CCZ27_00015	SM00925	MltA specific insert domain
CCZ27_00065	SM00382	ATPases associated with a variety of cellular activities
CCZ27_00065	SM00448	cheY-homologous receiver domain
CCZ27_00070	SM00387	Histidine kinase-like ATPases
CCZ27_00070	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_00080	SM01230	CCZ27_00080
CCZ27_00090	SM00450	Rhodanese Homology Domain
CCZ27_00105	SM00155	Phospholipase D. Active site motifs.
CCZ27_00110	SM00881	CoA binding domain
CCZ27_00170	SM00382	ATPases associated with a variety of cellular activities
CCZ27_00175	SM00710	Parallel beta-helix repeats
CCZ27_00175	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
CCZ27_00185	SM00900	CCZ27_00185
CCZ27_00195	SM00387	Histidine kinase-like ATPases
CCZ27_00195	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_00200	SM00448	cheY-homologous receiver domain
CCZ27_00265	SM01400	CCZ27_00265
CCZ27_00285	SM00028	Tetratricopeptide repeats
CCZ27_00290	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CCZ27_00290	SM01232	CCZ27_00290
CCZ27_00325	SM00382	ATPases associated with a variety of cellular activities
CCZ27_00325	SM00962	SRP54-type protein, GTPase domain
CCZ27_00325	SM00963	SRP54-type protein, helical bundle domain
CCZ27_00330	SM00382	ATPases associated with a variety of cellular activities
CCZ27_00350	SM00267	diguanylate cyclase
CCZ27_00355	SM00382	ATPases associated with a variety of cellular activities
CCZ27_00360	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_00465	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCZ27_00465	SM00895	CCZ27_00465
CCZ27_00470	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCZ27_00470	SM00895	CCZ27_00470
CCZ27_00510	SM00382	ATPases associated with a variety of cellular activities
CCZ27_00510	SM00989	CCZ27_00510
CCZ27_00520	SM00903	Flavin reductase like domain
CCZ27_00570	SM00052	Putative diguanylate phosphodiesterase
CCZ27_00570	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CCZ27_00570	SM00091	PAS domain
CCZ27_00570	SM00267	diguanylate cyclase
CCZ27_00605	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCZ27_00620	SM01091	Transporter associated domain
CCZ27_00645	SM00382	ATPases associated with a variety of cellular activities
CCZ27_00685	SM00563	Phosphate acyltransferases
CCZ27_00710	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCZ27_00755	SM00382	ATPases associated with a variety of cellular activities
CCZ27_00765	SM00382	ATPases associated with a variety of cellular activities
CCZ27_00795	SM00382	ATPases associated with a variety of cellular activities
CCZ27_00885	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CCZ27_00910	SM00881	CoA binding domain
CCZ27_00915	SM00240	Forkhead associated domain
CCZ27_00920	SM00849	Metallo-beta-lactamase superfamily
CCZ27_00925	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CCZ27_00970	SM00849	Metallo-beta-lactamase superfamily
CCZ27_00985	SM00966	SpoVT / AbrB like domain 
CCZ27_01015	SM00953	CCZ27_01015
CCZ27_01100	SM00422	helix_turn_helix, mercury resistance
CCZ27_01160	SM00528	Domain in histone-like proteins of HNS family
CCZ27_01190	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCZ27_01190	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCZ27_01225	SM00822	CCZ27_01225
CCZ27_01250	SM00893	Electron transfer flavoprotein domain
CCZ27_01255	SM00893	Electron transfer flavoprotein domain
CCZ27_01260	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CCZ27_01260	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CCZ27_01290	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_01335	SM00382	ATPases associated with a variety of cellular activities
CCZ27_01340	SM00382	ATPases associated with a variety of cellular activities
CCZ27_01370	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CCZ27_01390	SM01080	CCZ27_01390
CCZ27_01400	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_01445	SM00341	Helicase and RNase D C-terminal
CCZ27_01445	SM00487	DEAD-like helicases superfamily
CCZ27_01445	SM00490	helicase superfamily c-terminal domain
CCZ27_01445	SM00956	CCZ27_01445
CCZ27_01450	SM00421	helix_turn_helix, Lux Regulon
CCZ27_01540	SM00644	CCZ27_01540
CCZ27_01570	SM00382	ATPases associated with a variety of cellular activities
CCZ27_01595	SM00919	Malic enzyme, NAD binding domain
CCZ27_01595	SM01274	CCZ27_01595
CCZ27_01610	SM00346	helix_turn_helix isocitrate lyase regulation
CCZ27_01645	SM00363	S4 RNA-binding domain
CCZ27_01670	SM00382	ATPases associated with a variety of cellular activities
CCZ27_01690	SM00487	DEAD-like helicases superfamily
CCZ27_01690	SM00490	helicase superfamily c-terminal domain
CCZ27_01715	SM00382	ATPases associated with a variety of cellular activities
CCZ27_01720	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
CCZ27_01740	SM01057	Eukaryotic-type carbonic anhydrase
CCZ27_01760	SM00450	Rhodanese Homology Domain
CCZ27_01810	SM00382	ATPases associated with a variety of cellular activities
CCZ27_01825	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCZ27_01840	SM00563	Phosphate acyltransferases
CCZ27_01875	SM00878	Biotin carboxylase C-terminal domain
CCZ27_01900	SM00749	bacterial OsmY and nodulation domain
CCZ27_02000	SM00842	Cell division protein FtsA
CCZ27_02005	SM00864	Tubulin/FtsZ family, GTPase domain
CCZ27_02005	SM00865	Tubulin/FtsZ family, C-terminal domain
CCZ27_02025	SM00957	SecA DEAD-like domain
CCZ27_02025	SM00958	SecA preprotein cross-linking domain
CCZ27_02030	SM00382	ATPases associated with a variety of cellular activities
CCZ27_02095	SM01323	CCZ27_02095
CCZ27_02160	SM01091	Transporter associated domain
CCZ27_02170	SM00977	TilS substrate C-terminal domain
CCZ27_02175	SM00421	helix_turn_helix, Lux Regulon
CCZ27_02175	SM00448	cheY-homologous receiver domain
CCZ27_02180	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCZ27_02180	SM00091	PAS domain
CCZ27_02180	SM00387	Histidine kinase-like ATPases
CCZ27_02180	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_02205	SM00562	CCZ27_02205
CCZ27_02240	SM00564	beta-propeller repeat
CCZ27_02245	SM00382	ATPases associated with a variety of cellular activities
CCZ27_02260	SM00244	prohibitin homologues
CCZ27_02265	SM00244	prohibitin homologues
CCZ27_02280	SM00788	Adenylosuccinate synthetase
CCZ27_02295	SM00316	Ribosomal protein S1-like RNA-binding domain
CCZ27_02295	SM00357	Cold shock protein domain
CCZ27_02295	SM00955	CCZ27_02295
CCZ27_02300	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CCZ27_02305	SM01012	CCZ27_02305
CCZ27_02310	SM00382	ATPases associated with a variety of cellular activities
CCZ27_02330	SM00220	Serine/Threonine protein kinases, catalytic domain
CCZ27_02330	SM00331	Sigma factor PP2C-like phosphatases
CCZ27_02330	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CCZ27_02335	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CCZ27_02360	SM01060	CCZ27_02360
CCZ27_02365	SM00382	ATPases associated with a variety of cellular activities
CCZ27_02375	SM00493	CCZ27_02375
CCZ27_02460	SM01118	CCZ27_02460
CCZ27_02470	SM00883	Chaperonin 10 Kd subunit
CCZ27_02480	SM00448	cheY-homologous receiver domain
CCZ27_02480	SM00862	Transcriptional regulatory protein, C terminal
CCZ27_02485	SM00387	Histidine kinase-like ATPases
CCZ27_02485	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_02625	SM00470	ParB-like nuclease domain
CCZ27_02630	SM00470	ParB-like nuclease domain
CCZ27_02635	SM00857	Resolvase, N terminal domain
CCZ27_02705	SM00937	CCZ27_02705
CCZ27_02740	SM00100	Cyclic nucleotide-monophosphate binding domain
CCZ27_02740	SM00220	Serine/Threonine protein kinases, catalytic domain
CCZ27_02755	SM00448	cheY-homologous receiver domain
CCZ27_02755	SM00850	LytTr DNA-binding domain
CCZ27_02790	SM01209	CCZ27_02790
CCZ27_02790	SM01210	CCZ27_02790
CCZ27_02795	SM00798	AICARFT/IMPCHase bienzyme
CCZ27_02795	SM00851	MGS-like domain
CCZ27_02815	SM00382	ATPases associated with a variety of cellular activities
CCZ27_02815	SM00930	CCZ27_02815
CCZ27_02835	SM01011	Aminopeptidase P, N-terminal domain
CCZ27_02865	SM00650	Ribosomal RNA adenine dimethylases
CCZ27_02885	SM00448	cheY-homologous receiver domain
CCZ27_02900	SM00834	Putative regulatory protein
CCZ27_02935	SM00382	ATPases associated with a variety of cellular activities
CCZ27_02935	SM00962	SRP54-type protein, GTPase domain
CCZ27_02935	SM00963	SRP54-type protein, helical bundle domain
CCZ27_02945	SM00852	Probable molybdopterin binding domain
CCZ27_02985	SM00400	zinc finger
CCZ27_02985	SM00493	CCZ27_02985
CCZ27_02985	SM00766	DNA primase DnaG DnaB-binding
CCZ27_03000	SM01207	CCZ27_03000
CCZ27_03005	SM00905	Dihydroneopterin aldolase
CCZ27_03010	SM00528	Domain in histone-like proteins of HNS family
CCZ27_03065	SM00919	Malic enzyme, NAD binding domain
CCZ27_03065	SM01274	CCZ27_03065
CCZ27_03075	SM00829	Enoylreductase
CCZ27_03080	SM00481	DNA polymerase alpha chain like domain
CCZ27_03170	SM00387	Histidine kinase-like ATPases
CCZ27_03175	SM00382	ATPases associated with a variety of cellular activities
CCZ27_03175	SM00448	cheY-homologous receiver domain
CCZ27_03180	SM00028	Tetratricopeptide repeats
CCZ27_03185	SM00984	UDP binding domain
CCZ27_03190	SM00671	Sel1-like repeats.
