteins, gntR family M9H61_13305 PF07729 FCD domain M9H61_13310 PF01557 Fumarylacetoacetate (FAA) hydrolase family M9H61_13315 PF16868 NMT1-like family M9H61_13320 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_13340 PF04143 Sulphur transport M9H61_13350 PF00117 Glutamine amidotransferase class-I M9H61_13350 PF00958 GMP synthase C terminal domain M9H61_13350 PF02540 NAD synthase M9H61_13355 PF00211 Adenylate and Guanylate cyclase catalytic domain M9H61_13360 PF00011 Hsp20/alpha crystallin family M9H61_13370 PF00753 Metallo-beta-lactamase superfamily M9H61_13370 PF12706 Beta-lactamase superfamily domain M9H61_13375 PF08447 PAS fold M9H61_13375 PF13426 PAS domain M9H61_13375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_13380 PF03692 Putative zinc- or iron-chelating domain M9H61_13385 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M9H61_13385 PF07685 CobB/CobQ-like glutamine amidotransferase domain M9H61_13390 PF02630 SCO1/SenC M9H61_13400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M9H61_13405 PF01888 CbiD M9H61_13410 PF02571 Precorrin-6x reductase CbiJ/CobK M9H61_13415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_13415 PF08269 Cache domain M9H61_13440 PF13649 Methyltransferase domain M9H61_13445 PF00043 Glutathione S-transferase, C-terminal domain M9H61_13445 PF13417 Glutathione S-transferase, N-terminal domain M9H61_13450 PF07685 CobB/CobQ-like glutamine amidotransferase domain M9H61_13455 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP M9H61_13470 PF02514 CobN/Magnesium Chelatase M9H61_13475 PF02492 CobW/HypB/UreG, nucleotide-binding domain M9H61_13475 PF07683 Cobalamin synthesis protein cobW C-terminal domain M9H61_13480 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M9H61_13495 PF02654 Cobalamin-5-phosphate synthase M9H61_13500 PF02277 Phosphoribosyltransferase M9H61_13510 PF13580 SIS domain M9H61_13515 PF01467 Cytidylyltransferase-like M9H61_13515 PF00294 pfkB family carbohydrate kinase M9H61_13525 PF03186 CobD/Cbib protein M9H61_13530 PF01903 CbiX M9H61_13535 PF02570 Precorrin-8X methylmutase M9H61_13540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M9H61_13545 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M9H61_13550 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M9H61_13555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M9H61_13560 PF14403 Circularly permuted ATP-grasp type 2 M9H61_13565 PF04168 A predicted alpha-helical domain with a conserved ER motif. M9H61_13565 PF14403 Circularly permuted ATP-grasp type 2 M9H61_13570 PF08379 Bacterial transglutaminase-like N-terminal region M9H61_13570 PF01841 Transglutaminase-like superfamily M9H61_13585 PF02632 BioY family M9H61_13590 PF06968 Biotin and Thiamin Synthesis associated domain M9H61_13590 PF04055 Radical SAM superfamily M9H61_13610 PF07690 Major Facilitator Superfamily M9H61_13615 PF00561 alpha/beta hydrolase fold M9H61_13630 PF01209 ubiE/COQ5 methyltransferase family M9H61_13640 PF01032 FecCD transport family M9H61_13645 PF00005 ABC transporter M9H61_13650 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M9H61_13655 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M9H61_13660 PF02915 Rubrerythrin M9H61_13680 PF00013 KH domain M9H61_13680 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M9H61_13680 PF01138 3' exoribonuclease family, domain 1 M9H61_13680 PF03725 3' exoribonuclease family, domain 2 M9H61_13680 PF00575 S1 RNA binding domain M9H61_13685 PF00312 Ribosomal protein S15 M9H61_13690 PF01509 TruB family pseudouridylate synthase (N terminal domain) M9H61_13690 PF16198 tRNA pseudouridylate synthase B C-terminal domain M9H61_13690 PF09157 Pseudouridine synthase II TruB, C-terminal M9H61_13695 PF02033 Ribosome-binding factor A M9H61_13700 PF00009 Elongation factor Tu GTP binding domain M9H61_13700 PF03144 Elongation factor Tu domain 2 M9H61_13700 PF11987 Translation-initiation factor 2 M9H61_13700 PF08364 Bacterial translation initiation factor IF-2 associated region M9H61_13700 PF04760 Translation initiation factor IF-2, N-terminal region M9H61_13710 PF00575 S1 RNA binding domain M9H61_13710 PF13184 NusA-like KH domain M9H61_13710 PF08529 NusA N-terminal domain M9H61_13715 PF17384 RimP C-terminal SH3 domain M9H61_13715 PF02576 RimP N-terminal domain M9H61_13720 PF01126 Heme oxygenase M9H61_13725 PF00529 HlyD membrane-fusion protein of T1SS M9H61_13725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M9H61_13730 PF00664 ABC transporter transmembrane region M9H61_13730 PF00005 ABC transporter M9H61_13740 PF07715 TonB-dependent Receptor Plug Domain M9H61_13740 PF00593 TonB dependent receptor M9H61_13750 PF04542 Sigma-70 region 2 M9H61_13750 PF08281 Sigma-70, region 4 M9H61_13755 PF02390 Putative methyltransferase M9H61_13760 PF02772 S-adenosylmethionine synthetase, central domain M9H61_13760 PF00438 S-adenosylmethionine synthetase, N-terminal domain M9H61_13760 PF02773 S-adenosylmethionine synthetase, C-terminal domain M9H61_13765 PF01381 Helix-turn-helix M9H61_13770 PF00795 Carbon-nitrogen hydrolase M9H61_13775 PF03471 Transporter associated domain M9H61_13775 PF00571 CBS domain M9H61_13780 PF02130 Uncharacterized protein family UPF0054 M9H61_13785 PF02562 PhoH-like protein M9H61_13790 PF04055 Radical SAM superfamily M9H61_13790 PF01938 TRAM domain M9H61_13790 PF00919 Uncharacterized protein family UPF0004 M9H61_13805 PF01475 Ferric uptake regulator family M9H61_13820 PF00814 Glycoprotease family M9H61_13825 PF01427 D-ala-D-ala dipeptidase M9H61_13830 PF17912 MalK OB fold domain M9H61_13830 PF00005 ABC transporter M9H61_13835 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_13840 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_13845 PF01547 Bacterial extracellular solute-binding protein M9H61_13850 PF00232 Glycosyl hydrolase family 1 M9H61_13855 PF00356 Bacterial regulatory proteins, lacI family M9H61_13860 PF02308 MgtC family M9H61_13865 PF03466 LysR substrate binding domain M9H61_13865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_13870 PF01810 LysE type translocator M9H61_13880 PF00899 ThiF family M9H61_13885 PF00291 Pyridoxal-phosphate dependent enzyme M9H61_13890 PF02082 Transcriptional regulator M9H61_13895 PF00692 dUTPase M9H61_13900 PF02441 Flavoprotein M9H61_13900 PF04127 DNA / pantothenate metabolism flavoprotein M9H61_13910 PF00881 Nitroreductase family M9H61_13915 PF00512 His Kinase A (phospho-acceptor) domain M9H61_13915 PF16736 Single Cache-like M9H61_13915 PF00989 PAS fold M9H61_13915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_13925 PF00004 ATPase family associated with various cellular activities (AAA) M9H61_13925 PF07724 AAA domain (Cdc48 subfamily) M9H61_13925 PF10431 C-terminal, D2-small domain, of ClpB protein M9H61_13930 PF00227 Proteasome subunit M9H61_13935 PF01979 Amidohydrolase family M9H61_13935 PF13382 Adenine deaminase C-terminal domain M9H61_13940 PF02661 Fic/DOC family M9H61_13945 PF00475 Imidazoleglycerol-phosphate dehydratase M9H61_13955 PF00117 Glutamine amidotransferase class-I M9H61_13960 PF00583 Acetyltransferase (GNAT) family M9H61_13965 PF00977 Histidine biosynthesis protein M9H61_13970 PF00977 Histidine biosynthesis protein M9H61_13975 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M9H61_13980 PF01230 HIT domain M9H61_13990 PF03466 LysR substrate binding domain M9H61_13990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_14000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M9H61_14010 PF03466 LysR substrate binding domain M9H61_14010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_14020 PF13673 Acetyltransferase (GNAT) domain M9H61_14040 PF01078 Magnesium chelatase, subunit ChlI M9H61_14040 PF13335 Magnesium chelatase, subunit ChlI C-terminal M9H61_14055 PF12802 MarR family M9H61_14070 PF13417 Glutathione S-transferase, N-terminal domain M9H61_14070 PF00043 Glutathione S-transferase, C-terminal domain M9H61_14080 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M9H61_14080 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M9H61_14110 PF04055 Radical SAM superfamily M9H61_14115 PF00892 EamA-like transporter family M9H61_14135 PF01381 Helix-turn-helix M9H61_14150 PF04186 FxsA cytoplasmic membrane protein M9H61_14155 PF02556 Preprotein translocase subunit SecB M9H61_14160 PF03653 Uncharacterised protein family (UPF0093) M9H61_14165 PF00762 Ferrochelatase M9H61_14170 PF01208 Uroporphyrinogen decarboxylase (URO-D) M9H61_14175 PF03618 Kinase/pyrophosphorylase M9H61_14180 PF02545 Maf-like protein M9H61_14185 PF08501 Shikimate dehydrogenase substrate binding domain M9H61_14185 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M9H61_14185 PF01488 Shikimate / quinate 5-dehydrogenase M9H61_14190 PF01121 Dephospho-CoA kinase M9H61_14195 PF00929 Exonuclease M9H61_14205 PF01713 Smr domain M9H61_14215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M9H61_14215 PF07498 Rho termination factor, N-terminal domain M9H61_14215 PF07497 Rho termination factor, RNA-binding domain M9H61_14225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_14225 PF03466 LysR substrate binding domain M9H61_14235 PF13291 ACT domain M9H61_14235 PF04607 Region found in RelA / SpoT proteins M9H61_14235 PF02824 TGS domain M9H61_14240 PF08240 Alcohol dehydrogenase GroES-like domain M9H61_14240 PF00107 Zinc-binding dehydrogenase M9H61_14245 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M9H61_14245 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M9H61_14250 PF03190 Protein of unknown function, DUF255 M9H61_14265 