Tharo_0001 SM00382 ATPases associated with a variety of cellular activities Tharo_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain Tharo_0002 SM00480 DNA polymerase III beta subunit Tharo_0003 SM00387 Histidine kinase-like ATPases Tharo_0003 SM00433 TopoisomeraseII Tharo_0006 SM00507 HNH nucleases Tharo_0023 SM00849 Metallo-beta-lactamase superfamily Tharo_0028 SM00729 Elongator protein 3, MiaB family, Radical SAM Tharo_0041 SM00244 prohibitin homologues Tharo_0049 SM00841 Elongation factor P, C-terminal Tharo_0049 SM01185 Tharo_0049 Tharo_0051 SM00729 Elongator protein 3, MiaB family, Radical SAM Tharo_0056 SM00257 Lysin motif Tharo_0059 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Tharo_0059 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Tharo_0059 SM00493 Tharo_0059 Tharo_0061 SM00344 helix_turn_helix ASNC type Tharo_0064 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tharo_0076 SM00116 Domain in cystathionine beta-synthase and other proteins. Tharo_0076 SM01091 Transporter associated domain Tharo_0079 SM00769 Water Stress and Hypersensitive response Tharo_0080 SM00382 ATPases associated with a variety of cellular activities Tharo_0085 SM00347 helix_turn_helix multiple antibiotic resistance protein Tharo_0092 SM00917 LeuA allosteric (dimerisation) domain Tharo_0093 SM00344 helix_turn_helix ASNC type Tharo_0105 SM01228 Tharo_0105 Tharo_0108 SM00470 ParB-like nuclease domain Tharo_0117 SM00382 ATPases associated with a variety of cellular activities Tharo_0120 SM00978 Tharo_0120 Tharo_0123 SM00448 cheY-homologous receiver domain Tharo_0123 SM00862 Transcriptional regulatory protein, C terminal Tharo_0124 SM00387 Histidine kinase-like ATPases Tharo_0124 SM00388 His Kinase A (phosphoacceptor) domain Tharo_0132 SM00487 DEAD-like helicases superfamily Tharo_0133 SM00845 GatB domain Tharo_0142 SM00936 Penicillin-binding protein 5, C-terminal domain Tharo_0146 SM00729 Elongator protein 3, MiaB family, Radical SAM Tharo_0151 SM00530 Helix-turn-helix XRE-family like proteins Tharo_0163 SM00346 helix_turn_helix isocitrate lyase regulation Tharo_0164 SM00346 helix_turn_helix isocitrate lyase regulation Tharo_0167 SM00822 Tharo_0167 Tharo_0180 SM00421 helix_turn_helix, Lux Regulon Tharo_0181 SM01018 B12 binding domain Tharo_0194 SM00729 Elongator protein 3, MiaB family, Radical SAM Tharo_0211 SM01126 Tharo_0211 Tharo_0218 SM00966 SpoVT / AbrB like domain Tharo_0233 SM00487 DEAD-like helicases superfamily Tharo_0233 SM00490 helicase superfamily c-terminal domain Tharo_0237 SM00849 Metallo-beta-lactamase superfamily Tharo_0251 SM00897 FIST N domain Tharo_0251 SM01204 Tharo_0251 Tharo_0252 SM00072 Guanylate kinase homologues. Tharo_0253 SM01409 Tharo_0253 Tharo_0254 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tharo_0254 SM00954 Region found in RelA / SpoT proteins Tharo_0256 SM00479 Tharo_0256 Tharo_0257 SM00100 Cyclic nucleotide-monophosphate binding domain Tharo_0257 SM00419 helix_turn_helix, cAMP Regulatory protein Tharo_0259 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_0259 SM00387 Histidine kinase-like ATPases Tharo_0260 SM00421 helix_turn_helix, Lux Regulon Tharo_0260 SM00448 cheY-homologous receiver domain Tharo_0261 SM00382 ATPases associated with a variety of cellular activities Tharo_0270 SM01005 Alanine racemase, C-terminal domain Tharo_0275 SM00530 Helix-turn-helix XRE-family like proteins Tharo_0277 SM00966 SpoVT / AbrB like domain Tharo_0285 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tharo_0293 SM00342 helix_turn_helix, arabinose operon control protein Tharo_0294 SM00342 helix_turn_helix, arabinose operon control protein Tharo_0329 SM00858 Tharo_0329 Tharo_0338 SM00047 Lysozyme subfamily 2 Tharo_0351 SM00382 ATPases associated with a variety of cellular activities Tharo_0357 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tharo_0362 SM00530 Helix-turn-helix XRE-family like proteins Tharo_0366 SM00530 Helix-turn-helix XRE-family like proteins Tharo_0376 SM00530 Helix-turn-helix XRE-family like proteins Tharo_0397 SM00073 Histidine Phosphotransfer domain Tharo_0397 SM00260 Two component signalling adaptor domain Tharo_0397 SM00387 Histidine kinase-like ATPases Tharo_0397 SM01231 Tharo_0397 Tharo_0398 SM00260 Two component signalling adaptor domain Tharo_0399 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tharo_0399 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_0400 SM00138 Methyltransferase, chemotaxis proteins Tharo_0401 SM00448 cheY-homologous receiver domain Tharo_0402 SM00448 cheY-homologous receiver domain Tharo_0406 SM00382 ATPases associated with a variety of cellular activities Tharo_0406 SM00962 SRP54-type protein, GTPase domain Tharo_0410 SM00382 ATPases associated with a variety of cellular activities Tharo_0411 SM00062 Bacterial periplasmic substrate-binding proteins Tharo_0411 SM00267 diguanylate cyclase Tharo_0424 SM01252 Tharo_0424 Tharo_0425 SM00318 Staphylococcal nuclease homologues Tharo_0438 SM00382 ATPases associated with a variety of cellular activities Tharo_0440 SM00363 S4 RNA-binding domain Tharo_0441 SM00996 S-adenosyl-L-homocysteine hydrolase Tharo_0441 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Tharo_0443 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tharo_0443 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_0445 SM00487 DEAD-like helicases superfamily Tharo_0445 SM00490 helicase superfamily c-terminal domain Tharo_0467 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Tharo_0471 SM00981 Tharo_0471 Tharo_0473 SM00382 ATPases associated with a variety of cellular activities Tharo_0481 SM00732 Likely ribonuclease with RNase H fold. Tharo_0490 SM00116 Domain in cystathionine beta-synthase and other proteins. Tharo_0490 SM00924 MgtE intracellular N domain Tharo_0494 SM00955 Tharo_0494 Tharo_0498 SM00487 DEAD-like helicases superfamily Tharo_0498 SM00490 helicase superfamily c-terminal domain Tharo_0498 SM00847 Helicase associated domain (HA2) Add an annotation Tharo_0505 SM00382 ATPases associated with a variety of cellular activities Tharo_0513 SM00925 MltA specific insert domain Tharo_0514 SM00382 ATPases associated with a variety of cellular activities Tharo_0523 SM00382 ATPases associated with a variety of cellular activities Tharo_0523 SM00448 cheY-homologous receiver domain Tharo_0524 SM00387 Histidine kinase-like ATPases Tharo_0524 SM00388 His Kinase A (phosphoacceptor) domain Tharo_0526 SM01230 Tharo_0526 Tharo_0528 SM00450 Rhodanese Homology Domain Tharo_0531 SM00155 Phospholipase D. Active site motifs. Tharo_0532 SM00881 CoA binding domain