CCZ27_03220	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_03245	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_03285	SM00382	ATPases associated with a variety of cellular activities
CCZ27_03305	SM00829	Enoylreductase
CCZ27_03310	SM00267	diguanylate cyclase
CCZ27_03310	SM00448	cheY-homologous receiver domain
CCZ27_03365	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CCZ27_03405	SM00331	Sigma factor PP2C-like phosphatases
CCZ27_03405	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CCZ27_03410	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CCZ27_03410	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CCZ27_03430	SM00052	Putative diguanylate phosphodiesterase
CCZ27_03440	SM00487	DEAD-like helicases superfamily
CCZ27_03440	SM00490	helicase superfamily c-terminal domain
CCZ27_03475	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCZ27_03590	SM00382	ATPases associated with a variety of cellular activities
CCZ27_03600	SM00382	ATPases associated with a variety of cellular activities
CCZ27_03635	SM00382	ATPases associated with a variety of cellular activities
CCZ27_03640	SM00382	ATPases associated with a variety of cellular activities
CCZ27_03650	SM00382	ATPases associated with a variety of cellular activities
CCZ27_03675	SM00382	ATPases associated with a variety of cellular activities
CCZ27_03685	SM00382	ATPases associated with a variety of cellular activities
CCZ27_03690	SM00382	ATPases associated with a variety of cellular activities
CCZ27_03710	SM01007	Class II Aldolase and Adducin N-terminal domain
CCZ27_03800	SM00917	LeuA allosteric (dimerisation) domain
CCZ27_03830	SM00831	Cation transporter/ATPase, N-terminus
CCZ27_03845	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_03860	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCZ27_03995	SM00853	MutL C terminal dimerisation domain
CCZ27_03995	SM01340	CCZ27_03995
CCZ27_04060	SM00870	CCZ27_04060
CCZ27_04120	SM00822	CCZ27_04120
CCZ27_04125	SM00822	CCZ27_04125
CCZ27_04135	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCZ27_04195	SM00923	MbtH-like protein
CCZ27_04210	SM00824	Thioesterase
CCZ27_04220	SM00823	Phosphopantetheine attachment site
CCZ27_04230	SM00823	Phosphopantetheine attachment site
CCZ27_04235	SM00823	Phosphopantetheine attachment site
CCZ27_04245	SM00823	Phosphopantetheine attachment site
CCZ27_04245	SM00824	Thioesterase
CCZ27_04285	SM00382	ATPases associated with a variety of cellular activities
CCZ27_04295	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CCZ27_04305	SM00382	ATPases associated with a variety of cellular activities
CCZ27_04330	SM00357	Cold shock protein domain
CCZ27_04330	SM00382	ATPases associated with a variety of cellular activities
CCZ27_04330	SM00959	Rho termination factor, N-terminal domain
CCZ27_04345	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCZ27_04395	SM01329	CCZ27_04395
CCZ27_04400	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CCZ27_04490	SM00840	CCZ27_04490
CCZ27_04495	SM00271	DnaJ molecular chaperone homology domain
CCZ27_04510	SM00849	Metallo-beta-lactamase superfamily
CCZ27_04525	SM00382	ATPases associated with a variety of cellular activities
CCZ27_04525	SM00989	CCZ27_04525
CCZ27_04575	SM00829	Enoylreductase
CCZ27_04585	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCZ27_04585	SM00895	CCZ27_04585
CCZ27_04600	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CCZ27_04620	SM01211	CCZ27_04620
CCZ27_04635	SM00062	Bacterial periplasmic substrate-binding proteins
CCZ27_04655	SM00382	ATPases associated with a variety of cellular activities
CCZ27_04670	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_04680	SM00421	helix_turn_helix, Lux Regulon
CCZ27_04680	SM00448	cheY-homologous receiver domain
CCZ27_04685	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCZ27_04685	SM00387	Histidine kinase-like ATPases
CCZ27_04705	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CCZ27_04710	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCZ27_04710	SM00267	diguanylate cyclase
CCZ27_04710	SM01079	CCZ27_04710
CCZ27_04715	SM00434	DNA Topoisomerase IV
CCZ27_04725	SM00830	Chorismate mutase type II
CCZ27_04745	SM00316	Ribosomal protein S1-like RNA-binding domain
CCZ27_04750	SM00411	bacterial (prokaryotic) histone like domain
CCZ27_04765	SM00984	UDP binding domain
CCZ27_04805	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CCZ27_04830	SM00873	B3/4 domain
CCZ27_04830	SM00874	tRNA synthetase B5 domain
CCZ27_04830	SM00896	Ferredoxin-fold anticodon binding domain
CCZ27_04835	SM00411	bacterial (prokaryotic) histone like domain
CCZ27_04840	SM00422	helix_turn_helix, mercury resistance
CCZ27_04855	SM00477	DNA/RNA non-specific endonuclease
CCZ27_04855	SM00892	DNA/RNA non-specific endonuclease
CCZ27_04865	SM00237	Domains in Na-Ca exchangers and integrin-beta4
CCZ27_04870	SM00237	Domains in Na-Ca exchangers and integrin-beta4
CCZ27_04905	SM00257	Lysin motif
CCZ27_04925	SM00460	Transglutaminase/protease-like homologues
CCZ27_04945	SM01130	CCZ27_04945
CCZ27_04965	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CCZ27_04990	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCZ27_04990	SM00876	Biotin and Thiamin Synthesis associated domain
CCZ27_05040	SM00382	ATPases associated with a variety of cellular activities
CCZ27_05040	SM00962	SRP54-type protein, GTPase domain
CCZ27_05065	SM00434	DNA Topoisomerase IV
CCZ27_05075	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_05090	SM00387	Histidine kinase-like ATPases
CCZ27_05090	SM00433	TopoisomeraseII
CCZ27_05150	SM00047	Lysozyme subfamily 2
CCZ27_05215	SM00382	ATPases associated with a variety of cellular activities
CCZ27_05235	SM00091	PAS domain
CCZ27_05235	SM00387	Histidine kinase-like ATPases
CCZ27_05235	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_05240	SM00382	ATPases associated with a variety of cellular activities
CCZ27_05240	SM00448	cheY-homologous receiver domain
CCZ27_05305	SM00028	Tetratricopeptide repeats
CCZ27_05330	SM00382	ATPases associated with a variety of cellular activities
CCZ27_05335	SM00382	ATPases associated with a variety of cellular activities
CCZ27_05390	SM00450	Rhodanese Homology Domain
