locus-tag class description Tph_c00010 PF00308 Bacterial dnaA protein Tph_c00010 PF11638 DnaA N-terminal domain Tph_c00010 PF08299 Bacterial dnaA protein helix-turn-helix Tph_c00020 PF00712 DNA polymerase III beta subunit, N-terminal domain Tph_c00020 PF02768 DNA polymerase III beta subunit, C-terminal domain Tph_c00020 PF02767 DNA polymerase III beta subunit, central domain Tph_c00030 PF02463 RecF/RecN/SMC N terminal domain Tph_c00050 PF01751 Toprim domain Tph_c00050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tph_c00050 PF00986 DNA gyrase B subunit, carboxyl terminus Tph_c00050 PF00204 DNA gyrase B Tph_c00060 PF00690 Cation transporter/ATPase, N-terminus Tph_c00060 PF00689 Cation transporting ATPase, C-terminus Tph_c00080 PF00665 Integrase core domain Tph_c00130 PF00521 DNA gyrase/topoisomerase IV, subunit A Tph_c00130 PF03989 DNA gyrase C-terminal domain, beta-propeller Tph_c00140 PF01680 SOR/SNZ family Tph_c00150 PF01174 SNO glutamine amidotransferase family Tph_c00160 PF00266 Aminotransferase class-V Tph_c00170 PF01842 ACT domain Tph_c00170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tph_c00170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tph_c00180 PF02403 Seryl-tRNA synthetase N-terminal domain Tph_c00180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tph_c00260 PF00825 Ribonuclease P Tph_c00270 PF02096 60Kd inner membrane protein Tph_c00280 PF01424 R3H domain Tph_c00280 PF14804 Jag N-terminus Tph_c00290 PF12631 MnmE helical domain Tph_c00290 PF10396 GTP-binding protein TrmE N-terminus Tph_c00290 PF01926 50S ribosome-binding GTPase Tph_c00300 PF02527 rRNA small subunit methyltransferase G Tph_c00310 PF02195 ParB-like nuclease domain Tph_c00310 PF17762 HTH domain found in ParB protein Tph_c00330 PF13614 AAA domain Tph_c00340 PF17762 HTH domain found in ParB protein Tph_c00340 PF02195 ParB-like nuclease domain Tph_c00360 PF01969 Protein of unknown function DUF111 Tph_c00370 PF00731 AIR carboxylase Tph_c00390 PF01551 Peptidase family M23 Tph_c00390 PF04225 Opacity-associated protein A LysM-like domain Tph_c00410 PF03698 Uncharacterised protein family (UPF0180) Tph_c00420 PF06866 Protein of unknown function (DUF1256) Tph_c00430 PF03841 L-seryl-tRNA selenium transferase Tph_c00430 PF12390 Selenocysteine synthase N terminal Tph_c00440 PF09107 Elongation factor SelB, winged helix Tph_c00440 PF09105 Elongation factor SelB, winged helix Tph_c00440 PF09106 Elongation factor SelB, winged helix Tph_c00440 PF03144 Elongation factor Tu domain 2 Tph_c00440 PF00009 Elongation factor Tu GTP binding domain Tph_c00450 PF13458 Periplasmic binding protein Tph_c00460 PF02653 Branched-chain amino acid transport system / permease component Tph_c00470 PF02653 Branched-chain amino acid transport system / permease component Tph_c00470 PF11862 Domain of unknown function (DUF3382) Tph_c00480 PF00005 ABC transporter Tph_c00480 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tph_c00490 PF00005 ABC transporter Tph_c00500 PF00571 CBS domain Tph_c00520 PF14537 Cytochrome c3 Tph_c00520 PF00890 FAD binding domain Tph_c00530 PF02954 Bacterial regulatory protein, Fis family Tph_c00530 PF13426 PAS domain Tph_c00530 PF00158 Sigma-54 interaction domain Tph_c00540 PF17853 GGDEF-like domain Tph_c00540 PF13556 PucR C-terminal helix-turn-helix domain Tph_c00600 PF03699 Uncharacterised protein family (UPF0182) Tph_c00610 PF08141 Small acid-soluble spore protein H family Tph_c00630 PF00156 Phosphoribosyl transferase domain Tph_c00630 PF05139 Erythromycin esterase Tph_c00670 PF02769 AIR synthase related protein, C-terminal domain Tph_c00670 PF00586 AIR synthase related protein, N-terminal domain Tph_c00680 PF01206 Sulfurtransferase TusA Tph_c00700 PF01250 Ribosomal protein S6 Tph_c00710 PF00436 Single-strand binding protein family Tph_c00720 PF01084 Ribosomal protein S18 Tph_c00760 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Tph_c00770 PF01368 DHH family Tph_c00770 PF02272 DHHA1 domain Tph_c00780 PF01281 Ribosomal protein L9, N-terminal domain Tph_c00780 PF03948 Ribosomal protein L9, C-terminal domain Tph_c00790 PF00004 ATPase family associated with various cellular activities (AAA) Tph_c00790 PF05362 Lon protease (S16) C-terminal proteolytic domain Tph_c00800 PF00772 DnaB-like helicase N terminal domain Tph_c00800 PF03796 DnaB-like helicase C terminal domain Tph_c00850 PF18665 Tetracyclin repressor-like, C-terminal domain Tph_c00850 PF00440 Bacterial regulatory proteins, tetR family Tph_c00890 PF00709 Adenylosuccinate synthetase Tph_c00940 PF01520 N-acetylmuramoyl-L-alanine amidase Tph_c00940 PF05036 Sporulation related domain Tph_c01000 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Tph_c01040 PF01980 tRNA-methyltransferase O Tph_c01050 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tph_c01070 PF01032 FecCD transport family Tph_c01080 PF00005 ABC transporter Tph_c01110 PF17853 GGDEF-like domain Tph_c01110 PF13556 PucR C-terminal helix-turn-helix domain Tph_c01110 PF05651 Putative sugar diacid recognition Tph_c01120 PF01578 Cytochrome C assembly protein Tph_c01140 PF17853 GGDEF-like domain Tph_c01140 PF13556 PucR C-terminal helix-turn-helix domain Tph_c01160 PF14537 Cytochrome c3 Tph_c01160 