Tharo_0540 SM00382 ATPases associated with a variety of cellular activities Tharo_0541 SM00710 Parallel beta-helix repeats Tharo_0541 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses Tharo_0543 SM00900 Tharo_0543 Tharo_0546 SM00387 Histidine kinase-like ATPases Tharo_0547 SM00448 cheY-homologous receiver domain Tharo_0548 SM00267 diguanylate cyclase Tharo_0548 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_0552 SM01400 Tharo_0552 Tharo_0556 SM00028 Tetratricopeptide repeats Tharo_0557 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Tharo_0557 SM01232 Tharo_0557 Tharo_0563 SM00382 ATPases associated with a variety of cellular activities Tharo_0563 SM00962 SRP54-type protein, GTPase domain Tharo_0563 SM00963 SRP54-type protein, helical bundle domain Tharo_0564 SM00382 ATPases associated with a variety of cellular activities Tharo_0568 SM00382 ATPases associated with a variety of cellular activities Tharo_0571 SM00849 Metallo-beta-lactamase superfamily Tharo_0572 SM00966 SpoVT / AbrB like domain Tharo_0574 SM00487 DEAD-like helicases superfamily Tharo_0574 SM00490 helicase superfamily c-terminal domain Tharo_0589 SM00382 ATPases associated with a variety of cellular activities Tharo_0590 SM00220 Serine/Threonine protein kinases, catalytic domain Tharo_0592 SM00327 von Willebrand factor (vWF) type A domain Tharo_0593 SM00382 ATPases associated with a variety of cellular activities Tharo_0601 SM00729 Elongator protein 3, MiaB family, Radical SAM Tharo_0604 SM00116 Domain in cystathionine beta-synthase and other proteins. Tharo_0604 SM01091 Transporter associated domain Tharo_0609 SM00563 Phosphate acyltransferases Tharo_0614 SM00116 Domain in cystathionine beta-synthase and other proteins. Tharo_0621 SM00382 ATPases associated with a variety of cellular activities Tharo_0623 SM00382 ATPases associated with a variety of cellular activities Tharo_0629 SM00382 ATPases associated with a variety of cellular activities Tharo_0647 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tharo_0652 SM00881 CoA binding domain Tharo_0653 SM00240 Forkhead associated domain Tharo_0654 SM00849 Metallo-beta-lactamase superfamily Tharo_0655 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Tharo_0655 SM00382 ATPases associated with a variety of cellular activities Tharo_0662 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain Tharo_0663 SM00849 Metallo-beta-lactamase superfamily Tharo_0663 SM01027 Beta-Casp domain Tharo_0665 SM01400 Tharo_0665 Tharo_0674 SM00822 Tharo_0674 Tharo_0677 SM00382 ATPases associated with a variety of cellular activities Tharo_0687 SM00966 SpoVT / AbrB like domain Tharo_0716 SM00487 DEAD-like helicases superfamily Tharo_0733 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Tharo_0733 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Tharo_0733 SM00493 Tharo_0733 Tharo_0750 SM00341 Helicase and RNase D C-terminal Tharo_0750 SM00487 DEAD-like helicases superfamily Tharo_0750 SM00490 helicase superfamily c-terminal domain Tharo_0750 SM00956 Tharo_0750 Tharo_0774 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain Tharo_0775 SM01400 Tharo_0775 Tharo_0776 SM00240 Forkhead associated domain Tharo_0779 SM00052 Putative diguanylate phosphodiesterase Tharo_0779 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_0779 SM00091 PAS domain Tharo_0779 SM00267 diguanylate cyclase Tharo_0790 SM00870 Tharo_0790 Tharo_0792 SM00382 ATPases associated with a variety of cellular activities Tharo_0800 SM00900 Tharo_0800 Tharo_0806 SM00487 DEAD-like helicases superfamily Tharo_0806 SM00490 helicase superfamily c-terminal domain Tharo_0808 SM00966 SpoVT / AbrB like domain Tharo_0810 SM00966 SpoVT / AbrB like domain Tharo_0814 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Tharo_0821 SM01219 Tharo_0821 Tharo_0823 SM00842 Cell division protein FtsA Tharo_0827 SM00965 Secretin and TonB N terminus short domain Tharo_0830 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tharo_0846 SM00267 diguanylate cyclase Tharo_0849 SM00829 Enoylreductase Tharo_0859 SM00644 Tharo_0859 Tharo_0862 SM00919 Malic enzyme, NAD binding domain Tharo_0862 SM01274 Tharo_0862 Tharo_0867 SM00346 helix_turn_helix isocitrate lyase regulation Tharo_0875 SM00091 PAS domain Tharo_0875 SM00267 diguanylate cyclase Tharo_0876 SM00363 S4 RNA-binding domain Tharo_0880 SM00382 ATPases associated with a variety of cellular activities Tharo_0883 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain Tharo_0888 SM00487 DEAD-like helicases superfamily Tharo_0888 SM00490 helicase superfamily c-terminal domain Tharo_0894 SM00450 Rhodanese Homology Domain Tharo_0898 SM00563 Phosphate acyltransferases Tharo_0904 SM00878 Biotin carboxylase C-terminal domain Tharo_0909 SM00749 bacterial OsmY and nodulation domain Tharo_0914 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tharo_0914 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_0928 SM00842 Cell division protein FtsA Tharo_0929 SM00864 Tubulin/FtsZ family, GTPase domain Tharo_0929 SM00865 Tubulin/FtsZ family, C-terminal domain Tharo_0936 SM00382 ATPases associated with a variety of cellular activities Tharo_0947 SM01321 Tharo_0947 Tharo_0952 SM00530 Helix-turn-helix XRE-family like proteins Tharo_0954 SM01321 Tharo_0954 Tharo_0959 SM00382 ATPases associated with a variety of cellular activities Tharo_0960 SM00382 ATPases associated with a variety of cellular activities Tharo_0964 SM00957 SecA DEAD-like domain Tharo_0964 SM00958 SecA preprotein cross-linking domain Tharo_0970 SM01323 Tharo_0970 Tharo_0975 SM00530 Helix-turn-helix XRE-family like proteins Tharo_0980 SM00977 TilS substrate C-terminal domain Tharo_0981 SM00421 helix_turn_helix, Lux Regulon Tharo_0981 SM00448 cheY-homologous receiver domain Tharo_0982 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_0982 SM00091 PAS domain Tharo_0982 SM00387 Histidine kinase-like ATPases Tharo_0982 SM00388 His Kinase A (phosphoacceptor) domain Tharo_0987 SM00562 Tharo_0987 Tharo_0989 SM00028 Tetratricopeptide repeats Tharo_0994 SM00564 beta-propeller repeat Tharo_0995 SM00382 ATPases associated with a variety of cellular activities Tharo_0998 SM00244 prohibitin homologues Tharo_0999 SM00244 prohibitin homologues Tharo_1002 SM00788 Adenylosuccinate synthetase Tharo_1005 SM00316 Ribosomal protein S1-like RNA-binding domain Tharo_1005 SM00357 Cold shock protein domain Tharo_1005 SM00955 Tharo_1005 Tharo_1006 SM00967 RNA 2'-O ribose methyltransferase substrate binding Tharo_1011 SM00220 Serine/Threonine protein kinases, catalytic domain Tharo_1011 SM00331 Sigma factor PP2C-like