CCZ27_05405	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_05440	SM00382	ATPases associated with a variety of cellular activities
CCZ27_05455	SM00382	ATPases associated with a variety of cellular activities
CCZ27_05500	SM00382	ATPases associated with a variety of cellular activities
CCZ27_05530	SM00062	Bacterial periplasmic substrate-binding proteins
CCZ27_05540	SM00382	ATPases associated with a variety of cellular activities
CCZ27_05620	SM00062	Bacterial periplasmic substrate-binding proteins
CCZ27_05630	SM00382	ATPases associated with a variety of cellular activities
CCZ27_05725	SM00052	Putative diguanylate phosphodiesterase
CCZ27_05775	SM00387	Histidine kinase-like ATPases
CCZ27_05780	SM00448	cheY-homologous receiver domain
CCZ27_05780	SM00850	LytTr DNA-binding domain
CCZ27_05805	SM00450	Rhodanese Homology Domain
CCZ27_05810	SM00052	Putative diguanylate phosphodiesterase
CCZ27_05815	SM00382	ATPases associated with a variety of cellular activities
CCZ27_05830	SM00062	Bacterial periplasmic substrate-binding proteins
CCZ27_05850	SM00382	ATPases associated with a variety of cellular activities
CCZ27_05860	SM00849	Metallo-beta-lactamase superfamily
CCZ27_05880	SM00564	beta-propeller repeat
CCZ27_05885	SM00421	helix_turn_helix, Lux Regulon
CCZ27_05885	SM00448	cheY-homologous receiver domain
CCZ27_05895	SM00564	beta-propeller repeat
CCZ27_05980	SM01192	CCZ27_05980
CCZ27_05980	SM01193	CCZ27_05980
CCZ27_05990	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCZ27_06060	SM01322	CCZ27_06060
CCZ27_06075	SM00487	DEAD-like helicases superfamily
CCZ27_06075	SM00490	helicase superfamily c-terminal domain
CCZ27_06080	SM00357	Cold shock protein domain
CCZ27_06105	SM00481	DNA polymerase alpha chain like domain
CCZ27_06130	SM00363	S4 RNA-binding domain
CCZ27_06140	SM00316	Ribosomal protein S1-like RNA-binding domain
CCZ27_06160	SM01387	CCZ27_06160
CCZ27_06165	SM00316	Ribosomal protein S1-like RNA-binding domain
CCZ27_06165	SM00322	K homology RNA-binding domain
CCZ27_06235	SM00481	DNA polymerase alpha chain like domain
CCZ27_06245	SM00382	ATPases associated with a variety of cellular activities
CCZ27_06255	SM00849	Metallo-beta-lactamase superfamily
CCZ27_06280	SM00479	CCZ27_06280
CCZ27_06355	SM00382	ATPases associated with a variety of cellular activities
CCZ27_06355	SM00989	CCZ27_06355
CCZ27_06395	SM00849	Metallo-beta-lactamase superfamily
CCZ27_06425	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCZ27_06425	SM00866	CCZ27_06425
CCZ27_06460	SM00861	Transketolase, pyrimidine binding domain
CCZ27_06480	SM00487	DEAD-like helicases superfamily
CCZ27_06480	SM00491	CCZ27_06480
CCZ27_06490	SM00852	Probable molybdopterin binding domain
CCZ27_06530	SM00382	ATPases associated with a variety of cellular activities
CCZ27_06560	SM00965	Secretin and TonB N terminus short domain
CCZ27_06590	SM00382	ATPases associated with a variety of cellular activities
CCZ27_06610	SM00965	Secretin and TonB N terminus short domain
CCZ27_06650	SM00387	Histidine kinase-like ATPases
CCZ27_06650	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_06655	SM00382	ATPases associated with a variety of cellular activities
CCZ27_06655	SM00448	cheY-homologous receiver domain
CCZ27_06675	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_06710	SM00887	Ethylbenzene dehydrogenase
CCZ27_06780	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCZ27_06805	SM00100	Cyclic nucleotide-monophosphate binding domain
CCZ27_06805	SM00419	helix_turn_helix, cAMP Regulatory protein
CCZ27_06810	SM00327	von Willebrand factor (vWF) type A domain
CCZ27_06840	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CCZ27_06880	SM00646	CCZ27_06880
CCZ27_06890	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCZ27_06920	SM00382	ATPases associated with a variety of cellular activities
CCZ27_06930	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCZ27_06930	SM00267	diguanylate cyclase
CCZ27_06950	SM00479	CCZ27_06950
CCZ27_06955	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCZ27_06960	SM00670	Large family of predicted nucleotide-binding domains
CCZ27_07000	SM00704	CDGSH-type zinc finger. Function unknown.
CCZ27_07035	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCZ27_07035	SM00895	CCZ27_07035
CCZ27_07095	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CCZ27_07100	SM00387	Histidine kinase-like ATPases
CCZ27_07100	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_07105	SM00448	cheY-homologous receiver domain
CCZ27_07105	SM00862	Transcriptional regulatory protein, C terminal
CCZ27_07120	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CCZ27_07120	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CCZ27_07125	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCZ27_07150	SM00487	DEAD-like helicases superfamily
CCZ27_07150	SM00490	helicase superfamily c-terminal domain
CCZ27_07155	SM00226	Low molecular weight phosphatase family
CCZ27_07160	SM00316	Ribosomal protein S1-like RNA-binding domain
CCZ27_07170	SM00363	S4 RNA-binding domain
CCZ27_07210	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CCZ27_07215	SM00822	CCZ27_07215
CCZ27_07225	SM00825	Beta-ketoacyl synthase
CCZ27_07260	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CCZ27_07285	SM00358	Double-stranded RNA binding motif
CCZ27_07285	SM00535	Ribonuclease III family
CCZ27_07320	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CCZ27_07320	SM00465	GIY-YIG type nucleases (URI domain)
CCZ27_07370	SM00642	Alpha-amylase domain
CCZ27_07375	SM00642	Alpha-amylase domain
CCZ27_07405	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_07410	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_07435	SM00878	Biotin carboxylase C-terminal domain
CCZ27_07440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCZ27_07460	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_07495	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_07555	SM00382	ATPases associated with a variety of cellular activities
CCZ27_07605	SM00382	ATPases associated with a variety of cellular activities
CCZ27_07620	SM00062	Bacterial periplasmic substrate-binding proteins
CCZ27_07630	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCZ27_07680	SM00316	Ribosomal protein S1-like RNA-binding domain
CCZ27_07680	SM00732	Likely ribonuclease with RNase H fold.