PF00890 FAD binding domain Tph_c01170 PF14537 Cytochrome c3 Tph_c01170 PF00890 FAD binding domain Tph_c01180 PF14537 Cytochrome c3 Tph_c01180 PF00890 FAD binding domain Tph_c01200 PF00005 ABC transporter Tph_c01210 PF01497 Periplasmic binding protein Tph_c01230 PF06968 Biotin and Thiamin Synthesis associated domain Tph_c01230 PF04055 Radical SAM superfamily Tph_c01240 PF00384 Molybdopterin oxidoreductase Tph_c01240 PF01568 Molydopterin dinucleotide binding domain Tph_c01280 PF01568 Molydopterin dinucleotide binding domain Tph_c01280 PF00384 Molybdopterin oxidoreductase Tph_c01290 PF00037 4Fe-4S binding domain Tph_c01290 PF13247 4Fe-4S dicluster domain Tph_c01320 PF12706 Beta-lactamase superfamily domain Tph_c01340 PF13426 PAS domain Tph_c01340 PF02954 Bacterial regulatory protein, Fis family Tph_c01340 PF00158 Sigma-54 interaction domain Tph_c01430 PF00384 Molybdopterin oxidoreductase Tph_c01430 PF01568 Molydopterin dinucleotide binding domain Tph_c01440 PF13247 4Fe-4S dicluster domain Tph_c01450 PF07690 Major Facilitator Superfamily Tph_c01480 PF12804 MobA-like NTP transferase domain Tph_c01490 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Tph_c01500 PF03453 MoeA N-terminal region (domain I and II) Tph_c01500 PF03454 MoeA C-terminal region (domain IV) Tph_c01500 PF00994 Probable molybdopterin binding domain Tph_c01510 PF03453 MoeA N-terminal region (domain I and II) Tph_c01510 PF03454 MoeA C-terminal region (domain IV) Tph_c01510 PF00994 Probable molybdopterin binding domain Tph_c01560 PF00005 ABC transporter Tph_c01580 PF04055 Radical SAM superfamily Tph_c01580 PF06463 Molybdenum Cofactor Synthesis C Tph_c01610 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c01620 PF08402 TOBE domain Tph_c01620 PF00005 ABC transporter Tph_c01630 PF01967 MoaC family Tph_c01650 PF00994 Probable molybdopterin binding domain Tph_c01670 PF02634 FdhD/NarQ family Tph_c01700 PF13426 PAS domain Tph_c01700 PF02954 Bacterial regulatory protein, Fis family Tph_c01700 PF00158 Sigma-54 interaction domain Tph_c01710 PF01568 Molydopterin dinucleotide binding domain Tph_c01710 PF00384 Molybdopterin oxidoreductase Tph_c01720 PF12800 4Fe-4S binding domain Tph_c01720 PF13247 4Fe-4S dicluster domain Tph_c01740 PF02634 FdhD/NarQ family Tph_c01750 PF12804 MobA-like NTP transferase domain Tph_c01760 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Tph_c01770 PF03454 MoeA C-terminal region (domain IV) Tph_c01770 PF00994 Probable molybdopterin binding domain Tph_c01770 PF03453 MoeA N-terminal region (domain I and II) Tph_c01800 PF02310 B12 binding domain Tph_c01800 PF02607 B12 binding domain Tph_c01810 PF00809 Pterin binding enzyme Tph_c01860 PF13426 PAS domain Tph_c01860 PF00672 HAMP domain Tph_c01860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tph_c01860 PF00512 His Kinase A (phospho-acceptor) domain Tph_c01870 PF00072 Response regulator receiver domain Tph_c01870 PF00486 Transcriptional regulatory protein, C terminal Tph_c01880 PF10776 Protein of unknown function (DUF2600) Tph_c01890 PF00348 Polyprenyl synthetase Tph_c01900 PF01336 OB-fold nucleic acid binding domain Tph_c01900 PF01966 HD domain Tph_c01910 PF17853 GGDEF-like domain Tph_c01910 PF13556 PucR C-terminal helix-turn-helix domain Tph_c01910 PF07905 Purine catabolism regulatory protein-like family Tph_c01940 PF01850 PIN domain Tph_c01960 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Tph_c02000 PF03062 MBOAT, membrane-bound O-acyltransferase family Tph_c02100 PF02743 Cache domain Tph_c02100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tph_c02100 PF00672 HAMP domain Tph_c02230 PF05343 M42 glutamyl aminopeptidase Tph_c02240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Tph_c02250 PF00873 AcrB/AcrD/AcrF family Tph_c02260 PF00440 Bacterial regulatory proteins, tetR family Tph_c02290 PF00534 Glycosyl transferases group 1 Tph_c02290 PF13579 Glycosyl transferase 4-like domain Tph_c02310 PF00953 Glycosyl transferase family 4 Tph_c02380 PF12841 YvrJ protein family Tph_c02420 PF00512 His Kinase A (phospho-acceptor) domain Tph_c02420 PF16736 Single Cache-like Tph_c02420 PF00989 PAS fold Tph_c02420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tph_c02430 PF00072 Response regulator receiver domain Tph_c02430 PF00486 Transcriptional regulatory protein, C terminal Tph_c02450 PF01555 DNA methylase Tph_c02530 PF00270 DEAD/DEAH box helicase Tph_c02530 PF00271 Helicase conserved C-terminal domain Tph_c02640 PF02706 Chain length determinant protein Tph_c02640 PF13807 G-rich domain on putative tyrosine kinase Tph_c02650 PF13614 AAA domain Tph_c02670 PF00953 Glycosyl transferase family 4 Tph_c02680 PF02719 Polysaccharide biosynthesis protein Tph_c02690 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Tph_c02690 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Tph_c02690 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Tph_c02700 PF01370 NAD dependent epimerase/dehydratase family Tph_c02730 PF00534 Glycosyl transferases group 1 Tph_c02780 PF00534 Glycosyl transferases group 1 Tph_c02780 PF13439 Glycosyltransferase Family 4 Tph_c02810 PF00534 Glycosyl transferases group 1 Tph_c02810 PF13439 Glycosyltransferase Family 4 Tph_c02820 PF01966 HD domain