phosphatases Tharo_1011 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Tharo_1012 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Tharo_1013 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tharo_1014 SM00448 cheY-homologous receiver domain Tharo_1015 SM00028 Tetratricopeptide repeats Tharo_1015 SM00138 Methyltransferase, chemotaxis proteins Tharo_1016 SM00073 Histidine Phosphotransfer domain Tharo_1016 SM00260 Two component signalling adaptor domain Tharo_1016 SM00387 Histidine kinase-like ATPases Tharo_1016 SM00448 cheY-homologous receiver domain Tharo_1016 SM01231 Tharo_1016 Tharo_1017 SM00448 cheY-homologous receiver domain Tharo_1018 SM00267 diguanylate cyclase Tharo_1018 SM00448 cheY-homologous receiver domain Tharo_1019 SM00260 Two component signalling adaptor domain Tharo_1021 SM00267 diguanylate cyclase Tharo_1021 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_1021 SM01079 Tharo_1021 Tharo_1026 SM00382 ATPases associated with a variety of cellular activities Tharo_1028 SM00493 Tharo_1028 Tharo_1046 SM00796 Allophanate hydrolase subunit 1 Tharo_1046 SM00797 Allophanate hydrolase subunit 2 Tharo_1047 SM00883 Chaperonin 10 Kd subunit Tharo_1049 SM00448 cheY-homologous receiver domain Tharo_1049 SM00862 Transcriptional regulatory protein, C terminal Tharo_1050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_1050 SM00387 Histidine kinase-like ATPases Tharo_1050 SM00388 His Kinase A (phosphoacceptor) domain Tharo_1056 SM00937 Tharo_1056 Tharo_1060 SM00834 Putative regulatory protein Tharo_1064 SM01091 Transporter associated domain Tharo_1066 SM00382 ATPases associated with a variety of cellular activities Tharo_1066 SM00962 SRP54-type protein, GTPase domain Tharo_1066 SM00963 SRP54-type protein, helical bundle domain Tharo_1068 SM00852 Probable molybdopterin binding domain Tharo_1071 SM00448 cheY-homologous receiver domain Tharo_1071 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tharo_1080 SM00853 MutL C terminal dimerisation domain Tharo_1080 SM01340 Tharo_1080 Tharo_1122 SM00822 Tharo_1122 Tharo_1129 SM00347 helix_turn_helix multiple antibiotic resistance protein Tharo_1131 SM00530 Helix-turn-helix XRE-family like proteins Tharo_1139 SM01126 Tharo_1139 Tharo_1142 SM00382 ATPases associated with a variety of cellular activities Tharo_1143 SM00382 ATPases associated with a variety of cellular activities Tharo_1147 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tharo_1148 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Tharo_1156 SM00822 Tharo_1156 Tharo_1157 SM00822 Tharo_1157 Tharo_1159 SM00729 Elongator protein 3, MiaB family, Radical SAM Tharo_1170 SM00357 Cold shock protein domain Tharo_1170 SM00382 ATPases associated with a variety of cellular activities Tharo_1170 SM00959 Rho termination factor, N-terminal domain Tharo_1173 SM00116 Domain in cystathionine beta-synthase and other proteins. Tharo_1183 SM01329 Tharo_1183 Tharo_1184 SM00859 Semialdehyde dehydrogenase, NAD binding domain Tharo_1200 SM00840 Tharo_1200 Tharo_1202 SM00271 DnaJ molecular chaperone homology domain Tharo_1205 SM00434 DNA Topoisomerase IV Tharo_1207 SM00830 Chorismate mutase type II Tharo_1211 SM00316 Ribosomal protein S1-like RNA-binding domain Tharo_1212 SM00411 bacterial (prokaryotic) histone like domain Tharo_1214 SM00028 Tetratricopeptide repeats Tharo_1222 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Tharo_1227 SM00873 B3/4 domain Tharo_1227 SM00874 tRNA synthetase B5 domain Tharo_1227 SM00896 Ferredoxin-fold anticodon binding domain Tharo_1228 SM00411 bacterial (prokaryotic) histone like domain Tharo_1229 SM00422 helix_turn_helix, mercury resistance Tharo_1233 SM00257 Lysin motif Tharo_1238 SM01130 Tharo_1238 Tharo_1266 SM00422 helix_turn_helix, mercury resistance Tharo_1269 SM00900 Tharo_1269 Tharo_1274 SM00932 Scaffold protein Nfu/NifU N terminal Tharo_1275 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Tharo_1279 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Tharo_1279 SM00091 PAS domain Tharo_1279 SM00387 Histidine kinase-like ATPases Tharo_1279 SM00388 His Kinase A (phosphoacceptor) domain Tharo_1279 SM00448 cheY-homologous receiver domain Tharo_1280 SM00448 cheY-homologous receiver domain Tharo_1280 SM00862 Transcriptional regulatory protein, C terminal Tharo_1286 SM00347 helix_turn_helix multiple antibiotic resistance protein Tharo_1288 SM00881 CoA binding domain Tharo_1298 SM00116 Domain in cystathionine beta-synthase and other proteins. Tharo_1312 SM00822 Tharo_1312 Tharo_1315 SM00382 ATPases associated with a variety of cellular activities Tharo_1316 SM00382 ATPases associated with a variety of cellular activities Tharo_1318 SM00434 DNA Topoisomerase IV Tharo_1321 SM00387 Histidine kinase-like ATPases Tharo_1321 SM00433 TopoisomeraseII Tharo_1328 SM01192 Tharo_1328 Tharo_1328 SM01193 Tharo_1328 Tharo_1338 SM01322 Tharo_1338 Tharo_1339 SM00052 Putative diguanylate phosphodiesterase Tharo_1339 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_1339 SM00091 PAS domain Tharo_1339 SM00267 diguanylate cyclase Tharo_1340 SM00487 DEAD-like helicases superfamily Tharo_1340 SM00490 helicase superfamily c-terminal domain Tharo_1341 SM00357 Cold shock protein domain Tharo_1343 SM00481 DNA polymerase alpha chain like domain Tharo_1349 SM00363 S4 RNA-binding domain Tharo_1351 SM00316 Ribosomal protein S1-like RNA-binding domain Tharo_1355 SM01387 Tharo_1355 Tharo_1356 SM00316 Ribosomal protein S1-like RNA-binding domain Tharo_1356 SM00322 K homology RNA-binding domain Tharo_1373 SM00382 ATPases associated with a variety of cellular activities Tharo_1379 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Tharo_1379 SM00267 diguanylate cyclase Tharo_1387 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Tharo_1388 SM00448 cheY-homologous receiver domain Tharo_1389 SM00073 Histidine Phosphotransfer domain Tharo_1390 SM00052 Putative diguanylate phosphodiesterase Tharo_1390 SM00448 cheY-homologous receiver domain Tharo_1391 SM00073 Histidine Phosphotransfer domain Tharo_1391 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_1391 SM00091 PAS domain Tharo_1391 SM00387 Histidine kinase-like ATPases Tharo_1391 SM00388 His Kinase A (phosphoacceptor) domain Tharo_1391 SM00448 cheY-homologous receiver domain Tharo_1391 SM01079 Tharo_1391 Tharo_1394 SM00671 Sel1-like repeats. Tharo_1402 SM00937 Tharo_1402 Tharo_1405 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tharo_1405 SM00866 Tharo_1405 Tharo_1412 SM00861 Transketolase, pyrimidine binding domain Tharo_1419 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tharo_1433 