TH3_00005 SM00382 ATPases associated with a variety of cellular activities TH3_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain TH3_00010 SM00480 DNA polymerase III beta subunit TH3_00015 SM00382 ATPases associated with a variety of cellular activities TH3_00020 SM00387 Histidine kinase-like ATPases TH3_00020 SM00433 TopoisomeraseII TH3_00170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_00315 SM00382 ATPases associated with a variety of cellular activities TH3_00315 SM00448 cheY-homologous receiver domain TH3_00320 SM00387 Histidine kinase-like ATPases TH3_00320 SM00388 His Kinase A (phosphoacceptor) domain TH3_00325 SM00448 cheY-homologous receiver domain TH3_00325 SM00862 Transcriptional regulatory protein, C terminal TH3_00330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_00330 SM00387 Histidine kinase-like ATPases TH3_00330 SM00388 His Kinase A (phosphoacceptor) domain TH3_00360 SM00996 S-adenosyl-L-homocysteine hydrolase TH3_00360 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TH3_00395 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TH3_00400 SM00091 PAS domain TH3_00400 SM00387 Histidine kinase-like ATPases TH3_00400 SM00388 His Kinase A (phosphoacceptor) domain TH3_00425 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TH3_00430 SM00100 Cyclic nucleotide-monophosphate binding domain TH3_00430 SM00419 helix_turn_helix, cAMP Regulatory protein TH3_00455 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_00455 SM00895 TH3_00455 TH3_00475 SM00493 TH3_00475 TH3_00485 SM00382 ATPases associated with a variety of cellular activities TH3_00535 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. TH3_00555 SM00052 Putative diguanylate phosphodiesterase TH3_00555 SM00091 PAS domain TH3_00620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_00620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_00625 SM00028 Tetratricopeptide repeats TH3_00655 SM00859 Semialdehyde dehydrogenase, NAD binding domain TH3_00660 SM00267 diguanylate cyclase TH3_00690 SM00387 Histidine kinase-like ATPases TH3_00725 SM00226 Low molecular weight phosphatase family TH3_00730 SM00342 helix_turn_helix, arabinose operon control protein TH3_00765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_00765 SM00387 Histidine kinase-like ATPases TH3_00765 SM00388 His Kinase A (phosphoacceptor) domain TH3_00770 SM00382 ATPases associated with a variety of cellular activities TH3_00770 SM00448 cheY-homologous receiver domain TH3_00785 SM00382 ATPases associated with a variety of cellular activities TH3_00790 SM00855 Phosphoglycerate mutase family TH3_00805 SM00857 Resolvase, N terminal domain TH3_00810 SM01040 BRO family, N-terminal domain TH3_00815 SM00487 DEAD-like helicases superfamily TH3_00815 SM00490 helicase superfamily c-terminal domain TH3_00820 SM00487 DEAD-like helicases superfamily TH3_00820 SM00490 helicase superfamily c-terminal domain TH3_00840 SM00954 Region found in RelA / SpoT proteins TH3_00945 SM00382 ATPases associated with a variety of cellular activities TH3_00970 SM00530 Helix-turn-helix XRE-family like proteins TH3_01040 SM00382 ATPases associated with a variety of cellular activities TH3_01065 SM00072 Guanylate kinase homologues. TH3_01075 SM00382 ATPases associated with a variety of cellular activities TH3_01080 SM00382 ATPases associated with a variety of cellular activities TH3_01105 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_01105 SM00866 TH3_01105 TH3_01115 SM00267 diguanylate cyclase TH3_01160 SM00267 diguanylate cyclase TH3_01165 SM00028 Tetratricopeptide repeats TH3_01260 SM00506 Appr-1"-p processing enzyme TH3_01265 SM00851 MGS-like domain TH3_01290 SM00861 Transketolase, pyrimidine binding domain TH3_01295 SM00881 CoA binding domain TH3_01360 SM01230 TH3_01360 TH3_01395 SM00487 DEAD-like helicases superfamily TH3_01395 SM00490 helicase superfamily c-terminal domain TH3_01400 SM00062 Bacterial periplasmic substrate-binding proteins TH3_01430 SM00382 ATPases associated with a variety of cellular activities TH3_01440 SM00448 cheY-homologous receiver domain TH3_01445 SM00028 Tetratricopeptide repeats TH3_01475 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TH3_01480 SM00226 Low molecular weight phosphatase family TH3_01485 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TH3_01505 SM00342 helix_turn_helix, arabinose operon control protein TH3_01510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_01535 SM00354 helix_turn _helix lactose operon repressor TH3_01550 SM01152 TH3_01550 TH3_01580 SM00382 ATPases associated with a variety of cellular activities TH3_01615 SM00965 Secretin and TonB N terminus short domain TH3_01635 SM00859 Semialdehyde dehydrogenase, NAD binding domain TH3_01665 SM01329 TH3_01665 TH3_01705 SM00382 ATPases associated with a variety of cellular activities TH3_01705 SM00962 SRP54-type protein, GTPase domain TH3_01705 SM00963 SRP54-type protein, helical bundle domain TH3_01720 SM00100 Cyclic nucleotide-monophosphate binding domain TH3_01720 SM00419 helix_turn_helix, cAMP Regulatory protein TH3_01825 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TH3_01825 SM00245 tail specific protease TH3_01875 SM00382 ATPases associated with a variety of cellular activities TH3_01890 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TH3_01890 SM00267 diguanylate cyclase TH3_01895 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TH3_01895 SM00267 diguanylate cyclase TH3_01925 SM00903 Flavin reductase like domain TH3_01945 SM00382 ATPases associated with a variety of cellular activities TH3_01965 SM00478 endonuclease III TH3_01965 SM00525 TH3_01965 TH3_02040 SM00382 ATPases associated with a variety of cellular activities TH3_02075 SM00052 Putative diguanylate phosphodiesterase TH3_02075 SM00267 diguanylate cyclase TH3_02105 SM01091 Transporter associated domain TH3_02110 SM00116 Domain in cystathionine beta-synthase and other proteins. TH3_02140 SM00271 DnaJ molecular chaperone homology domain TH3_02150 SM00327 von Willebrand factor (vWF) type A domain TH3_02170 SM00052 Putative diguanylate phosphodiesterase TH3_02170 SM00267 diguanylate cyclase TH3_02190 SM00507 HNH nucleases TH3_02200 SM00342 helix_turn_helix, arabinose operon control protein TH3_02235 SM00382 ATPases associated with a variety of cellular activities TH3_02240 SM00382 ATPases associated with a variety of cellular activities TH3_02265 SM00382 ATPases associated with a variety of cellular activities TH3_02265 SM00448 cheY-homologous receiver domain TH3_02270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_02270 SM00387 Histidine kinase-like ATPases TH3_02270 SM00388 His Kinase A (phosphoacceptor) domain TH3_02275 SM00829 Enoylreductase TH3_02295 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_02295 SM00895 TH3_02295 TH3_02320 SM00965 Secretin and TonB N terminus short domain TH3_02345 SM00382 ATPases associated with a variety of cellular activities TH3_02365 SM00354 helix_turn _helix lactose operon repressor TH3_02370 SM00388 His Kinase A (phosphoacceptor) domain TH3_02375 SM00448 cheY-homologous receiver domain TH3_02375 SM00862 Transcriptional regulatory protein, C terminal TH3_02390 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TH3_02400 SM00344 helix_turn_helix ASNC type TH3_02430 SM00346 helix_turn_helix isocitrate lyase regulation TH3_02435 SM00347 helix_turn_helix multiple antibiotic resistance protein TH3_02460 SM00344 helix_turn_helix ASNC type TH3_02490 SM00354 helix_turn _helix lactose operon repressor TH3_02495 SM00382 ATPases associated with a variety of cellular activities TH3_02580 SM00344 helix_turn_helix ASNC type TH3_02620 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_02645 SM00100 Cyclic nucleotide-monophosphate binding domain TH3_02675 SM00829 Enoylreductase TH3_02685 SM00267 