Tph_c02930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tph_c02930 PF00672 HAMP domain Tph_c02930 PF12729 Four helix bundle sensory module for signal transduction Tph_c03090 PF00990 Diguanylate cyclase, GGDEF domain Tph_c03120 PF00700 Bacterial flagellin C-terminal helical region Tph_c03120 PF00669 Bacterial flagellin N-terminal helical region Tph_c03200 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system Tph_c03230 PF00005 ABC transporter Tph_c03240 PF02361 Cobalt transport protein Tph_c03290 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Tph_c03310 PF01554 MatE Tph_c03330 PF01966 HD domain Tph_c03340 PF00872 Transposase, Mutator family Tph_c03360 PF13195 Protein of unknown function (DUF4011) Tph_c03360 PF13087 AAA domain Tph_c03360 PF13086 AAA domain Tph_c03360 PF13195 Protein of unknown function (DUF4011) Tph_c03360 PF13087 AAA domain Tph_c03360 PF13086 AAA domain Tph_c03390 PF17863 AAA lid domain Tph_c03390 PF01078 Magnesium chelatase, subunit ChlI Tph_c03400 PF13519 von Willebrand factor type A domain Tph_c03400 PF17863 AAA lid domain Tph_c03400 PF07728 AAA domain (dynein-related subfamily) Tph_c03420 PF01032 FecCD transport family Tph_c03430 PF00005 ABC transporter Tph_c03440 PF02514 CobN/Magnesium Chelatase Tph_c03480 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Tph_c03490 PF00005 ABC transporter Tph_c03520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tph_c03530 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c03550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tph_c03550 PF00005 ABC transporter Tph_c03560 PF00005 ABC transporter Tph_c03560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tph_c03570 PF01209 ubiE/COQ5 methyltransferase family Tph_c03600 PF02310 B12 binding domain Tph_c03600 PF02607 B12 binding domain Tph_c03610 PF00809 Pterin binding enzyme Tph_c03610 PF02965 Vitamin B12 dependent methionine synthase, activation domain Tph_c03610 PF02574 Homocysteine S-methyltransferase Tph_c03610 PF02310 B12 binding domain Tph_c03610 PF02607 B12 binding domain Tph_c03620 PF02310 B12 binding domain Tph_c03620 PF02607 B12 binding domain Tph_c03630 PF01965 DJ-1/PfpI family Tph_c03630 PF12833 Helix-turn-helix domain Tph_c03640 PF16363 GDP-mannose 4,6 dehydratase Tph_c03660 PF03062 MBOAT, membrane-bound O-acyltransferase family Tph_c03690 PF17727 CtsR C-terminal dimerization domain Tph_c03690 PF05848 CtsR N-terminal HTH domain Tph_c03710 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain Tph_c03720 PF02861 Clp amino terminal domain, pathogenicity island component Tph_c03720 PF00004 ATPase family associated with various cellular activities (AAA) Tph_c03720 PF10431 C-terminal, D2-small domain, of ClpB protein Tph_c03720 PF17871 AAA lid domain Tph_c03720 PF07724 AAA domain (Cdc48 subfamily) Tph_c03740 PF00881 Nitroreductase family Tph_c03750 PF05681 Fumarate hydratase (Fumerase) Tph_c03780 PF00158 Sigma-54 interaction domain Tph_c03780 PF13426 PAS domain Tph_c03780 PF02954 Bacterial regulatory protein, Fis family Tph_c03790 PF04205 FMN-binding domain Tph_c03790 PF00890 FAD binding domain Tph_c03800 PF00072 Response regulator receiver domain Tph_c03810 PF18073 Rubredoxin metal binding domain Tph_c03820 PF10635 DisA bacterial checkpoint controller linker region Tph_c03820 PF02457 DisA bacterial checkpoint controller nucleotide-binding Tph_c03820 PF12826 Helix-hairpin-helix motif Tph_c03840 PF02559 CarD-like/TRCF domain Tph_c03860 PF02542 YgbB family Tph_c03860 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tph_c03880 PF02954 Bacterial regulatory protein, Fis family Tph_c03880 PF00989 PAS fold Tph_c03880 PF00158 Sigma-54 interaction domain Tph_c03920 PF01435 Peptidase family M48 Tph_c03940 PF01343 Peptidase family S49 Tph_c03960 PF01145 SPFH domain / Band 7 family Tph_c03980 PF12849 PBP superfamily domain Tph_c04000 PF00118 TCP-1/cpn60 chaperonin family Tph_c04010 PF00166 Chaperonin 10 Kd subunit Tph_c04020 PF01522 Polysaccharide deacetylase Tph_c04040 PF01554 MatE Tph_c04050 PF02310 B12 binding domain Tph_c04050 PF04055 Radical SAM superfamily Tph_c04050 PF13282 Domain of unknown function (DUF4070) Tph_c04100 PF11741 AMIN domain Tph_c04100 PF01520 N-acetylmuramoyl-L-alanine amidase Tph_c04110 PF01184 GPR1/FUN34/yaaH family Tph_c04120 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Tph_c04130 PF01177 Asp/Glu/Hydantoin racemase Tph_c04140 PF01138 3' exoribonuclease family, domain 1 Tph_c04140 PF03725 3' exoribonuclease family, domain 2 Tph_c04150 PF01725 Ham1 family Tph_c04170 PF13247 4Fe-4S dicluster domain Tph_c04180 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Tph_c04180 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Tph_c04210 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tph_c04210 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tph_c04210 PF00037 4Fe-4S binding domain Tph_c04220 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tph_c04220 PF00384 Molybdopterin oxidoreductase Tph_c04220 PF12838 4Fe-4S dicluster domain Tph_c04220 PF01568 Molydopterin dinucleotide binding domain Tph_c04220 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tph_c04230 PF00465 Iron-containing alcohol dehydrogenase Tph_c04250 