Tchl_0001 SM00382 ATPases associated with a variety of cellular activities Tchl_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain Tchl_0002 SM00480 DNA polymerase III beta subunit Tchl_0003 SM00387 Histidine kinase-like ATPases Tchl_0003 SM00433 TopoisomeraseII Tchl_0012 SM00487 DEAD-like helicases superfamily Tchl_0029 SM00849 Metallo-beta-lactamase superfamily Tchl_0034 SM00729 Elongator protein 3, MiaB family, Radical SAM Tchl_0038 SM00382 ATPases associated with a variety of cellular activities Tchl_0047 SM00244 prohibitin homologues Tchl_0054 SM00841 Elongation factor P, C-terminal Tchl_0054 SM01185 Tchl_0054 Tchl_0067 SM00382 ATPases associated with a variety of cellular activities Tchl_0070 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tchl_0073 SM00344 helix_turn_helix ASNC type Tchl_0075 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Tchl_0075 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Tchl_0075 SM00493 Tchl_0075 Tchl_0078 SM00257 Lysin motif Tchl_0083 SM00729 Elongator protein 3, MiaB family, Radical SAM Tchl_0084 SM00769 Water Stress and Hypersensitive response Tchl_0086 SM00382 ATPases associated with a variety of cellular activities Tchl_0091 SM00347 helix_turn_helix multiple antibiotic resistance protein Tchl_0097 SM00917 LeuA allosteric (dimerisation) domain Tchl_0098 SM00344 helix_turn_helix ASNC type Tchl_0112 SM01228 Tchl_0112 Tchl_0115 SM00470 ParB-like nuclease domain Tchl_0125 SM00382 ATPases associated with a variety of cellular activities Tchl_0128 SM00978 Tchl_0128 Tchl_0131 SM00448 cheY-homologous receiver domain Tchl_0131 SM00862 Transcriptional regulatory protein, C terminal Tchl_0132 SM00387 Histidine kinase-like ATPases Tchl_0132 SM00388 His Kinase A (phosphoacceptor) domain Tchl_0141 SM00845 GatB domain Tchl_0150 SM00936 Penicillin-binding protein 5, C-terminal domain Tchl_0154 SM00729 Elongator protein 3, MiaB family, Radical SAM Tchl_0162 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tchl_0166 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_0166 SM00387 Histidine kinase-like ATPases Tchl_0166 SM00388 His Kinase A (phosphoacceptor) domain Tchl_0167 SM00448 cheY-homologous receiver domain Tchl_0167 SM00862 Transcriptional regulatory protein, C terminal Tchl_0179 SM00746 metallochaperone-like domain Tchl_0191 SM00831 Cation transporter/ATPase, N-terminus Tchl_0219 SM00966 SpoVT / AbrB like domain Tchl_0226 SM00849 Metallo-beta-lactamase superfamily Tchl_0240 SM00897 FIST N domain Tchl_0240 SM01204 Tchl_0240 Tchl_0241 SM00072 Guanylate kinase homologues. Tchl_0242 SM01409 Tchl_0242 Tchl_0243 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tchl_0243 SM00954 Region found in RelA / SpoT proteins Tchl_0245 SM00479 Tchl_0245 Tchl_0246 SM00100 Cyclic nucleotide-monophosphate binding domain Tchl_0246 SM00419 helix_turn_helix, cAMP Regulatory protein Tchl_0247 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_0247 SM00387 Histidine kinase-like ATPases Tchl_0248 SM00421 helix_turn_helix, Lux Regulon Tchl_0248 SM00448 cheY-homologous receiver domain Tchl_0249 SM00382 ATPases associated with a variety of cellular activities Tchl_0258 SM01005 Alanine racemase, C-terminal domain Tchl_0261 SM00530 Helix-turn-helix XRE-family like proteins Tchl_0274 SM00411 bacterial (prokaryotic) histone like domain Tchl_0297 SM00382 ATPases associated with a variety of cellular activities Tchl_0328 SM00966 SpoVT / AbrB like domain Tchl_0337 SM00487 DEAD-like helicases superfamily Tchl_0337 SM00490 helicase superfamily c-terminal domain Tchl_0344 SM00530 Helix-turn-helix XRE-family like proteins Tchl_0352 SM00100 Cyclic nucleotide-monophosphate binding domain Tchl_0352 SM00116 Domain in cystathionine beta-synthase and other proteins. Tchl_0353 SM00479 Tchl_0353 Tchl_0356 SM00858 Tchl_0356 Tchl_0365 SM00047 Lysozyme subfamily 2 Tchl_0378 SM00382 ATPases associated with a variety of cellular activities Tchl_0384 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tchl_0404 SM00028 Tetratricopeptide repeats Tchl_0406 SM00984 UDP binding domain Tchl_0410 SM00530 Helix-turn-helix XRE-family like proteins Tchl_0425 SM00073 Histidine Phosphotransfer domain Tchl_0425 SM00260 Two component signalling adaptor domain Tchl_0425 SM00387 Histidine kinase-like ATPases Tchl_0425 SM01231 Tchl_0425 Tchl_0426 SM00260 Two component signalling adaptor domain Tchl_0427 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tchl_0427 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_0428 SM00138 Methyltransferase, chemotaxis proteins Tchl_0429 SM00448 cheY-homologous receiver domain Tchl_0430 SM00448 cheY-homologous receiver domain Tchl_0434 SM00382 ATPases associated with a variety of cellular activities Tchl_0434 SM00962 SRP54-type protein, GTPase domain Tchl_0438 SM00382 ATPases associated with a variety of cellular activities Tchl_0439 SM00062 Bacterial periplasmic substrate-binding proteins Tchl_0439 SM00267 diguanylate cyclase Tchl_0445 SM00487 DEAD-like helicases superfamily Tchl_0445 SM00490 helicase superfamily c-terminal domain Tchl_0448 SM00530 Helix-turn-helix XRE-family like proteins Tchl_0458 SM00382 ATPases associated with a variety of cellular activities Tchl_0460 SM00363 S4 RNA-binding domain Tchl_0461 SM00996 S-adenosyl-L-homocysteine hydrolase Tchl_0461 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Tchl_0463 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tchl_0463 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_0464 SM00487 DEAD-like helicases superfamily Tchl_0464 SM00490 helicase superfamily c-terminal domain Tchl_0476 SM00382 ATPases associated with a variety of cellular activities Tchl_0476 SM00448 cheY-homologous receiver domain Tchl_0477 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_0477 SM00387 Histidine kinase-like ATPases Tchl_0477 SM00388 His Kinase A (phosphoacceptor) domain Tchl_0487 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Tchl_0491 SM00981 Tchl_0491 Tchl_0493 SM00382 ATPases associated with a variety of cellular activities Tchl_0500 SM00732 Likely ribonuclease with RNase H fold. Tchl_0509 SM00116 Domain in cystathionine beta-synthase and other proteins. Tchl_0509 SM00924 MgtE intracellular N domain Tchl_0513 SM00955 Tchl_0513 Tchl_0518 SM00382 ATPases associated with a variety of cellular activities