locus-tag class description AC731_000020 PF00512 His Kinase A (phospho-acceptor) domain AC731_000020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_000020 PF16527 Two-component sensor protein CpxA, periplasmic domain AC731_000020 PF00672 HAMP domain AC731_000025 PF00486 Transcriptional regulatory protein, C terminal AC731_000025 PF00072 Response regulator receiver domain AC731_000035 PF00463 Isocitrate lyase family AC731_000040 PF03737 Aldolase/RraA AC731_000045 PF02861 Clp amino terminal domain, pathogenicity island component AC731_000045 PF10431 C-terminal, D2-small domain, of ClpB protein AC731_000045 PF00004 ATPase family associated with various cellular activities (AAA) AC731_000045 PF07724 AAA domain (Cdc48 subfamily) AC731_000045 PF17871 AAA lid domain AC731_000050 PF02617 ATP-dependent Clp protease adaptor protein ClpS AC731_000055 PF00313 'Cold-shock' DNA-binding domain AC731_000060 PF00471 Ribosomal protein L33 AC731_000065 PF00830 Ribosomal L28 family AC731_000070 PF04002 RadC-like JAB domain AC731_000075 PF04127 DNA / pantothenate metabolism flavoprotein AC731_000075 PF02441 Flavoprotein AC731_000080 PF00692 dUTPase AC731_000085 PF00293 NUDIX domain AC731_000085 PF13344 Haloacid dehalogenase-like hydrolase AC731_000090 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AC731_000095 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding AC731_000095 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC731_000095 PF10518 TAT (twin-arginine translocation) pathway signal sequence AC731_000105 PF01022 Bacterial regulatory protein, arsR family AC731_000110 PF00174 Oxidoreductase molybdopterin binding domain AC731_000115 PF00034 Cytochrome c AC731_000150 PF00474 Sodium:solute symporter family AC731_000165 PF00679 Elongation factor G C-terminus AC731_000165 PF14492 Elongation Factor G, domain II AC731_000165 PF03764 Elongation factor G, domain IV AC731_000165 PF00009 Elongation factor Tu GTP binding domain AC731_000190 PF00892 EamA-like transporter family AC731_000195 PF01925 Sulfite exporter TauE/SafE AC731_000210 PF07690 Major Facilitator Superfamily AC731_000215 PF00106 short chain dehydrogenase AC731_000230 PF00115 Cytochrome C and Quinol oxidase polypeptide I AC731_000245 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AC731_000245 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AC731_000250 PF12801 4Fe-4S binding domain AC731_000250 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AC731_000250 PF13746 4Fe-4S dicluster domain AC731_000270 PF10996 Beta-Casp domain AC731_000270 PF00753 Metallo-beta-lactamase superfamily AC731_000270 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AC731_000275 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AC731_000275 PF00561 alpha/beta hydrolase fold AC731_000280 PF13545 Crp-like helix-turn-helix domain AC731_000280 PF00027 Cyclic nucleotide-binding domain AC731_000290 PF00027 Cyclic nucleotide-binding domain AC731_000290 PF13545 Crp-like helix-turn-helix domain AC731_000295 PF04055 Radical SAM superfamily AC731_000295 PF06969 HemN C-terminal domain AC731_000305 PF00376 MerR family regulatory protein AC731_000305 PF09278 MerR, DNA binding AC731_000310 PF00403 Heavy-metal-associated domain AC731_000320 PF00719 Inorganic pyrophosphatase AC731_000325 PF00072 Response regulator receiver domain AC731_000325 PF01339 CheB methylesterase AC731_000330 PF01739 CheR methyltransferase, SAM binding domain AC731_000330 PF03705 CheR methyltransferase, all-alpha domain AC731_000335 PF03975 CheD chemotactic sensory transduction AC731_000340 PF00672 HAMP domain AC731_000340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_000345 PF01584 CheW-like domain AC731_000350 PF00672 HAMP domain AC731_000350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_000355 PF01584 CheW-like domain AC731_000355 PF02895 Signal transducing histidine kinase, homodimeric domain AC731_000355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_000355 PF01627 Hpt domain AC731_000375 PF01979 Amidohydrolase family AC731_000390 PF01810 LysE type translocator AC731_000395 PF03707 Bacterial signalling protein N terminal repeat AC731_000395 PF00990 Diguanylate cyclase, GGDEF domain AC731_000395 PF00563 EAL domain AC731_000400 PF00158 Sigma-54 interaction domain AC731_000400 PF02954 Bacterial regulatory protein, Fis family AC731_000400 PF00072 Response regulator receiver domain AC731_000405 PF17149 Periplasmic sensor domain found in signal transduction proteins AC731_000405 PF00512 His Kinase A (phospho-acceptor) domain AC731_000405 PF00672 HAMP domain AC731_000405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_000405 PF01627 Hpt domain AC731_000405 PF00072 Response regulator receiver domain AC731_000410 PF03707 Bacterial signalling protein N terminal repeat AC731_000410 PF00563 EAL domain AC731_000410 PF00990 Diguanylate cyclase, GGDEF domain AC731_000430 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AC731_000430 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AC731_000435 PF01799 [2Fe-2S] binding domain AC731_000435 PF00111 2Fe-2S iron-sulfur cluster binding domain AC731_000450 PF00317 Ribonucleotide reductase, all-alpha domain AC731_000450 PF02867 Ribonucleotide reductase, barrel domain AC731_000450 PF03477 ATP cone domain AC731_000460 PF01545 Cation efflux family AC731_000465 PF13247 4Fe-4S dicluster domain AC731_000470 PF03916 Polysulphide reductase, NrfD AC731_000475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AC731_000475 PF00384 Molybdopterin oxidoreductase AC731_000475 PF01568 Molydopterin dinucleotide binding domain AC731_000480 PF00196 Bacterial regulatory proteins, luxR family AC731_000480 PF00072 Response regulator receiver domain AC731_000485 PF00512 His Kinase A (phospho-acceptor) domain AC731_000485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_000510 PF03449 Transcription elongation factor, N-terminal AC731_000510 PF01272 Transcription elongation factor, GreA/GreB, C-term AC731_000515 PF00672 HAMP domain AC731_000515 PF17200 Single Cache domain 2 AC731_000515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_000520 PF17200 Single Cache domain 2 AC731_000520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_000520 PF00672 HAMP domain AC731_000525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_000525 PF00183 Hsp90 protein AC731_000530 PF12399 Branched-chain amino acid ATP-binding cassette transporter AC731_000530 PF00005 ABC transporter AC731_000535 PF00005 ABC transporter AC731_000545 PF02653 Branched-chain amino acid transport system / permease component AC731_000555 PF00654 Voltage gated chloride channel AC731_000565 PF13525 Outer membrane lipoprotein AC731_000570 PF00849 RNA pseudouridylate synthase AC731_000585 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AC731_000590 PF00106 short chain dehydrogenase AC731_000595 PF00106 short chain dehydrogenase AC731_000600 PF07879 PHB/PHA accumulation regulator DNA-binding domain AC731_000600 PF05233 PHB accumulation regulatory domain AC731_000605 PF04055 Radical SAM superfamily AC731_000605 PF18693 TRAM domain AC731_000605 PF00919 Uncharacterized protein family UPF0004 AC731_000610 PF01734 Patatin-like phospholipase AC731_000615 PF01565 FAD binding domain AC731_000615 PF02913 FAD linked oxidases, C-terminal domain AC731_000650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC731_000650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC731_000655 PF07497 Rho termination factor, RNA-binding domain AC731_000655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC731_000655 PF07498 Rho termination factor, N-terminal domain AC731_000660 PF00085 Thioredoxin AC731_000665 PF00037 4Fe-4S binding domain AC731_000665 PF11953 Domain of unknown function (DUF3470) AC731_000675 PF13193 AMP-binding enzyme C-terminal domain AC731_000675 PF00501 AMP-binding enzyme AC731_000680 PF00205 Thiamine pyrophosphate enzyme, central domain AC731_000680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC731_000680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC731_000685 PF01842 ACT domain AC731_000690 PF01264 Chorismate synthase AC731_000695 PF12832 MFS_1 like family AC731_000700 PF01435 Peptidase family M48 AC731_000705 PF00330 Aconitase family (aconitate hydratase) AC731_000715 PF00694 Aconitase C-terminal domain AC731_000720 PF00180 Isocitrate/isopropylmalate dehydrogenase AC731_000725 PF02774 Semialdehyde dehydrogenase, dimerisation domain AC731_000725 PF01118 Semialdehyde dehydrogenase, NAD binding domain AC731_000740 PF01416 tRNA pseudouridine synthase AC731_000745 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AC731_000750 PF00291 Pyridoxal-phosphate dependent enzyme AC731_000755 PF00290 Tryptophan synthase alpha chain AC731_000760 PF01039 Carboxyl transferase domain AC731_000760 PF17848 Acetyl-coA carboxylase zinc finger domain AC731_000765 PF08245 Mur ligase middle domain AC731_000765 PF02875 Mur ligase family, glutamate ligase domain AC731_000780 PF00156 Phosphoribosyl transferase domain AC731_000785 PF01053 Cys/Met metabolism PLP-dependent enzyme AC731_000790 PF00149 Calcineurin-like phosphoesterase AC731_000795 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AC731_000800 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AC731_000805 PF01406 tRNA synthetases class I (C) catalytic domain AC731_000805 PF09190 DALR domain AC731_000810 PF00684 DnaJ central domain AC731_000810 PF00226 DnaJ domain AC731_000810 PF01556 DnaJ C terminal domain AC731_000815 PF00012 Hsp70 protein AC731_000820 PF01025 GrpE AC731_000830 PF03989 DNA gyrase C-terminal domain, beta-propeller AC731_000830 PF00521 DNA gyrase/topoisomerase IV, subunit A AC731_000835 PF00266 Aminotransferase class-V AC731_000840 PF01842 ACT domain AC731_000840 PF00800 Prephenate dehydratase AC731_000840 PF01817 Chorismate mutase type II AC731_000845 PF00155 Aminotransferase class I and II AC731_000850 PF02153 Prephenate dehydrogenase AC731_000850 PF01842 ACT domain AC731_000855 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AC731_000860 PF00575 S1 RNA binding domain AC731_000865 PF00216 Bacterial DNA-binding protein AC731_000875 PF18073 Rubredoxin metal binding domain AC731_000880 PF00291 Pyridoxal-phosphate dependent enzyme AC731_000905 PF04226 Transglycosylase associated protein AC731_000915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AC731_000915 PF03129 Anticodon binding domain AC731_000915 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AC731_000915 PF02824 TGS domain AC731_000920 PF00707 Translation initiation factor IF-3, C-terminal domain AC731_000920 PF05198 Translation initiation factor IF-3, N-terminal domain AC731_000925 PF01632 Ribosomal protein L35 AC731_000930 PF00453 Ribosomal protein L20 AC731_000935 PF01409 tRNA synthetases class II core domain (F) AC731_000935 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AC731_000940 PF01588 Putative tRNA binding domain AC731_000940 PF03483 B3/4 domain AC731_000940 PF03484 tRNA synthetase B5 domain AC731_000940 PF03147 Ferredoxin-fold anticodon binding domain AC731_000940 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AC731_000945 PF00216 Bacterial DNA-binding protein AC731_000960 PF01975 Survival protein SurE AC731_000970 PF01551 Peptidase family M23 AC731_000970 PF01476 LysM domain AC731_000975 PF04542 Sigma-70 region 2 AC731_000975 PF04539 Sigma-70 region 3 AC731_000975 PF04545 Sigma-70, region 4 AC731_000975 PF00140 Sigma-70 factor, region 1.2 AC731_000985 PF13406 Transglycosylase SLT domain AC731_000990 PF11992 Domain of unknown function (DUF3488) AC731_000990 PF13559 Domain of unknown function (DUF4129) AC731_000990 PF01841 Transglutaminase-like superfamily AC731_001000 PF17863 AAA lid domain AC731_001000 PF07726 ATPase family associated with various cellular activities (AAA) AC731_001005 PF00850 Histone deacetylase domain AC731_001010 PF00701 Dihydrodipicolinate synthetase family AC731_001015 PF06804 NlpB/DapX lipoprotein AC731_001025 PF08007 Cupin superfamily protein AC731_001030 PF05958 tRNA (Uracil-5-)-methyltransferase AC731_001040 PF00849 RNA pseudouridylate synthase AC731_001050 PF01312 FlhB HrpN YscU SpaS Family AC731_001055 PF00771 FHIPEP family AC731_001060 PF00448 SRP54-type protein, GTPase domain AC731_001070 PF04545 Sigma-70, region 4 AC731_001070 PF04539 Sigma-70 region 3 AC731_001070 PF04542 Sigma-70 region 2 AC731_001075 PF01618 MotA/TolQ/ExbB proton channel family AC731_001080 PF00691 OmpA family AC731_001080 PF13677 Membrane MotB of proton-channel complex MotA/MotB AC731_001085 PF00521 DNA gyrase/topoisomerase IV, subunit A AC731_001090 PF00204 DNA gyrase B AC731_001090 PF01751 Toprim domain AC731_001090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_001090 PF00986 DNA gyrase B subunit, carboxyl terminus AC731_001105 PF13144 Chaperone for flagella basal body P-ring formation AC731_001105 PF17656 FlgA N-terminal domain AC731_001110 PF00460 Flagella basal body rod protein AC731_001115 PF00460 Flagella basal body rod protein AC731_001115 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC731_001120 PF03963 Flagellar hook capping protein - N-terminal region AC731_001120 PF13860 FlgD Ig-like domain AC731_001120 PF13861 FlgD Tudor-like domain AC731_001125 PF07559 Flagellar basal body protein FlaE AC731_001125 PF00460 Flagella basal body rod protein AC731_001125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC731_001130 PF00460 Flagella basal body rod protein AC731_001130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC731_001135 PF00460 Flagella basal body rod protein AC731_001135 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC731_001140 PF02107 Flagellar L-ring protein AC731_001145 PF02119 Flagellar P-ring protein AC731_001150 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AC731_001150 PF10135 Rod binding protein AC731_001155 PF00460 Flagella basal body rod protein AC731_001155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AC731_001160 PF00669 Bacterial flagellin N-terminal helical region AC731_001170 PF01311 Bacterial export proteins, family 1 AC731_001175 PF01313 Bacterial export proteins, family 3 AC731_001180 PF00813 FliP family AC731_001185 PF04347 Flagellar biosynthesis protein, FliO AC731_001190 PF16973 Flagellar motor switch protein FliN N-terminal AC731_001190 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AC731_001195 PF02154 Flagellar motor switch protein FliM AC731_001195 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AC731_001215 PF18269 T3SS EscN ATPase C-terminal domain AC731_001215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC731_001225 PF14841 FliG middle domain AC731_001225 PF14842 FliG N-terminal domain AC731_001225 PF01706 FliG C-terminal domain AC731_001230 PF01514 Secretory protein of YscJ/FliF family AC731_001230 PF08345 Flagellar M-ring protein C-terminal AC731_001235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_001235 PF00512 His Kinase A (phospho-acceptor) domain AC731_001235 PF00989 PAS fold AC731_001240 PF00158 Sigma-54 interaction domain AC731_001240 PF00072 Response regulator receiver domain AC731_001240 PF02954 Bacterial regulatory protein, Fis family AC731_001245 PF02049 Flagellar hook-basal body complex protein FliE AC731_001260 PF07238 PilZ domain AC731_001260 PF07317 Flagellar regulator YcgR AC731_001265 PF07238 PilZ domain AC731_001265 PF07317 Flagellar regulator YcgR AC731_001270 PF01312 FlhB HrpN YscU SpaS Family AC731_001285 PF02561 Flagellar protein FliS AC731_001290 PF02465 Flagellar hook-associated protein 2 N-terminus AC731_001290 PF07196 Flagellin hook IN motif AC731_001290 PF07195 Flagellar hook-associated protein 2 C-terminus AC731_001295 PF03646 FlaG protein AC731_001300 PF00669 Bacterial flagellin N-terminal helical region AC731_001300 PF00700 Bacterial flagellin C-terminal helical region AC731_001315 PF00535 Glycosyl transferase family 2 AC731_001325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AC731_001330 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AC731_001350 PF00669 Bacterial flagellin N-terminal helical region AC731_001350 PF00700 Bacterial flagellin C-terminal helical region AC731_001355 PF04229 GrpB protein AC731_001360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC731_001360 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC731_001365 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AC731_001365 PF02817 e3 binding domain AC731_001365 PF00364 Biotin-requiring enzyme AC731_001370 PF00456 Transketolase, thiamine diphosphate binding domain AC731_001370 PF17831 Pyruvate dehydrogenase E1 component middle domain AC731_001380 PF00989 PAS fold AC731_001380 PF00512 His Kinase A (phospho-acceptor) domain AC731_001380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_001385 PF00196 Bacterial regulatory proteins, luxR family AC731_001385 PF00072 Response regulator receiver domain AC731_001390 PF03471 Transporter associated domain AC731_001390 PF00999 Sodium/hydrogen exchanger family AC731_001390 PF02080 TrkA-C domain AC731_001395 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AC731_001395 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AC731_001400 PF00731 AIR carboxylase AC731_001405 PF02222 ATP-grasp domain AC731_001405 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AC731_001410 PF03481 Putative GTP-binding controlling metal-binding AC731_001410 PF01300 Telomere recombination AC731_001435 PF00239 Resolvase, N terminal domain AC731_001435 PF02796 Helix-turn-helix domain of resolvase AC731_001485 PF01420 Type I restriction modification DNA specificity domain AC731_001490 PF12102 Domain of unknown function (DUF3578) AC731_001490 PF07728 AAA domain (dynein-related subfamily) AC731_001515 PF02678 Pirin AC731_001515 PF05726 Pirin C-terminal cupin domain AC731_001520 PF00579 tRNA synthetases class I (W and Y) AC731_001530 PF14480 DNA polymerase III polC-type N-terminus I AC731_001530 PF11490 DNA polymerase III polC-type N-terminus II AC731_001530 PF07733 Bacterial DNA polymerase III alpha NTPase domain AC731_001530 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AC731_001530 PF02811 PHP domain AC731_001530 PF00929 Exonuclease AC731_001535 PF01113 Dihydrodipicolinate reductase, N-terminus AC731_001535 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain AC731_001545 PF02798 Glutathione S-transferase, N-terminal domain AC731_001555 PF00501 AMP-binding enzyme AC731_001565 PF00106 short chain dehydrogenase AC731_001575 PF00072 Response regulator receiver domain AC731_001575 PF00486 Transcriptional regulatory protein, C terminal AC731_001580 PF08521 Two-component sensor kinase N-terminal AC731_001580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_001580 PF00512 His Kinase A (phospho-acceptor) domain AC731_001595 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC731_001600 PF00355 Rieske [2Fe-2S] domain AC731_001600 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AC731_001605 PF07715 TonB-dependent Receptor Plug Domain AC731_001605 PF00593 TonB dependent receptor AC731_001615 PF02798 Glutathione S-transferase, N-terminal domain AC731_001615 PF00043 Glutathione S-transferase, C-terminal domain AC731_001620 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AC731_001620 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AC731_001625 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AC731_001630 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AC731_001635 PF00374 Nickel-dependent hydrogenase AC731_001645 PF03707 Bacterial signalling protein N terminal repeat AC731_001645 PF00563 EAL domain AC731_001645 PF00990 Diguanylate cyclase, GGDEF domain AC731_001665 PF01546 Peptidase family M20/M25/M40 AC731_001665 PF07687 Peptidase dimerisation domain AC731_001670 PF00180 Isocitrate/isopropylmalate dehydrogenase AC731_001675 PF00710 Asparaginase, N-terminal AC731_001675 PF17763 Glutaminase/Asparaginase C-terminal domain AC731_001680 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC731_001690 PF03480 Bacterial extracellular solute-binding protein, family 7 AC731_001695 PF01425 Amidase AC731_001700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_001700 PF03466 LysR substrate binding domain AC731_001720 PF00580 UvrD/REP helicase N-terminal domain AC731_001720 PF13361 UvrD-like helicase C-terminal domain AC731_001735 PF00781 Diacylglycerol kinase catalytic domain AC731_001740 PF00149 Calcineurin-like phosphoesterase AC731_001745 PF00563 EAL domain AC731_001745 PF00990 Diguanylate cyclase, GGDEF domain AC731_001745 PF03707 Bacterial signalling protein N terminal repeat AC731_001750 PF02830 V4R domain AC731_001750 PF00158 Sigma-54 interaction domain AC731_001750 PF02954 Bacterial regulatory protein, Fis family AC731_001750 PF06505 Activator of aromatic catabolism AC731_001755 PF00111 2Fe-2S iron-sulfur cluster binding domain AC731_001760 PF06099 Phenol hydroxylase subunit AC731_001765 PF02332 Methane/Phenol/Toluene Hydroxylase AC731_001770 PF02406 MmoB/DmpM family AC731_001775 PF04945 YHS domain AC731_001775 PF02332 Methane/Phenol/Toluene Hydroxylase AC731_001780 PF04663 Phenol hydroxylase conserved region AC731_001785 PF00111 2Fe-2S iron-sulfur cluster binding domain AC731_001785 PF00175 Oxidoreductase NAD-binding domain AC731_001785 PF00970 Oxidoreductase FAD-binding domain AC731_001790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AC731_001800 PF03928 Haem-degrading AC731_001805 PF00171 Aldehyde dehydrogenase family AC731_001815 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AC731_001815 PF01118 Semialdehyde dehydrogenase, NAD binding domain AC731_001820 PF00682 HMGL-like AC731_001820 PF07836 DmpG-like communication domain AC731_001830 PF01361 Tautomerase enzyme AC731_001845 PF01212 Beta-eliminating lyase AC731_001850 PF00375 Sodium:dicarboxylate symporter family AC731_001865 PF00528 Binding-protein-dependent transport system inner membrane component AC731_001870 PF00528 Binding-protein-dependent transport system inner membrane component AC731_001875 PF13416 Bacterial extracellular solute-binding protein AC731_001880 PF00005 ABC transporter AC731_001880 PF17912 MalK OB fold domain AC731_001885 PF08220 DeoR-like helix-turn-helix domain AC731_001885 PF00455 DeoR C terminal sensor domain AC731_001890 PF00534 Glycosyl transferases group 1 AC731_001890 PF13439 Glycosyltransferase Family 4 AC731_001900 PF00080 Copper/zinc superoxide dismutase (SODC) AC731_001910 PF03009 Glycerophosphoryl diester phosphodiesterase family AC731_001925 PF13406 Transglycosylase SLT domain AC731_001930 PF00392 Bacterial regulatory proteins, gntR family AC731_001930 PF07729 FCD domain AC731_001935 PF02652 L-lactate permease AC731_001940 PF02754 Cysteine-rich domain AC731_001945 PF02589 LUD domain AC731_001945 PF13183 4Fe-4S dicluster domain AC731_001945 PF11870 Domain of unknown function (DUF3390) AC731_001950 PF02589 LUD domain AC731_001965 PF01389 OmpA-like transmembrane domain AC731_001965 PF00691 OmpA family AC731_001970 PF01979 Amidohydrolase family AC731_001975 PF00069 Protein kinase domain AC731_001975 PF03793 PASTA domain AC731_001980 PF00762 Ferrochelatase AC731_001985 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AC731_001985 PF01628 HrcA protein C terminal domain AC731_001990 PF01513 ATP-NAD kinase AC731_001995 PF02463 RecF/RecN/SMC N terminal domain AC731_002000 PF01475 Ferric uptake regulator family AC731_002005 PF04355 SmpA / OmlA family AC731_002010 PF05173 Dihydrodipicolinate reductase, C-terminus AC731_002010 PF01113 Dihydrodipicolinate reductase, N-terminus AC731_002015 PF00512 His Kinase A (phospho-acceptor) domain AC731_002015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_002015 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AC731_002015 PF00072 Response regulator receiver domain AC731_002015 PF01627 Hpt domain AC731_002015 PF00672 HAMP domain AC731_002020 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AC731_002020 PF00117 Glutamine amidotransferase class-I AC731_002025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC731_002025 PF02142 MGS-like domain AC731_002025 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AC731_002030 PF01272 Transcription elongation factor, GreA/GreB, C-term AC731_002030 PF03449 Transcription elongation factor, N-terminal AC731_002035 PF01985 CRS1 / YhbY (CRM) domain AC731_002040 PF01728 FtsJ-like methyltransferase AC731_002045 PF17862 AAA+ lid domain AC731_002045 PF06480 FtsH Extracellular AC731_002045 PF00004 ATPase family associated with various cellular activities (AAA) AC731_002045 PF01434 Peptidase family M41 AC731_002050 PF00809 Pterin binding enzyme AC731_002055 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AC731_002055 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AC731_002055 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AC731_002055 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AC731_002060 PF12849 PBP superfamily domain AC731_002065 PF00528 Binding-protein-dependent transport system inner membrane component AC731_002070 PF00528 Binding-protein-dependent transport system inner membrane component AC731_002075 