PF01695 IstB-like ATP binding protein Tph_c04260 PF00465 Iron-containing alcohol dehydrogenase Tph_c04360 PF00005 ABC transporter Tph_c04430 PF00877 NlpC/P60 family Tph_c04430 PF08239 Bacterial SH3 domain Tph_c04430 PF01476 LysM domain Tph_c04440 PF00654 Voltage gated chloride channel Tph_c04450 PF13847 Methyltransferase domain Tph_c04460 PF01047 MarR family Tph_c04470 PF06253 Trimethylamine methyltransferase (MTTB) Tph_c04480 PF09370 Phosphoenolpyruvate hydrolase-like Tph_c04480 PF00158 Sigma-54 interaction domain Tph_c04480 PF02954 Bacterial regulatory protein, Fis family Tph_c04500 PF04029 2-phosphosulpholactate phosphatase Tph_c04510 PF09370 Phosphoenolpyruvate hydrolase-like Tph_c04520 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain Tph_c04520 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain Tph_c04550 PF02421 Ferrous iron transport protein B Tph_c04550 PF07670 Nucleoside recognition Tph_c04550 PF07664 Ferrous iron transport protein B C terminus Tph_c04550 PF17910 FeoB cytosolic helical domain Tph_c04560 PF07670 Nucleoside recognition Tph_c04560 PF02421 Ferrous iron transport protein B Tph_c04560 PF07664 Ferrous iron transport protein B C terminus Tph_c04600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tph_c04630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Tph_c04630 PF05697 Bacterial trigger factor protein (TF) Tph_c04630 PF05698 Bacterial trigger factor protein (TF) C-terminus Tph_c04640 PF00574 Clp protease Tph_c04650 PF07724 AAA domain (Cdc48 subfamily) Tph_c04650 PF06689 ClpX C4-type zinc finger Tph_c04650 PF10431 C-terminal, D2-small domain, of ClpB protein Tph_c04660 PF00004 ATPase family associated with various cellular activities (AAA) Tph_c04660 PF05362 Lon protease (S16) C-terminal proteolytic domain Tph_c04670 PF00004 ATPase family associated with various cellular activities (AAA) Tph_c04670 PF05362 Lon protease (S16) C-terminal proteolytic domain Tph_c04670 PF02190 ATP-dependent protease La (LON) substrate-binding domain Tph_c04690 PF00795 Carbon-nitrogen hydrolase Tph_c04740 PF01614 Bacterial transcriptional regulator Tph_c04740 PF09339 IclR helix-turn-helix domain Tph_c04750 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Tph_c04750 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Tph_c04760 PF00474 Sodium:solute symporter family Tph_c04780 PF00871 Acetokinase family Tph_c04790 PF01515 Phosphate acetyl/butaryl transferase Tph_c04820 PF02086 D12 class N6 adenine-specific DNA methyltransferase Tph_c04830 PF12849 PBP superfamily domain Tph_c04840 PF00486 Transcriptional regulatory protein, C terminal Tph_c04840 PF00072 Response regulator receiver domain Tph_c04850 PF00512 His Kinase A (phospho-acceptor) domain Tph_c04850 PF00989 PAS fold Tph_c04850 PF16736 Single Cache-like Tph_c04850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tph_c04860 PF00005 ABC transporter Tph_c04870 PF01895 PhoU domain Tph_c04880 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c04890 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c04910 PF08264 Anticodon-binding domain of tRNA Tph_c04910 PF10458 Valyl tRNA synthetase tRNA binding arm Tph_c04910 PF00133 tRNA synthetases class I (I, L, M and V) Tph_c04920 PF00132 Bacterial transferase hexapeptide (six repeats) Tph_c04920 PF06426 Serine acetyltransferase, N-terminal Tph_c04930 PF09190 DALR domain Tph_c04930 PF01406 tRNA synthetases class I (C) catalytic domain Tph_c04940 PF02511 Thymidylate synthase complementing protein Tph_c04950 PF08032 RNA 2'-O ribose methyltransferase substrate binding Tph_c04950 PF00588 SpoU rRNA Methylase family Tph_c04960 PF05991 YacP-like NYN domain Tph_c04970 PF08281 Sigma-70, region 4 Tph_c04970 PF04542 Sigma-70 region 2 Tph_c05040 PF01584 CheW-like domain Tph_c05050 PF00072 Response regulator receiver domain Tph_c05050 PF01339 CheB methylesterase Tph_c05070 PF01739 CheR methyltransferase, SAM binding domain Tph_c05070 PF03705 CheR methyltransferase, all-alpha domain Tph_c05080 PF00072 Response regulator receiver domain Tph_c05080 PF00486 Transcriptional regulatory protein, C terminal Tph_c05090 PF01584 CheW-like domain Tph_c05090 PF07194 P2 response regulator binding domain Tph_c05090 PF02895 Signal transducing histidine kinase, homodimeric domain Tph_c05090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tph_c05090 PF01627 Hpt domain Tph_c05110 PF00672 HAMP domain Tph_c05110 PF02743 Cache domain Tph_c05110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tph_c05120 PF00072 Response regulator receiver domain Tph_c05130 PF02743 Cache domain Tph_c05130 PF00672 HAMP domain Tph_c05130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tph_c05140 PF03186 CobD/Cbib protein Tph_c05150 PF00288 GHMP kinases N terminal domain Tph_c05160 PF00155 Aminotransferase class I and II Tph_c05180 PF01891 Cobalt uptake substrate-specific transmembrane region Tph_c05190 PF02553 Cobalt transport protein component CbiN Tph_c05210 PF00005 ABC transporter Tph_c05220 PF01888 CbiD Tph_c05230 PF05175 Methyltransferase small domain Tph_c05240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tph_c05250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tph_c05260 PF11760 Cobalamin synthesis G N-terminal