Tchl_0518 SM00487 DEAD-like helicases superfamily Tchl_0518 SM00490 helicase superfamily c-terminal domain Tchl_0518 SM00847 Helicase associated domain (HA2) Add an annotation Tchl_0525 SM00382 ATPases associated with a variety of cellular activities Tchl_0533 SM00925 MltA specific insert domain Tchl_0535 SM00382 ATPases associated with a variety of cellular activities Tchl_0544 SM00382 ATPases associated with a variety of cellular activities Tchl_0544 SM00448 cheY-homologous receiver domain Tchl_0545 SM00387 Histidine kinase-like ATPases Tchl_0545 SM00388 His Kinase A (phosphoacceptor) domain Tchl_0547 SM01230 Tchl_0547 Tchl_0549 SM00450 Rhodanese Homology Domain Tchl_0552 SM00155 Phospholipase D. Active site motifs. Tchl_0553 SM00881 CoA binding domain Tchl_0561 SM00382 ATPases associated with a variety of cellular activities Tchl_0562 SM00710 Parallel beta-helix repeats Tchl_0562 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses Tchl_0564 SM00900 Tchl_0564 Tchl_0566 SM00387 Histidine kinase-like ATPases Tchl_0567 SM00448 cheY-homologous receiver domain Tchl_0568 SM00267 diguanylate cyclase Tchl_0572 SM01400 Tchl_0572 Tchl_0576 SM00028 Tetratricopeptide repeats Tchl_0577 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Tchl_0577 SM01232 Tchl_0577 Tchl_0583 SM00382 ATPases associated with a variety of cellular activities Tchl_0583 SM00962 SRP54-type protein, GTPase domain Tchl_0583 SM00963 SRP54-type protein, helical bundle domain Tchl_0584 SM00382 ATPases associated with a variety of cellular activities Tchl_0588 SM00382 ATPases associated with a variety of cellular activities Tchl_0591 SM00849 Metallo-beta-lactamase superfamily Tchl_0593 SM00530 Helix-turn-helix XRE-family like proteins Tchl_0599 SM00729 Elongator protein 3, MiaB family, Radical SAM Tchl_0602 SM01091 Transporter associated domain Tchl_0607 SM00563 Phosphate acyltransferases Tchl_0612 SM00116 Domain in cystathionine beta-synthase and other proteins. Tchl_0618 SM00382 ATPases associated with a variety of cellular activities Tchl_0620 SM00382 ATPases associated with a variety of cellular activities Tchl_0626 SM00382 ATPases associated with a variety of cellular activities Tchl_0644 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tchl_0649 SM00881 CoA binding domain Tchl_0650 SM00240 Forkhead associated domain Tchl_0651 SM00849 Metallo-beta-lactamase superfamily Tchl_0652 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Tchl_0652 SM00382 ATPases associated with a variety of cellular activities Tchl_0662 SM00341 Helicase and RNase D C-terminal Tchl_0662 SM00487 DEAD-like helicases superfamily Tchl_0662 SM00490 helicase superfamily c-terminal domain Tchl_0662 SM00956 Tchl_0662 Tchl_0689 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain Tchl_0690 SM01400 Tchl_0690 Tchl_0691 SM00240 Forkhead associated domain Tchl_0694 SM00052 Putative diguanylate phosphodiesterase Tchl_0694 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_0694 SM00091 PAS domain Tchl_0694 SM00267 diguanylate cyclase Tchl_0704 SM00870 Tchl_0704 Tchl_0706 SM00382 ATPases associated with a variety of cellular activities Tchl_0714 SM00900 Tchl_0714 Tchl_0720 SM00487 DEAD-like helicases superfamily Tchl_0720 SM00490 helicase superfamily c-terminal domain Tchl_0724 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Tchl_0730 SM00563 Phosphate acyltransferases Tchl_0732 SM00822 Tchl_0732 Tchl_0735 SM00825 Beta-ketoacyl synthase Tchl_0745 SM00825 Beta-ketoacyl synthase Tchl_0749 SM01219 Tchl_0749 Tchl_0751 SM00842 Cell division protein FtsA Tchl_0755 SM00965 Secretin and TonB N terminus short domain Tchl_0758 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tchl_0774 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_0774 SM00387 Histidine kinase-like ATPases Tchl_0774 SM00388 His Kinase A (phosphoacceptor) domain Tchl_0775 SM00448 cheY-homologous receiver domain Tchl_0775 SM00862 Transcriptional regulatory protein, C terminal Tchl_0785 SM00829 Enoylreductase Tchl_0790 SM00644 Tchl_0790 Tchl_0793 SM00919 Malic enzyme, NAD binding domain Tchl_0793 SM01274 Tchl_0793 Tchl_0797 SM00346 helix_turn_helix isocitrate lyase regulation Tchl_0805 SM00091 PAS domain Tchl_0805 SM00267 diguanylate cyclase Tchl_0807 SM00363 S4 RNA-binding domain Tchl_0815 SM00487 DEAD-like helicases superfamily Tchl_0826 SM00382 ATPases associated with a variety of cellular activities Tchl_0832 SM00487 DEAD-like helicases superfamily Tchl_0832 SM00490 helicase superfamily c-terminal domain Tchl_0836 SM00450 Rhodanese Homology Domain Tchl_0843 SM00563 Phosphate acyltransferases Tchl_0848 SM00878 Biotin carboxylase C-terminal domain Tchl_0853 SM00749 bacterial OsmY and nodulation domain Tchl_0858 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tchl_0858 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_0872 SM00842 Cell division protein FtsA Tchl_0873 SM00864 Tubulin/FtsZ family, GTPase domain Tchl_0873 SM00865 Tubulin/FtsZ family, C-terminal domain Tchl_0896 SM00858 Tchl_0896 Tchl_0912 SM00530 Helix-turn-helix XRE-family like proteins Tchl_0917 SM00957 SecA DEAD-like domain Tchl_0917 SM00958 SecA preprotein cross-linking domain Tchl_0920 SM00267 diguanylate cyclase Tchl_0920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_0926 SM01323 Tchl_0926 Tchl_0935 SM00885 D5 N terminal like Tchl_0943 SM00977 TilS substrate C-terminal domain Tchl_0944 SM00421 helix_turn_helix, Lux Regulon Tchl_0944 SM00448 cheY-homologous receiver domain Tchl_0945 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_0945 SM00091 PAS domain Tchl_0945 SM00387 Histidine kinase-like ATPases Tchl_0945 SM00388 His Kinase A (phosphoacceptor) domain Tchl_0949 SM00562 Tchl_0949 Tchl_0951 SM00028 Tetratricopeptide repeats Tchl_0956 SM00564 beta-propeller repeat Tchl_0957 SM00382 ATPases associated with a variety of cellular activities Tchl_0960 SM00244 prohibitin homologues Tchl_0961 SM00244 prohibitin homologues Tchl_0964 SM00788 Adenylosuccinate synthetase Tchl_0967 SM00316 Ribosomal protein S1-like RNA-binding domain Tchl_0967 SM00357 Cold shock protein domain Tchl_0967 SM00955 Tchl_0967 Tchl_0968 SM00967 RNA 2'-O ribose methyltransferase substrate binding Tchl_0973 SM00220 Serine/Threonine protein kinases, catalytic domain Tchl_0973 SM00331 Sigma factor PP2C-like phosphatases Tchl_0973 