CCZ27_07700	SM00881	CoA binding domain
CCZ27_07705	SM00091	PAS domain
CCZ27_07705	SM00387	Histidine kinase-like ATPases
CCZ27_07705	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_07715	SM00450	Rhodanese Homology Domain
CCZ27_07730	SM00382	ATPases associated with a variety of cellular activities
CCZ27_07750	SM00831	Cation transporter/ATPase, N-terminus
CCZ27_07920	SM00382	ATPases associated with a variety of cellular activities
CCZ27_07945	SM00382	ATPases associated with a variety of cellular activities
CCZ27_07955	SM00244	prohibitin homologues
CCZ27_07985	SM00387	Histidine kinase-like ATPases
CCZ27_07990	SM00448	cheY-homologous receiver domain
CCZ27_07990	SM00862	Transcriptional regulatory protein, C terminal
CCZ27_08025	SM00382	ATPases associated with a variety of cellular activities
CCZ27_08095	SM00248	ankyrin repeats
CCZ27_08125	SM00763	PrkA AAA domain
CCZ27_08140	SM00382	ATPases associated with a variety of cellular activities
CCZ27_08140	SM00994	ClpX C4-type zinc finger
CCZ27_08140	SM01086	C-terminal, D2-small domain, of ClpB protein
CCZ27_08145	SM00382	ATPases associated with a variety of cellular activities
CCZ27_08145	SM00464	Found in ATP-dependent protease La (LON)
CCZ27_08150	SM00411	bacterial (prokaryotic) histone like domain
CCZ27_08160	SM00382	ATPases associated with a variety of cellular activities
CCZ27_08160	SM01086	C-terminal, D2-small domain, of ClpB protein
CCZ27_08305	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CCZ27_08330	SM00829	Enoylreductase
CCZ27_08345	SM00382	ATPases associated with a variety of cellular activities
CCZ27_08350	SM00257	Lysin motif
CCZ27_08355	SM00849	Metallo-beta-lactamase superfamily
CCZ27_08370	SM00479	CCZ27_08370
CCZ27_08380	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CCZ27_08380	SM00534	ATPase domain of DNA mismatch repair MUTS family
CCZ27_08450	SM00448	cheY-homologous receiver domain
CCZ27_08485	SM00771	ZipA, C-terminal domain (FtsZ-binding)
CCZ27_08490	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CCZ27_08490	SM00292	breast cancer carboxy-terminal domain
CCZ27_08490	SM00532	Ligase N family
CCZ27_08500	SM00838	Elongation factor G C-terminus
CCZ27_08520	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CCZ27_08565	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CCZ27_08575	SM00935	Outer membrane protein (OmpH-like)
CCZ27_08605	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CCZ27_08615	SM00631	CCZ27_08615
CCZ27_08635	SM00382	ATPases associated with a variety of cellular activities
CCZ27_08775	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_08790	SM00382	ATPases associated with a variety of cellular activities
CCZ27_08805	SM00893	Electron transfer flavoprotein domain
CCZ27_08810	SM00893	Electron transfer flavoprotein domain
CCZ27_08865	SM00822	CCZ27_08865
CCZ27_08950	SM00528	Domain in histone-like proteins of HNS family
CCZ27_09170	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_09180	SM00953	CCZ27_09180
CCZ27_09185	SM00112	Cadherin repeats.
CCZ27_09185	SM00191	Integrin alpha (beta-propellor repeats).
CCZ27_09245	SM00387	Histidine kinase-like ATPases
CCZ27_09245	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_09250	SM00448	cheY-homologous receiver domain
CCZ27_09250	SM00862	Transcriptional regulatory protein, C terminal
CCZ27_09265	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_09265	SM00478	endonuclease III
CCZ27_09265	SM01009	AlkA N-terminal domain
CCZ27_09275	SM00903	Flavin reductase like domain
CCZ27_09295	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_09300	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_09345	SM00382	ATPases associated with a variety of cellular activities
CCZ27_09355	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CCZ27_09455	SM00382	ATPases associated with a variety of cellular activities
CCZ27_09625	SM00232	JAB/MPN domain
CCZ27_09685	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_09755	SM00382	ATPases associated with a variety of cellular activities
CCZ27_09760	SM00953	CCZ27_09760
CCZ27_09775	SM00267	diguanylate cyclase
CCZ27_09775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCZ27_09790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCZ27_09790	SM00895	CCZ27_09790
CCZ27_09830	SM00382	ATPases associated with a variety of cellular activities
CCZ27_09845	SM00986	Uracil DNA glycosylase superfamily
CCZ27_09845	SM00987	UreE urease accessory protein, C-terminal domain 
CCZ27_09865	SM00448	cheY-homologous receiver domain
CCZ27_09865	SM00862	Transcriptional regulatory protein, C terminal
CCZ27_09870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCZ27_09870	SM00387	Histidine kinase-like ATPases
CCZ27_09870	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_09875	SM00849	Metallo-beta-lactamase superfamily
CCZ27_09915	SM00893	Electron transfer flavoprotein domain
CCZ27_09920	SM00893	Electron transfer flavoprotein domain
CCZ27_09955	SM00382	ATPases associated with a variety of cellular activities
CCZ27_09975	SM00954	Region found in RelA / SpoT proteins
CCZ27_10030	SM00487	DEAD-like helicases superfamily
CCZ27_10030	SM00490	helicase superfamily c-terminal domain
CCZ27_10030	SM00982	CCZ27_10030
CCZ27_10030	SM01058	CarD-like/TRCF domain
CCZ27_10060	SM00646	CCZ27_10060
CCZ27_10065	SM00904	Riboflavin kinase
CCZ27_10105	SM00861	Transketolase, pyrimidine binding domain
CCZ27_10145	SM00642	Alpha-amylase domain
CCZ27_10170	SM00271	DnaJ molecular chaperone homology domain
CCZ27_10185	SM00382	ATPases associated with a variety of cellular activities
CCZ27_10195	SM00843	CCZ27_10195
CCZ27_10200	SM00100	Cyclic nucleotide-monophosphate binding domain
CCZ27_10200	SM00419	helix_turn_helix, cAMP Regulatory protein
CCZ27_10210	SM00463	Small MutS-related domain
CCZ27_10215	SM00938	Nitrogen regulatory protein P-II
CCZ27_10270	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CCZ27_10275	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CCZ27_10335	SM00382	ATPases associated with a variety of cellular activities
CCZ27_10360	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_10380	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_10450	SM00382	ATPases associated with a variety of cellular activities
CCZ27_10455	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_10515	SM00382	ATPases associated with a variety of cellular activities
CCZ27_10585	SM00220	Serine/Threonine protein kinases, catalytic domain
CCZ27_10610	SM00487	DEAD-like helicases superfamily
CCZ27_10610	SM00490	helicase superfamily c-terminal domain
CCZ27_10640	SM00487	DEAD-like helicases superfamily
CCZ27_10695	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_10755	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CCZ27_10815	SM00382	ATPases associated with a variety of cellular activities
CCZ27_10815	SM00989	CCZ27_10815
CCZ27_10855	SM00528	Domain in histone-like proteins of HNS family
CCZ27_10865	SM00487	DEAD-like helicases superfamily
CCZ27_10865	SM00490	helicase superfamily c-terminal domain
CCZ27_10960	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCZ27_10960	SM01240	CCZ27_10960
CCZ27_11015	SM00052	Putative diguanylate phosphodiesterase
CCZ27_11015	SM00267	diguanylate cyclase
CCZ27_11015	SM01079	CCZ27_11015
CCZ27_11020	SM00382	ATPases associated with a variety of cellular activities
CCZ27_11020	SM01086	C-terminal, D2-small domain, of ClpB protein
CCZ27_11030	SM00479	CCZ27_11030
CCZ27_11035	SM00448	cheY-homologous receiver domain
CCZ27_11040	SM00387	Histidine kinase-like ATPases
CCZ27_11040	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_11060	SM00052	Putative diguanylate phosphodiesterase
CCZ27_11060	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CCZ27_11060	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCZ27_11060	SM00091	PAS domain
CCZ27_11060	SM00267	diguanylate cyclase
CCZ27_11170	SM00382	ATPases associated with a variety of cellular activities
CCZ27_11200	SM00382	ATPases associated with a variety of cellular activities
CCZ27_11210	SM01103	CCZ27_11210
CCZ27_11225	SM00851	MGS-like domain
CCZ27_11225	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CCZ27_11230	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CCZ27_11270	SM00100	Cyclic nucleotide-monophosphate binding domain
CCZ27_11270	SM00220	Serine/Threonine protein kinases, catalytic domain
CCZ27_11335	SM00945	ProQ/FINO family
CCZ27_11345	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCZ27_11370	SM00763	PrkA AAA domain
CCZ27_11385	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_11480	SM00487	DEAD-like helicases superfamily
CCZ27_11485	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCZ27_11485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCZ27_11525	SM00965	Secretin and TonB N terminus short domain
CCZ27_11605	SM00912	haemagglutination activity domain
CCZ27_11625	SM00421	helix_turn_helix, Lux Regulon
CCZ27_11630	SM00248	ankyrin repeats
CCZ27_11690	SM00052	Putative diguanylate phosphodiesterase
CCZ27_11690	SM00267	diguanylate cyclase
CCZ27_11710	SM00984	UDP binding domain
CCZ27_11875	SM00098	Alkaline phosphatase homologues
CCZ27_11885	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCZ27_11885	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CCZ27_11980	SM01001	AIR carboxylase
CCZ27_12000	SM00421	helix_turn_helix, Lux Regulon
CCZ27_12000	SM00448	cheY-homologous receiver domain
CCZ27_12155	SM00327	von Willebrand factor (vWF) type A domain
CCZ27_12155	SM00609	Vault protein Inter-alpha-Trypsin domain
CCZ27_12160	SM00422	helix_turn_helix, mercury resistance
CCZ27_12175	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_12355	SM00052	Putative diguanylate phosphodiesterase
CCZ27_12355	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCZ27_12355	SM00091	PAS domain
CCZ27_12355	SM00267	diguanylate cyclase
CCZ27_12370	SM00073	Histidine Phosphotransfer domain
CCZ27_12370	SM00260	Two component signalling adaptor domain
CCZ27_12370	SM00387	Histidine kinase-like ATPases
CCZ27_12370	SM01231	CCZ27_12370
CCZ27_12380	SM00448	cheY-homologous receiver domain
CCZ27_12385	SM00260	Two component signalling adaptor domain
CCZ27_12385	SM00448	cheY-homologous receiver domain
CCZ27_12390	SM00260	Two component signalling adaptor domain
CCZ27_12390	SM00448	cheY-homologous receiver domain
CCZ27_12415	SM00267	diguanylate cyclase
CCZ27_12415	SM00448	cheY-homologous receiver domain
CCZ27_12445	SM00900	CCZ27_12445
CCZ27_12455	SM00478	endonuclease III
CCZ27_12455	SM00525	CCZ27_12455
CCZ27_12485	SM00382	ATPases associated with a variety of cellular activities
CCZ27_12500	SM00347	helix_turn_helix multiple antibiotic resistance protein
CCZ27_12545	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCZ27_12545	SM00091	PAS domain
CCZ27_12545	SM00267	diguanylate cyclase
CCZ27_12550	SM00867	YceI-like domain 
CCZ27_12555	SM00867	YceI-like domain 
CCZ27_12560	SM00387	Histidine kinase-like ATPases
CCZ27_12610	SM00327	von Willebrand factor (vWF) type A domain
CCZ27_12635	SM00671	Sel1-like repeats.