Tph_c05260 PF11761 Cobalamin biosynthesis central region Tph_c05260 PF01890 Cobalamin synthesis G C-terminus Tph_c05270 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Tph_c05270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tph_c05280 PF02571 Precorrin-6x reductase CbiJ/CobK Tph_c05290 PF02570 Precorrin-8X methylmutase Tph_c05300 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tph_c05300 PF07685 CobB/CobQ-like glutamine amidotransferase domain Tph_c05310 PF03023 Lipid II flippase MurJ Tph_c05320 PF01950 Fructose-1,6-bisphosphatase Tph_c05330 PF00483 Nucleotidyl transferase Tph_c05340 PF13677 Membrane MotB of proton-channel complex MotA/MotB Tph_c05340 PF00691 OmpA family Tph_c05350 PF01618 MotA/TolQ/ExbB proton channel family Tph_c05390 PF04239 Protein of unknown function (DUF421) Tph_c05400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tph_c05400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tph_c05400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tph_c05400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tph_c05410 PF05384 Sensor protein DegS Tph_c05410 PF07730 Histidine kinase Tph_c05410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tph_c05420 PF00196 Bacterial regulatory proteins, luxR family Tph_c05420 PF00072 Response regulator receiver domain Tph_c05490 PF00196 Bacterial regulatory proteins, luxR family Tph_c05490 PF00072 Response regulator receiver domain Tph_c05500 PF00437 Type II/IV secretion system protein Tph_c05540 PF00271 Helicase conserved C-terminal domain Tph_c05540 PF04851 Type III restriction enzyme, res subunit Tph_c05590 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Tph_c05600 PF02277 Phosphoribosyltransferase Tph_c05610 PF00891 O-methyltransferase domain Tph_c05610 PF16864 Dimerisation domain Tph_c05630 PF00919 Uncharacterized protein family UPF0004 Tph_c05630 PF04055 Radical SAM superfamily Tph_c05630 PF01938 TRAM domain Tph_c05670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tph_c05670 PF00460 Flagella basal body rod protein Tph_c05700 PF02623 FliW protein Tph_c05710 PF02599 Global regulator protein family Tph_c05720 PF13247 4Fe-4S dicluster domain Tph_c05730 PF03063 Prismane/CO dehydrogenase family Tph_c05740 PF11967 Recombination protein O N terminal Tph_c05740 PF02565 Recombination protein O C terminal Tph_c05760 PF02091 Glycyl-tRNA synthetase alpha subunit Tph_c05770 PF05746 DALR anticodon binding domain Tph_c05770 PF02092 Glycyl-tRNA synthetase beta subunit Tph_c05780 PF08279 HTH domain Tph_c05780 PF00571 CBS domain Tph_c05790 PF03618 Kinase/pyrophosphorylase Tph_c05800 PF00391 PEP-utilising enzyme, mobile domain Tph_c05800 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Tph_c05800 PF02896 PEP-utilising enzyme, TIM barrel domain Tph_c05830 PF01966 HD domain Tph_c05830 PF13286 Phosphohydrolase-associated domain Tph_c05840 PF10410 DnaB-helicase binding domain of primase Tph_c05840 PF08275 DNA primase catalytic core, N-terminal domain Tph_c05840 PF01807 CHC2 zinc finger Tph_c05850 PF04545 Sigma-70, region 4 Tph_c05850 PF03979 Sigma-70 factor, region 1.1 Tph_c05850 PF04539 Sigma-70 region 3 Tph_c05850 PF04542 Sigma-70 region 2 Tph_c05850 PF00140 Sigma-70 factor, region 1.2 Tph_c05860 PF02607 B12 binding domain Tph_c05860 PF02310 B12 binding domain Tph_c05910 PF02811 PHP domain Tph_c05920 PF02875 Mur ligase family, glutamate ligase domain Tph_c05920 PF08245 Mur ligase middle domain Tph_c05930 PF06971 Putative DNA-binding protein N-terminus Tph_c05930 PF02629 CoA binding domain Tph_c05950 PF02545 Maf-like protein Tph_c05960 PF04002 RadC-like JAB domain Tph_c05980 PF04085 rod shape-determining protein MreC Tph_c06010 PF03775 Septum formation inhibitor MinC, C-terminal domain Tph_c06020 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tph_c06030 PF03776 Septum formation topological specificity factor MinE Tph_c06040 PF01098 Cell cycle protein Tph_c06080 PF10150 Ribonuclease E/G family Tph_c06080 PF00575 S1 RNA binding domain Tph_c06090 PF01979 Amidohydrolase family Tph_c06090 PF13382 Adenine deaminase C-terminal domain Tph_c06100 PF01555 DNA methylase Tph_c06130 PF01906 Putative heavy-metal-binding Tph_c06170 PF04542 Sigma-70 region 2 Tph_c06170 PF08281 Sigma-70, region 4 Tph_c06330 PF03050 Transposase IS66 family Tph_c06330 PF13817 IS66 C-terminal element Tph_c06330 PF13007 Transposase C of IS166 homeodomain Tph_c06330 PF13005 zinc-finger binding domain of transposase IS66 Tph_c06350 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal Tph_c06350 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Tph_c06360 PF00374 Nickel-dependent hydrogenase Tph_c06390 PF01520 N-acetylmuramoyl-L-alanine amidase Tph_c06400 PF02001 Protein of unknown function DUF134 Tph_c06440 PF02690 Na+/Pi-cotransporter Tph_c06450 PF00313 'Cold-shock' DNA-binding domain Tph_c06460 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Tph_c06460 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Tph_c06470 PF01043 SecA preprotein cross-linking domain Tph_c06470 PF07516 SecA Wing and Scaffold domain Tph_c06470 PF02810 SEC-C motif Tph_c06470 PF07517 SecA DEAD-like domain Tph_c06490 PF00472 RF-1 domain Tph_c06490 PF03462 PCRF domain Tph_c06500 