PF01926 50S ribosome-binding GTPase M9H61_14265 PF12631 MnmE helical domain M9H61_14265 PF10396 GTP-binding protein TrmE N-terminus M9H61_14270 PF01134 Glucose inhibited division protein A M9H61_14270 PF13932 GidA associated domain M9H61_14275 PF02527 rRNA small subunit methyltransferase G M9H61_14280 PF13614 AAA domain M9H61_14285 PF17762 HTH domain found in ParB protein M9H61_14285 PF02195 ParB-like nuclease domain M9H61_14325 PF02581 Thiamine monophosphate synthase M9H61_14330 PF01168 Alanine racemase, N-terminal domain M9H61_14335 PF00072 Response regulator receiver domain M9H61_14335 PF00486 Transcriptional regulatory protein, C terminal M9H61_14340 PF00925 GTP cyclohydrolase II M9H61_14350 PF00579 tRNA synthetases class I (W and Y) M9H61_14355 PF03023 Lipid II flippase MurJ M9H61_14360 PF08335 GlnD PII-uridylyltransferase M9H61_14360 PF01966 HD domain M9H61_14360 PF01909 Nucleotidyltransferase domain M9H61_14365 PF01624 MutS domain I M9H61_14365 PF05188 MutS domain II M9H61_14365 PF05192 MutS domain III M9H61_14365 PF05190 MutS family domain IV M9H61_14365 PF00488 MutS domain V M9H61_14375 PF03949 Malic enzyme, NAD binding domain M9H61_14375 PF01515 Phosphate acetyl/butaryl transferase M9H61_14375 PF00390 Malic enzyme, N-terminal domain M9H61_14390 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M9H61_14395 PF01106 NifU-like domain M9H61_14410 PF01661 Macro domain M9H61_14415 PF00719 Inorganic pyrophosphatase M9H61_14425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_14425 PF03466 LysR substrate binding domain M9H61_14455 PF02146 Sir2 family M9H61_14460 PF01025 GrpE M9H61_14465 PF01628 HrcA protein C terminal domain M9H61_14470 PF03725 3' exoribonuclease family, domain 2 M9H61_14470 PF01138 3' exoribonuclease family, domain 1 M9H61_14475 PF01725 Ham1 family M9H61_14480 PF06969 HemN C-terminal domain M9H61_14480 PF04055 Radical SAM superfamily M9H61_14490 PF01612 3'-5' exonuclease M9H61_14490 PF00570 HRDC domain M9H61_14495 PF00571 CBS domain M9H61_14495 PF01380 SIS domain M9H61_14510 PF00005 ABC transporter M9H61_14515 PF00309 Sigma-54 factor, Activator interacting domain (AID) M9H61_14515 PF04963 Sigma-54 factor, core binding domain M9H61_14515 PF04552 Sigma-54, DNA binding domain M9H61_14520 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M9H61_14520 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus M9H61_14525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M9H61_14530 PF07690 Major Facilitator Superfamily M9H61_14535 PF00679 Elongation factor G C-terminus M9H61_14535 PF00009 Elongation factor Tu GTP binding domain M9H61_14535 PF03144 Elongation factor Tu domain 2 M9H61_14540 PF00294 pfkB family carbohydrate kinase M9H61_14570 PF02021 Uncharacterised protein family UPF0102 M9H61_14575 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M9H61_14585 PF00730 HhH-GPD superfamily base excision DNA repair protein M9H61_14585 PF10576 Iron-sulfur binding domain of endonuclease III M9H61_14585 PF00633 Helix-hairpin-helix motif M9H61_14595 PF00012 Hsp70 protein M9H61_14600 PF00684 DnaJ central domain M9H61_14600 PF00226 DnaJ domain M9H61_14600 PF01556 DnaJ C terminal domain M9H61_14605 PF01113 Dihydrodipicolinate reductase, N-terminus M9H61_14605 PF05173 Dihydrodipicolinate reductase, C-terminus M9H61_14615 PF01367 5'-3' exonuclease, C-terminal SAM fold M9H61_14615 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M9H61_14615 PF00476 DNA polymerase family A M9H61_14615 PF01612 3'-5' exonuclease M9H61_14630 PF02875 Mur ligase family, glutamate ligase domain M9H61_14630 PF08245 Mur ligase middle domain M9H61_14635 PF01039 Carboxyl transferase domain M9H61_14635 PF17848 Acetyl-coA carboxylase zinc finger domain M9H61_14640 PF00290 Tryptophan synthase alpha chain M9H61_14645 PF00291 Pyridoxal-phosphate dependent enzyme M9H61_14655 PF00005 ABC transporter M9H61_14660 PF12146 Serine aminopeptidase, S33 M9H61_14680 PF01048 Phosphorylase superfamily M9H61_14685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M9H61_14685 PF00205 Thiamine pyrophosphate enzyme, central domain M9H61_14685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M9H61_14700 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_14700 PF12911 N-terminal TM domain of oligopeptide transport permease C M9H61_14705 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_14710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M9H61_14715 PF03069 Acetamidase/Formamidase family M9H61_14720 PF00005 ABC transporter M9H61_14720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M9H61_14735 PF02397 Bacterial sugar transferase M9H61_14740 PF00072 Response regulator receiver domain M9H61_14740 PF00196 Bacterial regulatory proteins, luxR family M9H61_14745 PF00360 Phytochrome region M9H61_14745 PF00563 EAL domain M9H61_14745 PF01590 GAF domain M9H61_14745 PF00990 Diguanylate cyclase, GGDEF domain M9H61_14755 PF00989 PAS fold M9H61_14755 PF00512 His Kinase A (phospho-acceptor) domain M9H61_14755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_14760 PF02954 Bacterial regulatory protein, Fis family M9H61_14760 PF00072 Response regulator receiver domain M9H61_14760 PF00158 Sigma-54 interaction domain M9H61_14770 PF02678 Pirin M9H61_14770 PF17954 Quercetinase C-terminal cupin domain M9H61_14775 PF03466 LysR substrate binding domain M9H61_14775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_14785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_14785 PF03466 LysR substrate binding domain M9H61_14800 PF00171 Aldehyde dehydrogenase family M9H61_14805 PF07715 TonB-dependent Receptor Plug Domain M9H61_14805 PF07660 Secretin and TonB N terminus short domain M9H61_14805 PF00593 TonB dependent receptor M9H61_14815 PF08281 Sigma-70, region 4 M9H61_14825 PF00005 ABC transporter M9H61_14825 PF08402 TOBE domain M9H61_14835 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_14840 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_14845 PF01177 Asp/Glu/Hydantoin racemase M9H61_14850 PF07729 FCD domain M9H61_14850 PF00392 Bacterial regulatory proteins, gntR family M9H61_14855 PF01925 Sulfite exporter TauE/SafE M9H61_14860 PF03401 Tripartite tricarboxylate transporter family receptor M9H61_14870 PF01970 Tripartite tricarboxylate transporter TctA family M9H61_14880 PF04349 Periplasmic glucan biosynthesis protein, MdoG M9H61_14885 PF00535 Glycosyl transferase family 2 M9H61_14895 PF00106 short chain dehydrogenase M9H61_14900 PF00378 Enoyl-CoA hydratase/isomerase M9H61_14910 PF12806 Acetyl-CoA dehydrogenase C-terminal like M9H61_14910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M9H61_14910 PF02770 Acyl-CoA dehydrogenase, middle domain M9H61_14910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M9H61_14915 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M9H61_14915 PF00378 Enoyl-CoA hydratase/isomerase M9H61_14915 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M9H61_14920 PF02803 Thiolase, C-terminal domain M9H61_14920 PF00108 Thiolase, N-terminal domain M9H61_14925 PF13411 MerR HTH family regulatory protein M9H61_14930 PF13193 AMP-binding enzyme C-terminal domain M9H61_14930 PF00501 AMP-binding enzyme M9H61_14935 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M9H61_14950 PF05433 Glycine zipper 2TM domain M9H61_14950 PF16998 17 kDa outer membrane surface antigen M9H61_14960 PF01979 Amidohydrolase family M9H61_14970 PF07690 Major Facilitator Superfamily M9H61_14980 PF07715 TonB-dependent Receptor Plug Domain M9H61_14980 PF00593 TonB dependent receptor M9H61_14985 PF05171 Haemin-degrading HemS.ChuX domain M9H61_14990 PF01497 Periplasmic binding protein M9H61_14995 PF01032 FecCD transport family M9H61_15000 PF00005 ABC transporter M9H61_15005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_15005 PF00672 HAMP domain M9H61_15005 PF17200 Single Cache domain 2 M9H61_15010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_15010 PF03466 LysR substrate binding domain M9H61_15015 PF01266 FAD dependent oxidoreductase M9H61_15020 PF00202 Aminotransferase class-III M9H61_15025 PF00171 Aldehyde dehydrogenase family M9H61_15040 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M9H61_15040 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M9H61_15050 PF02581 Thiamine monophosphate synthase M9H61_15055 PF02110 Hydroxyethylthiazole kinase family M9H61_15060 PF17674 HHH domain M9H61_15060 PF00575 S1 RNA binding domain M9H61_15060 PF09371 Tex-like protein N-terminal domain M9H61_15060 PF16921 Tex protein YqgF-like domain M9H61_15065 PF07896 Protein of unknown function (DUF1674) M9H61_15075 PF00384 Molybdopterin oxidoreductase M9H61_15080 PF00834 Ribulose-phosphate 3 epimerase family M9H61_15085 PF01189 16S rRNA methyltransferase RsmB/F M9H61_15085 PF01029 NusB family M9H61_15090 PF00953 Glycosyl transferase family 4 M9H61_15095 PF02719 Polysaccharide biosynthesis protein M9H61_15100 PF07063 Domain of unknown function (DUF1338) M9H61_15105 PF01808 AICARFT/IMPCHase bienzyme M9H61_15105 PF02142 MGS-like domain M9H61_15110 PF00296 Luciferase-like monooxygenase M9H61_15115 PF00005 ABC transporter M9H61_15120 PF01032 FecCD transport family M9H61_15125 PF01032 FecCD transport family M9H61_15130 PF01497 Periplasmic binding protein M9H61_15150 PF03900 Porphobilinogen deaminase, C-terminal domain M9H61_15150 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M9H61_15155 PF00814 Glycoprotease family M9H61_15160 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M9H61_15160 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M9H61_15165 