locus-tag class description Tharo_0001 PF00308 Bacterial dnaA protein Tharo_0001 PF08299 Bacterial dnaA protein helix-turn-helix Tharo_0001 PF11638 DnaA N-terminal domain Tharo_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Tharo_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Tharo_0002 PF02767 DNA polymerase III beta subunit, central domain Tharo_0003 PF00204 DNA gyrase B Tharo_0003 PF00986 DNA gyrase B subunit, carboxyl terminus Tharo_0003 PF18053 DNA gyrase B subunit insert domain Tharo_0003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_0003 PF01751 Toprim domain Tharo_0005 PF01555 DNA methylase Tharo_0010 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Tharo_0018 PF00593 TonB dependent receptor Tharo_0018 PF07715 TonB-dependent Receptor Plug Domain Tharo_0019 PF01863 Protein of unknown function DUF45 Tharo_0020 PF00141 Peroxidase Tharo_0021 PF01676 Metalloenzyme superfamily Tharo_0021 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Tharo_0022 PF00970 Oxidoreductase FAD-binding domain Tharo_0022 PF00175 Oxidoreductase NAD-binding domain Tharo_0022 PF00042 Globin Tharo_0023 PF00753 Metallo-beta-lactamase superfamily Tharo_0023 PF16123 Hydroxyacylglutathione hydrolase C-terminus Tharo_0024 PF07690 Major Facilitator Superfamily Tharo_0026 PF10672 S-adenosylmethionine-dependent methyltransferase Tharo_0026 PF17785 PUA-like domain Tharo_0030 PF12794 Mechanosensitive ion channel inner membrane domain 1 Tharo_0030 PF12795 Mechanosensitive ion channel porin domain Tharo_0030 PF00924 Mechanosensitive ion channel Tharo_0032 PF03547 Membrane transport protein Tharo_0034 PF10415 Fumarase C C-terminus Tharo_0034 PF00206 Lyase Tharo_0038 PF16658 Class II release factor RF3, C-terminal domain Tharo_0038 PF00009 Elongation factor Tu GTP binding domain Tharo_0038 PF03144 Elongation factor Tu domain 2 Tharo_0041 PF01145 SPFH domain / Band 7 family Tharo_0043 PF04381 Putative exonuclease, RdgC Tharo_0045 PF01479 S4 domain Tharo_0045 PF00849 RNA pseudouridylate synthase Tharo_0049 PF01132 Elongation factor P (EF-P) OB domain Tharo_0049 PF09285 Elongation factor P, C-terminal Tharo_0049 PF08207 Elongation factor P (EF-P) KOW-like domain Tharo_0052 PF08534 Redoxin Tharo_0053 PF01435 Peptidase family M48 Tharo_0054 PF02911 Formyl transferase, C-terminal domain Tharo_0054 PF00551 Formyl transferase Tharo_0055 PF01327 Polypeptide deformylase Tharo_0057 PF02481 DNA recombination-mediator protein A Tharo_0057 PF17782 DprA winged helix domain Tharo_0058 PF04361 Protein of unknown function (DUF494) Tharo_0059 PF01131 DNA topoisomerase Tharo_0059 PF01751 Toprim domain Tharo_0060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tharo_0060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tharo_0060 PF00205 Thiamine pyrophosphate enzyme, central domain Tharo_0061 PF01037 Lrp/AsnC ligand binding domain Tharo_0062 PF00210 Ferritin-like domain Tharo_0063 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_0063 PF03466 LysR substrate binding domain Tharo_0064 PF13180 PDZ domain Tharo_0065 PF01322 Cytochrome C' Tharo_0067 PF17760 UvrA interaction domain Tharo_0067 PF17755 UvrA DNA-binding domain Tharo_0067 PF00005 ABC transporter Tharo_0069 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Tharo_0069 PF00361 Proton-conducting membrane transporter Tharo_0069 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Tharo_0069 PF13244 Domain of unknown function (DUF4040) Tharo_0070 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Tharo_0071 PF00361 Proton-conducting membrane transporter Tharo_0072 PF01899 Na+/H+ ion antiporter subunit Tharo_0073 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Tharo_0075 PF03741 Integral membrane protein TerC family Tharo_0076 PF01595 Cyclin M transmembrane N-terminal domain Tharo_0076 PF00571 CBS domain Tharo_0076 PF03471 Transporter associated domain Tharo_0078 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH Tharo_0080 PF00664 ABC transporter transmembrane region Tharo_0080 PF00005 ABC transporter Tharo_0081 PF12320 Type 5 capsule protein repressor C-terminal domain Tharo_0081 PF00149 Calcineurin-like phosphoesterase Tharo_0082 PF13175 AAA ATPase domain Tharo_0087 PF01494 FAD binding domain Tharo_0088 PF01070 FMN-dependent dehydrogenase Tharo_0089 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tharo_0089 PF02770 Acyl-CoA dehydrogenase, middle domain Tharo_0089 PF18158 Adaptive response protein AidB N-terminal domain Tharo_0090 PF02770 Acyl-CoA dehydrogenase, middle domain Tharo_0090 PF18158 Adaptive response protein AidB N-terminal domain Tharo_0090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tharo_0092 PF08502 LeuA allosteric (dimerisation) domain Tharo_0092 PF00682 HMGL-like Tharo_0093 PF01037 Lrp/AsnC ligand binding domain Tharo_0094 PF12849 PBP superfamily domain Tharo_0097 PF13247 4Fe-4S dicluster domain Tharo_0098 PF00384 Molybdopterin oxidoreductase Tharo_0098 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tharo_0098 PF01568 Molydopterin dinucleotide binding domain Tharo_0099 PF02634 FdhD/NarQ family Tharo_0100 PF12727 PBP superfamily domain Tharo_0100 PF12728 Helix-turn-helix domain Tharo_0101 PF02770 Acyl-CoA dehydrogenase, middle domain Tharo_0101 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tharo_0101 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tharo_0102 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tharo_0102 PF02770 Acyl-CoA dehydrogenase, middle domain Tharo_0102 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tharo_0105 PF13932 GidA associated domain Tharo_0105 PF01134 Glucose inhibited division protein A Tharo_0106 PF02527 rRNA small subunit methyltransferase G Tharo_0107 PF13614 AAA domain Tharo_0108 PF02195 ParB-like nuclease domain Tharo_0108 PF17762 HTH domain found in ParB protein Tharo_0109 PF07690 Major Facilitator Superfamily Tharo_0111 PF00119 ATP synthase A chain Tharo_0112 PF00137 ATP synthase subunit C Tharo_0113 PF00430 ATP synthase B/B' CF(0) Tharo_0114 PF00213 ATP synthase delta (OSCP) subunit Tharo_0115 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tharo_0115 PF00306 ATP synthase alpha/beta chain, C terminal domain Tharo_0115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tharo_0116 PF00231 ATP synthase Tharo_0117 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tharo_0117 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tharo_0118 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Tharo_0118 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Tharo_0121 PF01209 ubiE/COQ5 methyltransferase family Tharo_0123 PF00486 Transcriptional regulatory protein, C terminal Tharo_0123 PF00072 Response regulator receiver domain Tharo_0124 PF11808 Phosphate regulon sensor protein PhoR Tharo_0124 PF00989 PAS fold Tharo_0124 PF00512 His Kinase A (phospho-acceptor) domain Tharo_0124 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_0126 PF13230 Glutamine amidotransferases class-II Tharo_0127 PF02384 N-6 DNA Methylase Tharo_0129 PF01420 Type I restriction modification DNA specificity domain Tharo_0133 PF02637 GatB domain Tharo_0133 PF02934 GatB/GatE catalytic domain Tharo_0134 PF01425 Amidase Tharo_0135 PF02686 Glu-tRNAGln amidotransferase C subunit Tharo_0138 PF04093 rod shape-determining protein MreD Tharo_0139 PF03717 Penicillin-binding Protein dimerisation domain Tharo_0139 PF00905 Penicillin binding protein transpeptidase domain Tharo_0140 PF01098 Cell cycle protein Tharo_0141 PF03330 Lytic transglycolase Tharo_0141 PF05036 Sporulation related domain Tharo_0142 PF07943 Penicillin-binding protein 5, C-terminal domain Tharo_0142 PF00768 D-alanyl-D-alanine carboxypeptidase Tharo_0143 PF01063 Amino-transferase class IV Tharo_0144 PF04359 Protein of unknown function (DUF493) Tharo_0145 PF03099 Biotin/lipoate A/B protein ligase family Tharo_0146 PF04055 Radical SAM superfamily Tharo_0146 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Tharo_0148 PF13361 UvrD-like helicase C-terminal domain Tharo_0148 PF00580 UvrD/REP helicase N-terminal domain Tharo_0156 PF13333 Integrase core domain Tharo_0156 PF00665 Integrase core domain Tharo_0156 PF13276 HTH-like domain Tharo_0158 PF13276 HTH-like domain Tharo_0158 PF00665 Integrase core domain Tharo_0158 PF13333 Integrase core domain Tharo_0163 PF09339 IclR helix-turn-helix domain Tharo_0163 PF01614 Bacterial transcriptional regulator Tharo_0164 PF09339 IclR helix-turn-helix domain Tharo_0164 PF01614 Bacterial transcriptional regulator Tharo_0165 PF04199 Putative cyclase Tharo_0168 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Tharo_0168 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Tharo_0169 PF05853 beta-keto acid cleavage enzyme Tharo_0173 PF07044 Protein of unknown function (DUF1329) Tharo_0179 PF00384 Molybdopterin oxidoreductase Tharo_0179 PF01568 Molydopterin dinucleotide binding domain Tharo_0181 PF02310 B12 binding domain Tharo_0181 PF02607 B12 binding domain Tharo_0186 PF01979 Amidohydrolase family Tharo_0187 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Tharo_0187 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Tharo_0189 PF03466 LysR substrate binding domain Tharo_0189 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_0190 PF00296 Luciferase-like monooxygenase Tharo_0191 PF01996 F420-0:Gamma-glutamyl ligase Tharo_0191 PF00881 Nitroreductase family Tharo_0194 PF04055 Radical SAM superfamily Tharo_0199 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_0199 PF03466 LysR substrate binding domain Tharo_0200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tharo_0200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tharo_0200 PF00205 Thiamine pyrophosphate enzyme, central domain Tharo_0201 PF13193 AMP-binding enzyme C-terminal domain Tharo_0201 PF00501 AMP-binding enzyme Tharo_0202 PF13808 DDE_Tnp_1-associated Tharo_0202 PF01609 Transposase DDE domain Tharo_0206 PF00665 Integrase core domain Tharo_0206 PF13333 Integrase core domain Tharo_0206 PF13276 HTH-like domain Tharo_0215 PF01845 CcdB protein Tharo_0216 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding Tharo_0216 PF18381 YcaO cyclodehydratase C-terminal domain Tharo_0217 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Tharo_0218 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Tharo_0223 PF13007 Transposase C of IS166 homeodomain Tharo_0223 PF03050 Transposase IS66 family Tharo_0223 PF13005 zinc-finger binding domain of transposase IS66 Tharo_0223 PF13817 IS66 C-terminal element Tharo_0228 PF13276 HTH-like domain Tharo_0228 PF00665 Integrase core domain Tharo_0228 PF13333 Integrase core domain Tharo_0230 PF13276 HTH-like domain Tharo_0230 PF00665 Integrase core domain Tharo_0230 PF13333 Integrase core domain Tharo_0233 PF00271 Helicase conserved C-terminal domain Tharo_0233 PF04851 Type III restriction enzyme, res subunit Tharo_0236 PF02082 Transcriptional regulator Tharo_0237 PF00753 Metallo-beta-lactamase superfamily Tharo_0237 PF00301 Rubredoxin Tharo_0237 PF00258 Flavodoxin Tharo_0238 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_0238 PF03466 LysR substrate binding domain Tharo_0241 PF14497 Glutathione S-transferase, C-terminal domain Tharo_0241 PF02798 Glutathione S-transferase, N-terminal domain Tharo_0242 PF13193 AMP-binding enzyme C-terminal domain Tharo_0242 PF00501 AMP-binding enzyme Tharo_0243 PF00067 Cytochrome P450 Tharo_0244 PF03480 Bacterial extracellular solute-binding protein, family 7 Tharo_0246 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Tharo_0251 PF08495 FIST N domain Tharo_0251 PF10442 FIST C domain Tharo_0252 PF00625 Guanylate kinase Tharo_0253 PF01192 RNA polymerase Rpb6 Tharo_0254 PF13291 ACT domain Tharo_0254 PF02824 TGS domain Tharo_0254 PF04607 Region found in RelA / SpoT proteins Tharo_0256 PF04851 Type III restriction enzyme, res subunit Tharo_0256 PF00929 Exonuclease Tharo_0256 PF13307 Helicase C-terminal domain Tharo_0259 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_0259 PF07730 Histidine kinase Tharo_0259 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Tharo_0259 PF00672 HAMP domain Tharo_0260 PF00196 Bacterial regulatory proteins, luxR family Tharo_0260 PF00072 Response regulator receiver domain Tharo_0261 PF00005 ABC transporter Tharo_0262 PF03379 CcmB protein Tharo_0263 PF01578 Cytochrome C assembly protein Tharo_0265 PF03100 CcmE Tharo_0266 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Tharo_0266 PF01578 Cytochrome C assembly protein Tharo_0267 PF08534 Redoxin Tharo_0268 PF03918 Cytochrome C biogenesis protein Tharo_0270 PF00842 Alanine racemase, C-terminal domain Tharo_0270 PF01168 Alanine racemase, N-terminal domain Tharo_0278 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system Tharo_0285 PF00392 Bacterial regulatory proteins, gntR family Tharo_0285 PF00155 Aminotransferase class I and II Tharo_0286 PF03594 Benzoate membrane transport protein Tharo_0287 PF01168 Alanine racemase, N-terminal domain Tharo_0288 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Tharo_0288 PF00117 Glutamine amidotransferase class-I Tharo_0289 PF00202 Aminotransferase class-III Tharo_0290 PF00464 Serine hydroxymethyltransferase Tharo_0291 PF12680 SnoaL-like domain Tharo_0291 PF08281 Sigma-70, region 4 Tharo_0291 PF04542 Sigma-70 region 2 Tharo_0295 PF07715 TonB-dependent Receptor Plug Domain Tharo_0295 PF00593 TonB dependent receptor Tharo_0297 PF01209 ubiE/COQ5 methyltransferase family Tharo_0299 PF03466 LysR substrate binding domain Tharo_0299 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_0300 PF04002 RadC-like JAB domain Tharo_0315 PF13005 zinc-finger binding domain of transposase IS66 Tharo_0315 PF13007 Transposase C of IS166 homeodomain Tharo_0315 PF03050 Transposase IS66 family Tharo_0315 PF13817 IS66 C-terminal element Tharo_0321 PF13007 Transposase C of IS166 homeodomain Tharo_0321 PF13005 zinc-finger binding domain of transposase IS66 Tharo_0321 PF03050 Transposase IS66 family Tharo_0321 PF13817 IS66 C-terminal element Tharo_0322 PF13356 Arm DNA-binding domain Tharo_0322 PF00589 Phage integrase family Tharo_0322 PF14659 Phage integrase, N-terminal SAM-like domain Tharo_0324 PF05524 PEP-utilising enzyme, N-terminal Tharo_0324 PF00391 PEP-utilising enzyme, mobile domain Tharo_0324 PF02896 PEP-utilising enzyme, TIM barrel domain Tharo_0325 PF00381 PTS HPr component phosphorylation site Tharo_0326 PF03610 PTS system fructose IIA component Tharo_0326 PF03830 PTS system sorbose subfamily IIB component Tharo_0330 PF00460 Flagella basal body rod protein Tharo_0331 PF00460 Flagella basal body rod protein Tharo_0331 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tharo_0332 PF13861 FlgD Tudor-like domain Tharo_0332 PF03963 Flagellar hook capping protein - N-terminal region Tharo_0332 PF13860 FlgD Ig-like domain Tharo_0333 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tharo_0333 PF00460 Flagella basal body rod protein Tharo_0333 PF07559 Flagellar basal body protein FlaE Tharo_0334 PF00460 Flagella basal body rod protein Tharo_0334 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tharo_0335 PF00460 Flagella basal body rod protein Tharo_0335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tharo_0336 PF02107 Flagellar L-ring protein Tharo_0337 PF02119 Flagellar P-ring protein Tharo_0338 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Tharo_0338 PF10135 Rod binding protein Tharo_0339 PF00460 Flagella basal body rod protein Tharo_0339 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tharo_0340 PF00669 Bacterial flagellin N-terminal helical region Tharo_0341 PF01311 Bacterial export proteins, family 1 Tharo_0342 PF01313 Bacterial export proteins, family 3 Tharo_0343 PF00813 FliP family Tharo_0345 PF16973 Flagellar motor switch protein FliN N-terminal Tharo_0345 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Tharo_0346 PF02154 Flagellar motor switch protein FliM Tharo_0346 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Tharo_0347 PF03748 Flagellar basal body-associated protein FliL Tharo_0351 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tharo_0351 PF18269 T3SS EscN ATPase C-terminal domain Tharo_0353 PF14841 FliG middle domain Tharo_0353 PF14842 FliG N-terminal domain Tharo_0353 PF01706 FliG C-terminal domain Tharo_0354 PF08345 Flagellar M-ring protein C-terminal Tharo_0354 PF01514 Secretory protein of YscJ/FliF family Tharo_0356 PF03646 FlaG protein Tharo_0357 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tharo_0357 PF02203 Tar ligand binding domain homologue Tharo_0357 PF00672 HAMP domain Tharo_0359 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Tharo_0360 PF01850 PIN domain Tharo_0361 PF01381 Helix-turn-helix Tharo_0368 PF12445 Flagellin protein Tharo_0368 PF00669 Bacterial flagellin N-terminal helical region Tharo_0368 PF00700 Bacterial flagellin C-terminal helical region Tharo_0369 PF13847 Methyltransferase domain Tharo_0369 PF10119 Predicted methyltransferase regulatory domain Tharo_0372 PF03050 Transposase IS66 family Tharo_0372 PF13817 IS66 C-terminal element Tharo_0372 PF13007 Transposase C of IS166 homeodomain Tharo_0372 PF13005 zinc-finger binding domain of transposase IS66 Tharo_0388 PF07195 Flagellar hook-associated protein 2 C-terminus Tharo_0388 PF02465 Flagellar hook-associated protein 2 N-terminus Tharo_0389 PF02561 Flagellar protein FliS Tharo_0392 PF01312 FlhB HrpN YscU SpaS Family Tharo_0393 PF05247 Flagellar transcriptional activator (FlhD) Tharo_0394 PF05280 Flagellar transcriptional activator (FlhC) Tharo_0395 PF01618 MotA/TolQ/ExbB proton channel family Tharo_0396 PF00691 OmpA family Tharo_0396 PF13677 Membrane MotB of proton-channel complex MotA/MotB Tharo_0397 PF01584 CheW-like domain Tharo_0397 PF09078 CheY binding Tharo_0397 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_0397 PF01627 Hpt domain Tharo_0397 PF02895 Signal transducing histidine kinase, homodimeric domain Tharo_0398 PF01584 CheW-like domain Tharo_0399 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tharo_0399 PF00672 HAMP domain Tharo_0399 PF02203 Tar ligand binding domain homologue Tharo_0400 PF03705 CheR methyltransferase, all-alpha domain Tharo_0400 PF01739 CheR methyltransferase, SAM binding domain Tharo_0401 PF01339 CheB methylesterase Tharo_0401 PF00072 Response regulator receiver domain Tharo_0402 PF00072 Response regulator receiver domain Tharo_0403 PF04344 Chemotaxis phosphatase, CheZ Tharo_0404 PF01312 FlhB HrpN YscU SpaS Family Tharo_0405 PF00771 FHIPEP family Tharo_0406 PF00448 SRP54-type protein, GTPase domain Tharo_0409 PF04545 Sigma-70, region 4 Tharo_0409 PF04542 Sigma-70 region 2 Tharo_0409 PF04539 Sigma-70 region 3 Tharo_0410 PF00005 ABC transporter Tharo_0410 PF12848 ABC transporter Tharo_0411 PF01590 GAF domain Tharo_0411 PF00990 Diguanylate cyclase, GGDEF domain Tharo_0411 PF00360 Phytochrome region Tharo_0411 PF00563 EAL domain Tharo_0412 PF13417 Glutathione S-transferase, N-terminal domain Tharo_0412 PF00043 Glutathione S-transferase, C-terminal domain Tharo_0416 PF00589 Phage integrase family Tharo_0416 PF13356 Arm DNA-binding domain Tharo_0425 PF00565 Staphylococcal nuclease homologue Tharo_0430 PF00589 Phage integrase family Tharo_0434 PF02075 Crossover junction endodeoxyribonuclease RuvC Tharo_0435 PF01906 Putative heavy-metal-binding Tharo_0436 PF00892 EamA-like transporter family Tharo_0437 PF01709 Transcriptional regulator Tharo_0438 PF05872 Bacterial protein of unknown function (DUF853) Tharo_0439 PF02219 Methylenetetrahydrofolate reductase Tharo_0440 PF01728 FtsJ-like methyltransferase Tharo_0440 PF01479 S4 domain Tharo_0441 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Tharo_0441 PF05221 S-adenosyl-L-homocysteine hydrolase Tharo_0442 PF02666 Phosphatidylserine decarboxylase Tharo_0443 PF00672 HAMP domain Tharo_0443 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tharo_0443 PF02203 Tar ligand binding domain homologue Tharo_0445 PF00271 Helicase conserved C-terminal domain Tharo_0445 PF00270 DEAD/DEAH box helicase Tharo_0447 PF01435 Peptidase family M48 Tharo_0449 PF01497 Periplasmic binding protein Tharo_0450 PF00155 Aminotransferase class I and II Tharo_0451 PF17113 Regulatory signalling modulator protein AmpE Tharo_0451 PF03186 CobD/Cbib protein Tharo_0452 PF07685 CobB/CobQ-like glutamine amidotransferase domain Tharo_0452 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tharo_0453 PF14489 QueF-like protein Tharo_0453 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term Tharo_0454 PF00034 Cytochrome c Tharo_0455 PF08668 HDOD domain Tharo_0455 PF00563 EAL domain Tharo_0456 PF00111 2Fe-2S iron-sulfur cluster binding domain Tharo_0456 PF00175 Oxidoreductase NAD-binding domain Tharo_0456 PF00970 Oxidoreductase FAD-binding domain Tharo_0459 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Tharo_0460 PF12804 MobA-like NTP transferase domain Tharo_0461 PF02634 FdhD/NarQ family Tharo_0467 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tharo_0467 PF01568 Molydopterin dinucleotide binding domain Tharo_0467 PF00384 Molybdopterin oxidoreductase Tharo_0468 PF13247 4Fe-4S dicluster domain Tharo_0471 PF01170 Putative RNA methylase family UPF0020 Tharo_0471 PF02926 THUMP domain Tharo_0472 PF00437 Type II/IV secretion system protein Tharo_0473 PF00437 Type II/IV secretion system protein Tharo_0474 PF01168 Alanine racemase, N-terminal domain Tharo_0475 PF14748 Pyrroline-5-carboxylate reductase dimerisation Tharo_0475 PF03807 NADP oxidoreductase coenzyme F420-dependent Tharo_0476 PF02325 YGGT family Tharo_0478 PF01979 Amidohydrolase family Tharo_0479 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Tharo_0479 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Tharo_0480 PF00156 Phosphoribosyl transferase domain Tharo_0481 PF03652 Holliday junction resolvase Tharo_0482 PF02622 Uncharacterized ACR, COG1678 Tharo_0483 PF00875 DNA photolyase Tharo_0483 PF03441 FAD binding domain of DNA photolyase