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Tchl_0974 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Tchl_0975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tchl_0976 SM00448 cheY-homologous receiver domain Tchl_0977 SM00028 Tetratricopeptide repeats Tchl_0977 SM00138 Methyltransferase, chemotaxis proteins Tchl_0978 SM00073 Histidine Phosphotransfer domain Tchl_0978 SM00260 Two component signalling adaptor domain Tchl_0978 SM00387 Histidine kinase-like ATPases Tchl_0978 SM00448 cheY-homologous receiver domain Tchl_0978 SM01231 Tchl_0978 Tchl_0979 SM00448 cheY-homologous receiver domain Tchl_0980 SM00267 diguanylate cyclase Tchl_0980 SM00448 cheY-homologous receiver domain Tchl_0981 SM00260 Two component signalling adaptor domain Tchl_0983 SM00267 diguanylate cyclase Tchl_0983 SM01079 Tchl_0983 Tchl_0989 SM00382 ATPases associated with a variety of cellular activities Tchl_0991 SM00493 Tchl_0991 Tchl_1009 SM00861 Transketolase, pyrimidine binding domain Tchl_1015 SM00883 Chaperonin 10 Kd subunit Tchl_1017 SM00448 cheY-homologous receiver domain Tchl_1017 SM00862 Transcriptional regulatory protein, C terminal Tchl_1018 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_1018 SM00387 Histidine kinase-like ATPases Tchl_1018 SM00388 His Kinase A (phosphoacceptor) domain Tchl_1022 SM00937 Tchl_1022 Tchl_1026 SM00834 Putative regulatory protein Tchl_1030 SM01091 Transporter associated domain Tchl_1032 SM00382 ATPases associated with a variety of cellular activities Tchl_1032 SM00962 SRP54-type protein, GTPase domain Tchl_1032 SM00963 SRP54-type protein, helical bundle domain Tchl_1034 SM00852 Probable molybdopterin binding domain Tchl_1037 SM00448 cheY-homologous receiver domain Tchl_1037 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tchl_1044 SM00853 MutL C terminal dimerisation domain Tchl_1044 SM01340 Tchl_1044 Tchl_1084 SM00822 Tchl_1084 Tchl_1091 SM00347 helix_turn_helix multiple antibiotic resistance protein Tchl_1095 SM00965 Secretin and TonB N terminus short domain Tchl_1098 SM00342 helix_turn_helix, arabinose operon control protein Tchl_1100 SM00530 Helix-turn-helix XRE-family like proteins Tchl_1111 SM00382 ATPases associated with a variety of cellular activities Tchl_1112 SM00382 ATPases associated with a variety of cellular activities Tchl_1115 SM00448 cheY-homologous receiver domain Tchl_1115 SM00862 Transcriptional regulatory protein, C terminal Tchl_1116 SM00387 Histidine kinase-like ATPases Tchl_1122 SM01236 Tchl_1122 Tchl_1123 SM00822 Tchl_1123 Tchl_1125 SM00448 cheY-homologous receiver domain Tchl_1125 SM00862 Transcriptional regulatory protein, C terminal Tchl_1126 SM00387 Histidine kinase-like ATPases Tchl_1126 SM00388 His Kinase A (phosphoacceptor) domain Tchl_1133 SM00382 ATPases associated with a variety of cellular activities Tchl_1148 SM00965 Secretin and TonB N terminus short domain Tchl_1151 SM00729 Elongator protein 3, MiaB family, Radical SAM Tchl_1154 SM00220 Serine/Threonine protein kinases, catalytic domain Tchl_1169 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Tchl_1170 SM00849 Metallo-beta-lactamase superfamily Tchl_1174 SM00382 ATPases associated with a variety of cellular activities Tchl_1178 SM00478 endonuclease III Tchl_1179 SM00903 Flavin reductase like domain Tchl_1181 SM00411 bacterial (prokaryotic) histone like domain Tchl_1182 SM00487 DEAD-like helicases superfamily Tchl_1182 SM00490 helicase superfamily c-terminal domain Tchl_1211 SM00382 ATPases associated with a variety of cellular activities Tchl_1217 SM00387 Histidine kinase-like ATPases Tchl_1217 SM00388 His Kinase A (phosphoacceptor) domain Tchl_1218 SM00448 cheY-homologous receiver domain Tchl_1218 SM00862 Transcriptional regulatory protein, C terminal Tchl_1230 SM00855 Phosphoglycerate mutase family Tchl_1244 SM00382 ATPases associated with a variety of cellular activities Tchl_1264 SM00382 ATPases associated with a variety of cellular activities Tchl_1265 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Tchl_1267 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tchl_1267 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_1267 SM01049 Tchl_1267 Tchl_1268 SM00316 Ribosomal protein S1-like RNA-binding domain Tchl_1276 SM00986 Uracil DNA glycosylase superfamily Tchl_1276 SM00987 UreE urease accessory protein, C-terminal domain Tchl_1279 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Tchl_1279 SM00474 3'-5' exonuclease Tchl_1279 SM00475 5'-3' exonuclease Tchl_1279 SM00482 DNA polymerase A domain Tchl_1284 SM00052 Putative diguanylate phosphodiesterase Tchl_1285 SM00833 Cobalamin synthesis protein cobW C-terminal domain Tchl_1287 SM00052 Putative diguanylate phosphodiesterase Tchl_1287 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_1287 SM00091 PAS domain Tchl_1287 SM00267 diguanylate cyclase Tchl_1298 SM00849 Metallo-beta-lactamase superfamily Tchl_1298 SM01027 Beta-Casp domain Tchl_1306 SM00382 ATPases associated with a variety of cellular activities Tchl_1316 SM00382 ATPases associated with a variety of cellular activities Tchl_1318 SM00822 Tchl_1318 Tchl_1321 SM00382 ATPases associated with a variety of cellular activities Tchl_1326 SM00342 helix_turn_helix, arabinose operon control protein Tchl_1332 SM00965 Secretin and TonB N terminus short domain Tchl_1339 SM00563 Phosphate acyltransferases Tchl_1353 SM00382 ATPases associated with a variety of cellular activities Tchl_1358 SM00387 Histidine kinase-like ATPases Tchl_1358 SM00388 His Kinase A (phosphoacceptor) domain Tchl_1359 SM00382 ATPases associated with a variety of cellular activities Tchl_1359 SM00448 cheY-homologous receiver domain Tchl_1360 SM00887 Ethylbenzene dehydrogenase Tchl_1368 SM00938 Nitrogen regulatory protein P-II Tchl_1374 SM00382 ATPases associated with a variety of cellular activities Tchl_1376 SM00382 ATPases associated with a variety of cellular activities Tchl_1377 SM00382 ATPases associated with a variety of cellular activities Tchl_1383 SM01018 B12 binding domain Tchl_1410 SM00421 helix_turn_helix, Lux Regulon Tchl_1410 SM00448 cheY-homologous receiver domain Tchl_1411 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_1411 SM00091 PAS domain Tchl_1411 SM00387 Histidine kinase-like ATPases Tchl_1417 SM00893 Electron transfer flavoprotein domain Tchl_1418 SM00893 