PF03795 YCII-related domain M9H61_15185 PF13439 Glycosyltransferase Family 4 M9H61_15185 PF00534 Glycosyl transferases group 1 M9H61_15195 PF05198 Translation initiation factor IF-3, N-terminal domain M9H61_15195 PF00707 Translation initiation factor IF-3, C-terminal domain M9H61_15200 PF00072 Response regulator receiver domain M9H61_15205 PF03547 Membrane transport protein M9H61_15210 PF01632 Ribosomal protein L35 M9H61_15215 PF00453 Ribosomal protein L20 M9H61_15220 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M9H61_15220 PF01409 tRNA synthetases class II core domain (F) M9H61_15225 PF03147 Ferredoxin-fold anticodon binding domain M9H61_15225 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M9H61_15225 PF01588 Putative tRNA binding domain M9H61_15225 PF03484 tRNA synthetase B5 domain M9H61_15225 PF03483 B3/4 domain M9H61_15235 PF08446 PAS fold M9H61_15235 PF00360 Phytochrome region M9H61_15235 PF01590 GAF domain M9H61_15235 PF00512 His Kinase A (phospho-acceptor) domain M9H61_15235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_15240 PF00679 Elongation factor G C-terminus M9H61_15240 PF00009 Elongation factor Tu GTP binding domain M9H61_15240 PF06421 GTP-binding protein LepA C-terminus M9H61_15240 PF03144 Elongation factor Tu domain 2 M9H61_15250 PF03928 Haem-degrading M9H61_15255 PF01638 HxlR-like helix-turn-helix M9H61_15275 PF07992 Pyridine nucleotide-disulphide oxidoreductase M9H61_15280 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M9H61_15290 PF12804 MobA-like NTP transferase domain M9H61_15295 PF12705 PD-(D/E)XK nuclease superfamily M9H61_15300 PF12705 PD-(D/E)XK nuclease superfamily M9H61_15300 PF00580 UvrD/REP helicase N-terminal domain M9H61_15300 PF13361 UvrD-like helicase C-terminal domain M9H61_15305 PF00085 Thioredoxin M9H61_15310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_15310 PF03466 LysR substrate binding domain M9H61_15315 PF00206 Lyase M9H61_15315 PF10397 Adenylosuccinate lyase C-terminus M9H61_15320 PF03606 C4-dicarboxylate anaerobic carrier M9H61_15325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_15325 PF00672 HAMP domain M9H61_15330 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M9H61_15330 PF17854 FtsK alpha domain M9H61_15330 PF09397 Ftsk gamma domain M9H61_15330 PF01580 FtsK/SpoIIIE family M9H61_15335 PF00155 Aminotransferase class I and II M9H61_15340 PF00909 Ammonium Transporter Family M9H61_15345 PF00909 Ammonium Transporter Family M9H61_15350 PF00543 Nitrogen regulatory protein P-II M9H61_15355 PF01494 FAD binding domain M9H61_15360 PF03922 OmpW family M9H61_15370 PF03966 Trm112p-like protein M9H61_15380 PF00085 Thioredoxin M9H61_15410 PF05088 Bacterial NAD-glutamate dehydrogenase M9H61_15420 PF00529 HlyD membrane-fusion protein of T1SS M9H61_15420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M9H61_15425 PF00873 AcrB/AcrD/AcrF family M9H61_15435 PF01435 Peptidase family M48 M9H61_15445 PF01027 Inhibitor of apoptosis-promoting Bax1 M9H61_15455 PF00501 AMP-binding enzyme M9H61_15455 PF13193 AMP-binding enzyme C-terminal domain M9H61_15465 PF00005 ABC transporter M9H61_15470 PF13472 GDSL-like Lipase/Acylhydrolase family M9H61_15485 PF00248 Aldo/keto reductase family M9H61_15490 PF02678 Pirin M9H61_15490 PF05726 Pirin C-terminal cupin domain M9H61_15495 PF02834 LigT like Phosphoesterase M9H61_15500 PF14748 Pyrroline-5-carboxylate reductase dimerisation M9H61_15500 PF03807 NADP oxidoreductase coenzyme F420-dependent M9H61_15510 PF00892 EamA-like transporter family M9H61_15515 PF01047 MarR family M9H61_15530 PF00075 RNase H M9H61_15540 PF02796 Helix-turn-helix domain of resolvase M9H61_15540 PF00239 Resolvase, N terminal domain M9H61_15545 PF00580 UvrD/REP helicase N-terminal domain M9H61_15545 PF13361 UvrD-like helicase C-terminal domain M9H61_15550 PF02463 RecF/RecN/SMC N terminal domain M9H61_15565 PF00550 Phosphopantetheine attachment site M9H61_15565 PF02801 Beta-ketoacyl synthase, C-terminal domain M9H61_15565 PF00109 Beta-ketoacyl synthase, N-terminal domain M9H61_15565 PF08659 KR domain M9H61_15565 PF08240 Alcohol dehydrogenase GroES-like domain M9H61_15565 PF00698 Acyl transferase domain M9H61_15565 PF14765 Polyketide synthase dehydratase M9H61_15565 PF16197 Ketoacyl-synthetase C-terminal extension M9H61_15580 PF03466 LysR substrate binding domain M9H61_15580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_15585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M9H61_15590 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_15595 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_15595 PF12911 N-terminal TM domain of oligopeptide transport permease C M9H61_15600 PF00005 ABC transporter M9H61_15600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M9H61_15610 PF01810 LysE type translocator M9H61_15620 PF00883 Cytosol aminopeptidase family, catalytic domain M9H61_15620 PF02789 Cytosol aminopeptidase family, N-terminal domain M9H61_15625 PF00756 Putative esterase M9H61_15635 PF03167 Uracil DNA glycosylase superfamily M9H61_15640 PF01329 Pterin 4 alpha carbinolamine dehydratase M9H61_15645 PF00106 short chain dehydrogenase M9H61_15660 PF00892 EamA-like transporter family M9H61_15665 PF01037 Lrp/AsnC ligand binding domain M9H61_15670 PF03471 Transporter associated domain M9H61_15670 PF00999 Sodium/hydrogen exchanger family M9H61_15670 PF02080 TrkA-C domain M9H61_15685 PF01810 LysE type translocator M9H61_15695 PF00459 Inositol monophosphatase family M9H61_15700 PF00034 Cytochrome c M9H61_15705 PF02348 Cytidylyltransferase M9H61_15715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_15715 PF08269 Cache domain M9H61_15720 PF00270 DEAD/DEAH box helicase M9H61_15720 PF00271 Helicase conserved C-terminal domain M9H61_15745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M9H61_15745 PF02770 Acyl-CoA dehydrogenase, middle domain M9H61_15745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M9H61_15750 PF00108 Thiolase, N-terminal domain M9H61_15750 PF02803 Thiolase, C-terminal domain M9H61_15755 PF00484 Carbonic anhydrase M9H61_15760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M9H61_15760 PF02770 Acyl-CoA dehydrogenase, middle domain M9H61_15760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M9H61_15765 PF04303 PrpF protein M9H61_15775 PF02954 Bacterial regulatory protein, Fis family M9H61_15775 PF00158 Sigma-54 interaction domain M9H61_15780 PF04012 PspA/IM30 family M9H61_15795 PF13173 AAA domain M9H61_15795 PF13635 Domain of unknown function (DUF4143) M9H61_15810 PF00144 Beta-lactamase M9H61_15820 PF01047 MarR family M9H61_15835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M9H61_15835 PF00529 HlyD membrane-fusion protein of T1SS M9H61_15840 PF03328 HpcH/HpaI aldolase/citrate lyase family M9H61_15845 PF01575 MaoC like domain M9H61_15850 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M9H61_15860 PF00890 FAD binding domain M9H61_15860 PF02910 Fumarate reductase flavoprotein C-term M9H61_15865 PF13085 2Fe-2S iron-sulfur cluster binding domain M9H61_15875 PF13419 Haloacid dehalogenase-like hydrolase M9H61_15880 PF04115 Ureidoglycolate lyase M9H61_15885 PF03561 Allantoicase repeat M9H61_15890 PF09349 OHCU decarboxylase M9H61_15890 PF01014 Uricase M9H61_15900 PF00576 HIUase/Transthyretin family M9H61_15905 PF01799 [2Fe-2S] binding domain M9H61_15905 PF00111 2Fe-2S iron-sulfur cluster binding domain M9H61_15910 PF00034 Cytochrome c M9H61_15910 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M9H61_15910 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M9H61_15920 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M9H61_15925 PF00005 ABC transporter M9H61_15940 PF02608 ABC transporter substrate-binding protein PnrA-like M9H61_15965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_15970 PF00850 Histone deacetylase domain M9H61_15975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_15975 PF03466 LysR substrate binding domain M9H61_15990 PF03466 LysR substrate binding domain M9H61_15990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_16000 PF02653 Branched-chain amino acid transport system / permease component M9H61_16010 PF00005 ABC transporter M9H61_16010 PF12399 Branched-chain amino acid ATP-binding cassette transporter M9H61_16015 PF00005 ABC transporter M9H61_16020 PF01774 UreD urease accessory protein M9H61_16025 PF00547 Urease, gamma subunit M9H61_16030 PF00699 Urease beta subunit M9H61_16035 PF00449 Urease alpha-subunit, N-terminal domain M9H61_16035 PF01979 Amidohydrolase family M9H61_16040 PF02814 UreE urease accessory protein, N-terminal domain M9H61_16040 PF05194 UreE urease accessory protein, C-terminal domain M9H61_16045 PF01730 UreF M9H61_16050 PF02492 CobW/HypB/UreG, nucleotide-binding domain M9H61_16065 PF02632 BioY family M9H61_16070 PF00005 ABC transporter M9H61_16075 PF02361 Cobalt transport protein M9H61_16080 PF00756 Putative esterase M9H61_16085 PF08240 Alcohol dehydrogenase GroES-like domain M9H61_16085 PF00107 Zinc-binding dehydrogenase M9H61_16090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_16090 PF03466 LysR substrate binding domain M9H61_16100 PF02350 UDP-N-acetylglucosamine 2-epimerase M9H61_16110 PF08241 Methyltransferase domain M9H61_16135 PF00106 short chain dehydrogenase M9H61_16140 PF00158 Sigma-54 interaction domain M9H61_16140 PF18024 Helix-turn-helix domain M9H61_16145 PF01053 Cys/Met metabolism PLP-dependent enzyme M9H61_16160 PF03448 MgtE intracellular N domain M9H61_16160 PF01769 Divalent cation transporter M9H61_16160 