Tharo_0484 PF00155 Aminotransferase class I and II Tharo_0485 PF00301 Rubredoxin Tharo_0487 PF02581 Thiamine monophosphate synthase Tharo_0489 PF00202 Aminotransferase class-III Tharo_0490 PF00571 CBS domain Tharo_0490 PF01769 Divalent cation transporter Tharo_0490 PF03448 MgtE intracellular N domain Tharo_0491 PF00912 Transglycosylase Tharo_0492 PF08501 Shikimate dehydrogenase substrate binding domain Tharo_0492 PF01488 Shikimate / quinate 5-dehydrogenase Tharo_0492 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Tharo_0494 PF00773 RNB domain Tharo_0495 PF05728 Uncharacterised protein family (UPF0227) Tharo_0496 PF02673 Bacitracin resistance protein BacA Tharo_0497 PF10649 Protein of unknown function (DUF2478) Tharo_0497 PF00005 ABC transporter Tharo_0497 PF03459 TOBE domain Tharo_0498 PF04408 Helicase associated domain (HA2) Tharo_0498 PF00271 Helicase conserved C-terminal domain Tharo_0498 PF00270 DEAD/DEAH box helicase Tharo_0498 PF11898 Domain of unknown function (DUF3418) Tharo_0498 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold Tharo_0500 PF01250 Ribosomal protein S6 Tharo_0502 PF01084 Ribosomal protein S18 Tharo_0503 PF01281 Ribosomal protein L9, N-terminal domain Tharo_0503 PF03948 Ribosomal protein L9, C-terminal domain Tharo_0505 PF03796 DnaB-like helicase C terminal domain Tharo_0505 PF00772 DnaB-like helicase N terminal domain Tharo_0511 PF01494 FAD binding domain Tharo_0512 PF10411 Disulfide bond isomerase protein N-terminus Tharo_0512 PF13098 Thioredoxin-like domain Tharo_0513 PF03562 MltA specific insert domain Tharo_0513 PF06725 3D domain Tharo_0515 PF00293 NUDIX domain Tharo_0516 PF03884 DNA gyrase inhibitor YacG Tharo_0517 PF07072 Cell division protein Tharo_0518 PF01121 Dephospho-CoA kinase Tharo_0520 PF00291 Pyridoxal-phosphate dependent enzyme Tharo_0521 PF03309 Type III pantothenate kinase Tharo_0522 PF08279 HTH domain Tharo_0522 PF03099 Biotin/lipoate A/B protein ligase family Tharo_0522 PF02237 Biotin protein ligase C terminal domain Tharo_0523 PF00072 Response regulator receiver domain Tharo_0523 PF00158 Sigma-54 interaction domain Tharo_0523 PF02954 Bacterial regulatory protein, Fis family Tharo_0524 PF00512 His Kinase A (phospho-acceptor) domain Tharo_0524 PF00989 PAS fold Tharo_0524 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_0527 PF16916 Dimerisation domain of Zinc Transporter Tharo_0527 PF01545 Cation efflux family Tharo_0529 PF02445 Quinolinate synthetase A protein Tharo_0530 PF03372 Endonuclease/Exonuclease/phosphatase family Tharo_0531 PF13091 PLD-like domain Tharo_0532 PF13380 CoA binding domain Tharo_0533 PF00749 tRNA synthetases class I (E and Q), catalytic domain Tharo_0534 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Tharo_0535 PF05573 NosL Tharo_0539 PF12679 ABC-2 family transporter protein Tharo_0540 PF00005 ABC transporter Tharo_0541 PF05048 Periplasmic copper-binding protein (NosD) Tharo_0543 PF12801 4Fe-4S binding domain Tharo_0543 PF04205 FMN-binding domain Tharo_0544 PF18793 Nitrous oxide reductase propeller repeat 2 Tharo_0544 PF18764 Nitrous oxide reductase propeller repeat Tharo_0544 PF13473 Cupredoxin-like domain Tharo_0547 PF00072 Response regulator receiver domain Tharo_0548 PF08448 PAS fold Tharo_0548 PF00990 Diguanylate cyclase, GGDEF domain Tharo_0549 PF01926 50S ribosome-binding GTPase Tharo_0549 PF06071 Protein of unknown function (DUF933) Tharo_0550 PF01195 Peptidyl-tRNA hydrolase Tharo_0551 PF14693 Ribosomal protein TL5, C-terminal domain Tharo_0551 PF01386 Ribosomal L25p family Tharo_0552 PF14572 Phosphoribosyl synthetase-associated domain Tharo_0552 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Tharo_0554 PF00288 GHMP kinases N terminal domain Tharo_0554 PF08544 GHMP kinases C terminal Tharo_0555 PF03550 Outer membrane lipoprotein LolB Tharo_0557 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Tharo_0557 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Tharo_0557 PF06827 Zinc finger found in FPG and IleRS Tharo_0558 PF00037 4Fe-4S binding domain Tharo_0559 PF01467 Cytidylyltransferase-like Tharo_0561 PF00675 Insulinase (Peptidase family M16) Tharo_0561 PF05193 Peptidase M16 inactive domain Tharo_0562 PF00675 Insulinase (Peptidase family M16) Tharo_0562 PF05193 Peptidase M16 inactive domain Tharo_0563 PF02881 SRP54-type protein, helical bundle domain Tharo_0563 PF00448 SRP54-type protein, GTPase domain Tharo_0564 PF00005 ABC transporter Tharo_0565 PF18075 FtsX extracellular domain Tharo_0565 PF02687 FtsX-like permease family Tharo_0566 PF10417 C-terminal domain of 1-Cys peroxiredoxin Tharo_0566 PF00578 AhpC/TSA family Tharo_0567 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tharo_0567 PF13192 Thioredoxin domain Tharo_0568 PF00664 ABC transporter transmembrane region Tharo_0568 PF00005 ABC transporter Tharo_0575 PF00589 Phage integrase family Tharo_0575 PF13356 Arm DNA-binding domain Tharo_0590 PF00069 Protein kinase domain Tharo_0592 PF00092 von Willebrand factor type A domain Tharo_0593 PF00158 Sigma-54 interaction domain Tharo_0593 PF02954 Bacterial regulatory protein, Fis family Tharo_0595 PF13276 HTH-like domain Tharo_0595 PF00665 Integrase core domain Tharo_0595 PF13333 Integrase core domain Tharo_0601 PF01938 TRAM domain Tharo_0601 PF00919 Uncharacterized protein family UPF0004 Tharo_0601 PF04055 Radical SAM superfamily Tharo_0602 PF02562 PhoH-like protein Tharo_0603 PF02130 Uncharacterized protein family UPF0054 Tharo_0604 PF03471 Transporter associated domain Tharo_0604 PF00571 CBS domain Tharo_0605 PF00795 Carbon-nitrogen hydrolase Tharo_0606 PF02091 Glycyl-tRNA synthetase alpha subunit Tharo_0607 PF05746 DALR anticodon binding domain Tharo_0607 PF02092 Glycyl-tRNA synthetase beta subunit Tharo_0609 PF01553 Acyltransferase Tharo_0611 PF00378 Enoyl-CoA hydratase/isomerase Tharo_0612 PF03968 OstA-like protein Tharo_0614 PF01380 SIS domain Tharo_0614 PF00571 CBS domain Tharo_0616 PF08334 Type II secretion system (T2SS), protein G Tharo_0616 PF07963 Prokaryotic N-terminal methylation motif Tharo_0621 PF00437 Type II/IV secretion system protein Tharo_0623 PF00005 ABC transporter Tharo_0624 PF02405 Permease MlaE Tharo_0625 PF02470 MlaD protein Tharo_0629 PF00005 ABC transporter Tharo_0630 PF01061 ABC-2 type transporter Tharo_0632 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Tharo_0633 PF14760 Rnk N-terminus Tharo_0633 PF01272 Transcription elongation factor, GreA/GreB, C-term Tharo_0634 PF01634 ATP phosphoribosyltransferase Tharo_0635 PF00815 Histidinol dehydrogenase Tharo_0636 PF00155 Aminotransferase class I and II Tharo_0637 PF00475 Imidazoleglycerol-phosphate dehydratase Tharo_0638 PF00117 Glutamine amidotransferase class-I Tharo_0639 PF00977 Histidine biosynthesis protein Tharo_0640 PF00977 Histidine biosynthesis protein Tharo_0641 PF01502 Phosphoribosyl-AMP cyclohydrolase Tharo_0642 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Tharo_0644 PF02416 mttA/Hcf106 family Tharo_0645 PF02416 mttA/Hcf106 family Tharo_0646 PF00902 Sec-independent protein translocase protein (TatC) Tharo_0647 PF17820 PDZ domain Tharo_0647 PF13180 PDZ domain Tharo_0648 PF01784 NIF3 (NGG1p interacting factor 3) Tharo_0651 PF08442 ATP-grasp domain Tharo_0651 PF00549 CoA-ligase Tharo_0652 PF00549 CoA-ligase Tharo_0652 PF02629 CoA binding domain Tharo_0653 PF00498 FHA domain Tharo_0655 PF00437 Type II/IV secretion system protein Tharo_0655 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Tharo_0657 PF13419 Haloacid dehalogenase-like hydrolase Tharo_0658 PF00425 chorismate binding enzyme Tharo_0658 PF04715 Anthranilate synthase component I, N terminal region Tharo_0659 PF00589 Phage integrase family Tharo_0659 PF13356 Arm DNA-binding domain Tharo_0661 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_0661 PF03466 LysR substrate binding domain Tharo_0662 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Tharo_0662 PF02885 Glycosyl transferase family, helical bundle domain Tharo_0662 PF00591 Glycosyl transferase family, a/b domain Tharo_0663 PF10996 Beta-Casp domain Tharo_0663 PF00753 Metallo-beta-lactamase superfamily Tharo_0663 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Tharo_0667 PF00582 Universal stress protein family Tharo_0668 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus Tharo_0668 PF00561 alpha/beta hydrolase fold Tharo_0669 PF03616 Sodium/glutamate symporter Tharo_0670 PF00871 Acetokinase family Tharo_0672 PF01515 Phosphate acetyl/butaryl transferase Tharo_0673 PF11339 Protein of unknown function (DUF3141) Tharo_0674 PF00106 short chain dehydrogenase Tharo_0677 PF00005 ABC transporter Tharo_0678 PF13533 Biotin-lipoyl like Tharo_0679 PF02321 Outer membrane efflux protein Tharo_0688 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system Tharo_0695 PF04002 RadC-like JAB domain Tharo_0713 PF00580 UvrD/REP helicase N-terminal domain Tharo_0713 PF13361 UvrD-like helicase C-terminal domain Tharo_0713 PF12705 PD-(D/E)XK nuclease superfamily Tharo_0723 PF06067 Domain of unknown function (DUF932) Tharo_0732 PF00145 C-5 cytosine-specific DNA methylase Tharo_0733 PF01131 DNA topoisomerase Tharo_0733 PF01751 Toprim domain Tharo_0734 PF00436 Single-strand binding protein family Tharo_0741 PF13614 AAA domain Tharo_0744 PF00117 Glutamine amidotransferase class-I Tharo_0745 PF00591 Glycosyl transferase family, a/b domain Tharo_0745 PF02885 Glycosyl transferase family, helical bundle domain Tharo_0746 PF00218 Indole-3-glycerol phosphate synthase Tharo_0748 PF01625 Peptide methionine sulfoxide reductase Tharo_0749 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Tharo_0750 PF09382 RQC domain Tharo_0750 PF00271 Helicase conserved C-terminal domain Tharo_0750 PF16124 RecQ zinc-binding Tharo_0750 PF00570 HRDC domain Tharo_0750 PF00270 DEAD/DEAH box helicase Tharo_0752 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Tharo_0752 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Tharo_0753 PF00115 Cytochrome C and Quinol oxidase polypeptide I Tharo_0754 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 Tharo_0756 PF00510 Cytochrome c oxidase subunit III Tharo_0760 PF01040 UbiA prenyltransferase family Tharo_0761 PF02630 SCO1/SenC Tharo_0762 PF04545 Sigma-70, region 4 Tharo_0762 PF04542 Sigma-70 region 2 Tharo_0762 PF00140 Sigma-70 factor, region 1.2 Tharo_0763 PF13609 Gram-negative porin Tharo_0766 PF13609 Gram-negative porin Tharo_0774 PF00591 Glycosyl transferase family, a/b domain Tharo_0774 PF02885 Glycosyl transferase family, helical bundle domain Tharo_0774 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Tharo_0776 PF00211 Adenylate and Guanylate cyclase catalytic domain Tharo_0776 PF16701 Adenylate cyclase regulatory domain Tharo_0778 PF00873 AcrB/AcrD/AcrF family Tharo_0779 PF03707 Bacterial signalling protein N terminal repeat Tharo_0779 PF00990 Diguanylate cyclase, GGDEF domain Tharo_0779 PF00563 EAL domain Tharo_0780 PF01169 Uncharacterized protein family UPF0016 Tharo_0781 PF02661 Fic/DOC family Tharo_0781 PF13784 Fic/DOC family N-terminal Tharo_0782 PF00009 Elongation factor Tu GTP binding domain Tharo_0783 PF01507 Phosphoadenosine phosphosulfate reductase family Tharo_0785 PF01507 Phosphoadenosine phosphosulfate reductase family Tharo_0788 PF01925 Sulfite exporter TauE/SafE Tharo_0789 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_0789 PF03466 LysR substrate binding domain Tharo_0790 PF00710 Asparaginase, N-terminal Tharo_0790 PF17763 Glutaminase/Asparaginase C-terminal domain Tharo_0791 PF00999 Sodium/hydrogen exchanger family Tharo_0791 PF02254 TrkA-N domain Tharo_0792 PF00664 ABC transporter transmembrane region Tharo_0792 PF00005 ABC transporter Tharo_0794 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tharo_0794 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tharo_0794 PF09317 Domain of unknown function (DUF1974) Tharo_0795 PF03061 Thioesterase superfamily Tharo_0796 PF00378 Enoyl-CoA hydratase/isomerase Tharo_0796 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Tharo_0796 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Tharo_0797 PF00108 Thiolase, N-terminal domain Tharo_0797 PF02803 Thiolase, C-terminal domain Tharo_0798 PF11973 NQRA C-terminal domain Tharo_0798 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) Tharo_0799 PF03116 NQR2, RnfD, RnfE family Tharo_0800 PF04205 FMN-binding domain Tharo_0801 PF02508 Rnf-Nqr subunit, membrane protein Tharo_0802 PF02508 Rnf-Nqr subunit, membrane protein Tharo_0803 PF00111 2Fe-2S iron-sulfur cluster binding domain Tharo_0803 PF00175 Oxidoreductase NAD-binding domain Tharo_0803 PF00970 Oxidoreductase FAD-binding domain Tharo_0804 PF00378 Enoyl-CoA hydratase/isomerase Tharo_0805 PF01042 Endoribonuclease L-PSP Tharo_0806 PF00271 Helicase conserved C-terminal domain Tharo_0806 PF00270 DEAD/DEAH box helicase Tharo_0806 PF17191 RecG wedge domain Tharo_0809 PF01040 UbiA prenyltransferase family Tharo_0814 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Tharo_0815 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tharo_0817 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family Tharo_0819 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Tharo_0819 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Tharo_0821 PF01491 Frataxin-like domain Tharo_0822 PF00912 Transglycosylase Tharo_0822 PF17092 Penicillin-binding protein OB-like domain Tharo_0822 PF00905 Penicillin binding protein transpeptidase domain Tharo_0827 PF11741 AMIN domain Tharo_0827 PF00263 Bacterial type II and III secretion system protein Tharo_0827 PF03958 Bacterial type II/III secretion system short domain Tharo_0827 PF07660 Secretin and TonB N terminus short domain Tharo_0828 PF01202 Shikimate kinase Tharo_0829 PF01761 3-dehydroquinate synthase Tharo_0830 PF01966 HD domain Tharo_0830 PF13286 Phosphohydrolase-associated domain Tharo_0831 PF00310 Glutamine amidotransferases class-II Tharo_0831 PF04898 Glutamate synthase central domain Tharo_0831 PF01493 GXGXG motif Tharo_0831 PF01645 Conserved region in glutamate synthase Tharo_0832 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Tharo_0832 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tharo_0833 PF03547 Membrane transport protein Tharo_0834 PF01220 Dehydroquinase class II Tharo_0838 PF00871 Acetokinase family Tharo_0839 PF01515 Phosphate acetyl/butaryl transferase Tharo_0843 PF01575 MaoC like domain Tharo_0844 PF00132 Bacterial transferase hexapeptide (six repeats) Tharo_0844 PF12804 MobA-like NTP transferase domain Tharo_0845 PF01380 SIS domain Tharo_0846 PF00563 EAL domain Tharo_0846 PF00990 Diguanylate cyclase, GGDEF domain Tharo_0846 PF03707 Bacterial signalling protein N terminal repeat Tharo_0847 PF04216 Protein involved in formate dehydrogenase formation Tharo_0848 PF00106 short chain dehydrogenase Tharo_0849 PF00107 Zinc-binding dehydrogenase Tharo_0849 PF08240 Alcohol dehydrogenase GroES-like domain Tharo_0853 PF00535 Glycosyl transferase family 2 Tharo_0856 PF07690 Major Facilitator Superfamily Tharo_0858 PF01568 Molydopterin dinucleotide binding domain Tharo_0858 PF00384 Molybdopterin oxidoreductase Tharo_0859 PF01510 N-acetylmuramoyl-L-alanine amidase Tharo_0861 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain Tharo_0861 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain Tharo_0862 PF00390 Malic enzyme, N-terminal domain Tharo_0862 PF03949 Malic enzyme, NAD binding domain Tharo_0862 PF01515 Phosphate acetyl/butaryl transferase Tharo_0863 PF00768 D-alanyl-D-alanine carboxypeptidase Tharo_0867 PF09339 IclR helix-turn-helix domain Tharo_0867 PF01614 Bacterial transcriptional regulator Tharo_0868 PF00361 Proton-conducting membrane transporter Tharo_0868 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Tharo_0868 PF13244 Domain of unknown function (DUF4040) Tharo_0868 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Tharo_0869 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Tharo_0870 PF00361 Proton-conducting membrane transporter Tharo_0871 PF01899 Na+/H+ ion antiporter subunit Tharo_0872 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Tharo_0875 PF00563 EAL domain Tharo_0875 PF00990 Diguanylate cyclase, GGDEF domain Tharo_0875 PF03707 Bacterial signalling protein N terminal repeat Tharo_0876 PF00849 RNA pseudouridylate synthase Tharo_0876 PF01479 S4 domain Tharo_0878 PF02687 FtsX-like permease family Tharo_0878 PF12704 MacB-like periplasmic core domain Tharo_0878 PF00005 ABC transporter Tharo_0879 PF00005 ABC transporter Tharo_0879 PF12704 MacB-like periplasmic core domain Tharo_0879 PF02687 FtsX-like permease family Tharo_0880 PF12704 MacB-like periplasmic core domain Tharo_0880 PF02687 FtsX-like permease family Tharo_0880 PF00005 ABC transporter Tharo_0881 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Tharo_0881 PF00529 HlyD membrane-fusion protein of T1SS Tharo_0882 PF04471 Restriction endonuclease Tharo_0882 PF14338 Mrr N-terminal domain Tharo_0885 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Tharo_0885 PF00749 tRNA synthetases class I (E and Q), catalytic domain Tharo_0886 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Tharo_0887 PF05736 OprF membrane domain Tharo_0887 PF00691 OmpA family Tharo_0888 PF00176 SNF2 family N-terminal domain Tharo_0888 PF00271 Helicase conserved C-terminal domain Tharo_0888 PF12419 SNF2 Helicase protein Tharo_0890 PF01909 Nucleotidyltransferase domain Tharo_0891 PF01964 Radical SAM ThiC family Tharo_0891 PF13667 ThiC-associated domain Tharo_0892 PF08543 Phosphomethylpyrimidine kinase Tharo_0895 PF02321 Outer membrane efflux protein Tharo_0896 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Tharo_0896 PF00534 Glycosyl transferases group 1 Tharo_0897 PF00149 Calcineurin-like phosphoesterase Tharo_0898 PF01553 Acyltransferase Tharo_0900 PF00294 pfkB family carbohydrate kinase Tharo_0904 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tharo_0904 PF00289 Biotin carboxylase, N-terminal domain Tharo_0904 PF02785 Biotin carboxylase C-terminal domain Tharo_0905 PF00364 Biotin-requiring enzyme Tharo_0906 PF00578 AhpC/TSA family Tharo_0908 PF01225 Mur ligase family, catalytic domain Tharo_0908 PF02875 Mur ligase family, glutamate ligase domain Tharo_0908 PF08245 Mur ligase middle domain Tharo_0910 PF13580 SIS domain Tharo_0911 PF02021 Uncharacterised protein family UPF0102 Tharo_0912 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tharo_0913 PF01979 Amidohydrolase family Tharo_0914 PF02203 Tar ligand binding domain homologue Tharo_0914 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tharo_0914 PF00672 HAMP domain Tharo_0915 PF02381 MraZ protein, putative antitoxin-like Tharo_0916 PF01795 MraW methylase family Tharo_0917 PF04999 Cell division protein FtsL Tharo_0918 PF03717 Penicillin-binding Protein dimerisation domain Tharo_0918 PF00905 Penicillin binding protein transpeptidase domain Tharo_0919 PF08245 Mur ligase middle domain Tharo_0919 PF02875 Mur ligase family, glutamate ligase domain Tharo_0919 PF01225 Mur ligase family, catalytic domain Tharo_0920 PF01225 Mur ligase family, catalytic domain Tharo_0920 PF02875 Mur ligase family, glutamate ligase domain Tharo_0920 PF08245 Mur ligase middle domain Tharo_0921 PF00953 Glycosyl transferase family 4 Tharo_0921 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Tharo_0922 PF08245 Mur ligase middle domain Tharo_0923 PF01098 Cell cycle protein Tharo_0924 PF03033 Glycosyltransferase family 28 N-terminal domain Tharo_0924 PF04101 Glycosyltransferase family 28 C-terminal domain Tharo_0925 PF02875 Mur ligase family, glutamate ligase domain Tharo_0925 PF08245 Mur ligase middle domain Tharo_0925 PF01225 Mur ligase family, catalytic domain Tharo_0926 PF01820 D-ala D-ala ligase N-terminus Tharo_0926 PF07478 D-ala D-ala ligase C-terminus Tharo_0927 PF03799 Cell division protein FtsQ Tharo_0927 PF08478 POTRA domain, FtsQ-type Tharo_0928 PF02491 SHS2 domain inserted in FTSA Tharo_0929 PF00091 Tubulin/FtsZ family, GTPase domain Tharo_0929 PF12327 FtsZ family, C-terminal domain Tharo_0930 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Tharo_0932 PF00535 Glycosyl transferase family 2 Tharo_0934 PF01050 Mannose-6-phosphate isomerase Tharo_0934 PF00483 Nucleotidyl transferase Tharo_0935 PF01061 ABC-2 type transporter Tharo_0936 PF14524 Wzt C-terminal domain Tharo_0936 PF00005 ABC transporter Tharo_0937 PF13439 Glycosyltransferase Family 4 Tharo_0938 PF16363 GDP-mannose 4,6 dehydratase Tharo_0939 PF16363 GDP-mannose 4,6 dehydratase Tharo_0941 PF03062 MBOAT, membrane-bound O-acyltransferase family Tharo_0943 PF00534 Glycosyl transferases group 1 Tharo_0943 PF13439 Glycosyltransferase Family 4 Tharo_0944 PF08241 Methyltransferase domain Tharo_0946 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Tharo_0957 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system Tharo_0959 PF00664 ABC transporter transmembrane region Tharo_0959 PF00005 ABC transporter Tharo_0960 PF00005 ABC transporter Tharo_0960 PF00664 ABC transporter transmembrane region Tharo_0961 PF00529 HlyD membrane-fusion protein of T1SS Tharo_0962 PF02321 Outer membrane efflux protein Tharo_0964 PF07516 SecA Wing and Scaffold domain Tharo_0964 PF01043 SecA preprotein cross-linking domain Tharo_0964 PF07517 SecA DEAD-like domain Tharo_0964 PF02810 SEC-C motif Tharo_0965 PF01960 ArgJ family Tharo_0966 PF08328 Adenylosuccinate lyase C-terminal Tharo_0966 PF00206 Lyase Tharo_0968 PF02355 Protein export membrane protein Tharo_0968 PF07549 SecD/SecF GG Motif Tharo_0969 PF02355 Protein export membrane protein Tharo_0969 PF07549 SecD/SecF GG Motif Tharo_0969 PF13721 SecD export protein N-terminal TM region Tharo_0970 PF02699 Preprotein translocase subunit Tharo_0971 PF01702 Queuine tRNA-ribosyltransferase Tharo_0972 PF02547 Queuosine biosynthesis protein Tharo_0974 PF07804 HipA-like C-terminal domain Tharo_0974 PF13657 HipA N-terminal domain Tharo_0976 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_0976 