diguanylate cyclase TH3_02700 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. TH3_02725 SM00267 diguanylate cyclase TH3_02735 SM00919 Malic enzyme, NAD binding domain TH3_02735 SM01274 TH3_02735 TH3_02740 SM00116 Domain in cystathionine beta-synthase and other proteins. TH3_02740 SM00924 MgtE intracellular N domain TH3_02745 SM00052 Putative diguanylate phosphodiesterase TH3_02745 SM00267 diguanylate cyclase TH3_02745 SM01079 TH3_02745 TH3_02770 SM00831 Cation transporter/ATPase, N-terminus TH3_02805 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TH3_02830 SM00422 helix_turn_helix, mercury resistance TH3_02835 SM00490 helicase superfamily c-terminal domain TH3_02840 SM00363 S4 RNA-binding domain TH3_02845 SM00382 ATPases associated with a variety of cellular activities TH3_02850 SM00382 ATPases associated with a variety of cellular activities TH3_02860 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins TH3_02875 SM01234 TH3_02875 TH3_02895 SM00267 diguanylate cyclase TH3_02900 SM00729 Elongator protein 3, MiaB family, Radical SAM TH3_02905 SM00382 ATPases associated with a variety of cellular activities TH3_02905 SM00962 SRP54-type protein, GTPase domain TH3_02905 SM00963 SRP54-type protein, helical bundle domain TH3_02975 SM00530 Helix-turn-helix XRE-family like proteins TH3_02985 SM00363 S4 RNA-binding domain TH3_03005 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TH3_03015 SM00822 TH3_03015 TH3_03020 SM00342 helix_turn_helix, arabinose operon control protein TH3_03035 SM00382 ATPases associated with a variety of cellular activities TH3_03040 SM01209 TH3_03040 TH3_03040 SM01210 TH3_03040 TH3_03060 SM00347 helix_turn_helix multiple antibiotic resistance protein TH3_03090 SM00382 ATPases associated with a variety of cellular activities TH3_03110 SM00046 Diacylglycerol kinase catalytic domain (presumed) TH3_03175 SM00830 Chorismate mutase type II TH3_03195 SM00382 ATPases associated with a variety of cellular activities TH3_03205 SM00420 helix_turn_helix, Deoxyribose operon repressor TH3_03205 SM01134 TH3_03205 TH3_03245 SM00829 Enoylreductase TH3_03255 SM00382 ATPases associated with a variety of cellular activities TH3_03260 SM00382 ATPases associated with a variety of cellular activities TH3_03290 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TH3_03290 SM01080 TH3_03290 TH3_03350 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TH3_03375 SM01359 TH3_03375 TH3_03375 SM01360 TH3_03375 TH3_03385 SM00344 helix_turn_helix ASNC type TH3_03415 SM00354 helix_turn _helix lactose operon repressor TH3_03475 SM00840 TH3_03475 TH3_03485 SM00422 helix_turn_helix, mercury resistance TH3_03515 SM00917 LeuA allosteric (dimerisation) domain TH3_03530 SM00382 ATPases associated with a variety of cellular activities TH3_03550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_03550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_03555 SM00363 S4 RNA-binding domain TH3_03555 SM01390 TH3_03555 TH3_03600 SM00729 Elongator protein 3, MiaB family, Radical SAM TH3_03620 SM00073 Histidine Phosphotransfer domain TH3_03620 SM00260 Two component signalling adaptor domain TH3_03620 SM00387 Histidine kinase-like ATPases TH3_03620 SM00448 cheY-homologous receiver domain TH3_03620 SM01231 TH3_03620 TH3_03625 SM00260 Two component signalling adaptor domain TH3_03630 SM00448 cheY-homologous receiver domain TH3_03635 SM00448 cheY-homologous receiver domain TH3_03640 SM00138 Methyltransferase, chemotaxis proteins TH3_03645 SM00448 cheY-homologous receiver domain TH3_03645 SM00862 Transcriptional regulatory protein, C terminal TH3_03650 SM00382 ATPases associated with a variety of cellular activities TH3_03680 SM00382 ATPases associated with a variety of cellular activities TH3_03685 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. TH3_03690 SM00344 helix_turn_helix ASNC type TH3_03715 SM00962 SRP54-type protein, GTPase domain TH3_03725 SM00382 ATPases associated with a variety of cellular activities TH3_03850 SM00858 TH3_03850 TH3_03885 SM00448 cheY-homologous receiver domain TH3_03910 SM00671 Sel1-like repeats. TH3_03985 SM00091 PAS domain TH3_03985 SM00387 Histidine kinase-like ATPases TH3_03985 SM00388 His Kinase A (phosphoacceptor) domain TH3_03985 SM00448 cheY-homologous receiver domain TH3_04025 SM00382 ATPases associated with a variety of cellular activities TH3_04030 SM00342 helix_turn_helix, arabinose operon control protein TH3_04065 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TH3_04085 SM00028 Tetratricopeptide repeats TH3_04090 SM00342 helix_turn_helix, arabinose operon control protein TH3_04100 SM00382 ATPases associated with a variety of cellular activities TH3_04115 SM00344 helix_turn_helix ASNC type TH3_04170 SM01329 TH3_04170 TH3_04225 SM00382 ATPases associated with a variety of cellular activities TH3_04230 SM00420 helix_turn_helix, Deoxyribose operon repressor TH3_04230 SM01134 TH3_04230 TH3_04265 SM00257 Lysin motif TH3_04305 SM00342 helix_turn_helix, arabinose operon control protein TH3_04385 SM00984 UDP binding domain TH3_04465 SM00487 DEAD-like helicases superfamily TH3_04465 SM00490 helicase superfamily c-terminal domain TH3_04465 SM00847 Helicase associated domain (HA2) Add an annotation TH3_04515 SM00052 Putative diguanylate phosphodiesterase TH3_04515 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TH3_04515 SM00091 PAS domain TH3_04515 SM00267 diguanylate cyclase TH3_04555 SM00491 TH3_04555 TH3_04565 SM00342 helix_turn_helix, arabinose operon control protein TH3_04600 SM00347 helix_turn_helix multiple antibiotic resistance protein TH3_04615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_04615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_04620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_04620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_04625 SM00052 Putative diguanylate phosphodiesterase TH3_04625 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TH3_04625 SM00091 PAS domain TH3_04625 SM00267 diguanylate cyclase TH3_04625 SM00448 cheY-homologous receiver domain TH3_04630 SM00091 PAS domain TH3_04630 SM00387 Histidine kinase-like ATPases TH3_04655 SM00354 helix_turn _helix lactose operon repressor TH3_04670 SM00382 ATPases associated with a variety of cellular activities TH3_04680 SM00387 Histidine kinase-like ATPases TH3_04680 SM00388 His Kinase A (phosphoacceptor) domain TH3_04680 SM00448 cheY-homologous receiver domain TH3_04680 SM01079 TH3_04680 TH3_04795 SM00671 Sel1-like repeats. TH3_04850 SM00953 TH3_04850 TH3_04865 SM00465 GIY-YIG type nucleases (URI domain) TH3_04985 SM00382 ATPases associated with a variety of cellular activities TH3_05010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_05010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_05015 SM00869 Autotransporter beta-domain TH3_05040 SM00965 Secretin and TonB N terminus short domain TH3_05065 SM00382 ATPases associated with a variety of cellular activities TH3_05100 SM00287 Bacterial SH3 domain homologues TH3_05130 SM00450 Rhodanese Homology Domain TH3_05140 SM00487 DEAD-like helicases superfamily TH3_05140 SM00490 helicase superfamily c-terminal domain TH3_05145 SM00357 Cold shock protein domain TH3_05150 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_05150 SM00895 TH3_05150 TH3_05155 SM00062 Bacterial periplasmic substrate-binding proteins TH3_05170 SM00382 ATPases associated with a variety of cellular activities TH3_05190 SM00342 helix_turn_helix, arabinose operon control protein TH3_05200 SM00829 Enoylreductase TH3_05210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_05210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_05210 SM01049 TH3_05210 TH3_05215 SM00833 Cobalamin synthesis protein cobW C-terminal domain TH3_05305 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TH3_05305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_05345 