PF00571 CBS domain M9H61_16165 PF02615 Malate/L-lactate dehydrogenase M9H61_16170 PF01699 Sodium/calcium exchanger protein M9H61_16175 PF01914 MarC family integral membrane protein M9H61_16185 PF01435 Peptidase family M48 M9H61_16190 PF00664 ABC transporter transmembrane region M9H61_16190 PF00005 ABC transporter M9H61_16195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M9H61_16195 PF00529 HlyD membrane-fusion protein of T1SS M9H61_16205 PF01207 Dihydrouridine synthase (Dus) M9H61_16225 PF02310 B12 binding domain M9H61_16225 PF01642 Methylmalonyl-CoA mutase M9H61_16230 PF01642 Methylmalonyl-CoA mutase M9H61_16235 PF00196 Bacterial regulatory proteins, luxR family M9H61_16235 PF00072 Response regulator receiver domain M9H61_16240 PF00351 Biopterin-dependent aromatic amino acid hydroxylase M9H61_16245 PF01037 Lrp/AsnC ligand binding domain M9H61_16255 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M9H61_16260 PF08448 PAS fold M9H61_16260 PF00512 His Kinase A (phospho-acceptor) domain M9H61_16260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_16260 PF00072 Response regulator receiver domain M9H61_16260 PF13188 PAS domain M9H61_16265 PF00072 Response regulator receiver domain M9H61_16265 PF00158 Sigma-54 interaction domain M9H61_16270 PF12833 Helix-turn-helix domain M9H61_16270 PF00072 Response regulator receiver domain M9H61_16275 PF00158 Sigma-54 interaction domain M9H61_16275 PF00072 Response regulator receiver domain M9H61_16275 PF02954 Bacterial regulatory protein, Fis family M9H61_16290 PF01960 ArgJ family M9H61_16300 PF06594 Haemolysin-type calcium binding protein related domain M9H61_16300 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) M9H61_16310 PF07517 SecA DEAD-like domain M9H61_16310 PF01043 SecA preprotein cross-linking domain M9H61_16310 PF02810 SEC-C motif M9H61_16310 PF07516 SecA Wing and Scaffold domain M9H61_16320 PF00293 NUDIX domain M9H61_16325 PF02464 Competence-damaged protein M9H61_16325 PF18146 Damage-inducible protein CinA KH domain M9H61_16325 PF00994 Probable molybdopterin binding domain M9H61_16340 PF00881 Nitroreductase family M9H61_16380 PF02673 Bacitracin resistance protein BacA M9H61_16385 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M9H61_16385 PF07992 Pyridine nucleotide-disulphide oxidoreductase M9H61_16390 PF00310 Glutamine amidotransferases class-II M9H61_16390 PF04898 Glutamate synthase central domain M9H61_16390 PF01645 Conserved region in glutamate synthase M9H61_16390 PF01493 GXGXG motif M9H61_16405 PF13188 PAS domain M9H61_16405 PF08448 PAS fold M9H61_16405 PF00512 His Kinase A (phospho-acceptor) domain M9H61_16405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_16405 PF00072 Response regulator receiver domain M9H61_16410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M9H61_16425 PF01258 Prokaryotic dksA/traR C4-type zinc finger M9H61_16435 PF13545 Crp-like helix-turn-helix domain M9H61_16435 PF00027 Cyclic nucleotide-binding domain M9H61_16440 PF00072 Response regulator receiver domain M9H61_16440 PF00196 Bacterial regulatory proteins, luxR family M9H61_16445 PF17200 Single Cache domain 2 M9H61_16445 PF07730 Histidine kinase M9H61_16450 PF00289 Biotin carboxylase, N-terminal domain M9H61_16450 PF00682 HMGL-like M9H61_16450 PF02436 Conserved carboxylase domain M9H61_16450 PF02785 Biotin carboxylase C-terminal domain M9H61_16450 PF00364 Biotin-requiring enzyme M9H61_16450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M9H61_16455 PF02913 FAD linked oxidases, C-terminal domain M9H61_16455 PF01565 FAD binding domain M9H61_16460 PF01565 FAD binding domain M9H61_16465 PF02754 Cysteine-rich domain M9H61_16465 PF13183 4Fe-4S dicluster domain M9H61_16475 PF12849 PBP superfamily domain M9H61_16480 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_16485 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_16490 PF00005 ABC transporter M9H61_16495 PF01895 PhoU domain M9H61_16500 PF00072 Response regulator receiver domain M9H61_16500 PF00486 Transcriptional regulatory protein, C terminal M9H61_16505 PF00999 Sodium/hydrogen exchanger family M9H61_16505 PF02254 TrkA-N domain M9H61_16510 PF01699 Sodium/calcium exchanger protein M9H61_16520 PF02152 Dihydroneopterin aldolase M9H61_16525 PF01541 GIY-YIG catalytic domain M9H61_16525 PF12826 Helix-hairpin-helix motif M9H61_16525 PF08459 UvrC Helix-hairpin-helix N-terminal M9H61_16525 PF02151 UvrB/uvrC motif M9H61_16530 PF00860 Permease family M9H61_16535 PF01066 CDP-alcohol phosphatidyltransferase M9H61_16540 PF02391 MoaE protein M9H61_16560 PF00561 alpha/beta hydrolase fold M9H61_16570 PF00155 Aminotransferase class I and II M9H61_16575 PF02153 Prephenate dehydrogenase M9H61_16595 PF00392 Bacterial regulatory proteins, gntR family M9H61_16595 PF07702 UTRA domain M9H61_16600 PF03401 Tripartite tricarboxylate transporter family receptor M9H61_16640 PF00005 ABC transporter M9H61_16655 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M9H61_16655 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M9H61_16665 PF14698 Argininosuccinate lyase C-terminal M9H61_16665 PF00206 Lyase M9H61_16670 PF08534 Redoxin M9H61_16675 PF00294 pfkB family carbohydrate kinase M9H61_16680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M9H61_16680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M9H61_16685 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M9H61_16685 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M9H61_16690 PF00766 Electron transfer flavoprotein FAD-binding domain M9H61_16690 PF01012 Electron transfer flavoprotein domain M9H61_16695 PF01012 Electron transfer flavoprotein domain M9H61_16700 PF01923 Cobalamin adenosyltransferase M9H61_16710 PF01590 GAF domain M9H61_16710 PF00158 Sigma-54 interaction domain M9H61_16720 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_16725 PF00005 ABC transporter M9H61_16730 PF02560 Cyanate lyase C-terminal domain M9H61_16735 PF02798 Glutathione S-transferase, N-terminal domain M9H61_16735 PF00043 Glutathione S-transferase, C-terminal domain M9H61_16740 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M9H61_16740 PF05221 S-adenosyl-L-homocysteine hydrolase M9H61_16745 PF12729 Four helix bundle sensory module for signal transduction M9H61_16745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_16745 PF00672 HAMP domain M9H61_16750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M9H61_16750 PF02770 Acyl-CoA dehydrogenase, middle domain M9H61_16750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M9H61_16755 PF08240 Alcohol dehydrogenase GroES-like domain M9H61_16755 PF00107 Zinc-binding dehydrogenase M9H61_16760 PF01642 Methylmalonyl-CoA mutase M9H61_16760 PF02310 B12 binding domain M9H61_16770 PF03707 Bacterial signalling protein N terminal repeat M9H61_16770 PF00990 Diguanylate cyclase, GGDEF domain M9H61_16770 PF00563 EAL domain M9H61_16775 PF00075 RNase H M9H61_16780 PF01636 Phosphotransferase enzyme family M9H61_16785 PF02401 LytB protein M9H61_16795 PF01571 Aminomethyltransferase folate-binding domain M9H61_16795 PF08669 Glycine cleavage T-protein C-terminal barrel domain M9H61_16800 PF01597 Glycine cleavage H-protein M9H61_16805 PF02347 Glycine cleavage system P-protein M9H61_16810 PF00266 Aminotransferase class-V M9H61_16825 PF00462 Glutaredoxin M9H61_16825 PF08534 Redoxin M9H61_16830 PF11412 Disulphide bond corrector protein DsbC M9H61_16830 PF02683 Cytochrome C biogenesis protein transmembrane region M9H61_16835 PF02622 Uncharacterized ACR, COG1678 M9H61_16845 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M9H61_16845 PF02790 Cytochrome C oxidase subunit II, transmembrane domain M9H61_16850 PF00115 Cytochrome C and Quinol oxidase polypeptide I M9H61_16855 PF01040 UbiA prenyltransferase family M9H61_16865 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 M9H61_16870 PF00510 Cytochrome c oxidase subunit III M9H61_16880 PF02104 SURF1 family M9H61_16885 PF02074 Carboxypeptidase Taq (M32) metallopeptidase M9H61_16890 PF13545 Crp-like helix-turn-helix domain M9H61_16890 PF00027 Cyclic nucleotide-binding domain M9H61_16895 PF14821 Threonine synthase N terminus M9H61_16895 PF00291 Pyridoxal-phosphate dependent enzyme M9H61_16900 PF05193 Peptidase M16 inactive domain M9H61_16900 PF00675 Insulinase (Peptidase family M16) M9H61_16905 PF00480 ROK family M9H61_16910 PF03932 CutC family M9H61_16915 PF00990 Diguanylate cyclase, GGDEF domain M9H61_16925 PF08544 GHMP kinases C terminal M9H61_16925 PF00288 GHMP kinases N terminal domain M9H61_16940 PF07687 Peptidase dimerisation domain M9H61_16940 PF01546 Peptidase family M20/M25/M40 M9H61_16955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_16955 PF03466 LysR substrate binding domain M9H61_16960 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M9H61_16960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M9H61_16965 PF00171 Aldehyde dehydrogenase family M9H61_16975 PF03167 Uracil DNA glycosylase superfamily M9H61_16980 PF01464 Transglycosylase SLT domain M9H61_16995 PF03918 Cytochrome C biogenesis protein M9H61_17000 PF08534 Redoxin M9H61_17005 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M9H61_17005 PF01578 Cytochrome C assembly protein M9H61_17010 PF03100 CcmE M9H61_17020 PF01578 Cytochrome C assembly protein M9H61_17025 PF03379 CcmB protein M9H61_17030 PF00005 ABC transporter M9H61_17040 PF00209 Sodium:neurotransmitter symporter family M9H61_17045 PF00990 Diguanylate cyclase, GGDEF domain M9H61_17045 PF00563 EAL domain M9H61_17045 PF03707 Bacterial signalling protein