PF00005 ABC transporter AC731_002080 PF00121 Triosephosphate isomerase AC731_002085 PF03840 Preprotein translocase SecG subunit AC731_002095 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AC731_002100 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AC731_002105 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AC731_002110 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AC731_002120 PF10531 SLBB domain AC731_002120 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AC731_002120 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AC731_002125 PF00384 Molybdopterin oxidoreductase AC731_002125 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AC731_002125 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AC731_002130 PF00146 NADH dehydrogenase AC731_002135 PF12838 4Fe-4S dicluster domain AC731_002140 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AC731_002145 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AC731_002150 PF00361 Proton-conducting membrane transporter AC731_002150 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AC731_002155 PF00361 Proton-conducting membrane transporter AC731_002155 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AC731_002160 PF00361 Proton-conducting membrane transporter AC731_002170 PF00293 NUDIX domain AC731_002180 PF00795 Carbon-nitrogen hydrolase AC731_002180 PF02540 NAD synthase AC731_002185 PF00543 Nitrogen regulatory protein P-II AC731_002190 PF01713 Smr domain AC731_002195 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC731_002200 PF00027 Cyclic nucleotide-binding domain AC731_002200 PF13545 Crp-like helix-turn-helix domain AC731_002205 PF01580 FtsK/SpoIIIE family AC731_002205 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AC731_002205 PF17854 FtsK alpha domain AC731_002205 PF09397 Ftsk gamma domain AC731_002210 PF03548 Outer membrane lipoprotein carrier protein LolA AC731_002215 PF00004 ATPase family associated with various cellular activities (AAA) AC731_002215 PF16193 AAA C-terminal domain AC731_002215 PF12002 MgsA AAA+ ATPase C terminal AC731_002225 PF02403 Seryl-tRNA synthetase N-terminal domain AC731_002225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AC731_002230 PF01464 Transglycosylase SLT domain AC731_002230 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC731_002235 PF01556 DnaJ C terminal domain AC731_002235 PF00226 DnaJ domain AC731_002255 PF02627 Carboxymuconolactone decarboxylase family AC731_002260 PF02649 Type I GTP cyclohydrolase folE2 AC731_002265 PF02780 Transketolase, C-terminal domain AC731_002265 PF02779 Transketolase, pyrimidine binding domain AC731_002265 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AC731_002270 PF00348 Polyprenyl synthetase AC731_002275 PF02609 Exonuclease VII small subunit AC731_002285 PF02401 LytB protein AC731_002290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC731_002295 PF01252 Signal peptidase (SPase) II AC731_002300 PF06827 Zinc finger found in FPG and IleRS AC731_002300 PF00133 tRNA synthetases class I (I, L, M and V) AC731_002300 PF08264 Anticodon-binding domain of tRNA AC731_002305 PF01687 Riboflavin kinase AC731_002305 PF06574 FAD synthetase AC731_002310 PF11741 AMIN domain AC731_002310 PF01520 N-acetylmuramoyl-L-alanine amidase AC731_002315 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AC731_002320 PF08331 Domain of unknown function (DUF1730) AC731_002330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AC731_002350 PF05981 CreA protein AC731_002360 PF01769 Divalent cation transporter AC731_002360 PF00571 CBS domain AC731_002360 PF03448 MgtE intracellular N domain AC731_002370 PF01136 Peptidase family U32 AC731_002370 PF12392 Collagenase AC731_002380 PF07995 Glucose / Sorbosone dehydrogenase AC731_002385 PF03793 PASTA domain AC731_002385 PF00069 Protein kinase domain AC731_002390 PF01219 Prokaryotic diacylglycerol kinase AC731_002395 PF05951 Bacterial protein of unknown function (DUF882) AC731_002400 PF03734 L,D-transpeptidase catalytic domain AC731_002400 PF01471 Putative peptidoglycan binding domain AC731_002405 PF13439 Glycosyltransferase Family 4 AC731_002405 PF00534 Glycosyl transferases group 1 AC731_002445 PF01022 Bacterial regulatory protein, arsR family AC731_002455 PF01758 Sodium Bile acid symporter family AC731_002480 PF00072 Response regulator receiver domain AC731_002480 PF00211 Adenylate and Guanylate cyclase catalytic domain AC731_002490 PF07728 AAA domain (dynein-related subfamily) AC731_002490 PF17868 AAA lid domain AC731_002490 PF12592 Protein of unknown function (DUF3763) AC731_002505 PF09350 Domain of unknown function (DUF1992) AC731_002520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_002520 PF08447 PAS fold AC731_002520 PF13426 PAS domain AC731_002525 PF03435 Saccharopine dehydrogenase NADP binding domain AC731_002525 PF16653 Saccharopine dehydrogenase C-terminal domain AC731_002530 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AC731_002540 PF12729 Four helix bundle sensory module for signal transduction AC731_002540 PF00672 HAMP domain AC731_002540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_002545 PF00005 ABC transporter AC731_002550 PF00528 Binding-protein-dependent transport system inner membrane component AC731_002555 PF00296 Luciferase-like monooxygenase AC731_002560 PF09084 NMT1/THI5 like AC731_002570 PF10518 TAT (twin-arginine translocation) pathway signal sequence AC731_002570 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC731_002570 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding AC731_002590 PF00528 Binding-protein-dependent transport system inner membrane component AC731_002595 PF00005 ABC transporter AC731_002600 PF00005 ABC transporter AC731_002620 PF00296 Luciferase-like monooxygenase AC731_002625 PF03358 NADPH-dependent FMN reductase AC731_002630 PF00005 ABC transporter AC731_002635 PF00528 Binding-protein-dependent transport system inner membrane component AC731_002640 PF09084 NMT1/THI5 like AC731_002645 PF00528 Binding-protein-dependent transport system inner membrane component AC731_002650 PF03180 NLPA lipoprotein AC731_002655 PF00005 ABC transporter AC731_002655 PF09383 NIL domain AC731_002660 PF03180 NLPA lipoprotein AC731_002665 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AC731_002665 PF00384 Molybdopterin oxidoreductase AC731_002665 PF01568 Molydopterin dinucleotide binding domain AC731_002675 PF00296 Luciferase-like monooxygenase AC731_002695 PF04542 Sigma-70 region 2 AC731_002695 PF08281 Sigma-70, region 4 AC731_002705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC731_002705 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AC731_002710 PF00158 Sigma-54 interaction domain AC731_002750 PF03459 TOBE domain AC731_002790 PF07690 Major Facilitator Superfamily AC731_002815 PF01883 Iron-sulfur cluster assembly protein AC731_002820 PF01592 NifU-like N terminal domain AC731_002825 PF00266 Aminotransferase class-V AC731_002830 PF01458 Uncharacterized protein family (UPF0051) AC731_002835 PF00005 ABC transporter AC731_002840 PF01458 Uncharacterized protein family (UPF0051) AC731_002845 PF02082 Transcriptional regulator AC731_002860 PF04241 Protein of unknown function (DUF423) AC731_002865 PF01554 MatE AC731_002870 PF02580 D-Tyr-tRNA(Tyr) deacylase AC731_002875 PF01053 Cys/Met metabolism PLP-dependent enzyme AC731_002880 PF17785 PUA-like domain AC731_002880 PF10672 S-adenosylmethionine-dependent methyltransferase AC731_002900 PF00392 Bacterial regulatory proteins, gntR family AC731_002900 PF00155 Aminotransferase class I and II AC731_002905 PF02321 Outer membrane efflux protein AC731_002910 PF00873 AcrB/AcrD/AcrF family AC731_002930 PF00990 Diguanylate cyclase, GGDEF domain AC731_002935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AC731_002940 PF00465 Iron-containing alcohol dehydrogenase AC731_002945 PF16925 Tetracyclin repressor-like, C-terminal domain AC731_002945 PF00440 Bacterial regulatory proteins, tetR family AC731_002950 PF07690 Major Facilitator Superfamily AC731_002960 PF00005 ABC transporter AC731_002965 PF13533 Biotin-lipoyl like AC731_002970 PF02405 Permease MlaE AC731_002975 PF00005 ABC transporter AC731_002990 PF02811 PHP domain AC731_002990 PF14579 Helix-hairpin-helix motif AC731_002990 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AC731_002990 PF07733 Bacterial DNA polymerase III alpha NTPase domain AC731_003000 PF02653 Branched-chain amino acid transport system / permease component AC731_003005 PF00005 ABC transporter AC731_003010 PF00749 tRNA synthetases class I (E and Q), catalytic domain AC731_003020 PF00072 Response regulator receiver domain AC731_003020 PF00196 Bacterial regulatory proteins, luxR family AC731_003025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_003025 PF07730 Histidine kinase AC731_003030 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AC731_003030 PF01266 FAD dependent oxidoreductase AC731_003035 PF05661 Protein of unknown function (DUF808) AC731_003040 PF00152 tRNA synthetases class II (D, K and N) AC731_003040 PF01336 OB-fold nucleic acid binding domain AC731_003045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_003045 PF02743 Cache domain AC731_003045 PF00672 HAMP domain AC731_003055 PF06470 SMC proteins Flexible Hinge Domain AC731_003055 PF02463 RecF/RecN/SMC N terminal domain AC731_003070 PF03462 PCRF domain AC731_003070 PF00472 RF-1 domain AC731_003075 PF02272 DHHA1 domain AC731_003075 PF01368 DHH family AC731_003075 PF17768 RecJ OB domain AC731_003100 PF00313 'Cold-shock' DNA-binding domain AC731_003105 PF11842 Domain of unknown function (DUF3362) AC731_003105 PF04055 Radical SAM superfamily AC731_003105 PF08497 Radical SAM N-terminal AC731_003110 PF00990 Diguanylate cyclase, GGDEF domain AC731_003110 PF03707 Bacterial signalling protein N terminal repeat AC731_003110 PF00563 EAL domain AC731_003115 PF12704 MacB-like periplasmic core domain AC731_003115 PF02687 FtsX-like permease family AC731_003120 PF00005 ABC transporter AC731_003130 PF13426 PAS domain AC731_003130 PF08447 PAS fold AC731_003130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_003140 PF03772 Competence protein AC731_003140 PF00753 Metallo-beta-lactamase superfamily AC731_003150 PF03193 RsgA GTPase AC731_003160 PF16491 CAAX prenyl protease N-terminal, five membrane helices AC731_003160 PF01435 Peptidase family M48 AC731_003165 PF00929 Exonuclease AC731_003175 PF01197 Ribosomal protein L31 AC731_003180 PF01207 Dihydrouridine synthase (Dus) AC731_003185 PF02390 Putative methyltransferase AC731_003190 PF02810 SEC-C motif AC731_003190 PF03695 Uncharacterised protein family (UPF0149) AC731_003195 PF03692 Putative zinc- or iron-chelating domain AC731_003225 PF11791 Aconitate B N-terminal domain AC731_003225 PF06434 Aconitate hydratase 2 N-terminus AC731_003225 PF00330 Aconitase family (aconitate hydratase) AC731_003230 PF13426 PAS domain AC731_003230 PF08448 PAS fold AC731_003230 PF08447 PAS fold AC731_003230 PF00990 Diguanylate cyclase, GGDEF domain AC731_003230 PF00563 EAL domain AC731_003230 PF05231 MASE1 AC731_003235 PF01497 Periplasmic binding protein AC731_003240 PF00296 Luciferase-like monooxygenase AC731_003250 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC731_003255 PF00528 Binding-protein-dependent transport system inner membrane component AC731_003260 PF00528 Binding-protein-dependent transport system inner membrane component AC731_003265 PF00005 ABC transporter AC731_003270 PF07690 Major Facilitator Superfamily AC731_003275 PF03466 LysR substrate binding domain AC731_003275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_003285 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AC731_003285 PF00056 lactate/malate dehydrogenase, NAD binding domain AC731_003290 PF00392 Bacterial regulatory proteins, gntR family AC731_003290 PF07702 UTRA domain AC731_003305 PF00890 FAD binding domain AC731_003305 PF02910 Fumarate reductase flavoprotein C-term AC731_003310 PF13085 2Fe-2S iron-sulfur cluster binding domain AC731_003315 PF03937 Flavinator of succinate dehydrogenase AC731_003320 PF00285 Citrate synthase, C-terminal domain AC731_003325 PF02779 Transketolase, pyrimidine binding domain AC731_003325 PF16870 2-oxoglutarate dehydrogenase C-terminal AC731_003325 PF00676 Dehydrogenase E1 component AC731_003325 PF16078 2-oxoglutarate dehydrogenase N-terminus AC731_003330 PF02817 e3 binding domain AC731_003330 PF00364 Biotin-requiring enzyme AC731_003330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AC731_003335 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC731_003335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC731_003340 PF03969 AFG1-like ATPase AC731_003365 PF07963 Prokaryotic N-terminal methylation motif AC731_003365 PF11612 Type II secretion system (T2SS), protein J AC731_003370 PF02501 Type II secretion system (T2SS), protein I AC731_003370 PF07963 Prokaryotic N-terminal methylation motif AC731_003380 PF08334 Type II secretion system (T2SS), protein G AC731_003380 PF07963 Prokaryotic N-terminal methylation motif AC731_003385 PF00482 Type II secretion system (T2SS), protein F AC731_003390 PF00437 Type II/IV secretion system protein AC731_003395 PF03958 Bacterial type II/III secretion system short domain AC731_003395 PF00263 Bacterial type II and III secretion system protein AC731_003405 PF04851 Type III restriction enzyme, res subunit AC731_003405 PF13307 Helicase C-terminal domain AC731_003415 PF01593 Flavin containing amine oxidoreductase AC731_003420 PF03441 FAD binding domain of DNA photolyase AC731_003420 PF00875 DNA photolyase AC731_003425 PF00875 DNA photolyase AC731_003425 PF03441 FAD binding domain of DNA photolyase AC731_003505 PF00004 ATPase family associated with various cellular activities (AAA) AC731_003505 PF17758 Proteasomal ATPase OB N-terminal domain AC731_003505 PF16450 Proteasomal ATPase OB C-terminal domain AC731_003540 PF00132 Bacterial transferase hexapeptide (six repeats) AC731_003550 PF00589 Phage integrase family AC731_003550 PF13495 Phage integrase, N-terminal SAM-like domain AC731_003555 PF00589 Phage integrase family AC731_003555 PF02899 Phage integrase, N-terminal SAM-like domain AC731_003590 PF00144 Beta-lactamase AC731_003610 PF00589 Phage integrase family AC731_003610 PF13495 Phage integrase, N-terminal SAM-like domain AC731_003625 PF07690 Major Facilitator Superfamily AC731_003630 PF02909 Tetracyclin repressor-like, C-terminal domain AC731_003630 PF00440 Bacterial regulatory proteins, tetR family AC731_003640 PF07690 Major Facilitator Superfamily AC731_003645 PF00809 Pterin binding enzyme AC731_003650 PF13427 Domain of unknown function (DUF4111) AC731_003650 PF01909 Nucleotidyltransferase domain AC731_003655 PF14319 Transposase zinc-binding domain AC731_003655 PF04986 Putative transposase AC731_003660 PF13495 Phage integrase, N-terminal SAM-like domain AC731_003660 PF00589 Phage integrase family AC731_003665 PF00589 Phage integrase family AC731_003665 PF13495 Phage integrase, N-terminal SAM-like domain AC731_003670 PF13610 DDE domain AC731_003680 PF00239 Resolvase, N terminal domain AC731_003680 PF02796 Helix-turn-helix domain of resolvase AC731_003695 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AC731_003700 PF03453 MoeA N-terminal region (domain I and II) AC731_003700 PF03454 MoeA C-terminal region (domain IV) AC731_003700 PF00994 Probable molybdopterin binding domain AC731_003705 PF02597 ThiS family AC731_003710 PF02391 MoaE protein AC731_003725 PF04536 TPM domain AC731_003730 PF04011 LemA family AC731_003740 PF00255 Glutathione peroxidase AC731_003745 PF03976 Polyphosphate kinase 2 (PPK2) AC731_003750 PF08447 PAS fold AC731_003750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_003750 PF13426 PAS domain AC731_003755 PF07859 alpha/beta hydrolase fold AC731_003765 PF00156 Phosphoribosyl transferase domain AC731_003770 PF14437 MafB19-like deaminase AC731_003775 PF03734 L,D-transpeptidase catalytic domain AC731_003775 PF01476 LysM domain AC731_003780 PF13673 Acetyltransferase (GNAT) domain AC731_003800 PF01571 Aminomethyltransferase folate-binding domain AC731_003805 PF02618 YceG-like family AC731_003810 PF02223 Thymidylate kinase AC731_003815 PF09115 DNA polymerase III, delta subunit, C terminal AC731_003825 PF01026 TatD related DNase AC731_003835 PF00271 Helicase conserved C-terminal domain AC731_003835 PF00270 DEAD/DEAH box helicase AC731_003835 PF03880 DbpA RNA binding domain AC731_003840 PF03831 PhnA domain AC731_003840 PF08274 PhnA Zinc-Ribbon AC731_003850 PF00850 Histone deacetylase domain AC731_003855 PF03023 Lipid II flippase MurJ AC731_003860 PF01649 Ribosomal protein S20 AC731_003870 PF00202 Aminotransferase class-III AC731_003875 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AC731_003875 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AC731_003880 PF00764 Arginosuccinate synthase AC731_003890 PF06865 Pyrimidine/purine nucleoside phosphorylase AC731_003895 PF04461 Protein of unknown function (DUF520) AC731_003910 PF07963 Prokaryotic N-terminal methylation motif AC731_003910 PF00114 Pilin (bacterial filament) AC731_003935 PF05567 Neisseria PilC beta-propeller domain AC731_003955 PF03186 CobD/Cbib protein AC731_003955 PF17113 Regulatory signalling modulator protein AmpE AC731_003960 PF00108 Thiolase, N-terminal domain AC731_003960 PF02803 Thiolase, C-terminal domain AC731_003965 PF01641 SelR domain AC731_003975 PF03618 Kinase/pyrophosphorylase AC731_003980 PF02896 PEP-utilising enzyme, TIM barrel domain AC731_003980 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AC731_003980 PF00391 PEP-utilising enzyme, mobile domain AC731_003985 PF05683 Fumarase C-terminus AC731_003985 PF05681 Fumarate hydratase (Fumerase) AC731_003990 PF00501 AMP-binding enzyme AC731_003990 PF13193 AMP-binding enzyme C-terminal domain AC731_003990 PF16177 Acetyl-coenzyme A synthetase N-terminus AC731_004000 PF00672 HAMP domain AC731_004000 PF00512 His Kinase A (phospho-acceptor) domain AC731_004000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_004000 PF00989 PAS fold AC731_004000 PF18698 Histidine kinase sensor domain AC731_004005 PF00486 Transcriptional regulatory protein, C terminal AC731_004005 PF00072 Response regulator receiver domain AC731_004010 PF00929 Exonuclease AC731_004015 PF00474 Sodium:solute symporter family AC731_004020 PF00563 EAL domain AC731_004020 PF03707 Bacterial signalling protein N terminal repeat AC731_004020 PF00990 Diguanylate cyclase, GGDEF domain AC731_004025 PF00989 PAS fold AC731_004025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_004025 PF00512 His Kinase A (phospho-acceptor) domain AC731_004030 PF00106 short chain dehydrogenase AC731_004035 PF02861 Clp amino terminal domain, pathogenicity island component AC731_004035 PF00004 ATPase family associated with various cellular activities (AAA) AC731_004035 PF10431 C-terminal, D2-small domain, of ClpB protein AC731_004035 PF07724 AAA domain (Cdc48 subfamily) AC731_004035 PF17871 AAA lid domain AC731_004040 PF00563 EAL domain AC731_004040 PF03707 Bacterial signalling protein N terminal repeat AC731_004040 PF00990 Diguanylate cyclase, GGDEF domain AC731_004045 PF13145 PPIC-type PPIASE domain AC731_004060 PF00528 Binding-protein-dependent transport system inner membrane component AC731_004065 PF12911 N-terminal TM domain of oligopeptide transport permease C AC731_004065 PF00528 Binding-protein-dependent transport system inner membrane component AC731_004070 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AC731_004075 PF01668 SmpB protein AC731_004085 PF03658 RnfH family Ubiquitin AC731_004095 PF00478 IMP dehydrogenase / GMP reductase domain AC731_004095 PF00571 CBS domain AC731_004100 PF00117 Glutamine amidotransferase class-I AC731_004100 PF00958 GMP synthase C terminal domain AC731_004100 PF02540 NAD synthase AC731_004125 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system AC731_004135 PF00884 Sulfatase AC731_004140 PF00343 Carbohydrate phosphorylase AC731_004145 PF00534 Glycosyl transferases group 1 AC731_004145 PF08323 Starch synthase catalytic domain AC731_004150 PF00483 Nucleotidyl transferase AC731_004155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AC731_004155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AC731_004155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AC731_004155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AC731_004160 PF00128 Alpha amylase, catalytic domain AC731_004160 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC731_004160 PF18390 Glycogen debranching enzyme C-terminal domain AC731_004165 PF02806 Alpha amylase, C-terminal all-beta domain AC731_004165 PF00128 Alpha amylase, catalytic domain AC731_004165 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AC731_004170 PF00342 Phosphoglucose isomerase AC731_004175 PF02685 Glucokinase AC731_004180 PF02446 4-alpha-glucanotransferase AC731_004185 PF01066 CDP-alcohol phosphatidyltransferase AC731_004200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_004200 PF08447 PAS fold AC731_004200 PF13426 PAS domain AC731_004210 PF02082 Transcriptional regulator AC731_004215 PF00440 Bacterial regulatory proteins, tetR family AC731_004230 PF00005 ABC transporter AC731_004235 PF18381 YcaO cyclodehydratase C-terminal domain AC731_004235 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AC731_004240 PF07729 FCD domain AC731_004240 PF00392 Bacterial regulatory proteins, gntR family AC731_004245 PF02913 FAD linked oxidases, C-terminal domain AC731_004245 PF01565 FAD binding domain AC731_004250 PF01565 FAD binding domain AC731_004255 PF13183 4Fe-4S dicluster domain AC731_004255 PF02754 Cysteine-rich domain AC731_004260 PF03928 Haem-degrading AC731_004265 PF02652 L-lactate permease AC731_004285 PF03707 Bacterial signalling protein N terminal repeat AC731_004285 PF00563 EAL domain AC731_004285 PF00990 Diguanylate cyclase, GGDEF domain AC731_004290 PF13409 Glutathione S-transferase, N-terminal domain AC731_004295 PF03466 LysR substrate binding domain AC731_004295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_004300 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AC731_004305 PF02230 Phospholipase/Carboxylesterase AC731_004380 PF00589 Phage integrase family AC731_004385 PF03776 Septum formation topological specificity factor MinE AC731_004390 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AC731_004395 PF05209 Septum formation inhibitor MinC, N-terminal domain AC731_004395 PF03775 Septum formation inhibitor MinC, C-terminal domain AC731_004400 PF01430 Hsp33 protein AC731_004405 PF03960 ArsC family AC731_004410 PF09371 Tex-like protein N-terminal domain AC731_004410 PF17674 HHH domain AC731_004410 PF16921 Tex protein YqgF-like domain AC731_004410 PF00575 S1 RNA binding domain AC731_004420 PF13380 CoA binding domain AC731_004420 PF13607 Succinyl-CoA ligase like flavodoxin domain AC731_004420 PF00583 Acetyltransferase (GNAT) family AC731_004425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_004425 PF00512 His Kinase A (phospho-acceptor) domain AC731_004425 PF00989 PAS fold AC731_004435 PF00581 Rhodanese-like domain AC731_004440 PF00586 AIR synthase related protein, N-terminal domain AC731_004440 PF02769 AIR synthase related protein, C-terminal domain AC731_004445 PF13472 GDSL-like Lipase/Acylhydrolase family AC731_004450 PF00005 ABC transporter AC731_004460 PF00793 DAHP synthetase I family AC731_004465 PF01544 CorA-like Mg2+ transporter protein AC731_004470 PF03461 TRCF domain AC731_004470 PF00270 DEAD/DEAH box helicase AC731_004470 PF17757 UvrB interaction domain AC731_004470 PF00271 Helicase conserved C-terminal domain AC731_004470 PF02559 CarD-like/TRCF domain AC731_004495 PF01871 AMMECR1 AC731_004500 PF01875 Memo-like protein AC731_004505 PF13194 Domain of unknown function (DUF4010) AC731_004510 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AC731_004515 PF02542 YgbB family AC731_004520 PF02834 LigT like Phosphoesterase AC731_004530 PF03358 NADPH-dependent FMN reductase AC731_004535 PF06167 Glucose-regulated metallo-peptidase M90 AC731_004540 PF00892 EamA-like transporter family AC731_004545 PF13291 ACT domain AC731_004545 PF02824 TGS domain AC731_004545 PF04607 Region found in RelA / SpoT proteins AC731_004550 PF02503 Polyphosphate kinase middle domain AC731_004550 PF13090 Polyphosphate kinase C-terminal domain 2 AC731_004550 PF17941 Polyphosphate kinase C-terminal domain 1 AC731_004550 PF13089 Polyphosphate kinase N-terminal domain AC731_004555 PF02541 Ppx/GppA phosphatase family AC731_004560 PF02405 Permease MlaE AC731_004565 PF00005 ABC transporter AC731_004580 PF00378 Enoyl-CoA hydratase/isomerase AC731_004585 PF01026 TatD related DNase AC731_004590 PF08361 MAATS-type transcriptional repressor, C-terminal region AC731_004590 PF00440 Bacterial regulatory proteins, tetR family AC731_004595 PF01012 Electron transfer flavoprotein domain AC731_004600 PF00766 Electron transfer flavoprotein FAD-binding domain AC731_004600 PF01012 Electron transfer flavoprotein domain AC731_004610 PF02770 Acyl-CoA dehydrogenase, middle domain AC731_004610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC731_004610 