PF03466 LysR substrate binding domain Tharo_0978 PF01027 Inhibitor of apoptosis-promoting Bax1 Tharo_0979 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Tharo_0980 PF01171 PP-loop family Tharo_0980 PF09179 TilS substrate binding domain Tharo_0980 PF11734 TilS substrate C-terminal domain Tharo_0981 PF00196 Bacterial regulatory proteins, luxR family Tharo_0981 PF00072 Response regulator receiver domain Tharo_0982 PF00989 PAS fold Tharo_0982 PF00512 His Kinase A (phospho-acceptor) domain Tharo_0982 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_0983 PF03480 Bacterial extracellular solute-binding protein, family 7 Tharo_0984 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Tharo_0985 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Tharo_0986 PF09335 SNARE associated Golgi protein Tharo_0987 PF00334 Nucleoside diphosphate kinase Tharo_0988 PF04055 Radical SAM superfamily Tharo_0990 PF13464 Domain of unknown function (DUF4115) Tharo_0991 PF04551 GcpE protein Tharo_0992 PF13393 Histidyl-tRNA synthetase Tharo_0992 PF03129 Anticodon binding domain Tharo_0994 PF13360 PQQ-like domain Tharo_0995 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Tharo_0995 PF01926 50S ribosome-binding GTPase Tharo_0996 PF17209 Hfq protein Tharo_0997 PF13167 GTP-binding GTPase N-terminal Tharo_0997 PF01926 50S ribosome-binding GTPase Tharo_0997 PF16360 GTP-binding GTPase Middle Region Tharo_0998 PF12221 Bacterial membrane protein N terminal Tharo_0998 PF01145 SPFH domain / Band 7 family Tharo_0999 PF01145 SPFH domain / Band 7 family Tharo_1001 PF13393 Histidyl-tRNA synthetase Tharo_1002 PF00709 Adenylosuccinate synthetase Tharo_1005 PF00575 S1 RNA binding domain Tharo_1005 PF00773 RNB domain Tharo_1005 PF17876 Cold shock domain Tharo_1005 PF08206 Ribonuclease B OB domain Tharo_1005 PF08461 Ribonuclease R winged-helix domain Tharo_1006 PF00588 SpoU rRNA Methylase family Tharo_1006 PF08032 RNA 2'-O ribose methyltransferase substrate binding Tharo_1007 PF00881 Nitroreductase family Tharo_1008 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Tharo_1008 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Tharo_1008 PF04324 BFD-like [2Fe-2S] binding domain Tharo_1008 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tharo_1008 PF18267 Rubredoxin NAD+ reductase C-terminal domain Tharo_1009 PF11723 Homotrimeric ring hydroxylase Tharo_1009 PF00355 Rieske [2Fe-2S] domain Tharo_1010 PF07690 Major Facilitator Superfamily Tharo_1011 PF03793 PASTA domain Tharo_1011 PF00069 Protein kinase domain Tharo_1012 PF01568 Molydopterin dinucleotide binding domain Tharo_1012 PF04324 BFD-like [2Fe-2S] binding domain Tharo_1012 PF00384 Molybdopterin oxidoreductase Tharo_1012 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tharo_1013 PF00672 HAMP domain Tharo_1013 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tharo_1014 PF01339 CheB methylesterase Tharo_1014 PF00072 Response regulator receiver domain Tharo_1015 PF01739 CheR methyltransferase, SAM binding domain Tharo_1015 PF03705 CheR methyltransferase, all-alpha domain Tharo_1016 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_1016 PF01584 CheW-like domain Tharo_1016 PF00072 Response regulator receiver domain Tharo_1016 PF01627 Hpt domain Tharo_1017 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_1017 PF00072 Response regulator receiver domain Tharo_1018 PF00072 Response regulator receiver domain Tharo_1018 PF00563 EAL domain Tharo_1018 PF00990 Diguanylate cyclase, GGDEF domain Tharo_1021 PF00990 Diguanylate cyclase, GGDEF domain Tharo_1021 PF00072 Response regulator receiver domain Tharo_1022 PF03600 Citrate transporter Tharo_1022 PF02080 TrkA-C domain Tharo_1023 PF00881 Nitroreductase family Tharo_1024 PF02535 ZIP Zinc transporter Tharo_1026 PF12170 DNA polymerase III tau subunit V interacting with alpha Tharo_1026 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding Tharo_1026 PF12169 DNA polymerase III subunits gamma and tau domain III Tharo_1027 PF02575 YbaB/EbfC DNA-binding family Tharo_1028 PF02132 RecR protein Tharo_1028 PF13662 Toprim domain Tharo_1029 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Tharo_1029 PF00355 Rieske [2Fe-2S] domain Tharo_1030 PF00032 Cytochrome b(C-terminal)/b6/petD Tharo_1030 PF00033 Cytochrome b/b6/petB Tharo_1031 PF02167 Cytochrome C1 family Tharo_1032 PF00043 Glutathione S-transferase, C-terminal domain Tharo_1032 PF02798 Glutathione S-transferase, N-terminal domain Tharo_1033 PF04386 Stringent starvation protein B Tharo_1035 PF01266 FAD dependent oxidoreductase Tharo_1036 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain Tharo_1038 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Tharo_1038 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Tharo_1039 PF00857 Isochorismatase family Tharo_1040 PF00156 Phosphoribosyl transferase domain Tharo_1041 PF00156 Phosphoribosyl transferase domain Tharo_1041 PF01738 Dienelactone hydrolase family Tharo_1042 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Tharo_1044 PF05362 Lon protease (S16) C-terminal proteolytic domain Tharo_1044 PF13654 AAA domain Tharo_1045 PF03746 LamB/YcsF family Tharo_1046 PF02626 Carboxyltransferase domain, subdomain A and B Tharo_1047 PF00166 Chaperonin 10 Kd subunit Tharo_1048 PF00118 TCP-1/cpn60 chaperonin family Tharo_1049 PF00486 Transcriptional regulatory protein, C terminal Tharo_1049 PF00072 Response regulator receiver domain Tharo_1050 PF08521 Two-component sensor kinase N-terminal Tharo_1050 PF00512 His Kinase A (phospho-acceptor) domain Tharo_1050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_1053 PF05016 ParE toxin of type II toxin-antitoxin system, parDE Tharo_1054 PF07690 Major Facilitator Superfamily Tharo_1055 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Tharo_1055 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Tharo_1055 PF01488 Shikimate / quinate 5-dehydrogenase Tharo_1056 PF03462 PCRF domain Tharo_1056 PF00472 RF-1 domain Tharo_1057 PF17827 PrmC N-terminal domain Tharo_1057 PF05175 Methyltransferase small domain Tharo_1058 PF01336 OB-fold nucleic acid binding domain Tharo_1058 PF00152 tRNA synthetases class II (D, K and N) Tharo_1058 PF02938 GAD domain Tharo_1061 PF06750 Bacterial Peptidase A24 N-terminal domain Tharo_1061 PF01478 Type IV leader peptidase family Tharo_1062 PF00482 Type II secretion system (T2SS), protein F Tharo_1063 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Tharo_1063 PF00437 Type II/IV secretion system protein Tharo_1064 PF03471 Transporter associated domain Tharo_1064 PF00571 CBS domain Tharo_1064 PF01595 Cyclin M transmembrane N-terminal domain Tharo_1066 PF02978 Signal peptide binding domain Tharo_1066 PF02881 SRP54-type protein, helical bundle domain Tharo_1066 PF00448 SRP54-type protein, GTPase domain Tharo_1070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Tharo_1071 PF00072 Response regulator receiver domain Tharo_1072 PF03060 Nitronate monooxygenase Tharo_1073 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Tharo_1074 PF00873 AcrB/AcrD/AcrF family Tharo_1079 PF09335 SNARE associated Golgi protein Tharo_1080 PF01119 DNA mismatch repair protein, C-terminal domain Tharo_1080 PF08676 MutL C terminal dimerisation domain Tharo_1081 PF00551 Formyl transferase Tharo_1083 PF01189 16S rRNA methyltransferase RsmB/F Tharo_1083 PF01029 NusB family Tharo_1085 PF01242 6-pyruvoyl tetrahydropterin synthase Tharo_1088 PF00696 Amino acid kinase family Tharo_1088 PF13840 ACT domain Tharo_1088 PF01842 ACT domain Tharo_1090 PF01850 PIN domain Tharo_1091 PF09957 Bacterial antitoxin of type II TA system, VapB Tharo_1097 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_1097 PF03466 LysR substrate binding domain Tharo_1098 PF04303 PrpF protein Tharo_1099 PF04909 Amidohydrolase Tharo_1100 PF03737 Aldolase/RraA Tharo_1101 PF04909 Amidohydrolase Tharo_1102 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit Tharo_1103 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Tharo_1104 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Tharo_1105 PF00248 Aldo/keto reductase family Tharo_1106 PF03480 Bacterial extracellular solute-binding protein, family 7 Tharo_1109 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Tharo_1112 PF13417 Glutathione S-transferase, N-terminal domain Tharo_1113 PF01494 FAD binding domain Tharo_1114 PF01557 Fumarylacetoacetate (FAA) hydrolase family Tharo_1115 PF07883 Cupin domain Tharo_1116 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_1116 PF03466 LysR substrate binding domain Tharo_1117 PF17932 Tetracyclin repressor-like, C-terminal domain Tharo_1117 PF00440 Bacterial regulatory proteins, tetR family Tharo_1119 PF13193 AMP-binding enzyme C-terminal domain Tharo_1119 PF00501 AMP-binding enzyme Tharo_1120 PF00378 Enoyl-CoA hydratase/isomerase Tharo_1121 PF00108 Thiolase, N-terminal domain Tharo_1121 PF02803 Thiolase, C-terminal domain Tharo_1122 PF00106 short chain dehydrogenase Tharo_1123 PF02770 Acyl-CoA dehydrogenase, middle domain Tharo_1123 PF12806 Acetyl-CoA dehydrogenase C-terminal like Tharo_1123 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tharo_1123 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tharo_1124 PF13537 Glutamine amidotransferase domain Tharo_1124 PF00733 Asparagine synthase Tharo_1125 PF02875 Mur ligase family, glutamate ligase domain Tharo_1125 PF08245 Mur ligase middle domain Tharo_1125 PF08443 RimK-like ATP-grasp domain Tharo_1126 PF05343 M42 glutamyl aminopeptidase Tharo_1131 PF01202 Shikimate kinase Tharo_1132 PF00501 AMP-binding enzyme Tharo_1132 PF13193 AMP-binding enzyme C-terminal domain Tharo_1138 PF13193 AMP-binding enzyme C-terminal domain Tharo_1138 PF00501 AMP-binding enzyme Tharo_1140 PF02653 Branched-chain amino acid transport system / permease component Tharo_1141 PF02653 Branched-chain amino acid transport system / permease component Tharo_1141 PF11862 Domain of unknown function (DUF3382) Tharo_1142 PF00005 ABC transporter Tharo_1142 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tharo_1143 PF00005 ABC transporter Tharo_1145 PF00301 Rubredoxin Tharo_1146 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain Tharo_1146 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Tharo_1146 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Tharo_1147 PF10531 SLBB domain Tharo_1147 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tharo_1147 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tharo_1148 PF00384 Molybdopterin oxidoreductase Tharo_1148 PF12838 4Fe-4S dicluster domain Tharo_1148 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tharo_1148 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tharo_1148 PF01568 Molydopterin dinucleotide binding domain Tharo_1149 PF01274 Malate synthase Tharo_1150 PF05977 Transmembrane secretion effector Tharo_1151 PF13525 Outer membrane lipoprotein Tharo_1152 PF00849 RNA pseudouridylate synthase Tharo_1155 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus Tharo_1156 PF00106 short chain dehydrogenase Tharo_1157 PF00106 short chain dehydrogenase Tharo_1158 PF05233 PHB accumulation regulatory domain Tharo_1158 PF07879 PHB/PHA accumulation regulator DNA-binding domain Tharo_1159 PF04055 Radical SAM superfamily Tharo_1159 PF18693 TRAM domain Tharo_1159 PF00919 Uncharacterized protein family UPF0004 Tharo_1160 PF01734 Patatin-like phospholipase Tharo_1161 PF01565 FAD binding domain Tharo_1161 PF02913 FAD linked oxidases, C-terminal domain Tharo_1169 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Tharo_1169 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Tharo_1170 PF07497 Rho termination factor, RNA-binding domain Tharo_1170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tharo_1170 PF07498 Rho termination factor, N-terminal domain Tharo_1171 PF00085 Thioredoxin Tharo_1172 PF00037 4Fe-4S binding domain Tharo_1172 PF11953 Domain of unknown function (DUF3470) Tharo_1174 PF13193 AMP-binding enzyme C-terminal domain Tharo_1174 PF00501 AMP-binding enzyme Tharo_1175 PF00205 Thiamine pyrophosphate enzyme, central domain Tharo_1175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tharo_1175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tharo_1176 PF01842 ACT domain Tharo_1177 PF01264 Chorismate synthase Tharo_1178 PF12832 MFS_1 like family Tharo_1179 PF01435 Peptidase family M48 Tharo_1180 PF00330 Aconitase family (aconitate hydratase) Tharo_1182 PF00694 Aconitase C-terminal domain Tharo_1183 PF00180 Isocitrate/isopropylmalate dehydrogenase Tharo_1184 PF02774 Semialdehyde dehydrogenase, dimerisation domain Tharo_1184 PF01118 Semialdehyde dehydrogenase, NAD binding domain Tharo_1187 PF01416 tRNA pseudouridine synthase Tharo_1188 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Tharo_1189 PF00291 Pyridoxal-phosphate dependent enzyme Tharo_1190 PF00290 Tryptophan synthase alpha chain Tharo_1191 PF17848 Acetyl-coA carboxylase zinc finger domain Tharo_1191 PF01039 Carboxyl transferase domain Tharo_1192 PF02875 Mur ligase family, glutamate ligase domain Tharo_1192 PF08245 Mur ligase middle domain Tharo_1195 PF00156 Phosphoribosyl transferase domain Tharo_1196 PF01053 Cys/Met metabolism PLP-dependent enzyme Tharo_1197 PF00149 Calcineurin-like phosphoesterase Tharo_1198 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Tharo_1199 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Tharo_1200 PF01406 tRNA synthetases class I (C) catalytic domain Tharo_1200 PF09190 DALR domain Tharo_1202 PF01556 DnaJ C terminal domain Tharo_1202 PF00226 DnaJ domain Tharo_1202 PF00684 DnaJ central domain Tharo_1203 PF00012 Hsp70 protein Tharo_1204 PF01025 GrpE Tharo_1205 PF00521 DNA gyrase/topoisomerase IV, subunit A Tharo_1205 PF03989 DNA gyrase C-terminal domain, beta-propeller Tharo_1206 PF00266 Aminotransferase class-V Tharo_1207 PF00800 Prephenate dehydratase Tharo_1207 PF01817 Chorismate mutase type II Tharo_1207 PF01842 ACT domain Tharo_1209 PF01842 ACT domain Tharo_1209 PF02153 Prephenate dehydrogenase Tharo_1210 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Tharo_1211 PF00575 S1 RNA binding domain Tharo_1212 PF00216 Bacterial DNA-binding protein Tharo_1214 PF18073 Rubredoxin metal binding domain Tharo_1215 PF00291 Pyridoxal-phosphate dependent enzyme Tharo_1220 PF04226 Transglycosylase associated protein Tharo_1222 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Tharo_1222 PF02824 TGS domain Tharo_1222 PF03129 Anticodon binding domain Tharo_1222 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tharo_1223 PF00707 Translation initiation factor IF-3, C-terminal domain Tharo_1223 PF05198 Translation initiation factor IF-3, N-terminal domain Tharo_1224 PF01632 Ribosomal protein L35 Tharo_1225 PF00453 Ribosomal protein L20 Tharo_1226 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Tharo_1226 PF01409 tRNA synthetases class II core domain (F) Tharo_1227 PF01588 Putative tRNA binding domain Tharo_1227 PF03147 Ferredoxin-fold anticodon binding domain Tharo_1227 PF03484 tRNA synthetase B5 domain Tharo_1227 PF03483 B3/4 domain Tharo_1227 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Tharo_1228 PF00216 Bacterial DNA-binding protein Tharo_1231 PF01975 Survival protein SurE Tharo_1233 PF01551 Peptidase family M23 Tharo_1233 PF01476 LysM domain Tharo_1234 PF04539 Sigma-70 region 3 Tharo_1234 PF04542 Sigma-70 region 2 Tharo_1234 PF04545 Sigma-70, region 4 Tharo_1234 PF00140 Sigma-70 factor, region 1.2 Tharo_1236 PF13406 Transglycosylase SLT domain Tharo_1237 PF00850 Histone deacetylase domain Tharo_1238 PF00701 Dihydrodipicolinate synthetase family Tharo_1239 PF06804 NlpB/DapX lipoprotein Tharo_1241 PF05958 tRNA (Uracil-5-)-methyltransferase Tharo_1245 PF03466 LysR substrate binding domain Tharo_1245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_1246 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Tharo_1248 PF03480 Bacterial extracellular solute-binding protein, family 7 Tharo_1250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_1250 PF03466 LysR substrate binding domain Tharo_1251 PF01910 Thiamine-binding protein Tharo_1252 PF13193 AMP-binding enzyme C-terminal domain Tharo_1252 PF00501 AMP-binding enzyme Tharo_1253 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_1253 PF03466 LysR substrate binding domain Tharo_1254 PF00132 Bacterial transferase hexapeptide (six repeats) Tharo_1255 PF00171 Aldehyde dehydrogenase family Tharo_1256 PF00378 Enoyl-CoA hydratase/isomerase Tharo_1259 PF05138 Phenylacetic acid catabolic protein Tharo_1260 PF06243 Phenylacetic acid degradation B Tharo_1261 PF05138 Phenylacetic acid catabolic protein Tharo_1262 PF01883 Iron-sulfur cluster assembly protein Tharo_1263 PF00111 2Fe-2S iron-sulfur cluster binding domain Tharo_1263 PF00970 Oxidoreductase FAD-binding domain Tharo_1263 PF00175 Oxidoreductase NAD-binding domain Tharo_1264 PF08359 YsiA-like protein, C-terminal region Tharo_1264 PF00440 Bacterial regulatory proteins, tetR family Tharo_1265 PF02803 Thiolase, C-terminal domain Tharo_1265 PF00108 Thiolase, N-terminal domain Tharo_1266 PF13411 MerR HTH family regulatory protein Tharo_1267 PF03658 RnfH family Ubiquitin Tharo_1268 PF02508 Rnf-Nqr subunit, membrane protein Tharo_1269 PF04205 FMN-binding domain Tharo_1270 PF03116 NQR2, RnfD, RnfE family Tharo_1271 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tharo_1271 PF13237 4Fe-4S dicluster domain Tharo_1271 PF13375 RnfC Barrel sandwich hybrid domain Tharo_1271 PF10531 SLBB domain Tharo_1272 PF04060 Putative Fe-S cluster Tharo_1273 PF02508 Rnf-Nqr subunit, membrane protein Tharo_1274 PF01106 NifU-like domain Tharo_1278 PF00171 Aldehyde dehydrogenase family Tharo_1279 PF00672 HAMP domain Tharo_1279 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_1279 PF17149 Periplasmic sensor domain found in signal transduction proteins Tharo_1279 PF00072 Response regulator receiver domain Tharo_1279 PF01627 Hpt domain Tharo_1279 PF00512 His Kinase A (phospho-acceptor) domain Tharo_1280 PF00486 Transcriptional regulatory protein, C terminal Tharo_1280 PF00072 Response regulator receiver domain Tharo_1283 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit Tharo_1286 PF12802 MarR family Tharo_1296 PF13247 4Fe-4S dicluster domain Tharo_1296 PF12800 4Fe-4S binding domain Tharo_1297 PF01568 Molydopterin dinucleotide binding domain Tharo_1297 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tharo_1297 PF00384 Molybdopterin oxidoreductase Tharo_1298 PF00571 CBS domain Tharo_1300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tharo_1301 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Tharo_1301 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Tharo_1301 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Tharo_1302 PF08240 Alcohol dehydrogenase GroES-like domain Tharo_1302 PF00107 Zinc-binding dehydrogenase Tharo_1303 PF00378 Enoyl-CoA hydratase/isomerase Tharo_1304 PF00378 Enoyl-CoA hydratase/isomerase Tharo_1305 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Tharo_1306 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Tharo_1307 PF01869 BadF/BadG/BcrA/BcrD ATPase family Tharo_1308 PF01869 BadF/BadG/BcrA/BcrD ATPase family Tharo_1309 PF00037 4Fe-4S binding domain Tharo_1315 PF00005 ABC transporter Tharo_1315 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tharo_1316 PF00005 ABC transporter Tharo_1318 PF00521 DNA gyrase/topoisomerase IV, subunit A Tharo_1321 PF00204 DNA gyrase B Tharo_1321 PF00986 DNA gyrase B subunit, carboxyl terminus Tharo_1321 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_1321 PF01751 Toprim domain Tharo_1325 PF05088 Bacterial NAD-glutamate dehydrogenase Tharo_1326 PF00117 Glutamine amidotransferase class-I Tharo_1326 PF06418 CTP synthase N-terminus Tharo_1327 PF00793 DAHP synthetase I family Tharo_1328 PF00113 Enolase, C-terminal TIM barrel domain Tharo_1328 PF03952 Enolase, N-terminal domain Tharo_1329 PF04977 Septum formation initiator Tharo_1330 PF00877 NlpC/P60 family Tharo_1332 PF00132 Bacterial transferase hexapeptide (six repeats) Tharo_1333 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ Tharo_1334 PF01384 Phosphate transporter family Tharo_1336 PF01227 GTP cyclohydrolase I Tharo_1338 PF07152 YaeQ protein Tharo_1339 PF00563 EAL domain Tharo_1339 PF03707 Bacterial signalling protein N terminal repeat Tharo_1339 PF00990 Diguanylate cyclase, GGDEF domain Tharo_1340 PF00271 Helicase conserved C-terminal domain Tharo_1340 PF00270 DEAD/DEAH box helicase Tharo_1340 PF03880 DbpA RNA binding domain Tharo_1341 PF00313 'Cold-shock' DNA-binding domain Tharo_1342 PF01926 50S ribosome-binding GTPase Tharo_1343 PF02811 PHP domain Tharo_1344 PF01300 Telomere recombination Tharo_1345 PF02163 Peptidase family M50 Tharo_1346 PF00579 tRNA synthetases class I (W and Y) Tharo_1347 PF02616 Segregation and condensation protein ScpA Tharo_1348 PF04079 Segregation and condensation complex subunit ScpB Tharo_1349 PF00849 RNA pseudouridylate synthase Tharo_1349 PF01479 S4 domain Tharo_1350 PF02576 RimP N-terminal domain Tharo_1350 PF17384 RimP C-terminal SH3 domain Tharo_1351 PF13184 NusA-like KH domain Tharo_1351 PF08529 NusA N-terminal domain Tharo_1352 PF08364 Bacterial translation initiation factor IF-2 associated region Tharo_1352 PF04760 Translation initiation factor IF-2, N-terminal region Tharo_1352 PF00009 Elongation factor Tu GTP binding domain Tharo_1352 PF11987 Translation-initiation factor 2 Tharo_1353 PF02033 Ribosome-binding factor A Tharo_1354 PF09157 Pseudouridine synthase II TruB, C-terminal Tharo_1354 PF16198 tRNA pseudouridylate synthase B C-terminal domain Tharo_1354 PF01509 TruB family pseudouridylate synthase (N terminal domain) Tharo_1355 PF00312 Ribosomal protein S15 Tharo_1356 PF00013 KH domain Tharo_1356 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Tharo_1356 PF01138 3' exoribonuclease family, domain 1 Tharo_1356 PF00575 S1 RNA binding domain Tharo_1356 PF03725 