N terminal repeat M9H61_17050 PF00330 Aconitase family (aconitate hydratase) M9H61_17050 PF00694 Aconitase C-terminal domain M9H61_17055 PF00005 ABC transporter M9H61_17055 PF12399 Branched-chain amino acid ATP-binding cassette transporter M9H61_17060 PF00501 AMP-binding enzyme M9H61_17065 PF02653 Branched-chain amino acid transport system / permease component M9H61_17080 PF00005 ABC transporter M9H61_17085 PF14535 AMP-binding enzyme C-terminal domain M9H61_17085 PF00501 AMP-binding enzyme M9H61_17090 PF03773 Predicted permease M9H61_17110 PF13244 Domain of unknown function (DUF4040) M9H61_17110 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M9H61_17110 PF00361 Proton-conducting membrane transporter M9H61_17110 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M9H61_17115 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M9H61_17120 PF00361 Proton-conducting membrane transporter M9H61_17125 PF01899 Na+/H+ ion antiporter subunit M9H61_17130 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M9H61_17135 PF03334 Na+/H+ antiporter subunit M9H61_17140 PF01351 Ribonuclease HII M9H61_17150 PF00472 RF-1 domain M9H61_17155 PF04304 Protein of unknown function (DUF454) M9H61_17165 PF08446 PAS fold M9H61_17165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_17165 PF00360 Phytochrome region M9H61_17165 PF01590 GAF domain M9H61_17165 PF00512 His Kinase A (phospho-acceptor) domain M9H61_17175 PF00072 Response regulator receiver domain M9H61_17180 PF03707 Bacterial signalling protein N terminal repeat M9H61_17180 PF00990 Diguanylate cyclase, GGDEF domain M9H61_17180 PF00563 EAL domain M9H61_17185 PF00037 4Fe-4S binding domain M9H61_17185 PF11953 Domain of unknown function (DUF3470) M9H61_17200 PF01435 Peptidase family M48 M9H61_17210 PF00561 alpha/beta hydrolase fold M9H61_17225 PF04209 homogentisate 1,2-dioxygenase M9H61_17240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_17240 PF03466 LysR substrate binding domain M9H61_17245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M9H61_17245 PF02770 Acyl-CoA dehydrogenase, middle domain M9H61_17245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M9H61_17250 PF02515 CoA-transferase family III M9H61_17255 PF08402 TOBE domain M9H61_17255 PF00005 ABC transporter M9H61_17260 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_17265 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_17270 PF13416 Bacterial extracellular solute-binding protein M9H61_17280 PF02558 Ketopantoate reductase PanE/ApbA M9H61_17280 PF08546 Ketopantoate reductase PanE/ApbA C terminal M9H61_17310 PF02311 AraC-like ligand binding domain M9H61_17310 PF12833 Helix-turn-helix domain M9H61_17320 PF00149 Calcineurin-like phosphoesterase M9H61_17320 PF02872 5'-nucleotidase, C-terminal domain M9H61_17335 PF01642 Methylmalonyl-CoA mutase M9H61_17335 PF02310 B12 binding domain M9H61_17355 PF13188 PAS domain M9H61_17355 PF03707 Bacterial signalling protein N terminal repeat M9H61_17355 PF00990 Diguanylate cyclase, GGDEF domain M9H61_17355 PF00563 EAL domain M9H61_17360 PF01551 Peptidase family M23 M9H61_17370 PF01209 ubiE/COQ5 methyltransferase family M9H61_17375 PF01575 MaoC like domain M9H61_17380 PF01687 Riboflavin kinase M9H61_17380 PF06574 FAD synthetase M9H61_17385 PF08264 Anticodon-binding domain of tRNA M9H61_17385 PF00133 tRNA synthetases class I (I, L, M and V) M9H61_17390 PF01252 Signal peptidase (SPase) II M9H61_17400 PF00675 Insulinase (Peptidase family M16) M9H61_17400 PF05193 Peptidase M16 inactive domain M9H61_17405 PF05193 Peptidase M16 inactive domain M9H61_17410 PF01119 DNA mismatch repair protein, C-terminal domain M9H61_17410 PF08676 MutL C terminal dimerisation domain M9H61_17420 PF13677 Membrane MotB of proton-channel complex MotA/MotB M9H61_17420 PF00691 OmpA family M9H61_17425 PF01618 MotA/TolQ/ExbB proton channel family M9H61_17445 PF00950 ABC 3 transport family M9H61_17450 PF00950 ABC 3 transport family M9H61_17455 PF00005 ABC transporter M9H61_17460 PF01297 Zinc-uptake complex component A periplasmic M9H61_17465 PF02742 Iron dependent repressor, metal binding and dimerisation domain M9H61_17465 PF01325 Iron dependent repressor, N-terminal DNA binding domain M9H61_17480 PF00534 Glycosyl transferases group 1 M9H61_17480 PF13439 Glycosyltransferase Family 4 M9H61_17495 PF00733 Asparagine synthase M9H61_17495 PF13537 Glutamine amidotransferase domain M9H61_17500 PF00117 Glutamine amidotransferase class-I M9H61_17505 PF00977 Histidine biosynthesis protein M9H61_17515 PF02350 UDP-N-acetylglucosamine 2-epimerase M9H61_17520 PF02350 UDP-N-acetylglucosamine 2-epimerase M9H61_17525 PF03102 NeuB family M9H61_17525 PF08666 SAF domain M9H61_17535 PF02348 Cytidylyltransferase M9H61_17540 PF00483 Nucleotidyl transferase M9H61_17560 PF02350 UDP-N-acetylglucosamine 2-epimerase M9H61_17565 PF08666 SAF domain M9H61_17565 PF03102 NeuB family M9H61_17570 PF00664 ABC transporter transmembrane region M9H61_17570 PF00005 ABC transporter M9H61_17580 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M9H61_17580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M9H61_17580 PF01842 ACT domain M9H61_17600 PF16363 GDP-mannose 4,6 dehydratase M9H61_17605 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M9H61_17615 PF00534 Glycosyl transferases group 1 M9H61_17615 PF00862 Sucrose synthase M9H61_17620 PF13472 GDSL-like Lipase/Acylhydrolase family M9H61_17620 PF02348 Cytidylyltransferase M9H61_17630 PF00829 Ribosomal prokaryotic L21 protein M9H61_17635 PF01016 Ribosomal L27 protein M9H61_17640 PF01926 50S ribosome-binding GTPase M9H61_17640 PF01018 GTP1/OBG M9H61_17645 PF01472 PUA domain M9H61_17645 PF00696 Amino acid kinase family M9H61_17655 PF01381 Helix-turn-helix M9H61_17670 PF05233 PHB accumulation regulatory domain M9H61_17670 PF07879 PHB/PHA accumulation regulator DNA-binding domain M9H61_17680 PF00561 alpha/beta hydrolase fold M9H61_17690 PF01037 Lrp/AsnC ligand binding domain M9H61_17700 PF07731 Multicopper oxidase M9H61_17700 PF00394 Multicopper oxidase M9H61_17700 PF07732 Multicopper oxidase M9H61_17710 PF00108 Thiolase, N-terminal domain M9H61_17710 PF02803 Thiolase, C-terminal domain M9H61_17725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_17725 PF03466 LysR substrate binding domain M9H61_17735 PF00005 ABC transporter M9H61_17740 PF02653 Branched-chain amino acid transport system / permease component M9H61_17745 PF13407 Periplasmic binding protein domain M9H61_17755 PF16123 Hydroxyacylglutathione hydrolase C-terminus M9H61_17755 PF00753 Metallo-beta-lactamase superfamily M9H61_17770 PF01810 LysE type translocator M9H61_17775 PF02167 Cytochrome C1 family M9H61_17780 PF00033 Cytochrome b/b6/petB M9H61_17780 PF00032 Cytochrome b(C-terminal)/b6/petD M9H61_17785 PF00355 Rieske [2Fe-2S] domain M9H61_17785 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal M9H61_17790 PF00588 SpoU rRNA Methylase family M9H61_17795 PF01218 Coproporphyrinogen III oxidase M9H61_17810 PF00106 short chain dehydrogenase M9H61_17820 PF01063 Amino-transferase class IV M9H61_17825 PF12802 MarR family M9H61_17830 PF00072 Response regulator receiver domain M9H61_17830 PF00486 Transcriptional regulatory protein, C terminal M9H61_17835 PF00672 HAMP domain M9H61_17835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_17835 PF00512 His Kinase A (phospho-acceptor) domain M9H61_17850 PF00970 Oxidoreductase FAD-binding domain M9H61_17850 PF00175 Oxidoreductase NAD-binding domain M9H61_17855 PF08447 PAS fold M9H61_17855 PF13426 PAS domain M9H61_17855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_17860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_17860 PF08447 PAS fold M9H61_17860 PF13426 PAS domain M9H61_17865 PF01588 Putative tRNA binding domain M9H61_17880 PF14748 Pyrroline-5-carboxylate reductase dimerisation M9H61_17880 PF03807 NADP oxidoreductase coenzyme F420-dependent M9H61_17895 PF01370 NAD dependent epimerase/dehydratase family M9H61_17900 PF01790 Prolipoprotein diacylglyceryl transferase M9H61_17910 PF02578 Multi-copper polyphenol oxidoreductase laccase M9H61_17920 PF14572 Phosphoribosyl synthetase-associated domain M9H61_17920 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M9H61_17925 PF14693 Ribosomal protein TL5, C-terminal domain M9H61_17925 PF01386 Ribosomal L25p family M9H61_17930 PF01195 Peptidyl-tRNA hydrolase M9H61_17935 PF06071 Protein of unknown function (DUF933) M9H61_17935 PF01926 50S ribosome-binding GTPase M9H61_17940 PF00117 Glutamine amidotransferase class-I M9H61_17940 PF00958 GMP synthase C terminal domain M9H61_17945 PF00005 ABC transporter M9H61_17945 PF10649 Protein of unknown function (DUF2478) M9H61_17945 PF03459 TOBE domain M9H61_17950 PF08240 Alcohol dehydrogenase GroES-like domain M9H61_17950 PF00107 Zinc-binding dehydrogenase M9H61_17960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_17960 PF03466 LysR substrate binding domain M9H61_17965 PF00578 AhpC/TSA family M9H61_17970 PF02627 Carboxymuconolactone decarboxylase family M9H61_17980 PF00155 Aminotransferase class I and II M9H61_17985 PF02151 UvrB/uvrC motif M9H61_17985 PF12344 Ultra-violet resistance protein B M9H61_17985 PF17757 UvrB interaction domain M9H61_17985 PF00271 Helicase conserved C-terminal domain M9H61_17985 PF04851 Type III restriction enzyme, res subunit M9H61_17995 PF01566 Natural resistance-associated macrophage protein M9H61_18000 PF00174 Oxidoreductase molybdopterin binding domain M9H61_18005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_18005 PF03466 LysR substrate