SM00052 Putative diguanylate phosphodiesterase TH3_05345 SM00267 diguanylate cyclase TH3_05355 SM00331 Sigma factor PP2C-like phosphatases TH3_05355 SM00448 cheY-homologous receiver domain TH3_05365 SM00382 ATPases associated with a variety of cellular activities TH3_05365 SM00448 cheY-homologous receiver domain TH3_05380 SM00387 Histidine kinase-like ATPases TH3_05380 SM00388 His Kinase A (phosphoacceptor) domain TH3_05380 SM00448 cheY-homologous receiver domain TH3_05405 SM00267 diguanylate cyclase TH3_05440 SM00917 LeuA allosteric (dimerisation) domain TH3_05460 SM00267 diguanylate cyclase TH3_05465 SM00357 Cold shock protein domain TH3_05495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_05500 SM00116 Domain in cystathionine beta-synthase and other proteins. TH3_05500 SM01240 TH3_05500 TH3_05535 SM00530 Helix-turn-helix XRE-family like proteins TH3_05555 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TH3_05585 SM00062 Bacterial periplasmic substrate-binding proteins TH3_05600 SM00382 ATPases associated with a variety of cellular activities TH3_05610 SM00346 helix_turn_helix isocitrate lyase regulation TH3_05640 SM00813 Alpha-L-arabinofuranosidase C-terminus TH3_05645 SM00382 ATPases associated with a variety of cellular activities TH3_05665 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TH3_05705 SM00342 helix_turn_helix, arabinose operon control protein TH3_05725 SM00642 Alpha-amylase domain TH3_05730 SM00382 ATPases associated with a variety of cellular activities TH3_05850 SM00763 PrkA AAA domain TH3_05855 SM00450 Rhodanese Homology Domain TH3_05860 SM00530 Helix-turn-helix XRE-family like proteins TH3_05915 SM00967 RNA 2'-O ribose methyltransferase substrate binding TH3_05930 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TH3_05930 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TH3_05935 SM00649 Ribosomal protein L11/L12 TH3_05965 SM00663 RNA polymerase I subunit A N-terminus TH3_05980 SM00838 Elongation factor G C-terminus TH3_05980 SM00889 Elongation factor G, domain IV TH3_05990 SM01403 TH3_05990 TH3_06010 SM01382 TH3_06010 TH3_06010 SM01383 TH3_06010 TH3_06025 SM00322 K homology RNA-binding domain TH3_06045 SM01374 TH3_06045 TH3_06050 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TH3_06115 SM00662 RNA polymerases D TH3_06125 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TH3_06140 SM00382 ATPases associated with a variety of cellular activities TH3_06195 SM00382 ATPases associated with a variety of cellular activities TH3_06220 SM00878 Biotin carboxylase C-terminal domain TH3_06225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_06225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_06280 SM00342 helix_turn_helix, arabinose operon control protein TH3_06285 SM00450 Rhodanese Homology Domain TH3_06345 SM00382 ATPases associated with a variety of cellular activities TH3_06385 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TH3_06400 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TH3_06420 SM00869 Autotransporter beta-domain TH3_06425 SM00342 helix_turn_helix, arabinose operon control protein TH3_06435 SM00382 ATPases associated with a variety of cellular activities TH3_06440 SM00562 TH3_06440 TH3_06500 SM00341 Helicase and RNase D C-terminal TH3_06500 SM00474 3'-5' exonuclease TH3_06555 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TH3_06590 SM00861 Transketolase, pyrimidine binding domain TH3_06640 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_06640 SM00895 TH3_06640 TH3_06645 SM00363 S4 RNA-binding domain TH3_06705 SM01236 TH3_06705 TH3_06720 SM00347 helix_turn_helix multiple antibiotic resistance protein TH3_06735 SM00271 DnaJ molecular chaperone homology domain TH3_06750 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TH3_06845 SM00530 Helix-turn-helix XRE-family like proteins TH3_06880 SM00382 ATPases associated with a variety of cellular activities TH3_06880 SM00448 cheY-homologous receiver domain TH3_06885 SM00387 Histidine kinase-like ATPases TH3_06885 SM00388 His Kinase A (phosphoacceptor) domain TH3_06935 SM00729 Elongator protein 3, MiaB family, Radical SAM TH3_06975 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_06975 SM00895 TH3_06975 TH3_07005 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_07005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_07070 SM00841 Elongation factor P, C-terminal TH3_07070 SM01185 TH3_07070 TH3_07085 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TH3_07090 SM00861 Transketolase, pyrimidine binding domain TH3_07110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_07110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_07115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_07115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_07130 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TH3_07135 SM00382 ATPases associated with a variety of cellular activities TH3_07185 SM00382 ATPases associated with a variety of cellular activities TH3_07200 SM00448 cheY-homologous receiver domain TH3_07200 SM00862 Transcriptional regulatory protein, C terminal TH3_07205 SM00387 Histidine kinase-like ATPases TH3_07205 SM00388 His Kinase A (phosphoacceptor) domain TH3_07210 SM00387 Histidine kinase-like ATPases TH3_07210 SM00388 His Kinase A (phosphoacceptor) domain TH3_07240 SM00028 Tetratricopeptide repeats TH3_07285 SM01002 Alanine dehydrogenase/PNT, C-terminal domain TH3_07285 SM01003 Alanine dehydrogenase/PNT, N-terminal domain TH3_07290 SM00344 helix_turn_helix ASNC type TH3_07325 SM00382 ATPases associated with a variety of cellular activities TH3_07335 SM01230 TH3_07335 TH3_07345 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TH3_07350 SM00267 diguanylate cyclase TH3_07370 SM00679 Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins. TH3_07380 SM00382 ATPases associated with a variety of cellular activities TH3_07395 SM00052 Putative diguanylate phosphodiesterase TH3_07395 SM00448 cheY-homologous receiver domain TH3_07400 SM00886 Stress responsive A/B Barrel Domain TH3_07405 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TH3_07405 SM00091 PAS domain TH3_07405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_07425 SM00953 TH3_07425 TH3_07435 SM00382 ATPases associated with a variety of cellular activities TH3_07445 SM00062 Bacterial periplasmic substrate-binding proteins TH3_07510 SM01266 TH3_07510 TH3_07525 SM00448 cheY-homologous receiver domain TH3_07525 SM00862 Transcriptional regulatory protein, C terminal TH3_07530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_07530 SM00387 Histidine kinase-like ATPases TH3_07530 SM00388 His Kinase A (phosphoacceptor) domain TH3_07550 SM00354 helix_turn _helix lactose operon repressor TH3_07570 SM00382 ATPases associated with a variety of cellular activities TH3_07660 SM00869 Autotransporter beta-domain TH3_07695 SM00867 YceI-like domain TH3_07705 SM00867 YceI-like domain TH3_07710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_07710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_07710 SM01049 TH3_07710 TH3_07715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_07715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_07715 SM01049 TH3_07715 TH3_07730 SM00344 helix_turn_helix ASNC type TH3_07745 SM00487 DEAD-like helicases superfamily TH3_07745 SM00490 helicase superfamily c-terminal domain TH3_07780 SM00387 Histidine kinase-like ATPases TH3_07780 SM00433 TopoisomeraseII TH3_07805 SM00342 helix_turn_helix, arabinose operon control protein TH3_07815 SM00382 ATPases associated with a variety of cellular activities TH3_07820 SM00382 ATPases associated with a variety of cellular activities TH3_07850 SM00448 cheY-homologous receiver domain TH3_07900 SM00881 CoA binding domain TH3_07975 SM00859 