3' exoribonuclease family, domain 2 Tharo_1357 PF01258 Prokaryotic dksA/traR C4-type zinc finger Tharo_1369 PF01883 Iron-sulfur cluster assembly protein Tharo_1370 PF01592 NifU-like N terminal domain Tharo_1371 PF00266 Aminotransferase class-V Tharo_1372 PF01458 Uncharacterized protein family (UPF0051) Tharo_1373 PF00005 ABC transporter Tharo_1374 PF01458 Uncharacterized protein family (UPF0051) Tharo_1375 PF02082 Transcriptional regulator Tharo_1379 PF01590 GAF domain Tharo_1379 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_1379 PF08446 PAS fold Tharo_1379 PF00360 Phytochrome region Tharo_1380 PF02798 Glutathione S-transferase, N-terminal domain Tharo_1380 PF00043 Glutathione S-transferase, C-terminal domain Tharo_1381 PF01850 PIN domain Tharo_1384 PF01053 Cys/Met metabolism PLP-dependent enzyme Tharo_1386 PF04241 Protein of unknown function (DUF423) Tharo_1387 PF10672 S-adenosylmethionine-dependent methyltransferase Tharo_1387 PF17785 PUA-like domain Tharo_1388 PF00072 Response regulator receiver domain Tharo_1388 PF00486 Transcriptional regulatory protein, C terminal Tharo_1390 PF03707 Bacterial signalling protein N terminal repeat Tharo_1390 PF00990 Diguanylate cyclase, GGDEF domain Tharo_1390 PF00563 EAL domain Tharo_1391 PF00672 HAMP domain Tharo_1391 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_1391 PF00512 His Kinase A (phospho-acceptor) domain Tharo_1391 PF01627 Hpt domain Tharo_1391 PF17149 Periplasmic sensor domain found in signal transduction proteins Tharo_1391 PF00072 Response regulator receiver domain Tharo_1392 PF02705 K+ potassium transporter Tharo_1393 PF00749 tRNA synthetases class I (E and Q), catalytic domain Tharo_1395 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Tharo_1395 PF01266 FAD dependent oxidoreductase Tharo_1396 PF05661 Protein of unknown function (DUF808) Tharo_1397 PF00152 tRNA synthetases class II (D, K and N) Tharo_1397 PF01336 OB-fold nucleic acid binding domain Tharo_1398 PF06470 SMC proteins Flexible Hinge Domain Tharo_1398 PF02463 RecF/RecN/SMC N terminal domain Tharo_1399 PF05958 tRNA (Uracil-5-)-methyltransferase Tharo_1402 PF00472 RF-1 domain Tharo_1402 PF03462 PCRF domain Tharo_1405 PF00392 Bacterial regulatory proteins, gntR family Tharo_1405 PF07702 UTRA domain Tharo_1406 PF00221 Aromatic amino acid lyase Tharo_1407 PF17391 Urocanase N-terminal domain Tharo_1407 PF17392 Urocanase C-terminal domain Tharo_1407 PF01175 Urocanase Rossmann-like domain Tharo_1409 PF00491 Arginase family Tharo_1410 PF01979 Amidohydrolase family Tharo_1411 PF02817 e3 binding domain Tharo_1411 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Tharo_1411 PF00364 Biotin-requiring enzyme Tharo_1412 PF02779 Transketolase, pyrimidine binding domain Tharo_1412 PF02780 Transketolase, C-terminal domain Tharo_1413 PF00676 Dehydrogenase E1 component Tharo_1414 PF03922 OmpW family Tharo_1415 PF02272 DHHA1 domain Tharo_1415 PF17768 RecJ OB domain Tharo_1415 PF01368 DHH family Tharo_1419 PF00155 Aminotransferase class I and II Tharo_1419 PF00392 Bacterial regulatory proteins, gntR family Tharo_1422 PF12801 4Fe-4S binding domain Tharo_1422 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Tharo_1422 PF13746 4Fe-4S dicluster domain Tharo_1423 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Tharo_1423 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Tharo_1426 PF00266 Aminotransferase class-V Tharo_1427 PF00155 Aminotransferase class I and II Tharo_1428 PF00202 Aminotransferase class-III Tharo_1431 PF07690 Major Facilitator Superfamily Tharo_1432 PF07690 Major Facilitator Superfamily Tharo_1433 PF14710 Respiratory nitrate reductase alpha N-terminal Tharo_1433 PF01568 Molydopterin dinucleotide binding domain Tharo_1433 PF00384 Molybdopterin oxidoreductase Tharo_1434 PF14711 Respiratory nitrate reductase beta C-terminal Tharo_1434 PF13247 4Fe-4S dicluster domain Tharo_1435 PF02613 Nitrate reductase delta subunit Tharo_1436 PF02665 Nitrate reductase gamma subunit Tharo_1437 PF00639 PPIC-type PPIASE domain Tharo_1437 PF09312 SurA N-terminal domain Tharo_1439 PF00155 Aminotransferase class I and II Tharo_1439 PF00392 Bacterial regulatory proteins, gntR family Tharo_1442 PF12679 ABC-2 family transporter protein Tharo_1443 PF00005 ABC transporter Tharo_1444 PF05048 Periplasmic copper-binding protein (NosD) Tharo_1446 PF04205 FMN-binding domain Tharo_1446 PF12801 4Fe-4S binding domain Tharo_1447 PF13473 Cupredoxin-like domain Tharo_1447 PF18764 Nitrous oxide reductase propeller repeat Tharo_1447 PF18793 Nitrous oxide reductase propeller repeat 2 Tharo_1448 PF08497 Radical SAM N-terminal Tharo_1448 PF04055 Radical SAM superfamily Tharo_1448 PF11842 Domain of unknown function (DUF3362) Tharo_1452 PF02687 FtsX-like permease family Tharo_1452 PF12704 MacB-like periplasmic core domain Tharo_1453 PF00005 ABC transporter Tharo_1454 PF03772 Competence protein Tharo_1454 PF00753 Metallo-beta-lactamase superfamily Tharo_1456 PF03193 RsgA GTPase Tharo_1457 PF01435 Peptidase family M48 Tharo_1457 PF16491 CAAX prenyl protease N-terminal, five membrane helices Tharo_1458 PF00929 Exonuclease Tharo_1460 PF01197 Ribosomal protein L31 Tharo_1461 PF01207 Dihydrouridine synthase (Dus) Tharo_1462 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus Tharo_1462 PF05175 Methyltransferase small domain Tharo_1463 PF03695 Uncharacterised protein family (UPF0149) Tharo_1463 PF02810 SEC-C motif Tharo_1465 PF03692 Putative zinc- or iron-chelating domain Tharo_1471 PF00330 Aconitase family (aconitate hydratase) Tharo_1471 PF00694 Aconitase C-terminal domain Tharo_1472 PF00330 Aconitase family (aconitate hydratase) Tharo_1472 PF11791 Aconitate B N-terminal domain Tharo_1472 PF06434 Aconitate hydratase 2 N-terminus Tharo_1473 PF00563 EAL domain Tharo_1473 PF00990 Diguanylate cyclase, GGDEF domain Tharo_1473 PF03707 Bacterial signalling protein N terminal repeat Tharo_1477 PF00056 lactate/malate dehydrogenase, NAD binding domain Tharo_1477 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Tharo_1478 PF00392 Bacterial regulatory proteins, gntR family Tharo_1478 PF07702 UTRA domain Tharo_1481 PF02910 Fumarate reductase flavoprotein C-term Tharo_1481 PF00890 FAD binding domain Tharo_1482 PF13085 2Fe-2S iron-sulfur cluster binding domain Tharo_1483 PF03937 Flavinator of succinate dehydrogenase Tharo_1484 PF00285 Citrate synthase, C-terminal domain Tharo_1485 PF00676 Dehydrogenase E1 component Tharo_1485 PF02779 Transketolase, pyrimidine binding domain Tharo_1485 PF16078 2-oxoglutarate dehydrogenase N-terminus Tharo_1485 PF16870 2-oxoglutarate dehydrogenase C-terminal Tharo_1486 PF00364 Biotin-requiring enzyme Tharo_1486 PF02817 e3 binding domain Tharo_1486 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Tharo_1487 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tharo_1487 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tharo_1488 PF03969 AFG1-like ATPase Tharo_1489 PF13307 Helicase C-terminal domain Tharo_1489 PF04851 Type III restriction enzyme, res subunit Tharo_1490 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Tharo_1491 PF03453 MoeA N-terminal region (domain I and II) Tharo_1491 PF00994 Probable molybdopterin binding domain Tharo_1491 PF03454 MoeA C-terminal region (domain IV) Tharo_1492 PF02597 ThiS family Tharo_1493 PF02391 MoaE protein Tharo_1497 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tharo_1497 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tharo_1499 PF07859 alpha/beta hydrolase fold Tharo_1500 PF14437 MafB19-like deaminase Tharo_1501 PF03734 L,D-transpeptidase catalytic domain Tharo_1501 PF01476 LysM domain Tharo_1503 PF01571 Aminomethyltransferase folate-binding domain Tharo_1504 PF02618 YceG-like family Tharo_1505 PF02223 Thymidylate kinase Tharo_1506 PF09115 DNA polymerase III, delta subunit, C terminal Tharo_1508 PF01026 TatD related DNase Tharo_1510 PF01740 STAS domain Tharo_1510 PF00916 Sulfate permease family Tharo_1511 PF12833 Helix-turn-helix domain Tharo_1511 PF02311 AraC-like ligand binding domain Tharo_1512 PF07690 Major Facilitator Superfamily Tharo_1513 PF00941 FAD binding domain in molybdopterin dehydrogenase Tharo_1513 PF03450 CO dehydrogenase flavoprotein C-terminal domain Tharo_1514 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Tharo_1514 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Tharo_1515 PF01799 [2Fe-2S] binding domain Tharo_1515 PF00111 2Fe-2S iron-sulfur cluster binding domain Tharo_1516 PF12802 MarR family Tharo_1517 PF08406 CbbQ/NirQ/NorQ C-terminal Tharo_1517 PF07728 AAA domain (dynein-related subfamily) Tharo_1517 PF12556 Cobaltochelatase CobS subunit N terminal Tharo_1518 PF06213 Cobalamin biosynthesis protein CobT Tharo_1518 PF11775 Cobalamin biosynthesis protein CobT VWA domain Tharo_1519 PF08274 PhnA Zinc-Ribbon Tharo_1519 PF03831 PhnA domain Tharo_1520 PF01546 Peptidase family M20/M25/M40 Tharo_1520 PF07687 Peptidase dimerisation domain Tharo_1524 PF00925 GTP cyclohydrolase II Tharo_1525 PF06463 Molybdenum Cofactor Synthesis C Tharo_1525 PF04055 Radical SAM superfamily Tharo_1526 PF05362 Lon protease (S16) C-terminal proteolytic domain Tharo_1526 PF13654 AAA domain Tharo_1528 PF09997 Predicted membrane protein (DUF2238) Tharo_1530 PF00756 Putative esterase Tharo_1537 PF01471 Putative peptidoglycan binding domain Tharo_1537 PF13401 AAA domain Tharo_1543 PF00512 His Kinase A (phospho-acceptor) domain Tharo_1543 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_1544 PF00158 Sigma-54 interaction domain Tharo_1544 PF02954 Bacterial regulatory protein, Fis family Tharo_1544 PF00072 Response regulator receiver domain Tharo_1547 PF01883 Iron-sulfur cluster assembly protein Tharo_1548 PF00696 Amino acid kinase family Tharo_1550 PF00501 AMP-binding enzyme Tharo_1550 PF13193 AMP-binding enzyme C-terminal domain Tharo_1551 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Tharo_1551 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Tharo_1552 PF00011 Hsp20/alpha crystallin family Tharo_1554 PF00545 ribonuclease Tharo_1555 PF00462 Glutaredoxin Tharo_1556 PF00206 Lyase Tharo_1556 PF14698 Argininosuccinate lyase C-terminal Tharo_1557 PF00311 Phosphoenolpyruvate carboxylase Tharo_1558 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Tharo_1558 PF03900 Porphobilinogen deaminase, C-terminal domain Tharo_1559 PF02602 Uroporphyrinogen-III synthase HemD Tharo_1560 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase Tharo_1562 PF01218 Coproporphyrinogen III oxidase Tharo_1563 PF07411 Domain of unknown function (DUF1508) Tharo_1564 PF02844 Phosphoribosylglycinamide synthetase, N domain Tharo_1564 PF02843 Phosphoribosylglycinamide synthetase, C domain Tharo_1564 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Tharo_1565 PF02142 MGS-like domain Tharo_1565 PF01808 AICARFT/IMPCHase bienzyme Tharo_1566 PF02954 Bacterial regulatory protein, Fis family Tharo_1567 PF01207 Dihydrouridine synthase (Dus) Tharo_1568 PF00916 Sulfate permease family Tharo_1568 PF01740 STAS domain Tharo_1569 PF09334 tRNA synthetases class I (M) Tharo_1569 PF01588 Putative tRNA binding domain Tharo_1570 PF00691 OmpA family Tharo_1571 PF10609 NUBPL iron-transfer P-loop NTPase Tharo_1572 PF00692 dUTPase Tharo_1573 PF01276 Orn/Lys/Arg decarboxylase, major domain Tharo_1573 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain Tharo_1573 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Tharo_1574 PF00186 Dihydrofolate reductase Tharo_1575 PF00303 Thymidylate synthase Tharo_1583 PF13808 DDE_Tnp_1-associated Tharo_1583 PF01609 Transposase DDE domain Tharo_1586 PF13401 AAA domain Tharo_1586 PF01471 Putative peptidoglycan binding domain Tharo_1590 PF00155 Aminotransferase class I and II Tharo_1591 PF12344 Ultra-violet resistance protein B Tharo_1591 PF17757 UvrB interaction domain Tharo_1591 PF00271 Helicase conserved C-terminal domain Tharo_1591 PF04851 Type III restriction enzyme, res subunit Tharo_1591 PF02151 UvrB/uvrC motif Tharo_1592 PF01451 Low molecular weight phosphotyrosine protein phosphatase Tharo_1593 PF12111 Polyribonucleotide phosphorylase C terminal Tharo_1593 PF10150 Ribonuclease E/G family Tharo_1593 PF00575 S1 RNA binding domain Tharo_1594 PF00849 RNA pseudouridylate synthase Tharo_1594 PF01479 S4 domain Tharo_1596 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tharo_1597 PF02545 Maf-like protein Tharo_1598 PF02620 Large ribosomal RNA subunit accumulation protein YceD Tharo_1599 PF01783 Ribosomal L32p protein family Tharo_1600 PF02504 Fatty acid synthesis protein Tharo_1601 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Tharo_1601 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Tharo_1602 PF00698 Acyl transferase domain Tharo_1604 PF00550 Phosphopantetheine attachment site Tharo_1605 PF00109 Beta-ketoacyl synthase, N-terminal domain Tharo_1605 PF02801 Beta-ketoacyl synthase, C-terminal domain Tharo_1607 PF00890 FAD binding domain Tharo_1607 PF02910 Fumarate reductase flavoprotein C-term Tharo_1608 PF04542 Sigma-70 region 2 Tharo_1608 PF08281 Sigma-70, region 4 Tharo_1610 PF17188 MucB/RseB C-terminal domain Tharo_1610 PF03888 MucB/RseB N-terminal domain Tharo_1612 PF13180 PDZ domain Tharo_1614 PF00009 Elongation factor Tu GTP binding domain Tharo_1614 PF00679 Elongation factor G C-terminus Tharo_1614 PF06421 GTP-binding protein LepA C-terminus Tharo_1614 PF03144 Elongation factor Tu domain 2 Tharo_1615 PF10502 Signal peptidase, peptidase S26 Tharo_1617 PF00035 Double-stranded RNA binding motif Tharo_1617 PF14622 Ribonuclease-III-like Tharo_1618 PF07650 KH domain Tharo_1618 PF01926 50S ribosome-binding GTPase Tharo_1619 PF11967 Recombination protein O N terminal Tharo_1619 PF02565 Recombination protein O C terminal Tharo_1620 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Tharo_1621 PF01648 4'-phosphopantetheinyl transferase superfamily Tharo_1622 PF00933 Glycosyl hydrolase family 3 N terminal domain Tharo_1623 PF08459 UvrC Helix-hairpin-helix N-terminal Tharo_1623 PF01541 GIY-YIG catalytic domain Tharo_1623 PF02151 UvrB/uvrC motif Tharo_1627 PF01435 Peptidase family M48 Tharo_1628 PF04011 LemA family Tharo_1629 PF16199 Radical_SAM C-terminal domain Tharo_1629 PF04055 Radical SAM superfamily Tharo_1630 PF01053 Cys/Met metabolism PLP-dependent enzyme Tharo_1632 PF00342 Phosphoglucose isomerase Tharo_1633 PF01066 CDP-alcohol phosphatidyltransferase Tharo_1640 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain Tharo_1640 PF00293 NUDIX domain Tharo_1640 PF09297 NADH pyrophosphatase zinc ribbon domain Tharo_1642 PF00593 TonB dependent receptor Tharo_1642 PF07715 TonB-dependent Receptor Plug Domain Tharo_1645 PF00005 ABC transporter Tharo_1651 PF02627 Carboxymuconolactone decarboxylase family Tharo_1652 PF02649 Type I GTP cyclohydrolase folE2 Tharo_1653 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Tharo_1653 PF02779 Transketolase, pyrimidine binding domain Tharo_1653 PF02780 Transketolase, C-terminal domain Tharo_1654 PF00348 Polyprenyl synthetase Tharo_1655 PF02609 Exonuclease VII small subunit Tharo_1658 PF02401 LytB protein Tharo_1659 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Tharo_1660 PF01252 Signal peptidase (SPase) II Tharo_1661 PF00133 tRNA synthetases class I (I, L, M and V) Tharo_1661 PF06827 Zinc finger found in FPG and IleRS Tharo_1661 PF08264 Anticodon-binding domain of tRNA Tharo_1662 PF06574 FAD synthetase Tharo_1662 PF01687 Riboflavin kinase Tharo_1663 PF11741 AMIN domain Tharo_1663 PF01520 N-acetylmuramoyl-L-alanine amidase Tharo_1664 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Tharo_1665 PF08331 Domain of unknown function (DUF1730) Tharo_1667 PF05981 CreA protein Tharo_1668 PF01212 Beta-eliminating lyase Tharo_1670 PF12392 Collagenase Tharo_1670 PF01136 Peptidase family U32 Tharo_1672 PF07995 Glucose / Sorbosone dehydrogenase Tharo_1673 PF01219 Prokaryotic diacylglycerol kinase Tharo_1674 PF05951 Bacterial protein of unknown function (DUF882) Tharo_1675 PF01471 Putative peptidoglycan binding domain Tharo_1675 PF03734 L,D-transpeptidase catalytic domain Tharo_1679 PF00072 Response regulator receiver domain Tharo_1682 PF00892 EamA-like transporter family Tharo_1683 PF00005 ABC transporter Tharo_1683 PF12848 ABC transporter Tharo_1684 PF00175 Oxidoreductase NAD-binding domain Tharo_1684 PF00970 Oxidoreductase FAD-binding domain Tharo_1685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_1685 PF03466 LysR substrate binding domain Tharo_1686 PF03023 Lipid II flippase MurJ Tharo_1687 PF01649 Ribosomal protein S20 Tharo_1689 PF00202 Aminotransferase class-III Tharo_1690 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Tharo_1690 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Tharo_1691 PF00764 Arginosuccinate synthase Tharo_1693 PF06865 Pyrimidine/purine nucleoside phosphorylase Tharo_1694 PF04461 Protein of unknown function (DUF520) Tharo_1701 PF00293 NUDIX domain Tharo_1703 PF00108 Thiolase, N-terminal domain Tharo_1703 PF02803 Thiolase, C-terminal domain Tharo_1704 PF01641 SelR domain Tharo_1706 PF03618 Kinase/pyrophosphorylase Tharo_1707 PF02896 PEP-utilising enzyme, TIM barrel domain Tharo_1707 PF00391 PEP-utilising enzyme, mobile domain Tharo_1707 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Tharo_1708 PF03707 Bacterial signalling protein N terminal repeat Tharo_1708 PF00563 EAL domain Tharo_1708 PF00990 Diguanylate cyclase, GGDEF domain Tharo_1709 PF05681 Fumarate hydratase (Fumerase) Tharo_1709 PF05683 Fumarase C-terminus Tharo_1710 PF13193 AMP-binding enzyme C-terminal domain Tharo_1710 PF00501 AMP-binding enzyme Tharo_1710 PF16177 Acetyl-coenzyme A synthetase N-terminus Tharo_1712 PF00672 HAMP domain Tharo_1712 PF00989 PAS fold Tharo_1712 PF00512 His Kinase A (phospho-acceptor) domain Tharo_1712 PF18698 Histidine kinase sensor domain Tharo_1712 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_1713 PF00072 Response regulator receiver domain Tharo_1713 PF00486 Transcriptional regulatory protein, C terminal Tharo_1714 PF00929 Exonuclease Tharo_1715 PF00474 Sodium:solute symporter family Tharo_1717 PF02861 Clp amino terminal domain, pathogenicity island component Tharo_1717 PF17871 AAA lid domain Tharo_1717 PF10431 C-terminal, D2-small domain, of ClpB protein Tharo_1717 PF00004 ATPase family associated with various cellular activities (AAA) Tharo_1717 PF07724 AAA domain (Cdc48 subfamily) Tharo_1718 PF05698 Bacterial trigger factor protein (TF) C-terminus Tharo_1720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tharo_1721 PF00528 Binding-protein-dependent transport system inner membrane component Tharo_1722 PF00528 Binding-protein-dependent transport system inner membrane component Tharo_1722 PF12911 N-terminal TM domain of oligopeptide transport permease C Tharo_1723 PF02696 Uncharacterized ACR, YdiU/UPF0061 family Tharo_1725 PF07690 Major Facilitator Superfamily Tharo_1726 PF07690 Major Facilitator Superfamily Tharo_1727 PF14710 Respiratory nitrate reductase alpha N-terminal Tharo_1727 PF00384 Molybdopterin oxidoreductase Tharo_1727 PF01568 Molydopterin dinucleotide binding domain Tharo_1728 PF13247 4Fe-4S dicluster domain Tharo_1728 PF14711 Respiratory nitrate reductase beta C-terminal Tharo_1729 PF02613 Nitrate reductase delta subunit Tharo_1730 PF02665 Nitrate reductase gamma subunit Tharo_1731 PF07730 Histidine kinase Tharo_1731 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_1731 PF00672 HAMP domain Tharo_1731 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Tharo_1732 PF00072 Response regulator receiver domain Tharo_1732 PF00196 Bacterial regulatory proteins, luxR family Tharo_1735 PF01668 SmpB protein Tharo_1737 PF03658 RnfH family Ubiquitin Tharo_1738 PF00478 IMP dehydrogenase / GMP reductase domain Tharo_1738 PF00571 CBS domain Tharo_1739 PF00958 GMP synthase C terminal domain Tharo_1739 PF02540 NAD synthase Tharo_1739 PF00117 Glutamine amidotransferase class-I Tharo_1740 PF00271 Helicase conserved C-terminal domain Tharo_1740 PF00176 SNF2 family N-terminal domain Tharo_1742 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tharo_1742 PF14824 Sirohaem biosynthesis protein central Tharo_1742 PF10414 Sirohaem synthase dimerisation region Tharo_1743 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Tharo_1744 PF03264 NapC/NirT cytochrome c family, N-terminal region Tharo_1745 PF09459 Ethylbenzene dehydrogenase Tharo_1747 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Tharo_1750 PF17805 AsnC-like ligand binding domain Tharo_1750 PF13404 AsnC-type helix-turn-helix domain Tharo_1751 PF17805 AsnC-like ligand binding domain Tharo_1752 PF06463 Molybdenum Cofactor Synthesis C Tharo_1752 PF04055 Radical SAM superfamily Tharo_1758 PF00953 Glycosyl transferase family 4 Tharo_1758 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Tharo_1759 PF07728 AAA domain (dynein-related subfamily) Tharo_1759 PF08406 CbbQ/NirQ/NorQ C-terminal Tharo_1761 PF00510 Cytochrome c oxidase subunit III Tharo_1762 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Tharo_1762 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Tharo_1763 PF00115 Cytochrome C and Quinol oxidase polypeptide I Tharo_1764 PF00034 Cytochrome c Tharo_1766 PF01180 Dihydroorotate dehydrogenase Tharo_1767 PF04377 Arginine-tRNA-protein transferase, C terminus Tharo_1767 PF04376 Arginine-tRNA-protein transferase, N terminus Tharo_1768 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Tharo_1769 PF08402 TOBE domain Tharo_1769 PF00005 ABC transporter Tharo_1770 PF00528 Binding-protein-dependent transport system inner membrane component Tharo_1771 PF13416 Bacterial extracellular solute-binding protein Tharo_1774 PF00877 NlpC/P60 family Tharo_1777 PF13638 PIN domain Tharo_1777 PF02562 PhoH-like protein Tharo_1778 PF00578 AhpC/TSA family Tharo_1780 PF00155 Aminotransferase class I and II Tharo_1781 PF03447 Homoserine dehydrogenase, NAD binding domain Tharo_1781 PF01842 ACT domain Tharo_1781 PF00742 Homoserine