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Tharo_1443 SM00382 ATPases associated with a variety of cellular activities Tharo_1444 SM00710 Parallel beta-helix repeats Tharo_1444 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses Tharo_1446 SM00900 Tharo_1446 Tharo_1448 SM00729 Elongator protein 3, MiaB family, Radical SAM Tharo_1449 SM00450 Rhodanese Homology Domain Tharo_1453 SM00382 ATPases associated with a variety of cellular activities Tharo_1454 SM00849 Metallo-beta-lactamase superfamily Tharo_1458 SM00479 Tharo_1458 Tharo_1473 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_1473 SM00091 PAS domain Tharo_1473 SM00267 diguanylate cyclase Tharo_1478 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tharo_1478 SM00866 Tharo_1478 Tharo_1485 SM00861 Transketolase, pyrimidine binding domain Tharo_1489 SM00487 DEAD-like helicases superfamily Tharo_1489 SM00491 Tharo_1489 Tharo_1491 SM00852 Probable molybdopterin binding domain Tharo_1509 SM00248 ankyrin repeats Tharo_1511 SM00342 helix_turn_helix, arabinose operon control protein Tharo_1513 SM01092 CO dehydrogenase flavoprotein C-terminal domain Tharo_1514 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Tharo_1516 SM00347 helix_turn_helix multiple antibiotic resistance protein Tharo_1517 SM00382 ATPases associated with a variety of cellular activities Tharo_1518 SM00327 von Willebrand factor (vWF) type A domain Tharo_1525 SM00729 Elongator protein 3, MiaB family, Radical SAM Tharo_1537 SM00382 ATPases associated with a variety of cellular activities Tharo_1543 SM00091 PAS domain Tharo_1543 SM00387 Histidine kinase-like ATPases Tharo_1543 SM00388 His Kinase A (phosphoacceptor) domain Tharo_1544 SM00382 ATPases associated with a variety of cellular activities Tharo_1544 SM00448 cheY-homologous receiver domain Tharo_1564 SM01209 Tharo_1564 Tharo_1564 SM01210 Tharo_1564 Tharo_1565 SM00798 AICARFT/IMPCHase bienzyme Tharo_1565 SM00851 MGS-like domain Tharo_1586 SM00382 ATPases associated with a variety of cellular activities Tharo_1591 SM00487 DEAD-like helicases superfamily Tharo_1591 SM00490 helicase superfamily c-terminal domain Tharo_1592 SM00226 Low molecular weight phosphatase family Tharo_1593 SM00316 Ribosomal protein S1-like RNA-binding domain Tharo_1594 SM00363 S4 RNA-binding domain Tharo_1602 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Tharo_1603 SM00822 Tharo_1603 Tharo_1605 SM00825 Beta-ketoacyl synthase Tharo_1612 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tharo_1617 SM00358 Double-stranded RNA binding motif Tharo_1617 SM00535 Ribonuclease III family Tharo_1623 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Tharo_1623 SM00465 GIY-YIG type nucleases (URI domain) Tharo_1629 SM00729 Elongator protein 3, MiaB family, Radical SAM Tharo_1645 SM00382 ATPases associated with a variety of cellular activities Tharo_1653 SM00861 Transketolase, pyrimidine binding domain Tharo_1662 SM00904 Riboflavin kinase Tharo_1663 SM00646 Tharo_1663 Tharo_1679 SM00448 cheY-homologous receiver domain Tharo_1683 SM00382 ATPases associated with a variety of cellular activities Tharo_1708 SM00052 Putative diguanylate phosphodiesterase Tharo_1708 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Tharo_1708 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_1708 SM00091 PAS domain Tharo_1708 SM00267 diguanylate cyclase Tharo_1712 SM00387 Histidine kinase-like ATPases Tharo_1712 SM00388 His Kinase A (phosphoacceptor) domain Tharo_1713 SM00448 cheY-homologous receiver domain Tharo_1714 SM00479 Tharo_1714 Tharo_1716 SM00116 Domain in cystathionine beta-synthase and other proteins. Tharo_1717 SM00382 ATPases associated with a variety of cellular activities Tharo_1717 SM01086 C-terminal, D2-small domain, of ClpB protein Tharo_1724 SM00100 Cyclic nucleotide-monophosphate binding domain Tharo_1724 SM00419 helix_turn_helix, cAMP Regulatory protein Tharo_1727 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Tharo_1731 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Tharo_1731 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_1731 SM00387 Histidine kinase-like ATPases Tharo_1732 SM00421 helix_turn_helix, Lux Regulon Tharo_1732 SM00448 cheY-homologous receiver domain Tharo_1733 SM00347 helix_turn_helix multiple antibiotic resistance protein Tharo_1738 SM00116 Domain in cystathionine beta-synthase and other proteins. Tharo_1738 SM01240 Tharo_1738 Tharo_1740 SM00487 DEAD-like helicases superfamily Tharo_1740 SM00490 helicase superfamily c-terminal domain Tharo_1745 SM00887 Ethylbenzene dehydrogenase Tharo_1752 SM00729 Elongator protein 3, MiaB family, Radical SAM Tharo_1755 SM00100 Cyclic nucleotide-monophosphate binding domain Tharo_1755 SM00419 helix_turn_helix, cAMP Regulatory protein Tharo_1756 SM00327 von Willebrand factor (vWF) type A domain Tharo_1762 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Tharo_1765 SM00646 Tharo_1765 Tharo_1769 SM00382 ATPases associated with a variety of cellular activities Tharo_1775 SM00479 Tharo_1775 Tharo_1776 SM00116 Domain in cystathionine beta-synthase and other proteins. Tharo_1777 SM00670 Large family of predicted nucleotide-binding domains Tharo_1791 SM00316 Ribosomal protein S1-like RNA-binding domain Tharo_1791 SM00732 Likely ribonuclease with RNase H fold. Tharo_1793 SM00881 CoA binding domain Tharo_1795 SM00450 Rhodanese Homology Domain Tharo_1798 SM00382 ATPases associated with a variety of cellular activities Tharo_1804 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Tharo_1804 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Tharo_1807 SM00945 ProQ/FINO family Tharo_1812 SM00342 helix_turn_helix, arabinose operon control protein Tharo_1816 SM00382 ATPases associated with a variety of cellular activities Tharo_1817 SM00382 ATPases associated with a variety of cellular activities Tharo_1821 SM00893 Electron transfer flavoprotein domain Tharo_1822 SM00893 Electron transfer flavoprotein domain Tharo_1823 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_1823 SM00387 Histidine kinase-like ATPases Tharo_1823 SM00388 His Kinase A (phosphoacceptor) domain Tharo_1824 SM00382 ATPases associated with a variety of cellular activities Tharo_1824 SM00448 cheY-homologous receiver domain Tharo_1829 SM00382 ATPases associated with a variety of cellular activities Tharo_1830 SM00382 ATPases associated with a variety of cellular activities Tharo_1839 SM00387 Histidine kinase-like ATPases Tharo_1839 SM00388 His Kinase A (phosphoacceptor) domain Tharo_1840 SM00382 ATPases associated with a variety of cellular activities