PF12806 Acetyl-CoA dehydrogenase C-terminal like AC731_004610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC731_004625 PF03795 YCII-related domain AC731_004630 PF04279 Intracellular septation protein A AC731_004640 PF00753 Metallo-beta-lactamase superfamily AC731_004640 PF16123 Hydroxyacylglutathione hydrolase C-terminus AC731_004645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_004645 PF00672 HAMP domain AC731_004645 PF00512 His Kinase A (phospho-acceptor) domain AC731_004650 PF00072 Response regulator receiver domain AC731_004650 PF00486 Transcriptional regulatory protein, C terminal AC731_004655 PF00814 Glycoprotease family AC731_004665 PF03167 Uracil DNA glycosylase superfamily AC731_004670 PF07690 Major Facilitator Superfamily AC731_004675 PF03466 LysR substrate binding domain AC731_004675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_004680 PF18073 Rubredoxin metal binding domain AC731_004685 PF07715 TonB-dependent Receptor Plug Domain AC731_004685 PF00593 TonB dependent receptor AC731_004690 PF00561 alpha/beta hydrolase fold AC731_004695 PF08042 PqqA family AC731_004700 PF12706 Beta-lactamase superfamily domain AC731_004705 PF03070 TENA/THI-4/PQQC family AC731_004710 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AC731_004715 PF13186 Iron-sulfur cluster-binding domain AC731_004715 PF04055 Radical SAM superfamily AC731_004720 PF00196 Bacterial regulatory proteins, luxR family AC731_004720 PF00072 Response regulator receiver domain AC731_004725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_004725 PF07730 Histidine kinase AC731_004725 PF05231 MASE1 AC731_004745 PF00005 ABC transporter AC731_004750 PF00005 ABC transporter AC731_004775 PF00990 Diguanylate cyclase, GGDEF domain AC731_004775 PF03707 Bacterial signalling protein N terminal repeat AC731_004775 PF00563 EAL domain AC731_004820 PF13360 PQQ-like domain AC731_004840 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal AC731_004845 PF02289 Cyclohydrolase (MCH) AC731_004855 PF08714 Formaldehyde-activating enzyme (Fae) AC731_004910 PF07969 Amidohydrolase family AC731_004915 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase AC731_004915 PF02741 FTR, proximal lobe AC731_004930 PF04715 Anthranilate synthase component I, N terminal region AC731_004930 PF00425 chorismate binding enzyme AC731_004930 PF00117 Glutamine amidotransferase class-I AC731_004945 PF01590 GAF domain AC731_004945 PF02954 Bacterial regulatory protein, Fis family AC731_004945 PF00158 Sigma-54 interaction domain AC731_004955 PF01327 Polypeptide deformylase AC731_004970 PF00483 Nucleotidyl transferase AC731_004970 PF01050 Mannose-6-phosphate isomerase AC731_004975 PF04321 RmlD substrate binding domain AC731_004980 PF16363 GDP-mannose 4,6 dehydratase AC731_004995 PF00005 ABC transporter AC731_004995 PF02687 FtsX-like permease family AC731_004995 PF12704 MacB-like periplasmic core domain AC731_005010 PF01593 Flavin containing amine oxidoreductase AC731_005015 PF00246 Zinc carboxypeptidase AC731_005015 PF18027 Cytosolic carboxypeptidase N-terminal domain AC731_005020 PF03883 Peroxide stress protein YaaA AC731_005030 PF00588 SpoU rRNA Methylase family AC731_005030 PF08032 RNA 2'-O ribose methyltransferase substrate binding AC731_005035 PF01351 Ribonuclease HII AC731_005040 PF02684 Lipid-A-disaccharide synthetase AC731_005045 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AC731_005045 PF00132 Bacterial transferase hexapeptide (six repeats) AC731_005050 PF07977 FabA-like domain AC731_005055 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AC731_005055 PF14602 Hexapeptide repeat of succinyl-transferase AC731_005055 PF00132 Bacterial transferase hexapeptide (six repeats) AC731_005065 PF07244 Surface antigen variable number repeat AC731_005065 PF01103 Surface antigen AC731_005070 PF17820 PDZ domain AC731_005070 PF13180 PDZ domain AC731_005070 PF02163 Peptidase family M50 AC731_005075 PF13288 DXP reductoisomerase C-terminal domain AC731_005075 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AC731_005075 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AC731_005085 PF01255 Putative undecaprenyl diphosphate synthase AC731_005090 PF01765 Ribosome recycling factor AC731_005095 PF00696 Amino acid kinase family AC731_005100 PF00889 Elongation factor TS AC731_005105 PF00318 Ribosomal protein S2 AC731_005110 PF00557 Metallopeptidase family M24 AC731_005115 PF08335 GlnD PII-uridylyltransferase AC731_005115 PF01966 HD domain AC731_005120 PF03350 Uncharacterized protein family, UPF0114 AC731_005125 PF01048 Phosphorylase superfamily AC731_005135 PF00483 Nucleotidyl transferase AC731_005140 PF01653 NAD-dependent DNA ligase adenylation domain AC731_005140 PF12826 Helix-hairpin-helix motif AC731_005140 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AC731_005140 PF03120 NAD-dependent DNA ligase OB-fold domain AC731_005140 PF00533 BRCA1 C Terminus (BRCT) domain AC731_005150 PF02463 RecF/RecN/SMC N terminal domain AC731_005155 PF00155 Aminotransferase class I and II AC731_005160 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AC731_005160 PF14602 Hexapeptide repeat of succinyl-transferase AC731_005160 PF00132 Bacterial transferase hexapeptide (six repeats) AC731_005165 PF00437 Type II/IV secretion system protein AC731_005170 PF01546 Peptidase family M20/M25/M40 AC731_005170 PF07687 Peptidase dimerisation domain AC731_005175 PF05175 Methyltransferase small domain AC731_005180 PF01339 CheB methylesterase AC731_005180 PF00072 Response regulator receiver domain AC731_005185 PF04384 Iron-sulphur cluster assembly AC731_005190 PF00111 2Fe-2S iron-sulfur cluster binding domain AC731_005195 PF00012 Hsp70 protein AC731_005200 PF07743 HSCB C-terminal oligomerisation domain AC731_005205 PF01521 Iron-sulphur cluster biosynthesis AC731_005210 PF01592 NifU-like N terminal domain AC731_005215 PF00266 Aminotransferase class-V AC731_005220 PF00266 Aminotransferase class-V AC731_005225 PF02082 Transcriptional regulator AC731_005230 PF00132 Bacterial transferase hexapeptide (six repeats) AC731_005235 PF00588 SpoU rRNA Methylase family AC731_005240 PF00459 Inositol monophosphatase family AC731_005420 PF17288 Terminase RNAseH like domain AC731_005420 PF04466 Phage terminase large subunit AC731_005470 PF02223 Thymidylate kinase AC731_005520 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system AC731_005565 PF00488 MutS domain V AC731_005565 PF05190 MutS family domain IV AC731_005565 PF05192 MutS domain III AC731_005565 PF05188 MutS domain II AC731_005565 PF01624 MutS domain I AC731_005580 PF00571 CBS domain AC731_005585 PF00929 Exonuclease AC731_005590 PF00075 RNase H AC731_005600 PF00753 Metallo-beta-lactamase superfamily AC731_005600 PF16123 Hydroxyacylglutathione hydrolase C-terminus AC731_005605 PF00196 Bacterial regulatory proteins, luxR family AC731_005605 PF00072 Response regulator receiver domain AC731_005610 PF01464 Transglycosylase SLT domain AC731_005610 PF01476 LysM domain AC731_005615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AC731_005615 PF00005 ABC transporter AC731_005620 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC731_005625 PF00578 AhpC/TSA family AC731_005630 PF08240 Alcohol dehydrogenase GroES-like domain AC731_005635 PF00717 Peptidase S24-like AC731_005635 PF01726 LexA DNA binding domain AC731_005655 PF01554 MatE AC731_005660 PF03960 ArsC family AC731_005675 PF09905 DNA-binding protein VF530 AC731_005680 PF08212 Lipocalin-like domain AC731_005685 PF05958 tRNA (Uracil-5-)-methyltransferase AC731_005700 PF03264 NapC/NirT cytochrome c family, N-terminal region AC731_005705 PF18364 Molybdopterin oxidoreductase N-terminal domain AC731_005705 PF01568 Molydopterin dinucleotide binding domain AC731_005705 PF00384 Molybdopterin oxidoreductase AC731_005710 PF02613 Nitrate reductase delta subunit AC731_005715 PF00360 Phytochrome region AC731_005715 PF00990 Diguanylate cyclase, GGDEF domain AC731_005715 PF01590 GAF domain AC731_005715 PF00563 EAL domain AC731_005735 PF01613 Flavin reductase like domain AC731_005740 PF00155 Aminotransferase class I and II AC731_005750 PF03707 Bacterial signalling protein N terminal repeat AC731_005750 PF00563 EAL domain AC731_005750 PF00990 Diguanylate cyclase, GGDEF domain AC731_005770 PF00582 Universal stress protein family AC731_005770 PF00999 Sodium/hydrogen exchanger family AC731_005800 PF01610 Transposase AC731_005800 PF13542 Helix-turn-helix domain of transposase family ISL3 AC731_005800 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AC731_005810 PF03594 Benzoate membrane transport protein AC731_005815 PF00528 Binding-protein-dependent transport system inner membrane component AC731_005825 PF03459 TOBE domain AC731_005825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_005830 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AC731_005840 PF03741 Integral membrane protein TerC family AC731_005845 PF00970 Oxidoreductase FAD-binding domain AC731_005845 PF00111 2Fe-2S iron-sulfur cluster binding domain AC731_005845 PF00175 Oxidoreductase NAD-binding domain AC731_005855 PF09086 Domain of unknown function (DUF1924) AC731_005870 PF16916 Dimerisation domain of Zinc Transporter AC731_005870 PF01545 Cation efflux family AC731_005875 PF00486 Transcriptional regulatory protein, C terminal AC731_005875 PF00072 Response regulator receiver domain AC731_005880 PF00512 His Kinase A (phospho-acceptor) domain AC731_005880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_005885 PF08019 Phosphoethanolamine transferase EptA/EptB AC731_005885 PF00884 Sulfatase AC731_005905 PF00689 Cation transporting ATPase, C-terminus AC731_005905 PF00690 Cation transporter/ATPase, N-terminus AC731_005920 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AC731_005925 PF00111 2Fe-2S iron-sulfur cluster binding domain AC731_005925 PF01799 [2Fe-2S] binding domain AC731_005940 PF01219 Prokaryotic diacylglycerol kinase AC731_005945 PF01569 PAP2 superfamily AC731_005950 PF03109 ABC1 family AC731_005960 PF02954 Bacterial regulatory protein, Fis family AC731_005960 PF00072 Response regulator receiver domain AC731_005960 PF00158 Sigma-54 interaction domain AC731_005970 PF02146 Sir2 family AC731_006015 PF08401 Domain of unknown function (DUF1738) AC731_006015 PF13362 Toprim domain AC731_006015 PF18818 Metallopeptidase superfamily domain AC731_006045 PF00589 Phage integrase family AC731_006045 PF13356 Arm DNA-binding domain AC731_006055 PF00216 Bacterial DNA-binding protein AC731_006060 PF00004 ATPase family associated with various cellular activities (AAA) AC731_006060 PF05362 Lon protease (S16) C-terminal proteolytic domain AC731_006060 PF02190 ATP-dependent protease La (LON) substrate-binding domain AC731_006065 PF10431 C-terminal, D2-small domain, of ClpB protein AC731_006065 PF06689 ClpX C4-type zinc finger AC731_006065 PF07724 AAA domain (Cdc48 subfamily) AC731_006070 PF00574 Clp protease AC731_006075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC731_006075 PF05698 Bacterial trigger factor protein (TF) C-terminus AC731_006075 PF05697 Bacterial trigger factor protein (TF) AC731_006080 PF08298 PrkA AAA domain AC731_006080 PF06798 PrkA serine protein kinase C-terminal domain AC731_006085 PF04285 Protein of unknown function (DUF444) AC731_006090 PF04293 SpoVR like protein AC731_006095 PF03853 YjeF-related protein N-terminus AC731_006095 PF01256 Carbohydrate kinase AC731_006105 PF00892 EamA-like transporter family AC731_006110 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AC731_006110 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AC731_006120 PF00291 Pyridoxal-phosphate dependent enzyme AC731_006120 PF14821 Threonine synthase N terminus AC731_006130 PF07311 Dodecin AC731_006135 PF03473 MOSC domain AC731_006135 PF03475 3-alpha domain AC731_006140 PF01842 ACT domain AC731_006140 PF00742 Homoserine dehydrogenase AC731_006140 PF03447 Homoserine dehydrogenase, NAD binding domain AC731_006145 PF00155 Aminotransferase class I and II AC731_006155 PF00578 AhpC/TSA family AC731_006160 PF02562 PhoH-like protein AC731_006160 PF13638 PIN domain AC731_006175 PF00877 NlpC/P60 family AC731_006185 PF13416 Bacterial extracellular solute-binding protein AC731_006190 PF00072 Response regulator receiver domain AC731_006190 PF00990 Diguanylate cyclase, GGDEF domain AC731_006195 PF00528 Binding-protein-dependent transport system inner membrane component AC731_006200 PF00005 ABC transporter AC731_006200 PF08402 TOBE domain AC731_006205 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AC731_006210 PF04377 Arginine-tRNA-protein transferase, C terminus AC731_006210 PF04376 Arginine-tRNA-protein transferase, N terminus AC731_006215 PF01180 Dihydroorotate dehydrogenase AC731_006220 PF02608 ABC transporter substrate-binding protein PnrA-like AC731_006230 PF00034 Cytochrome c AC731_006235 PF00115 Cytochrome C and Quinol oxidase polypeptide I AC731_006240 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AC731_006240 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AC731_006245 PF08448 PAS fold AC731_006245 PF00990 Diguanylate cyclase, GGDEF domain AC731_006250 PF00510 Cytochrome c oxidase subunit III AC731_006260 PF08406 CbbQ/NirQ/NorQ C-terminal AC731_006260 PF07728 AAA domain (dynein-related subfamily) AC731_006285 PF13426 PAS domain AC731_006285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_006285 PF08447 PAS fold AC731_006290 PF04940 Sensors of blue-light using FAD AC731_006290 PF00563 EAL domain AC731_006305 PF06463 Molybdenum Cofactor Synthesis C AC731_006305 PF04055 Radical SAM superfamily AC731_006315 PF17805 AsnC-like ligand binding domain AC731_006320 PF13404 AsnC-type helix-turn-helix domain AC731_006320 PF17805 AsnC-like ligand binding domain AC731_006325 PF17805 AsnC-like ligand binding domain AC731_006335 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AC731_006345 PF09459 Ethylbenzene dehydrogenase AC731_006350 PF03264 NapC/NirT cytochrome c family, N-terminal region AC731_006355 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AC731_006375 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AC731_006375 PF00034 Cytochrome c AC731_006525 PF17288 Terminase RNAseH like domain AC731_006525 PF04466 Phage terminase large subunit AC731_006575 PF00717 Peptidase S24-like AC731_006625 PF04381 Putative exonuclease, RdgC AC731_006630 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system AC731_006695 PF01541 GIY-YIG catalytic domain AC731_006695 PF02151 UvrB/uvrC motif AC731_006695 PF08459 UvrC Helix-hairpin-helix N-terminal AC731_006700 PF00933 Glycosyl hydrolase family 3 N terminal domain AC731_006705 PF01648 4'-phosphopantetheinyl transferase superfamily AC731_006710 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AC731_006715 PF11967 Recombination protein O N terminal AC731_006715 PF02565 Recombination protein O C terminal AC731_006720 PF07650 KH domain AC731_006720 PF01926 50S ribosome-binding GTPase AC731_006725 PF00035 Double-stranded RNA binding motif AC731_006725 PF14622 Ribonuclease-III-like AC731_006735 PF10502 Signal peptidase, peptidase S26 AC731_006740 PF03144 Elongation factor Tu domain 2 AC731_006740 PF00009 Elongation factor Tu GTP binding domain AC731_006740 PF00679 Elongation factor G C-terminus AC731_006740 PF06421 GTP-binding protein LepA C-terminus AC731_006750 PF13180 PDZ domain AC731_006760 PF17188 MucB/RseB C-terminal domain AC731_006760 PF03888 MucB/RseB N-terminal domain AC731_006770 PF08281 Sigma-70, region 4 AC731_006770 PF04542 Sigma-70 region 2 AC731_006775 PF02910 Fumarate reductase flavoprotein C-term AC731_006775 PF00890 FAD binding domain AC731_006785 PF00109 Beta-ketoacyl synthase, N-terminal domain AC731_006785 PF02801 Beta-ketoacyl synthase, C-terminal domain AC731_006790 PF00550 Phosphopantetheine attachment site AC731_006800 PF00698 Acyl transferase domain AC731_006805 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AC731_006805 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AC731_006810 PF02504 Fatty acid synthesis protein AC731_006815 PF01783 Ribosomal L32p protein family AC731_006825 PF02545 Maf-like protein AC731_006830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AC731_006840 PF01479 S4 domain AC731_006840 PF00849 RNA pseudouridylate synthase AC731_006845 PF10150 Ribonuclease E/G family AC731_006845 PF12111 Polyribonucleotide phosphorylase C terminal AC731_006845 PF00575 S1 RNA binding domain AC731_006850 PF01451 Low molecular weight phosphotyrosine protein phosphatase AC731_006855 PF12344 Ultra-violet resistance protein B AC731_006855 PF04851 Type III restriction enzyme, res subunit AC731_006855 PF17757 UvrB interaction domain AC731_006855 PF00271 Helicase conserved C-terminal domain AC731_006855 PF02151 UvrB/uvrC motif AC731_006860 PF00155 Aminotransferase class I and II AC731_006880 PF00512 His Kinase A (phospho-acceptor) domain AC731_006880 PF00072 Response regulator receiver domain AC731_006880 PF01627 Hpt domain AC731_006880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_006885 PF00072 Response regulator receiver domain AC731_006895 PF09997 Predicted membrane protein (DUF2238) AC731_006905 PF05362 Lon protease (S16) C-terminal proteolytic domain AC731_006905 PF13654 AAA domain AC731_006910 PF06463 Molybdenum Cofactor Synthesis C AC731_006910 PF04055 Radical SAM superfamily AC731_006925 PF08240 Alcohol dehydrogenase GroES-like domain AC731_006925 PF00107 Zinc-binding dehydrogenase AC731_006935 PF00534 Glycosyl transferases group 1 AC731_006935 PF13439 Glycosyltransferase Family 4 AC731_006955 PF00216 Bacterial DNA-binding protein AC731_007000 PF01471 Putative peptidoglycan binding domain AC731_007000 PF13401 AAA domain AC731_007100 PF03237 Terminase-like family AC731_007220 PF01872 RibD C-terminal domain AC731_007225 PF00925 GTP cyclohydrolase II AC731_007240 PF02254 TrkA-N domain AC731_007240 PF02080 TrkA-C domain AC731_007245 PF02386 Cation transport protein AC731_007250 PF01370 NAD dependent epimerase/dehydratase family AC731_007250 PF02222 ATP-grasp domain AC731_007255 PF03480 Bacterial extracellular solute-binding protein, family 7 AC731_007270 PF03466 LysR substrate binding domain AC731_007270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_007290 PF01546 Peptidase family M20/M25/M40 AC731_007290 PF07687 Peptidase dimerisation domain AC731_007295 PF03466 LysR substrate binding domain AC731_007295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_007300 PF00175 Oxidoreductase NAD-binding domain AC731_007300 PF00970 Oxidoreductase FAD-binding domain AC731_007305 PF00255 Glutathione peroxidase AC731_007310 PF00005 ABC transporter AC731_007310 PF12848 ABC transporter AC731_007325 PF01258 Prokaryotic dksA/traR C4-type zinc finger AC731_007330 PF00575 S1 RNA binding domain AC731_007330 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AC731_007330 PF01138 3' exoribonuclease family, domain 1 AC731_007330 PF00013 KH domain AC731_007330 PF03725 3' exoribonuclease family, domain 2 AC731_007335 PF00312 Ribosomal protein S15 AC731_007340 PF16198 tRNA pseudouridylate synthase B C-terminal domain AC731_007340 PF09157 Pseudouridine synthase II TruB, C-terminal AC731_007340 PF01509 TruB family pseudouridylate synthase (N terminal domain) AC731_007345 PF02033 Ribosome-binding factor A AC731_007350 PF08364 Bacterial translation initiation factor IF-2 associated region AC731_007350 PF04760 Translation initiation factor IF-2, N-terminal region AC731_007350 PF11987 Translation-initiation factor 2 AC731_007350 PF00009 Elongation factor Tu GTP binding domain AC731_007355 PF13184 NusA-like KH domain AC731_007355 PF08529 NusA N-terminal domain AC731_007360 PF17384 RimP C-terminal SH3 domain AC731_007360 PF02576 RimP N-terminal domain AC731_007365 PF01479 S4 domain AC731_007365 PF00849 RNA pseudouridylate synthase AC731_007370 PF04079 Segregation and condensation complex subunit ScpB AC731_007375 PF02616 Segregation and condensation protein ScpA AC731_007380 PF02163 Peptidase family M50 AC731_007385 PF01300 Telomere recombination AC731_007390 PF02811 PHP domain AC731_007395 PF00561 alpha/beta hydrolase fold AC731_007405 PF01926 50S ribosome-binding GTPase AC731_007410 PF00313 'Cold-shock' DNA-binding domain AC731_007415 PF00270 DEAD/DEAH box helicase AC731_007415 PF03880 DbpA RNA binding domain AC731_007415 PF00271 Helicase conserved C-terminal domain AC731_007425 PF00563 EAL domain AC731_007425 PF00990 Diguanylate cyclase, GGDEF domain AC731_007425 PF03707 Bacterial signalling protein N terminal repeat AC731_007435 PF07152 YaeQ protein AC731_007460 PF01227 GTP cyclohydrolase I AC731_007470 PF01384 Phosphate transporter family AC731_007480 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AC731_007485 PF00132 Bacterial transferase hexapeptide (six repeats) AC731_007505 PF04977 Septum formation initiator AC731_007510 PF00113 Enolase, C-terminal TIM barrel domain AC731_007510 PF03952 Enolase, N-terminal domain AC731_007515 PF00793 DAHP synthetase I family AC731_007520 PF00117 Glutamine amidotransferase class-I AC731_007520 PF06418 CTP synthase N-terminus AC731_007530 PF00501 AMP-binding enzyme AC731_007530 PF13193 AMP-binding enzyme C-terminal domain AC731_007535 PF03061 Thioesterase superfamily AC731_007560 PF03707 Bacterial signalling protein N terminal repeat AC731_007560 PF00563 EAL domain AC731_007560 PF00990 Diguanylate cyclase, GGDEF domain AC731_007565 PF01966 HD domain AC731_007570 PF02769 AIR synthase related protein, C-terminal domain AC731_007570 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AC731_007570 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AC731_007580 PF01695 IstB-like ATP binding protein AC731_007585 PF00665 Integrase core domain AC731_007620 PF01571 Aminomethyltransferase folate-binding domain AC731_007620 PF08669 Glycine cleavage T-protein C-terminal barrel domain AC731_007625 PF01597 Glycine cleavage H-protein AC731_007630 PF02347 Glycine cleavage system P-protein AC731_007640 PF00535 Glycosyl transferase family 2 AC731_007640 PF07238 PilZ domain AC731_007640 PF03552 Cellulose synthase AC731_007645 PF00939 Sodium:sulfate symporter transmembrane region AC731_007650 PF00365 Phosphofructokinase AC731_007655 PF05191 Adenylate kinase, active site lid AC731_007660 PF02348 Cytidylyltransferase AC731_007665 PF03966 Trm112p-like protein AC731_007670 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AC731_007675 PF02472 Biopolymer transport protein ExbD/TolR AC731_007680 PF01618 MotA/TolQ/ExbB proton channel family AC731_007685 PF13742 OB-fold nucleic acid binding domain AC731_007685 PF02601 Exonuclease VII, large subunit AC731_007690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AC731_007690 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AC731_007695 PF00849 RNA pseudouridylate synthase AC731_007700 PF00923 Transaldolase/Fructose-6-phosphate aldolase AC731_007705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_007705 PF01627 Hpt domain AC731_007705 PF02895 Signal transducing histidine kinase, homodimeric domain AC731_007705 PF09078 CheY binding AC731_007705 PF01584 CheW-like domain AC731_007710 PF04344 Chemotaxis phosphatase, CheZ AC731_007715 PF00072 Response regulator receiver domain AC731_007720 PF01584 CheW-like domain AC731_007720 PF00072 Response regulator receiver domain AC731_007725 PF01584 CheW-like domain AC731_007725 PF00072 Response regulator receiver domain AC731_007735 PF01618 MotA/TolQ/ExbB proton channel family AC731_007740 PF05280 Flagellar transcriptional activator (FlhC) AC731_007745 PF05247 Flagellar transcriptional activator (FlhD) AC731_007750 PF00990 Diguanylate cyclase, GGDEF domain AC731_007750 PF00072 Response regulator receiver domain AC731_007760 PF02508 Rnf-Nqr subunit, membrane protein AC731_007765 PF04060 Putative Fe-S cluster AC731_007770 PF13237 4Fe-4S dicluster domain AC731_007770 PF10531 SLBB domain AC731_007770 PF13375 RnfC Barrel sandwich hybrid domain AC731_007770 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AC731_007775 PF03116 NQR2, RnfD, RnfE family AC731_007780 PF04205 FMN-binding domain AC731_007785 PF02508 Rnf-Nqr subunit, membrane protein AC731_007790 PF00633 Helix-hairpin-helix motif AC731_007790 PF10576 Iron-sulfur binding domain of endonuclease III AC731_007790 PF00730 HhH-GPD superfamily base excision DNA repair protein AC731_007805 PF00486 Transcriptional regulatory protein, C terminal AC731_007805 PF00072 Response regulator receiver domain AC731_007810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_007810 PF08918 PhoQ Sensor AC731_007825 PF00175 Oxidoreductase NAD-binding domain AC731_007825 PF00111 2Fe-2S iron-sulfur cluster binding domain AC731_007825 PF00970 Oxidoreductase FAD-binding domain AC731_007835 PF00873 AcrB/AcrD/AcrF family AC731_007840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC731_007840 PF00529 HlyD membrane-fusion protein of T1SS AC731_007855 PF00072 Response regulator receiver domain AC731_007855 PF00486 Transcriptional regulatory protein, C terminal AC731_007860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_007860 PF00672 HAMP