Electron transfer flavoprotein domain Tchl_1419 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Tchl_1419 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Tchl_1422 SM00506 Appr-1"-p processing enzyme Tchl_1423 SM01400 Tchl_1423 Tchl_1426 SM00052 Putative diguanylate phosphodiesterase Tchl_1426 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_1426 SM00091 PAS domain Tchl_1426 SM00387 Histidine kinase-like ATPases Tchl_1426 SM00388 His Kinase A (phosphoacceptor) domain Tchl_1426 SM00448 cheY-homologous receiver domain Tchl_1426 SM01079 Tchl_1426 Tchl_1427 SM00052 Putative diguanylate phosphodiesterase Tchl_1427 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Tchl_1427 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_1427 SM00267 diguanylate cyclase Tchl_1444 SM00881 CoA binding domain Tchl_1446 SM00267 diguanylate cyclase Tchl_1449 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_1449 SM00331 Sigma factor PP2C-like phosphatases Tchl_1459 SM00487 DEAD-like helicases superfamily Tchl_1474 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Tchl_1478 SM00833 Cobalamin synthesis protein cobW C-terminal domain Tchl_1479 SM00861 Transketolase, pyrimidine binding domain Tchl_1483 SM00829 Enoylreductase Tchl_1487 SM00052 Putative diguanylate phosphodiesterase Tchl_1487 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_1487 SM00091 PAS domain Tchl_1487 SM00267 diguanylate cyclase Tchl_1488 SM00052 Putative diguanylate phosphodiesterase Tchl_1488 SM00267 diguanylate cyclase Tchl_1489 SM00346 helix_turn_helix isocitrate lyase regulation Tchl_1490 SM00849 Metallo-beta-lactamase superfamily Tchl_1495 SM00342 helix_turn_helix, arabinose operon control protein Tchl_1507 SM00052 Putative diguanylate phosphodiesterase Tchl_1507 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_1507 SM00267 diguanylate cyclase Tchl_1507 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_1507 SM00448 cheY-homologous receiver domain Tchl_1508 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_1508 SM00091 PAS domain Tchl_1508 SM00267 diguanylate cyclase Tchl_1519 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tchl_1522 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tchl_1532 SM00382 ATPases associated with a variety of cellular activities Tchl_1534 SM00382 ATPases associated with a variety of cellular activities Tchl_1544 SM00836 DALR anticodon binding domain Tchl_1544 SM01016 Arginyl tRNA synthetase N terminal dom Tchl_1551 SM00849 Metallo-beta-lactamase superfamily Tchl_1559 SM00878 Biotin carboxylase C-terminal domain Tchl_1564 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Tchl_1570 SM00849 Metallo-beta-lactamase superfamily Tchl_1571 SM00382 ATPases associated with a variety of cellular activities Tchl_1576 SM00829 Enoylreductase Tchl_1583 SM00878 Biotin carboxylase C-terminal domain Tchl_1587 SM00382 ATPases associated with a variety of cellular activities Tchl_1587 SM00989 Tchl_1587 Tchl_1599 SM00382 ATPases associated with a variety of cellular activities Tchl_1599 SM00448 cheY-homologous receiver domain Tchl_1600 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_1600 SM00091 PAS domain Tchl_1600 SM00387 Histidine kinase-like ATPases Tchl_1600 SM00388 His Kinase A (phosphoacceptor) domain Tchl_1600 SM00989 Tchl_1600 Tchl_1618 SM00382 ATPases associated with a variety of cellular activities Tchl_1618 SM01086 C-terminal, D2-small domain, of ClpB protein Tchl_1620 SM00671 Sel1-like repeats. Tchl_1624 SM00267 diguanylate cyclase Tchl_1626 SM00244 prohibitin homologues Tchl_1638 SM00965 Secretin and TonB N terminus short domain Tchl_1643 SM00387 Histidine kinase-like ATPases Tchl_1643 SM00388 His Kinase A (phosphoacceptor) domain Tchl_1643 SM00448 cheY-homologous receiver domain Tchl_1644 SM00448 cheY-homologous receiver domain Tchl_1644 SM00862 Transcriptional regulatory protein, C terminal Tchl_1648 SM00382 ATPases associated with a variety of cellular activities Tchl_1659 SM00052 Putative diguanylate phosphodiesterase Tchl_1659 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_1659 SM00091 PAS domain Tchl_1659 SM00267 diguanylate cyclase Tchl_1659 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_1671 SM00421 helix_turn_helix, Lux Regulon Tchl_1672 SM00448 cheY-homologous receiver domain Tchl_1672 SM00862 Transcriptional regulatory protein, C terminal Tchl_1673 SM00387 Histidine kinase-like ATPases Tchl_1673 SM00388 His Kinase A (phosphoacceptor) domain Tchl_1679 SM00382 ATPases associated with a variety of cellular activities Tchl_1683 SM00382 ATPases associated with a variety of cellular activities Tchl_1688 SM00382 ATPases associated with a variety of cellular activities Tchl_1690 SM00421 helix_turn_helix, Lux Regulon Tchl_1693 SM00052 Putative diguanylate phosphodiesterase Tchl_1693 SM00267 diguanylate cyclase Tchl_1693 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_1698 SM01091 Transporter associated domain Tchl_1699 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tchl_1699 SM00895 Tchl_1699 Tchl_1704 SM00878 Biotin carboxylase C-terminal domain Tchl_1713 SM00421 helix_turn_helix, Lux Regulon Tchl_1713 SM00448 cheY-homologous receiver domain Tchl_1715 SM00448 cheY-homologous receiver domain Tchl_1719 SM00382 ATPases associated with a variety of cellular activities Tchl_1720 SM00858 Tchl_1720 Tchl_1725 SM00382 ATPases associated with a variety of cellular activities Tchl_1728 SM00028 Tetratricopeptide repeats Tchl_1730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_1730 SM00387 Histidine kinase-like ATPases Tchl_1730 SM00388 His Kinase A (phosphoacceptor) domain Tchl_1730 SM00448 cheY-homologous receiver domain Tchl_1731 SM00421 helix_turn_helix, Lux Regulon Tchl_1731 SM00448 cheY-homologous receiver domain Tchl_1739 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Tchl_1740 SM00649 Ribosomal protein L11/L12 Tchl_1745 SM00663 RNA polymerase I subunit A N-terminus Tchl_1748 SM00838 Elongation factor G C-terminus Tchl_1748 SM00889 Elongation factor G, domain IV Tchl_1750 SM01403 Tchl_1750 Tchl_1754 SM01382 Tchl_1754 Tchl_1754 SM01383 Tchl_1754 Tchl_1757 SM00322 K homology RNA-binding domain Tchl_1761 SM01374 Tchl_1761 Tchl_1762 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Tchl_1772 SM00316 Ribosomal protein S1-like RNA-binding