Tharo_1840 SM00448 cheY-homologous receiver domain Tharo_1846 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tharo_1846 SM00895 Tharo_1846 Tharo_1850 SM00422 helix_turn_helix, mercury resistance Tharo_1852 SM00387 Histidine kinase-like ATPases Tharo_1852 SM00388 His Kinase A (phosphoacceptor) domain Tharo_1853 SM00448 cheY-homologous receiver domain Tharo_1853 SM00862 Transcriptional regulatory protein, C terminal Tharo_1862 SM00248 ankyrin repeats Tharo_1868 SM00881 CoA binding domain Tharo_1883 SM00220 Serine/Threonine protein kinases, catalytic domain Tharo_1891 SM00387 Histidine kinase-like ATPases Tharo_1891 SM00388 His Kinase A (phosphoacceptor) domain Tharo_1891 SM00448 cheY-homologous receiver domain Tharo_1892 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Tharo_1893 SM00851 MGS-like domain Tharo_1893 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Tharo_1895 SM01103 Tharo_1895 Tharo_1897 SM00382 ATPases associated with a variety of cellular activities Tharo_1903 SM00382 ATPases associated with a variety of cellular activities Tharo_1907 SM00382 ATPases associated with a variety of cellular activities Tharo_1909 SM00226 Low molecular weight phosphatase family Tharo_1910 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Tharo_1919 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tharo_1920 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tharo_1930 SM00938 Nitrogen regulatory protein P-II Tharo_1931 SM00463 Small MutS-related domain Tharo_1933 SM00100 Cyclic nucleotide-monophosphate binding domain Tharo_1933 SM00419 helix_turn_helix, cAMP Regulatory protein Tharo_1934 SM00843 Tharo_1934 Tharo_1936 SM00382 ATPases associated with a variety of cellular activities Tharo_1939 SM00062 Bacterial periplasmic substrate-binding proteins Tharo_1947 SM00052 Putative diguanylate phosphodiesterase Tharo_1947 SM00267 diguanylate cyclase Tharo_1948 SM00487 DEAD-like helicases superfamily Tharo_1948 SM00490 helicase superfamily c-terminal domain Tharo_1948 SM00982 Tharo_1948 Tharo_1948 SM01058 CarD-like/TRCF domain Tharo_1957 SM00954 Region found in RelA / SpoT proteins Tharo_1961 SM00382 ATPases associated with a variety of cellular activities Tharo_1973 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_1973 SM00387 Histidine kinase-like ATPases Tharo_1973 SM00388 His Kinase A (phosphoacceptor) domain Tharo_1974 SM00448 cheY-homologous receiver domain Tharo_1974 SM00862 Transcriptional regulatory protein, C terminal Tharo_1978 SM00986 Uracil DNA glycosylase superfamily Tharo_1978 SM00987 UreE urease accessory protein, C-terminal domain Tharo_1981 SM00382 ATPases associated with a variety of cellular activities Tharo_1982 SM00869 Autotransporter beta-domain Tharo_1986 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tharo_1987 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tharo_1993 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_1993 SM00387 Histidine kinase-like ATPases Tharo_1993 SM00388 His Kinase A (phosphoacceptor) domain Tharo_1994 SM00448 cheY-homologous receiver domain Tharo_1994 SM00862 Transcriptional regulatory protein, C terminal Tharo_1999 SM01018 B12 binding domain Tharo_2007 SM00670 Large family of predicted nucleotide-binding domains Tharo_2013 SM00062 Bacterial periplasmic substrate-binding proteins Tharo_2014 SM00382 ATPases associated with a variety of cellular activities Tharo_2021 SM00530 Helix-turn-helix XRE-family like proteins Tharo_2029 SM00382 ATPases associated with a variety of cellular activities Tharo_2034 SM00631 Tharo_2034 Tharo_2046 SM00382 ATPases associated with a variety of cellular activities Tharo_2048 SM00966 SpoVT / AbrB like domain Tharo_2052 SM00967 RNA 2'-O ribose methyltransferase substrate binding Tharo_2058 SM00935 Outer membrane protein (OmpH-like) Tharo_2060 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tharo_2069 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tharo_2071 SM00838 Elongation factor G C-terminus Tharo_2073 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Tharo_2073 SM00292 breast cancer carboxy-terminal domain Tharo_2073 SM00532 Ligase N family Tharo_2074 SM00771 ZipA, C-terminal domain (FtsZ-binding) Tharo_2084 SM00271 DnaJ molecular chaperone homology domain Tharo_2095 SM01040 BRO family, N-terminal domain Tharo_2144 SM00843 Tharo_2144 Tharo_2146 SM00479 Tharo_2146 Tharo_2160 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Tharo_2160 SM00534 ATPase domain of DNA mismatch repair MUTS family Tharo_2163 SM00116 Domain in cystathionine beta-synthase and other proteins. Tharo_2164 SM00479 Tharo_2164 Tharo_2167 SM00849 Metallo-beta-lactamase superfamily Tharo_2169 SM00382 ATPases associated with a variety of cellular activities Tharo_2174 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tharo_2175 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tharo_2205 SM00900 Tharo_2205 Tharo_2207 SM00478 endonuclease III Tharo_2207 SM00525 Tharo_2207 Tharo_2212 SM00478 endonuclease III Tharo_2212 SM01009 AlkA N-terminal domain Tharo_2217 SM00382 ATPases associated with a variety of cellular activities Tharo_2219 SM00347 helix_turn_helix multiple antibiotic resistance protein Tharo_2221 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tharo_2221 SM00895 Tharo_2221 Tharo_2224 SM00387 Histidine kinase-like ATPases Tharo_2245 SM00382 ATPases associated with a variety of cellular activities Tharo_2249 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_2249 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tharo_2249 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_2250 SM00138 Methyltransferase, chemotaxis proteins Tharo_2252 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_2252 SM00091 PAS domain Tharo_2252 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tharo_2252 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_2253 SM00387 Histidine kinase-like ATPases Tharo_2253 SM00388 His Kinase A (phosphoacceptor) domain Tharo_2254 SM00421 helix_turn_helix, Lux Regulon Tharo_2254 SM00448 cheY-homologous receiver domain Tharo_2255 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Tharo_2266 SM00448 cheY-homologous receiver domain Tharo_2268 SM00138 Methyltransferase, chemotaxis proteins Tharo_2269 SM00260 Two component signalling adaptor domain Tharo_2270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tharo_2271 SM00073 Histidine Phosphotransfer domain Tharo_2271 SM00260 Two component signalling adaptor domain Tharo_2271 SM00387 Histidine kinase-like ATPases Tharo_2271 SM01231 Tharo_2271 Tharo_2273 SM00448 cheY-homologous receiver