binding domain M9H61_18010 PF07286 Protein of unknown function (DUF1445) M9H61_18025 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_18035 PF01425 Amidase M9H61_18040 PF00210 Ferritin-like domain M9H61_18045 PF03764 Elongation factor G, domain IV M9H61_18045 PF14492 Elongation Factor G, domain II M9H61_18045 PF00679 Elongation factor G C-terminus M9H61_18045 PF00009 Elongation factor Tu GTP binding domain M9H61_18050 PF02743 Cache domain M9H61_18050 PF00211 Adenylate and Guanylate cyclase catalytic domain M9H61_18050 PF00672 HAMP domain M9H61_18055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_18055 PF03466 LysR substrate binding domain M9H61_18060 PF07992 Pyridine nucleotide-disulphide oxidoreductase M9H61_18065 PF01037 Lrp/AsnC ligand binding domain M9H61_18075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_18080 PF01272 Transcription elongation factor, GreA/GreB, C-term M9H61_18080 PF03449 Transcription elongation factor, N-terminal M9H61_18085 PF02142 MGS-like domain M9H61_18085 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M9H61_18085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M9H61_18090 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M9H61_18090 PF00117 Glutamine amidotransferase class-I M9H61_18100 PF13662 Toprim domain M9H61_18100 PF10410 DnaB-helicase binding domain of primase M9H61_18100 PF01807 CHC2 zinc finger M9H61_18100 PF08278 DNA primase DnaG DnaB-binding M9H61_18100 PF08275 DNA primase catalytic core, N-terminal domain M9H61_18105 PF04546 Sigma-70, non-essential region M9H61_18105 PF03979 Sigma-70 factor, region 1.1 M9H61_18105 PF00140 Sigma-70 factor, region 1.2 M9H61_18105 PF04542 Sigma-70 region 2 M9H61_18105 PF04545 Sigma-70, region 4 M9H61_18105 PF04539 Sigma-70 region 3 M9H61_18135 PF07690 Major Facilitator Superfamily M9H61_18140 PF14710 Respiratory nitrate reductase alpha N-terminal M9H61_18140 PF00384 Molybdopterin oxidoreductase M9H61_18140 PF01568 Molydopterin dinucleotide binding domain M9H61_18145 PF14711 Respiratory nitrate reductase beta C-terminal M9H61_18145 PF13247 4Fe-4S dicluster domain M9H61_18150 PF02613 Nitrate reductase delta subunit M9H61_18155 PF02665 Nitrate reductase gamma subunit M9H61_18160 PF09312 SurA N-terminal domain M9H61_18160 PF00639 PPIC-type PPIASE domain M9H61_18165 PF00484 Carbonic anhydrase M9H61_18175 PF01136 Peptidase family U32 M9H61_18180 PF01136 Peptidase family U32 M9H61_18190 PF04405 Domain of Unknown function (DUF542) M9H61_18190 PF01814 Hemerythrin HHE cation binding domain M9H61_18200 PF00027 Cyclic nucleotide-binding domain M9H61_18200 PF13545 Crp-like helix-turn-helix domain M9H61_18210 PF05573 NosL M9H61_18215 PF12679 ABC-2 family transporter protein M9H61_18220 PF00005 ABC transporter M9H61_18225 PF05048 Periplasmic copper-binding protein (NosD) M9H61_18230 PF13473 Cupredoxin-like domain M9H61_18230 PF18764 Nitrous oxide reductase propeller repeat M9H61_18230 PF18793 Nitrous oxide reductase propeller repeat 2 M9H61_18235 PF04205 FMN-binding domain M9H61_18235 PF12801 4Fe-4S binding domain M9H61_18245 PF00753 Metallo-beta-lactamase superfamily M9H61_18260 PF12833 Helix-turn-helix domain M9H61_18260 PF12852 Cupin M9H61_18265 PF02627 Carboxymuconolactone decarboxylase family M9H61_18270 PF07690 Major Facilitator Superfamily M9H61_18275 PF00106 short chain dehydrogenase M9H61_18280 PF00106 short chain dehydrogenase M9H61_18285 PF01965 DJ-1/PfpI family M9H61_18285 PF12833 Helix-turn-helix domain M9H61_18305 PF03466 LysR substrate binding domain M9H61_18305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_18310 PF08240 Alcohol dehydrogenase GroES-like domain M9H61_18310 PF00107 Zinc-binding dehydrogenase M9H61_18330 PF01799 [2Fe-2S] binding domain M9H61_18330 PF00111 2Fe-2S iron-sulfur cluster binding domain M9H61_18335 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M9H61_18340 PF13478 XdhC Rossmann domain M9H61_18340 PF02625 XdhC and CoxI family M9H61_18345 PF12804 MobA-like NTP transferase domain M9H61_18350 PF08447 PAS fold M9H61_18350 PF00989 PAS fold M9H61_18350 PF00512 His Kinase A (phospho-acceptor) domain M9H61_18350 PF13426 PAS domain M9H61_18350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_18350 PF13493 Domain of unknown function (DUF4118) M9H61_18355 PF00072 Response regulator receiver domain M9H61_18355 PF00196 Bacterial regulatory proteins, luxR family M9H61_18360 PF00196 Bacterial regulatory proteins, luxR family M9H61_18360 PF00072 Response regulator receiver domain M9H61_18365 PF17200 Single Cache domain 2 M9H61_18365 PF00672 HAMP domain M9H61_18365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_18390 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M9H61_18390 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M9H61_18395 PF09084 NMT1/THI5 like M9H61_18400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M9H61_18400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M9H61_18405 PF00111 2Fe-2S iron-sulfur cluster binding domain M9H61_18405 PF00970 Oxidoreductase FAD-binding domain M9H61_18405 PF00175 Oxidoreductase NAD-binding domain M9H61_18410 PF00355 Rieske [2Fe-2S] domain M9H61_18415 PF00171 Aldehyde dehydrogenase family M9H61_18420 PF16868 NMT1-like family M9H61_18425 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_18430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_18430 PF00672 HAMP domain M9H61_18440 PF00665 Integrase core domain M9H61_18465 PF05384 Sensor protein DegS M9H61_18465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_18465 PF07730 Histidine kinase M9H61_18475 PF00005 ABC transporter M9H61_18480 PF02653 Branched-chain amino acid transport system / permease component M9H61_18485 PF02653 Branched-chain amino acid transport system / permease component M9H61_18495 PF00356 Bacterial regulatory proteins, lacI family M9H61_18510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M9H61_18510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M9H61_18515 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M9H61_18520 PF00005 ABC transporter M9H61_18525 PF02653 Branched-chain amino acid transport system / permease component M9H61_18530 PF00005 ABC transporter M9H61_18535 PF02653 Branched-chain amino acid transport system / permease component M9H61_18555 PF01053 Cys/Met metabolism PLP-dependent enzyme M9H61_18560 PF01554 MatE M9H61_18570 PF00501 AMP-binding enzyme M9H61_18570 PF00550 Phosphopantetheine attachment site M9H61_18570 PF00668 Condensation domain M9H61_18570 PF13193 AMP-binding enzyme C-terminal domain M9H61_18575 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M9H61_18590 PF01032 FecCD transport family M9H61_18595 PF01497 Periplasmic binding protein M9H61_18600 PF00005 ABC transporter M9H61_18605 PF00593 TonB dependent receptor M9H61_18605 PF07715 TonB-dependent Receptor Plug Domain M9H61_18635 PF14579 Helix-hairpin-helix motif M9H61_18635 PF02811 PHP domain M9H61_18635 PF01336 OB-fold nucleic acid binding domain M9H61_18635 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M9H61_18635 PF07733 Bacterial DNA polymerase III alpha NTPase domain M9H61_18645 PF00072 Response regulator receiver domain M9H61_18645 PF01339 CheB methylesterase M9H61_18655 PF00486 Transcriptional regulatory protein, C terminal M9H61_18655 PF00072 Response regulator receiver domain M9H61_18660 PF00005 ABC transporter M9H61_18660 PF00664 ABC transporter transmembrane region M9H61_18665 PF00005 ABC transporter M9H61_18665 PF00664 ABC transporter transmembrane region M9H61_18670 PF00529 HlyD membrane-fusion protein of T1SS M9H61_18670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M9H61_18680 PF01627 Hpt domain M9H61_18680 PF00672 HAMP domain M9H61_18680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_18680 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M9H61_18680 PF00072 Response regulator receiver domain M9H61_18680 PF00512 His Kinase A (phospho-acceptor) domain M9H61_18685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_18685 PF03466 LysR substrate binding domain M9H61_18690 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_18700 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_18705 PF00795 Carbon-nitrogen hydrolase M9H61_18720 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_18725 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_18730 PF17912 MalK OB fold domain M9H61_18730 PF00005 ABC transporter M9H61_18730 PF03459 TOBE domain M9H61_18735 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M9H61_18735 PF13378 Enolase C-terminal domain-like M9H61_18740 PF05336 L-rhamnose mutarotase M9H61_18755 PF08666 SAF domain M9H61_18755 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus M9H61_18760 PF08666 SAF domain M9H61_18760 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus M9H61_18770 PF01557 Fumarylacetoacetate (FAA) hydrolase family M9H61_18775 PF02515 CoA-transferase family III M9H61_18790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_18790 PF03466 LysR substrate binding domain M9H61_18800 PF01970 Tripartite tricarboxylate transporter TctA family M9H61_18805 PF00180 Isocitrate/isopropylmalate dehydrogenase M9H61_18810 PF13660 Domain of unknown function (DUF4147) M9H61_18810 PF05161 MOFRL family M9H61_18815 PF00180 Isocitrate/isopropylmalate dehydrogenase M9H61_18820 PF03466 LysR substrate binding domain M9H61_18820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_18825 PF13378 Enolase C-terminal domain-like M9H61_18830 PF04909 Amidohydrolase M9H61_18850 PF04303 PrpF protein M9H61_18855 