Semialdehyde dehydrogenase, NAD binding domain TH3_07995 SM00062 Bacterial periplasmic substrate-binding proteins TH3_08105 SM00849 Metallo-beta-lactamase superfamily TH3_08120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_08120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_08180 SM00382 ATPases associated with a variety of cellular activities TH3_08195 SM00912 haemagglutination activity domain TH3_08240 SM00829 Enoylreductase TH3_08320 SM00833 Cobalamin synthesis protein cobW C-terminal domain TH3_08335 SM00382 ATPases associated with a variety of cellular activities TH3_08375 SM00450 Rhodanese Homology Domain TH3_08380 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TH3_08400 SM00729 Elongator protein 3, MiaB family, Radical SAM TH3_08460 SM00091 PAS domain TH3_08460 SM00267 diguanylate cyclase TH3_08475 SM00271 DnaJ molecular chaperone homology domain TH3_08490 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TH3_08490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_08495 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TH3_08495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_08500 SM00344 helix_turn_helix ASNC type TH3_08510 SM00028 Tetratricopeptide repeats TH3_08545 SM00091 PAS domain TH3_08545 SM00267 diguanylate cyclase TH3_08550 SM00052 Putative diguanylate phosphodiesterase TH3_08555 SM00267 diguanylate cyclase TH3_08575 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_08615 SM00788 Adenylosuccinate synthetase TH3_08620 SM00220 Serine/Threonine protein kinases, catalytic domain TH3_08635 SM00363 S4 RNA-binding domain TH3_08645 SM00232 JAB/MPN domain TH3_08655 SM00347 helix_turn_helix multiple antibiotic resistance protein TH3_08660 SM00382 ATPases associated with a variety of cellular activities TH3_08730 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TH3_08735 SM00382 ATPases associated with a variety of cellular activities TH3_08755 SM00382 ATPases associated with a variety of cellular activities TH3_08760 SM00347 helix_turn_helix multiple antibiotic resistance protein TH3_08790 SM00852 Probable molybdopterin binding domain TH3_08795 SM00849 Metallo-beta-lactamase superfamily TH3_08795 SM01027 Beta-Casp domain TH3_08815 SM00855 Phosphoglycerate mutase family TH3_08835 SM00382 ATPases associated with a variety of cellular activities TH3_08900 SM00100 Cyclic nucleotide-monophosphate binding domain TH3_08900 SM00419 helix_turn_helix, cAMP Regulatory protein TH3_08915 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TH3_08915 SM00245 tail specific protease TH3_08930 SM00316 Ribosomal protein S1-like RNA-binding domain TH3_08930 SM00955 TH3_08930 TH3_08935 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TH3_08935 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TH3_08935 SM00493 TH3_08935 TH3_08945 SM01207 TH3_08945 TH3_08970 SM00732 Likely ribonuclease with RNase H fold. TH3_08985 SM00845 GatB domain TH3_08990 SM00530 Helix-turn-helix XRE-family like proteins TH3_08995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_08995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_08995 SM01358 TH3_08995 TH3_09000 SM00342 helix_turn_helix, arabinose operon control protein TH3_09060 SM00342 helix_turn_helix, arabinose operon control protein TH3_09105 SM01230 TH3_09105 TH3_09145 SM00382 ATPases associated with a variety of cellular activities TH3_09180 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain TH3_09195 SM00420 helix_turn_helix, Deoxyribose operon repressor TH3_09195 SM01134 TH3_09195 TH3_09200 SM00382 ATPases associated with a variety of cellular activities TH3_09215 SM00382 ATPases associated with a variety of cellular activities TH3_09230 SM00062 Bacterial periplasmic substrate-binding proteins TH3_09240 SM00852 Probable molybdopterin binding domain TH3_09260 SM00346 helix_turn_helix isocitrate lyase regulation TH3_09285 SM00028 Tetratricopeptide repeats TH3_09290 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TH3_09340 SM00382 ATPases associated with a variety of cellular activities TH3_09375 SM00710 Parallel beta-helix repeats TH3_09380 SM00422 helix_turn_helix, mercury resistance TH3_09385 SM00881 CoA binding domain TH3_09405 SM00450 Rhodanese Homology Domain TH3_09465 SM00836 DALR anticodon binding domain TH3_09465 SM01016 Arginyl tRNA synthetase N terminal dom TH3_09495 SM00382 ATPases associated with a variety of cellular activities TH3_09530 SM00257 Lysin motif TH3_09540 SM01323 TH3_09540 TH3_09620 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_09620 SM00866 TH3_09620 TH3_09650 SM00382 ATPases associated with a variety of cellular activities TH3_09660 SM00382 ATPases associated with a variety of cellular activities TH3_09690 SM00382 ATPases associated with a variety of cellular activities TH3_09740 SM00487 DEAD-like helicases superfamily TH3_09740 SM00490 helicase superfamily c-terminal domain TH3_09750 SM00487 DEAD-like helicases superfamily TH3_09750 SM00490 helicase superfamily c-terminal domain TH3_09750 SM00982 TH3_09750 TH3_09750 SM01058 CarD-like/TRCF domain TH3_09765 SM01133 TH3_09765 TH3_09785 SM00062 Bacterial periplasmic substrate-binding proteins TH3_09790 SM00382 ATPases associated with a variety of cellular activities TH3_09795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_09795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_09810 SM00936 Penicillin-binding protein 5, C-terminal domain TH3_09835 SM00849 Metallo-beta-lactamase superfamily TH3_09840 SM00347 helix_turn_helix multiple antibiotic resistance protein TH3_09895 SM00382 ATPases associated with a variety of cellular activities TH3_09895 SM00448 cheY-homologous receiver domain TH3_09900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_09900 SM00387 Histidine kinase-like ATPases TH3_09900 SM00388 His Kinase A (phosphoacceptor) domain TH3_09905 SM00382 ATPases associated with a variety of cellular activities TH3_09905 SM00448 cheY-homologous receiver domain TH3_09910 SM00387 Histidine kinase-like ATPases TH3_09910 SM00388 His Kinase A (phosphoacceptor) domain TH3_09950 SM00422 helix_turn_helix, mercury resistance TH3_09955 SM00411 bacterial (prokaryotic) histone like domain TH3_10045 SM00382 ATPases associated with a variety of cellular activities TH3_10050 SM00382 ATPases associated with a variety of cellular activities TH3_10090 SM00420 helix_turn_helix, Deoxyribose operon repressor TH3_10090 SM01134 TH3_10090 TH3_10100 SM01004 Delta-aminolevulinic acid dehydratase TH3_10140 SM00903 Flavin reductase like domain TH3_10175 SM00434 DNA Topoisomerase IV TH3_10195 SM00358 Double-stranded RNA binding motif TH3_10195 SM00535 Ribonuclease III family TH3_10220 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TH3_10220 SM00954 Region found in RelA / SpoT proteins TH3_10225 SM01409 TH3_10225 TH3_10240 SM00986 Uracil DNA glycosylase superfamily TH3_10240 SM00987 UreE urease accessory protein, C-terminal domain TH3_10245 SM00341 Helicase and RNase D C-terminal TH3_10245 SM00487 DEAD-like helicases superfamily TH3_10245 SM00490 helicase superfamily c-terminal domain TH3_10245 SM00956 TH3_10245 TH3_10265 SM01130 TH3_10265 TH3_10305 SM00729 Elongator protein 3, MiaB family, Radical SAM TH3_10320 SM00861 Transketolase, pyrimidine binding domain TH3_10335 SM01192 TH3_10335 TH3_10335 SM01193 TH3_10335 TH3_10465 SM00935 Outer membrane protein (OmpH-like) TH3_10475 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TH3_10520 SM00481 DNA polymerase alpha chain like domain TH3_10525 SM00382 ATPases associated with a variety of cellular activities TH3_10555 SM00849 Metallo-beta-lactamase superfamily TH3_10605 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TH3_10610 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TH3_10650 SM00411 bacterial (prokaryotic) histone like domain TH3_10655 SM00382 