dehydrogenase Tharo_1782 PF03473 MOSC domain Tharo_1782 PF03475 3-alpha domain Tharo_1784 PF07311 Dodecin Tharo_1785 PF00291 Pyridoxal-phosphate dependent enzyme Tharo_1785 PF14821 Threonine synthase N terminus Tharo_1786 PF03776 Septum formation topological specificity factor MinE Tharo_1787 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tharo_1788 PF03775 Septum formation inhibitor MinC, C-terminal domain Tharo_1788 PF05209 Septum formation inhibitor MinC, N-terminal domain Tharo_1789 PF01430 Hsp33 protein Tharo_1790 PF03960 ArsC family Tharo_1791 PF16921 Tex protein YqgF-like domain Tharo_1791 PF09371 Tex-like protein N-terminal domain Tharo_1791 PF00575 S1 RNA binding domain Tharo_1791 PF17674 HHH domain Tharo_1793 PF00583 Acetyltransferase (GNAT) family Tharo_1793 PF13380 CoA binding domain Tharo_1793 PF13607 Succinyl-CoA ligase like flavodoxin domain Tharo_1795 PF00581 Rhodanese-like domain Tharo_1796 PF00586 AIR synthase related protein, N-terminal domain Tharo_1796 PF02769 AIR synthase related protein, C-terminal domain Tharo_1797 PF13472 GDSL-like Lipase/Acylhydrolase family Tharo_1798 PF00005 ABC transporter Tharo_1800 PF00793 DAHP synthetase I family Tharo_1801 PF03352 Methyladenine glycosylase Tharo_1804 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Tharo_1804 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Tharo_1806 PF01292 Prokaryotic cytochrome b561 Tharo_1811 PF01494 FAD binding domain Tharo_1814 PF02653 Branched-chain amino acid transport system / permease component Tharo_1815 PF02653 Branched-chain amino acid transport system / permease component Tharo_1815 PF11862 Domain of unknown function (DUF3382) Tharo_1816 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tharo_1816 PF00005 ABC transporter Tharo_1817 PF00005 ABC transporter Tharo_1818 PF03466 LysR substrate binding domain Tharo_1818 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_1819 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tharo_1819 PF02770 Acyl-CoA dehydrogenase, middle domain Tharo_1819 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tharo_1820 PF02515 CoA-transferase family III Tharo_1821 PF01012 Electron transfer flavoprotein domain Tharo_1822 PF00766 Electron transfer flavoprotein FAD-binding domain Tharo_1822 PF01012 Electron transfer flavoprotein domain Tharo_1823 PF00989 PAS fold Tharo_1823 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_1823 PF00512 His Kinase A (phospho-acceptor) domain Tharo_1824 PF02954 Bacterial regulatory protein, Fis family Tharo_1824 PF00072 Response regulator receiver domain Tharo_1824 PF00158 Sigma-54 interaction domain Tharo_1827 PF02653 Branched-chain amino acid transport system / permease component Tharo_1829 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tharo_1829 PF00005 ABC transporter Tharo_1830 PF00005 ABC transporter Tharo_1831 PF00465 Iron-containing alcohol dehydrogenase Tharo_1832 PF00171 Aldehyde dehydrogenase family Tharo_1833 PF00465 Iron-containing alcohol dehydrogenase Tharo_1835 PF01266 FAD dependent oxidoreductase Tharo_1836 PF16868 NMT1-like family Tharo_1839 PF02743 Cache domain Tharo_1839 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_1839 PF00512 His Kinase A (phospho-acceptor) domain Tharo_1840 PF00158 Sigma-54 interaction domain Tharo_1840 PF00072 Response regulator receiver domain Tharo_1840 PF02954 Bacterial regulatory protein, Fis family Tharo_1843 PF03009 Glycerophosphoryl diester phosphodiesterase family Tharo_1844 PF13406 Transglycosylase SLT domain Tharo_1846 PF07729 FCD domain Tharo_1846 PF00392 Bacterial regulatory proteins, gntR family Tharo_1847 PF01526 Tn3 transposase DDE domain Tharo_1847 PF13700 Domain of unknown function (DUF4158) Tharo_1850 PF13411 MerR HTH family regulatory protein Tharo_1852 PF00512 His Kinase A (phospho-acceptor) domain Tharo_1852 PF00672 HAMP domain Tharo_1852 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_1853 PF00486 Transcriptional regulatory protein, C terminal Tharo_1853 PF00072 Response regulator receiver domain Tharo_1859 PF00873 AcrB/AcrD/AcrF family Tharo_1864 PF02754 Cysteine-rich domain Tharo_1865 PF11870 Domain of unknown function (DUF3390) Tharo_1865 PF13183 4Fe-4S dicluster domain Tharo_1865 PF02589 LUD domain Tharo_1866 PF02589 LUD domain Tharo_1868 PF00583 Acetyltransferase (GNAT) family Tharo_1868 PF13380 CoA binding domain Tharo_1868 PF13607 Succinyl-CoA ligase like flavodoxin domain Tharo_1870 PF03480 Bacterial extracellular solute-binding protein, family 7 Tharo_1871 PF00378 Enoyl-CoA hydratase/isomerase Tharo_1872 PF13193 AMP-binding enzyme C-terminal domain Tharo_1872 PF00501 AMP-binding enzyme Tharo_1873 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tharo_1873 PF02770 Acyl-CoA dehydrogenase, middle domain Tharo_1873 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tharo_1875 PF00378 Enoyl-CoA hydratase/isomerase Tharo_1878 PF00378 Enoyl-CoA hydratase/isomerase Tharo_1879 PF08362 YcdC-like protein, C-terminal region Tharo_1879 PF00440 Bacterial regulatory proteins, tetR family Tharo_1881 PF00691 OmpA family Tharo_1882 PF01979 Amidohydrolase family Tharo_1883 PF00069 Protein kinase domain Tharo_1883 PF03793 PASTA domain Tharo_1884 PF00762 Ferrochelatase Tharo_1885 PF01628 HrcA protein C terminal domain Tharo_1885 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Tharo_1886 PF01513 ATP-NAD kinase Tharo_1887 PF02463 RecF/RecN/SMC N terminal domain Tharo_1888 PF01475 Ferric uptake regulator family Tharo_1889 PF04355 SmpA / OmlA family Tharo_1890 PF01113 Dihydrodipicolinate reductase, N-terminus Tharo_1890 PF05173 Dihydrodipicolinate reductase, C-terminus Tharo_1891 PF00672 HAMP domain Tharo_1891 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_1891 PF00512 His Kinase A (phospho-acceptor) domain Tharo_1891 PF01627 Hpt domain Tharo_1891 PF00072 Response regulator receiver domain Tharo_1891 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Tharo_1892 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Tharo_1892 PF00117 Glutamine amidotransferase class-I Tharo_1893 PF02142 MGS-like domain Tharo_1893 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tharo_1893 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Tharo_1894 PF01272 Transcription elongation factor, GreA/GreB, C-term Tharo_1894 PF03449 Transcription elongation factor, N-terminal Tharo_1895 PF01985 CRS1 / YhbY (CRM) domain Tharo_1896 PF01728 FtsJ-like methyltransferase Tharo_1897 PF00004 ATPase family associated with various cellular activities (AAA) Tharo_1897 PF17862 AAA+ lid domain Tharo_1897 PF06480 FtsH Extracellular Tharo_1897 PF01434 Peptidase family M41 Tharo_1898 PF00809 Pterin binding enzyme Tharo_1899 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tharo_1899 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tharo_1899 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tharo_1899 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tharo_1900 PF12849 PBP superfamily domain Tharo_1901 PF00528 Binding-protein-dependent transport system inner membrane component Tharo_1902 PF00528 Binding-protein-dependent transport system inner membrane component Tharo_1903 PF00005 ABC transporter Tharo_1904 PF01545 Cation efflux family Tharo_1906 PF01758 Sodium Bile acid symporter family Tharo_1907 PF02374 Anion-transporting ATPase Tharo_1908 PF06953 Arsenical resistance operon trans-acting repressor ArsD Tharo_1909 PF01451 Low molecular weight phosphotyrosine protein phosphatase Tharo_1911 PF00121 Triosephosphate isomerase Tharo_1912 PF03840 Preprotein translocase SecG subunit Tharo_1914 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Tharo_1915 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Tharo_1916 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Tharo_1917 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Tharo_1919 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tharo_1919 PF10531 SLBB domain Tharo_1919 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tharo_1920 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal Tharo_1920 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tharo_1920 PF00384 Molybdopterin oxidoreductase Tharo_1921 PF00146 NADH dehydrogenase Tharo_1922 PF12838 4Fe-4S dicluster domain Tharo_1923 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Tharo_1924 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Tharo_1925 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Tharo_1925 PF00361 Proton-conducting membrane transporter Tharo_1926 PF00361 Proton-conducting membrane transporter Tharo_1926 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus Tharo_1927 PF00361 Proton-conducting membrane transporter Tharo_1928 PF00293 NUDIX domain Tharo_1929 PF00795 Carbon-nitrogen hydrolase Tharo_1929 PF02540 NAD synthase Tharo_1930 PF00543 Nitrogen regulatory protein P-II Tharo_1931 PF01713 Smr domain Tharo_1932 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tharo_1933 PF00027 Cyclic nucleotide-binding domain Tharo_1933 PF13545 Crp-like helix-turn-helix domain Tharo_1934 PF09397 Ftsk gamma domain Tharo_1934 PF01580 FtsK/SpoIIIE family Tharo_1934 PF17854 FtsK alpha domain Tharo_1934 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Tharo_1935 PF03548 Outer membrane lipoprotein carrier protein LolA Tharo_1936 PF00004 ATPase family associated with various cellular activities (AAA) Tharo_1936 PF12002 MgsA AAA+ ATPase C terminal Tharo_1936 PF16193 AAA C-terminal domain Tharo_1938 PF02403 Seryl-tRNA synthetase N-terminal domain Tharo_1938 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tharo_1939 PF01464 Transglycosylase SLT domain Tharo_1939 PF00497 Bacterial extracellular solute-binding proteins, family 3 Tharo_1940 PF01050 Mannose-6-phosphate isomerase Tharo_1940 PF00483 Nucleotidyl transferase Tharo_1944 PF01850 PIN domain Tharo_1945 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Tharo_1947 PF00990 Diguanylate cyclase, GGDEF domain Tharo_1947 PF03707 Bacterial signalling protein N terminal repeat Tharo_1947 PF00563 EAL domain Tharo_1948 PF17757 UvrB interaction domain Tharo_1948 PF02559 CarD-like/TRCF domain Tharo_1948 PF00270 DEAD/DEAH box helicase Tharo_1948 PF00271 Helicase conserved C-terminal domain Tharo_1948 PF03461 TRCF domain Tharo_1950 PF01871 AMMECR1 Tharo_1951 PF01875 Memo-like protein Tharo_1952 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tharo_1953 PF02542 YgbB family Tharo_1956 PF06167 Glucose-regulated metallo-peptidase M90 Tharo_1957 PF13291 ACT domain Tharo_1957 PF04607 Region found in RelA / SpoT proteins Tharo_1957 PF02824 TGS domain Tharo_1958 PF17941 Polyphosphate kinase C-terminal domain 1 Tharo_1958 PF13090 Polyphosphate kinase C-terminal domain 2 Tharo_1958 PF02503 Polyphosphate kinase middle domain Tharo_1958 PF13089 Polyphosphate kinase N-terminal domain Tharo_1959 PF02541 Ppx/GppA phosphatase family Tharo_1960 PF02405 Permease MlaE Tharo_1961 PF00005 ABC transporter Tharo_1964 PF13193 AMP-binding enzyme C-terminal domain Tharo_1964 PF00501 AMP-binding enzyme Tharo_1965 PF00378 Enoyl-CoA hydratase/isomerase Tharo_1966 PF01026 TatD related DNase Tharo_1968 PF12806 Acetyl-CoA dehydrogenase C-terminal like Tharo_1968 PF02770 Acyl-CoA dehydrogenase, middle domain Tharo_1968 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tharo_1968 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tharo_1971 PF03795 YCII-related domain Tharo_1972 PF04279 Intracellular septation protein A Tharo_1973 PF00512 His Kinase A (phospho-acceptor) domain Tharo_1973 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_1973 PF00672 HAMP domain Tharo_1974 PF00072 Response regulator receiver domain Tharo_1974 PF00486 Transcriptional regulatory protein, C terminal Tharo_1976 PF00814 Glycoprotease family Tharo_1977 PF00583 Acetyltransferase (GNAT) family Tharo_1978 PF03167 Uracil DNA glycosylase superfamily Tharo_1979 PF07690 Major Facilitator Superfamily Tharo_1980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_1980 PF03466 LysR substrate binding domain Tharo_1981 PF18073 Rubredoxin metal binding domain Tharo_1982 PF00082 Subtilase family Tharo_1982 PF03797 Autotransporter beta-domain Tharo_1982 PF12951 Passenger-associated-transport-repeat Tharo_1984 PF00374 Nickel-dependent hydrogenase Tharo_1985 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Tharo_1986 PF12838 4Fe-4S dicluster domain Tharo_1986 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tharo_1986 PF01568 Molydopterin dinucleotide binding domain Tharo_1986 PF00384 Molybdopterin oxidoreductase Tharo_1986 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tharo_1987 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tharo_1987 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tharo_1989 PF03109 ABC1 family Tharo_1990 PF01594 AI-2E family transporter Tharo_1991 PF04341 Protein of unknown function, DUF485 Tharo_1992 PF00474 Sodium:solute symporter family Tharo_1993 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_1993 PF00672 HAMP domain Tharo_1993 PF00512 His Kinase A (phospho-acceptor) domain Tharo_1994 PF00072 Response regulator receiver domain Tharo_1994 PF00486 Transcriptional regulatory protein, C terminal Tharo_1995 PF13194 Domain of unknown function (DUF4010) Tharo_1996 PF02817 e3 binding domain Tharo_1996 PF00364 Biotin-requiring enzyme Tharo_1996 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Tharo_1997 PF07690 Major Facilitator Superfamily Tharo_1999 PF02607 B12 binding domain Tharo_1999 PF02310 B12 binding domain Tharo_2000 PF01208 Uroporphyrinogen decarboxylase (URO-D) Tharo_2004 PF01979 Amidohydrolase family Tharo_2010 PF10017 Histidine-specific methyltransferase, SAM-dependent Tharo_2011 PF03781 Sulfatase-modifying factor enzyme 1 Tharo_2012 PF00534 Glycosyl transferases group 1 Tharo_2014 PF00005 ABC transporter Tharo_2015 PF00528 Binding-protein-dependent transport system inner membrane component Tharo_2016 PF00528 Binding-protein-dependent transport system inner membrane component Tharo_2018 PF13657 HipA N-terminal domain Tharo_2018 PF07804 HipA-like C-terminal domain Tharo_2025 PF04321 RmlD substrate binding domain Tharo_2026 PF16363 GDP-mannose 4,6 dehydratase Tharo_2029 PF12704 MacB-like periplasmic core domain Tharo_2029 PF02687 FtsX-like permease family Tharo_2029 PF00005 ABC transporter Tharo_2032 PF01593 Flavin containing amine oxidoreductase Tharo_2033 PF00570 HRDC domain Tharo_2033 PF13361 UvrD-like helicase C-terminal domain Tharo_2034 PF18027 Cytosolic carboxypeptidase N-terminal domain Tharo_2034 PF00246 Zinc carboxypeptidase Tharo_2035 PF03883 Peroxide stress protein YaaA Tharo_2037 PF00202 Aminotransferase class-III Tharo_2038 PF00155 Aminotransferase class I and II Tharo_2039 PF12697 Alpha/beta hydrolase family Tharo_2040 PF08241 Methyltransferase domain Tharo_2046 PF02463 RecF/RecN/SMC N terminal domain Tharo_2047 PF01850 PIN domain Tharo_2048 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Tharo_2052 PF08032 RNA 2'-O ribose methyltransferase substrate binding Tharo_2052 PF00588 SpoU rRNA Methylase family Tharo_2053 PF01351 Ribonuclease HII Tharo_2054 PF02684 Lipid-A-disaccharide synthetase Tharo_2055 PF00132 Bacterial transferase hexapeptide (six repeats) Tharo_2055 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Tharo_2056 PF07977 FabA-like domain Tharo_2057 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Tharo_2057 PF14602 Hexapeptide repeat of succinyl-transferase Tharo_2057 PF00132 Bacterial transferase hexapeptide (six repeats) Tharo_2059 PF01103 Surface antigen Tharo_2059 PF07244 Surface antigen variable number repeat Tharo_2060 PF02163 Peptidase family M50 Tharo_2060 PF17820 PDZ domain Tharo_2061 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Tharo_2061 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Tharo_2061 PF13288 DXP reductoisomerase C-terminal domain Tharo_2063 PF01255 Putative undecaprenyl diphosphate synthase Tharo_2064 PF01765 Ribosome recycling factor Tharo_2065 PF00696 Amino acid kinase family Tharo_2066 PF00889 Elongation factor TS Tharo_2067 PF00318 Ribosomal protein S2 Tharo_2068 PF00557 Metallopeptidase family M24 Tharo_2069 PF01966 HD domain Tharo_2069 PF08335 GlnD PII-uridylyltransferase Tharo_2070 PF01048 Phosphorylase superfamily Tharo_2072 PF00483 Nucleotidyl transferase Tharo_2073 PF00533 BRCA1 C Terminus (BRCT) domain Tharo_2073 PF01653 NAD-dependent DNA ligase adenylation domain Tharo_2073 PF12826 Helix-hairpin-helix motif Tharo_2073 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Tharo_2073 PF03120 NAD-dependent DNA ligase OB-fold domain Tharo_2075 PF02463 RecF/RecN/SMC N terminal domain Tharo_2076 PF00155 Aminotransferase class I and II Tharo_2077 PF00132 Bacterial transferase hexapeptide (six repeats) Tharo_2077 PF14602 Hexapeptide repeat of succinyl-transferase Tharo_2077 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal Tharo_2078 PF00437 Type II/IV secretion system protein Tharo_2079 PF07687 Peptidase dimerisation domain Tharo_2079 PF01546 Peptidase family M20/M25/M40 Tharo_2080 PF05175 Methyltransferase small domain Tharo_2081 PF04384 Iron-sulphur cluster assembly Tharo_2082 PF00111 2Fe-2S iron-sulfur cluster binding domain Tharo_2083 PF00012 Hsp70 protein Tharo_2084 PF07743 HSCB C-terminal oligomerisation domain Tharo_2085 PF01521 Iron-sulphur cluster biosynthesis Tharo_2086 PF01592 NifU-like N terminal domain Tharo_2087 PF00266 Aminotransferase class-V Tharo_2088 PF00266 Aminotransferase class-V Tharo_2089 PF02082 Transcriptional regulator Tharo_2090 PF00132 Bacterial transferase hexapeptide (six repeats) Tharo_2091 PF00588 SpoU rRNA Methylase family Tharo_2092 PF00459 Inositol monophosphatase family Tharo_2106 PF00959 Phage lysozyme Tharo_2123 PF03592 Terminase small subunit Tharo_2123 PF10668 Phage terminase small subunit Tharo_2129 PF08346 AntA/AntB antirepressor Tharo_2129 PF10548 P22AR C-terminal domain Tharo_2145 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system Tharo_2151 PF00145 C-5 cytosine-specific DNA methylase Tharo_2160 PF05190 MutS family domain IV Tharo_2160 PF01624 MutS domain I Tharo_2160 PF05188 MutS domain II Tharo_2160 PF05192 MutS domain III Tharo_2160 PF00488 MutS domain V Tharo_2163 PF00571 CBS domain Tharo_2164 PF00929 Exonuclease Tharo_2165 PF00075 RNase H Tharo_2166 PF08241 Methyltransferase domain Tharo_2167 PF00753 Metallo-beta-lactamase superfamily Tharo_2167 PF16123 Hydroxyacylglutathione hydrolase C-terminus Tharo_2168 PF01464 Transglycosylase SLT domain Tharo_2168 PF01476 LysM domain Tharo_2169 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tharo_2169 PF00005 ABC transporter Tharo_2170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Tharo_2171 PF00578 AhpC/TSA family Tharo_2172 PF01726 LexA DNA binding domain Tharo_2172 PF00717 Peptidase S24-like Tharo_2175 PF00072 Response regulator receiver domain Tharo_2175 PF01966 HD domain Tharo_2184 PF01571 Aminomethyltransferase folate-binding domain Tharo_2184 PF08669 Glycine cleavage T-protein C-terminal barrel domain Tharo_2185 PF01597 Glycine cleavage H-protein Tharo_2186 PF02347 Glycine cleavage system P-protein Tharo_2188 PF07238 PilZ domain Tharo_2188 PF03552 Cellulose synthase Tharo_2188 PF00535 Glycosyl transferase family 2 Tharo_2189 PF00365 Phosphofructokinase Tharo_2190 PF05191 Adenylate kinase, active site lid Tharo_2191 PF02348 Cytidylyltransferase Tharo_2192 PF03966 Trm112p-like protein Tharo_2193 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Tharo_2194 PF02472 Biopolymer transport protein ExbD/TolR Tharo_2195 PF01618 MotA/TolQ/ExbB proton channel family Tharo_2196 PF02601 Exonuclease VII, large subunit Tharo_2196 PF13742 OB-fold nucleic acid binding domain Tharo_2197 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Tharo_2197 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Tharo_2198 PF00849 RNA pseudouridylate synthase Tharo_2198 PF04287 tRNA pseudouridine synthase C Tharo_2199 PF00923 Transaldolase/Fructose-6-phosphate aldolase Tharo_2201 PF02508 Rnf-Nqr subunit, membrane protein Tharo_2202 PF04060 Putative Fe-S cluster Tharo_2203 PF13237 4Fe-4S dicluster domain Tharo_2203 PF10531 SLBB domain Tharo_2203 PF13375 RnfC Barrel sandwich hybrid domain Tharo_2203 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tharo_2204 PF03116 NQR2, RnfD, RnfE family Tharo_2205 PF04205 FMN-binding domain Tharo_2206 PF02508 Rnf-Nqr subunit, membrane protein Tharo_2207 PF00730 HhH-GPD superfamily base excision DNA repair protein Tharo_2207 PF00633 Helix-hairpin-helix motif Tharo_2207 PF10576 Iron-sulfur binding domain of endonuclease III Tharo_2210 PF01810 LysE type translocator Tharo_2212 PF00730 HhH-GPD superfamily base excision DNA repair protein Tharo_2212 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain Tharo_2213 PF12833 Helix-turn-helix domain Tharo_2213 PF02805 Metal binding domain of Ada Tharo_2213 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Tharo_2213 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Tharo_2214 PF04055 Radical SAM superfamily Tharo_2215 PF00034 Cytochrome c Tharo_2216 PF00034 Cytochrome c Tharo_2217 PF00004 ATPase family associated with various cellular activities (AAA) Tharo_2217 PF17862 AAA+ lid domain Tharo_2217 PF01434 Peptidase family M41 Tharo_2220 PF00654 Voltage gated chloride channel Tharo_2222 PF00355 Rieske [2Fe-2S] domain Tharo_2223 PF00111 2Fe-2S iron-sulfur cluster binding domain Tharo_2223 PF00175 Oxidoreductase NAD-binding domain Tharo_2224 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_2224 PF00183 Hsp90 protein Tharo_2225 PF01272 Transcription elongation factor, GreA/GreB, C-term Tharo_2225 PF03449 Transcription elongation factor, N-terminal Tharo_2227 PF00364 Biotin-requiring enzyme Tharo_2227 PF00561 alpha/beta hydrolase fold Tharo_2231 PF04151 Bacterial pre-peptidase C-terminal domain Tharo_2231 PF00082 Subtilase family Tharo_2233 PF00665 Integrase core domain