CCZ27_12660	SM00346	helix_turn_helix isocitrate lyase regulation
CCZ27_12675	SM00965	Secretin and TonB N terminus short domain
CCZ27_12700	SM00422	helix_turn_helix, mercury resistance
CCZ27_12710	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCZ27_12715	SM00100	Cyclic nucleotide-monophosphate binding domain
CCZ27_12715	SM00419	helix_turn_helix, cAMP Regulatory protein
CCZ27_12725	SM00100	Cyclic nucleotide-monophosphate binding domain
CCZ27_12725	SM00419	helix_turn_helix, cAMP Regulatory protein
CCZ27_12730	SM00450	Rhodanese Homology Domain
CCZ27_12740	SM00382	ATPases associated with a variety of cellular activities
CCZ27_12810	SM00062	Bacterial periplasmic substrate-binding proteins
CCZ27_12835	SM01007	Class II Aldolase and Adducin N-terminal domain
CCZ27_12845	SM00849	Metallo-beta-lactamase superfamily
CCZ27_12845	SM01027	Beta-Casp domain
CCZ27_12905	SM00822	CCZ27_12905
CCZ27_12965	SM00838	Elongation factor G C-terminus
CCZ27_12965	SM00889	Elongation factor G, domain IV
CCZ27_12995	SM01329	CCZ27_12995
CCZ27_13055	SM00357	Cold shock protein domain
CCZ27_13065	SM00382	ATPases associated with a variety of cellular activities
CCZ27_13065	SM01086	C-terminal, D2-small domain, of ClpB protein
CCZ27_13085	SM00448	cheY-homologous receiver domain
CCZ27_13085	SM00862	Transcriptional regulatory protein, C terminal
CCZ27_13090	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCZ27_13090	SM00387	Histidine kinase-like ATPases
CCZ27_13090	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_13125	SM00450	Rhodanese Homology Domain
CCZ27_13135	SM00363	S4 RNA-binding domain
CCZ27_13150	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CCZ27_13155	SM00382	ATPases associated with a variety of cellular activities
CCZ27_13235	SM00905	Dihydroneopterin aldolase
CCZ27_13285	SM00564	beta-propeller repeat
CCZ27_13295	SM00062	Bacterial periplasmic substrate-binding proteins
CCZ27_13310	SM00849	Metallo-beta-lactamase superfamily
CCZ27_13325	SM00849	Metallo-beta-lactamase superfamily
CCZ27_13330	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCZ27_13330	SM00091	PAS domain
CCZ27_13330	SM00267	diguanylate cyclase
CCZ27_13355	SM00382	ATPases associated with a variety of cellular activities
CCZ27_13360	SM00382	ATPases associated with a variety of cellular activities
CCZ27_13380	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCZ27_13380	SM00387	Histidine kinase-like ATPases
CCZ27_13385	SM00421	helix_turn_helix, Lux Regulon
CCZ27_13385	SM00448	cheY-homologous receiver domain
CCZ27_13390	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCZ27_13485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCZ27_13485	SM00387	Histidine kinase-like ATPases
CCZ27_13485	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_13495	SM00382	ATPases associated with a variety of cellular activities
CCZ27_13495	SM00448	cheY-homologous receiver domain
CCZ27_13505	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCZ27_13510	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CCZ27_13535	SM00880	CCZ27_13535
CCZ27_13535	SM01118	CCZ27_13535
CCZ27_13540	SM00855	Phosphoglycerate mutase family
CCZ27_13595	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CCZ27_13610	SM00382	ATPases associated with a variety of cellular activities
CCZ27_13650	SM00852	Probable molybdopterin binding domain
CCZ27_13665	SM00855	Phosphoglycerate mutase family
CCZ27_13695	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CCZ27_13695	SM00245	tail specific protease
CCZ27_13705	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCZ27_13710	SM00450	Rhodanese Homology Domain
CCZ27_13760	SM01004	Delta-aminolevulinic acid dehydratase
CCZ27_13780	SM00852	Probable molybdopterin binding domain
CCZ27_13800	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCZ27_13800	SM00091	PAS domain
CCZ27_13800	SM00267	diguanylate cyclase
CCZ27_13835	SM00861	Transketolase, pyrimidine binding domain
CCZ27_13840	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CCZ27_13850	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCZ27_13865	SM00382	ATPases associated with a variety of cellular activities
CCZ27_13880	SM00961	Ribulose bisphosphate carboxylase, small chain
CCZ27_13885	SM00382	ATPases associated with a variety of cellular activities
CCZ27_13900	SM00861	Transketolase, pyrimidine binding domain
CCZ27_13965	SM00419	helix_turn_helix, cAMP Regulatory protein
CCZ27_13980	SM00347	helix_turn_helix multiple antibiotic resistance protein
CCZ27_14020	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
CCZ27_14230	SM00382	ATPases associated with a variety of cellular activities
CCZ27_14265	SM00382	ATPases associated with a variety of cellular activities
CCZ27_14275	SM00382	ATPases associated with a variety of cellular activities
CCZ27_14275	SM00448	cheY-homologous receiver domain
CCZ27_14280	SM00387	Histidine kinase-like ATPases
CCZ27_14280	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_14300	SM01007	Class II Aldolase and Adducin N-terminal domain
CCZ27_14375	SM00671	Sel1-like repeats.
CCZ27_14380	SM00849	Metallo-beta-lactamase superfamily
CCZ27_14395	SM00382	ATPases associated with a variety of cellular activities
CCZ27_14410	SM00662	RNA polymerases D
CCZ27_14415	SM00363	S4 RNA-binding domain
CCZ27_14415	SM01390	CCZ27_14415
CCZ27_14435	SM00316	Ribosomal protein S1-like RNA-binding domain
CCZ27_14485	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CCZ27_14490	SM01374	CCZ27_14490
CCZ27_14510	SM00322	K homology RNA-binding domain
CCZ27_14525	SM01382	CCZ27_14525
CCZ27_14525	SM01383	CCZ27_14525
CCZ27_14545	SM01403	CCZ27_14545
CCZ27_14555	SM00838	Elongation factor G C-terminus
CCZ27_14555	SM00889	Elongation factor G, domain IV
CCZ27_14570	SM00663	RNA polymerase I subunit A N-terminus
CCZ27_14600	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CCZ27_14600	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CCZ27_14655	SM00421	helix_turn_helix, Lux Regulon
CCZ27_14655	SM00448	cheY-homologous receiver domain
CCZ27_14665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCZ27_14665	SM00387	Histidine kinase-like ATPases
CCZ27_14665	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_14665	SM00448	cheY-homologous receiver domain
CCZ27_14685	SM00382	ATPases associated with a variety of cellular activities
CCZ27_14705	SM00382	ATPases associated with a variety of cellular activities
CCZ27_14725	SM00382	ATPases associated with a variety of cellular activities
CCZ27_14755	SM00346	helix_turn_helix isocitrate lyase regulation
CCZ27_14775	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_14780	SM00091	PAS domain
CCZ27_14780	SM00387	Histidine kinase-like ATPases
CCZ27_14780	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_14780	SM00448	cheY-homologous receiver domain
CCZ27_14785	SM00448	cheY-homologous receiver domain
CCZ27_14785	SM00862	Transcriptional regulatory protein, C terminal
CCZ27_14800	SM00878	Biotin carboxylase C-terminal domain
CCZ27_14820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCZ27_14820	SM00895	CCZ27_14820
CCZ27_14825	SM01091	Transporter associated domain
CCZ27_14855	SM00382	ATPases associated with a variety of cellular activities
CCZ27_14910	SM00671	Sel1-like repeats.