ATPases associated with a variety of cellular activities TH3_10655 SM00464 Found in ATP-dependent protease La (LON) TH3_10660 SM00382 ATPases associated with a variety of cellular activities TH3_10660 SM00994 ClpX C4-type zinc finger TH3_10660 SM01086 C-terminal, D2-small domain, of ClpB protein TH3_10685 SM00387 Histidine kinase-like ATPases TH3_10685 SM00388 His Kinase A (phosphoacceptor) domain TH3_10695 SM00422 helix_turn_helix, mercury resistance TH3_10745 SM00382 ATPases associated with a variety of cellular activities TH3_10750 SM00387 Histidine kinase-like ATPases TH3_10750 SM00388 His Kinase A (phosphoacceptor) domain TH3_10755 SM00448 cheY-homologous receiver domain TH3_10755 SM00862 Transcriptional regulatory protein, C terminal TH3_10795 SM00530 Helix-turn-helix XRE-family like proteins TH3_10800 SM01230 TH3_10800 TH3_10860 SM00382 ATPases associated with a variety of cellular activities TH3_10890 SM00382 ATPases associated with a variety of cellular activities TH3_10955 SM01119 TH3_10955 TH3_11020 SM00849 Metallo-beta-lactamase superfamily TH3_11040 SM00998 Adenylosuccinate lyase C-terminus TH3_11050 SM00882 Coenzyme A transferase TH3_11055 SM00882 Coenzyme A transferase TH3_11100 SM00342 helix_turn_helix, arabinose operon control protein TH3_11115 SM00382 ATPases associated with a variety of cellular activities TH3_11150 SM00347 helix_turn_helix multiple antibiotic resistance protein TH3_11235 SM00642 Alpha-amylase domain TH3_11265 SM00346 helix_turn_helix isocitrate lyase regulation TH3_11280 SM00530 Helix-turn-helix XRE-family like proteins TH3_11285 SM00342 helix_turn_helix, arabinose operon control protein TH3_11305 SM00966 SpoVT / AbrB like domain TH3_11340 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_11340 SM00895 TH3_11340 TH3_11360 SM00382 ATPases associated with a variety of cellular activities TH3_11400 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_11400 SM00895 TH3_11400 TH3_11430 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TH3_11450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_11450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_11465 SM00421 helix_turn_helix, Lux Regulon TH3_11465 SM00448 cheY-homologous receiver domain TH3_11480 SM00342 helix_turn_helix, arabinose operon control protein TH3_11500 SM00091 PAS domain TH3_11500 SM00387 Histidine kinase-like ATPases TH3_11500 SM00388 His Kinase A (phosphoacceptor) domain TH3_11500 SM00448 cheY-homologous receiver domain TH3_11525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_11535 SM00342 helix_turn_helix, arabinose operon control protein TH3_11590 SM00434 DNA Topoisomerase IV TH3_11635 SM00938 Nitrogen regulatory protein P-II TH3_11640 SM01230 TH3_11640 TH3_11645 SM00091 PAS domain TH3_11645 SM00267 diguanylate cyclase TH3_11670 SM00342 helix_turn_helix, arabinose operon control protein TH3_11690 SM00342 helix_turn_helix, arabinose operon control protein TH3_11695 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_11695 SM00895 TH3_11695 TH3_11715 SM00052 Putative diguanylate phosphodiesterase TH3_11720 SM00342 helix_turn_helix, arabinose operon control protein TH3_11760 SM00342 helix_turn_helix, arabinose operon control protein TH3_11815 SM00271 DnaJ molecular chaperone homology domain TH3_11895 SM00829 Enoylreductase TH3_11910 SM00342 helix_turn_helix, arabinose operon control protein TH3_11910 SM00478 endonuclease III TH3_11910 SM01009 AlkA N-terminal domain TH3_11925 SM00937 TH3_11925 TH3_11940 SM00646 TH3_11940 TH3_11995 SM00878 Biotin carboxylase C-terminal domain TH3_12025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_12025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_12040 SM00382 ATPases associated with a variety of cellular activities TH3_12040 SM01086 C-terminal, D2-small domain, of ClpB protein TH3_12070 SM00984 UDP binding domain TH3_12080 SM00271 DnaJ molecular chaperone homology domain TH3_12120 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TH3_12135 SM00344 helix_turn_helix ASNC type TH3_12155 SM00878 Biotin carboxylase C-terminal domain TH3_12165 SM01006 Siderophore biosynthesis protein domain TH3_12170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_12170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_12230 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TH3_12230 SM00245 tail specific protease TH3_12265 SM00650 Ribosomal RNA adenine dimethylases TH3_12270 SM00072 Guanylate kinase homologues. TH3_12290 SM00825 Beta-ketoacyl synthase TH3_12300 SM00822 TH3_12300 TH3_12305 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. TH3_12335 SM01005 Alanine racemase, C-terminal domain TH3_12345 SM00382 ATPases associated with a variety of cellular activities TH3_12350 SM00382 ATPases associated with a variety of cellular activities TH3_12395 SM00564 beta-propeller repeat TH3_12415 SM00671 Sel1-like repeats. TH3_12430 SM00564 beta-propeller repeat TH3_12460 SM00883 Chaperonin 10 Kd subunit TH3_12510 SM00382 ATPases associated with a variety of cellular activities TH3_12535 SM00318 Staphylococcal nuclease homologues TH3_12550 SM00855 Phosphoglycerate mutase family TH3_12555 SM00849 Metallo-beta-lactamase superfamily TH3_12560 SM00382 ATPases associated with a variety of cellular activities TH3_12575 SM00420 helix_turn_helix, Deoxyribose operon repressor TH3_12575 SM01134 TH3_12575 TH3_12640 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TH3_12645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_12645 SM00387 Histidine kinase-like ATPases TH3_12645 SM00388 His Kinase A (phosphoacceptor) domain TH3_12650 SM00448 cheY-homologous receiver domain TH3_12650 SM00862 Transcriptional regulatory protein, C terminal TH3_12690 SM00344 helix_turn_helix ASNC type TH3_12695 SM00382 ATPases associated with a variety of cellular activities TH3_12775 SM00344 helix_turn_helix ASNC type TH3_12805 SM00481 DNA polymerase alpha chain like domain TH3_12830 SM00382 ATPases associated with a variety of cellular activities TH3_12845 SM00448 cheY-homologous receiver domain TH3_12845 SM01012 TH3_12845 TH3_12870 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TH3_12930 SM00342 helix_turn_helix, arabinose operon control protein TH3_12970 SM00342 helix_turn_helix, arabinose operon control protein TH3_12975 SM00893 Electron transfer flavoprotein domain TH3_12980 SM00893 Electron transfer flavoprotein domain TH3_13035 SM00965 Secretin and TonB N terminus short domain TH3_13040 SM00382 ATPases associated with a variety of cellular activities TH3_13075 SM01006 Siderophore biosynthesis protein domain TH3_13105 SM00530 Helix-turn-helix XRE-family like proteins TH3_13130 SM00382 ATPases associated with a variety of cellular activities TH3_13225 SM00487 DEAD-like helicases superfamily TH3_13245 SM01040 BRO family, N-terminal domain TH3_13255 SM00487 DEAD-like helicases superfamily TH3_13255 SM00490 helicase superfamily c-terminal domain TH3_13280 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_13280 SM00895 TH3_13280 TH3_13295 SM01130 TH3_13295 TH3_13345 SM00382 ATPases associated with a variety of cellular activities TH3_13350 SM00382 ATPases associated with a variety of cellular activities TH3_13375 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_13375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_13390 SM00244 prohibitin homologues TH3_13425 SM00382 ATPases associated with a variety of cellular activities TH3_13445 SM00062 Bacterial periplasmic substrate-binding proteins TH3_13475 SM00382 ATPases associated with a variety of cellular activities TH3_13490 SM00420 helix_turn_helix, Deoxyribose operon repressor TH3_13490 SM01134 TH3_13490 TH3_13540 SM00382 ATPases associated with a variety of cellular activities TH3_13565 SM00965 Secretin and TonB N terminus short domain TH3_13605 SM01130 TH3_13605 TH3_13620 