domain AC731_007860 PF00512 His Kinase A (phospho-acceptor) domain AC731_007870 PF00730 HhH-GPD superfamily base excision DNA repair protein AC731_007870 PF06029 AlkA N-terminal domain AC731_007875 PF04055 Radical SAM superfamily AC731_007880 PF00034 Cytochrome c AC731_007885 PF00034 Cytochrome c AC731_007890 PF01434 Peptidase family M41 AC731_007890 PF00004 ATPase family associated with various cellular activities (AAA) AC731_007890 PF17862 AAA+ lid domain AC731_007905 PF07690 Major Facilitator Superfamily AC731_007920 PF00072 Response regulator receiver domain AC731_007920 PF00990 Diguanylate cyclase, GGDEF domain AC731_007925 PF01274 Malate synthase AC731_007930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AC731_007930 PF00037 4Fe-4S binding domain AC731_007930 PF00384 Molybdopterin oxidoreductase AC731_007930 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AC731_007930 PF01568 Molydopterin dinucleotide binding domain AC731_007935 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AC731_007935 PF10531 SLBB domain AC731_007935 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AC731_007945 PF03466 LysR substrate binding domain AC731_007945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_007950 PF01494 FAD binding domain AC731_007950 PF07976 Phenol hydroxylase, C-terminal dimerisation domain AC731_007955 PF01557 Fumarylacetoacetate (FAA) hydrolase family AC731_007960 PF03480 Bacterial extracellular solute-binding protein, family 7 AC731_007965 PF05343 M42 glutamyl aminopeptidase AC731_007970 PF02875 Mur ligase family, glutamate ligase domain AC731_007970 PF08245 Mur ligase middle domain AC731_007970 PF08443 RimK-like ATP-grasp domain AC731_007975 PF13537 Glutamine amidotransferase domain AC731_007975 PF00733 Asparagine synthase AC731_007985 PF13847 Methyltransferase domain AC731_007990 PF00512 His Kinase A (phospho-acceptor) domain AC731_007990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_007990 PF01627 Hpt domain AC731_007990 PF00072 Response regulator receiver domain AC731_007995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_007995 PF00512 His Kinase A (phospho-acceptor) domain AC731_007995 PF09308 LuxQ, periplasmic AC731_007995 PF00072 Response regulator receiver domain AC731_008000 PF00440 Bacterial regulatory proteins, tetR family AC731_008000 PF13977 BetI-type transcriptional repressor, C-terminal AC731_008005 PF02233 NAD(P) transhydrogenase beta subunit AC731_008010 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AC731_008015 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AC731_008015 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AC731_008030 PF00106 short chain dehydrogenase AC731_008035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_008035 PF00672 HAMP domain AC731_008035 PF17200 Single Cache domain 2 AC731_008045 PF01012 Electron transfer flavoprotein domain AC731_008045 PF00766 Electron transfer flavoprotein FAD-binding domain AC731_008050 PF01012 Electron transfer flavoprotein domain AC731_008060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AC731_008070 PF00175 Oxidoreductase NAD-binding domain AC731_008070 PF00111 2Fe-2S iron-sulfur cluster binding domain AC731_008070 PF00970 Oxidoreductase FAD-binding domain AC731_008075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC731_008075 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AC731_008090 PF12833 Helix-turn-helix domain AC731_008095 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AC731_008095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AC731_008110 PF00440 Bacterial regulatory proteins, tetR family AC731_008115 PF02803 Thiolase, C-terminal domain AC731_008115 PF00108 Thiolase, N-terminal domain AC731_008120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC731_008120 PF00378 Enoyl-CoA hydratase/isomerase AC731_008120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC731_008130 PF02770 Acyl-CoA dehydrogenase, middle domain AC731_008130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC731_008130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC731_008135 PF02515 CoA-transferase family III AC731_008140 PF00501 AMP-binding enzyme AC731_008140 PF13193 AMP-binding enzyme C-terminal domain AC731_008145 PF05962 HutD AC731_008150 PF03616 Sodium/glutamate symporter AC731_008155 PF00491 Arginase family AC731_008170 PF07044 Protein of unknown function (DUF1329) AC731_008175 PF13193 AMP-binding enzyme C-terminal domain AC731_008175 PF00501 AMP-binding enzyme AC731_008180 PF00753 Metallo-beta-lactamase superfamily AC731_008180 PF16123 Hydroxyacylglutathione hydrolase C-terminus AC731_008195 PF00171 Aldehyde dehydrogenase family AC731_008200 PF00732 GMC oxidoreductase AC731_008200 PF05199 GMC oxidoreductase AC731_008205 PF00881 Nitroreductase family AC731_008210 PF00378 Enoyl-CoA hydratase/isomerase AC731_008225 PF08359 YsiA-like protein, C-terminal region AC731_008225 PF00440 Bacterial regulatory proteins, tetR family AC731_008235 PF00501 AMP-binding enzyme AC731_008235 PF13193 AMP-binding enzyme C-terminal domain AC731_008245 PF04055 Radical SAM superfamily AC731_008245 PF13186 Iron-sulfur cluster-binding domain AC731_008250 PF00884 Sulfatase AC731_008255 PF17863 AAA lid domain AC731_008255 PF07726 ATPase family associated with various cellular activities (AAA) AC731_008275 PF07584 Aerotolerance regulator N-terminal AC731_008275 PF13519 von Willebrand factor type A domain AC731_008300 PF02770 Acyl-CoA dehydrogenase, middle domain AC731_008300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC731_008300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC731_008305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC731_008305 PF02770 Acyl-CoA dehydrogenase, middle domain AC731_008305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC731_008310 PF00108 Thiolase, N-terminal domain AC731_008310 PF02803 Thiolase, C-terminal domain AC731_008335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_008335 PF03466 LysR substrate binding domain AC731_008340 PF00576 HIUase/Transthyretin family AC731_008350 PF01014 Uricase AC731_008350 PF09349 OHCU decarboxylase AC731_008360 PF03561 Allantoicase repeat AC731_008365 PF04115 Ureidoglycolate lyase AC731_008370 PF00596 Class II Aldolase and Adducin N-terminal domain AC731_008375 PF01361 Tautomerase enzyme AC731_008380 PF00860 Permease family AC731_008390 PF00196 Bacterial regulatory proteins, luxR family AC731_008390 PF00072 Response regulator receiver domain AC731_008395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_008395 PF13426 PAS domain AC731_008395 PF08448 PAS fold AC731_008395 PF00072 Response regulator receiver domain AC731_008395 PF00512 His Kinase A (phospho-acceptor) domain AC731_008400 PF00892 EamA-like transporter family AC731_008405 PF03466 LysR substrate binding domain AC731_008405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_008415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC731_008415 PF00205 Thiamine pyrophosphate enzyme, central domain AC731_008415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC731_008420 PF01261 Xylose isomerase-like TIM barrel AC731_008425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AC731_008425 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AC731_008435 PF13660 Domain of unknown function (DUF4147) AC731_008435 PF05161 MOFRL family AC731_008440 PF03928 Haem-degrading AC731_008445 PF00224 Pyruvate kinase, barrel domain AC731_008445 PF02887 Pyruvate kinase, alpha/beta domain AC731_008465 PF01425 Amidase AC731_008475 PF02803 Thiolase, C-terminal domain AC731_008475 PF00108 Thiolase, N-terminal domain AC731_008480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC731_008480 PF02770 Acyl-CoA dehydrogenase, middle domain AC731_008480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC731_008485 PF02770 Acyl-CoA dehydrogenase, middle domain AC731_008485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC731_008485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC731_008490 PF00378 Enoyl-CoA hydratase/isomerase AC731_008500 PF00378 Enoyl-CoA hydratase/isomerase AC731_008510 PF01144 Coenzyme A transferase AC731_008515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AC731_008530 PF01039 Carboxyl transferase domain AC731_008535 PF00440 Bacterial regulatory proteins, tetR family AC731_008540 PF07859 alpha/beta hydrolase fold AC731_008545 PF00743 Flavin-binding monooxygenase-like AC731_008560 PF13360 PQQ-like domain AC731_008560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AC731_008570 PF00501 AMP-binding enzyme AC731_008570 PF13193 AMP-binding enzyme C-terminal domain AC731_008585 PF07690 Major Facilitator Superfamily AC731_008590 PF12697 Alpha/beta hydrolase family AC731_008595 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AC731_008595 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC731_008620 PF04542 Sigma-70 region 2 AC731_008620 PF08281 Sigma-70, region 4 AC731_008625 PF03358 NADPH-dependent FMN reductase AC731_008630 PF03960 ArsC family AC731_008650 PF00881 Nitroreductase family AC731_008650 PF01996 F420-0:Gamma-glutamyl ligase AC731_008670 PF01507 Phosphoadenosine phosphosulfate reductase family AC731_008675 PF00009 Elongation factor Tu GTP binding domain AC731_008680 PF00459 Inositol monophosphatase family AC731_008705 PF00296 Luciferase-like monooxygenase AC731_008725 PF00132 Bacterial transferase hexapeptide (six repeats) AC731_008730 PF07690 Major Facilitator Superfamily AC731_008740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC731_008740 PF02770 Acyl-CoA dehydrogenase, middle domain AC731_008740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC731_008745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC731_008745 PF02770 Acyl-CoA dehydrogenase, middle domain AC731_008745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC731_008750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC731_008750 PF02770 Acyl-CoA dehydrogenase, middle domain AC731_008750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC731_008765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC731_008765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC731_008795 PF03449 Transcription elongation factor, N-terminal AC731_008795 PF01272 Transcription elongation factor, GreA/GreB, C-term AC731_008805 PF13593 SBF-like CPA transporter family (DUF4137) AC731_008815 PF00378 Enoyl-CoA hydratase/isomerase AC731_008820 PF00106 short chain dehydrogenase AC731_008825 PF13426 PAS domain AC731_008825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_008825 PF08447 PAS fold AC731_008830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AC731_008830 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC731_008835 PF13193 AMP-binding enzyme C-terminal domain AC731_008835 PF00501 AMP-binding enzyme AC731_008845 PF00890 FAD binding domain AC731_008850 PF00890 FAD binding domain AC731_008880 PF00171 Aldehyde dehydrogenase family AC731_008885 PF01613 Flavin reductase like domain AC731_008895 PF01557 Fumarylacetoacetate (FAA) hydrolase family AC731_008900 PF01118 Semialdehyde dehydrogenase, NAD binding domain AC731_008900 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AC731_008905 PF07836 DmpG-like communication domain AC731_008905 PF00682 HMGL-like AC731_008910 PF07690 Major Facilitator Superfamily AC731_008920 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AC731_008920 PF13542 Helix-turn-helix domain of transposase family ISL3 AC731_008920 PF01610 Transposase AC731_008955 PF00155 Aminotransferase class I and II AC731_008955 PF00392 Bacterial regulatory proteins, gntR family AC731_008960 PF00990 Diguanylate cyclase, GGDEF domain AC731_008960 PF03707 Bacterial signalling protein N terminal repeat AC731_008960 PF00563 EAL domain AC731_008990 PF02899 Phage integrase, N-terminal SAM-like domain AC731_008990 PF00589 Phage integrase family AC731_009015 PF13340 Putative transposase of IS4/5 family (DUF4096) AC731_009025 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AC731_009030 PF00665 Integrase core domain AC731_009030 PF13333 Integrase core domain AC731_009030 PF13276 HTH-like domain AC731_009075 PF01242 6-pyruvoyl tetrahydropterin synthase AC731_009080 PF03458 UPF0126 domain AC731_009085 PF07687 Peptidase dimerisation domain AC731_009085 PF01546 Peptidase family M20/M25/M40 AC731_009105 PF13091 PLD-like domain AC731_009110 PF01189 16S rRNA methyltransferase RsmB/F AC731_009110 PF01029 NusB family AC731_009120 PF00551 Formyl transferase AC731_009130 PF08676 MutL C terminal dimerisation domain AC731_009130 PF01119 DNA mismatch repair protein, C-terminal domain AC731_009135 PF09335 SNARE associated Golgi protein AC731_009140 PF00990 Diguanylate cyclase, GGDEF domain AC731_009140 PF00563 EAL domain AC731_009140 PF03707 Bacterial signalling protein N terminal repeat AC731_009160 PF00873 AcrB/AcrD/AcrF family AC731_009165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC731_009210 PF00586 AIR synthase related protein, N-terminal domain AC731_009210 PF02769 AIR synthase related protein, C-terminal domain AC731_009215 PF01594 AI-2E family transporter AC731_009220 PF00308 Bacterial dnaA protein AC731_009220 PF08299 Bacterial dnaA protein helix-turn-helix AC731_009230 PF01743 Poly A polymerase head domain AC731_009230 PF12626 Polymerase A arginine-rich C-terminus AC731_009230 PF12627 Probable RNA and SrmB- binding site of polymerase A AC731_009235 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AC731_009245 PF01712 Deoxynucleoside kinase AC731_009250 PF02548 Ketopantoate hydroxymethyltransferase AC731_009255 PF02569 Pantoate-beta-alanine ligase AC731_009260 PF00571 CBS domain AC731_009260 PF00478 IMP dehydrogenase / GMP reductase domain AC731_009265 PF01433 Peptidase family M1 domain AC731_009265 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AC731_009265 PF11940 Domain of unknown function (DUF3458) Ig-like fold AC731_009275 PF02254 TrkA-N domain AC731_009275 PF00999 Sodium/hydrogen exchanger family AC731_009280 PF00689 Cation transporting ATPase, C-terminus AC731_009280 PF00690 Cation transporter/ATPase, N-terminus AC731_009290 PF00205 Thiamine pyrophosphate enzyme, central domain AC731_009290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC731_009290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC731_009295 PF10369 Small subunit of acetolactate synthase AC731_009300 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AC731_009300 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AC731_009305 PF01066 CDP-alcohol phosphatidyltransferase AC731_009310 PF08502 LeuA allosteric (dimerisation) domain AC731_009310 PF00682 HMGL-like AC731_009320 PF03358 NADPH-dependent FMN reductase AC731_009325 PF03631 Virulence factor BrkB AC731_009335 PF00886 Ribosomal protein S16 AC731_009340 PF01782 RimM N-terminal domain AC731_009340 PF05239 PRC-barrel domain AC731_009345 PF01746 tRNA (Guanine-1)-methyltransferase AC731_009350 PF01245 Ribosomal protein L19 AC731_009360 PF03739 Lipopolysaccharide export system permease LptF/LptG AC731_009365 PF02789 Cytosol aminopeptidase family, N-terminal domain AC731_009365 PF00883 Cytosol aminopeptidase family, catalytic domain AC731_009380 PF08264 Anticodon-binding domain of tRNA AC731_009380 PF00133 tRNA synthetases class I (I, L, M and V) AC731_009380 PF10458 Valyl tRNA synthetase tRNA binding arm AC731_009385 PF01206 Sulfurtransferase TusA AC731_009390 PF01435 Peptidase family M48 AC731_009395 PF01967 MoaC family AC731_009400 PF00589 Phage integrase family AC731_009525 PF00989 PAS fold AC731_009525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_009525 PF00512 His Kinase A (phospho-acceptor) domain AC731_009525 PF16736 Single Cache-like AC731_009530 PF00072 Response regulator receiver domain AC731_009530 PF00486 Transcriptional regulatory protein, C terminal AC731_009545 PF00005 ABC transporter AC731_009550 PF00528 Binding-protein-dependent transport system inner membrane component AC731_009570 PF04324 BFD-like [2Fe-2S] binding domain AC731_009570 PF18267 Rubredoxin NAD+ reductase C-terminal domain AC731_009570 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AC731_009570 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC731_009575 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain AC731_009575 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AC731_009585 PF01590 GAF domain AC731_009585 PF02954 Bacterial regulatory protein, Fis family AC731_009585 PF00158 Sigma-54 interaction domain AC731_009595 PF00171 Aldehyde dehydrogenase family AC731_009635 PF00141 Peroxidase AC731_009640 PF00202 Aminotransferase class-III AC731_009645 PF00155 Aminotransferase class I and II AC731_009655 PF06968 Biotin and Thiamin Synthesis associated domain AC731_009655 PF04055 Radical SAM superfamily AC731_009660 PF00067 Cytochrome P450 AC731_009665 PF00012 Hsp70 protein AC731_009700 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AC731_009700 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AC731_009705 PF03466 LysR substrate binding domain AC731_009705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_009715 PF01594 AI-2E family transporter AC731_009725 PF03477 ATP cone domain AC731_009725 PF02867 Ribonucleotide reductase, barrel domain AC731_009725 PF00317 Ribonucleotide reductase, all-alpha domain AC731_009730 PF00268 Ribonucleotide reductase, small chain AC731_009735 PF00384 Molybdopterin oxidoreductase AC731_009735 PF18364 Molybdopterin oxidoreductase N-terminal domain AC731_009735 PF01568 Molydopterin dinucleotide binding domain AC731_009740 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AC731_009745 PF00672 HAMP domain AC731_009745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_009745 PF00512 His Kinase A (phospho-acceptor) domain AC731_009745 PF01627 Hpt domain AC731_009745 PF00072 Response regulator receiver domain AC731_009750 PF00072 Response regulator receiver domain AC731_009750 PF00486 Transcriptional regulatory protein, C terminal AC731_009755 PF00171 Aldehyde dehydrogenase family AC731_009760 PF00793 DAHP synthetase I family AC731_009765 PF00174 Oxidoreductase molybdopterin binding domain AC731_009770 PF01794 Ferric reductase like transmembrane component AC731_009775 PF05175 Methyltransferase small domain AC731_009780 PF00994 Probable molybdopterin binding domain AC731_009785 PF04751 Protein of unknown function (DUF615) AC731_009790 PF01523 Putative modulator of DNA gyrase AC731_009795 PF03480 Bacterial extracellular solute-binding protein, family 7 AC731_009800 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC731_009810 PF00300 Histidine phosphatase superfamily (branch 1) AC731_009815 PF03480 Bacterial extracellular solute-binding protein, family 7 AC731_009825 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC731_009830 PF00464 Serine hydroxymethyltransferase AC731_009835 PF03477 ATP cone domain AC731_009840 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AC731_009840 PF01872 RibD C-terminal domain AC731_009845 PF00899 ThiF family AC731_009855 PF03572 Peptidase family S41 AC731_009855 PF13180 PDZ domain AC731_009860 PF01551 Peptidase family M23 AC731_009870 PF00581 Rhodanese-like domain AC731_009875 PF00462 Glutaredoxin AC731_009880 PF02556 Preprotein translocase subunit SecB AC731_009890 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AC731_009890 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AC731_009895 PF00588 SpoU rRNA Methylase family AC731_009905 PF08241 Methyltransferase domain AC731_009920 PF00490 Delta-aminolevulinic acid dehydratase AC731_009925 PF01926 50S ribosome-binding GTPase AC731_009930 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AC731_009935 PF05140 ResB-like family AC731_009940 PF01578 Cytochrome C assembly protein AC731_009945 PF04305 Protein of unknown function (DUF455) AC731_009950 PF03454 MoeA C-terminal region (domain IV) AC731_009950 PF00994 Probable molybdopterin binding domain AC731_009950 PF03453 MoeA N-terminal region (domain I and II) AC731_009955 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AC731_009960 PF01895 PhoU domain AC731_009965 PF04362 Bacterial Fe(2+) trafficking AC731_009970 PF00563 EAL domain AC731_009970 PF00990 Diguanylate cyclase, GGDEF domain AC731_009970 PF03707 Bacterial signalling protein N terminal repeat AC731_009975 PF00583 Acetyltransferase (GNAT) family AC731_009975 PF00696 Amino acid kinase family AC731_009980 PF03976 Polyphosphate kinase 2 (PPK2) AC731_009985 PF04452 RNA methyltransferase AC731_009990 PF00459 Inositol monophosphatase family AC731_009995 PF00485 Phosphoribulokinase / Uridine kinase family AC731_010000 PF02780 Transketolase, C-terminal domain AC731_010000 PF02779 Transketolase, pyrimidine binding domain AC731_010000 PF00456 Transketolase, thiamine diphosphate binding domain AC731_010005 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AC731_010005 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AC731_010010 PF00162 Phosphoglycerate kinase AC731_010020 PF02887 Pyruvate kinase, alpha/beta domain AC731_010020 PF00224 Pyruvate kinase, barrel domain AC731_010030 PF01116 Fructose-bisphosphate aldolase class-II AC731_010045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_010045 PF03466 LysR substrate binding domain AC731_010050 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AC731_010050 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AC731_010055 PF00101 Ribulose bisphosphate carboxylase, small chain AC731_010060 PF17866 AAA lid domain AC731_010060 PF00004 ATPase family associated with various cellular activities (AAA) AC731_010065 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AC731_010070 PF00485 Phosphoribulokinase / Uridine kinase family AC731_010075 PF00456 Transketolase, thiamine diphosphate binding domain AC731_010075 PF02780 Transketolase, C-terminal domain AC731_010075 PF02779 Transketolase, pyrimidine binding domain AC731_010080 PF00162 Phosphoglycerate kinase AC731_010085 PF01116 Fructose-bisphosphate aldolase class-II AC731_010095 PF00775 Dioxygenase AC731_010095 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AC731_010105 PF03352 Methyladenine glycosylase AC731_010110 PF01259 SAICAR synthetase AC731_010120 PF01432 Peptidase family M3 AC731_010130 PF13545 Crp-like helix-turn-helix domain AC731_010130 PF00027 Cyclic nucleotide-binding domain AC731_010140 PF00398 Ribosomal RNA adenine dimethylase AC731_010145 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AC731_010150 PF09312 SurA N-terminal domain AC731_010150 PF00639 PPIC-type PPIASE domain AC731_010155 PF03968 OstA-like protein AC731_010155 PF04453 LPS transport system D AC731_010160 PF01636 Phosphotransferase enzyme family AC731_010165 PF00483 Nucleotidyl transferase AC731_010170 PF05195 Aminopeptidase P, N-terminal domain AC731_010170 PF00557 Metallopeptidase family M24 AC731_010175 PF01494 FAD binding domain AC731_010180 PF03180 NLPA lipoprotein AC731_010185 PF00528 Binding-protein-dependent transport system inner membrane component AC731_010190 PF00005 ABC transporter AC731_010190 PF09383 NIL domain AC731_010195 PF01207 Dihydrouridine synthase (Dus) AC731_010200 PF02954 Bacterial regulatory protein, Fis family AC731_010205 PF01808 AICARFT/IMPCHase bienzyme AC731_010205 PF02142 MGS-like domain AC731_010210 PF02843 Phosphoribosylglycinamide synthetase, C domain AC731_010210 PF02844 Phosphoribosylglycinamide synthetase, N domain AC731_010210 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AC731_010215 PF07411 Domain of unknown function (DUF1508) AC731_010220 PF01218 Coproporphyrinogen III oxidase AC731_010230 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AC731_010235 PF02602 Uroporphyrinogen-III synthase HemD AC731_010240 PF03900 Porphobilinogen deaminase, C-terminal domain AC731_010240 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AC731_010250 PF00311 Phosphoenolpyruvate carboxylase AC731_010255 PF04397 LytTr DNA-binding domain AC731_010255 PF00072 Response regulator receiver domain AC731_010260 PF06580 Histidine kinase AC731_010260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_010260 PF07694 5TMR of 5TMR-LYT AC731_010265 PF00206 Lyase AC731_010265 PF14698 Argininosuccinate lyase C-terminal AC731_010270 PF03793 PASTA domain AC731_010270 PF00069 Protein kinase domain AC731_010300 PF00462 Glutaredoxin AC731_010305 PF17827 PrmC N-terminal domain AC731_010305 PF05175 Methyltransferase small domain AC731_010310 PF03462 PCRF domain AC731_010310 PF00472 RF-1 domain AC731_010315 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AC731_010315 PF01488 Shikimate / quinate 5-dehydrogenase AC731_010315 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AC731_010335 PF02899 Phage integrase, N-terminal SAM-like domain AC731_010335 PF00589 Phage integrase family AC731_010355 PF00072 Response regulator receiver domain AC731_010355 PF00486 Transcriptional regulatory protein, C terminal AC731_010360 PF00512 His Kinase A (phospho-acceptor) domain AC731_010360 PF08521 Two-component sensor kinase N-terminal AC731_010360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_010365 PF00474 