domain Tharo_2274 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tharo_2275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_2275 SM00387 Histidine kinase-like ATPases Tharo_2275 SM00388 His Kinase A (phosphoacceptor) domain Tharo_2276 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_2276 SM00091 PAS domain Tharo_2276 SM00387 Histidine kinase-like ATPases Tharo_2276 SM00448 cheY-homologous receiver domain Tharo_2277 SM00421 helix_turn_helix, Lux Regulon Tharo_2277 SM00448 cheY-homologous receiver domain Tharo_2278 SM00052 Putative diguanylate phosphodiesterase Tharo_2278 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_2278 SM00091 PAS domain Tharo_2278 SM00267 diguanylate cyclase Tharo_2278 SM00448 cheY-homologous receiver domain Tharo_2283 SM00422 helix_turn_helix, mercury resistance Tharo_2286 SM00729 Elongator protein 3, MiaB family, Radical SAM Tharo_2287 SM00100 Cyclic nucleotide-monophosphate binding domain Tharo_2287 SM00419 helix_turn_helix, cAMP Regulatory protein Tharo_2289 SM00100 Cyclic nucleotide-monophosphate binding domain Tharo_2289 SM00419 helix_turn_helix, cAMP Regulatory protein Tharo_2290 SM00849 Metallo-beta-lactamase superfamily Tharo_2290 SM01027 Beta-Casp domain Tharo_2306 SM00838 Elongation factor G C-terminus Tharo_2306 SM00889 Elongation factor G, domain IV Tharo_2318 SM00357 Cold shock protein domain Tharo_2320 SM00382 ATPases associated with a variety of cellular activities Tharo_2320 SM01086 C-terminal, D2-small domain, of ClpB protein Tharo_2324 SM00448 cheY-homologous receiver domain Tharo_2324 SM00862 Transcriptional regulatory protein, C terminal Tharo_2325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_2325 SM00387 Histidine kinase-like ATPases Tharo_2325 SM00388 His Kinase A (phosphoacceptor) domain Tharo_2328 SM00450 Rhodanese Homology Domain Tharo_2330 SM00363 S4 RNA-binding domain Tharo_2333 SM00859 Semialdehyde dehydrogenase, NAD binding domain Tharo_2346 SM00382 ATPases associated with a variety of cellular activities Tharo_2346 SM00448 cheY-homologous receiver domain Tharo_2352 SM00880 Tharo_2352 Tharo_2352 SM01118 Tharo_2352 Tharo_2353 SM00855 Phosphoglycerate mutase family Tharo_2365 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Tharo_2374 SM00852 Probable molybdopterin binding domain Tharo_2378 SM00855 Phosphoglycerate mutase family Tharo_2387 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tharo_2387 SM00245 tail specific protease Tharo_2389 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Tharo_2390 SM00450 Rhodanese Homology Domain Tharo_2397 SM00729 Elongator protein 3, MiaB family, Radical SAM Tharo_2397 SM00876 Biotin and Thiamin Synthesis associated domain Tharo_2400 SM01004 Delta-aminolevulinic acid dehydratase Tharo_2403 SM00852 Probable molybdopterin binding domain Tharo_2417 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_2417 SM00387 Histidine kinase-like ATPases Tharo_2417 SM00388 His Kinase A (phosphoacceptor) domain Tharo_2418 SM00448 cheY-homologous receiver domain Tharo_2418 SM00862 Transcriptional regulatory protein, C terminal Tharo_2425 SM00746 metallochaperone-like domain Tharo_2428 SM00861 Transketolase, pyrimidine binding domain Tharo_2429 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Tharo_2433 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Tharo_2442 SM00052 Putative diguanylate phosphodiesterase Tharo_2442 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_2442 SM00267 diguanylate cyclase Tharo_2443 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tharo_2445 SM00419 helix_turn_helix, cAMP Regulatory protein Tharo_2448 SM01011 Aminopeptidase P, N-terminal domain Tharo_2454 SM00650 Ribosomal RNA adenine dimethylases Tharo_2455 SM00481 DNA polymerase alpha chain like domain Tharo_2456 SM00829 Enoylreductase Tharo_2458 SM00919 Malic enzyme, NAD binding domain Tharo_2458 SM01274 Tharo_2458 Tharo_2459 SM00220 Serine/Threonine protein kinases, catalytic domain Tharo_2464 SM00382 ATPases associated with a variety of cellular activities Tharo_2465 SM00421 helix_turn_helix, Lux Regulon Tharo_2479 SM00528 Domain in histone-like proteins of HNS family Tharo_2480 SM00905 Dihydroneopterin aldolase Tharo_2481 SM01207 Tharo_2481 Tharo_2484 SM00400 zinc finger Tharo_2484 SM00493 Tharo_2484 Tharo_2484 SM00766 DNA primase DnaG DnaB-binding Tharo_2498 SM00116 Domain in cystathionine beta-synthase and other proteins. Tharo_2502 SM00831 Cation transporter/ATPase, N-terminus Tharo_2508 SM00917 LeuA allosteric (dimerisation) domain Tharo_2524 SM00052 Putative diguanylate phosphodiesterase Tharo_2524 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_2524 SM00267 diguanylate cyclase Tharo_2524 SM00448 cheY-homologous receiver domain Tharo_2525 SM00448 cheY-homologous receiver domain Tharo_2526 SM00062 Bacterial periplasmic substrate-binding proteins Tharo_2526 SM00387 Histidine kinase-like ATPases Tharo_2526 SM00388 His Kinase A (phosphoacceptor) domain Tharo_2527 SM00382 ATPases associated with a variety of cellular activities Tharo_2529 SM00448 cheY-homologous receiver domain Tharo_2533 SM00073 Histidine Phosphotransfer domain Tharo_2533 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_2533 SM00387 Histidine kinase-like ATPases Tharo_2537 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Tharo_2540 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tharo_2540 SM00895 Tharo_2540 Tharo_2548 SM01092 CO dehydrogenase flavoprotein C-terminal domain Tharo_2550 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Tharo_2554 SM00852 Probable molybdopterin binding domain Tharo_2556 SM00382 ATPases associated with a variety of cellular activities Tharo_2566 SM00867 YceI-like domain Tharo_2567 SM00867 YceI-like domain Tharo_2577 SM01126 Tharo_2577 Tharo_2583 SM00487 DEAD-like helicases superfamily Tharo_2583 SM00490 helicase superfamily c-terminal domain Tharo_2586 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Tharo_2586 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Tharo_2587 SM00331 Sigma factor PP2C-like phosphatases Tharo_2587 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Tharo_2596 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Tharo_2598 SM00829 Enoylreductase Tharo_2599 SM00382 ATPases associated with a variety of cellular activities Tharo_2607 SM00090 RIO-like kinase Tharo_2610 SM00382 ATPases associated with a variety of cellular activities Tharo_2611 SM00479 Tharo_2611 Tharo_2611 SM00487 DEAD-like helicases superfamily Tharo_2611 SM00490 helicase superfamily c-terminal domain Tharo_2622 SM01001 AIR carboxylase