PF03737 Aldolase/RraA M9H61_18860 PF02585 GlcNAc-PI de-N-acetylase M9H61_18865 PF03466 LysR substrate binding domain M9H61_18865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_18875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M9H61_18880 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_18895 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M9H61_18895 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M9H61_18905 PF03459 TOBE domain M9H61_18905 PF00005 ABC transporter M9H61_18910 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_18935 PF00474 Sodium:solute symporter family M9H61_18945 PF12848 ABC transporter M9H61_18945 PF00005 ABC transporter M9H61_18955 PF04333 MlaA lipoprotein M9H61_18960 PF01209 ubiE/COQ5 methyltransferase family M9H61_18965 PF02219 Methylenetetrahydrofolate reductase M9H61_18970 PF02965 Vitamin B12 dependent methionine synthase, activation domain M9H61_18970 PF00809 Pterin binding enzyme M9H61_18970 PF02607 B12 binding domain M9H61_18970 PF02574 Homocysteine S-methyltransferase M9H61_18970 PF02310 B12 binding domain M9H61_18975 PF02574 Homocysteine S-methyltransferase M9H61_18975 PF00809 Pterin binding enzyme M9H61_18975 PF02310 B12 binding domain M9H61_18975 PF02607 B12 binding domain M9H61_18975 PF02965 Vitamin B12 dependent methionine synthase, activation domain M9H61_18980 PF07690 Major Facilitator Superfamily M9H61_18985 PF00654 Voltage gated chloride channel M9H61_18995 PF02350 UDP-N-acetylglucosamine 2-epimerase M9H61_19005 PF00580 UvrD/REP helicase N-terminal domain M9H61_19005 PF13361 UvrD-like helicase C-terminal domain M9H61_19015 PF01925 Sulfite exporter TauE/SafE M9H61_19020 PF00072 Response regulator receiver domain M9H61_19025 PF00512 His Kinase A (phospho-acceptor) domain M9H61_19025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_19025 PF08448 PAS fold M9H61_19025 PF13188 PAS domain M9H61_19025 PF00072 Response regulator receiver domain M9H61_19040 PF01321 Creatinase/Prolidase N-terminal domain M9H61_19040 PF00557 Metallopeptidase family M24 M9H61_19045 PF00248 Aldo/keto reductase family M9H61_19050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_19050 PF03466 LysR substrate binding domain M9H61_19055 PF00892 EamA-like transporter family M9H61_19070 PF12826 Helix-hairpin-helix motif M9H61_19070 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M9H61_19070 PF03120 NAD-dependent DNA ligase OB-fold domain M9H61_19070 PF01653 NAD-dependent DNA ligase adenylation domain M9H61_19070 PF00533 BRCA1 C Terminus (BRCT) domain M9H61_19075 PF02463 RecF/RecN/SMC N terminal domain M9H61_19080 PF13525 Outer membrane lipoprotein M9H61_19085 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M9H61_19090 PF00091 Tubulin/FtsZ family, GTPase domain M9H61_19090 PF12327 FtsZ family, C-terminal domain M9H61_19095 PF02491 SHS2 domain inserted in FTSA M9H61_19100 PF01547 Bacterial extracellular solute-binding protein M9H61_19105 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_19110 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_19115 PF17912 MalK OB fold domain M9H61_19115 PF00005 ABC transporter M9H61_19125 PF03799 Cell division protein FtsQ M9H61_19125 PF08478 POTRA domain, FtsQ-type M9H61_19130 PF07478 D-ala D-ala ligase C-terminus M9H61_19130 PF01820 D-ala D-ala ligase N-terminus M9H61_19135 PF01565 FAD binding domain M9H61_19135 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M9H61_19140 PF01225 Mur ligase family, catalytic domain M9H61_19140 PF02875 Mur ligase family, glutamate ligase domain M9H61_19140 PF08245 Mur ligase middle domain M9H61_19145 PF04101 Glycosyltransferase family 28 C-terminal domain M9H61_19145 PF03033 Glycosyltransferase family 28 N-terminal domain M9H61_19150 PF01098 Cell cycle protein M9H61_19155 PF08245 Mur ligase middle domain M9H61_19160 PF00953 Glycosyl transferase family 4 M9H61_19165 PF01225 Mur ligase family, catalytic domain M9H61_19165 PF02875 Mur ligase family, glutamate ligase domain M9H61_19165 PF08245 Mur ligase middle domain M9H61_19170 PF01225 Mur ligase family, catalytic domain M9H61_19170 PF02875 Mur ligase family, glutamate ligase domain M9H61_19170 PF08245 Mur ligase middle domain M9H61_19175 PF03717 Penicillin-binding Protein dimerisation domain M9H61_19175 PF00905 Penicillin binding protein transpeptidase domain M9H61_19185 PF01795 MraW methylase family M9H61_19190 PF02381 MraZ protein, putative antitoxin-like M9H61_19200 PF01544 CorA-like Mg2+ transporter protein M9H61_19205 PF00857 Isochorismatase family M9H61_19220 PF01510 N-acetylmuramoyl-L-alanine amidase M9H61_19230 PF16326 ABC transporter C-terminal domain M9H61_19230 PF00005 ABC transporter M9H61_19235 PF00226 DnaJ domain M9H61_19235 PF05099 Tellurite resistance protein TerB M9H61_19240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_19245 PF00672 HAMP domain M9H61_19245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M9H61_19270 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_19275 PF05378 Hydantoinase/oxoprolinase N-terminal region M9H61_19275 PF01968 Hydantoinase/oxoprolinase M9H61_19280 PF01645 Conserved region in glutamate synthase M9H61_19290 PF09857 Putative toxin of bacterial toxin-antitoxin pair M9H61_19295 PF00583 Acetyltransferase (GNAT) family M9H61_19300 PF00990 Diguanylate cyclase, GGDEF domain M9H61_19305 PF02653 Branched-chain amino acid transport system / permease component M9H61_19315 PF01565 FAD binding domain M9H61_19315 PF02913 FAD linked oxidases, C-terminal domain M9H61_19335 PF01384 Phosphate transporter family M9H61_19340 PF02592 Putative vitamin uptake transporter M9H61_19345 PF02547 Queuosine biosynthesis protein M9H61_19350 PF01702 Queuine tRNA-ribosyltransferase M9H61_19355 PF14489 QueF-like protein M9H61_19360 PF08281 Sigma-70, region 4 M9H61_19360 PF04542 Sigma-70 region 2 M9H61_19365 PF16220 Domain of unknown function (DUF4880) M9H61_19365 PF04773 FecR protein M9H61_19370 PF07715 TonB-dependent Receptor Plug Domain M9H61_19370 PF00593 TonB dependent receptor M9H61_19375 PF08331 Domain of unknown function (DUF1730) M9H61_19380 PF00149 Calcineurin-like phosphoesterase M9H61_19390 PF00733 Asparagine synthase M9H61_19390 PF13537 Glutamine amidotransferase domain M9H61_19395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_19395 PF00072 Response regulator receiver domain M9H61_19405 PF00202 Aminotransferase class-III M9H61_19410 PF05853 beta-keto acid cleavage enzyme M9H61_19415 PF16868 NMT1-like family M9H61_19425 PF00582 Universal stress protein family M9H61_19435 PF03781 Sulfatase-modifying factor enzyme 1 M9H61_19445 PF00034 Cytochrome c M9H61_19455 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M9H61_19465 PF03480 Bacterial extracellular solute-binding protein, family 7 M9H61_19480 PF00348 Polyprenyl synthetase M9H61_19490 PF17827 PrmC N-terminal domain M9H61_19490 PF13847 Methyltransferase domain M9H61_19500 PF02091 Glycyl-tRNA synthetase alpha subunit M9H61_19505 PF02092 Glycyl-tRNA synthetase beta subunit M9H61_19505 PF05746 DALR anticodon binding domain M9H61_19510 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M9H61_19510 PF02896 PEP-utilising enzyme, TIM barrel domain M9H61_19510 PF00391 PEP-utilising enzyme, mobile domain M9H61_19520 PF01571 Aminomethyltransferase folate-binding domain M9H61_19545 PF00733 Asparagine synthase M9H61_19545 PF13537 Glutamine amidotransferase domain M9H61_19550 PF06803 Protein of unknown function (DUF1232) M9H61_19555 PF00107 Zinc-binding dehydrogenase M9H61_19560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_19560 PF08447 PAS fold M9H61_19560 PF08448 PAS fold M9H61_19565 PF00072 Response regulator receiver domain M9H61_19565 PF00196 Bacterial regulatory proteins, luxR family M9H61_19575 PF01370 NAD dependent epimerase/dehydratase family M9H61_19600 PF00692 dUTPase M9H61_19605 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M9H61_19610 PF01634 ATP phosphoribosyltransferase M9H61_19615 PF00815 Histidinol dehydrogenase M9H61_19620 PF06793 Uncharacterised protein family (UPF0262) M9H61_19625 PF01451 Low molecular weight phosphotyrosine protein phosphatase M9H61_19630 PF00583 Acetyltransferase (GNAT) family M9H61_19635 PF01176 Translation initiation factor 1A / IF-1 M9H61_19640 PF02545 Maf-like protein M9H61_19645 PF00575 S1 RNA binding domain M9H61_19645 PF10150 Ribonuclease E/G family M9H61_19645 PF12111 Polyribonucleotide phosphorylase C terminal M9H61_19650 PF03884 DNA gyrase inhibitor YacG M9H61_19670 PF03441 FAD binding domain of DNA photolyase M9H61_19670 PF00875 DNA photolyase M9H61_19675 PF00155 Aminotransferase class I and II M9H61_19675 PF00392 Bacterial regulatory proteins, gntR family M9H61_19685 PF04227 Indigoidine synthase A like protein M9H61_19690 PF07690 Major Facilitator Superfamily M9H61_19695 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M9H61_19695 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M9H61_19700 PF10369 Small subunit of acetolactate synthase M9H61_19705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M9H61_19705 PF00205 Thiamine pyrophosphate enzyme, central domain M9H61_19705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M9H61_19720 PF13180 PDZ domain M9H61_19735 PF12221 Bacterial membrane protein N terminal M9H61_19735 PF01145 SPFH domain / Band 7 family M9H61_19740 PF10609 NUBPL iron-transfer P-loop NTPase M9H61_19745 PF00586 AIR synthase related protein, N-terminal domain M9H61_19745 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M9H61_19745 PF02769 AIR synthase related