Tharo_2233 PF13333 Integrase core domain Tharo_2233 PF13276 HTH-like domain Tharo_2235 PF03958 Bacterial type II/III secretion system short domain Tharo_2235 PF00263 Bacterial type II and III secretion system protein Tharo_2241 PF07963 Prokaryotic N-terminal methylation motif Tharo_2243 PF08334 Type II secretion system (T2SS), protein G Tharo_2243 PF07963 Prokaryotic N-terminal methylation motif Tharo_2244 PF00482 Type II secretion system (T2SS), protein F Tharo_2245 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Tharo_2245 PF00437 Type II/IV secretion system protein Tharo_2246 PF04989 Cephalosporin hydroxylase Tharo_2249 PF08447 PAS fold Tharo_2249 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tharo_2250 PF01739 CheR methyltransferase, SAM binding domain Tharo_2250 PF03705 CheR methyltransferase, all-alpha domain Tharo_2251 PF03975 CheD chemotactic sensory transduction Tharo_2252 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tharo_2252 PF08447 PAS fold Tharo_2253 PF00512 His Kinase A (phospho-acceptor) domain Tharo_2253 PF00989 PAS fold Tharo_2253 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_2254 PF00196 Bacterial regulatory proteins, luxR family Tharo_2254 PF00072 Response regulator receiver domain Tharo_2255 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tharo_2255 PF01568 Molydopterin dinucleotide binding domain Tharo_2255 PF00384 Molybdopterin oxidoreductase Tharo_2256 PF03916 Polysulphide reductase, NrfD Tharo_2257 PF13247 4Fe-4S dicluster domain Tharo_2258 PF00317 Ribonucleotide reductase, all-alpha domain Tharo_2258 PF03477 ATP cone domain Tharo_2258 PF02867 Ribonucleotide reductase, barrel domain Tharo_2262 PF00115 Cytochrome C and Quinol oxidase polypeptide I Tharo_2264 PF01329 Pterin 4 alpha carbinolamine dehydratase Tharo_2265 PF01979 Amidohydrolase family Tharo_2266 PF00072 Response regulator receiver domain Tharo_2266 PF01339 CheB methylesterase Tharo_2267 PF03975 CheD chemotactic sensory transduction Tharo_2268 PF01739 CheR methyltransferase, SAM binding domain Tharo_2268 PF03705 CheR methyltransferase, all-alpha domain Tharo_2269 PF01584 CheW-like domain Tharo_2270 PF02203 Tar ligand binding domain homologue Tharo_2270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tharo_2270 PF00672 HAMP domain Tharo_2271 PF01584 CheW-like domain Tharo_2271 PF01627 Hpt domain Tharo_2271 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_2271 PF09078 CheY binding Tharo_2271 PF02895 Signal transducing histidine kinase, homodimeric domain Tharo_2273 PF00072 Response regulator receiver domain Tharo_2274 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tharo_2275 PF08446 PAS fold Tharo_2275 PF00512 His Kinase A (phospho-acceptor) domain Tharo_2275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_2275 PF00360 Phytochrome region Tharo_2275 PF01590 GAF domain Tharo_2276 PF07730 Histidine kinase Tharo_2276 PF05231 MASE1 Tharo_2276 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_2277 PF00196 Bacterial regulatory proteins, luxR family Tharo_2277 PF00072 Response regulator receiver domain Tharo_2278 PF03707 Bacterial signalling protein N terminal repeat Tharo_2278 PF00990 Diguanylate cyclase, GGDEF domain Tharo_2278 PF13188 PAS domain Tharo_2278 PF00563 EAL domain Tharo_2279 PF01261 Xylose isomerase-like TIM barrel Tharo_2280 PF00719 Inorganic pyrophosphatase Tharo_2282 PF00403 Heavy-metal-associated domain Tharo_2283 PF00376 MerR family regulatory protein Tharo_2283 PF09278 MerR, DNA binding Tharo_2286 PF06969 HemN C-terminal domain Tharo_2286 PF04055 Radical SAM superfamily Tharo_2287 PF00027 Cyclic nucleotide-binding domain Tharo_2287 PF13545 Crp-like helix-turn-helix domain Tharo_2288 PF04247 Invasion gene expression up-regulator, SirB Tharo_2289 PF13545 Crp-like helix-turn-helix domain Tharo_2289 PF00027 Cyclic nucleotide-binding domain Tharo_2290 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Tharo_2290 PF00753 Metallo-beta-lactamase superfamily Tharo_2290 PF10996 Beta-Casp domain Tharo_2294 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Tharo_2294 PF12801 4Fe-4S binding domain Tharo_2294 PF13746 4Fe-4S dicluster domain Tharo_2295 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Tharo_2295 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Tharo_2298 PF00115 Cytochrome C and Quinol oxidase polypeptide I Tharo_2300 PF00403 Heavy-metal-associated domain Tharo_2302 PF01925 Sulfite exporter TauE/SafE Tharo_2304 PF04172 LrgB-like family Tharo_2306 PF03144 Elongation factor Tu domain 2 Tharo_2306 PF03764 Elongation factor G, domain IV Tharo_2306 PF00009 Elongation factor Tu GTP binding domain Tharo_2306 PF14492 Elongation Factor G, domain II Tharo_2306 PF00679 Elongation factor G C-terminus Tharo_2309 PF00474 Sodium:solute symporter family Tharo_2311 PF03971 Monomeric isocitrate dehydrogenase Tharo_2312 PF00293 NUDIX domain Tharo_2313 PF00692 dUTPase Tharo_2314 PF04127 DNA / pantothenate metabolism flavoprotein Tharo_2314 PF02441 Flavoprotein Tharo_2315 PF04002 RadC-like JAB domain Tharo_2316 PF00830 Ribosomal L28 family Tharo_2317 PF00471 Ribosomal protein L33 Tharo_2318 PF00313 'Cold-shock' DNA-binding domain Tharo_2319 PF02617 ATP-dependent Clp protease adaptor protein ClpS Tharo_2320 PF17871 AAA lid domain Tharo_2320 PF00004 ATPase family associated with various cellular activities (AAA) Tharo_2320 PF07724 AAA domain (Cdc48 subfamily) Tharo_2320 PF02861 Clp amino terminal domain, pathogenicity island component Tharo_2320 PF10431 C-terminal, D2-small domain, of ClpB protein Tharo_2321 PF03737 Aldolase/RraA Tharo_2322 PF00463 Isocitrate lyase family Tharo_2324 PF00072 Response regulator receiver domain Tharo_2324 PF00486 Transcriptional regulatory protein, C terminal Tharo_2325 PF00672 HAMP domain Tharo_2325 PF16527 Two-component sensor protein CpxA, periplasmic domain Tharo_2325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_2325 PF00512 His Kinase A (phospho-acceptor) domain Tharo_2328 PF00581 Rhodanese-like domain Tharo_2329 PF01177 Asp/Glu/Hydantoin racemase Tharo_2330 PF00579 tRNA synthetases class I (W and Y) Tharo_2330 PF01479 S4 domain Tharo_2331 PF01551 Peptidase family M23 Tharo_2331 PF01476 LysM domain Tharo_2331 PF08525 Opacity-associated protein A N-terminal motif Tharo_2332 PF01521 Iron-sulphur cluster biosynthesis Tharo_2333 PF02774 Semialdehyde dehydrogenase, dimerisation domain Tharo_2333 PF01118 Semialdehyde dehydrogenase, NAD binding domain Tharo_2334 PF00380 Ribosomal protein S9/S16 Tharo_2335 PF00572 Ribosomal protein L13 Tharo_2336 PF02566 OsmC-like protein Tharo_2337 PF03232 Ubiquinone biosynthesis protein COQ7 Tharo_2340 PF02754 Cysteine-rich domain Tharo_2340 PF13183 4Fe-4S dicluster domain Tharo_2341 PF02915 Rubrerythrin Tharo_2342 PF00293 NUDIX domain Tharo_2343 PF04073 Aminoacyl-tRNA editing domain Tharo_2343 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tharo_2343 PF03129 Anticodon binding domain Tharo_2344 PF01464 Transglycosylase SLT domain Tharo_2344 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Tharo_2346 PF00158 Sigma-54 interaction domain Tharo_2346 PF00072 Response regulator receiver domain Tharo_2348 PF01523 Putative modulator of DNA gyrase Tharo_2349 PF00795 Carbon-nitrogen hydrolase Tharo_2351 PF03710 Glutamate-ammonia ligase adenylyltransferase Tharo_2351 PF08335 GlnD PII-uridylyltransferase Tharo_2358 PF00293 NUDIX domain Tharo_2359 PF01063 Amino-transferase class IV Tharo_2361 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Tharo_2362 PF00483 Nucleotidyl transferase Tharo_2363 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tharo_2363 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tharo_2363 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tharo_2363 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tharo_2365 PF02272 DHHA1 domain Tharo_2365 PF01411 tRNA synthetases class II (A) Tharo_2365 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Tharo_2368 PF01923 Cobalamin adenosyltransferase Tharo_2369 PF11799 impB/mucB/samB family C-terminal domain Tharo_2369 PF00817 impB/mucB/samB family Tharo_2370 PF00793 DAHP synthetase I family Tharo_2371 PF00174 Oxidoreductase molybdopterin binding domain Tharo_2372 PF01794 Ferric reductase like transmembrane component Tharo_2373 PF05175 Methyltransferase small domain Tharo_2374 PF00994 Probable molybdopterin binding domain Tharo_2375 PF04751 Protein of unknown function (DUF615) Tharo_2376 PF01523 Putative modulator of DNA gyrase Tharo_2377 PF03480 Bacterial extracellular solute-binding protein, family 7 Tharo_2378 PF00300 Histidine phosphatase superfamily (branch 1) Tharo_2379 PF03480 Bacterial extracellular solute-binding protein, family 7 Tharo_2381 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Tharo_2382 PF00464 Serine hydroxymethyltransferase Tharo_2383 PF03477 ATP cone domain Tharo_2384 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Tharo_2384 PF01872 RibD C-terminal domain Tharo_2385 PF00899 ThiF family Tharo_2387 PF03572 Peptidase family S41 Tharo_2387 PF13180 PDZ domain Tharo_2388 PF01551 Peptidase family M23 Tharo_2390 PF00581 Rhodanese-like domain Tharo_2391 PF00462 Glutaredoxin Tharo_2392 PF02556 Preprotein translocase subunit SecB Tharo_2394 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Tharo_2394 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Tharo_2395 PF00588 SpoU rRNA Methylase family Tharo_2396 PF00156 Phosphoribosyl transferase domain Tharo_2397 PF04055 Radical SAM superfamily Tharo_2397 PF06968 Biotin and Thiamin Synthesis associated domain Tharo_2398 PF08241 Methyltransferase domain Tharo_2400 PF00490 Delta-aminolevulinic acid dehydratase Tharo_2401 PF01926 50S ribosome-binding GTPase Tharo_2402 PF00034 Cytochrome c Tharo_2403 PF00994 Probable molybdopterin binding domain Tharo_2403 PF03453 MoeA N-terminal region (domain I and II) Tharo_2403 PF03454 MoeA C-terminal region (domain IV) Tharo_2404 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Tharo_2405 PF01895 PhoU domain Tharo_2406 PF04362 Bacterial Fe(2+) trafficking Tharo_2407 PF00696 Amino acid kinase family Tharo_2407 PF00583 Acetyltransferase (GNAT) family Tharo_2408 PF03976 Polyphosphate kinase 2 (PPK2) Tharo_2409 PF04452 RNA methyltransferase Tharo_2410 PF00459 Inositol monophosphatase family Tharo_2411 PF00485 Phosphoribulokinase / Uridine kinase family Tharo_2413 PF03239 Iron permease FTR1 family Tharo_2416 PF10634 Fe2+ transport protein Tharo_2417 PF00512 His Kinase A (phospho-acceptor) domain Tharo_2417 PF00672 HAMP domain Tharo_2417 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_2418 PF00486 Transcriptional regulatory protein, C terminal Tharo_2418 PF00072 Response regulator receiver domain Tharo_2420 PF00127 Copper binding proteins, plastocyanin/azurin family Tharo_2423 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Tharo_2423 PF00529 HlyD membrane-fusion protein of T1SS Tharo_2424 PF00873 AcrB/AcrD/AcrF family Tharo_2425 PF04945 YHS domain Tharo_2426 PF02583 Metal-sensitive transcriptional repressor Tharo_2428 PF02779 Transketolase, pyrimidine binding domain Tharo_2428 PF02780 Transketolase, C-terminal domain Tharo_2428 PF00456 Transketolase, thiamine diphosphate binding domain Tharo_2429 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Tharo_2429 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Tharo_2430 PF00162 Phosphoglycerate kinase Tharo_2431 PF00224 Pyruvate kinase, barrel domain Tharo_2431 PF02887 Pyruvate kinase, alpha/beta domain Tharo_2432 PF01116 Fructose-bisphosphate aldolase class-II Tharo_2433 PF01568 Molydopterin dinucleotide binding domain Tharo_2433 PF00384 Molybdopterin oxidoreductase Tharo_2435 PF17946 RecC C-terminal domain Tharo_2436 PF00580 UvrD/REP helicase N-terminal domain Tharo_2436 PF12705 PD-(D/E)XK nuclease superfamily Tharo_2436 PF13361 UvrD-like helicase C-terminal domain Tharo_2437 PF13538 UvrD-like helicase C-terminal domain Tharo_2438 PF01259 SAICAR synthetase Tharo_2441 PF01432 Peptidase family M3 Tharo_2442 PF00990 Diguanylate cyclase, GGDEF domain Tharo_2442 PF00563 EAL domain Tharo_2442 PF03707 Bacterial signalling protein N terminal repeat Tharo_2443 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tharo_2447 PF01494 FAD binding domain Tharo_2448 PF00557 Metallopeptidase family M24 Tharo_2448 PF05195 Aminopeptidase P, N-terminal domain Tharo_2449 PF00483 Nucleotidyl transferase Tharo_2450 PF01636 Phosphotransferase enzyme family Tharo_2451 PF03968 OstA-like protein Tharo_2451 PF04453 LPS transport system D Tharo_2452 PF00639 PPIC-type PPIASE domain Tharo_2452 PF09312 SurA N-terminal domain Tharo_2453 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Tharo_2454 PF00398 Ribosomal RNA adenine dimethylase Tharo_2455 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Tharo_2455 PF07733 Bacterial DNA polymerase III alpha NTPase domain Tharo_2455 PF01336 OB-fold nucleic acid binding domain Tharo_2455 PF02811 PHP domain Tharo_2455 PF14579 Helix-hairpin-helix motif Tharo_2456 PF08240 Alcohol dehydrogenase GroES-like domain Tharo_2456 PF00107 Zinc-binding dehydrogenase Tharo_2457 PF02253 Phospholipase A1 Tharo_2458 PF03949 Malic enzyme, NAD binding domain Tharo_2458 PF01515 Phosphate acetyl/butaryl transferase Tharo_2458 PF00390 Malic enzyme, N-terminal domain Tharo_2459 PF00069 Protein kinase domain Tharo_2464 PF03412 Peptidase C39 family Tharo_2464 PF00005 ABC transporter Tharo_2464 PF00664 ABC transporter transmembrane region Tharo_2465 PF00196 Bacterial regulatory proteins, luxR family Tharo_2466 PF02321 Outer membrane efflux protein Tharo_2467 PF13614 AAA domain Tharo_2469 PF13361 UvrD-like helicase C-terminal domain Tharo_2469 PF00580 UvrD/REP helicase N-terminal domain Tharo_2472 PF08264 Anticodon-binding domain of tRNA Tharo_2472 PF00133 tRNA synthetases class I (I, L, M and V) Tharo_2472 PF13603 Leucyl-tRNA synthetase, Domain 2 Tharo_2472 PF09334 tRNA synthetases class I (M) Tharo_2473 PF04390 Lipopolysaccharide-assembly Tharo_2474 PF14840 Processivity clamp loader gamma complex DNA pol III C-term Tharo_2474 PF06144 DNA polymerase III, delta subunit Tharo_2475 PF00171 Aldehyde dehydrogenase family Tharo_2477 PF00589 Phage integrase family Tharo_2477 PF02899 Phage integrase, N-terminal SAM-like domain Tharo_2478 PF04073 Aminoacyl-tRNA editing domain Tharo_2481 PF02660 Glycerol-3-phosphate acyltransferase Tharo_2482 PF00814 Glycoprotease family Tharo_2483 PF01165 Ribosomal protein S21 Tharo_2484 PF08275 DNA primase catalytic core, N-terminal domain Tharo_2484 PF08278 DNA primase DnaG DnaB-binding Tharo_2484 PF01807 CHC2 zinc finger Tharo_2484 PF10410 DnaB-helicase binding domain of primase Tharo_2485 PF04539 Sigma-70 region 3 Tharo_2485 PF04545 Sigma-70, region 4 Tharo_2485 PF03979 Sigma-70 factor, region 1.1 Tharo_2485 PF00140 Sigma-70 factor, region 1.2 Tharo_2485 PF04546 Sigma-70, non-essential region Tharo_2485 PF04542 Sigma-70 region 2 Tharo_2487 PF02661 Fic/DOC family Tharo_2487 PF13784 Fic/DOC family N-terminal Tharo_2489 PF00586 AIR synthase related protein, N-terminal domain Tharo_2489 PF02769 AIR synthase related protein, C-terminal domain Tharo_2490 PF01594 AI-2E family transporter Tharo_2491 PF00308 Bacterial dnaA protein Tharo_2493 PF01743 Poly A polymerase head domain Tharo_2493 PF12626 Polymerase A arginine-rich C-terminus Tharo_2493 PF12627 Probable RNA and SrmB- binding site of polymerase A Tharo_2494 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Tharo_2496 PF02548 Ketopantoate hydroxymethyltransferase Tharo_2497 PF02569 Pantoate-beta-alanine ligase Tharo_2498 PF00478 IMP dehydrogenase / GMP reductase domain Tharo_2498 PF00571 CBS domain Tharo_2499 PF01433 Peptidase family M1 domain Tharo_2499 PF11940 Domain of unknown function (DUF3458) Ig-like fold Tharo_2499 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Tharo_2501 PF00999 Sodium/hydrogen exchanger family Tharo_2502 PF00689 Cation transporting ATPase, C-terminus Tharo_2502 PF00690 Cation transporter/ATPase, N-terminus Tharo_2504 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tharo_2504 PF00205 Thiamine pyrophosphate enzyme, central domain Tharo_2504 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tharo_2505 PF10369 Small subunit of acetolactate synthase Tharo_2506 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Tharo_2506 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Tharo_2507 PF01066 CDP-alcohol phosphatidyltransferase Tharo_2508 PF08502 LeuA allosteric (dimerisation) domain Tharo_2508 PF00682 HMGL-like Tharo_2510 PF03358 NADPH-dependent FMN reductase Tharo_2511 PF00886 Ribosomal protein S16 Tharo_2512 PF01782 RimM N-terminal domain Tharo_2512 PF05239 PRC-barrel domain Tharo_2513 PF01746 tRNA (Guanine-1)-methyltransferase Tharo_2514 PF01245 Ribosomal protein L19 Tharo_2515 PF03739 Lipopolysaccharide export system permease LptF/LptG Tharo_2516 PF03739 Lipopolysaccharide export system permease LptF/LptG Tharo_2517 PF00883 Cytosol aminopeptidase family, catalytic domain Tharo_2517 PF02789 Cytosol aminopeptidase family, N-terminal domain Tharo_2520 PF08264 Anticodon-binding domain of tRNA Tharo_2520 PF00133 tRNA synthetases class I (I, L, M and V) Tharo_2520 PF10458 Valyl tRNA synthetase tRNA binding arm Tharo_2521 PF01206 Sulfurtransferase TusA Tharo_2522 PF01435 Peptidase family M48 Tharo_2522 PF13181 Tetratricopeptide repeat Tharo_2523 PF01967 MoaC family Tharo_2524 PF03707 Bacterial signalling protein N terminal repeat Tharo_2524 PF00990 Diguanylate cyclase, GGDEF domain Tharo_2524 PF00563 EAL domain Tharo_2525 PF00072 Response regulator receiver domain Tharo_2525 PF00990 Diguanylate cyclase, GGDEF domain Tharo_2526 PF00512 His Kinase A (phospho-acceptor) domain Tharo_2526 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_2527 PF00005 ABC transporter Tharo_2528 PF00528 Binding-protein-dependent transport system inner membrane component Tharo_2529 PF00072 Response regulator receiver domain Tharo_2532 PF00672 HAMP domain Tharo_2532 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tharo_2532 PF16591 Helical bimodular sensor domain Tharo_2533 PF07194 P2 response regulator binding domain Tharo_2533 PF01627 Hpt domain Tharo_2533 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_2533 PF02895 Signal transducing histidine kinase, homodimeric domain Tharo_2533 PF01584 CheW-like domain Tharo_2536 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Tharo_2536 PF04324 BFD-like [2Fe-2S] binding domain Tharo_2536 PF18267 Rubredoxin NAD+ reductase C-terminal domain Tharo_2536 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tharo_2537 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Tharo_2537 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Tharo_2539 PF02441 Flavoprotein Tharo_2540 PF07729 FCD domain Tharo_2540 PF00392 Bacterial regulatory proteins, gntR family Tharo_2541 PF00108 Thiolase, N-terminal domain Tharo_2541 PF02803 Thiolase, C-terminal domain Tharo_2542 PF00501 AMP-binding enzyme Tharo_2542 PF13193 AMP-binding enzyme C-terminal domain Tharo_2543 PF05378 Hydantoinase/oxoprolinase N-terminal region Tharo_2543 PF01968 Hydantoinase/oxoprolinase Tharo_2544 PF02538 Hydantoinase B/oxoprolinase Tharo_2545 PF02770 Acyl-CoA dehydrogenase, middle domain Tharo_2545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tharo_2545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tharo_2546 PF02310 B12 binding domain Tharo_2546 PF01642 Methylmalonyl-CoA mutase Tharo_2549 PF00111 2Fe-2S iron-sulfur cluster binding domain Tharo_2549 PF01799 [2Fe-2S] binding domain Tharo_2550 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Tharo_2550 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Tharo_2551 PF02515 CoA-transferase family III Tharo_2554 PF14602 Hexapeptide repeat of succinyl-transferase Tharo_2554 PF12804 MobA-like NTP transferase domain Tharo_2554 PF00132 Bacterial transferase hexapeptide (six repeats) Tharo_2555 PF13478 XdhC Rossmann domain Tharo_2555 PF02625 XdhC and CoxI family Tharo_2558 PF01494 FAD binding domain Tharo_2562 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tharo_2562 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Tharo_2563 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Tharo_2563 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Tharo_2565 PF01292 Prokaryotic cytochrome b561 Tharo_2567 PF04264 YceI-like domain Tharo_2568 PF13409 Glutathione S-transferase, N-terminal domain Tharo_2571 PF16363 GDP-mannose 4,6 dehydratase Tharo_2573 PF00483 Nucleotidyl transferase Tharo_2574 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Tharo_2575 PF00535 Glycosyl transferase family 2 Tharo_2579 PF00348 Polyprenyl synthetase Tharo_2580 PF13416 Bacterial extracellular solute-binding protein Tharo_2581 PF00248 Aldo/keto reductase family Tharo_2582 PF01728 FtsJ-like methyltransferase Tharo_2582 PF18125 RlmM ferredoxin-like domain Tharo_2583 PF00270 DEAD/DEAH box helicase Tharo_2583 PF00271 Helicase conserved C-terminal domain Tharo_2584 PF02233 NAD(P) transhydrogenase beta subunit Tharo_2585 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Tharo_2586 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Tharo_2586 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Tharo_2588 PF13183 4Fe-4S dicluster domain Tharo_2588 PF02754 Cysteine-rich domain Tharo_2589 PF01565 FAD binding domain Tharo_2591 PF01565 FAD binding domain Tharo_2591 PF02913 FAD linked oxidases, C-terminal domain Tharo_2592 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_2592 PF03466 LysR substrate binding domain Tharo_2593 PF00829 Ribosomal prokaryotic L21 protein Tharo_2594 PF01016 Ribosomal L27 protein Tharo_2595 PF01018 GTP1/OBG Tharo_2595 PF01926 50S ribosome-binding GTPase Tharo_2596 PF00696 Amino acid kinase family Tharo_2596 PF01472 PUA domain Tharo_2597 PF16177 Acetyl-coenzyme A synthetase N-terminus Tharo_2597 PF13193 AMP-binding enzyme C-terminal domain Tharo_2597 