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Tph_c06500 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Tph_c06510 PF00456 Transketolase, thiamine diphosphate binding domain Tph_c06520 PF02779 Transketolase, pyrimidine binding domain Tph_c06520 PF02780 Transketolase, C-terminal domain Tph_c06530 PF00005 ABC transporter Tph_c06540 PF02687 FtsX-like permease family Tph_c06540 PF18075 FtsX extracellular domain Tph_c06550 PF01551 Peptidase family M23 Tph_c06580 PF17820 PDZ domain Tph_c06580 PF01471 Putative peptidoglycan binding domain Tph_c06580 PF03572 Peptidase family S41 Tph_c06590 PF13180 PDZ domain Tph_c06610 PF01968 Hydantoinase/oxoprolinase Tph_c06610 PF05378 Hydantoinase/oxoprolinase N-terminal region Tph_c06630 PF00271 Helicase conserved C-terminal domain Tph_c06630 PF04851 Type III restriction enzyme, res subunit Tph_c06630 PF17757 UvrB interaction domain Tph_c06630 PF02151 UvrB/uvrC motif Tph_c06630 PF12344 Ultra-violet resistance protein B Tph_c06640 PF17755 UvrA DNA-binding domain Tph_c06640 PF17760 UvrA interaction domain Tph_c06650 PF01541 GIY-YIG catalytic domain Tph_c06650 PF12826 Helix-hairpin-helix motif Tph_c06650 PF02151 UvrB/uvrC motif Tph_c06650 PF08459 UvrC Helix-hairpin-helix N-terminal Tph_c06670 PF00342 Phosphoglucose isomerase Tph_c06680 PF00480 ROK family Tph_c06690 PF03668 P-loop ATPase protein family Tph_c06700 PF01933 Uncharacterised protein family UPF0052 Tph_c06710 PF02650 WhiA C-terminal HTH domain Tph_c06710 PF14527 WhiA LAGLIDADG-like domain Tph_c06710 PF10298 WhiA N-terminal LAGLIDADG-like domain Tph_c06730 PF00309 Sigma-54 factor, Activator interacting domain (AID) Tph_c06730 PF04963 Sigma-54 factor, core binding domain Tph_c06730 PF04552 Sigma-54, DNA binding domain Tph_c06740 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Tph_c06740 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Tph_c06750 PF00162 Phosphoglycerate kinase Tph_c06760 PF00121 Triosephosphate isomerase Tph_c06770 PF01676 Metalloenzyme superfamily Tph_c06770 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Tph_c06780 PF03952 Enolase, N-terminal domain Tph_c06780 PF00113 Enolase, C-terminal TIM barrel domain Tph_c06790 PF03840 Preprotein translocase SecG subunit Tph_c06800 PF06253 Trimethylamine methyltransferase (MTTB) Tph_c06810 PF06253 Trimethylamine methyltransferase (MTTB) Tph_c06820 PF02607 B12 binding domain Tph_c06820 PF02310 B12 binding domain Tph_c06870 PF00936 BMC domain Tph_c06900 PF10662 Ethanolamine utilisation - propanediol utilisation Tph_c06910 PF12282 Signal transduction histidine kinase Tph_c06910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tph_c06910 PF07568 Histidine kinase Tph_c06920 PF00072 Response regulator receiver domain Tph_c06920 PF03861 ANTAR domain Tph_c06930 PF06277 Ethanolamine utilisation protein EutA Tph_c06940 PF06751 Ethanolamine ammonia lyase large subunit (EutB) Tph_c06950 PF05985 Ethanolamine ammonia-lyase light chain (EutC) Tph_c06960 PF00936 BMC domain Tph_c06970 PF00171 Aldehyde dehydrogenase family Tph_c06970 PF00465 Iron-containing alcohol dehydrogenase Tph_c06980 PF00936 BMC domain Tph_c06990 PF01923 Cobalamin adenosyltransferase Tph_c07020 PF03319 Ethanolamine utilisation protein EutN/carboxysome Tph_c07030 PF10531 SLBB domain Tph_c07030 PF13375 RnfC Barrel sandwich hybrid domain Tph_c07030 PF13237 4Fe-4S dicluster domain Tph_c07030 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tph_c07040 PF00936 BMC domain Tph_c07060 PF00936 BMC domain Tph_c07070 PF04346 Ethanolamine utilisation protein, EutH Tph_c07130 PF01259 SAICAR synthetase Tph_c07140 PF17876 Cold shock domain Tph_c07140 PF08206 Ribonuclease B OB domain Tph_c07140 PF00575 S1 RNA binding domain Tph_c07140 PF00773 RNB domain Tph_c07150 PF01668 SmpB protein Tph_c07190 PF02086 D12 class N6 adenine-specific DNA methyltransferase Tph_c07250 PF04026 SpoVG Tph_c07290 PF06750 Bacterial Peptidase A24 N-terminal domain Tph_c07290 PF01478 Type IV leader peptidase family Tph_c07320 PF00437 Type II/IV secretion system protein Tph_c07390 PF00589 Phage integrase family Tph_c07410 PF02899 Phage integrase, N-terminal SAM-like domain Tph_c07410 PF00589 Phage integrase family Tph_c07480 PF17841 BID domain of Bartonella effector protein (Bep) Tph_c07480 PF02661 Fic/DOC family Tph_c07520 PF01551 Peptidase family M23 Tph_c07520 PF01476 LysM domain Tph_c07520 PF08525 Opacity-associated protein A N-terminal motif Tph_c07650 PF02915 Rubrerythrin Tph_c07660 PF01880 Desulfoferrodoxin Tph_c07700 PF01555 DNA methylase Tph_c07720 PF00665 Integrase core domain Tph_c07720 PF13333 Integrase core domain Tph_c07720 PF13276 HTH-like domain Tph_c07780 PF00990 Diguanylate cyclase, GGDEF domain Tph_c07780 PF08448 PAS fold Tph_c07850 PF00239 Resolvase, N terminal domain Tph_c07850 PF13408 Recombinase zinc beta ribbon domain Tph_c07850 PF07508 Recombinase Tph_c07960 PF00665 Integrase core domain Tph_c07980 PF01934 Protein of unknown function DUF86 Tph_c07990 PF01613 Flavin reductase like domain Tph_c07990 PF00301 Rubredoxin Tph_c08000 PF06397 Desulfoferrodoxin, N-terminal domain Tph_c08000 PF01880 Desulfoferrodoxin Tph_c08020 PF03030 Inorganic H+ pyrophosphatase Tph_c08030 PF02660 Glycerol-3-phosphate