domain Tchl_1775 SM00363 S4 RNA-binding domain Tchl_1775 SM01390 Tchl_1775 Tchl_1776 SM00662 RNA polymerases D Tchl_1779 SM00382 ATPases associated with a variety of cellular activities Tchl_1782 SM00849 Metallo-beta-lactamase superfamily Tchl_1795 SM00487 DEAD-like helicases superfamily Tchl_1795 SM00490 helicase superfamily c-terminal domain Tchl_1798 SM01101 Tchl_1798 Tchl_1807 SM00382 ATPases associated with a variety of cellular activities Tchl_1808 SM01007 Class II Aldolase and Adducin N-terminal domain Tchl_1814 SM00387 Histidine kinase-like ATPases Tchl_1814 SM00388 His Kinase A (phosphoacceptor) domain Tchl_1815 SM00382 ATPases associated with a variety of cellular activities Tchl_1815 SM00448 cheY-homologous receiver domain Tchl_1835 SM01209 Tchl_1835 Tchl_1835 SM01210 Tchl_1835 Tchl_1836 SM00798 AICARFT/IMPCHase bienzyme Tchl_1836 SM00851 MGS-like domain Tchl_1858 SM00382 ATPases associated with a variety of cellular activities Tchl_1859 SM00829 Enoylreductase Tchl_1861 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Tchl_1870 SM00331 Sigma factor PP2C-like phosphatases Tchl_1870 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Tchl_1871 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Tchl_1871 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Tchl_1874 SM00487 DEAD-like helicases superfamily Tchl_1874 SM00490 helicase superfamily c-terminal domain Tchl_1882 SM00867 YceI-like domain Tchl_1883 SM00867 YceI-like domain Tchl_1885 SM01049 Tchl_1885 Tchl_1896 SM00382 ATPases associated with a variety of cellular activities Tchl_1898 SM00852 Probable molybdopterin binding domain Tchl_1902 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Tchl_1904 SM01092 CO dehydrogenase flavoprotein C-terminal domain Tchl_1912 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tchl_1912 SM00895 Tchl_1912 Tchl_1915 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Tchl_1919 SM00073 Histidine Phosphotransfer domain Tchl_1919 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_1919 SM00387 Histidine kinase-like ATPases Tchl_1922 SM00448 cheY-homologous receiver domain Tchl_1924 SM00382 ATPases associated with a variety of cellular activities Tchl_1925 SM00062 Bacterial periplasmic substrate-binding proteins Tchl_1925 SM00387 Histidine kinase-like ATPases Tchl_1925 SM00388 His Kinase A (phosphoacceptor) domain Tchl_1926 SM00448 cheY-homologous receiver domain Tchl_1927 SM00052 Putative diguanylate phosphodiesterase Tchl_1927 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_1927 SM00091 PAS domain Tchl_1927 SM00267 diguanylate cyclase Tchl_1927 SM00448 cheY-homologous receiver domain Tchl_1955 SM00917 LeuA allosteric (dimerisation) domain Tchl_1961 SM00831 Cation transporter/ATPase, N-terminus Tchl_1965 SM00116 Domain in cystathionine beta-synthase and other proteins. Tchl_1980 SM00974 Tchl_1980 Tchl_1981 SM00507 HNH nucleases Tchl_1991 SM00318 Staphylococcal nuclease homologues Tchl_2002 SM00400 zinc finger Tchl_2002 SM00493 Tchl_2002 Tchl_2002 SM00766 DNA primase DnaG DnaB-binding Tchl_2005 SM01207 Tchl_2005 Tchl_2006 SM00905 Dihydroneopterin aldolase Tchl_2007 SM00528 Domain in histone-like proteins of HNS family Tchl_2018 SM00919 Malic enzyme, NAD binding domain Tchl_2018 SM01274 Tchl_2018 Tchl_2019 SM00829 Enoylreductase Tchl_2020 SM00481 DNA polymerase alpha chain like domain Tchl_2021 SM00650 Ribosomal RNA adenine dimethylases Tchl_2027 SM01011 Aminopeptidase P, N-terminal domain Tchl_2030 SM00419 helix_turn_helix, cAMP Regulatory protein Tchl_2032 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tchl_2033 SM00052 Putative diguanylate phosphodiesterase Tchl_2033 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_2033 SM00267 diguanylate cyclase Tchl_2042 SM00840 Tchl_2042 Tchl_2044 SM00271 DnaJ molecular chaperone homology domain Tchl_2047 SM00434 DNA Topoisomerase IV Tchl_2049 SM00830 Chorismate mutase type II Tchl_2053 SM00316 Ribosomal protein S1-like RNA-binding domain Tchl_2054 SM00411 bacterial (prokaryotic) histone like domain Tchl_2056 SM00028 Tetratricopeptide repeats Tchl_2064 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Tchl_2069 SM00873 B3/4 domain Tchl_2069 SM00874 tRNA synthetase B5 domain Tchl_2069 SM00896 Ferredoxin-fold anticodon binding domain Tchl_2070 SM00411 bacterial (prokaryotic) histone like domain Tchl_2071 SM00422 helix_turn_helix, mercury resistance Tchl_2075 SM00257 Lysin motif Tchl_2081 SM01130 Tchl_2081 Tchl_2108 SM00422 helix_turn_helix, mercury resistance Tchl_2111 SM00900 Tchl_2111 Tchl_2116 SM00932 Scaffold protein Nfu/NifU N terminal Tchl_2117 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Tchl_2121 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Tchl_2121 SM00091 PAS domain Tchl_2121 SM00387 Histidine kinase-like ATPases Tchl_2121 SM00388 His Kinase A (phosphoacceptor) domain Tchl_2121 SM00448 cheY-homologous receiver domain Tchl_2122 SM00448 cheY-homologous receiver domain Tchl_2122 SM00862 Transcriptional regulatory protein, C terminal Tchl_2128 SM00347 helix_turn_helix multiple antibiotic resistance protein Tchl_2130 SM00881 CoA binding domain Tchl_2140 SM00116 Domain in cystathionine beta-synthase and other proteins. Tchl_2154 SM00822 Tchl_2154 Tchl_2157 SM00382 ATPases associated with a variety of cellular activities Tchl_2158 SM00382 ATPases associated with a variety of cellular activities Tchl_2160 SM00434 DNA Topoisomerase IV Tchl_2161 SM00387 Histidine kinase-like ATPases Tchl_2161 SM00433 TopoisomeraseII Tchl_2169 SM01192 Tchl_2169 Tchl_2169 SM01193 Tchl_2169 Tchl_2179 SM01322 Tchl_2179 Tchl_2180 SM00052 Putative diguanylate phosphodiesterase Tchl_2180 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_2180 SM00091 PAS domain Tchl_2180 SM00267 diguanylate cyclase Tchl_2181 SM00487 DEAD-like helicases superfamily Tchl_2181 SM00490 helicase superfamily c-terminal domain Tchl_2182 SM00357 Cold shock protein domain Tchl_2184 SM00481 DNA polymerase alpha chain like domain Tchl_2190 SM00363 S4 RNA-binding domain Tchl_2192 SM00316 Ribosomal protein S1-like RNA-binding domain Tchl_2196 SM01387 Tchl_2196 Tchl_2197 SM00316 Ribosomal protein S1-like RNA-binding domain Tchl_2197 SM00322 K homology RNA-binding domain Tchl_2214 SM00382 ATPases associated with a variety of cellular activities Tchl_2219 