Sodium:solute symporter family AC731_010370 PF04341 Protein of unknown function, DUF485 AC731_010375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_010375 PF00512 His Kinase A (phospho-acceptor) domain AC731_010375 PF08521 Two-component sensor kinase N-terminal AC731_010380 PF00072 Response regulator receiver domain AC731_010380 PF00486 Transcriptional regulatory protein, C terminal AC731_010385 PF00118 TCP-1/cpn60 chaperonin family AC731_010390 PF00166 Chaperonin 10 Kd subunit AC731_010410 PF02080 TrkA-C domain AC731_010410 PF03600 Citrate transporter AC731_010415 PF16177 Acetyl-coenzyme A synthetase N-terminus AC731_010415 PF00501 AMP-binding enzyme AC731_010415 PF13193 AMP-binding enzyme C-terminal domain AC731_010420 PF01627 Hpt domain AC731_010420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_010420 PF00072 Response regulator receiver domain AC731_010420 PF01584 CheW-like domain AC731_010425 PF00107 Zinc-binding dehydrogenase AC731_010425 PF08240 Alcohol dehydrogenase GroES-like domain AC731_010435 PF04011 LemA family AC731_010465 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AC731_010465 PF01464 Transglycosylase SLT domain AC731_010470 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AC731_010470 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AC731_010470 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AC731_010480 PF00158 Sigma-54 interaction domain AC731_010480 PF00072 Response regulator receiver domain AC731_010480 PF02954 Bacterial regulatory protein, Fis family AC731_010485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_010485 PF02743 Cache domain AC731_010485 PF00512 His Kinase A (phospho-acceptor) domain AC731_010490 PF02397 Bacterial sugar transferase AC731_010495 PF01575 MaoC like domain AC731_010530 PF00303 Thymidylate synthase AC731_010535 PF00186 Dihydrofolate reductase AC731_010540 PF01276 Orn/Lys/Arg decarboxylase, major domain AC731_010540 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AC731_010540 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AC731_010545 PF00692 dUTPase AC731_010550 PF10609 NUBPL iron-transfer P-loop NTPase AC731_010555 PF00691 OmpA family AC731_010555 PF04972 BON domain AC731_010560 PF09334 tRNA synthetases class I (M) AC731_010560 PF01588 Putative tRNA binding domain AC731_010565 PF00916 Sulfate permease family AC731_010565 PF01740 STAS domain AC731_010570 PF00708 Acylphosphatase AC731_010575 PF00924 Mechanosensitive ion channel AC731_010580 PF02811 PHP domain AC731_010580 PF14579 Helix-hairpin-helix motif AC731_010580 PF01336 OB-fold nucleic acid binding domain AC731_010580 PF07733 Bacterial DNA polymerase III alpha NTPase domain AC731_010580 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AC731_010585 PF00107 Zinc-binding dehydrogenase AC731_010585 PF08240 Alcohol dehydrogenase GroES-like domain AC731_010590 PF02253 Phospholipase A1 AC731_010595 PF03949 Malic enzyme, NAD binding domain AC731_010595 PF00390 Malic enzyme, N-terminal domain AC731_010595 PF01515 Phosphate acetyl/butaryl transferase AC731_010600 PF13614 AAA domain AC731_010605 PF00580 UvrD/REP helicase N-terminal domain AC731_010605 PF13361 UvrD-like helicase C-terminal domain AC731_010615 PF00133 tRNA synthetases class I (I, L, M and V) AC731_010615 PF09334 tRNA synthetases class I (M) AC731_010615 PF13603 Leucyl-tRNA synthetase, Domain 2 AC731_010615 PF08264 Anticodon-binding domain of tRNA AC731_010625 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AC731_010625 PF06144 DNA polymerase III, delta subunit AC731_010630 PF00171 Aldehyde dehydrogenase family AC731_010645 PF02899 Phage integrase, N-terminal SAM-like domain AC731_010645 PF00589 Phage integrase family AC731_010650 PF04073 Aminoacyl-tRNA editing domain AC731_010665 PF02660 Glycerol-3-phosphate acyltransferase AC731_010670 PF00814 Glycoprotease family AC731_010690 PF01165 Ribosomal protein S21 AC731_010695 PF08275 DNA primase catalytic core, N-terminal domain AC731_010695 PF08278 DNA primase DnaG DnaB-binding AC731_010695 PF01807 CHC2 zinc finger AC731_010695 PF10410 DnaB-helicase binding domain of primase AC731_010700 PF04539 Sigma-70 region 3 AC731_010700 PF04545 Sigma-70, region 4 AC731_010700 PF03979 Sigma-70 factor, region 1.1 AC731_010700 PF04542 Sigma-70 region 2 AC731_010700 PF04546 Sigma-70, non-essential region AC731_010700 PF00140 Sigma-70 factor, region 1.2 AC731_010745 PF13629 Pilus formation protein N terminal region AC731_010745 PF04972 BON domain AC731_010745 PF00263 Bacterial type II and III secretion system protein AC731_010750 PF00437 Type II/IV secretion system protein AC731_010780 PF14220 Domain of unknown function (DUF4329) AC731_010780 PF05593 RHS Repeat AC731_010780 PF03527 RHS protein AC731_010810 PF00107 Zinc-binding dehydrogenase AC731_010810 PF08240 Alcohol dehydrogenase GroES-like domain AC731_010815 PF03060 Nitronate monooxygenase AC731_010820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AC731_010840 PF02881 SRP54-type protein, helical bundle domain AC731_010840 PF02978 Signal peptide binding domain AC731_010840 PF00448 SRP54-type protein, GTPase domain AC731_010850 PF00437 Type II/IV secretion system protein AC731_010850 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AC731_010855 PF00482 Type II secretion system (T2SS), protein F AC731_010860 PF06750 Bacterial Peptidase A24 N-terminal domain AC731_010860 PF01478 Type IV leader peptidase family AC731_010875 PF02938 GAD domain AC731_010875 PF00152 tRNA synthetases class II (D, K and N) AC731_010875 PF01336 OB-fold nucleic acid binding domain AC731_010885 PF00545 ribonuclease AC731_010895 PF00011 Hsp20/alpha crystallin family AC731_010900 PF00696 Amino acid kinase family AC731_010905 PF01370 NAD dependent epimerase/dehydratase family AC731_010910 PF00534 Glycosyl transferases group 1 AC731_010910 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AC731_010915 PF02321 Outer membrane efflux protein AC731_010920 PF00899 ThiF family AC731_010920 PF00581 Rhodanese-like domain AC731_010930 PF00194 Eukaryotic-type carbonic anhydrase AC731_010935 PF08543 Phosphomethylpyrimidine kinase AC731_010940 PF01964 Radical SAM ThiC family AC731_010940 PF13667 ThiC-associated domain AC731_010945 PF00107 Zinc-binding dehydrogenase AC731_010945 PF08240 Alcohol dehydrogenase GroES-like domain AC731_010950 PF05736 OprF membrane domain AC731_010950 PF00691 OmpA family AC731_010955 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AC731_010960 PF00924 Mechanosensitive ion channel AC731_010965 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AC731_010965 PF00749 tRNA synthetases class I (E and Q), catalytic domain AC731_010975 PF14338 Mrr N-terminal domain AC731_010975 PF04471 Restriction endonuclease AC731_010980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC731_010980 PF00529 HlyD membrane-fusion protein of T1SS AC731_010985 PF00005 ABC transporter AC731_010985 PF02687 FtsX-like permease family AC731_010985 PF12704 MacB-like periplasmic core domain AC731_010990 PF00005 ABC transporter AC731_010990 PF02687 FtsX-like permease family AC731_010990 PF12704 MacB-like periplasmic core domain AC731_010995 PF12704 MacB-like periplasmic core domain AC731_010995 PF02687 FtsX-like permease family AC731_010995 PF00005 ABC transporter AC731_011005 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AC731_011005 PF00361 Proton-conducting membrane transporter AC731_011005 PF13244 Domain of unknown function (DUF4040) AC731_011005 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AC731_011025 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AC731_011030 PF03334 Na+/H+ antiporter subunit AC731_011035 PF00849 RNA pseudouridylate synthase AC731_011035 PF01479 S4 domain AC731_011045 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AC731_011050 PF01899 Na+/H+ ion antiporter subunit AC731_011055 PF00361 Proton-conducting membrane transporter AC731_011060 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AC731_011065 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AC731_011065 PF00361 Proton-conducting membrane transporter AC731_011065 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AC731_011065 PF13244 Domain of unknown function (DUF4040) AC731_011070 PF09339 IclR helix-turn-helix domain AC731_011070 PF01614 Bacterial transcriptional regulator AC731_011075 PF00768 D-alanyl-D-alanine carboxypeptidase AC731_011085 PF01515 Phosphate acetyl/butaryl transferase AC731_011085 PF03949 Malic enzyme, NAD binding domain AC731_011085 PF00390 Malic enzyme, N-terminal domain AC731_011090 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AC731_011090 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AC731_011095 PF00155 Aminotransferase class I and II AC731_011100 PF01464 Transglycosylase SLT domain AC731_011100 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AC731_011105 PF01510 N-acetylmuramoyl-L-alanine amidase AC731_011110 PF00009 Elongation factor Tu GTP binding domain AC731_011115 PF01507 Phosphoadenosine phosphosulfate reductase family AC731_011120 PF00459 Inositol monophosphatase family AC731_011125 PF03600 Citrate transporter AC731_011125 PF02080 TrkA-C domain AC731_011130 PF13193 AMP-binding enzyme C-terminal domain AC731_011130 PF00501 AMP-binding enzyme AC731_011145 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AC731_011145 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AC731_011170 PF03062 MBOAT, membrane-bound O-acyltransferase family AC731_011180 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AC731_011180 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AC731_011180 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AC731_011185 PF02875 Mur ligase family, glutamate ligase domain AC731_011185 PF08245 Mur ligase middle domain AC731_011185 PF01225 Mur ligase family, catalytic domain AC731_011225 PF00535 Glycosyl transferase family 2 AC731_011230 PF00535 Glycosyl transferase family 2 AC731_011255 PF00534 Glycosyl transferases group 1 AC731_011255 PF13439 Glycosyltransferase Family 4 AC731_011260 PF13439 Glycosyltransferase Family 4 AC731_011275 PF00733 Asparagine synthase AC731_011275 PF13537 Glutamine amidotransferase domain AC731_011280 PF00534 Glycosyl transferases group 1 AC731_011300 PF01522 Polysaccharide deacetylase AC731_011305 PF02350 UDP-N-acetylglucosamine 2-epimerase AC731_011310 PF13401 AAA domain AC731_011310 PF01471 Putative peptidoglycan binding domain AC731_011320 PF13614 AAA domain AC731_011335 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AC731_011335 PF00753 Metallo-beta-lactamase superfamily AC731_011335 PF10996 Beta-Casp domain AC731_011340 PF00158 Sigma-54 interaction domain AC731_011340 PF00072 Response regulator receiver domain AC731_011340 PF02954 Bacterial regulatory protein, Fis family AC731_011345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_011345 PF00512 His Kinase A (phospho-acceptor) domain AC731_011355 PF00155 Aminotransferase class I and II AC731_011360 PF01008 Initiation factor 2 subunit family AC731_011365 PF00596 Class II Aldolase and Adducin N-terminal domain AC731_011365 PF01008 Initiation factor 2 subunit family AC731_011370 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AC731_011370 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AC731_011375 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AC731_011375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AC731_011380 PF02885 Glycosyl transferase family, helical bundle domain AC731_011385 PF07238 PilZ domain AC731_011390 PF05726 Pirin C-terminal cupin domain AC731_011390 PF02678 Pirin AC731_011395 PF02525 Flavodoxin-like fold AC731_011400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_011400 PF03466 LysR substrate binding domain AC731_011405 PF02600 Disulfide bond formation protein DsbB AC731_011420 PF00873 AcrB/AcrD/AcrF family AC731_011425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC731_011435 PF00899 ThiF family AC731_011440 PF00753 Metallo-beta-lactamase superfamily AC731_011445 PF00436 Single-strand binding protein family AC731_011450 PF07690 Major Facilitator Superfamily AC731_011455 PF17755 UvrA DNA-binding domain AC731_011455 PF17760 UvrA interaction domain AC731_011460 PF16363 GDP-mannose 4,6 dehydratase AC731_011465 PF01196 Ribosomal protein L17 AC731_011470 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AC731_011470 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AC731_011470 PF01000 RNA polymerase Rpb3/RpoA insert domain AC731_011475 PF01479 S4 domain AC731_011475 PF00163 Ribosomal protein S4/S9 N-terminal domain AC731_011480 PF00411 Ribosomal protein S11 AC731_011485 PF00416 Ribosomal protein S13/S18 AC731_011490 PF01176 Translation initiation factor 1A / IF-1 AC731_011495 PF00344 SecY translocase AC731_011500 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AC731_011505 PF00327 Ribosomal protein L30p/L7e AC731_011510 PF03719 Ribosomal protein S5, C-terminal domain AC731_011510 PF00333 Ribosomal protein S5, N-terminal domain AC731_011515 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AC731_011520 PF00347 Ribosomal protein L6 AC731_011525 PF00410 Ribosomal protein S8 AC731_011530 PF00253 Ribosomal protein S14p/S29e AC731_011535 PF00281 Ribosomal protein L5 AC731_011535 PF00673 ribosomal L5P family C-terminus AC731_011540 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AC731_011545 PF00238 Ribosomal protein L14p/L23e AC731_011550 PF00366 Ribosomal protein S17 AC731_011555 PF00831 Ribosomal L29 protein AC731_011560 PF00252 Ribosomal protein L16p/L10e AC731_011565 PF07650 KH domain AC731_011565 PF00189 Ribosomal protein S3, C-terminal domain AC731_011570 PF00237 Ribosomal protein L22p/L17e AC731_011575 PF00203 Ribosomal protein S19 AC731_011580 PF00181 Ribosomal Proteins L2, RNA binding domain AC731_011580 PF03947 Ribosomal Proteins L2, C-terminal domain AC731_011585 PF00276 Ribosomal protein L23 AC731_011590 PF00573 Ribosomal protein L4/L1 family AC731_011595 PF00297 Ribosomal protein L3 AC731_011600 PF00338 Ribosomal protein S10p/S20e AC731_011605 PF00009 Elongation factor Tu GTP binding domain AC731_011605 PF03143 Elongation factor Tu C-terminal domain AC731_011605 PF03144 Elongation factor Tu domain 2 AC731_011610 PF14492 Elongation Factor G, domain II AC731_011610 PF00679 Elongation factor G C-terminus AC731_011610 PF03764 Elongation factor G, domain IV AC731_011610 PF03144 Elongation factor Tu domain 2 AC731_011610 PF00009 Elongation factor Tu GTP binding domain AC731_011615 PF00177 Ribosomal protein S7p/S5e AC731_011620 PF00164 Ribosomal protein S12/S23 AC731_011625 PF04983 RNA polymerase Rpb1, domain 3 AC731_011625 PF00623 RNA polymerase Rpb1, domain 2 AC731_011625 PF04997 RNA polymerase Rpb1, domain 1 AC731_011625 PF04998 RNA polymerase Rpb1, domain 5 AC731_011625 PF05000 RNA polymerase Rpb1, domain 4 AC731_011630 PF10385 RNA polymerase beta subunit external 1 domain AC731_011630 PF00562 RNA polymerase Rpb2, domain 6 AC731_011630 PF04563 RNA polymerase beta subunit AC731_011630 PF04565 RNA polymerase Rpb2, domain 3 AC731_011630 PF04561 RNA polymerase Rpb2, domain 2 AC731_011630 PF04560 RNA polymerase Rpb2, domain 7 AC731_011635 PF16320 Ribosomal protein L7/L12 dimerisation domain AC731_011635 PF00542 Ribosomal protein L7/L12 C-terminal domain AC731_011640 PF00466 Ribosomal protein L10 AC731_011645 PF00687 Ribosomal protein L1p/L10e family AC731_011650 PF03946 Ribosomal protein L11, N-terminal domain AC731_011650 PF00298 Ribosomal protein L11, RNA binding domain AC731_011655 PF00467 KOW motif AC731_011655 PF02357 Transcription termination factor nusG AC731_011660 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AC731_011670 PF03143 Elongation factor Tu C-terminal domain AC731_011670 PF00009 Elongation factor Tu GTP binding domain AC731_011670 PF03144 Elongation factor Tu domain 2 AC731_011705 PF00196 Bacterial regulatory proteins, luxR family AC731_011705 PF00072 Response regulator receiver domain AC731_011715 PF00072 Response regulator receiver domain AC731_011715 PF01627 Hpt domain AC731_011715 PF00672 HAMP domain AC731_011715 PF00512 His Kinase A (phospho-acceptor) domain AC731_011715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_011725 PF02515 CoA-transferase family III AC731_011735 PF00005 ABC transporter AC731_011750 PF02653 Branched-chain amino acid transport system / permease component AC731_011755 PF12399 Branched-chain amino acid ATP-binding cassette transporter AC731_011755 PF00005 ABC transporter AC731_011760 PF00501 AMP-binding enzyme AC731_011770 PF13677 Membrane MotB of proton-channel complex MotA/MotB AC731_011770 PF00691 OmpA family AC731_011780 PF08447 PAS fold AC731_011780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_011785 PF02310 B12 binding domain AC731_011785 PF01642 Methylmalonyl-CoA mutase AC731_011795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_011795 PF08448 PAS fold AC731_011795 PF13188 PAS domain AC731_011795 PF00512 His Kinase A (phospho-acceptor) domain AC731_011795 PF00072 Response regulator receiver domain AC731_011800 PF00486 Transcriptional regulatory protein, C terminal AC731_011800 PF00072 Response regulator receiver domain AC731_011810 PF04228 Putative neutral zinc metallopeptidase AC731_011815 PF04055 Radical SAM superfamily AC731_011820 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AC731_011820 PF00361 Proton-conducting membrane transporter AC731_011820 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AC731_011820 PF13244 Domain of unknown function (DUF4040) AC731_011825 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AC731_011830 PF00361 Proton-conducting membrane transporter AC731_011835 PF01899 Na+/H+ ion antiporter subunit AC731_011840 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AC731_011850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC731_011850 PF00289 Biotin carboxylase, N-terminal domain AC731_011850 PF02785 Biotin carboxylase C-terminal domain AC731_011855 PF01039 Carboxyl transferase domain AC731_011865 PF01642 Methylmalonyl-CoA mutase AC731_011865 PF02310 B12 binding domain AC731_011870 PF07729 FCD domain AC731_011870 PF00392 Bacterial regulatory proteins, gntR family AC731_011875 PF00571 CBS domain AC731_011875 PF03471 Transporter associated domain AC731_011875 PF01595 Cyclin M transmembrane N-terminal domain AC731_011880 PF00474 Sodium:solute symporter family AC731_011885 PF04341 Protein of unknown function, DUF485 AC731_011890 PF00378 Enoyl-CoA hydratase/isomerase AC731_011895 PF02321 Outer membrane efflux protein AC731_011905 PF12792 CSS motif domain associated with EAL AC731_011905 PF00563 EAL domain AC731_011910 PF00664 ABC transporter transmembrane region AC731_011910 PF03412 Peptidase C39 family AC731_011910 PF00005 ABC transporter AC731_011920 PF00072 Response regulator receiver domain AC731_011920 PF00196 Bacterial regulatory proteins, luxR family AC731_011955 PF00005 ABC transporter AC731_011965 PF01475 Ferric uptake regulator family AC731_011975 PF00005 ABC transporter AC731_011980 PF00950 ABC 3 transport family AC731_011985 PF01297 Zinc-uptake complex component A periplasmic AC731_012000 PF05164 Cell division protein ZapA AC731_012010 PF00920 Dehydratase family AC731_012015 PF04337 Protein of unknown function, DUF480 AC731_012020 PF01790 Prolipoprotein diacylglyceryl transferase AC731_012030 PF08447 PAS fold AC731_012030 PF00563 EAL domain AC731_012030 PF00990 Diguanylate cyclase, GGDEF domain AC731_012030 PF08448 PAS fold AC731_012045 PF04324 BFD-like [2Fe-2S] binding domain AC731_012050 PF00210 Ferritin-like domain AC731_012060 PF01618 MotA/TolQ/ExbB proton channel family AC731_012065 PF02472 Biopolymer transport protein ExbD/TolR AC731_012070 PF01475 Ferric uptake regulator family AC731_012075 PF00034 Cytochrome c AC731_012075 PF03150 Di-haem cytochrome c peroxidase AC731_012080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC731_012085 PF12704 MacB-like periplasmic core domain AC731_012085 PF02687 FtsX-like permease family AC731_012085 PF00005 ABC transporter AC731_012090 PF02321 Outer membrane efflux protein AC731_012095 PF00593 TonB dependent receptor AC731_012095 PF07715 TonB-dependent Receptor Plug Domain AC731_012105 PF01070 FMN-dependent dehydrogenase AC731_012110 PF18331 PKHD-type hydroxylase C-terminal domain AC731_012110 PF13640 2OG-Fe(II) oxygenase superfamily AC731_012120 PF00005 ABC transporter AC731_012135 PF00593 TonB dependent receptor AC731_012135 PF07715 TonB-dependent Receptor Plug Domain AC731_012145 PF01479 S4 domain AC731_012145 PF00163 Ribosomal protein S4/S9 N-terminal domain AC731_012155 PF02421 Ferrous iron transport protein B AC731_012155 PF07670 Nucleoside recognition AC731_012155 PF17910 FeoB cytosolic helical domain AC731_012155 PF07664 Ferrous iron transport protein B C terminus AC731_012165 PF00486 Transcriptional regulatory protein, C terminal AC731_012165 PF00072 Response regulator receiver domain AC731_012170 PF13426 PAS domain AC731_012170 PF00072 Response regulator receiver domain AC731_012170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_012175 PF13193 AMP-binding enzyme C-terminal domain AC731_012175 PF00501 AMP-binding enzyme AC731_012195 PF01169 Uncharacterized protein family UPF0016 AC731_012200 PF00873 AcrB/AcrD/AcrF family AC731_012215 PF14572 Phosphoribosyl synthetase-associated domain AC731_012215 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AC731_012220 PF00591 Glycosyl transferase family, a/b domain AC731_012220 PF02885 Glycosyl transferase family, helical bundle domain AC731_012220 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AC731_012225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_012245 PF06472 ABC transporter transmembrane region 2 AC731_012245 PF00005 ABC transporter AC731_012255 PF03707 Bacterial signalling protein N terminal repeat AC731_012255 PF00990 Diguanylate cyclase, GGDEF domain AC731_012255 PF00563 EAL domain AC731_012260 PF00664 ABC transporter transmembrane region AC731_012260 PF00005 ABC transporter AC731_012265 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC731_012265 PF13192 Thioredoxin domain AC731_012270 PF00578 AhpC/TSA family AC731_012270 PF10417 C-terminal domain of 1-Cys peroxiredoxin AC731_012275 PF18075 FtsX extracellular domain AC731_012280 PF00005 ABC transporter AC731_012285 PF02881 SRP54-type protein, helical bundle domain AC731_012285 PF00448 SRP54-type protein, GTPase domain AC731_012290 PF00675 Insulinase (Peptidase family M16) AC731_012290 PF05193 Peptidase M16 inactive domain AC731_012295 PF05193 Peptidase M16 inactive domain AC731_012305 PF01467 Cytidylyltransferase-like AC731_012310 PF00037 4Fe-4S binding domain AC731_012315 PF00350 Dynamin family AC731_012320 PF06827 Zinc finger found in FPG and IleRS AC731_012320 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AC731_012320 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AC731_012330 PF03550 Outer membrane lipoprotein LolB AC731_012335 PF08544 GHMP kinases C terminal AC731_012335 PF00288 GHMP kinases N terminal domain AC731_012345 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AC731_012345 PF14572 Phosphoribosyl synthetase-associated domain AC731_012350 PF01386 Ribosomal L25p family AC731_012350 PF14693 Ribosomal protein TL5, C-terminal domain AC731_012355 PF01195 Peptidyl-tRNA hydrolase AC731_012365 PF06071 Protein of unknown function (DUF933) AC731_012365 PF01926 50S ribosome-binding GTPase AC731_012370 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AC731_012385 PF00072 Response regulator receiver domain AC731_012390 PF00512 His Kinase A (phospho-acceptor) domain AC731_012390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_012395 PF18793 Nitrous oxide reductase propeller repeat 2 AC731_012395 PF18764 Nitrous oxide reductase propeller repeat AC731_012395 PF13473 Cupredoxin-like domain AC731_012400 PF12801 4Fe-4S binding domain AC731_012400 PF04205 FMN-binding domain AC731_012410 PF05048 Periplasmic copper-binding protein (NosD) AC731_012415 PF00005 ABC transporter AC731_012420 PF12679 ABC-2 family transporter protein AC731_012445 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AC731_012450 PF00749 tRNA synthetases class I (E and Q), catalytic domain AC731_012455 PF13380 CoA binding domain AC731_012460 PF13091 PLD-like domain AC731_012465 PF03372 Endonuclease/Exonuclease/phosphatase family AC731_012470 PF02445 Quinolinate synthetase A protein AC731_012480 PF01545 Cation efflux family AC731_012480 PF16916 Dimerisation domain of Zinc Transporter AC731_012495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_012495 PF00512 His Kinase A (phospho-acceptor) domain AC731_012495 PF00989 PAS fold AC731_012500 PF00072 Response regulator receiver domain AC731_012500 PF02954 Bacterial regulatory protein, Fis family AC731_012500 PF00158 Sigma-54 interaction domain AC731_012505 PF08279 HTH domain AC731_012505 PF03099 Biotin/lipoate A/B protein ligase family AC731_012505 PF02237 Biotin protein ligase C terminal domain AC731_012510 PF03309 Type III pantothenate kinase AC731_012515 PF00291 Pyridoxal-phosphate dependent enzyme AC731_012525 PF01121 