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_13620 SM00895 TH3_13620 TH3_13630 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_13630 SM00895 TH3_13630 TH3_13680 SM00382 ATPases associated with a variety of cellular activities TH3_13705 SM01130 TH3_13705 TH3_13735 SM00354 helix_turn _helix lactose operon repressor TH3_13750 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TH3_13750 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TH3_13755 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TH3_13775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_13775 SM00387 Histidine kinase-like ATPases TH3_13775 SM00388 His Kinase A (phosphoacceptor) domain TH3_13780 SM00382 ATPases associated with a variety of cellular activities TH3_13780 SM00448 cheY-homologous receiver domain TH3_13795 SM00382 ATPases associated with a variety of cellular activities TH3_13810 SM00823 Phosphopantetheine attachment site TH3_13810 SM00825 Beta-ketoacyl synthase TH3_13810 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. TH3_13815 SM00822 TH3_13815 TH3_13815 SM00823 Phosphopantetheine attachment site TH3_13815 SM00825 Beta-ketoacyl synthase TH3_13815 SM01294 TH3_13815 TH3_13820 SM00823 Phosphopantetheine attachment site TH3_13820 SM00824 Thioesterase TH3_13835 SM00244 prohibitin homologues TH3_13880 SM00382 ATPases associated with a variety of cellular activities TH3_13885 SM00382 ATPases associated with a variety of cellular activities TH3_13890 SM00824 Thioesterase TH3_13910 SM00563 Phosphate acyltransferases TH3_13970 SM00825 Beta-ketoacyl synthase TH3_13980 SM00822 TH3_13980 TH3_13985 SM00825 Beta-ketoacyl synthase TH3_14000 SM00382 ATPases associated with a variety of cellular activities TH3_14005 SM00382 ATPases associated with a variety of cellular activities TH3_14050 SM00347 helix_turn_helix multiple antibiotic resistance protein TH3_14055 SM00822 TH3_14055 TH3_14100 SM00382 ATPases associated with a variety of cellular activities TH3_14135 SM00354 helix_turn _helix lactose operon repressor TH3_14175 SM00530 Helix-turn-helix XRE-family like proteins TH3_14225 SM00382 ATPases associated with a variety of cellular activities TH3_14265 SM00382 ATPases associated with a variety of cellular activities TH3_14285 SM01012 TH3_14285 TH3_14310 SM00382 ATPases associated with a variety of cellular activities TH3_14345 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TH3_14345 SM00091 PAS domain TH3_14345 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_14395 SM00822 TH3_14395 TH3_14410 SM00382 ATPases associated with a variety of cellular activities TH3_14495 SM00062 Bacterial periplasmic substrate-binding proteins TH3_14510 SM00382 ATPases associated with a variety of cellular activities TH3_14520 SM00382 ATPases associated with a variety of cellular activities TH3_14525 SM01219 TH3_14525 TH3_14535 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TH3_14550 SM00829 Enoylreductase TH3_14565 SM00420 helix_turn_helix, Deoxyribose operon repressor TH3_14565 SM01134 TH3_14565 TH3_14585 SM00869 Autotransporter beta-domain TH3_14630 SM00267 diguanylate cyclase TH3_14635 SM01001 AIR carboxylase TH3_14640 SM01209 TH3_14640 TH3_14700 SM01002 Alanine dehydrogenase/PNT, C-terminal domain TH3_14700 SM01003 Alanine dehydrogenase/PNT, N-terminal domain TH3_14735 SM00382 ATPases associated with a variety of cellular activities TH3_14735 SM01086 C-terminal, D2-small domain, of ClpB protein TH3_14760 SM00937 TH3_14760 TH3_14785 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TH3_14820 SM00098 Alkaline phosphatase homologues TH3_14830 SM00382 ATPases associated with a variety of cellular activities TH3_14855 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_14855 SM00895 TH3_14855 TH3_14865 SM00858 TH3_14865 TH3_14935 SM00342 helix_turn_helix, arabinose operon control protein TH3_14940 SM00342 helix_turn_helix, arabinose operon control protein TH3_14945 SM00342 helix_turn_helix, arabinose operon control protein TH3_14965 SM00382 ATPases associated with a variety of cellular activities TH3_14970 SM00382 ATPases associated with a variety of cellular activities TH3_14975 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TH3_15000 SM00342 helix_turn_helix, arabinose operon control protein TH3_15005 SM00822 TH3_15005 TH3_15010 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TH3_15010 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TH3_15015 SM00849 Metallo-beta-lactamase superfamily TH3_15025 SM00998 Adenylosuccinate lyase C-terminus TH3_15050 SM00421 helix_turn_helix, Lux Regulon TH3_15050 SM00448 cheY-homologous receiver domain TH3_15075 SM01211 TH3_15075 TH3_15085 SM00530 Helix-turn-helix XRE-family like proteins TH3_15095 SM00062 Bacterial periplasmic substrate-binding proteins TH3_15105 SM00244 prohibitin homologues TH3_15110 SM00244 prohibitin homologues TH3_15120 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TH3_15175 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_15185 SM00880 TH3_15185 TH3_15185 SM01118 TH3_15185 TH3_15210 SM00316 Ribosomal protein S1-like RNA-binding domain TH3_15220 SM00226 Low molecular weight phosphatase family TH3_15265 SM00421 helix_turn_helix, Lux Regulon TH3_15265 SM00448 cheY-homologous receiver domain TH3_15280 SM00091 PAS domain TH3_15280 SM00387 Histidine kinase-like ATPases TH3_15280 SM00388 His Kinase A (phosphoacceptor) domain TH3_15280 SM00448 cheY-homologous receiver domain TH3_15285 SM00829 Enoylreductase TH3_15430 SM00448 cheY-homologous receiver domain TH3_15455 SM00965 Secretin and TonB N terminus short domain TH3_15515 SM00100 Cyclic nucleotide-monophosphate binding domain TH3_15560 SM00530 Helix-turn-helix XRE-family like proteins TH3_15595 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TH3_15595 SM00267 diguanylate cyclase TH3_15680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_15685 SM01358 TH3_15685 TH3_15690 SM00271 DnaJ molecular chaperone homology domain TH3_15695 SM00382 ATPases associated with a variety of cellular activities TH3_15705 SM00644 TH3_15705 TH3_15725 SM00342 helix_turn_helix, arabinose operon control protein TH3_15845 SM00354 helix_turn _helix lactose operon repressor TH3_15850 SM00382 ATPases associated with a variety of cellular activities TH3_15880 SM00382 ATPases associated with a variety of cellular activities TH3_15885 SM00382 ATPases associated with a variety of cellular activities TH3_15905 SM00346 helix_turn_helix isocitrate lyase regulation TH3_15910 SM00842 Cell division protein FtsA TH3_15915 SM00864 Tubulin/FtsZ family, GTPase domain TH3_15915 SM00865 Tubulin/FtsZ family, C-terminal domain TH3_15935 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TH3_15935 SM00292 breast cancer carboxy-terminal domain TH3_15935 SM00532 Ligase N family TH3_15950 SM00318 Staphylococcal nuclease homologues TH3_15980 SM00822 TH3_15980 TH3_16035 SM01018 B12 binding domain TH3_16050 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TH3_16065 SM00382 ATPases associated with a variety of cellular activities TH3_16080 SM00100 Cyclic nucleotide-monophosphate binding domain TH3_16080 SM00116 Domain in cystathionine beta-synthase and other proteins. TH3_16085 SM00479 TH3_16085 TH3_16105 SM00382 ATPases associated with a variety of cellular activities TH3_16140 SM00100 Cyclic nucleotide-monophosphate binding domain TH3_16140 SM00419 helix_turn_helix, cAMP Regulatory protein TH3_16145 SM00100 Cyclic nucleotide-monophosphate binding domain TH3_16150 SM00100 Cyclic nucleotide-monophosphate binding domain TH3_16150 SM00419 helix_turn_helix, cAMP Regulatory protein TH3_16200 SM00729 Elongator protein 3, MiaB family, Radical SAM TH3_16220 SM00327 von Willebrand factor (vWF) type A domain TH3_16275 SM00382 ATPases associated with a variety of cellular activities TH3_16280 SM00710 Parallel