Tharo_2624 SM01091 Transporter associated domain Tharo_2625 SM00421 helix_turn_helix, Lux Regulon Tharo_2625 SM00448 cheY-homologous receiver domain Tharo_2626 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_2626 SM00091 PAS domain Tharo_2626 SM00387 Histidine kinase-like ATPases Tharo_2626 SM00388 His Kinase A (phosphoacceptor) domain Tharo_2626 SM01079 Tharo_2626 Tharo_2634 SM01211 Tharo_2634 Tharo_2647 SM00493 Tharo_2647 Tharo_2659 SM00411 bacterial (prokaryotic) histone like domain Tharo_2660 SM00382 ATPases associated with a variety of cellular activities Tharo_2660 SM00464 Found in ATP-dependent protease La (LON) Tharo_2661 SM00382 ATPases associated with a variety of cellular activities Tharo_2661 SM00994 ClpX C4-type zinc finger Tharo_2661 SM01086 C-terminal, D2-small domain, of ClpB protein Tharo_2664 SM00763 PrkA AAA domain Tharo_2677 SM01007 Class II Aldolase and Adducin N-terminal domain Tharo_2693 SM00849 Metallo-beta-lactamase superfamily Tharo_2696 SM00382 ATPases associated with a variety of cellular activities Tharo_2699 SM00662 RNA polymerases D Tharo_2700 SM00363 S4 RNA-binding domain Tharo_2700 SM01390 Tharo_2700 Tharo_2703 SM00316 Ribosomal protein S1-like RNA-binding domain Tharo_2713 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Tharo_2714 SM01374 Tharo_2714 Tharo_2718 SM00322 K homology RNA-binding domain Tharo_2721 SM01382 Tharo_2721 Tharo_2721 SM01383 Tharo_2721 Tharo_2725 SM01403 Tharo_2725 Tharo_2727 SM00838 Elongation factor G C-terminus Tharo_2727 SM00889 Elongation factor G, domain IV Tharo_2730 SM00663 RNA polymerase I subunit A N-terminus Tharo_2735 SM00649 Ribosomal protein L11/L12 Tharo_2736 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Tharo_2736 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Tharo_2744 SM00421 helix_turn_helix, Lux Regulon Tharo_2744 SM00448 cheY-homologous receiver domain Tharo_2746 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_2746 SM00387 Histidine kinase-like ATPases Tharo_2746 SM00388 His Kinase A (phosphoacceptor) domain Tharo_2746 SM00448 cheY-homologous receiver domain Tharo_2748 SM00028 Tetratricopeptide repeats Tharo_2758 SM00858 Tharo_2758 Tharo_2759 SM00382 ATPases associated with a variety of cellular activities Tharo_2763 SM00448 cheY-homologous receiver domain Tharo_2766 SM00421 helix_turn_helix, Lux Regulon Tharo_2766 SM00448 cheY-homologous receiver domain Tharo_2773 SM00382 ATPases associated with a variety of cellular activities Tharo_2773 SM00989 Tharo_2773 Tharo_2776 SM00116 Domain in cystathionine beta-synthase and other proteins. Tharo_2792 SM00878 Biotin carboxylase C-terminal domain Tharo_2796 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tharo_2796 SM00895 Tharo_2796 Tharo_2797 SM01091 Transporter associated domain Tharo_2801 SM00052 Putative diguanylate phosphodiesterase Tharo_2801 SM00267 diguanylate cyclase Tharo_2801 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_2804 SM00421 helix_turn_helix, Lux Regulon Tharo_2806 SM00382 ATPases associated with a variety of cellular activities Tharo_2809 SM00382 ATPases associated with a variety of cellular activities Tharo_2812 SM00382 ATPases associated with a variety of cellular activities Tharo_2818 SM00387 Histidine kinase-like ATPases Tharo_2818 SM00388 His Kinase A (phosphoacceptor) domain Tharo_2819 SM00448 cheY-homologous receiver domain Tharo_2819 SM00862 Transcriptional regulatory protein, C terminal Tharo_2820 SM00421 helix_turn_helix, Lux Regulon Tharo_2831 SM00052 Putative diguanylate phosphodiesterase Tharo_2831 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_2831 SM00091 PAS domain Tharo_2831 SM00267 diguanylate cyclase Tharo_2831 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_2842 SM00382 ATPases associated with a variety of cellular activities Tharo_2848 SM00965 Secretin and TonB N terminus short domain Tharo_2862 SM00244 prohibitin homologues Tharo_2865 SM00267 diguanylate cyclase Tharo_2870 SM00671 Sel1-like repeats. Tharo_2872 SM00382 ATPases associated with a variety of cellular activities Tharo_2872 SM01086 C-terminal, D2-small domain, of ClpB protein Tharo_2888 SM00382 ATPases associated with a variety of cellular activities Tharo_2893 SM00530 Helix-turn-helix XRE-family like proteins Tharo_2894 SM00530 Helix-turn-helix XRE-family like proteins Tharo_2895 SM00530 Helix-turn-helix XRE-family like proteins Tharo_2903 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_2903 SM00091 PAS domain Tharo_2903 SM00387 Histidine kinase-like ATPases Tharo_2903 SM00388 His Kinase A (phosphoacceptor) domain Tharo_2903 SM00989 Tharo_2903 Tharo_2904 SM00382 ATPases associated with a variety of cellular activities Tharo_2904 SM00448 cheY-homologous receiver domain Tharo_2915 SM00382 ATPases associated with a variety of cellular activities Tharo_2915 SM00989 Tharo_2915 Tharo_2919 SM00878 Biotin carboxylase C-terminal domain Tharo_2927 SM00829 Enoylreductase Tharo_2932 SM00382 ATPases associated with a variety of cellular activities Tharo_2933 SM00849 Metallo-beta-lactamase superfamily Tharo_2939 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Tharo_2944 SM00878 Biotin carboxylase C-terminal domain Tharo_2949 SM00849 Metallo-beta-lactamase superfamily Tharo_2956 SM00836 DALR anticodon binding domain Tharo_2956 SM01016 Arginyl tRNA synthetase N terminal dom Tharo_2966 SM00382 ATPases associated with a variety of cellular activities Tharo_2968 SM00382 ATPases associated with a variety of cellular activities Tharo_2978 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tharo_2981 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tharo_2992 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_2992 SM00091 PAS domain Tharo_2992 SM00267 diguanylate cyclase Tharo_2993 SM00052 Putative diguanylate phosphodiesterase Tharo_2993 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_2993 SM00091 PAS domain Tharo_2993 SM00267 diguanylate cyclase Tharo_2993 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_2993 SM00448 cheY-homologous receiver domain Tharo_3005 SM00342 helix_turn_helix, arabinose operon control protein Tharo_3010 SM00849 Metallo-beta-lactamase superfamily Tharo_3011 SM00346 helix_turn_helix isocitrate lyase regulation Tharo_3012 SM00052 Putative diguanylate phosphodiesterase Tharo_3012 SM00267 diguanylate cyclase Tharo_3013 SM00052 Putative diguanylate phosphodiesterase Tharo_3013 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_3013 SM00091 PAS domain Tharo_3013 SM00267 diguanylate cyclase Tharo_3017 SM01126 Tharo_3017 Tharo_3018 SM00487 DEAD-like helicases