PF00501 AMP-binding enzyme Tharo_2598 PF00107 Zinc-binding dehydrogenase Tharo_2602 PF00589 Phage integrase family Tharo_2602 PF13356 Arm DNA-binding domain Tharo_2604 PF01381 Helix-turn-helix Tharo_2606 PF00472 RF-1 domain Tharo_2608 PF09905 DNA-binding protein VF530 Tharo_2610 PF07728 AAA domain (dynein-related subfamily) Tharo_2610 PF12102 Domain of unknown function (DUF3578) Tharo_2611 PF00570 HRDC domain Tharo_2611 PF09382 RQC domain Tharo_2611 PF16124 RecQ zinc-binding Tharo_2611 PF00270 DEAD/DEAH box helicase Tharo_2611 PF00271 Helicase conserved C-terminal domain Tharo_2620 PF01300 Telomere recombination Tharo_2620 PF03481 Putative GTP-binding controlling metal-binding Tharo_2621 PF02222 ATP-grasp domain Tharo_2621 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Tharo_2622 PF00731 AIR carboxylase Tharo_2623 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Tharo_2623 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Tharo_2624 PF03471 Transporter associated domain Tharo_2624 PF02080 TrkA-C domain Tharo_2624 PF00999 Sodium/hydrogen exchanger family Tharo_2625 PF00072 Response regulator receiver domain Tharo_2625 PF00196 Bacterial regulatory proteins, luxR family Tharo_2626 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_2626 PF00512 His Kinase A (phospho-acceptor) domain Tharo_2626 PF00989 PAS fold Tharo_2628 PF17831 Pyruvate dehydrogenase E1 component middle domain Tharo_2628 PF00456 Transketolase, thiamine diphosphate binding domain Tharo_2629 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Tharo_2629 PF02817 e3 binding domain Tharo_2629 PF00364 Biotin-requiring enzyme Tharo_2630 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tharo_2630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tharo_2634 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal Tharo_2634 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Tharo_2634 PF02769 AIR synthase related protein, C-terminal domain Tharo_2647 PF18818 Metallopeptidase superfamily domain Tharo_2647 PF13362 Toprim domain Tharo_2647 PF08401 Domain of unknown function (DUF1738) Tharo_2655 PF00665 Integrase core domain Tharo_2655 PF13333 Integrase core domain Tharo_2655 PF13276 HTH-like domain Tharo_2657 PF00589 Phage integrase family Tharo_2657 PF13356 Arm DNA-binding domain Tharo_2659 PF00216 Bacterial DNA-binding protein Tharo_2660 PF02190 ATP-dependent protease La (LON) substrate-binding domain Tharo_2660 PF00004 ATPase family associated with various cellular activities (AAA) Tharo_2660 PF05362 Lon protease (S16) C-terminal proteolytic domain Tharo_2661 PF07724 AAA domain (Cdc48 subfamily) Tharo_2661 PF10431 C-terminal, D2-small domain, of ClpB protein Tharo_2661 PF06689 ClpX C4-type zinc finger Tharo_2662 PF00574 Clp protease Tharo_2663 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Tharo_2663 PF05697 Bacterial trigger factor protein (TF) Tharo_2663 PF05698 Bacterial trigger factor protein (TF) C-terminus Tharo_2664 PF08298 PrkA AAA domain Tharo_2664 PF06798 PrkA serine protein kinase C-terminal domain Tharo_2665 PF04285 Protein of unknown function (DUF444) Tharo_2666 PF04293 SpoVR like protein Tharo_2667 PF03853 YjeF-related protein N-terminus Tharo_2667 PF01256 Carbohydrate kinase Tharo_2669 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Tharo_2669 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Tharo_2670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Tharo_2670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Tharo_2671 PF00132 Bacterial transferase hexapeptide (six repeats) Tharo_2673 PF13007 Transposase C of IS166 homeodomain Tharo_2673 PF13817 IS66 C-terminal element Tharo_2673 PF03050 Transposase IS66 family Tharo_2673 PF13005 zinc-finger binding domain of transposase IS66 Tharo_2675 PF00155 Aminotransferase class I and II Tharo_2676 PF01008 Initiation factor 2 subunit family Tharo_2679 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system Tharo_2681 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Tharo_2681 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Tharo_2682 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Tharo_2682 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Tharo_2683 PF02885 Glycosyl transferase family, helical bundle domain Tharo_2684 PF05726 Pirin C-terminal cupin domain Tharo_2684 PF02678 Pirin Tharo_2685 PF02525 Flavodoxin-like fold Tharo_2686 PF03466 LysR substrate binding domain Tharo_2686 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_2687 PF02600 Disulfide bond formation protein DsbB Tharo_2689 PF00873 AcrB/AcrD/AcrF family Tharo_2692 PF00899 ThiF family Tharo_2694 PF00436 Single-strand binding protein family Tharo_2695 PF07690 Major Facilitator Superfamily Tharo_2696 PF17760 UvrA interaction domain Tharo_2696 PF17755 UvrA DNA-binding domain Tharo_2697 PF16363 GDP-mannose 4,6 dehydratase Tharo_2698 PF01196 Ribosomal protein L17 Tharo_2699 PF01000 RNA polymerase Rpb3/RpoA insert domain Tharo_2699 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Tharo_2699 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Tharo_2700 PF00163 Ribosomal protein S4/S9 N-terminal domain Tharo_2700 PF01479 S4 domain Tharo_2701 PF00411 Ribosomal protein S11 Tharo_2702 PF00416 Ribosomal protein S13/S18 Tharo_2703 PF01176 Translation initiation factor 1A / IF-1 Tharo_2704 PF00344 SecY translocase Tharo_2705 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Tharo_2706 PF00327 Ribosomal protein L30p/L7e Tharo_2707 PF00333 Ribosomal protein S5, N-terminal domain Tharo_2707 PF03719 Ribosomal protein S5, C-terminal domain Tharo_2708 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Tharo_2709 PF00347 Ribosomal protein L6 Tharo_2710 PF00410 Ribosomal protein S8 Tharo_2711 PF00253 Ribosomal protein S14p/S29e Tharo_2712 PF00673 ribosomal L5P family C-terminus Tharo_2712 PF00281 Ribosomal protein L5 Tharo_2713 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Tharo_2714 PF00238 Ribosomal protein L14p/L23e Tharo_2715 PF00366 Ribosomal protein S17 Tharo_2716 PF00831 Ribosomal L29 protein Tharo_2717 PF00252 Ribosomal protein L16p/L10e Tharo_2718 PF00189 Ribosomal protein S3, C-terminal domain Tharo_2718 PF07650 KH domain Tharo_2719 PF00237 Ribosomal protein L22p/L17e Tharo_2720 PF00203 Ribosomal protein S19 Tharo_2721 PF00181 Ribosomal Proteins L2, RNA binding domain Tharo_2721 PF03947 Ribosomal Proteins L2, C-terminal domain Tharo_2722 PF00276 Ribosomal protein L23 Tharo_2723 PF00573 Ribosomal protein L4/L1 family Tharo_2724 PF00297 Ribosomal protein L3 Tharo_2725 PF00338 Ribosomal protein S10p/S20e Tharo_2726 PF03143 Elongation factor Tu C-terminal domain Tharo_2726 PF00009 Elongation factor Tu GTP binding domain Tharo_2726 PF03144 Elongation factor Tu domain 2 Tharo_2727 PF03144 Elongation factor Tu domain 2 Tharo_2727 PF00009 Elongation factor Tu GTP binding domain Tharo_2727 PF03764 Elongation factor G, domain IV Tharo_2727 PF14492 Elongation Factor G, domain II Tharo_2727 PF00679 Elongation factor G C-terminus Tharo_2728 PF00177 Ribosomal protein S7p/S5e Tharo_2729 PF00164 Ribosomal protein S12/S23 Tharo_2730 PF04998 RNA polymerase Rpb1, domain 5 Tharo_2730 PF04997 RNA polymerase Rpb1, domain 1 Tharo_2730 PF05000 RNA polymerase Rpb1, domain 4 Tharo_2730 PF00623 RNA polymerase Rpb1, domain 2 Tharo_2730 PF04983 RNA polymerase Rpb1, domain 3 Tharo_2731 PF00562 RNA polymerase Rpb2, domain 6 Tharo_2731 PF04561 RNA polymerase Rpb2, domain 2 Tharo_2731 PF04565 RNA polymerase Rpb2, domain 3 Tharo_2731 PF04563 RNA polymerase beta subunit Tharo_2731 PF10385 RNA polymerase beta subunit external 1 domain Tharo_2731 PF04560 RNA polymerase Rpb2, domain 7 Tharo_2732 PF16320 Ribosomal protein L7/L12 dimerisation domain Tharo_2732 PF00542 Ribosomal protein L7/L12 C-terminal domain Tharo_2733 PF00466 Ribosomal protein L10 Tharo_2734 PF00687 Ribosomal protein L1p/L10e family Tharo_2735 PF03946 Ribosomal protein L11, N-terminal domain Tharo_2735 PF00298 Ribosomal protein L11, RNA binding domain Tharo_2736 PF00467 KOW motif Tharo_2736 PF02357 Transcription termination factor nusG Tharo_2737 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Tharo_2739 PF03144 Elongation factor Tu domain 2 Tharo_2739 PF03143 Elongation factor Tu C-terminal domain Tharo_2739 PF00009 Elongation factor Tu GTP binding domain Tharo_2743 PF01565 FAD binding domain Tharo_2743 PF02913 FAD linked oxidases, C-terminal domain Tharo_2744 PF00196 Bacterial regulatory proteins, luxR family Tharo_2744 PF00072 Response regulator receiver domain Tharo_2746 PF00512 His Kinase A (phospho-acceptor) domain Tharo_2746 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_2746 PF01627 Hpt domain Tharo_2746 PF00072 Response regulator receiver domain Tharo_2746 PF00672 HAMP domain Tharo_2746 PF17149 Periplasmic sensor domain found in signal transduction proteins Tharo_2751 PF00437 Type II/IV secretion system protein Tharo_2752 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tharo_2757 PF04972 BON domain Tharo_2757 PF00263 Bacterial type II and III secretion system protein Tharo_2757 PF13629 Pilus formation protein N terminal region Tharo_2763 PF00072 Response regulator receiver domain Tharo_2763 PF01339 CheB methylesterase Tharo_2766 PF00196 Bacterial regulatory proteins, luxR family Tharo_2766 PF00072 Response regulator receiver domain Tharo_2769 PF13677 Membrane MotB of proton-channel complex MotA/MotB Tharo_2769 PF00691 OmpA family Tharo_2771 PF01642 Methylmalonyl-CoA mutase Tharo_2771 PF02310 B12 binding domain Tharo_2773 PF02830 V4R domain Tharo_2773 PF06505 Activator of aromatic catabolism Tharo_2773 PF02954 Bacterial regulatory protein, Fis family Tharo_2773 PF00158 Sigma-54 interaction domain Tharo_2774 PF00550 Phosphopantetheine attachment site Tharo_2774 PF00975 Thioesterase domain Tharo_2774 PF00391 PEP-utilising enzyme, mobile domain Tharo_2774 PF00501 AMP-binding enzyme Tharo_2774 PF00668 Condensation domain Tharo_2774 PF08241 Methyltransferase domain Tharo_2774 PF13193 AMP-binding enzyme C-terminal domain Tharo_2775 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Tharo_2775 PF00391 PEP-utilising enzyme, mobile domain Tharo_2775 PF02896 PEP-utilising enzyme, TIM barrel domain Tharo_2776 PF00571 CBS domain Tharo_2777 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tharo_2779 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tharo_2781 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tharo_2782 PF02441 Flavoprotein Tharo_2784 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain Tharo_2784 PF00293 NUDIX domain Tharo_2784 PF09297 NADH pyrophosphatase zinc ribbon domain Tharo_2786 PF00501 AMP-binding enzyme Tharo_2786 PF14535 AMP-binding enzyme C-terminal domain Tharo_2789 PF04228 Putative neutral zinc metallopeptidase Tharo_2792 PF02785 Biotin carboxylase C-terminal domain Tharo_2792 PF00289 Biotin carboxylase, N-terminal domain Tharo_2792 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tharo_2793 PF01039 Carboxyl transferase domain Tharo_2795 PF02310 B12 binding domain Tharo_2795 PF01642 Methylmalonyl-CoA mutase Tharo_2796 PF00392 Bacterial regulatory proteins, gntR family Tharo_2796 PF07729 FCD domain Tharo_2797 PF00571 CBS domain Tharo_2797 PF01595 Cyclin M transmembrane N-terminal domain Tharo_2797 PF03471 Transporter associated domain Tharo_2798 PF07238 PilZ domain Tharo_2799 PF02321 Outer membrane efflux protein Tharo_2801 PF08448 PAS fold Tharo_2801 PF00990 Diguanylate cyclase, GGDEF domain Tharo_2804 PF00196 Bacterial regulatory proteins, luxR family Tharo_2804 PF00072 Response regulator receiver domain Tharo_2805 PF00529 HlyD membrane-fusion protein of T1SS Tharo_2805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Tharo_2806 PF03412 Peptidase C39 family Tharo_2806 PF00005 ABC transporter Tharo_2806 PF00664 ABC transporter transmembrane region Tharo_2809 PF00005 ABC transporter Tharo_2809 PF02687 FtsX-like permease family Tharo_2809 PF12704 MacB-like periplasmic core domain Tharo_2810 PF01475 Ferric uptake regulator family Tharo_2812 PF00005 ABC transporter Tharo_2813 PF00950 ABC 3 transport family Tharo_2814 PF01297 Zinc-uptake complex component A periplasmic Tharo_2815 PF01925 Sulfite exporter TauE/SafE Tharo_2818 PF13493 Domain of unknown function (DUF4118) Tharo_2818 PF02702 Osmosensitive K+ channel His kinase sensor domain Tharo_2818 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_2818 PF00512 His Kinase A (phospho-acceptor) domain Tharo_2818 PF13492 GAF domain Tharo_2819 PF00072 Response regulator receiver domain Tharo_2819 PF00486 Transcriptional regulatory protein, C terminal Tharo_2820 PF00072 Response regulator receiver domain Tharo_2820 PF00196 Bacterial regulatory proteins, luxR family Tharo_2822 PF06965 Na+/H+ antiporter 1 Tharo_2822 PF13462 Thioredoxin Tharo_2824 PF02386 Cation transport protein Tharo_2827 PF00920 Dehydratase family Tharo_2828 PF04337 Protein of unknown function, DUF480 Tharo_2829 PF01790 Prolipoprotein diacylglyceryl transferase Tharo_2831 PF00563 EAL domain Tharo_2831 PF00990 Diguanylate cyclase, GGDEF domain Tharo_2831 PF03707 Bacterial signalling protein N terminal repeat Tharo_2836 PF00210 Ferritin-like domain Tharo_2838 PF01618 MotA/TolQ/ExbB proton channel family Tharo_2839 PF02472 Biopolymer transport protein ExbD/TolR Tharo_2840 PF01475 Ferric uptake regulator family Tharo_2842 PF12704 MacB-like periplasmic core domain Tharo_2842 PF02687 FtsX-like permease family Tharo_2842 PF00005 ABC transporter Tharo_2843 PF02321 Outer membrane efflux protein Tharo_2844 PF00593 TonB dependent receptor Tharo_2844 PF07660 Secretin and TonB N terminus short domain Tharo_2844 PF07715 TonB-dependent Receptor Plug Domain Tharo_2848 PF00593 TonB dependent receptor Tharo_2848 PF07715 TonB-dependent Receptor Plug Domain Tharo_2853 PF07715 TonB-dependent Receptor Plug Domain Tharo_2853 PF00593 TonB dependent receptor Tharo_2862 PF16200 C-terminal region of band_7 Tharo_2862 PF01145 SPFH domain / Band 7 family Tharo_2864 PF03595 Voltage-dependent anion channel Tharo_2865 PF00990 Diguanylate cyclase, GGDEF domain Tharo_2869 PF00114 Pilin (bacterial filament) Tharo_2869 PF07963 Prokaryotic N-terminal methylation motif Tharo_2872 PF07724 AAA domain (Cdc48 subfamily) Tharo_2872 PF10431 C-terminal, D2-small domain, of ClpB protein Tharo_2872 PF00004 ATPase family associated with various cellular activities (AAA) Tharo_2873 PF00227 Proteasome subunit Tharo_2874 PF03061 Thioesterase superfamily Tharo_2875 PF01618 MotA/TolQ/ExbB proton channel family Tharo_2876 PF02472 Biopolymer transport protein ExbD/TolR Tharo_2878 PF04052 TolB amino-terminal domain Tharo_2878 PF07676 WD40-like Beta Propeller Repeat Tharo_2879 PF00691 OmpA family Tharo_2881 PF04055 Radical SAM superfamily Tharo_2882 PF06508 Queuosine biosynthesis protein QueC Tharo_2896 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB Tharo_2897 PF00589 Phage integrase family Tharo_2897 PF13356 Arm DNA-binding domain Tharo_2898 PF01176 Translation initiation factor 1A / IF-1 Tharo_2899 PF01738 Dienelactone hydrolase family Tharo_2902 PF03668 P-loop ATPase protein family Tharo_2903 PF00072 Response regulator receiver domain Tharo_2903 PF13188 PAS domain Tharo_2903 PF00512 His Kinase A (phospho-acceptor) domain Tharo_2903 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_2903 PF08448 PAS fold Tharo_2904 PF00158 Sigma-54 interaction domain Tharo_2904 PF02954 Bacterial regulatory protein, Fis family Tharo_2904 PF00072 Response regulator receiver domain Tharo_2907 PF01565 FAD binding domain Tharo_2907 PF02913 FAD linked oxidases, C-terminal domain Tharo_2908 PF00171 Aldehyde dehydrogenase family Tharo_2910 PF07044 Protein of unknown function (DUF1329) Tharo_2915 PF02954 Bacterial regulatory protein, Fis family Tharo_2915 PF06505 Activator of aromatic catabolism Tharo_2915 PF02830 V4R domain Tharo_2915 PF00158 Sigma-54 interaction domain Tharo_2916 PF00501 AMP-binding enzyme Tharo_2916 PF13193 AMP-binding enzyme C-terminal domain Tharo_2918 PF00364 Biotin-requiring enzyme Tharo_2919 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tharo_2919 PF00289 Biotin carboxylase, N-terminal domain Tharo_2919 PF02785 Biotin carboxylase C-terminal domain Tharo_2920 PF02436 Conserved carboxylase domain Tharo_2920 PF00682 HMGL-like Tharo_2922 PF02913 FAD linked oxidases, C-terminal domain Tharo_2922 PF01565 FAD binding domain Tharo_2925 PF00108 Thiolase, N-terminal domain Tharo_2925 PF02803 Thiolase, C-terminal domain Tharo_2927 PF08240 Alcohol dehydrogenase GroES-like domain Tharo_2927 PF00107 Zinc-binding dehydrogenase Tharo_2929 PF02913 FAD linked oxidases, C-terminal domain Tharo_2929 PF01565 FAD binding domain Tharo_2931 PF00082 Subtilase family Tharo_2932 PF00664 ABC transporter transmembrane region Tharo_2932 PF00005 ABC transporter Tharo_2933 PF16123 Hydroxyacylglutathione hydrolase C-terminus Tharo_2933 PF00753 Metallo-beta-lactamase superfamily Tharo_2936 PF02515 CoA-transferase family III Tharo_2937 PF00440 Bacterial regulatory proteins, tetR family Tharo_2937 PF16859 Tetracyclin repressor-like, C-terminal domain Tharo_2938 PF02515 CoA-transferase family III Tharo_2939 PF13378 Enolase C-terminal domain-like Tharo_2939 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Tharo_2940 PF00171 Aldehyde dehydrogenase family Tharo_2942 PF03480 Bacterial extracellular solute-binding protein, family 7 Tharo_2943 PF00682 HMGL-like Tharo_2944 PF00364 Biotin-requiring enzyme Tharo_2944 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tharo_2944 PF00289 Biotin carboxylase, N-terminal domain Tharo_2944 PF02785 Biotin carboxylase C-terminal domain Tharo_2945 PF00378 Enoyl-CoA hydratase/isomerase Tharo_2946 PF01039 Carboxyl transferase domain Tharo_2947 PF02803 Thiolase, C-terminal domain Tharo_2947 PF00108 Thiolase, N-terminal domain Tharo_2948 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tharo_2948 PF02770 Acyl-CoA dehydrogenase, middle domain Tharo_2948 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tharo_2950 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus Tharo_2950 PF00561 alpha/beta hydrolase fold Tharo_2954 PF13462 Thioredoxin Tharo_2956 PF05746 DALR anticodon binding domain Tharo_2956 PF00750 tRNA synthetases class I (R) Tharo_2956 PF03485 Arginyl tRNA synthetase N terminal domain Tharo_2957 PF03109 ABC1 family Tharo_2958 PF00202 Aminotransferase class-III Tharo_2963 PF00586 AIR synthase related protein, N-terminal domain Tharo_2963 PF02769 AIR synthase related protein, C-terminal domain Tharo_2964 PF04608 Phosphatidylglycerophosphatase A Tharo_2965 PF02464 Competence-damaged protein Tharo_2966 PF00154 recA bacterial DNA recombination protein Tharo_2967 PF02631 RecX family Tharo_2968 PF00005 ABC transporter Tharo_2968 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tharo_2969 PF00309 Sigma-54 factor, Activator interacting domain (AID) Tharo_2969 PF04963 Sigma-54 factor, core binding domain Tharo_2969 PF04552 Sigma-54, DNA binding domain Tharo_2970 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Tharo_2971 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Tharo_2972 PF07475 HPr Serine kinase C-terminal domain Tharo_2972 PF02603 HPr Serine kinase N terminus Tharo_2973 PF00585 C-terminal regulatory domain of Threonine dehydratase Tharo_2973 PF00291 Pyridoxal-phosphate dependent enzyme Tharo_2974 PF01812 5-formyltetrahydrofolate cyclo-ligase family Tharo_2975 PF01464 Transglycosylase SLT domain Tharo_2975 PF14718 Soluble lytic murein transglycosylase L domain Tharo_2976 PF13460 NAD(P)H-binding Tharo_2976 PF11066 Protein of unknown function (DUF2867) Tharo_2978 PF01743 Poly A polymerase head domain Tharo_2978 PF01966 HD domain Tharo_2978 PF12627 Probable RNA and SrmB- binding site of polymerase A Tharo_2979 PF02798 Glutathione S-transferase, N-terminal domain Tharo_2979 PF00043 Glutathione S-transferase, C-terminal domain Tharo_2980 PF12697 Alpha/beta hydrolase family Tharo_2981 PF00672 HAMP domain Tharo_2981 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tharo_2981 PF02203 Tar ligand binding domain homologue Tharo_2984 PF01171 PP-loop family Tharo_2986 PF09335 SNARE associated Golgi protein Tharo_2988 PF02146 Sir2 family Tharo_2990 PF00156 Phosphoribosyl transferase domain Tharo_2991 PF03372 Endonuclease/Exonuclease/phosphatase family Tharo_2992 PF00990 Diguanylate cyclase, GGDEF domain Tharo_2992 PF07694 5TMR of 5TMR-LYT Tharo_2993 PF00563 EAL domain Tharo_2993 PF00990 Diguanylate cyclase, GGDEF domain Tharo_2993 PF03707 Bacterial signalling protein N terminal repeat Tharo_2996 PF07690 Major Facilitator Superfamily Tharo_2997 PF13193 AMP-binding enzyme C-terminal domain Tharo_2997 PF00501 AMP-binding enzyme Tharo_2999 PF03176 MMPL family Tharo_3001 PF07044 Protein of unknown function (DUF1329) Tharo_3003 PF00034 Cytochrome c Tharo_3004 PF01593 Flavin containing amine oxidoreductase Tharo_3005 PF12833 Helix-turn-helix domain Tharo_3006 PF03480 Bacterial extracellular solute-binding protein, family 7 Tharo_3009 PF01494 FAD binding domain Tharo_3012 PF00990 Diguanylate cyclase, GGDEF domain Tharo_3012 PF00563 EAL domain Tharo_3012 PF03707 Bacterial signalling protein N terminal repeat Tharo_3013 PF00563 EAL domain Tharo_3013 PF00990 Diguanylate cyclase, GGDEF domain Tharo_3013 PF03707 Bacterial signalling protein N terminal repeat Tharo_3014 PF01070 FMN-dependent dehydrogenase Tharo_3015 PF00085 Thioredoxin Tharo_3019 PF09704 CRISPR-associated protein (Cas_Cas5) Tharo_3023 PF01867 CRISPR associated protein Cas1 Tharo_3024 PF09827 CRISPR associated protein Cas2 Tharo_3026 PF13439 Glycosyltransferase Family 4 Tharo_3026 PF00534 Glycosyl transferases group 1 Tharo_3029 PF09345 Domain of unknown function (DUF1987) Tharo_3030 PF00072 Response regulator receiver domain Tharo_3030 PF00990 Diguanylate cyclase, GGDEF domain Tharo_3031 PF00884 Sulfatase Tharo_3032 PF13607 Succinyl-CoA ligase like flavodoxin domain Tharo_3032 