CCZ27_14960	SM00052	Putative diguanylate phosphodiesterase
CCZ27_14960	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCZ27_14960	SM00091	PAS domain
CCZ27_14960	SM00267	diguanylate cyclase
CCZ27_14960	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCZ27_15010	SM00382	ATPases associated with a variety of cellular activities
CCZ27_15030	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CCZ27_15045	SM00382	ATPases associated with a variety of cellular activities
CCZ27_15085	SM00899	CCZ27_15085
CCZ27_15090	SM00899	CCZ27_15090
CCZ27_15155	SM00363	S4 RNA-binding domain
CCZ27_15155	SM01390	CCZ27_15155
CCZ27_15200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCZ27_15200	SM00387	Histidine kinase-like ATPases
CCZ27_15200	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_15205	SM00448	cheY-homologous receiver domain
CCZ27_15205	SM00862	Transcriptional regulatory protein, C terminal
CCZ27_15210	SM00382	ATPases associated with a variety of cellular activities
CCZ27_15255	SM00240	Forkhead associated domain
CCZ27_15260	SM01400	CCZ27_15260
CCZ27_15265	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CCZ27_15285	SM00831	Cation transporter/ATPase, N-terminus
CCZ27_15330	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCZ27_15340	SM00382	ATPases associated with a variety of cellular activities
CCZ27_15350	SM00062	Bacterial periplasmic substrate-binding proteins
CCZ27_15350	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CCZ27_15430	SM00860	SMI1 / KNR4 family
CCZ27_15485	SM00052	Putative diguanylate phosphodiesterase
CCZ27_15485	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CCZ27_15485	SM00267	diguanylate cyclase
CCZ27_15485	SM01079	CCZ27_15485
CCZ27_15515	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCZ27_15515	SM00895	CCZ27_15515
CCZ27_15530	SM00347	helix_turn_helix multiple antibiotic resistance protein
CCZ27_15545	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_15575	SM00893	Electron transfer flavoprotein domain
CCZ27_15580	SM00893	Electron transfer flavoprotein domain
CCZ27_15640	SM00881	CoA binding domain
CCZ27_15645	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCZ27_15645	SM00895	CCZ27_15645
CCZ27_15725	SM00052	Putative diguanylate phosphodiesterase
CCZ27_15725	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCZ27_15725	SM00091	PAS domain
CCZ27_15725	SM00267	diguanylate cyclase
CCZ27_15755	SM00226	Low molecular weight phosphatase family
CCZ27_15760	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCZ27_15765	SM01230	CCZ27_15765
CCZ27_15860	SM00382	ATPases associated with a variety of cellular activities
CCZ27_15880	SM00382	ATPases associated with a variety of cellular activities
CCZ27_16005	SM00903	Flavin reductase like domain
CCZ27_16090	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CCZ27_16105	SM00965	Secretin and TonB N terminus short domain
CCZ27_16125	SM00842	Cell division protein FtsA
CCZ27_16135	SM01219	CCZ27_16135
CCZ27_16170	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CCZ27_16190	SM00487	DEAD-like helicases superfamily
CCZ27_16190	SM00490	helicase superfamily c-terminal domain
CCZ27_16230	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_16290	SM00382	ATPases associated with a variety of cellular activities
CCZ27_16300	SM00028	Tetratricopeptide repeats
CCZ27_16300	SM00671	Sel1-like repeats.
CCZ27_16305	SM00062	Bacterial periplasmic substrate-binding proteins
CCZ27_16305	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CCZ27_16320	SM00382	ATPases associated with a variety of cellular activities
CCZ27_16325	SM00870	CCZ27_16325
CCZ27_16365	SM00363	S4 RNA-binding domain
CCZ27_16375	SM00244	prohibitin homologues
CCZ27_16385	SM00382	ATPases associated with a variety of cellular activities
CCZ27_16385	SM01086	C-terminal, D2-small domain, of ClpB protein
CCZ27_16475	SM00052	Putative diguanylate phosphodiesterase
CCZ27_16475	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CCZ27_16475	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCZ27_16475	SM00091	PAS domain
CCZ27_16475	SM00267	diguanylate cyclase
CCZ27_16475	SM00448	cheY-homologous receiver domain
CCZ27_16480	SM00448	cheY-homologous receiver domain
CCZ27_16485	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCZ27_16485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCZ27_16485	SM00387	Histidine kinase-like ATPases
CCZ27_16485	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_16495	SM00563	Phosphate acyltransferases
CCZ27_16495	SM00823	Phosphopantetheine attachment site
CCZ27_16525	SM00849	Metallo-beta-lactamase superfamily
CCZ27_16550	SM00878	Biotin carboxylase C-terminal domain
CCZ27_16620	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCZ27_16620	SM00091	PAS domain
CCZ27_16620	SM00421	helix_turn_helix, Lux Regulon
CCZ27_16670	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_16710	SM00947	Carbonic anhydrase
CCZ27_16720	SM00422	helix_turn_helix, mercury resistance
CCZ27_16725	SM00849	Metallo-beta-lactamase superfamily
CCZ27_16760	SM00836	DALR anticodon binding domain
CCZ27_16760	SM01016	Arginyl tRNA synthetase N terminal dom
CCZ27_16830	SM00382	ATPases associated with a variety of cellular activities
CCZ27_16840	SM00382	ATPases associated with a variety of cellular activities
CCZ27_16940	SM00240	Forkhead associated domain
CCZ27_16960	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CCZ27_16985	SM00382	ATPases associated with a variety of cellular activities
CCZ27_17085	SM00849	Metallo-beta-lactamase superfamily
CCZ27_17090	SM00346	helix_turn_helix isocitrate lyase regulation
CCZ27_17130	SM00988	UreE urease accessory protein, N-terminal domain
CCZ27_17170	SM00382	ATPases associated with a variety of cellular activities
CCZ27_17195	SM00382	ATPases associated with a variety of cellular activities
CCZ27_17285	SM01400	CCZ27_17285
CCZ27_17345	SM00357	Cold shock protein domain
CCZ27_17380	SM01018	B12 binding domain
CCZ27_17415	SM00382	ATPases associated with a variety of cellular activities
CCZ27_17420	SM00382	ATPases associated with a variety of cellular activities
CCZ27_17425	SM00382	ATPases associated with a variety of cellular activities
CCZ27_17440	SM00938	Nitrogen regulatory protein P-II
CCZ27_17465	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CCZ27_17470	SM00382	ATPases associated with a variety of cellular activities
CCZ27_17495	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CCZ27_17500	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CCZ27_17500	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CCZ27_17565	SM00052	Putative diguanylate phosphodiesterase
CCZ27_17605	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CCZ27_17630	SM00382	ATPases associated with a variety of cellular activities
CCZ27_17655	SM00382	ATPases associated with a variety of cellular activities
CCZ27_17665	SM00255	Toll - interleukin 1 - resistance
CCZ27_17690	SM00460	Transglutaminase/protease-like homologues
CCZ27_17700	SM00460	Transglutaminase/protease-like homologues
CCZ27_17780	SM00487	DEAD-like helicases superfamily
CCZ27_17780	SM00490	helicase superfamily c-terminal domain
CCZ27_17785	SM00411	bacterial (prokaryotic) histone like domain
CCZ27_17795	SM00382	ATPases associated with a variety of cellular activities
CCZ27_17800	SM00382	ATPases associated with a variety of cellular activities
CCZ27_17810	SM00882	Coenzyme A transferase
CCZ27_17825	SM00822	CCZ27_17825
CCZ27_17870	SM00382	ATPases associated with a variety of cellular activities
CCZ27_17885	SM00346	helix_turn_helix isocitrate lyase regulation