acyltransferase Tph_c08050 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tph_c08050 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tph_c08050 PF00037 4Fe-4S binding domain Tph_c08060 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tph_c08060 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tph_c08060 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Tph_c08080 PF13298 DNA polymerase Ligase (LigD) Tph_c08080 PF01068 ATP dependent DNA ligase domain Tph_c08080 PF04679 ATP dependent DNA ligase C terminal region Tph_c08100 PF05257 CHAP domain Tph_c08100 PF01476 LysM domain Tph_c08130 PF03816 Cell envelope-related transcriptional attenuator domain Tph_c08150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Tph_c08150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Tph_c08150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Tph_c08170 PF01464 Transglycosylase SLT domain Tph_c08180 PF00899 ThiF family Tph_c08190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tph_c08190 PF00512 His Kinase A (phospho-acceptor) domain Tph_c08190 PF00989 PAS fold Tph_c08200 PF00158 Sigma-54 interaction domain Tph_c08200 PF02954 Bacterial regulatory protein, Fis family Tph_c08200 PF00072 Response regulator receiver domain Tph_c08210 PF13247 4Fe-4S dicluster domain Tph_c08220 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Tph_c08220 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Tph_c08250 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tph_c08250 PF00037 4Fe-4S binding domain Tph_c08250 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tph_c08260 PF00037 4Fe-4S binding domain Tph_c08260 PF02906 Iron only hydrogenase large subunit, C-terminal domain Tph_c08260 PF02256 Iron hydrogenase small subunit Tph_c08260 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tph_c08270 PF00465 Iron-containing alcohol dehydrogenase Tph_c08280 PF01268 Formate--tetrahydrofolate ligase Tph_c08290 PF02540 NAD synthase Tph_c08310 PF00994 Probable molybdopterin binding domain Tph_c08310 PF03453 MoeA N-terminal region (domain I and II) Tph_c08310 PF03454 MoeA C-terminal region (domain IV) Tph_c08320 PF12728 Helix-turn-helix domain Tph_c08320 PF12727 PBP superfamily domain Tph_c08330 PF06463 Molybdenum Cofactor Synthesis C Tph_c08330 PF04055 Radical SAM superfamily Tph_c08340 PF01967 MoaC family Tph_c08360 PF00994 Probable molybdopterin binding domain Tph_c08370 PF00118 TCP-1/cpn60 chaperonin family Tph_c08390 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Tph_c08390 PF05221 S-adenosyl-L-homocysteine hydrolase Tph_c08410 PF00117 Glutamine amidotransferase class-I Tph_c08410 PF00958 GMP synthase C terminal domain Tph_c08420 PF00731 AIR carboxylase Tph_c08430 PF00206 Lyase Tph_c08430 PF10397 Adenylosuccinate lyase C-terminus Tph_c08440 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Tph_c08460 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Tph_c08460 PF02769 AIR synthase related protein, C-terminal domain Tph_c08460 PF00586 AIR synthase related protein, N-terminal domain Tph_c08470 PF00156 Phosphoribosyl transferase domain Tph_c08470 PF13537 Glutamine amidotransferase domain Tph_c08480 PF00586 AIR synthase related protein, N-terminal domain Tph_c08480 PF02769 AIR synthase related protein, C-terminal domain Tph_c08490 PF00551 Formyl transferase Tph_c08500 PF01808 AICARFT/IMPCHase bienzyme Tph_c08500 PF02142 MGS-like domain Tph_c08510 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Tph_c08510 PF02843 Phosphoribosylglycinamide synthetase, C domain Tph_c08510 PF02844 Phosphoribosylglycinamide synthetase, N domain Tph_c08540 PF08376 Nitrate and nitrite sensing Tph_c08540 PF03861 ANTAR domain Tph_c08550 PF00310 Glutamine amidotransferases class-II Tph_c08560 PF13187 4Fe-4S dicluster domain Tph_c08560 PF01645 Conserved region in glutamate synthase Tph_c08570 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Tph_c08570 PF13247 4Fe-4S dicluster domain Tph_c08570 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tph_c08600 PF07685 CobB/CobQ-like glutamine amidotransferase domain Tph_c08600 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tph_c08610 PF02540 NAD synthase Tph_c08610 PF00795 Carbon-nitrogen hydrolase Tph_c08620 PF03951 Glutamine synthetase, beta-Grasp domain Tph_c08620 PF00120 Glutamine synthetase, catalytic domain Tph_c08630 PF00733 Asparagine synthase Tph_c08630 PF13537 Glutamine amidotransferase domain Tph_c08650 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Tph_c08660 PF00543 Nitrogen regulatory protein P-II Tph_c08670 PF00543 Nitrogen regulatory protein P-II Tph_c08680 PF00148 Nitrogenase component 1 type Oxidoreductase Tph_c08710 PF04055 Radical SAM superfamily Tph_c08710 PF02579 Dinitrogenase iron-molybdenum cofactor Tph_c08720 PF00682 HMGL-like Tph_c08730 PF00005 ABC transporter Tph_c08730 PF08402 TOBE domain Tph_c08750 PF00909 Ammonium Transporter Family Tph_c08760 PF00543 Nitrogen regulatory protein P-II Tph_c08770 PF03323 Bacillus/Clostridium GerA spore germination protein Tph_c08780 PF03845 Spore germination protein Tph_c08790 PF05504 Spore germination B3/ GerAC like, C-terminal Tph_c08810 PF13393 Histidyl-tRNA synthetase Tph_c08820 PF01634 ATP