Dephospho-CoA kinase AC731_012530 PF07072 Cell division protein AC731_012535 PF03884 DNA gyrase inhibitor YacG AC731_012540 PF02110 Hydroxyethylthiazole kinase family AC731_012540 PF02581 Thiamine monophosphate synthase AC731_012555 PF06725 3D domain AC731_012555 PF03562 MltA specific insert domain AC731_012560 PF13098 Thioredoxin-like domain AC731_012560 PF10411 Disulfide bond isomerase protein N-terminus AC731_012565 PF01494 FAD binding domain AC731_012595 PF03796 DnaB-like helicase C terminal domain AC731_012595 PF00772 DnaB-like helicase N terminal domain AC731_012600 PF03948 Ribosomal protein L9, C-terminal domain AC731_012600 PF01281 Ribosomal protein L9, N-terminal domain AC731_012605 PF01084 Ribosomal protein S18 AC731_012615 PF01250 Ribosomal protein S6 AC731_012625 PF11898 Domain of unknown function (DUF3418) AC731_012625 PF04408 Helicase associated domain (HA2) AC731_012625 PF00271 Helicase conserved C-terminal domain AC731_012625 PF00270 DEAD/DEAH box helicase AC731_012625 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AC731_012635 PF03692 Putative zinc- or iron-chelating domain AC731_012640 PF02673 Bacitracin resistance protein BacA AC731_012645 PF05728 Uncharacterised protein family (UPF0227) AC731_012650 PF01209 ubiE/COQ5 methyltransferase family AC731_012655 PF00892 EamA-like transporter family AC731_012660 PF00773 RNB domain AC731_012670 PF08501 Shikimate dehydrogenase substrate binding domain AC731_012670 PF01488 Shikimate / quinate 5-dehydrogenase AC731_012670 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AC731_012675 PF00912 Transglycosylase AC731_012680 PF00571 CBS domain AC731_012680 PF01769 Divalent cation transporter AC731_012680 PF03448 MgtE intracellular N domain AC731_012685 PF00202 Aminotransferase class-III AC731_012690 PF02581 Thiamine monophosphate synthase AC731_012695 PF08543 Phosphomethylpyrimidine kinase AC731_012700 PF00301 Rubredoxin AC731_012705 PF00072 Response regulator receiver domain AC731_012710 PF00072 Response regulator receiver domain AC731_012715 PF01584 CheW-like domain AC731_012720 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AC731_012720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_012725 PF01627 Hpt domain AC731_012725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_012725 PF01584 CheW-like domain AC731_012725 PF00072 Response regulator receiver domain AC731_012730 PF00155 Aminotransferase class I and II AC731_012735 PF00875 DNA photolyase AC731_012735 PF03441 FAD binding domain of DNA photolyase AC731_012740 PF02622 Uncharacterized ACR, COG1678 AC731_012745 PF03652 Holliday junction resolvase AC731_012750 PF00156 Phosphoribosyl transferase domain AC731_012755 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AC731_012755 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AC731_012760 PF01979 Amidohydrolase family AC731_012765 PF02325 YGGT family AC731_012770 PF03807 NADP oxidoreductase coenzyme F420-dependent AC731_012770 PF14748 Pyrroline-5-carboxylate reductase dimerisation AC731_012775 PF01168 Alanine racemase, N-terminal domain AC731_012780 PF00437 Type II/IV secretion system protein AC731_012785 PF00437 Type II/IV secretion system protein AC731_012790 PF01170 Putative RNA methylase family UPF0020 AC731_012790 PF02926 THUMP domain AC731_012805 PF13247 4Fe-4S dicluster domain AC731_012810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AC731_012810 PF01568 Molydopterin dinucleotide binding domain AC731_012810 PF00384 Molybdopterin oxidoreductase AC731_012840 PF02634 FdhD/NarQ family AC731_012845 PF12804 MobA-like NTP transferase domain AC731_012860 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AC731_012865 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC731_012865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AC731_012880 PF07963 Prokaryotic N-terminal methylation motif AC731_012880 PF00114 Pilin (bacterial filament) AC731_012905 PF00005 ABC transporter AC731_012910 PF05685 Putative restriction endonuclease AC731_012915 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AC731_012920 PF00512 His Kinase A (phospho-acceptor) domain AC731_012920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_012920 PF00989 PAS fold AC731_012925 PF00072 Response regulator receiver domain AC731_012925 PF00158 Sigma-54 interaction domain AC731_012925 PF02954 Bacterial regulatory protein, Fis family AC731_012940 PF00175 Oxidoreductase NAD-binding domain AC731_012940 PF00970 Oxidoreductase FAD-binding domain AC731_012940 PF00111 2Fe-2S iron-sulfur cluster binding domain AC731_012945 PF08668 HDOD domain AC731_012945 PF00563 EAL domain AC731_012950 PF13426 PAS domain AC731_012950 PF13188 PAS domain AC731_012950 PF00512 His Kinase A (phospho-acceptor) domain AC731_012950 PF00989 PAS fold AC731_012950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_012955 PF00563 EAL domain AC731_012955 PF00990 Diguanylate cyclase, GGDEF domain AC731_012955 PF03707 Bacterial signalling protein N terminal repeat AC731_012960 PF00034 Cytochrome c AC731_012965 PF14489 QueF-like protein AC731_012965 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AC731_012970 PF07685 CobB/CobQ-like glutamine amidotransferase domain AC731_012970 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AC731_012975 PF03186 CobD/Cbib protein AC731_012980 PF00155 Aminotransferase class I and II AC731_012985 PF01497 Periplasmic binding protein AC731_013000 PF00270 DEAD/DEAH box helicase AC731_013000 PF00271 Helicase conserved C-terminal domain AC731_013005 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AC731_013005 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AC731_013010 PF00005 ABC transporter AC731_013010 PF00571 CBS domain AC731_013020 PF02666 Phosphatidylserine decarboxylase AC731_013025 PF01810 LysE type translocator AC731_013030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_013030 PF03466 LysR substrate binding domain AC731_013035 PF07685 CobB/CobQ-like glutamine amidotransferase domain AC731_013035 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AC731_013040 PF10414 Sirohaem synthase dimerisation region AC731_013040 PF14824 Sirohaem biosynthesis protein central AC731_013040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AC731_013045 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AC731_013045 PF12557 Cob(I)alamin adenosyltransferase N terminal AC731_013055 PF00005 ABC transporter AC731_013060 PF01032 FecCD transport family AC731_013065 PF07715 TonB-dependent Receptor Plug Domain AC731_013065 PF00593 TonB dependent receptor AC731_013070 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AC731_013075 PF02277 Phosphoribosyltransferase AC731_013080 PF02654 Cobalamin-5-phosphate synthase AC731_013085 PF00300 Histidine phosphatase superfamily (branch 1) AC731_013090 PF00294 pfkB family carbohydrate kinase AC731_013090 PF01467 Cytidylyltransferase-like AC731_013095 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AC731_013095 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AC731_013095 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AC731_013105 PF00534 Glycosyl transferases group 1 AC731_013105 PF13439 Glycosyltransferase Family 4 AC731_013110 PF00534 Glycosyl transferases group 1 AC731_013115 PF00534 Glycosyl transferases group 1 AC731_013120 PF17102 Stealth protein CR3, conserved region 3 AC731_013120 PF17101 Stealth protein CR1, conserved region 1 AC731_013120 PF11380 Stealth protein CR2, conserved region 2 AC731_013120 PF17103 Stealth protein CR4, conserved region 4 AC731_013120 PF00534 Glycosyl transferases group 1 AC731_013130 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AC731_013140 PF00534 Glycosyl transferases group 1 AC731_013140 PF13439 Glycosyltransferase Family 4 AC731_013145 PF01522 Polysaccharide deacetylase AC731_013150 PF00664 ABC transporter transmembrane region AC731_013150 PF00005 ABC transporter AC731_013160 PF01061 ABC-2 type transporter AC731_013165 PF08239 Bacterial SH3 domain AC731_013165 PF00005 ABC transporter AC731_013180 PF08485 Polysaccharide biosynthesis protein C-terminal AC731_013180 PF02719 Polysaccharide biosynthesis protein AC731_013185 PF02350 UDP-N-acetylglucosamine 2-epimerase AC731_013190 PF01370 NAD dependent epimerase/dehydratase family AC731_013195 PF02397 Bacterial sugar transferase AC731_013200 PF02719 Polysaccharide biosynthesis protein AC731_013220 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AC731_013225 PF00483 Nucleotidyl transferase AC731_013230 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AC731_013235 PF00294 pfkB family carbohydrate kinase AC731_013235 PF01467 Cytidylyltransferase-like AC731_013240 PF01367 5'-3' exonuclease, C-terminal SAM fold AC731_013240 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AC731_013240 PF00476 DNA polymerase family A AC731_013240 PF01612 3'-5' exonuclease AC731_013245 PF03641 Possible lysine decarboxylase AC731_013260 PF01636 Phosphotransferase enzyme family AC731_013275 PF01467 Cytidylyltransferase-like AC731_013285 PF02590 Predicted SPOUT methyltransferase AC731_013290 PF02545 Maf-like protein AC731_013295 PF00575 S1 RNA binding domain AC731_013295 PF10150 Ribonuclease E/G family AC731_013315 PF01654 Cytochrome bd terminal oxidase subunit I AC731_013320 PF02322 Cytochrome bd terminal oxidase subunit II AC731_013335 PF00005 ABC transporter AC731_013340 PF00005 ABC transporter AC731_013340 PF12399 Branched-chain amino acid ATP-binding cassette transporter AC731_013345 PF02653 Branched-chain amino acid transport system / permease component AC731_013345 PF11862 Domain of unknown function (DUF3382) AC731_013350 PF02653 Branched-chain amino acid transport system / permease component AC731_013360 PF01330 RuvA N terminal domain AC731_013360 PF07499 RuvA, C-terminal domain AC731_013365 PF17864 RuvB AAA lid domain AC731_013365 PF05491 RuvB C-terminal winged helix domain AC731_013365 PF05496 Holliday junction DNA helicase RuvB P-loop domain AC731_013380 PF02899 Phage integrase, N-terminal SAM-like domain AC731_013380 PF00589 Phage integrase family AC731_013390 PF01678 Diaminopimelate epimerase AC731_013395 PF03279 Bacterial lipid A biosynthesis acyltransferase AC731_013405 PF02773 S-adenosylmethionine synthetase, C-terminal domain AC731_013405 PF02772 S-adenosylmethionine synthetase, central domain AC731_013405 PF00438 S-adenosylmethionine synthetase, N-terminal domain AC731_013410 PF01699 Sodium/calcium exchanger protein AC731_013415 PF08447 PAS fold AC731_013415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_013415 PF13426 PAS domain AC731_013420 PF05221 S-adenosyl-L-homocysteine hydrolase AC731_013420 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AC731_013425 PF01479 S4 domain AC731_013425 PF01728 FtsJ-like methyltransferase AC731_013430 PF02219 Methylenetetrahydrofolate reductase AC731_013435 PF00072 Response regulator receiver domain AC731_013435 PF00990 Diguanylate cyclase, GGDEF domain AC731_013440 PF05872 Bacterial protein of unknown function (DUF853) AC731_013450 PF01709 Transcriptional regulator AC731_013460 PF01906 Putative heavy-metal-binding AC731_013465 PF02075 Crossover junction endodeoxyribonuclease RuvC AC731_013495 PF07298 NnrU protein AC731_013510 PF14403 Circularly permuted ATP-grasp type 2 AC731_013520 PF04168 A predicted alpha-helical domain with a conserved ER motif. AC731_013520 PF14403 Circularly permuted ATP-grasp type 2 AC731_013540 PF12697 Alpha/beta hydrolase family AC731_013545 PF00043 Glutathione S-transferase, C-terminal domain AC731_013545 PF13417 Glutathione S-transferase, N-terminal domain AC731_013550 PF03091 CutA1 divalent ion tolerance protein AC731_013555 PF11412 Disulphide bond corrector protein DsbC AC731_013555 PF02683 Cytochrome C biogenesis protein transmembrane region AC731_013560 PF00677 Lumazine binding domain AC731_013565 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AC731_013565 PF00925 GTP cyclohydrolase II AC731_013570 PF00885 6,7-dimethyl-8-ribityllumazine synthase AC731_013575 PF01029 NusB family AC731_013590 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AC731_013600 PF17788 HypF Kae1-like domain AC731_013600 PF07503 HypF finger AC731_013600 PF00708 Acylphosphatase AC731_013600 PF01300 Telomere recombination AC731_013605 PF01455 HupF/HypC family AC731_013610 PF01924 Hydrogenase formation hypA family AC731_013615 PF02769 AIR synthase related protein, C-terminal domain AC731_013615 PF00586 AIR synthase related protein, N-terminal domain AC731_013625 PF00497 Bacterial extracellular solute-binding proteins, family 3 AC731_013630 PF00528 Binding-protein-dependent transport system inner membrane component AC731_013635 PF00005 ABC transporter AC731_013640 PF03466 LysR substrate binding domain AC731_013640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_013645 PF00857 Isochorismatase family AC731_013650 PF00270 DEAD/DEAH box helicase AC731_013650 PF00271 Helicase conserved C-terminal domain AC731_013655 PF00216 Bacterial DNA-binding protein AC731_013665 PF01613 Flavin reductase like domain AC731_013670 PF14815 NUDIX domain AC731_013670 PF00730 HhH-GPD superfamily base excision DNA repair protein AC731_013670 PF00633 Helix-hairpin-helix motif AC731_013670 PF10576 Iron-sulfur binding domain of endonuclease III AC731_013680 PF02441 Flavoprotein AC731_013695 PF02653 Branched-chain amino acid transport system / permease component AC731_013710 PF00753 Metallo-beta-lactamase superfamily AC731_013715 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AC731_013715 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AC731_013725 PF01476 LysM domain AC731_013725 PF04972 BON domain AC731_013735 PF01593 Flavin containing amine oxidoreductase AC731_013745 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AC731_013745 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AC731_013750 PF03466 LysR substrate binding domain AC731_013750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_013760 PF01323 DSBA-like thioredoxin domain AC731_013770 PF00990 Diguanylate cyclase, GGDEF domain AC731_013770 PF03707 Bacterial signalling protein N terminal repeat AC731_013770 PF00563 EAL domain AC731_013785 PF13188 PAS domain AC731_013785 PF03707 Bacterial signalling protein N terminal repeat AC731_013785 PF00990 Diguanylate cyclase, GGDEF domain AC731_013785 PF00563 EAL domain AC731_013825 PF01965 DJ-1/PfpI family AC731_013830 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AC731_013845 PF13361 UvrD-like helicase C-terminal domain AC731_013845 PF00580 UvrD/REP helicase N-terminal domain AC731_013855 PF00578 AhpC/TSA family AC731_013865 PF00072 Response regulator receiver domain AC731_013865 PF01339 CheB methylesterase AC731_013870 PF03705 CheR methyltransferase, all-alpha domain AC731_013870 PF01739 CheR methyltransferase, SAM binding domain AC731_013890 PF00158 Sigma-54 interaction domain AC731_013890 PF02954 Bacterial regulatory protein, Fis family AC731_013890 PF01590 GAF domain AC731_013895 PF00106 short chain dehydrogenase AC731_013900 PF00743 Flavin-binding monooxygenase-like AC731_013905 PF08240 Alcohol dehydrogenase GroES-like domain AC731_013905 PF00107 Zinc-binding dehydrogenase AC731_013920 PF00313 'Cold-shock' DNA-binding domain AC731_013925 PF00873 AcrB/AcrD/AcrF family AC731_013935 PF04055 Radical SAM superfamily AC731_013935 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AC731_013940 PF03099 Biotin/lipoate A/B protein ligase family AC731_013945 PF04359 Protein of unknown function (DUF493) AC731_013950 PF01063 Amino-transferase class IV AC731_013955 PF07943 Penicillin-binding protein 5, C-terminal domain AC731_013955 PF00768 D-alanyl-D-alanine carboxypeptidase AC731_013960 PF05036 Sporulation related domain AC731_013960 PF03330 Lytic transglycolase AC731_013965 PF01098 Cell cycle protein AC731_013970 PF00905 Penicillin binding protein transpeptidase domain AC731_013970 PF03717 Penicillin-binding Protein dimerisation domain AC731_013990 PF02686 Glu-tRNAGln amidotransferase C subunit AC731_013995 PF01425 Amidase AC731_014005 PF02934 GatB/GatE catalytic domain AC731_014005 PF02637 GatB domain AC731_014010 PF04143 Sulphur transport AC731_014015 PF13230 Glutamine amidotransferases class-II AC731_014030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_014030 PF00512 His Kinase A (phospho-acceptor) domain AC731_014030 PF00989 PAS fold AC731_014030 PF11808 Phosphate regulon sensor protein PhoR AC731_014035 PF00072 Response regulator receiver domain AC731_014035 PF00486 Transcriptional regulatory protein, C terminal AC731_014045 PF01209 ubiE/COQ5 methyltransferase family AC731_014060 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AC731_014060 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AC731_014065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC731_014065 PF02874 ATP synthase alpha/beta family, beta-barrel domain AC731_014070 PF00231 ATP synthase AC731_014075 PF02874 ATP synthase alpha/beta family, beta-barrel domain AC731_014075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AC731_014075 PF00306 ATP synthase alpha/beta chain, C terminal domain AC731_014080 PF00213 ATP synthase delta (OSCP) subunit AC731_014085 PF00430 ATP synthase B/B' CF(0) AC731_014090 PF00137 ATP synthase subunit C AC731_014095 PF00119 ATP synthase A chain AC731_014115 PF17762 HTH domain found in ParB protein AC731_014115 PF02195 ParB-like nuclease domain AC731_014120 PF13614 AAA domain AC731_014125 PF02527 rRNA small subunit methyltransferase G AC731_014130 PF13932 GidA associated domain AC731_014130 PF01134 Glucose inhibited division protein A AC731_014135 PF00378 Enoyl-CoA hydratase/isomerase AC731_014140 PF00583 Acetyltransferase (GNAT) family AC731_014140 PF13607 Succinyl-CoA ligase like flavodoxin domain AC731_014140 PF13380 CoA binding domain AC731_014145 PF00378 Enoyl-CoA hydratase/isomerase AC731_014155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_014155 PF03459 TOBE domain AC731_014160 PF12849 PBP superfamily domain AC731_014165 PF01037 Lrp/AsnC ligand binding domain AC731_014170 PF00682 HMGL-like AC731_014170 PF08502 LeuA allosteric (dimerisation) domain AC731_014180 PF00990 Diguanylate cyclase, GGDEF domain AC731_014180 PF00563 EAL domain AC731_014180 PF03707 Bacterial signalling protein N terminal repeat AC731_014190 PF00990 Diguanylate cyclase, GGDEF domain AC731_014190 PF03707 Bacterial signalling protein N terminal repeat AC731_014190 PF00563 EAL domain AC731_014195 PF00664 ABC transporter transmembrane region AC731_014195 PF00005 ABC transporter AC731_014210 PF01048 Phosphorylase superfamily AC731_014210 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AC731_014225 PF01595 Cyclin M transmembrane N-terminal domain AC731_014225 PF03471 Transporter associated domain AC731_014225 PF00571 CBS domain AC731_014230 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AC731_014235 PF08534 Redoxin AC731_014255 PF00182 Chitinase class I AC731_014265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AC731_014270 PF01903 CbiX AC731_014275 PF02570 Precorrin-8X methylmutase AC731_014280 PF01888 CbiD AC731_014285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AC731_014290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AC731_014295 PF11761 Cobalamin biosynthesis central region AC731_014295 PF11760 Cobalamin synthesis G N-terminal AC731_014295 PF01890 Cobalamin synthesis G C-terminus AC731_014315 PF03547 Membrane transport protein AC731_014320 PF00392 Bacterial regulatory proteins, gntR family AC731_014320 PF07729 FCD domain AC731_014325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AC731_014325 PF13378 Enolase C-terminal domain-like AC731_014330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AC731_014330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AC731_014335 PF03328 HpcH/HpaI aldolase/citrate lyase family AC731_014340 PF01370 NAD dependent epimerase/dehydratase family AC731_014345 PF03480 Bacterial extracellular solute-binding protein, family 7 AC731_014355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC731_014360 PF10282 Lactonase, 7-bladed beta-propeller AC731_014365 PF08666 SAF domain AC731_014365 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AC731_014375 PF02595 Glycerate kinase family AC731_014380 PF05651 Putative sugar diacid recognition AC731_014380 PF17853 GGDEF-like domain AC731_014380 PF13556 PucR C-terminal helix-turn-helix domain AC731_014395 PF00009 Elongation factor Tu GTP binding domain AC731_014395 PF03144 Elongation factor Tu domain 2 AC731_014395 PF16658 Class II release factor RF3, C-terminal domain AC731_014400 PF00672 HAMP domain AC731_014400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_014410 PF01145 SPFH domain / Band 7 family AC731_014420 PF04381 Putative exonuclease, RdgC AC731_014430 PF00849 RNA pseudouridylate synthase AC731_014430 PF01479 S4 domain AC731_014445 PF09285 Elongation factor P, C-terminal AC731_014445 PF08207 Elongation factor P (EF-P) KOW-like domain AC731_014445 PF01132 Elongation factor P (EF-P) OB domain AC731_014455 PF17755 UvrA DNA-binding domain AC731_014455 PF17760 UvrA interaction domain AC731_014465 PF12833 Helix-turn-helix domain AC731_014475 PF06433 Methylamine dehydrogenase heavy chain (MADH) AC731_014480 PF07291 Methylamine utilisation protein MauE AC731_014485 PF00578 AhpC/TSA family AC731_014490 PF02975 Methylamine dehydrogenase, L chain AC731_014495 PF03150 Di-haem cytochrome c peroxidase AC731_014505 PF12838 4Fe-4S dicluster domain AC731_014510 PF13187 4Fe-4S dicluster domain AC731_014510 PF12801 4Fe-4S binding domain AC731_014515 PF00127 Copper binding proteins, plastocyanin/azurin family AC731_014520 PF01322 Cytochrome C' AC731_014525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_014525 PF00672 HAMP domain AC731_014530 PF17820 PDZ domain AC731_014530 PF13180 PDZ domain AC731_014535 PF07715 TonB-dependent Receptor Plug Domain AC731_014535 PF00593 TonB dependent receptor AC731_014540 PF03466 LysR substrate binding domain AC731_014540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_014545 PF01751 Toprim domain AC731_014545 PF01131 DNA topoisomerase AC731_014550 PF04361 Protein of unknown function (DUF494) AC731_014555 PF17782 DprA winged helix domain AC731_014555 PF02481 DNA recombination-mediator protein A AC731_014560 PF01476 LysM domain AC731_014565 PF01327 Polypeptide deformylase AC731_014570 PF02911 Formyl transferase, C-terminal domain AC731_014570 PF00551 Formyl transferase AC731_014575 PF01435 Peptidase family M48 AC731_014580 PF12795 Mechanosensitive ion channel porin domain AC731_014580 PF12794 Mechanosensitive ion channel inner membrane domain 1 AC731_014580 PF00924 Mechanosensitive ion channel AC731_014590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_014590 PF03466 LysR substrate binding domain AC731_014595 PF06779 Uncharacterised MFS-type transporter YbfB AC731_014600 PF03971 Monomeric isocitrate dehydrogenase AC731_014610 PF01814 Hemerythrin HHE cation binding domain AC731_014620 PF01676 Metalloenzyme superfamily AC731_014620 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AC731_014625 PF01863 Protein of unknown function DUF45 AC731_014630 PF01322 Cytochrome C' AC731_014635 PF00990 Diguanylate cyclase, GGDEF domain AC731_014635 PF05230 MASE2 domain AC731_014645 PF13614 AAA domain AC731_014660 PF01062 Bestrophin, RFP-TM, chloride channel AC731_014665 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AC731_014665 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AC731_014670 PF03573 outer membrane porin, OprD family AC731_014685 PF00072 Response regulator receiver domain AC731_014685 PF00990 Diguanylate cyclase, GGDEF domain AC731_014690 PF00392 Bacterial regulatory proteins, gntR family AC731_014690 PF07729 FCD domain AC731_014695 PF01925 Sulfite exporter TauE/SafE AC731_014700 PF01425 Amidase AC731_014715 PF00528 Binding-protein-dependent transport system inner membrane component AC731_014720 PF00005 ABC transporter AC731_014725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_014725 PF00204 DNA gyrase B AC731_014725 PF00986 DNA gyrase B subunit, carboxyl terminus AC731_014725 PF18053 DNA gyrase B subunit insert domain AC731_014725 PF01751 Toprim domain AC731_014730 PF02767 DNA polymerase III beta subunit, central domain AC731_014730 PF02768 DNA polymerase III beta subunit, C-terminal domain AC731_014730 PF00712 DNA polymerase III beta subunit, N-terminal domain AC731_014735 PF11638 DnaA N-terminal domain AC731_014735 PF08299 Bacterial dnaA protein helix-turn-helix AC731_014735 PF00308 Bacterial dnaA protein AC731_014740 PF00825 Ribonuclease P AC731_014745 PF01809 Putative membrane protein insertion efficiency factor AC731_014750 PF02096 60Kd inner membrane protein AC731_014750 PF14849 YidC periplasmic domain AC731_014755 PF12631 MnmE helical domain AC731_014755 PF01926 50S ribosome-binding GTPase AC731_014755 PF10396 GTP-binding protein TrmE N-terminus AC731_014765 PF13649 Methyltransferase domain AC731_014770 PF01925 Sulfite exporter TauE/SafE AC731_014780 PF17284 Spermidine synthase tetramerisation domain AC731_014785 PF01029 NusB family