protein, C-terminal domain M9H61_19755 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase M9H61_19760 PF01259 SAICAR synthetase M9H61_19775 PF00196 Bacterial regulatory proteins, luxR family M9H61_19775 PF00072 Response regulator receiver domain M9H61_19780 PF06418 CTP synthase N-terminus M9H61_19780 PF00117 Glutamine amidotransferase class-I M9H61_19790 PF03466 LysR substrate binding domain M9H61_19790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_19800 PF17645 Arylmalonate decarboxylase M9H61_19805 PF07729 FCD domain M9H61_19805 PF00392 Bacterial regulatory proteins, gntR family M9H61_19810 PF10397 Adenylosuccinate lyase C-terminus M9H61_19810 PF00206 Lyase M9H61_19820 PF00005 ABC transporter M9H61_19820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M9H61_19825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M9H61_19825 PF00005 ABC transporter M9H61_19830 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_19830 PF12911 N-terminal TM domain of oligopeptide transport permease C M9H61_19835 PF00528 Binding-protein-dependent transport system inner membrane component M9H61_19840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M9H61_19855 PF07715 TonB-dependent Receptor Plug Domain M9H61_19860 PF13180 PDZ domain M9H61_19870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M9H61_19875 PF04002 RadC-like JAB domain M9H61_19880 PF00557 Metallopeptidase family M24 M9H61_19885 PF03749 Sugar fermentation stimulation protein RE domain M9H61_19885 PF17746 SfsA N-terminal OB domain M9H61_19895 PF08241 Methyltransferase domain M9H61_19905 PF02798 Glutathione S-transferase, N-terminal domain M9H61_19910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_19910 PF03466 LysR substrate binding domain M9H61_19915 PF00156 Phosphoribosyl transferase domain M9H61_19920 PF00462 Glutaredoxin M9H61_19940 PF00795 Carbon-nitrogen hydrolase M9H61_19960 PF00005 ABC transporter M9H61_19970 PF00245 Alkaline phosphatase M9H61_19975 PF05175 Methyltransferase small domain M9H61_19975 PF08468 Methyltransferase small domain N-terminal M9H61_19985 PF07536 HWE histidine kinase M9H61_19985 PF08447 PAS fold M9H61_19985 PF13426 PAS domain M9H61_19995 PF00696 Amino acid kinase family M9H61_19995 PF01842 ACT domain M9H61_19995 PF13840 ACT domain M9H61_20000 PF03060 Nitronate monooxygenase M9H61_20005 PF05524 PEP-utilising enzyme, N-terminal M9H61_20005 PF00391 PEP-utilising enzyme, mobile domain M9H61_20005 PF02896 PEP-utilising enzyme, TIM barrel domain M9H61_20005 PF01590 GAF domain M9H61_20015 PF04551 GcpE protein M9H61_20020 PF03129 Anticodon binding domain M9H61_20020 PF13393 Histidyl-tRNA synthetase M9H61_20025 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M9H61_20025 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M9H61_20025 PF01488 Shikimate / quinate 5-dehydrogenase M9H61_20030 PF03462 PCRF domain M9H61_20030 PF00472 RF-1 domain M9H61_20035 PF13847 Methyltransferase domain M9H61_20035 PF17827 PrmC N-terminal domain M9H61_20055 PF00004 ATPase family associated with various cellular activities (AAA) M9H61_20055 PF02861 Clp amino terminal domain, pathogenicity island component M9H61_20055 PF10431 C-terminal, D2-small domain, of ClpB protein M9H61_20055 PF17871 AAA lid domain M9H61_20055 PF07724 AAA domain (Cdc48 subfamily) M9H61_20070 PF00501 AMP-binding enzyme M9H61_20080 PF03109 ABC1 family M9H61_20085 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M9H61_20085 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M9H61_20090 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M9H61_20095 PF02233 NAD(P) transhydrogenase beta subunit M9H61_20105 PF01165 Ribosomal protein S21 M9H61_20115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M9H61_20115 PF00529 HlyD membrane-fusion protein of T1SS M9H61_20120 PF01327 Polypeptide deformylase M9H61_20135 PF02222 ATP-grasp domain M9H61_20135 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M9H61_20140 PF00731 AIR carboxylase M9H61_20155 PF00365 Phosphofructokinase M9H61_20165 PF02441 Flavoprotein M9H61_20175 PF16177 Acetyl-coenzyme A synthetase N-terminus M9H61_20175 PF00501 AMP-binding enzyme M9H61_20175 PF13193 AMP-binding enzyme C-terminal domain M9H61_20190 PF03466 LysR substrate binding domain M9H61_20190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_20195 PF00455 DeoR C terminal sensor domain M9H61_20195 PF08220 DeoR-like helix-turn-helix domain M9H61_20205 PF08240 Alcohol dehydrogenase GroES-like domain M9H61_20205 PF00107 Zinc-binding dehydrogenase M9H61_20205 PF00109 Beta-ketoacyl synthase, N-terminal domain M9H61_20205 PF02801 Beta-ketoacyl synthase, C-terminal domain M9H61_20205 PF08659 KR domain M9H61_20205 PF00550 Phosphopantetheine attachment site M9H61_20205 PF14765 Polyketide synthase dehydratase M9H61_20205 PF16197 Ketoacyl-synthetase C-terminal extension M9H61_20205 PF00698 Acyl transferase domain M9H61_20220 PF00211 Adenylate and Guanylate cyclase catalytic domain M9H61_20230 PF01197 Ribosomal protein L31 M9H61_20235 PF01491 Frataxin-like domain M9H61_20240 PF00664 ABC transporter transmembrane region M9H61_20240 PF00005 ABC transporter M9H61_20245 PF01551 Peptidase family M23 M9H61_20245 PF10145 Phage-related minor tail protein M9H61_20245 PF01464 Transglycosylase SLT domain M9H61_20285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M9H61_20285 PF00378 Enoyl-CoA hydratase/isomerase M9H61_20285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M9H61_20295 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M9H61_20310 PF00378 Enoyl-CoA hydratase/isomerase M9H61_20315 PF02770 Acyl-CoA dehydrogenase, middle domain M9H61_20315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M9H61_20315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M9H61_20320 PF00501 AMP-binding enzyme M9H61_20320 PF13193 AMP-binding enzyme C-terminal domain M9H61_20325 PF00266 Aminotransferase class-V M9H61_20330 PF03301 Tryptophan 2,3-dioxygenase M9H61_20340 PF02653 Branched-chain amino acid transport system / permease component M9H61_20350 PF12399 Branched-chain amino acid ATP-binding cassette transporter M9H61_20350 PF00005 ABC transporter M9H61_20355 PF00005 ABC transporter M9H61_20370 PF00158 Sigma-54 interaction domain M9H61_20370 PF02954 Bacterial regulatory protein, Fis family M9H61_20370 PF00072 Response regulator receiver domain M9H61_20375 PF08447 PAS fold M9H61_20375 PF00989 PAS fold M9H61_20375 PF00512 His Kinase A (phospho-acceptor) domain M9H61_20375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_20385 PF07690 Major Facilitator Superfamily M9H61_20390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M9H61_20390 PF03466 LysR substrate binding domain M9H61_20400 PF00037 4Fe-4S binding domain M9H61_20400 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M9H61_20400 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M9H61_20405 PF01568 Molydopterin dinucleotide binding domain M9H61_20405 PF00037 4Fe-4S binding domain M9H61_20405 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M9H61_20405 PF00384 Molybdopterin oxidoreductase M9H61_20405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M9H61_20415 PF02634 FdhD/NarQ family M9H61_20420 PF00356 Bacterial regulatory proteins, lacI family M9H61_20440 PF00920 Dehydratase family M9H61_20445 PF00701 Dihydrodipicolinate synthetase family M9H61_20450 PF00171 Aldehyde dehydrogenase family M9H61_20455 PF03737 Aldolase/RraA M9H61_20460 PF00480 ROK family M9H61_20470 PF00005 ABC transporter M9H61_20475 PF02653 Branched-chain amino acid transport system / permease component M9H61_20480 PF13407 Periplasmic binding protein domain M9H61_20490 PF00920 Dehydratase family M9H61_20495 PF02321 Outer membrane efflux protein M9H61_20500 PF12704 MacB-like periplasmic core domain M9H61_20500 PF02687 FtsX-like permease family M9H61_20500 PF00005 ABC transporter M9H61_20505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M9H61_20510 PF00072 Response regulator receiver domain M9H61_20510 PF00486 Transcriptional regulatory protein, C terminal M9H61_20515 PF00512 His Kinase A (phospho-acceptor) domain M9H61_20515 PF16527 Two-component sensor protein CpxA, periplasmic domain M9H61_20515 PF00672 HAMP domain M9H61_20515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M9H61_20520 PF00551 Formyl transferase M9H61_20525 PF00120 Glutamine synthetase, catalytic domain M9H61_20530 PF01645 Conserved region in glutamate synthase M9H61_20535 PF01493 GXGXG motif M9H61_20555 PF01571 Aminomethyltransferase folate-binding domain M9H61_20555 PF08669 Glycine cleavage T-protein C-terminal barrel domain M9H61_20565 PF00111 2Fe-2S iron-sulfur cluster binding domain M9H61_20565 PF00175 Oxidoreductase NAD-binding domain M9H61_20565 PF00970 Oxidoreductase FAD-binding domain M9H61_20580 PF01571 Aminomethyltransferase folate-binding domain M9H61_20580 PF08669 Glycine cleavage T-protein C-terminal barrel domain M9H61_20595 PF12833 Helix-turn-helix domain M9H61_20595 PF01965 DJ-1/PfpI family M9H61_20600 PF01266 FAD dependent oxidoreductase M9H61_20605 PF04267 Sarcosine oxidase, delta subunit family M9H61_20610 PF08669 Glycine cleavage T-protein C-terminal barrel domain M9H61_20610 PF01571 Aminomethyltransferase folate-binding domain M9H61_20610 PF17806 Sarcosine oxidase A3 domain M9H61_20610 PF07992 Pyridine nucleotide-disulphide oxidoreductase M9H61_20620 PF01738 Dienelactone hydrolase family M9H61_20625 PF01546 Peptidase family M20/M25/M40 M9H61_20625 PF07687 Peptidase dimerisation domain M9H61_20630 PF01513 ATP-NAD kinase