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Tchl_2219 SM00267 diguanylate cyclase Tchl_2224 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Tchl_2225 SM00448 cheY-homologous receiver domain Tchl_2226 SM00073 Histidine Phosphotransfer domain Tchl_2227 SM00052 Putative diguanylate phosphodiesterase Tchl_2227 SM00448 cheY-homologous receiver domain Tchl_2228 SM00073 Histidine Phosphotransfer domain Tchl_2228 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_2228 SM00091 PAS domain Tchl_2228 SM00387 Histidine kinase-like ATPases Tchl_2228 SM00388 His Kinase A (phosphoacceptor) domain Tchl_2228 SM00448 cheY-homologous receiver domain Tchl_2228 SM01079 Tchl_2228 Tchl_2237 SM00937 Tchl_2237 Tchl_2241 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tchl_2241 SM00866 Tchl_2241 Tchl_2243 SM00382 ATPases associated with a variety of cellular activities Tchl_2246 SM00903 Flavin reductase like domain Tchl_2252 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Tchl_2254 SM00861 Transketolase, pyrimidine binding domain Tchl_2257 SM00797 Allophanate hydrolase subunit 2 Tchl_2258 SM00796 Allophanate hydrolase subunit 1 Tchl_2270 SM00729 Elongator protein 3, MiaB family, Radical SAM Tchl_2272 SM00450 Rhodanese Homology Domain Tchl_2276 SM00382 ATPases associated with a variety of cellular activities Tchl_2277 SM00849 Metallo-beta-lactamase superfamily Tchl_2281 SM00479 Tchl_2281 Tchl_2297 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_2297 SM00091 PAS domain Tchl_2297 SM00267 diguanylate cyclase Tchl_2299 SM00421 helix_turn_helix, Lux Regulon Tchl_2299 SM00448 cheY-homologous receiver domain Tchl_2306 SM00965 Secretin and TonB N terminus short domain Tchl_2316 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tchl_2316 SM00866 Tchl_2316 Tchl_2323 SM00861 Transketolase, pyrimidine binding domain Tchl_2327 SM00487 DEAD-like helicases superfamily Tchl_2327 SM00491 Tchl_2327 Tchl_2329 SM00852 Probable molybdopterin binding domain Tchl_2348 SM00248 ankyrin repeats Tchl_2350 SM00346 helix_turn_helix isocitrate lyase regulation Tchl_2355 SM00342 helix_turn_helix, arabinose operon control protein Tchl_2357 SM01092 CO dehydrogenase flavoprotein C-terminal domain Tchl_2358 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Tchl_2360 SM00347 helix_turn_helix multiple antibiotic resistance protein Tchl_2361 SM00382 ATPases associated with a variety of cellular activities Tchl_2362 SM00327 von Willebrand factor (vWF) type A domain Tchl_2369 SM00729 Elongator protein 3, MiaB family, Radical SAM Tchl_2378 SM00487 DEAD-like helicases superfamily Tchl_2378 SM00490 helicase superfamily c-terminal domain Tchl_2379 SM00226 Low molecular weight phosphatase family Tchl_2380 SM00316 Ribosomal protein S1-like RNA-binding domain Tchl_2381 SM00363 S4 RNA-binding domain Tchl_2389 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Tchl_2390 SM00822 Tchl_2390 Tchl_2392 SM00825 Beta-ketoacyl synthase Tchl_2399 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tchl_2404 SM00358 Double-stranded RNA binding motif Tchl_2404 SM00535 Ribonuclease III family Tchl_2410 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Tchl_2410 SM00465 GIY-YIG type nucleases (URI domain) Tchl_2416 SM00729 Elongator protein 3, MiaB family, Radical SAM Tchl_2448 SM00422 helix_turn_helix, mercury resistance Tchl_2460 SM00248 ankyrin repeats Tchl_2469 SM00382 ATPases associated with a variety of cellular activities Tchl_2472 SM00448 cheY-homologous receiver domain Tchl_2472 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tchl_2473 SM00062 Bacterial periplasmic substrate-binding proteins Tchl_2473 SM00073 Histidine Phosphotransfer domain Tchl_2473 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_2473 SM00091 PAS domain Tchl_2473 SM00387 Histidine kinase-like ATPases Tchl_2473 SM00388 His Kinase A (phosphoacceptor) domain Tchl_2473 SM00448 cheY-homologous receiver domain Tchl_2479 SM00861 Transketolase, pyrimidine binding domain Tchl_2488 SM00904 Riboflavin kinase Tchl_2489 SM00646 Tchl_2489 Tchl_2509 SM00448 cheY-homologous receiver domain Tchl_2513 SM00382 ATPases associated with a variety of cellular activities Tchl_2539 SM00052 Putative diguanylate phosphodiesterase Tchl_2539 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Tchl_2539 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_2539 SM00091 PAS domain Tchl_2539 SM00267 diguanylate cyclase Tchl_2543 SM00387 Histidine kinase-like ATPases Tchl_2543 SM00388 His Kinase A (phosphoacceptor) domain Tchl_2544 SM00448 cheY-homologous receiver domain Tchl_2545 SM00479 Tchl_2545 Tchl_2548 SM00382 ATPases associated with a variety of cellular activities Tchl_2548 SM01086 C-terminal, D2-small domain, of ClpB protein Tchl_2556 SM00100 Cyclic nucleotide-monophosphate binding domain Tchl_2556 SM00419 helix_turn_helix, cAMP Regulatory protein Tchl_2559 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Tchl_2563 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Tchl_2563 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_2563 SM00387 Histidine kinase-like ATPases Tchl_2564 SM00421 helix_turn_helix, Lux Regulon Tchl_2564 SM00448 cheY-homologous receiver domain Tchl_2565 SM00347 helix_turn_helix multiple antibiotic resistance protein Tchl_2570 SM00116 Domain in cystathionine beta-synthase and other proteins. Tchl_2570 SM01240 Tchl_2570 Tchl_2579 SM00487 DEAD-like helicases superfamily Tchl_2581 SM00530 Helix-turn-helix XRE-family like proteins Tchl_2582 SM00487 DEAD-like helicases superfamily Tchl_2582 SM00490 helicase superfamily c-terminal domain Tchl_2593 SM00887 Ethylbenzene dehydrogenase Tchl_2600 SM00729 Elongator protein 3, MiaB family, Radical SAM Tchl_2603 SM00100 Cyclic nucleotide-monophosphate binding domain Tchl_2603 SM00419 helix_turn_helix, cAMP Regulatory protein Tchl_2604 SM00327 von Willebrand factor (vWF) type A domain Tchl_2610 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Tchl_2613 SM00646 Tchl_2613 Tchl_2617 SM00382 ATPases associated with a variety of cellular activities Tchl_2622 SM00479 Tchl_2622 Tchl_2623 SM00116 Domain in cystathionine beta-synthase and other proteins. Tchl_2624 SM00670 Large family of predicted nucleotide-binding domains Tchl_2638 SM00316 Ribosomal protein S1-like RNA-binding domain Tchl_2638 SM00732 Likely ribonuclease with RNase H