AC731_014785 PF01189 16S rRNA methyltransferase RsmB/F AC731_014795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_014795 PF00672 HAMP domain AC731_014800 PF02954 Bacterial regulatory protein, Fis family AC731_014800 PF00158 Sigma-54 interaction domain AC731_014800 PF00072 Response regulator receiver domain AC731_014805 PF02080 TrkA-C domain AC731_014805 PF02254 TrkA-N domain AC731_014810 PF02386 Cation transport protein AC731_014815 PF01208 Uroporphyrinogen decarboxylase (URO-D) AC731_014820 PF00271 Helicase conserved C-terminal domain AC731_014820 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AC731_014820 PF18074 Primosomal protein N C-terminal domain AC731_014820 PF17764 3′ DNA-binding domain (3′BD) AC731_014820 PF00270 DEAD/DEAH box helicase AC731_014825 PF01966 HD domain AC731_014825 PF11871 Domain of unknown function (DUF3391) AC731_014830 PF00480 ROK family AC731_014835 PF00484 Carbonic anhydrase AC731_014855 PF07690 Major Facilitator Superfamily AC731_014865 PF07021 Methionine biosynthesis protein MetW AC731_014865 PF00561 alpha/beta hydrolase fold AC731_014870 PF00561 alpha/beta hydrolase fold AC731_014875 PF02597 ThiS family AC731_014875 PF05690 Thiazole biosynthesis protein ThiG AC731_014880 PF05690 Thiazole biosynthesis protein ThiG AC731_014885 PF02390 Putative methyltransferase AC731_014890 PF01343 Peptidase family S49 AC731_014895 PF01161 Phosphatidylethanolamine-binding protein AC731_014900 PF06969 HemN C-terminal domain AC731_014900 PF04055 Radical SAM superfamily AC731_014905 PF01725 Ham1 family AC731_014910 PF01138 3' exoribonuclease family, domain 1 AC731_014910 PF03725 3' exoribonuclease family, domain 2 AC731_014920 PF00069 Protein kinase domain AC731_014925 PF08340 Domain of unknown function (DUF1732) AC731_014925 PF03755 YicC-like family, N-terminal region AC731_014930 PF00625 Guanylate kinase AC731_014935 PF01192 RNA polymerase Rpb6 AC731_014940 PF02824 TGS domain AC731_014940 PF04607 Region found in RelA / SpoT proteins AC731_014940 PF13291 ACT domain AC731_014945 PF00990 Diguanylate cyclase, GGDEF domain AC731_014955 PF13307 Helicase C-terminal domain AC731_014955 PF04851 Type III restriction enzyme, res subunit AC731_014955 PF00929 Exonuclease AC731_014960 PF00027 Cyclic nucleotide-binding domain AC731_014960 PF00005 ABC transporter AC731_014965 PF00672 HAMP domain AC731_014965 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AC731_014965 PF07730 Histidine kinase AC731_014965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_014970 PF00072 Response regulator receiver domain AC731_014970 PF00196 Bacterial regulatory proteins, luxR family AC731_014975 PF00037 4Fe-4S binding domain AC731_014975 PF12800 4Fe-4S binding domain AC731_014975 PF13187 4Fe-4S dicluster domain AC731_014985 PF00384 Molybdopterin oxidoreductase AC731_014985 PF01568 Molydopterin dinucleotide binding domain AC731_014985 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AC731_014990 PF12838 4Fe-4S dicluster domain AC731_014990 PF12800 4Fe-4S binding domain AC731_014995 PF13237 4Fe-4S dicluster domain AC731_014995 PF12801 4Fe-4S binding domain AC731_015000 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AC731_015005 PF03264 NapC/NirT cytochrome c family, N-terminal region AC731_015010 PF00005 ABC transporter AC731_015015 PF03379 CcmB protein AC731_015020 PF01578 Cytochrome C assembly protein AC731_015030 PF03100 CcmE AC731_015035 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AC731_015035 PF01578 Cytochrome C assembly protein AC731_015040 PF08534 Redoxin AC731_015045 PF03918 Cytochrome C biogenesis protein AC731_015055 PF00842 Alanine racemase, C-terminal domain AC731_015055 PF01168 Alanine racemase, N-terminal domain AC731_015060 PF01266 FAD dependent oxidoreductase AC731_015065 PF01037 Lrp/AsnC ligand binding domain AC731_015070 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AC731_015070 PF01348 Type II intron maturase AC731_015080 PF02896 PEP-utilising enzyme, TIM barrel domain AC731_015080 PF00391 PEP-utilising enzyme, mobile domain AC731_015080 PF05524 PEP-utilising enzyme, N-terminal AC731_015085 PF00381 PTS HPr component phosphorylation site AC731_015090 PF03610 PTS system fructose IIA component AC731_015095 PF02028 BCCT, betaine/carnitine/choline family transporter AC731_015160 PF01381 Helix-turn-helix AC731_015190 PF00565 Staphylococcal nuclease homologue AC731_015200 PF00816 H-NS histone family AC731_015205 PF02586 SOS response associated peptidase (SRAP) AC731_015210 PF14319 Transposase zinc-binding domain AC731_015210 PF04986 Putative transposase AC731_015215 PF00589 Phage integrase family AC731_015215 PF13495 Phage integrase, N-terminal SAM-like domain AC731_015240 PF00689 Cation transporting ATPase, C-terminus AC731_015240 PF00690 Cation transporter/ATPase, N-terminus AC731_015260 PF13411 MerR HTH family regulatory protein AC731_015270 PF02600 Disulfide bond formation protein DsbB AC731_015275 PF13462 Thioredoxin AC731_015280 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AC731_015300 PF00873 AcrB/AcrD/AcrF family AC731_015325 PF00072 Response regulator receiver domain AC731_015325 PF00486 Transcriptional regulatory protein, C terminal AC731_015330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_015330 PF00512 His Kinase A (phospho-acceptor) domain AC731_015330 PF00672 HAMP domain AC731_015340 PF04986 Putative transposase AC731_015340 PF14319 Transposase zinc-binding domain AC731_015345 PF13495 Phage integrase, N-terminal SAM-like domain AC731_015345 PF00589 Phage integrase family AC731_015350 PF12848 ABC transporter AC731_015350 PF00005 ABC transporter AC731_015355 PF00990 Diguanylate cyclase, GGDEF domain AC731_015360 PF00196 Bacterial regulatory proteins, luxR family AC731_015360 PF00072 Response regulator receiver domain AC731_015365 PF00072 Response regulator receiver domain AC731_015365 PF01339 CheB methylesterase AC731_015370 PF05231 MASE1 AC731_015370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_015370 PF07730 Histidine kinase AC731_015380 PF12320 Type 5 capsule protein repressor C-terminal domain AC731_015380 PF00149 Calcineurin-like phosphoesterase AC731_015385 PF13476 AAA domain AC731_015390 PF00756 Putative esterase AC731_015395 PF00107 Zinc-binding dehydrogenase AC731_015395 PF08240 Alcohol dehydrogenase GroES-like domain AC731_015400 PF03466 LysR substrate binding domain AC731_015400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_015420 PF12146 Serine aminopeptidase, S33 AC731_015425 PF03480 Bacterial extracellular solute-binding protein, family 7 AC731_015435 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC731_015445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AC731_015445 PF00529 HlyD membrane-fusion protein of T1SS AC731_015450 PF00873 AcrB/AcrD/AcrF family AC731_015455 PF02321 Outer membrane efflux protein AC731_015460 PF07683 Cobalamin synthesis protein cobW C-terminal domain AC731_015460 PF02492 CobW/HypB/UreG, nucleotide-binding domain AC731_015470 PF01814 Hemerythrin HHE cation binding domain AC731_015480 PF10396 GTP-binding protein TrmE N-terminus AC731_015480 PF12631 MnmE helical domain AC731_015480 PF01926 50S ribosome-binding GTPase AC731_015505 PF01914 MarC family integral membrane protein AC731_015510 PF07715 TonB-dependent Receptor Plug Domain AC731_015510 PF00593 TonB dependent receptor AC731_015520 PF00563 EAL domain AC731_015520 PF05231 MASE1 AC731_015520 PF13426 PAS domain AC731_015520 PF00990 Diguanylate cyclase, GGDEF domain AC731_015520 PF08448 PAS fold AC731_015520 PF08447 PAS fold AC731_015525 PF17946 RecC C-terminal domain AC731_015530 PF01205 Uncharacterized protein family UPF0029 AC731_015530 PF09186 Domain of unknown function (DUF1949) AC731_015535 PF00210 Ferritin-like domain AC731_015540 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AC731_015545 PF00563 EAL domain AC731_015545 PF00990 Diguanylate cyclase, GGDEF domain AC731_015545 PF03707 Bacterial signalling protein N terminal repeat AC731_015555 PF13361 UvrD-like helicase C-terminal domain AC731_015555 PF00580 UvrD/REP helicase N-terminal domain AC731_015555 PF12705 PD-(D/E)XK nuclease superfamily AC731_015560 PF13538 UvrD-like helicase C-terminal domain AC731_015565 PF03459 TOBE domain AC731_015565 PF00005 ABC transporter AC731_015570 PF03641 Possible lysine decarboxylase AC731_015580 PF00990 Diguanylate cyclase, GGDEF domain AC731_015580 PF08448 PAS fold AC731_015595 PF13361 UvrD-like helicase C-terminal domain AC731_015595 PF00580 UvrD/REP helicase N-terminal domain AC731_015600 PF02954 Bacterial regulatory protein, Fis family AC731_015600 PF00072 Response regulator receiver domain AC731_015600 PF00158 Sigma-54 interaction domain AC731_015615 PF04343 Protein of unknown function, DUF488 AC731_015620 PF00291 Pyridoxal-phosphate dependent enzyme AC731_015625 PF14535 AMP-binding enzyme C-terminal domain AC731_015625 PF00501 AMP-binding enzyme AC731_015630 PF07669 Eco57I restriction-modification methylase AC731_015630 PF12950 TaqI-like C-terminal specificity domain AC731_015635 PF00072 Response regulator receiver domain AC731_015640 PF00512 His Kinase A (phospho-acceptor) domain AC731_015640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_015640 PF00672 HAMP domain AC731_015640 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AC731_015640 PF00072 Response regulator receiver domain AC731_015640 PF01627 Hpt domain AC731_015645 PF03480 Bacterial extracellular solute-binding protein, family 7 AC731_015650 PF00563 EAL domain AC731_015650 PF00990 Diguanylate cyclase, GGDEF domain AC731_015650 PF03707 Bacterial signalling protein N terminal repeat AC731_015675 PF13472 GDSL-like Lipase/Acylhydrolase family AC731_015685 PF00005 ABC transporter AC731_015690 PF00005 ABC transporter AC731_015690 PF12399 Branched-chain amino acid ATP-binding cassette transporter AC731_015695 PF02653 Branched-chain amino acid transport system / permease component AC731_015695 PF11862 Domain of unknown function (DUF3382) AC731_015700 PF02653 Branched-chain amino acid transport system / permease component AC731_015705 PF13458 Periplasmic binding protein AC731_015710 PF00171 Aldehyde dehydrogenase family AC731_015710 PF01619 Proline dehydrogenase AC731_015710 PF14850 DNA-binding domain of Proline dehydrogenase AC731_015710 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AC731_015715 PF01037 Lrp/AsnC ligand binding domain AC731_015725 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AC731_015725 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AC731_015730 PF02424 ApbE family AC731_015740 PF01810 LysE type translocator AC731_015745 PF03594 Benzoate membrane transport protein AC731_015750 PF00892 EamA-like transporter family AC731_015760 PF02634 FdhD/NarQ family AC731_015765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AC731_015765 PF12838 4Fe-4S dicluster domain AC731_015765 PF00384 Molybdopterin oxidoreductase AC731_015765 PF01568 Molydopterin dinucleotide binding domain AC731_015765 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AC731_015770 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AC731_015770 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AC731_015770 PF10531 SLBB domain AC731_015780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_015780 PF03466 LysR substrate binding domain AC731_015785 PF00355 Rieske [2Fe-2S] domain AC731_015785 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AC731_015790 PF00111 2Fe-2S iron-sulfur cluster binding domain AC731_015790 PF00175 Oxidoreductase NAD-binding domain AC731_015795 PF16363 GDP-mannose 4,6 dehydratase AC731_015810 PF01425 Amidase AC731_015825 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC731_015835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AC731_015840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_015840 PF03466 LysR substrate binding domain AC731_015845 PF01323 DSBA-like thioredoxin domain AC731_015855 PF00005 ABC transporter AC731_015855 PF12848 ABC transporter AC731_015860 PF11871 Domain of unknown function (DUF3391) AC731_015860 PF01966 HD domain AC731_015870 PF01842 ACT domain AC731_015870 PF00551 Formyl transferase AC731_015875 PF13840 ACT domain AC731_015875 PF00696 Amino acid kinase family AC731_015880 PF00909 Ammonium Transporter Family AC731_015885 PF00543 Nitrogen regulatory protein P-II AC731_015895 PF04380 Membrane fusogenic activity AC731_015900 PF01078 Magnesium chelatase, subunit ChlI AC731_015900 PF13335 Magnesium chelatase, subunit ChlI C-terminal AC731_015910 PF00005 ABC transporter AC731_015915 PF12399 Branched-chain amino acid ATP-binding cassette transporter AC731_015915 PF00005 ABC transporter AC731_015920 PF11862 Domain of unknown function (DUF3382) AC731_015920 PF02653 Branched-chain amino acid transport system / permease component AC731_015925 PF02653 Branched-chain amino acid transport system / permease component AC731_015930 PF13458 Periplasmic binding protein AC731_015935 PF13458 Periplasmic binding protein AC731_015950 PF02574 Homocysteine S-methyltransferase AC731_015950 PF02965 Vitamin B12 dependent methionine synthase, activation domain AC731_015950 PF02310 B12 binding domain AC731_015950 PF02607 B12 binding domain AC731_015950 PF00809 Pterin binding enzyme AC731_015955 PF00085 Thioredoxin AC731_015960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_015960 PF03466 LysR substrate binding domain AC731_015975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_015975 PF13426 PAS domain AC731_015975 PF08447 PAS fold AC731_015980 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AC731_015980 PF14572 Phosphoribosyl synthetase-associated domain AC731_016000 PF07075 Protein of unknown function (DUF1343) AC731_016015 PF05552 Conserved TM helix AC731_016015 PF00924 Mechanosensitive ion channel AC731_016025 PF00579 tRNA synthetases class I (W and Y) AC731_016030 PF13649 Methyltransferase domain AC731_016040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_016040 PF03466 LysR substrate binding domain AC731_016045 PF00005 ABC transporter AC731_016045 PF12857 TOBE-like domain AC731_016050 PF00528 Binding-protein-dependent transport system inner membrane component AC731_016055 PF00528 Binding-protein-dependent transport system inner membrane component AC731_016070 PF03466 LysR substrate binding domain AC731_016070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_016075 PF01292 Prokaryotic cytochrome b561 AC731_016085 PF04264 YceI-like domain AC731_016090 PF02678 Pirin AC731_016090 PF17954 Quercetinase C-terminal cupin domain AC731_016095 PF01053 Cys/Met metabolism PLP-dependent enzyme AC731_016100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AC731_016100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AC731_016105 PF01266 FAD dependent oxidoreductase AC731_016110 PF09339 IclR helix-turn-helix domain AC731_016110 PF01614 Bacterial transcriptional regulator AC731_016115 PF00205 Thiamine pyrophosphate enzyme, central domain AC731_016115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC731_016115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC731_016120 PF01515 Phosphate acetyl/butaryl transferase AC731_016125 PF02743 Cache domain AC731_016125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_016125 PF00672 HAMP domain AC731_016130 PF01925 Sulfite exporter TauE/SafE AC731_016140 PF09339 IclR helix-turn-helix domain AC731_016140 PF01614 Bacterial transcriptional regulator AC731_016145 PF00732 GMC oxidoreductase AC731_016145 PF05199 GMC oxidoreductase AC731_016150 PF00083 Sugar (and other) transporter AC731_016175 PF06213 Cobalamin biosynthesis protein CobT AC731_016175 PF11775 Cobalamin biosynthesis protein CobT VWA domain AC731_016180 PF12556 Cobaltochelatase CobS subunit N terminal AC731_016180 PF07728 AAA domain (dynein-related subfamily) AC731_016180 PF08406 CbbQ/NirQ/NorQ C-terminal AC731_016185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AC731_016185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AC731_016185 PF00205 Thiamine pyrophosphate enzyme, central domain AC731_016190 PF03601 Conserved hypothetical protein 698 AC731_016195 PF13667 ThiC-associated domain AC731_016195 PF01964 Radical SAM ThiC family AC731_016200 PF05690 Thiazole biosynthesis protein ThiG AC731_016200 PF02597 ThiS family AC731_016205 PF05690 Thiazole biosynthesis protein ThiG AC731_016210 PF00155 Aminotransferase class I and II AC731_016210 PF00392 Bacterial regulatory proteins, gntR family AC731_016220 PF01266 FAD dependent oxidoreductase AC731_016225 PF03480 Bacterial extracellular solute-binding protein, family 7 AC731_016230 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AC731_016235 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC731_016250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_016250 PF03466 LysR substrate binding domain AC731_016265 PF00581 Rhodanese-like domain AC731_016275 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AC731_016275 PF01565 FAD binding domain AC731_016280 PF01565 FAD binding domain AC731_016280 PF02913 FAD linked oxidases, C-terminal domain AC731_016290 PF00092 von Willebrand factor type A domain AC731_016295 PF07728 AAA domain (dynein-related subfamily) AC731_016295 PF08406 CbbQ/NirQ/NorQ C-terminal AC731_016300 PF00795 Carbon-nitrogen hydrolase AC731_016315 PF09723 Zinc ribbon domain AC731_016320 PF03069 Acetamidase/Formamidase family AC731_016325 PF00005 ABC transporter AC731_016330 PF00005 ABC transporter AC731_016340 PF11862 Domain of unknown function (DUF3382) AC731_016340 PF02653 Branched-chain amino acid transport system / permease component AC731_016350 PF00072 Response regulator receiver domain AC731_016350 PF01627 Hpt domain AC731_016350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_016350 PF00512 His Kinase A (phospho-acceptor) domain AC731_016355 PF00072 Response regulator receiver domain AC731_016360 PF01258 Prokaryotic dksA/traR C4-type zinc finger AC731_016365 PF02080 TrkA-C domain AC731_016365 PF03600 Citrate transporter AC731_016375 PF01774 UreD urease accessory protein AC731_016380 PF00547 Urease, gamma subunit AC731_016385 PF00699 Urease beta subunit AC731_016390 PF01979 Amidohydrolase family AC731_016390 PF00449 Urease alpha-subunit, N-terminal domain AC731_016395 PF05194 UreE urease accessory protein, C-terminal domain AC731_016395 PF02814 UreE urease accessory protein, N-terminal domain AC731_016400 PF01730 UreF AC731_016405 PF02492 CobW/HypB/UreG, nucleotide-binding domain AC731_016410 PF04955 HupE / UreJ protein AC731_016415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_016415 PF08447 PAS fold AC731_016415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_016415 PF08447 PAS fold AC731_016420 PF00563 EAL domain AC731_016420 PF03707 Bacterial signalling protein N terminal repeat AC731_016420 PF00990 Diguanylate cyclase, GGDEF domain AC731_016425 PF00962 Adenosine/AMP deaminase AC731_016435 PF00171 Aldehyde dehydrogenase family AC731_016440 PF00171 Aldehyde dehydrogenase family AC731_016445 PF01565 FAD binding domain AC731_016445 PF02913 FAD linked oxidases, C-terminal domain AC731_016460 PF00085 Thioredoxin AC731_016465 PF03358 NADPH-dependent FMN reductase AC731_016490 PF00860 Permease family AC731_016505 PF05957 Bacterial protein of unknown function (DUF883) AC731_016510 PF01209 ubiE/COQ5 methyltransferase family AC731_016515 PF03372 Endonuclease/Exonuclease/phosphatase family AC731_016520 PF00156 Phosphoribosyl transferase domain AC731_016530 PF02146 Sir2 family AC731_016540 PF01042 Endoribonuclease L-PSP AC731_016545 PF09335 SNARE associated Golgi protein AC731_016560 PF01171 PP-loop family AC731_016585 PF01743 Poly A polymerase head domain AC731_016585 PF01966 HD domain AC731_016585 PF12627 Probable RNA and SrmB- binding site of polymerase A AC731_016600 PF14718 Soluble lytic murein transglycosylase L domain AC731_016600 PF01464 Transglycosylase SLT domain AC731_016605 PF01812 5-formyltetrahydrofolate cyclo-ligase family AC731_016610 PF00291 Pyridoxal-phosphate dependent enzyme AC731_016610 PF00585 C-terminal regulatory domain of Threonine dehydratase AC731_016615 PF02603 HPr Serine kinase N terminus AC731_016615 PF07475 HPr Serine kinase C-terminal domain AC731_016620 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AC731_016625 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AC731_016630 PF00309 Sigma-54 factor, Activator interacting domain (AID) AC731_016630 PF04963 Sigma-54 factor, core binding domain AC731_016630 PF04552 Sigma-54, DNA binding domain AC731_016635 PF12399 Branched-chain amino acid ATP-binding cassette transporter AC731_016635 PF00005 ABC transporter AC731_016640 PF02631 RecX family AC731_016645 PF00154 recA bacterial DNA recombination protein AC731_016650 PF02464 Competence-damaged protein AC731_016655 PF04608 Phosphatidylglycerophosphatase A AC731_016660 PF00586 AIR synthase related protein, N-terminal domain AC731_016660 PF02769 AIR synthase related protein, C-terminal domain AC731_016680 PF00474 Sodium:solute symporter family AC731_016685 PF00202 Aminotransferase class-III AC731_016690 PF03109 ABC1 family AC731_016695 PF05746 DALR anticodon binding domain AC731_016695 PF00750 tRNA synthetases class I (R) AC731_016695 PF03485 Arginyl tRNA synthetase N terminal domain AC731_016705 PF13462 Thioredoxin AC731_016725 PF01497 Periplasmic binding protein AC731_016735 PF13542 Helix-turn-helix domain of transposase family ISL3 AC731_016735 PF01610 Transposase AC731_016735 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AC731_016740 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AC731_016740 PF00561 alpha/beta hydrolase fold AC731_016750 PF13411 MerR HTH family regulatory protein AC731_016760 PF00484 Carbonic anhydrase AC731_016765 PF00108 Thiolase, N-terminal domain AC731_016765 PF02803 Thiolase, C-terminal domain AC731_016770 PF02770 Acyl-CoA dehydrogenase, middle domain AC731_016770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC731_016770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC731_016775 PF07690 Major Facilitator Superfamily AC731_016780 PF03466 LysR substrate binding domain AC731_016780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_016785 PF04303 PrpF protein AC731_016790 PF04909 Amidohydrolase AC731_016795 PF03737 Aldolase/RraA AC731_016800 PF04909 Amidohydrolase AC731_016805 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AC731_016810 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AC731_016815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AC731_016820 PF00248 Aldo/keto reductase family AC731_016840 PF00890 FAD binding domain AC731_016850 PF12833 Helix-turn-helix domain AC731_016850 PF02311 AraC-like ligand binding domain AC731_016855 PF12729 Four helix bundle sensory module for signal transduction AC731_016855 PF00672 HAMP domain AC731_016855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_016870 PF03480 Bacterial extracellular solute-binding protein, family 7 AC731_016875 PF01220 Dehydroquinase class II AC731_016880 PF03466 LysR substrate binding domain AC731_016880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_016890 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AC731_016895 PF03480 Bacterial extracellular solute-binding protein, family 7 AC731_016905 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC731_016910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AC731_016920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AC731_016925 PF00582 Universal stress protein family AC731_016930 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AC731_016930 PF08501 Shikimate dehydrogenase substrate binding domain AC731_016935 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC731_016940 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AC731_016945 PF09339 IclR helix-turn-helix domain AC731_016945 PF01614 Bacterial transcriptional regulator AC731_016950 PF01970 Tripartite tricarboxylate transporter TctA family AC731_016965 PF09339 IclR helix-turn-helix domain AC731_016965 PF01614 Bacterial transcriptional regulator AC731_016970 PF00890 FAD binding domain AC731_016985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AC731_016985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AC731_017005 PF01488 Shikimate / quinate 5-dehydrogenase AC731_017005 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AC731_017005 PF08501 Shikimate dehydrogenase substrate binding domain AC731_017010 PF13419 Haloacid dehalogenase-like hydrolase AC731_017015 PF01494 FAD binding domain AC731_017035 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AC731_017035 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AC731_017040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_017040 PF03466 LysR substrate binding domain AC731_017045 PF03315 Serine dehydratase beta chain AC731_017045 PF03313 Serine dehydratase alpha chain AC731_017050 PF04851 Type III restriction enzyme, res subunit AC731_017050 PF08463 EcoEI R protein C-terminal AC731_017050 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AC731_017050 PF00271 Helicase conserved C-terminal domain AC731_017060 PF02384 N-6 