superfamily Tharo_3027 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_3027 SM00331 Sigma factor PP2C-like phosphatases Tharo_3030 SM00267 diguanylate cyclase Tharo_3032 SM00881 CoA binding domain Tharo_3035 SM00267 diguanylate cyclase Tharo_3050 SM00052 Putative diguanylate phosphodiesterase Tharo_3050 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Tharo_3050 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_3050 SM00267 diguanylate cyclase Tharo_3051 SM00052 Putative diguanylate phosphodiesterase Tharo_3051 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_3051 SM00091 PAS domain Tharo_3051 SM00387 Histidine kinase-like ATPases Tharo_3051 SM00388 His Kinase A (phosphoacceptor) domain Tharo_3051 SM00448 cheY-homologous receiver domain Tharo_3051 SM01079 Tharo_3051 Tharo_3054 SM01400 Tharo_3054 Tharo_3055 SM00506 Appr-1"-p processing enzyme Tharo_3058 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Tharo_3058 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Tharo_3059 SM00893 Electron transfer flavoprotein domain Tharo_3060 SM00893 Electron transfer flavoprotein domain Tharo_3066 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_3066 SM00091 PAS domain Tharo_3066 SM00387 Histidine kinase-like ATPases Tharo_3067 SM00421 helix_turn_helix, Lux Regulon Tharo_3067 SM00448 cheY-homologous receiver domain Tharo_3092 SM01018 B12 binding domain Tharo_3098 SM00382 ATPases associated with a variety of cellular activities Tharo_3099 SM00382 ATPases associated with a variety of cellular activities Tharo_3101 SM00382 ATPases associated with a variety of cellular activities Tharo_3104 SM00938 Nitrogen regulatory protein P-II Tharo_3115 SM00887 Ethylbenzene dehydrogenase Tharo_3116 SM00382 ATPases associated with a variety of cellular activities Tharo_3116 SM00448 cheY-homologous receiver domain Tharo_3117 SM00387 Histidine kinase-like ATPases Tharo_3117 SM00388 His Kinase A (phosphoacceptor) domain Tharo_3119 SM00382 ATPases associated with a variety of cellular activities Tharo_3129 SM01116 Tharo_3129 Tharo_3133 SM00382 ATPases associated with a variety of cellular activities Tharo_3135 SM01321 Tharo_3135 Tharo_3139 SM00563 Phosphate acyltransferases Tharo_3145 SM01080 Tharo_3145 Tharo_3154 SM00382 ATPases associated with a variety of cellular activities Tharo_3157 SM00822 Tharo_3157 Tharo_3159 SM00382 ATPases associated with a variety of cellular activities Tharo_3167 SM00487 DEAD-like helicases superfamily Tharo_3175 SM00052 Putative diguanylate phosphodiesterase Tharo_3175 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tharo_3175 SM00091 PAS domain Tharo_3175 SM00267 diguanylate cyclase Tharo_3177 SM00833 Cobalamin synthesis protein cobW C-terminal domain Tharo_3178 SM00052 Putative diguanylate phosphodiesterase Tharo_3183 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Tharo_3183 SM00474 3'-5' exonuclease Tharo_3183 SM00475 5'-3' exonuclease Tharo_3183 SM00482 DNA polymerase A domain Tharo_3186 SM00986 Uracil DNA glycosylase superfamily Tharo_3186 SM00987 UreE urease accessory protein, C-terminal domain Tharo_3194 SM00316 Ribosomal protein S1-like RNA-binding domain Tharo_3195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tharo_3195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_3195 SM01049 Tharo_3195 Tharo_3196 SM01049 Tharo_3196 Tharo_3198 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Tharo_3199 SM00382 ATPases associated with a variety of cellular activities Tharo_3219 SM00382 ATPases associated with a variety of cellular activities Tharo_3242 SM00855 Phosphoglycerate mutase family Tharo_3255 SM00448 cheY-homologous receiver domain Tharo_3255 SM00862 Transcriptional regulatory protein, C terminal Tharo_3256 SM00387 Histidine kinase-like ATPases Tharo_3256 SM00388 His Kinase A (phosphoacceptor) domain Tharo_3260 SM00382 ATPases associated with a variety of cellular activities Tharo_3269 SM00530 Helix-turn-helix XRE-family like proteins Tharo_3289 SM00487 DEAD-like helicases superfamily Tharo_3289 SM00490 helicase superfamily c-terminal domain Tharo_3290 SM00411 bacterial (prokaryotic) histone like domain Tharo_3292 SM00903 Flavin reductase like domain Tharo_3293 SM00478 endonuclease III Tharo_3297 SM00382 ATPases associated with a variety of cellular activities Tharo_3301 SM00849 Metallo-beta-lactamase superfamily Tharo_3302 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Tharo_3312 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tharo_3318 SM00220 Serine/Threonine protein kinases, catalytic domain Tharo_3321 SM00729 Elongator protein 3, MiaB family, Radical SAM Tharo_3323 SM00564 beta-propeller repeat Tharo_3328 SM00864 Tubulin/FtsZ family, GTPase domain Tharo_3343 SM00382 ATPases associated with a variety of cellular activities Tharo_3350 SM00387 Histidine kinase-like ATPases Tharo_3350 SM00388 His Kinase A (phosphoacceptor) domain Tharo_3351 SM00448 cheY-homologous receiver domain Tharo_3351 SM00862 Transcriptional regulatory protein, C terminal Tharo_3353 SM00822 Tharo_3353 Tharo_3354 SM01236 Tharo_3354 Tharo_3359 SM00387 Histidine kinase-like ATPases Tharo_3360 SM00448 cheY-homologous receiver domain Tharo_3360 SM00862 Transcriptional regulatory protein, C terminal Tharo_3363 SM00382 ATPases associated with a variety of cellular activities Tharo_3364 SM00382 ATPases associated with a variety of cellular activities Tharo_3377 SM00448 cheY-homologous receiver domain Tharo_3377 SM00862 Transcriptional regulatory protein, C terminal Tharo_3378 SM00387 Histidine kinase-like ATPases Tharo_3378 SM00388 His Kinase A (phosphoacceptor) domain Tharo_3380 SM00947 Carbonic anhydrase Tharo_3383 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tharo_3384 SM00487 DEAD-like helicases superfamily Tharo_3384 SM00490 helicase superfamily c-terminal domain Tharo_3389 SM00448 cheY-homologous receiver domain Tharo_3390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tharo_3390 SM00387 Histidine kinase-like ATPases Tharo_3390 SM00388 His Kinase A (phosphoacceptor) domain Tharo_3396 SM00487 DEAD-like helicases superfamily Tharo_3402 SM01234 Tharo_3402 Tharo_3412 SM00382 ATPases associated with a variety of cellular activities Tharo_3431 SM00966 SpoVT / AbrB like domain Tharo_3432 SM00857 Resolvase, N terminal domain Tharo_3441 SM00382 ATPases associated with a variety of cellular activities Tharo_3447 SM00493 Tharo_3447 Tharo_3449 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Tharo_3449 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Tharo_3449 SM00493 Tharo_3449 Tharo_3460 SM00470 ParB-like nuclease domain