CCZ27_17955	SM00881	CoA binding domain
CCZ27_17960	SM00100	Cyclic nucleotide-monophosphate binding domain
CCZ27_17960	SM00419	helix_turn_helix, cAMP Regulatory protein
CCZ27_17985	SM00382	ATPases associated with a variety of cellular activities
CCZ27_17990	SM00382	ATPases associated with a variety of cellular activities
CCZ27_18010	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CCZ27_18015	SM00903	Flavin reductase like domain
CCZ27_18020	SM00478	endonuclease III
CCZ27_18020	SM00525	CCZ27_18020
CCZ27_18025	SM00464	Found in ATP-dependent protease La (LON)
CCZ27_18065	SM00849	Metallo-beta-lactamase superfamily
CCZ27_18070	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CCZ27_18080	SM00257	Lysin motif
CCZ27_18145	SM00100	Cyclic nucleotide-monophosphate binding domain
CCZ27_18150	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_18250	SM00382	ATPases associated with a variety of cellular activities
CCZ27_18255	SM00869	Autotransporter beta-domain
CCZ27_18260	SM00867	YceI-like domain 
CCZ27_18305	SM00382	ATPases associated with a variety of cellular activities
CCZ27_18310	SM00382	ATPases associated with a variety of cellular activities
CCZ27_18325	SM00882	Coenzyme A transferase
CCZ27_18330	SM00882	Coenzyme A transferase
CCZ27_18400	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_18420	SM00966	SpoVT / AbrB like domain 
CCZ27_18625	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCZ27_18635	SM00226	Low molecular weight phosphatase family
CCZ27_18655	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CCZ27_18655	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CCZ27_18655	SM00493	CCZ27_18655
CCZ27_18750	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCZ27_18785	SM00382	ATPases associated with a variety of cellular activities
CCZ27_18790	SM00382	ATPases associated with a variety of cellular activities
CCZ27_18795	SM00849	Metallo-beta-lactamase superfamily
CCZ27_18800	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCZ27_18835	SM00382	ATPases associated with a variety of cellular activities
CCZ27_18860	SM00382	ATPases associated with a variety of cellular activities
CCZ27_18880	SM00014	Acid phosphatase homologues
CCZ27_18890	SM00422	helix_turn_helix, mercury resistance
CCZ27_18895	SM00857	Resolvase, N terminal domain
CCZ27_18930	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCZ27_18960	SM00450	Rhodanese Homology Domain
CCZ27_18975	SM00966	SpoVT / AbrB like domain 
CCZ27_18990	SM01005	Alanine racemase, C-terminal domain
CCZ27_18995	SM00028	Tetratricopeptide repeats
CCZ27_19035	SM00382	ATPases associated with a variety of cellular activities
CCZ27_19065	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CCZ27_19080	SM00421	helix_turn_helix, Lux Regulon
CCZ27_19080	SM00448	cheY-homologous receiver domain
CCZ27_19085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCZ27_19085	SM00387	Histidine kinase-like ATPases
CCZ27_19090	SM00100	Cyclic nucleotide-monophosphate binding domain
CCZ27_19090	SM00419	helix_turn_helix, cAMP Regulatory protein
CCZ27_19095	SM00479	CCZ27_19095
CCZ27_19105	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CCZ27_19105	SM00954	Region found in RelA / SpoT proteins
CCZ27_19110	SM01409	CCZ27_19110
CCZ27_19115	SM00072	Guanylate kinase homologues.
CCZ27_19190	SM00387	Histidine kinase-like ATPases
CCZ27_19200	SM00448	cheY-homologous receiver domain
CCZ27_19200	SM00862	Transcriptional regulatory protein, C terminal
CCZ27_19210	SM00382	ATPases associated with a variety of cellular activities
CCZ27_19255	SM00327	von Willebrand factor (vWF) type A domain
CCZ27_19290	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CCZ27_19305	SM00903	Flavin reductase like domain
CCZ27_19375	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_19390	SM00797	Allophanate hydrolase subunit 2
CCZ27_19395	SM00796	Allophanate hydrolase subunit 1
CCZ27_19425	SM00966	SpoVT / AbrB like domain 
CCZ27_19430	SM01359	CCZ27_19430
CCZ27_19430	SM01360	CCZ27_19430
CCZ27_19565	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_19595	SM00382	ATPases associated with a variety of cellular activities
CCZ27_19605	SM00487	DEAD-like helicases superfamily
CCZ27_19605	SM00490	helicase superfamily c-terminal domain
CCZ27_19645	SM00382	ATPases associated with a variety of cellular activities
CCZ27_19710	SM00347	helix_turn_helix multiple antibiotic resistance protein
CCZ27_19730	SM00220	Serine/Threonine protein kinases, catalytic domain
CCZ27_19735	SM00331	Sigma factor PP2C-like phosphatases
CCZ27_19735	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CCZ27_19750	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCZ27_19760	SM00382	ATPases associated with a variety of cellular activities
CCZ27_19785	SM00052	Putative diguanylate phosphodiesterase
CCZ27_19785	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCZ27_19785	SM00091	PAS domain
CCZ27_19785	SM00267	diguanylate cyclase
CCZ27_19855	SM00947	Carbonic anhydrase
CCZ27_19860	SM00487	DEAD-like helicases superfamily
CCZ27_19860	SM00490	helicase superfamily c-terminal domain
CCZ27_19880	SM00448	cheY-homologous receiver domain
CCZ27_19885	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCZ27_19885	SM00387	Histidine kinase-like ATPases
CCZ27_19885	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_19930	SM00487	DEAD-like helicases superfamily
CCZ27_19960	SM00942	Primase C terminal 1 (PriCT-1)
CCZ27_19960	SM00943	Bifunctional DNA primase/polymerase, N-terminal
CCZ27_20010	SM01234	CCZ27_20010
CCZ27_20025	SM00382	ATPases associated with a variety of cellular activities
CCZ27_20025	SM00760	Bacterial dnaA protein helix-turn-helix domain
CCZ27_20030	SM00480	DNA polymerase III beta subunit
CCZ27_20085	SM00448	cheY-homologous receiver domain
CCZ27_20145	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_20165	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCZ27_20165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCZ27_20180	SM00382	ATPases associated with a variety of cellular activities
CCZ27_20200	SM00382	ATPases associated with a variety of cellular activities
CCZ27_20235	SM00903	Flavin reductase like domain
CCZ27_20250	SM00091	PAS domain
CCZ27_20250	SM00267	diguanylate cyclase
CCZ27_20270	SM00091	PAS domain
CCZ27_20300	SM00841	Elongation factor P, C-terminal
CCZ27_20300	SM01185	CCZ27_20300
CCZ27_20315	SM00382	ATPases associated with a variety of cellular activities
CCZ27_20330	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCZ27_20330	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCZ27_20335	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CCZ27_20355	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CCZ27_20355	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CCZ27_20355	SM00493	CCZ27_20355
CCZ27_20370	SM00257	Lysin motif
CCZ27_20390	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CCZ27_20470	SM00382	ATPases associated with a variety of cellular activities
CCZ27_20475	SM00382	ATPases associated with a variety of cellular activities
CCZ27_20585	SM00903	Flavin reductase like domain
CCZ27_20605	SM00382	ATPases associated with a variety of cellular activities
CCZ27_20610	SM00382	ATPases associated with a variety of cellular activities
CCZ27_20620	SM00347	helix_turn_helix multiple antibiotic resistance protein
CCZ27_20625	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_20660	SM00829	Enoylreductase
CCZ27_20675	SM00912	haemagglutination activity domain
CCZ27_20755	SM00450	Rhodanese Homology Domain
CCZ27_20760	SM00422	helix_turn_helix, mercury resistance