PF00583 Acetyltransferase (GNAT) family Tharo_3032 PF13380 CoA binding domain Tharo_3033 PF00378 Enoyl-CoA hydratase/isomerase Tharo_3035 PF17151 Periplasmic sensor domain Tharo_3035 PF00990 Diguanylate cyclase, GGDEF domain Tharo_3036 PF01565 FAD binding domain Tharo_3036 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Tharo_3038 PF00082 Subtilase family Tharo_3040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_3040 PF03466 LysR substrate binding domain Tharo_3045 PF00579 tRNA synthetases class I (W and Y) Tharo_3048 PF00982 Glycosyltransferase family 20 Tharo_3048 PF05116 Sucrose-6F-phosphate phosphohydrolase Tharo_3049 PF05552 Conserved TM helix Tharo_3049 PF00924 Mechanosensitive ion channel Tharo_3050 PF00563 EAL domain Tharo_3050 PF00990 Diguanylate cyclase, GGDEF domain Tharo_3050 PF03707 Bacterial signalling protein N terminal repeat Tharo_3051 PF00072 Response regulator receiver domain Tharo_3051 PF09456 RcsC Alpha-Beta-Loop (ABL) Tharo_3051 PF00512 His Kinase A (phospho-acceptor) domain Tharo_3051 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_3053 PF07075 Protein of unknown function (DUF1343) Tharo_3054 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Tharo_3054 PF14572 Phosphoribosyl synthetase-associated domain Tharo_3055 PF01661 Macro domain Tharo_3056 PF02233 NAD(P) transhydrogenase beta subunit Tharo_3057 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Tharo_3058 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Tharo_3058 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Tharo_3059 PF01012 Electron transfer flavoprotein domain Tharo_3059 PF00766 Electron transfer flavoprotein FAD-binding domain Tharo_3060 PF01012 Electron transfer flavoprotein domain Tharo_3064 PF07044 Protein of unknown function (DUF1329) Tharo_3066 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_3066 PF13188 PAS domain Tharo_3066 PF13426 PAS domain Tharo_3067 PF00072 Response regulator receiver domain Tharo_3067 PF00196 Bacterial regulatory proteins, luxR family Tharo_3068 PF04055 Radical SAM superfamily Tharo_3069 PF08201 BssC/TutF protein Tharo_3070 PF01228 Glycine radical Tharo_3070 PF02901 Pyruvate formate lyase-like Tharo_3071 PF18512 Benzylsuccinate synthase beta subunit Tharo_3072 PF07728 AAA domain (dynein-related subfamily) Tharo_3072 PF08406 CbbQ/NirQ/NorQ C-terminal Tharo_3075 PF07690 Major Facilitator Superfamily Tharo_3079 PF07969 Amidohydrolase family Tharo_3080 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Tharo_3081 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system Tharo_3082 PF01161 Phosphatidylethanolamine-binding protein Tharo_3083 PF00378 Enoyl-CoA hydratase/isomerase Tharo_3084 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tharo_3084 PF02770 Acyl-CoA dehydrogenase, middle domain Tharo_3084 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tharo_3085 PF02515 CoA-transferase family III Tharo_3086 PF02515 CoA-transferase family III Tharo_3089 PF08240 Alcohol dehydrogenase GroES-like domain Tharo_3089 PF16197 Ketoacyl-synthetase C-terminal extension Tharo_3089 PF00109 Beta-ketoacyl synthase, N-terminal domain Tharo_3089 PF02801 Beta-ketoacyl synthase, C-terminal domain Tharo_3089 PF00698 Acyl transferase domain Tharo_3089 PF08659 KR domain Tharo_3089 PF00550 Phosphopantetheine attachment site Tharo_3089 PF00107 Zinc-binding dehydrogenase Tharo_3089 PF14765 Polyketide synthase dehydratase Tharo_3091 PF01062 Bestrophin, RFP-TM, chloride channel Tharo_3092 PF02607 B12 binding domain Tharo_3092 PF02965 Vitamin B12 dependent methionine synthase, activation domain Tharo_3092 PF02310 B12 binding domain Tharo_3092 PF00809 Pterin binding enzyme Tharo_3092 PF02574 Homocysteine S-methyltransferase Tharo_3095 PF13458 Periplasmic binding protein Tharo_3097 PF02653 Branched-chain amino acid transport system / permease component Tharo_3098 PF00005 ABC transporter Tharo_3099 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tharo_3099 PF00005 ABC transporter Tharo_3100 PF07690 Major Facilitator Superfamily Tharo_3101 PF13335 Magnesium chelatase, subunit ChlI C-terminal Tharo_3101 PF01078 Magnesium chelatase, subunit ChlI Tharo_3104 PF00543 Nitrogen regulatory protein P-II Tharo_3105 PF00909 Ammonium Transporter Family Tharo_3110 PF00551 Formyl transferase Tharo_3116 PF02954 Bacterial regulatory protein, Fis family Tharo_3116 PF00158 Sigma-54 interaction domain Tharo_3116 PF00072 Response regulator receiver domain Tharo_3117 PF00512 His Kinase A (phospho-acceptor) domain Tharo_3117 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_3118 PF08281 Sigma-70, region 4 Tharo_3118 PF04542 Sigma-70 region 2 Tharo_3119 PF12848 ABC transporter Tharo_3119 PF00005 ABC transporter Tharo_3121 PF01323 DSBA-like thioredoxin domain Tharo_3122 PF00892 EamA-like transporter family Tharo_3124 PF02424 ApbE family Tharo_3125 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Tharo_3125 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Tharo_3127 PF01619 Proline dehydrogenase Tharo_3127 PF18327 Proline utilization A proline dehydrogenase N-terminal domain Tharo_3127 PF14850 DNA-binding domain of Proline dehydrogenase Tharo_3127 PF00171 Aldehyde dehydrogenase family Tharo_3128 PF13847 Methyltransferase domain Tharo_3129 PF02560 Cyanate lyase C-terminal domain Tharo_3133 PF13401 AAA domain Tharo_3133 PF01471 Putative peptidoglycan binding domain Tharo_3137 PF07669 Eco57I restriction-modification methylase Tharo_3137 PF12950 TaqI-like C-terminal specificity domain Tharo_3139 PF14535 AMP-binding enzyme C-terminal domain Tharo_3139 PF00501 AMP-binding enzyme Tharo_3141 PF00291 Pyridoxal-phosphate dependent enzyme Tharo_3142 PF04343 Protein of unknown function, DUF488 Tharo_3143 PF08546 Ketopantoate reductase PanE/ApbA C terminal Tharo_3143 PF02558 Ketopantoate reductase PanE/ApbA Tharo_3153 PF03641 Possible lysine decarboxylase Tharo_3154 PF03459 TOBE domain Tharo_3154 PF00005 ABC transporter Tharo_3155 PF00528 Binding-protein-dependent transport system inner membrane component Tharo_3159 PF02954 Bacterial regulatory protein, Fis family Tharo_3159 PF00158 Sigma-54 interaction domain Tharo_3159 PF00072 Response regulator receiver domain Tharo_3162 PF00115 Cytochrome C and Quinol oxidase polypeptide I Tharo_3163 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Tharo_3163 PF09125 Cytochrome C oxidase subunit II, transmembrane Tharo_3165 PF01205 Uncharacterized protein family UPF0029 Tharo_3165 PF09186 Domain of unknown function (DUF1949) Tharo_3168 PF01555 DNA methylase Tharo_3169 PF07516 SecA Wing and Scaffold domain Tharo_3169 PF02810 SEC-C motif Tharo_3169 PF07517 SecA DEAD-like domain Tharo_3169 PF01043 SecA preprotein cross-linking domain Tharo_3173 PF12631 MnmE helical domain Tharo_3173 PF01926 50S ribosome-binding GTPase Tharo_3173 PF10396 GTP-binding protein TrmE N-terminus Tharo_3175 PF03707 Bacterial signalling protein N terminal repeat Tharo_3175 PF00990 Diguanylate cyclase, GGDEF domain Tharo_3175 PF00563 EAL domain Tharo_3177 PF07683 Cobalamin synthesis protein cobW C-terminal domain Tharo_3177 PF02492 CobW/HypB/UreG, nucleotide-binding domain Tharo_3179 PF02321 Outer membrane efflux protein Tharo_3180 PF00873 AcrB/AcrD/AcrF family Tharo_3181 PF00529 HlyD membrane-fusion protein of T1SS Tharo_3181 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Tharo_3182 PF13977 BetI-type transcriptional repressor, C-terminal Tharo_3182 PF00440 Bacterial regulatory proteins, tetR family Tharo_3183 PF01367 5'-3' exonuclease, C-terminal SAM fold Tharo_3183 PF01612 3'-5' exonuclease Tharo_3183 PF00476 DNA polymerase family A Tharo_3183 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Tharo_3184 PF03641 Possible lysine decarboxylase Tharo_3187 PF01636 Phosphotransferase enzyme family Tharo_3190 PF01467 Cytidylyltransferase-like Tharo_3192 PF02590 Predicted SPOUT methyltransferase Tharo_3193 PF02545 Maf-like protein Tharo_3194 PF10150 Ribonuclease E/G family Tharo_3194 PF00575 S1 RNA binding domain Tharo_3195 PF17200 Single Cache domain 2 Tharo_3195 PF00672 HAMP domain Tharo_3195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tharo_3198 PF01330 RuvA N terminal domain Tharo_3198 PF07499 RuvA, C-terminal domain Tharo_3199 PF05491 RuvB C-terminal winged helix domain Tharo_3199 PF05496 Holliday junction DNA helicase RuvB P-loop domain Tharo_3199 PF17864 RuvB AAA lid domain Tharo_3200 PF00589 Phage integrase family Tharo_3200 PF02899 Phage integrase, N-terminal SAM-like domain Tharo_3202 PF01678 Diaminopimelate epimerase Tharo_3203 PF03279 Bacterial lipid A biosynthesis acyltransferase Tharo_3205 PF02772 S-adenosylmethionine synthetase, central domain Tharo_3205 PF02773 S-adenosylmethionine synthetase, C-terminal domain Tharo_3205 PF00438 S-adenosylmethionine synthetase, N-terminal domain Tharo_3206 PF01699 Sodium/calcium exchanger protein Tharo_3208 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tharo_3209 PF01903 CbiX Tharo_3210 PF02570 Precorrin-8X methylmutase Tharo_3211 PF01888 CbiD Tharo_3212 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tharo_3213 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tharo_3214 PF01890 Cobalamin synthesis G C-terminus Tharo_3214 PF11760 Cobalamin synthesis G N-terminal Tharo_3214 PF11761 Cobalamin biosynthesis central region Tharo_3216 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tharo_3216 PF07685 CobB/CobQ-like glutamine amidotransferase domain Tharo_3217 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tharo_3217 PF14824 Sirohaem biosynthesis protein central Tharo_3217 PF10414 Sirohaem synthase dimerisation region Tharo_3218 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Tharo_3218 PF12557 Cob(I)alamin adenosyltransferase N terminal Tharo_3219 PF00005 ABC transporter Tharo_3220 PF01032 FecCD transport family Tharo_3221 PF00593 TonB dependent receptor Tharo_3221 PF07715 TonB-dependent Receptor Plug Domain Tharo_3223 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Tharo_3224 PF05685 Putative restriction endonuclease Tharo_3225 PF02277 Phosphoribosyltransferase Tharo_3226 PF02654 Cobalamin-5-phosphate synthase Tharo_3232 PF05973 Phage derived protein Gp49-like (DUF891) Tharo_3242 PF00300 Histidine phosphatase superfamily (branch 1) Tharo_3243 PF01467 Cytidylyltransferase-like Tharo_3243 PF00294 pfkB family carbohydrate kinase Tharo_3244 PF01370 NAD dependent epimerase/dehydratase family Tharo_3245 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Tharo_3246 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Tharo_3247 PF00534 Glycosyl transferases group 1 Tharo_3247 PF13439 Glycosyltransferase Family 4 Tharo_3250 PF00111 2Fe-2S iron-sulfur cluster binding domain Tharo_3250 PF00970 Oxidoreductase FAD-binding domain Tharo_3250 PF00175 Oxidoreductase NAD-binding domain Tharo_3254 PF16916 Dimerisation domain of Zinc Transporter Tharo_3254 PF01545 Cation efflux family Tharo_3255 PF00486 Transcriptional regulatory protein, C terminal Tharo_3255 PF00072 Response regulator receiver domain Tharo_3256 PF08521 Two-component sensor kinase N-terminal Tharo_3256 PF00512 His Kinase A (phospho-acceptor) domain Tharo_3256 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_3257 PF00884 Sulfatase Tharo_3260 PF00664 ABC transporter transmembrane region Tharo_3260 PF00005 ABC transporter Tharo_3264 PF16861 Carbamoyltransferase C-terminus Tharo_3264 PF02543 Carbamoyltransferase N-terminus Tharo_3265 PF01757 Acyltransferase family Tharo_3266 PF01370 NAD dependent epimerase/dehydratase family Tharo_3267 PF00953 Glycosyl transferase family 4 Tharo_3268 PF02719 Polysaccharide biosynthesis protein Tharo_3269 PF01381 Helix-turn-helix Tharo_3270 PF07804 HipA-like C-terminal domain Tharo_3270 PF13657 HipA N-terminal domain Tharo_3271 PF00294 pfkB family carbohydrate kinase Tharo_3271 PF01467 Cytidylyltransferase-like Tharo_3272 PF03091 CutA1 divalent ion tolerance protein Tharo_3273 PF11412 Disulphide bond corrector protein DsbC Tharo_3273 PF02683 Cytochrome C biogenesis protein transmembrane region Tharo_3274 PF00677 Lumazine binding domain Tharo_3275 PF00925 GTP cyclohydrolase II Tharo_3275 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Tharo_3276 PF00885 6,7-dimethyl-8-ribityllumazine synthase Tharo_3277 PF01029 NusB family Tharo_3278 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Tharo_3279 PF02492 CobW/HypB/UreG, nucleotide-binding domain Tharo_3280 PF07503 HypF finger Tharo_3280 PF01300 Telomere recombination Tharo_3280 PF17788 HypF Kae1-like domain Tharo_3280 PF00708 Acylphosphatase Tharo_3281 PF01455 HupF/HypC family Tharo_3282 PF01924 Hydrogenase formation hypA family Tharo_3283 PF00586 AIR synthase related protein, N-terminal domain Tharo_3283 PF02769 AIR synthase related protein, C-terminal domain Tharo_3285 PF00171 Aldehyde dehydrogenase family Tharo_3289 PF00271 Helicase conserved C-terminal domain Tharo_3289 PF00270 DEAD/DEAH box helicase Tharo_3290 PF00216 Bacterial DNA-binding protein Tharo_3292 PF01613 Flavin reductase like domain Tharo_3293 PF10576 Iron-sulfur binding domain of endonuclease III Tharo_3293 PF00633 Helix-hairpin-helix motif Tharo_3293 PF00730 HhH-GPD superfamily base excision DNA repair protein Tharo_3293 PF14815 NUDIX domain Tharo_3295 PF00465 Iron-containing alcohol dehydrogenase Tharo_3296 PF00171 Aldehyde dehydrogenase family Tharo_3297 PF01590 GAF domain Tharo_3297 PF02954 Bacterial regulatory protein, Fis family Tharo_3297 PF00158 Sigma-54 interaction domain Tharo_3299 PF03458 UPF0126 domain Tharo_3301 PF00753 Metallo-beta-lactamase superfamily Tharo_3302 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Tharo_3302 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Tharo_3305 PF07690 Major Facilitator Superfamily Tharo_3306 PF03466 LysR substrate binding domain Tharo_3306 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_3307 PF00909 Ammonium Transporter Family Tharo_3308 PF03358 NADPH-dependent FMN reductase Tharo_3310 PF01323 DSBA-like thioredoxin domain Tharo_3312 PF00072 Response regulator receiver domain Tharo_3315 PF00593 TonB dependent receptor Tharo_3315 PF07715 TonB-dependent Receptor Plug Domain Tharo_3317 PF08340 Domain of unknown function (DUF1732) Tharo_3317 PF03755 YicC-like family, N-terminal region Tharo_3319 PF03725 3' exoribonuclease family, domain 2 Tharo_3319 PF01138 3' exoribonuclease family, domain 1 Tharo_3320 PF01725 Ham1 family Tharo_3321 PF06969 HemN C-terminal domain Tharo_3321 PF04055 Radical SAM superfamily Tharo_3322 PF00593 TonB dependent receptor Tharo_3322 PF07715 TonB-dependent Receptor Plug Domain Tharo_3323 PF13360 PQQ-like domain Tharo_3323 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Tharo_3324 PF03976 Polyphosphate kinase 2 (PPK2) Tharo_3328 PF12327 FtsZ family, C-terminal domain Tharo_3328 PF00091 Tubulin/FtsZ family, GTPase domain Tharo_3334 PF01343 Peptidase family S49 Tharo_3335 PF02390 Putative methyltransferase Tharo_3336 PF05690 Thiazole biosynthesis protein ThiG Tharo_3337 PF02597 ThiS family Tharo_3337 PF05690 Thiazole biosynthesis protein ThiG Tharo_3338 PF00561 alpha/beta hydrolase fold Tharo_3339 PF07021 Methionine biosynthesis protein MetW Tharo_3339 PF00561 alpha/beta hydrolase fold Tharo_3341 PF07690 Major Facilitator Superfamily Tharo_3343 PF00005 ABC transporter Tharo_3343 PF02687 FtsX-like permease family Tharo_3343 PF12704 MacB-like periplasmic core domain Tharo_3349 PF00270 DEAD/DEAH box helicase Tharo_3349 PF13749 Putative ATP-dependent DNA helicase recG C-terminal Tharo_3349 PF17191 RecG wedge domain Tharo_3350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_3350 PF08521 Two-component sensor kinase N-terminal Tharo_3350 PF00512 His Kinase A (phospho-acceptor) domain Tharo_3351 PF00072 Response regulator receiver domain Tharo_3351 PF00486 Transcriptional regulatory protein, C terminal Tharo_3355 PF00501 AMP-binding enzyme Tharo_3359 PF08918 PhoQ Sensor Tharo_3359 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_3360 PF00072 Response regulator receiver domain Tharo_3360 PF00486 Transcriptional regulatory protein, C terminal Tharo_3363 PF00005 ABC transporter Tharo_3364 PF00005 ABC transporter Tharo_3364 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tharo_3365 PF02653 Branched-chain amino acid transport system / permease component Tharo_3365 PF11862 Domain of unknown function (DUF3382) Tharo_3366 PF02653 Branched-chain amino acid transport system / permease component Tharo_3368 PF13193 AMP-binding enzyme C-terminal domain Tharo_3368 PF00501 AMP-binding enzyme Tharo_3369 PF01494 FAD binding domain Tharo_3371 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tharo_3371 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Tharo_3372 PF00107 Zinc-binding dehydrogenase Tharo_3372 PF08240 Alcohol dehydrogenase GroES-like domain Tharo_3373 PF03466 LysR substrate binding domain Tharo_3373 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tharo_3376 PF00970 Oxidoreductase FAD-binding domain Tharo_3376 PF00111 2Fe-2S iron-sulfur cluster binding domain Tharo_3376 PF00175 Oxidoreductase NAD-binding domain Tharo_3377 PF00072 Response regulator receiver domain Tharo_3377 PF00486 Transcriptional regulatory protein, C terminal Tharo_3378 PF08521 Two-component sensor kinase N-terminal Tharo_3378 PF00512 His Kinase A (phospho-acceptor) domain Tharo_3378 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_3380 PF00484 Carbonic anhydrase Tharo_3383 PF00155 Aminotransferase class I and II Tharo_3383 PF00392 Bacterial regulatory proteins, gntR family Tharo_3384 PF00271 Helicase conserved C-terminal domain Tharo_3384 PF17764 3′ DNA-binding domain (3′BD) Tharo_3384 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Tharo_3384 PF00270 DEAD/DEAH box helicase Tharo_3384 PF18074 Primosomal protein N C-terminal domain Tharo_3385 PF07282 Putative transposase DNA-binding domain Tharo_3385 PF12323 Helix-turn-helix domain Tharo_3385 PF01385 Probable transposase Tharo_3386 PF01208 Uroporphyrinogen decarboxylase (URO-D) Tharo_3387 PF02386 Cation transport protein Tharo_3388 PF02080 TrkA-C domain Tharo_3388 PF02254 TrkA-N domain Tharo_3389 PF00072 Response regulator receiver domain Tharo_3389 PF02954 Bacterial regulatory protein, Fis family Tharo_3389 PF00158 Sigma-54 interaction domain Tharo_3390 PF00672 HAMP domain Tharo_3390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tharo_3390 PF00989 PAS fold Tharo_3390 PF00512 His Kinase A (phospho-acceptor) domain Tharo_3392 PF01029 NusB family Tharo_3392 PF01189 16S rRNA methyltransferase RsmB/F Tharo_3393 PF17284 Spermidine synthase tetramerisation domain Tharo_3394 PF02675 S-adenosylmethionine decarboxylase Tharo_3395 PF01925 Sulfite exporter TauE/SafE Tharo_3396 PF11867 Domain of unknown function (DUF3387) Tharo_3396 PF18766 SWI2/SNF2 ATPase Tharo_3396 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Tharo_3398 PF01420 Type I restriction modification DNA specificity domain Tharo_3399 PF02384 N-6 DNA Methylase Tharo_3400 PF10396 GTP-binding protein TrmE N-terminus Tharo_3400 PF12631 MnmE helical domain Tharo_3400 PF01926 50S ribosome-binding GTPase Tharo_3401 PF14849 YidC periplasmic domain Tharo_3401 PF02096 60Kd inner membrane protein Tharo_3402 PF01809 Putative membrane protein insertion efficiency factor Tharo_3403 PF00825 Ribonuclease P Tharo_3404 PF00468 Ribosomal protein L34 Tharo_3405 PF07042 TrfA protein Tharo_3406 PF00436 Single-strand binding protein family Tharo_3407 PF16509 TrfB plasmid transcriptional repressor Tharo_3409 PF00437 Type II/IV secretion system protein Tharo_3410 PF04956 TrbC/VIRB2 family Tharo_3411 PF05101 Type IV secretory pathway, VirB3-like protein Tharo_3412 PF03135 CagE, TrbE, VirB family, component of type IV transporter system Tharo_3414 PF03524 Conjugal transfer protein Tharo_3416 PF03743 Bacterial conjugation TrbI-like protein Tharo_3424 PF05857 TraX protein Tharo_3428 PF02796 Helix-turn-helix domain of resolvase Tharo_3428 PF00239 Resolvase, N terminal domain Tharo_3432 PF00239 Resolvase, N terminal domain Tharo_3432 PF02796 Helix-turn-helix domain of resolvase Tharo_3434 PF00589 Phage integrase family Tharo_3434 PF13495 Phage integrase, N-terminal SAM-like domain Tharo_3435 PF13495 Phage integrase, N-terminal SAM-like domain Tharo_3435 PF00589 Phage integrase family Tharo_3436 PF00583 Acetyltransferase (GNAT) family Tharo_3437 PF05139 Erythromycin esterase Tharo_3438 PF00893 Small Multidrug Resistance protein Tharo_3439 PF00809 Pterin binding enzyme Tharo_3441 PF01695 IstB-like ATP binding protein Tharo_3442 PF00665 Integrase core domain Tharo_3443 PF00440 Bacterial regulatory proteins, tetR family Tharo_3443 PF02909 Tetracyclin repressor-like, C-terminal domain Tharo_3444 PF07690 Major Facilitator Superfamily Tharo_3445 PF00892 EamA-like transporter family Tharo_3447 PF08401 Domain of unknown function (DUF1738) Tharo_3447 PF18818 Metallopeptidase superfamily domain Tharo_3447 PF13362 Toprim domain Tharo_3449 PF01751 Toprim domain Tharo_3449 PF01131 DNA topoisomerase Tharo_3450 PF10502 Signal peptidase, peptidase S26 Tharo_3451 PF02534 Type IV secretory system Conjugative DNA transfer Tharo_3452 PF03432 Relaxase/Mobilisation nuclease domain Tharo_3452 PF18821 Large polyvalent protein-associated domain 7 Tharo_3455 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tharo_3456 PF11657 Transcriptional activator TraM Tharo_3460 PF02195 ParB-like nuclease domain Tharo_3460 PF08535 KorB domain Tharo_3460 PF06613 KorB C-terminal beta-barrel domain Tharo_3461 PF13614 AAA domain Tharo_3462 PF16509 TrfB plasmid transcriptional repressor Tharo_3463 PF10959 Protein of unknown function (DUF2761) Tharo_3464 PF10959 Protein of unknown function (DUF2761) Tharo_3465 PF17394 Uncharacterized KleE stable inheritance protein Tharo_3466 PF10892 Protein of unknown function (DUF2688) Tharo_3467 PF17383 Uncharacterized KorC regulated protein A Tharo_3470 PF03230 Antirestriction protein