fold. Tchl_2640 SM00881 CoA binding domain Tchl_2642 SM00450 Rhodanese Homology Domain Tchl_2645 SM00382 ATPases associated with a variety of cellular activities Tchl_2651 SM00052 Putative diguanylate phosphodiesterase Tchl_2651 SM00267 diguanylate cyclase Tchl_2652 SM00487 DEAD-like helicases superfamily Tchl_2652 SM00490 helicase superfamily c-terminal domain Tchl_2652 SM00982 Tchl_2652 Tchl_2652 SM01058 CarD-like/TRCF domain Tchl_2661 SM00954 Region found in RelA / SpoT proteins Tchl_2665 SM00382 ATPases associated with a variety of cellular activities Tchl_2671 SM00893 Electron transfer flavoprotein domain Tchl_2672 SM00893 Electron transfer flavoprotein domain Tchl_2678 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_2678 SM00387 Histidine kinase-like ATPases Tchl_2678 SM00388 His Kinase A (phosphoacceptor) domain Tchl_2679 SM00448 cheY-homologous receiver domain Tchl_2679 SM00862 Transcriptional regulatory protein, C terminal Tchl_2683 SM00986 Uracil DNA glycosylase superfamily Tchl_2683 SM00987 UreE urease accessory protein, C-terminal domain Tchl_2686 SM00382 ATPases associated with a variety of cellular activities Tchl_2691 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tchl_2692 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tchl_2698 SM00387 Histidine kinase-like ATPases Tchl_2698 SM00388 His Kinase A (phosphoacceptor) domain Tchl_2699 SM00448 cheY-homologous receiver domain Tchl_2699 SM00862 Transcriptional regulatory protein, C terminal Tchl_2704 SM01018 B12 binding domain Tchl_2712 SM00670 Large family of predicted nucleotide-binding domains Tchl_2730 SM00062 Bacterial periplasmic substrate-binding proteins Tchl_2731 SM00382 ATPases associated with a variety of cellular activities Tchl_2735 SM00530 Helix-turn-helix XRE-family like proteins Tchl_2741 SM00382 ATPases associated with a variety of cellular activities Tchl_2747 SM00966 SpoVT / AbrB like domain Tchl_2748 SM00248 ankyrin repeats Tchl_2749 SM00631 Tchl_2749 Tchl_2757 SM00967 RNA 2'-O ribose methyltransferase substrate binding Tchl_2763 SM00935 Outer membrane protein (OmpH-like) Tchl_2765 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tchl_2774 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tchl_2777 SM00838 Elongation factor G C-terminus Tchl_2779 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Tchl_2779 SM00292 breast cancer carboxy-terminal domain Tchl_2779 SM00532 Ligase N family Tchl_2780 SM00771 ZipA, C-terminal domain (FtsZ-binding) Tchl_2799 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Tchl_2799 SM00534 ATPase domain of DNA mismatch repair MUTS family Tchl_2802 SM00116 Domain in cystathionine beta-synthase and other proteins. Tchl_2803 SM00479 Tchl_2803 Tchl_2843 SM00530 Helix-turn-helix XRE-family like proteins Tchl_2855 SM00470 ParB-like nuclease domain Tchl_2858 SM00849 Metallo-beta-lactamase superfamily Tchl_2860 SM00382 ATPases associated with a variety of cellular activities Tchl_2865 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tchl_2867 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tchl_2869 SM00248 ankyrin repeats Tchl_2878 SM00448 cheY-homologous receiver domain Tchl_2878 SM00862 Transcriptional regulatory protein, C terminal Tchl_2879 SM00387 Histidine kinase-like ATPases Tchl_2879 SM00388 His Kinase A (phosphoacceptor) domain Tchl_2881 SM00422 helix_turn_helix, mercury resistance Tchl_2888 SM00267 diguanylate cyclase Tchl_2896 SM00411 bacterial (prokaryotic) histone like domain Tchl_2897 SM00382 ATPases associated with a variety of cellular activities Tchl_2897 SM00464 Found in ATP-dependent protease La (LON) Tchl_2898 SM00382 ATPases associated with a variety of cellular activities Tchl_2898 SM00994 ClpX C4-type zinc finger Tchl_2898 SM01086 C-terminal, D2-small domain, of ClpB protein Tchl_2901 SM00763 PrkA AAA domain Tchl_2909 SM00382 ATPases associated with a variety of cellular activities Tchl_2911 SM00843 Tchl_2911 Tchl_2912 SM00100 Cyclic nucleotide-monophosphate binding domain Tchl_2912 SM00419 helix_turn_helix, cAMP Regulatory protein Tchl_2914 SM00463 Small MutS-related domain Tchl_2915 SM00938 Nitrogen regulatory protein P-II Tchl_2925 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tchl_2926 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tchl_2935 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Tchl_2936 SM00226 Low molecular weight phosphatase family Tchl_2938 SM00382 ATPases associated with a variety of cellular activities Tchl_2942 SM00382 ATPases associated with a variety of cellular activities Tchl_2948 SM00382 ATPases associated with a variety of cellular activities Tchl_2950 SM01103 Tchl_2950 Tchl_2952 SM00851 MGS-like domain Tchl_2952 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Tchl_2953 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Tchl_2954 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_2954 SM00091 PAS domain Tchl_2954 SM00387 Histidine kinase-like ATPases Tchl_2954 SM00388 His Kinase A (phosphoacceptor) domain Tchl_2954 SM00448 cheY-homologous receiver domain Tchl_2962 SM00220 Serine/Threonine protein kinases, catalytic domain Tchl_2976 SM00881 CoA binding domain Tchl_2980 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tchl_2980 SM00895 Tchl_2980 Tchl_2985 SM00382 ATPases associated with a variety of cellular activities Tchl_2985 SM00448 cheY-homologous receiver domain Tchl_2986 SM00387 Histidine kinase-like ATPases Tchl_2986 SM00388 His Kinase A (phosphoacceptor) domain Tchl_2994 SM00382 ATPases associated with a variety of cellular activities Tchl_2995 SM00382 ATPases associated with a variety of cellular activities Tchl_3000 SM00382 ATPases associated with a variety of cellular activities Tchl_3000 SM00448 cheY-homologous receiver domain Tchl_3001 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_3001 SM00387 Histidine kinase-like ATPases Tchl_3001 SM00388 His Kinase A (phosphoacceptor) domain Tchl_3002 SM00893 Electron transfer flavoprotein domain Tchl_3003 SM00893 Electron transfer flavoprotein domain Tchl_3007 SM00382 ATPases associated with a variety of cellular activities Tchl_3008 SM00382 ATPases associated with a variety of cellular activities Tchl_3012 SM00342 helix_turn_helix, arabinose operon control protein Tchl_3034 SM00945 ProQ/FINO family Tchl_3037 