beta-helix repeats TH3_16280 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses TH3_16290 SM00900 TH3_16290 TH3_16295 SM00448 cheY-homologous receiver domain TH3_16295 SM00862 Transcriptional regulatory protein, C terminal TH3_16300 SM00387 Histidine kinase-like ATPases TH3_16300 SM00388 His Kinase A (phosphoacceptor) domain TH3_16325 SM00400 zinc finger TH3_16325 SM00493 TH3_16325 TH3_16335 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain TH3_16340 SM00851 MGS-like domain TH3_16340 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TH3_16355 SM00344 helix_turn_helix ASNC type TH3_16375 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TH3_16380 SM00838 Elongation factor G C-terminus TH3_16380 SM00889 Elongation factor G, domain IV TH3_16435 SM00062 Bacterial periplasmic substrate-binding proteins TH3_16440 SM00487 DEAD-like helicases superfamily TH3_16440 SM00490 helicase superfamily c-terminal domain TH3_16475 SM00829 Enoylreductase TH3_16495 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TH3_16535 SM01400 TH3_16535 TH3_16595 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TH3_16595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_16605 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_16605 SM00895 TH3_16605 TH3_16615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_16615 SM00387 Histidine kinase-like ATPases TH3_16615 SM00388 His Kinase A (phosphoacceptor) domain TH3_16620 SM00448 cheY-homologous receiver domain TH3_16620 SM00862 Transcriptional regulatory protein, C terminal TH3_16625 SM00347 helix_turn_helix multiple antibiotic resistance protein TH3_16685 SM00849 Metallo-beta-lactamase superfamily TH3_16695 SM00419 helix_turn_helix, cAMP Regulatory protein TH3_16710 SM00382 ATPases associated with a variety of cellular activities TH3_16735 SM00822 TH3_16735 TH3_16760 SM00344 helix_turn_helix ASNC type TH3_16790 SM00530 Helix-turn-helix XRE-family like proteins TH3_16800 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase TH3_16820 SM00347 helix_turn_helix multiple antibiotic resistance protein TH3_16820 SM00529 Helix-turn-helix diphteria tox regulatory element TH3_16830 SM00382 ATPases associated with a variety of cellular activities TH3_16875 SM00853 MutL C terminal dimerisation domain TH3_16875 SM01340 TH3_16875 TH3_16905 SM00904 Riboflavin kinase TH3_16975 SM00342 helix_turn_helix, arabinose operon control protein TH3_17055 SM01058 CarD-like/TRCF domain TH3_17065 SM00052 Putative diguanylate phosphodiesterase TH3_17065 SM00091 PAS domain TH3_17065 SM00267 diguanylate cyclase TH3_17070 SM00448 cheY-homologous receiver domain TH3_17080 SM00091 PAS domain TH3_17080 SM00387 Histidine kinase-like ATPases TH3_17080 SM00388 His Kinase A (phosphoacceptor) domain TH3_17085 SM00422 helix_turn_helix, mercury resistance TH3_17165 SM00382 ATPases associated with a variety of cellular activities TH3_17190 SM00382 ATPases associated with a variety of cellular activities TH3_17200 SM00052 Putative diguanylate phosphodiesterase TH3_17200 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TH3_17200 SM00091 PAS domain TH3_17200 SM00116 Domain in cystathionine beta-synthase and other proteins. TH3_17200 SM00267 diguanylate cyclase TH3_17215 SM00382 ATPases associated with a variety of cellular activities TH3_17260 SM00420 helix_turn_helix, Deoxyribose operon repressor TH3_17260 SM01134 TH3_17260 TH3_17265 SM01133 TH3_17265 TH3_17275 SM00382 ATPases associated with a variety of cellular activities TH3_17310 SM00986 Uracil DNA glycosylase superfamily TH3_17310 SM00987 UreE urease accessory protein, C-terminal domain TH3_17355 SM00028 Tetratricopeptide repeats TH3_17400 SM00857 Resolvase, N terminal domain TH3_17460 SM00100 Cyclic nucleotide-monophosphate binding domain TH3_17585 SM00052 Putative diguanylate phosphodiesterase TH3_17585 SM00267 diguanylate cyclase TH3_17595 SM00829 Enoylreductase TH3_17605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_17615 SM00996 S-adenosyl-L-homocysteine hydrolase TH3_17615 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TH3_17625 SM01116 TH3_17625 TH3_17630 SM00382 ATPases associated with a variety of cellular activities TH3_17645 SM00091 PAS domain TH3_17645 SM00382 ATPases associated with a variety of cellular activities TH3_17660 SM00893 Electron transfer flavoprotein domain TH3_17665 SM00893 Electron transfer flavoprotein domain TH3_17710 SM00342 helix_turn_helix, arabinose operon control protein TH3_17730 SM00382 ATPases associated with a variety of cellular activities TH3_17745 SM00563 Phosphate acyltransferases TH3_17775 SM00830 Chorismate mutase type II TH3_17815 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TH3_17815 SM00465 GIY-YIG type nucleases (URI domain) TH3_17820 SM00905 Dihydroneopterin aldolase TH3_17840 SM00448 cheY-homologous receiver domain TH3_17840 SM00862 Transcriptional regulatory protein, C terminal TH3_17850 SM00382 ATPases associated with a variety of cellular activities TH3_17895 SM00878 Biotin carboxylase C-terminal domain TH3_17900 SM00387 Histidine kinase-like ATPases TH3_17900 SM01049 TH3_17900 TH3_17905 SM00421 helix_turn_helix, Lux Regulon TH3_17905 SM00448 cheY-homologous receiver domain TH3_17910 SM00100 Cyclic nucleotide-monophosphate binding domain TH3_17940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_17940 SM00387 Histidine kinase-like ATPases TH3_17940 SM00388 His Kinase A (phosphoacceptor) domain TH3_17940 SM00448 cheY-homologous receiver domain TH3_18005 SM00852 Probable molybdopterin binding domain TH3_18020 SM00957 SecA DEAD-like domain TH3_18020 SM00958 SecA preprotein cross-linking domain TH3_18050 SM00448 cheY-homologous receiver domain TH3_18055 SM00448 cheY-homologous receiver domain TH3_18060 SM00091 PAS domain TH3_18060 SM00387 Histidine kinase-like ATPases TH3_18075 SM00344 helix_turn_helix ASNC type TH3_18085 SM00448 cheY-homologous receiver domain TH3_18105 SM00382 ATPases associated with a variety of cellular activities TH3_18135 SM00382 ATPases associated with a variety of cellular activities TH3_18155 SM00116 Domain in cystathionine beta-synthase and other proteins. TH3_18165 SM00861 Transketolase, pyrimidine binding domain TH3_18175 SM00091 PAS domain TH3_18175 SM00382 ATPases associated with a variety of cellular activities TH3_18190 SM00530 Helix-turn-helix XRE-family like proteins TH3_18205 SM00829 Enoylreductase TH3_18220 SM00382 ATPases associated with a variety of cellular activities TH3_18230 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TH3_18250 SM00988 UreE urease accessory protein, N-terminal domain TH3_18275 SM00382 ATPases associated with a variety of cellular activities TH3_18280 SM00382 ATPases associated with a variety of cellular activities TH3_18305 SM00849 Metallo-beta-lactamase superfamily TH3_18330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_18360 SM00382 ATPases associated with a variety of cellular activities TH3_18375 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TH3_18380 SM01092 CO dehydrogenase flavoprotein C-terminal domain TH3_18470 SM00347 helix_turn_helix multiple antibiotic resistance protein TH3_18510 SM00382 ATPases associated with a variety of cellular activities TH3_18525 SM00947 Carbonic anhydrase TH3_18555 SM00062 Bacterial periplasmic substrate-binding proteins TH3_18560 SM00487 DEAD-like helicases superfamily TH3_18560 SM00490 helicase superfamily c-terminal domain TH3_18565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_18565 SM01049 TH3_18565 TH3_18615 SM00344 helix_turn_helix ASNC type TH3_18645 SM00986 Uracil DNA glycosylase superfamily TH3_18645 SM00987 UreE urease accessory protein, C-terminal domain TH3_18660 SM00347 helix_turn_helix multiple antibiotic resistance protein TH3_18675 SM00382 ATPases associated with a variety of cellular activities