DNA Methylase AC731_017065 PF01420 Type I restriction modification DNA specificity domain AC731_017070 PF03061 Thioesterase superfamily AC731_017090 PF02311 AraC-like ligand binding domain AC731_017090 PF12833 Helix-turn-helix domain AC731_017095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC731_017095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC731_017095 PF02770 Acyl-CoA dehydrogenase, middle domain AC731_017115 PF01039 Carboxyl transferase domain AC731_017120 PF00378 Enoyl-CoA hydratase/isomerase AC731_017125 PF00289 Biotin carboxylase, N-terminal domain AC731_017125 PF00364 Biotin-requiring enzyme AC731_017125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC731_017125 PF02785 Biotin carboxylase C-terminal domain AC731_017130 PF13193 AMP-binding enzyme C-terminal domain AC731_017130 PF00501 AMP-binding enzyme AC731_017135 PF00682 HMGL-like AC731_017145 PF00753 Metallo-beta-lactamase superfamily AC731_017145 PF16123 Hydroxyacylglutathione hydrolase C-terminus AC731_017150 PF00664 ABC transporter transmembrane region AC731_017150 PF00005 ABC transporter AC731_017160 PF01494 FAD binding domain AC731_017165 PF12833 Helix-turn-helix domain AC731_017165 PF14525 AraC-binding-like domain AC731_017180 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit AC731_017195 PF00171 Aldehyde dehydrogenase family AC731_017205 PF01235 Sodium:alanine symporter family AC731_017210 PF03668 P-loop ATPase protein family AC731_017225 PF01738 Dienelactone hydrolase family AC731_017230 PF01176 Translation initiation factor 1A / IF-1 AC731_017235 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AC731_017250 PF06508 Queuosine biosynthesis protein QueC AC731_017255 PF04055 Radical SAM superfamily AC731_017265 PF00691 OmpA family AC731_017270 PF04052 TolB amino-terminal domain AC731_017270 PF07676 WD40-like Beta Propeller Repeat AC731_017280 PF02472 Biopolymer transport protein ExbD/TolR AC731_017285 PF01618 MotA/TolQ/ExbB proton channel family AC731_017290 PF03061 Thioesterase superfamily AC731_017300 PF00227 Proteasome subunit AC731_017305 PF00004 ATPase family associated with various cellular activities (AAA) AC731_017305 PF07724 AAA domain (Cdc48 subfamily) AC731_017305 PF10431 C-terminal, D2-small domain, of ClpB protein AC731_017320 PF01145 SPFH domain / Band 7 family AC731_017320 PF16200 C-terminal region of band_7 AC731_017330 PF01479 S4 domain AC731_017345 PF00009 Elongation factor Tu GTP binding domain AC731_017350 PF01507 Phosphoadenosine phosphosulfate reductase family AC731_017355 PF01507 Phosphoadenosine phosphosulfate reductase family AC731_017365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AC731_017365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AC731_017370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_017370 PF03466 LysR substrate binding domain AC731_017375 PF00710 Asparaginase, N-terminal AC731_017375 PF17763 Glutaminase/Asparaginase C-terminal domain AC731_017380 PF02254 TrkA-N domain AC731_017380 PF00999 Sodium/hydrogen exchanger family AC731_017385 PF00005 ABC transporter AC731_017385 PF00664 ABC transporter transmembrane region AC731_017395 PF02770 Acyl-CoA dehydrogenase, middle domain AC731_017395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC731_017395 PF09317 Domain of unknown function (DUF1974) AC731_017395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC731_017400 PF00108 Thiolase, N-terminal domain AC731_017400 PF02803 Thiolase, C-terminal domain AC731_017405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC731_017405 PF00378 Enoyl-CoA hydratase/isomerase AC731_017405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC731_017410 PF03061 Thioesterase superfamily AC731_017415 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AC731_017420 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AC731_017420 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AC731_017420 PF00378 Enoyl-CoA hydratase/isomerase AC731_017425 PF00108 Thiolase, N-terminal domain AC731_017425 PF02803 Thiolase, C-terminal domain AC731_017430 PF11973 NQRA C-terminal domain AC731_017430 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AC731_017435 PF03116 NQR2, RnfD, RnfE family AC731_017440 PF04205 FMN-binding domain AC731_017445 PF02508 Rnf-Nqr subunit, membrane protein AC731_017450 PF02508 Rnf-Nqr subunit, membrane protein AC731_017455 PF00970 Oxidoreductase FAD-binding domain AC731_017455 PF00175 Oxidoreductase NAD-binding domain AC731_017455 PF00111 2Fe-2S iron-sulfur cluster binding domain AC731_017460 PF00378 Enoyl-CoA hydratase/isomerase AC731_017480 PF02623 FliW protein AC731_017485 PF01042 Endoribonuclease L-PSP AC731_017490 PF17191 RecG wedge domain AC731_017490 PF00271 Helicase conserved C-terminal domain AC731_017490 PF00270 DEAD/DEAH box helicase AC731_017495 PF04345 Chorismate lyase AC731_017500 PF01040 UbiA prenyltransferase family AC731_017505 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AC731_017510 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AC731_017530 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AC731_017530 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AC731_017535 PF01491 Frataxin-like domain AC731_017540 PF00912 Transglycosylase AC731_017540 PF17092 Penicillin-binding protein OB-like domain AC731_017540 PF00905 Penicillin binding protein transpeptidase domain AC731_017565 PF00263 Bacterial type II and III secretion system protein AC731_017565 PF03958 Bacterial type II/III secretion system short domain AC731_017565 PF11741 AMIN domain AC731_017565 PF07660 Secretin and TonB N terminus short domain AC731_017570 PF01202 Shikimate kinase AC731_017575 PF01761 3-dehydroquinate synthase AC731_017580 PF13286 Phosphohydrolase-associated domain AC731_017580 PF01966 HD domain AC731_017585 PF00310 Glutamine amidotransferases class-II AC731_017585 PF04898 Glutamate synthase central domain AC731_017585 PF01493 GXGXG motif AC731_017585 PF01645 Conserved region in glutamate synthase AC731_017590 PF07992 Pyridine nucleotide-disulphide oxidoreductase AC731_017590 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AC731_017595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AC731_017600 PF00360 Phytochrome region AC731_017600 PF00990 Diguanylate cyclase, GGDEF domain AC731_017600 PF00563 EAL domain AC731_017600 PF01590 GAF domain AC731_017615 PF00155 Aminotransferase class I and II AC731_017615 PF00392 Bacterial regulatory proteins, gntR family AC731_017630 PF00871 Acetokinase family AC731_017635 PF01515 Phosphate acetyl/butaryl transferase AC731_017640 PF12804 MobA-like NTP transferase domain AC731_017640 PF00132 Bacterial transferase hexapeptide (six repeats) AC731_017645 PF01380 SIS domain AC731_017650 PF12801 4Fe-4S binding domain AC731_017650 PF13746 4Fe-4S dicluster domain AC731_017650 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AC731_017665 PF00392 Bacterial regulatory proteins, gntR family AC731_017665 PF00155 Aminotransferase class I and II AC731_017670 PF00589 Phage integrase family AC731_017670 PF02899 Phage integrase, N-terminal SAM-like domain AC731_017680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_017680 PF00672 HAMP domain AC731_017680 PF00512 His Kinase A (phospho-acceptor) domain AC731_017685 PF00072 Response regulator receiver domain AC731_017685 PF00486 Transcriptional regulatory protein, C terminal AC731_017705 PF07731 Multicopper oxidase AC731_017705 PF00394 Multicopper oxidase AC731_017705 PF07732 Multicopper oxidase AC731_017730 PF00873 AcrB/AcrD/AcrF family AC731_017740 PF04945 YHS domain AC731_017760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_017760 PF00672 HAMP domain AC731_017760 PF02743 Cache domain AC731_017765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AC731_017765 PF08447 PAS fold AC731_017775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_017775 PF00512 His Kinase A (phospho-acceptor) domain AC731_017775 PF00072 Response regulator receiver domain AC731_017775 PF17149 Periplasmic sensor domain found in signal transduction proteins AC731_017775 PF00672 HAMP domain AC731_017775 PF01627 Hpt domain AC731_017785 PF01810 LysE type translocator AC731_017790 PF08803 Putative mono-oxygenase ydhR AC731_017800 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AC731_017800 PF12833 Helix-turn-helix domain AC731_017805 PF12399 Branched-chain amino acid ATP-binding cassette transporter AC731_017805 PF00005 ABC transporter AC731_017815 PF02653 Branched-chain amino acid transport system / permease component AC731_017820 PF13458 Periplasmic binding protein AC731_017825 PF00005 ABC transporter AC731_017830 PF00501 AMP-binding enzyme AC731_017835 PF00378 Enoyl-CoA hydratase/isomerase AC731_017840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AC731_017840 PF02770 Acyl-CoA dehydrogenase, middle domain AC731_017840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AC731_017845 PF00108 Thiolase, N-terminal domain AC731_017845 PF02803 Thiolase, C-terminal domain AC731_017850 PF00106 short chain dehydrogenase AC731_017855 PF13193 AMP-binding enzyme C-terminal domain AC731_017855 PF00501 AMP-binding enzyme AC731_017860 PF02515 CoA-transferase family III AC731_017880 PF01594 AI-2E family transporter AC731_017890 PF04055 Radical SAM superfamily AC731_017890 PF01938 TRAM domain AC731_017890 PF00919 Uncharacterized protein family UPF0004 AC731_017895 PF02562 PhoH-like protein AC731_017900 PF02130 Uncharacterized protein family UPF0054 AC731_017905 PF00571 CBS domain AC731_017905 PF03471 Transporter associated domain AC731_017910 PF00795 Carbon-nitrogen hydrolase AC731_017915 PF02091 Glycyl-tRNA synthetase alpha subunit AC731_017920 PF02092 Glycyl-tRNA synthetase beta subunit AC731_017920 PF05746 DALR anticodon binding domain AC731_017930 PF01553 Acyltransferase AC731_017935 PF01329 Pterin 4 alpha carbinolamine dehydratase AC731_017945 PF00378 Enoyl-CoA hydratase/isomerase AC731_017950 PF03968 OstA-like protein AC731_017960 PF01380 SIS domain AC731_017960 PF00571 CBS domain AC731_017995 PF00482 Type II secretion system (T2SS), protein F AC731_018000 PF00437 Type II/IV secretion system protein AC731_018005 PF03958 Bacterial type II/III secretion system short domain AC731_018005 PF00263 Bacterial type II and III secretion system protein AC731_018010 PF00005 ABC transporter AC731_018015 PF02405 Permease MlaE AC731_018020 PF02470 MlaD protein AC731_018040 PF00005 ABC transporter AC731_018045 PF01061 ABC-2 type transporter AC731_018055 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AC731_018060 PF14760 Rnk N-terminus AC731_018060 PF01272 Transcription elongation factor, GreA/GreB, C-term AC731_018065 PF01634 ATP phosphoribosyltransferase AC731_018070 PF00815 Histidinol dehydrogenase AC731_018075 PF00155 Aminotransferase class I and II AC731_018080 PF00475 Imidazoleglycerol-phosphate dehydratase AC731_018085 PF00117 Glutamine amidotransferase class-I AC731_018090 PF00977 Histidine biosynthesis protein AC731_018095 PF00977 Histidine biosynthesis protein AC731_018100 PF01502 Phosphoribosyl-AMP cyclohydrolase AC731_018105 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AC731_018115 PF02416 mttA/Hcf106 family AC731_018120 PF02416 mttA/Hcf106 family AC731_018125 PF00902 Sec-independent protein translocase protein (TatC) AC731_018130 PF17820 PDZ domain AC731_018130 PF13180 PDZ domain AC731_018135 PF01784 NIF3 (NGG1p interacting factor 3) AC731_018150 PF08442 ATP-grasp domain AC731_018150 PF00549 CoA-ligase AC731_018155 PF00549 CoA-ligase AC731_018155 PF02629 CoA binding domain AC731_018165 PF12706 Beta-lactamase superfamily domain AC731_018170 PF00437 Type II/IV secretion system protein AC731_018170 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AC731_018180 PF13419 Haloacid dehalogenase-like hydrolase AC731_018185 PF00425 chorismate binding enzyme AC731_018185 PF04715 Anthranilate synthase component I, N terminal region AC731_018190 PF00117 Glutamine amidotransferase class-I AC731_018195 PF00591 Glycosyl transferase family, a/b domain AC731_018195 PF02885 Glycosyl transferase family, helical bundle domain AC731_018200 PF00218 Indole-3-glycerol phosphate synthase AC731_018210 PF01625 Peptide methionine sulfoxide reductase AC731_018215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AC731_018220 PF13404 AsnC-type helix-turn-helix domain AC731_018220 PF01037 Lrp/AsnC ligand binding domain AC731_018225 PF00209 Sodium:neurotransmitter symporter family AC731_018235 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AC731_018235 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AC731_018245 PF03707 Bacterial signalling protein N terminal repeat AC731_018245 PF00563 EAL domain AC731_018245 PF00990 Diguanylate cyclase, GGDEF domain AC731_018250 PF00512 His Kinase A (phospho-acceptor) domain AC731_018250 PF00672 HAMP domain AC731_018250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_018250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AC731_018250 PF01627 Hpt domain AC731_018250 PF00072 Response regulator receiver domain AC731_018260 PF00570 HRDC domain AC731_018260 PF16124 RecQ zinc-binding AC731_018260 PF09382 RQC domain AC731_018260 PF00270 DEAD/DEAH box helicase AC731_018260 PF00271 Helicase conserved C-terminal domain AC731_018310 PF00106 short chain dehydrogenase AC731_018320 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AC731_018320 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AC731_018325 PF00115 Cytochrome C and Quinol oxidase polypeptide I AC731_018330 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AC731_018340 PF00510 Cytochrome c oxidase subunit III AC731_018365 PF01040 UbiA prenyltransferase family AC731_018370 PF02630 SCO1/SenC AC731_018375 PF04542 Sigma-70 region 2 AC731_018375 PF04545 Sigma-70, region 4 AC731_018375 PF00140 Sigma-70 factor, region 1.2 AC731_018380 PF13609 Gram-negative porin AC731_018385 PF13609 Gram-negative porin AC731_018390 PF00149 Calcineurin-like phosphoesterase AC731_018405 PF01230 HIT domain AC731_018410 PF00294 pfkB family carbohydrate kinase AC731_018430 PF02785 Biotin carboxylase C-terminal domain AC731_018430 PF00289 Biotin carboxylase, N-terminal domain AC731_018430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AC731_018435 PF00364 Biotin-requiring enzyme AC731_018440 PF00578 AhpC/TSA family AC731_018450 PF01225 Mur ligase family, catalytic domain AC731_018450 PF02875 Mur ligase family, glutamate ligase domain AC731_018450 PF08245 Mur ligase middle domain AC731_018455 PF04972 BON domain AC731_018460 PF13580 SIS domain AC731_018465 PF02021 Uncharacterised protein family UPF0102 AC731_018470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AC731_018475 PF01979 Amidohydrolase family AC731_018490 PF02381 MraZ protein, putative antitoxin-like AC731_018495 PF01795 MraW methylase family AC731_018500 PF04999 Cell division protein FtsL AC731_018505 PF00905 Penicillin binding protein transpeptidase domain AC731_018505 PF03717 Penicillin-binding Protein dimerisation domain AC731_018510 PF08245 Mur ligase middle domain AC731_018510 PF01225 Mur ligase family, catalytic domain AC731_018510 PF02875 Mur ligase family, glutamate ligase domain AC731_018515 PF08245 Mur ligase middle domain AC731_018515 PF01225 Mur ligase family, catalytic domain AC731_018515 PF02875 Mur ligase family, glutamate ligase domain AC731_018520 PF00953 Glycosyl transferase family 4 AC731_018520 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AC731_018525 PF08245 Mur ligase middle domain AC731_018530 PF01098 Cell cycle protein AC731_018535 PF04101 Glycosyltransferase family 28 C-terminal domain AC731_018535 PF03033 Glycosyltransferase family 28 N-terminal domain AC731_018540 PF08245 Mur ligase middle domain AC731_018540 PF02875 Mur ligase family, glutamate ligase domain AC731_018540 PF01225 Mur ligase family, catalytic domain AC731_018545 PF07478 D-ala D-ala ligase C-terminus AC731_018545 PF01820 D-ala D-ala ligase N-terminus AC731_018550 PF08478 POTRA domain, FtsQ-type AC731_018550 PF03799 Cell division protein FtsQ AC731_018555 PF02491 SHS2 domain inserted in FTSA AC731_018560 PF00091 Tubulin/FtsZ family, GTPase domain AC731_018560 PF12327 FtsZ family, C-terminal domain AC731_018565 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AC731_018580 PF07517 SecA DEAD-like domain AC731_018580 PF02810 SEC-C motif AC731_018580 PF07516 SecA Wing and Scaffold domain AC731_018580 PF01043 SecA preprotein cross-linking domain AC731_018585 PF00072 Response regulator receiver domain AC731_018585 PF02954 Bacterial regulatory protein, Fis family AC731_018585 PF00158 Sigma-54 interaction domain AC731_018620 PF01960 ArgJ family AC731_018625 PF04379 ApaG domain AC731_018630 PF08328 Adenylosuccinate lyase C-terminal AC731_018630 PF00206 Lyase AC731_018640 PF07549 SecD/SecF GG Motif AC731_018640 PF02355 Protein export membrane protein AC731_018645 PF02355 Protein export membrane protein AC731_018645 PF13721 SecD export protein N-terminal TM region AC731_018645 PF07549 SecD/SecF GG Motif AC731_018650 PF02699 Preprotein translocase subunit AC731_018655 PF01702 Queuine tRNA-ribosyltransferase AC731_018660 PF02547 Queuosine biosynthesis protein AC731_018670 PF00589 Phage integrase family AC731_018705 PF03466 LysR substrate binding domain AC731_018705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_018715 PF03480 Bacterial extracellular solute-binding protein, family 7 AC731_018725 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC731_018730 PF00392 Bacterial regulatory proteins, gntR family AC731_018730 PF07729 FCD domain AC731_018735 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AC731_018735 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AC731_018745 PF00175 Oxidoreductase NAD-binding domain AC731_018745 PF00111 2Fe-2S iron-sulfur cluster binding domain AC731_018755 PF03466 LysR substrate binding domain AC731_018755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AC731_018765 PF01027 Inhibitor of apoptosis-promoting Bax1 AC731_018770 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AC731_018775 PF11734 TilS substrate C-terminal domain AC731_018775 PF09179 TilS substrate binding domain AC731_018775 PF01171 PP-loop family AC731_018780 PF00072 Response regulator receiver domain AC731_018780 PF00196 Bacterial regulatory proteins, luxR family AC731_018785 PF00989 PAS fold AC731_018785 PF00512 His Kinase A (phospho-acceptor) domain AC731_018785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_018790 PF03480 Bacterial extracellular solute-binding protein, family 7 AC731_018795 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AC731_018800 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AC731_018805 PF00334 Nucleoside diphosphate kinase AC731_018810 PF04055 Radical SAM superfamily AC731_018820 PF13464 Domain of unknown function (DUF4115) AC731_018825 PF04551 GcpE protein AC731_018830 PF13393 Histidyl-tRNA synthetase AC731_018830 PF03129 Anticodon binding domain AC731_018840 PF13570 PQQ-like domain AC731_018840 PF13360 PQQ-like domain AC731_018845 PF01926 50S ribosome-binding GTPase AC731_018845 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AC731_018850 PF17209 Hfq protein AC731_018855 PF16360 GTP-binding GTPase Middle Region AC731_018855 PF01926 50S ribosome-binding GTPase AC731_018855 PF13167 GTP-binding GTPase N-terminal AC731_018860 PF12221 Bacterial membrane protein N terminal AC731_018860 PF01145 SPFH domain / Band 7 family AC731_018865 PF01145 SPFH domain / Band 7 family AC731_018875 PF13393 Histidyl-tRNA synthetase AC731_018880 PF00709 Adenylosuccinate synthetase AC731_018895 PF17876 Cold shock domain AC731_018895 PF00773 RNB domain AC731_018895 PF08461 Ribonuclease R winged-helix domain AC731_018895 PF00575 S1 RNA binding domain AC731_018895 PF08206 Ribonuclease B OB domain AC731_018900 PF08032 RNA 2'-O ribose methyltransferase substrate binding AC731_018900 PF00588 SpoU rRNA Methylase family AC731_018905 PF00881 Nitroreductase family AC731_018910 PF08448 PAS fold AC731_018910 PF00990 Diguanylate cyclase, GGDEF domain AC731_018910 PF00563 EAL domain AC731_018910 PF08447 PAS fold AC731_018915 PF02080 TrkA-C domain AC731_018915 PF03600 Citrate transporter AC731_018925 PF00881 Nitroreductase family AC731_018930 PF13193 AMP-binding enzyme C-terminal domain AC731_018930 PF00501 AMP-binding enzyme AC731_018940 PF02535 ZIP Zinc transporter AC731_018950 PF12169 DNA polymerase III subunits gamma and tau domain III AC731_018950 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AC731_018950 PF12170 DNA polymerase III tau subunit V interacting with alpha AC731_018955 PF02575 YbaB/EbfC DNA-binding family AC731_018960 PF02132 RecR protein AC731_018960 PF13662 Toprim domain AC731_018965 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AC731_018965 PF00355 Rieske [2Fe-2S] domain AC731_018970 PF00033 Cytochrome b/b6/petB AC731_018970 PF00032 Cytochrome b(C-terminal)/b6/petD AC731_018975 PF02167 Cytochrome C1 family AC731_018980 PF02798 Glutathione S-transferase, N-terminal domain AC731_018980 PF00043 Glutathione S-transferase, C-terminal domain AC731_018985 PF04386 Stringent starvation protein B AC731_018990 PF01814 Hemerythrin HHE cation binding domain AC731_018995 PF01266 FAD dependent oxidoreductase AC731_019000 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AC731_019010 PF00156 Phosphoribosyl transferase domain AC731_019015 PF00156 Phosphoribosyl transferase domain AC731_019015 PF01738 Dienelactone hydrolase family AC731_019020 PF13193 AMP-binding enzyme C-terminal domain AC731_019020 PF00501 AMP-binding enzyme AC731_019030 PF02779 Transketolase, pyrimidine binding domain AC731_019030 PF02780 Transketolase, C-terminal domain AC731_019030 PF00364 Biotin-requiring enzyme AC731_019035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AC731_019035 PF00364 Biotin-requiring enzyme AC731_019035 PF02817 e3 binding domain AC731_019050 PF08241 Methyltransferase domain AC731_019085 PF03176 MMPL family AC731_019090 PF00696 Amino acid kinase family AC731_019090 PF01472 PUA domain AC731_019095 PF01018 GTP1/OBG AC731_019095 PF01926 50S ribosome-binding GTPase AC731_019100 PF01016 Ribosomal L27 protein AC731_019105 PF00829 Ribosomal prokaryotic L21 protein AC731_019110 PF01740 STAS domain AC731_019110 PF00916 Sulfate permease family AC731_019125 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AC731_019130 PF02233 NAD(P) transhydrogenase beta subunit AC731_019140 PF00563 EAL domain AC731_019140 PF00990 Diguanylate cyclase, GGDEF domain AC731_019140 PF03707 Bacterial signalling protein N terminal repeat AC731_019145 PF00270 DEAD/DEAH box helicase AC731_019145 PF00271 Helicase conserved C-terminal domain AC731_019150 PF18125 RlmM ferredoxin-like domain AC731_019150 PF01728 FtsJ-like methyltransferase AC731_019160 PF13416 Bacterial extracellular solute-binding protein AC731_019165 PF00348 Polyprenyl synthetase AC731_019175 PF00817 impB/mucB/samB family AC731_019175 PF11799 impB/mucB/samB family C-terminal domain AC731_019180 PF01923 Cobalamin adenosyltransferase AC731_019185 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AC731_019185 PF01411 tRNA synthetases class II (A) AC731_019185 PF02272 DHHA1 domain AC731_019195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AC731_019195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AC731_019195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AC731_019195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AC731_019200 PF00561 alpha/beta hydrolase fold AC731_019215 PF01063 Amino-transferase class IV AC731_019220 PF00293 NUDIX domain AC731_019255 PF03710 Glutamate-ammonia ligase adenylyltransferase AC731_019255 PF08335 GlnD PII-uridylyltransferase AC731_019260 PF13116 Protein of unknown function AC731_019260 PF13502 AsmA-like C-terminal region AC731_019265 PF00795 Carbon-nitrogen hydrolase AC731_019270 PF01523 Putative modulator of DNA gyrase AC731_019275 PF04055 Radical SAM superfamily AC731_019285 PF00158 Sigma-54 interaction domain AC731_019285 PF00072 Response regulator receiver domain AC731_019295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AC731_019295 PF00512 His Kinase A (phospho-acceptor) domain AC731_019305 PF01464 Transglycosylase SLT domain AC731_019305 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AC731_019310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AC731_019310 PF04073 Aminoacyl-tRNA editing domain AC731_019310 PF03129 Anticodon binding domain AC731_019315 PF00293 NUDIX domain AC731_019325 PF03232 Ubiquinone biosynthesis protein COQ7 AC731_019330 PF02566 OsmC-like protein AC731_019335 PF00572 Ribosomal protein L13 AC731_019340 PF00380 Ribosomal protein S9/S16 AC731_019345 PF02774 Semialdehyde dehydrogenase, dimerisation domain AC731_019345 PF01118 Semialdehyde dehydrogenase, NAD binding domain AC731_019350 PF01521 Iron-sulphur cluster biosynthesis AC731_019355 PF01551 Peptidase family M23 AC731_019355 PF04225 Opacity-associated protein A LysM-like domain AC731_019360 PF01479 S4 domain AC731_019360 PF00579 tRNA synthetases class I (W and Y) AC731_019365 PF01177 Asp/Glu/Hydantoin racemase