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Tchl_3037 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Tchl_3039 SM00421 helix_turn_helix, Lux Regulon Tchl_3041 SM00903 Flavin reductase like domain Tchl_3050 SM00090 RIO-like kinase Tchl_3061 SM00857 Resolvase, N terminal domain Tchl_3062 SM00014 Acid phosphatase homologues Tchl_3069 SM00382 ATPases associated with a variety of cellular activities Tchl_3082 SM00346 helix_turn_helix isocitrate lyase regulation Tchl_3087 SM00849 Metallo-beta-lactamase superfamily Tchl_3091 SM00382 ATPases associated with a variety of cellular activities Tchl_3093 SM00746 metallochaperone-like domain Tchl_3104 SM00448 cheY-homologous receiver domain Tchl_3104 SM00862 Transcriptional regulatory protein, C terminal Tchl_3105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_3105 SM00387 Histidine kinase-like ATPases Tchl_3105 SM00388 His Kinase A (phosphoacceptor) domain Tchl_3109 SM00090 RIO-like kinase Tchl_3111 SM00342 helix_turn_helix, arabinose operon control protein Tchl_3122 SM01001 AIR carboxylase Tchl_3124 SM01091 Transporter associated domain Tchl_3125 SM00421 helix_turn_helix, Lux Regulon Tchl_3125 SM00448 cheY-homologous receiver domain Tchl_3126 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_3126 SM00091 PAS domain Tchl_3126 SM00387 Histidine kinase-like ATPases Tchl_3126 SM00388 His Kinase A (phosphoacceptor) domain Tchl_3134 SM01211 Tchl_3134 Tchl_3165 SM00900 Tchl_3165 Tchl_3167 SM00478 endonuclease III Tchl_3167 SM00525 Tchl_3167 Tchl_3172 SM00478 endonuclease III Tchl_3172 SM01009 AlkA N-terminal domain Tchl_3183 SM00382 ATPases associated with a variety of cellular activities Tchl_3185 SM00347 helix_turn_helix multiple antibiotic resistance protein Tchl_3187 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tchl_3187 SM00895 Tchl_3187 Tchl_3190 SM00387 Histidine kinase-like ATPases Tchl_3198 SM00073 Histidine Phosphotransfer domain Tchl_3198 SM00260 Two component signalling adaptor domain Tchl_3198 SM00387 Histidine kinase-like ATPases Tchl_3198 SM01231 Tchl_3198 Tchl_3200 SM00448 cheY-homologous receiver domain Tchl_3201 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tchl_3202 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_3202 SM00387 Histidine kinase-like ATPases Tchl_3202 SM00388 His Kinase A (phosphoacceptor) domain Tchl_3203 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_3203 SM00387 Histidine kinase-like ATPases Tchl_3203 SM00448 cheY-homologous receiver domain Tchl_3204 SM00421 helix_turn_helix, Lux Regulon Tchl_3204 SM00448 cheY-homologous receiver domain Tchl_3205 SM00052 Putative diguanylate phosphodiesterase Tchl_3205 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Tchl_3205 SM00091 PAS domain Tchl_3205 SM00267 diguanylate cyclase Tchl_3205 SM00448 cheY-homologous receiver domain Tchl_3212 SM00729 Elongator protein 3, MiaB family, Radical SAM Tchl_3213 SM00100 Cyclic nucleotide-monophosphate binding domain Tchl_3213 SM00419 helix_turn_helix, cAMP Regulatory protein Tchl_3215 SM00100 Cyclic nucleotide-monophosphate binding domain Tchl_3215 SM00419 helix_turn_helix, cAMP Regulatory protein Tchl_3216 SM00849 Metallo-beta-lactamase superfamily Tchl_3216 SM01027 Beta-Casp domain Tchl_3232 SM00838 Elongation factor G C-terminus Tchl_3232 SM00889 Elongation factor G, domain IV Tchl_3237 SM01329 Tchl_3237 Tchl_3246 SM00357 Cold shock protein domain Tchl_3248 SM00382 ATPases associated with a variety of cellular activities Tchl_3248 SM01086 C-terminal, D2-small domain, of ClpB protein Tchl_3253 SM00448 cheY-homologous receiver domain Tchl_3253 SM00862 Transcriptional regulatory protein, C terminal Tchl_3254 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_3254 SM00387 Histidine kinase-like ATPases Tchl_3254 SM00388 His Kinase A (phosphoacceptor) domain Tchl_3256 SM00450 Rhodanese Homology Domain Tchl_3258 SM00363 S4 RNA-binding domain Tchl_3261 SM00859 Semialdehyde dehydrogenase, NAD binding domain Tchl_3274 SM00382 ATPases associated with a variety of cellular activities Tchl_3274 SM00448 cheY-homologous receiver domain Tchl_3280 SM00880 Tchl_3280 Tchl_3280 SM01118 Tchl_3280 Tchl_3281 SM00855 Phosphoglycerate mutase family Tchl_3292 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Tchl_3301 SM00852 Probable molybdopterin binding domain Tchl_3305 SM00855 Phosphoglycerate mutase family Tchl_3314 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tchl_3314 SM00245 tail specific protease Tchl_3316 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Tchl_3317 SM00450 Rhodanese Homology Domain Tchl_3324 SM00729 Elongator protein 3, MiaB family, Radical SAM Tchl_3324 SM00876 Biotin and Thiamin Synthesis associated domain Tchl_3327 SM01004 Delta-aminolevulinic acid dehydratase Tchl_3330 SM00852 Probable molybdopterin binding domain Tchl_3344 SM00861 Transketolase, pyrimidine binding domain Tchl_3345 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Tchl_3361 SM00859 Semialdehyde dehydrogenase, NAD binding domain Tchl_3362 SM01329 Tchl_3362 Tchl_3372 SM00116 Domain in cystathionine beta-synthase and other proteins. Tchl_3375 SM00357 Cold shock protein domain Tchl_3375 SM00382 ATPases associated with a variety of cellular activities Tchl_3375 SM00959 Rho termination factor, N-terminal domain Tchl_3386 SM00729 Elongator protein 3, MiaB family, Radical SAM Tchl_3389 SM00822 Tchl_3389 Tchl_3397 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Tchl_3398 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tchl_3402 SM00382 ATPases associated with a variety of cellular activities Tchl_3403 SM00382 ATPases associated with a variety of cellular activities Tchl_3438 SM00448 cheY-homologous receiver domain Tchl_3438 SM00862 Transcriptional regulatory protein, C terminal Tchl_3439 SM00387 Histidine kinase-like ATPases Tchl_3439 SM00388 His Kinase A (phosphoacceptor) domain Tchl_3441 SM00947 Carbonic anhydrase Tchl_3444 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tchl_3445 SM00487 DEAD-like helicases superfamily Tchl_3445 SM00490 helicase superfamily c-terminal domain Tchl_3450 SM00448 cheY-homologous receiver domain Tchl_3451 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tchl_3451 SM00387 Histidine kinase-like ATPases Tchl_3451 SM00388 His Kinase A (phosphoacceptor) domain Tchl_3470 SM01234 Tchl_3470