TH3_18710 SM00829 Enoylreductase TH3_18760 SM00344 helix_turn_helix ASNC type TH3_18805 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_18805 SM00866 TH3_18805 TH3_18835 SM00897 FIST N domain TH3_18835 SM01204 TH3_18835 TH3_18855 SM00382 ATPases associated with a variety of cellular activities TH3_18935 SM00464 Found in ATP-dependent protease La (LON) TH3_18960 SM00938 Nitrogen regulatory protein P-II TH3_18980 SM00843 TH3_18980 TH3_18985 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_18985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_18985 SM01049 TH3_18985 TH3_18990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_18990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_18990 SM01049 TH3_18990 TH3_19055 SM00838 Elongation factor G C-terminus TH3_19060 SM00091 PAS domain TH3_19060 SM00387 Histidine kinase-like ATPases TH3_19060 SM00388 His Kinase A (phosphoacceptor) domain TH3_19070 SM00873 B3/4 domain TH3_19070 SM00874 tRNA synthetase B5 domain TH3_19070 SM00896 Ferredoxin-fold anticodon binding domain TH3_19090 SM00448 cheY-homologous receiver domain TH3_19160 SM00798 AICARFT/IMPCHase bienzyme TH3_19160 SM00851 MGS-like domain TH3_19190 SM00316 Ribosomal protein S1-like RNA-binding domain TH3_19190 SM00732 Likely ribonuclease with RNase H fold. TH3_19235 SM01150 TH3_19235 TH3_19245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_19290 SM00422 helix_turn_helix, mercury resistance TH3_19340 SM00342 helix_turn_helix, arabinose operon control protein TH3_19375 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_19375 SM00895 TH3_19375 TH3_19400 SM00382 ATPases associated with a variety of cellular activities TH3_19405 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_19405 SM00895 TH3_19405 TH3_19445 SM00448 cheY-homologous receiver domain TH3_19450 SM00448 cheY-homologous receiver domain TH3_19455 SM00387 Histidine kinase-like ATPases TH3_19465 SM00052 Putative diguanylate phosphodiesterase TH3_19465 SM00448 cheY-homologous receiver domain TH3_19470 SM00421 helix_turn_helix, Lux Regulon TH3_19470 SM00448 cheY-homologous receiver domain TH3_19475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_19475 SM00387 Histidine kinase-like ATPases TH3_19475 SM00388 His Kinase A (phosphoacceptor) domain TH3_19480 SM00448 cheY-homologous receiver domain TH3_19480 SM00862 Transcriptional regulatory protein, C terminal TH3_19515 SM00346 helix_turn_helix isocitrate lyase regulation TH3_19535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_19535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_19570 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TH3_19570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_19580 SM00382 ATPases associated with a variety of cellular activities TH3_19615 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TH3_19615 SM00474 3'-5' exonuclease TH3_19615 SM00475 5'-3' exonuclease TH3_19615 SM00482 DNA polymerase A domain TH3_19625 SM00271 DnaJ molecular chaperone homology domain TH3_19640 SM00478 endonuclease III TH3_19640 SM00525 TH3_19640 TH3_19665 SM00342 helix_turn_helix, arabinose operon control protein TH3_19685 SM00838 Elongation factor G C-terminus TH3_19710 SM00382 ATPases associated with a variety of cellular activities TH3_19725 SM00116 Domain in cystathionine beta-synthase and other proteins. TH3_19730 SM00474 3'-5' exonuclease TH3_19745 SM00729 Elongator protein 3, MiaB family, Radical SAM TH3_19775 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TH3_19830 SM00932 Scaffold protein Nfu/NifU N terminal TH3_19835 SM00047 Lysozyme subfamily 2 TH3_19850 SM00919 Malic enzyme, NAD binding domain TH3_19850 SM01274 TH3_19850 TH3_19860 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TH3_19860 SM00534 ATPase domain of DNA mismatch repair MUTS family TH3_19865 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TH3_19890 SM00448 cheY-homologous receiver domain TH3_19890 SM00862 Transcriptional regulatory protein, C terminal TH3_19945 SM00470 ParB-like nuclease domain TH3_19960 SM01228 TH3_19960 TH3_19990 SM00829 Enoylreductase TH3_19995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TH3_20000 SM00357 Cold shock protein domain TH3_20000 SM00382 ATPases associated with a variety of cellular activities TH3_20000 SM00959 Rho termination factor, N-terminal domain TH3_20005 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_20005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_20010 SM00530 Helix-turn-helix XRE-family like proteins TH3_20015 SM00463 Small MutS-related domain TH3_20030 SM00479 TH3_20030 TH3_20080 SM00978 TH3_20080 TH3_20085 SM00925 MltA specific insert domain TH3_20090 SM00886 Stress responsive A/B Barrel Domain TH3_20140 SM00347 helix_turn_helix multiple antibiotic resistance protein TH3_20160 SM00382 ATPases associated with a variety of cellular activities TH3_20185 SM00822 TH3_20185 TH3_20260 SM00382 ATPases associated with a variety of cellular activities TH3_20260 SM01086 C-terminal, D2-small domain, of ClpB protein TH3_20265 SM00387 Histidine kinase-like ATPases TH3_20265 SM00388 His Kinase A (phosphoacceptor) domain TH3_20325 SM00354 helix_turn _helix lactose operon repressor TH3_20350 SM00382 ATPases associated with a variety of cellular activities TH3_20385 SM00563 Phosphate acyltransferases TH3_20390 SM00729 Elongator protein 3, MiaB family, Radical SAM TH3_20405 SM00116 Domain in cystathionine beta-synthase and other proteins. TH3_20405 SM01091 Transporter associated domain TH3_20415 SM00530 Helix-turn-helix XRE-family like proteins TH3_20440 SM00965 Secretin and TonB N terminus short domain TH3_20450 SM00382 ATPases associated with a variety of cellular activities TH3_20470 SM00316 Ribosomal protein S1-like RNA-binding domain TH3_20470 SM00322 K homology RNA-binding domain TH3_20495 SM01387 TH3_20495 TH3_20500 SM00316 Ribosomal protein S1-like RNA-binding domain TH3_20500 SM00322 K homology RNA-binding domain TH3_20525 SM00382 ATPases associated with a variety of cellular activities TH3_20550 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_20550 SM00895 TH3_20550 TH3_20570 SM00729 Elongator protein 3, MiaB family, Radical SAM TH3_20570 SM00876 Biotin and Thiamin Synthesis associated domain TH3_20580 SM00345 helix_turn_helix gluconate operon transcriptional repressor TH3_20580 SM00895 TH3_20580 TH3_20590 SM00460 Transglutaminase/protease-like homologues TH3_20670 SM00855 Phosphoglycerate mutase family TH3_20730 SM00028 Tetratricopeptide repeats TH3_20745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_20745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TH3_20785 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TH3_20785 SM00091 PAS domain TH3_20785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TH3_20790 SM00849 Metallo-beta-lactamase superfamily TH3_20805 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TH3_20825 SM00028 Tetratricopeptide repeats TH3_20845 SM00316 Ribosomal protein S1-like RNA-binding domain TH3_20855 SM00411 bacterial (prokaryotic) histone like domain TH3_20865 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family TH3_20880 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain TH3_20880 SM01232 TH3_20880 TH3_21228 SM00479 TH3_21228 TH3_21263 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TH3_21263 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TH3_21263 SM00493 TH3_21263 TH3_21333 SM00530 Helix-turn-helix XRE-family like proteins TH3_21343 SM00953 TH3_21343 TH3_21388 SM00346 helix_turn_helix isocitrate lyase regulation TH3_21413 SM00859 Semialdehyde dehydrogenase, NAD binding domain TH3_21428 SM00953 TH3_21428 TH3_21438 SM00857 Resolvase, N terminal domain TH3_21558 SM00400 zinc finger TH3_21818 SM00530 Helix-turn-helix XRE-family like proteins TH3_21923 SM00857 Resolvase, N terminal domain