CCZ27_20830	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_20860	SM00966	SpoVT / AbrB like domain 
CCZ27_20870	SM00829	Enoylreductase
CCZ27_20885	SM00382	ATPases associated with a variety of cellular activities
CCZ27_20920	SM00890	Domain of unknown function
CCZ27_20930	SM00822	CCZ27_20930
CCZ27_20935	SM00342	helix_turn_helix, arabinose operon control protein
CCZ27_20940	SM00912	haemagglutination activity domain
CCZ27_20975	SM00769	Water Stress and Hypersensitive response
CCZ27_20985	SM00357	Cold shock protein domain
CCZ27_20990	SM00347	helix_turn_helix multiple antibiotic resistance protein
CCZ27_21000	SM00382	ATPases associated with a variety of cellular activities
CCZ27_21010	SM00917	LeuA allosteric (dimerisation) domain
CCZ27_21015	SM00344	helix_turn_helix ASNC type
CCZ27_21020	SM00382	ATPases associated with a variety of cellular activities
CCZ27_21025	SM00382	ATPases associated with a variety of cellular activities
CCZ27_21045	SM00382	ATPases associated with a variety of cellular activities
CCZ27_21055	SM00882	Coenzyme A transferase
CCZ27_21060	SM01228	CCZ27_21060
CCZ27_21085	SM00470	ParB-like nuclease domain
CCZ27_21095	SM00563	Phosphate acyltransferases
CCZ27_21105	SM00563	Phosphate acyltransferases
CCZ27_21110	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CCZ27_21150	SM00382	ATPases associated with a variety of cellular activities
CCZ27_21165	SM00978	CCZ27_21165
CCZ27_21180	SM00448	cheY-homologous receiver domain
CCZ27_21180	SM00862	Transcriptional regulatory protein, C terminal
CCZ27_21185	SM00387	Histidine kinase-like ATPases
CCZ27_21185	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_21205	SM00845	GatB domain
CCZ27_21255	SM00936	Penicillin-binding protein 5, C-terminal domain 
CCZ27_21275	SM00729	Elongator protein 3, MiaB family, Radical SAM
CCZ27_21350	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CCZ27_21355	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CCZ27_21380	SM00382	ATPases associated with a variety of cellular activities
CCZ27_21395	SM00347	helix_turn_helix multiple antibiotic resistance protein
CCZ27_21440	SM00052	Putative diguanylate phosphodiesterase
CCZ27_21440	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CCZ27_21440	SM00091	PAS domain
CCZ27_21440	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCZ27_21440	SM00267	diguanylate cyclase
CCZ27_21460	SM00421	helix_turn_helix, Lux Regulon
CCZ27_21460	SM00448	cheY-homologous receiver domain
CCZ27_21465	SM00448	cheY-homologous receiver domain
CCZ27_21470	SM00387	Histidine kinase-like ATPases
CCZ27_21475	SM00749	bacterial OsmY and nodulation domain
CCZ27_21540	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CCZ27_21610	SM00267	diguanylate cyclase
CCZ27_21610	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCZ27_21625	SM00382	ATPases associated with a variety of cellular activities
CCZ27_21630	SM00382	ATPases associated with a variety of cellular activities
CCZ27_21665	SM00978	CCZ27_21665
CCZ27_21720	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_21755	SM00267	diguanylate cyclase
CCZ27_21755	SM00448	cheY-homologous receiver domain
CCZ27_21765	SM00363	S4 RNA-binding domain
CCZ27_21770	SM00996	S-adenosyl-L-homocysteine hydrolase
CCZ27_21770	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CCZ27_21805	SM00419	helix_turn_helix, cAMP Regulatory protein
CCZ27_21815	SM00382	ATPases associated with a variety of cellular activities
CCZ27_21820	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CCZ27_21830	SM00316	Ribosomal protein S1-like RNA-binding domain
CCZ27_21870	SM00986	Uracil DNA glycosylase superfamily
CCZ27_21870	SM00987	UreE urease accessory protein, C-terminal domain 
CCZ27_21885	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CCZ27_21885	SM00474	3'-5' exonuclease
CCZ27_21885	SM00475	5'-3' exonuclease
CCZ27_21885	SM00482	DNA polymerase A domain
CCZ27_22020	SM00382	ATPases associated with a variety of cellular activities
CCZ27_22040	SM00855	Phosphoglycerate mutase family
CCZ27_22090	SM00382	ATPases associated with a variety of cellular activities
CCZ27_22125	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCZ27_22145	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCZ27_22155	SM00487	DEAD-like helicases superfamily
CCZ27_22155	SM00490	helicase superfamily c-terminal domain
CCZ27_22185	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CCZ27_22185	SM00267	diguanylate cyclase
CCZ27_22195	SM00052	Putative diguanylate phosphodiesterase
CCZ27_22195	SM00091	PAS domain
CCZ27_22195	SM00267	diguanylate cyclase
CCZ27_22195	SM00448	cheY-homologous receiver domain
CCZ27_22200	SM00387	Histidine kinase-like ATPases
CCZ27_22225	SM00052	Putative diguanylate phosphodiesterase
CCZ27_22225	SM00267	diguanylate cyclase
CCZ27_22225	SM01080	CCZ27_22225
CCZ27_22240	SM00981	CCZ27_22240
CCZ27_22250	SM00382	ATPases associated with a variety of cellular activities
CCZ27_22270	SM01152	CCZ27_22270
CCZ27_22290	SM00732	Likely ribonuclease with RNase H fold.
CCZ27_22305	SM00073	Histidine Phosphotransfer domain
CCZ27_22305	SM00260	Two component signalling adaptor domain
CCZ27_22305	SM00387	Histidine kinase-like ATPases
CCZ27_22305	SM00448	cheY-homologous receiver domain
CCZ27_22305	SM01231	CCZ27_22305
CCZ27_22310	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CCZ27_22320	SM00448	cheY-homologous receiver domain
CCZ27_22325	SM00448	cheY-homologous receiver domain
CCZ27_22350	SM00387	Histidine kinase-like ATPases
CCZ27_22355	SM00421	helix_turn_helix, Lux Regulon
CCZ27_22355	SM00448	cheY-homologous receiver domain
CCZ27_22365	SM00116	Domain in cystathionine beta-synthase and other proteins.
CCZ27_22365	SM00924	MgtE intracellular N domain
CCZ27_22380	SM00955	CCZ27_22380
CCZ27_22410	SM00382	ATPases associated with a variety of cellular activities
CCZ27_22410	SM00487	DEAD-like helicases superfamily
CCZ27_22410	SM00490	helicase superfamily c-terminal domain
CCZ27_22410	SM00847	Helicase associated domain (HA2)  Add an annotation
CCZ27_22440	SM00382	ATPases associated with a variety of cellular activities
CCZ27_22695	SM00267	diguanylate cyclase
CCZ27_22700	SM00267	diguanylate cyclase
CCZ27_22700	SM00448	cheY-homologous receiver domain
CCZ27_22725	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_22740	SM00028	Tetratricopeptide repeats
CCZ27_22760	SM00404	Protein tyrosine phosphatase, catalytic domain motif
CCZ27_22820	SM00528	Domain in histone-like proteins of HNS family
CCZ27_22830	SM00966	SpoVT / AbrB like domain 
CCZ27_22850	SM00966	SpoVT / AbrB like domain 
CCZ27_22860	SM00857	Resolvase, N terminal domain
CCZ27_22885	SM00938	Nitrogen regulatory protein P-II
CCZ27_22910	SM00448	cheY-homologous receiver domain
CCZ27_22910	SM00862	Transcriptional regulatory protein, C terminal
CCZ27_22915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CCZ27_22915	SM00387	Histidine kinase-like ATPases
CCZ27_22915	SM00388	His Kinase A (phosphoacceptor) domain
CCZ27_22930	SM00422	helix_turn_helix, mercury resistance
CCZ27_22955	SM00470	ParB-like nuclease domain
CCZ27_23005	SM00470	ParB-like nuclease domain
CCZ27_23010	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_23030	SM00382	ATPases associated with a variety of cellular activities
CCZ27_23085	SM00382	ATPases associated with a variety of cellular activities
CCZ27_23100	SM00530	Helix-turn-helix XRE-family like proteins 
CCZ27_23120	SM00479	CCZ27_23120
CCZ27_23125	SM00411	bacterial (prokaryotic) histone like domain
CCZ27_23170	SM00530	Helix-turn-helix XRE-family like proteins 