phosphoribosyltransferase Tph_c08830 PF00815 Histidinol dehydrogenase Tph_c08840 PF00475 Imidazoleglycerol-phosphate dehydratase Tph_c08850 PF00117 Glutamine amidotransferase class-I Tph_c08860 PF00977 Histidine biosynthesis protein Tph_c08870 PF00977 Histidine biosynthesis protein Tph_c08880 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Tph_c08880 PF01502 Phosphoribosyl-AMP cyclohydrolase Tph_c08890 PF13361 UvrD-like helicase C-terminal domain Tph_c08890 PF00580 UvrD/REP helicase N-terminal domain Tph_c08910 PF01653 NAD-dependent DNA ligase adenylation domain Tph_c08910 PF00533 BRCA1 C Terminus (BRCT) domain Tph_c08910 PF03120 NAD-dependent DNA ligase OB-fold domain Tph_c08910 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Tph_c08910 PF12826 Helix-hairpin-helix motif Tph_c08930 PF00571 CBS domain Tph_c08930 PF00478 IMP dehydrogenase / GMP reductase domain Tph_c08940 PF00072 Response regulator receiver domain Tph_c08960 PF02686 Glu-tRNAGln amidotransferase C subunit Tph_c08970 PF01425 Amidase Tph_c08980 PF02934 GatB/GatE catalytic domain Tph_c08980 PF02637 GatB domain Tph_c09000 PF00682 HMGL-like Tph_c09010 PF00330 Aconitase family (aconitate hydratase) Tph_c09020 PF00694 Aconitase C-terminal domain Tph_c09030 PF18324 Hypothetical protein TT1725 Tph_c09030 PF00180 Isocitrate/isopropylmalate dehydrogenase Tph_c09040 PF05504 Spore germination B3/ GerAC like, C-terminal Tph_c09050 PF03845 Spore germination protein Tph_c09060 PF03323 Bacillus/Clostridium GerA spore germination protein Tph_c09080 PF00534 Glycosyl transferases group 1 Tph_c09080 PF13439 Glycosyltransferase Family 4 Tph_c09090 PF00483 Nucleotidyl transferase Tph_c09100 PF01208 Uroporphyrinogen decarboxylase (URO-D) Tph_c09120 PF02607 B12 binding domain Tph_c09120 PF02310 B12 binding domain Tph_c09130 PF03063 Prismane/CO dehydrogenase family Tph_c09140 PF02082 Transcriptional regulator Tph_c09150 PF03065 Glycosyl hydrolase family 57 Tph_c09150 PF09210 Domain of unknown function (DUF1957) Tph_c09180 PF01300 Telomere recombination Tph_c09180 PF07503 HypF finger Tph_c09180 PF17788 HypF Kae1-like domain Tph_c09180 PF00708 Acylphosphatase Tph_c09190 PF01455 HupF/HypC family Tph_c09200 PF01924 Hydrogenase formation hypA family Tph_c09210 PF02769 AIR synthase related protein, C-terminal domain Tph_c09210 PF00586 AIR synthase related protein, N-terminal domain Tph_c09230 PF01979 Amidohydrolase family Tph_c09270 PF02463 RecF/RecN/SMC N terminal domain Tph_c09300 PF02673 Bacitracin resistance protein BacA Tph_c09310 PF06782 Uncharacterised protein family (UPF0236) Tph_c09340 PF07733 Bacterial DNA polymerase III alpha NTPase domain Tph_c09340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Tph_c09340 PF14579 Helix-hairpin-helix motif Tph_c09340 PF01336 OB-fold nucleic acid binding domain Tph_c09340 PF02811 PHP domain Tph_c09350 PF02081 Tryptophan RNA-binding attenuator protein Tph_c09380 PF00365 Phosphofructokinase Tph_c09390 PF02887 Pyruvate kinase, alpha/beta domain Tph_c09390 PF00391 PEP-utilising enzyme, mobile domain Tph_c09390 PF00224 Pyruvate kinase, barrel domain Tph_c09400 PF00005 ABC transporter Tph_c09410 PF01458 Uncharacterized protein family (UPF0051) Tph_c09470 PF13190 PDGLE domain Tph_c09470 PF01891 Cobalt uptake substrate-specific transmembrane region Tph_c09490 PF00266 Aminotransferase class-V Tph_c09500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tph_c09500 PF03466 LysR substrate binding domain Tph_c09510 PF18152 DAHP synthase ferredoxin-like domain Tph_c09510 PF00793 DAHP synthetase I family Tph_c09520 PF02153 Prephenate dehydrogenase Tph_c09520 PF01842 ACT domain Tph_c09560 PF12627 Probable RNA and SrmB- binding site of polymerase A Tph_c09560 PF13735 tRNA nucleotidyltransferase domain 2 putative Tph_c09560 PF01743 Poly A polymerase head domain Tph_c09570 PF12146 Serine aminopeptidase, S33 Tph_c09600 PF01228 Glycine radical Tph_c09600 PF02901 Pyruvate formate lyase-like Tph_c09610 PF04055 Radical SAM superfamily Tph_c09680 PF03951 Glutamine synthetase, beta-Grasp domain Tph_c09680 PF00120 Glutamine synthetase, catalytic domain Tph_c09690 PF00672 HAMP domain Tph_c09690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tph_c09690 PF17202 Single cache domain 3 Tph_c09770 PF06133 Control of competence regulator ComK, YlbF/YmcA Tph_c09780 PF02361 Cobalt transport protein Tph_c09790 PF00005 ABC transporter Tph_c09810 PF17284 Spermidine synthase tetramerisation domain Tph_c09820 PF00491 Arginase family Tph_c09960 PF03780 Asp23 family, cell envelope-related function Tph_c09970 PF13684 Dihydroxyacetone kinase family Tph_c09970 PF02734 DAK2 domain Tph_c09980 PF17191 RecG wedge domain Tph_c09980 PF00271 Helicase conserved C-terminal domain Tph_c09980 PF00270 DEAD/DEAH box helicase Tph_c09990 PF00269 Small, acid-soluble spore proteins, alpha/beta type Tph_c10000 PF00269 Small, acid-soluble spore proteins, alpha/beta type Tph_c10010 PF03418 Germination protease Tph_c10020 PF03167 Uracil DNA glycosylase superfamily Tph_c10030 PF06782 Uncharacterised protein family (UPF0236) Tph_c10050 PF01467 Cytidylyltransferase-like Tph_c10070 PF07670 Nucleoside recognition Tph_c10080 PF01515 Phosphate acetyl/butaryl transferase Tph_c10090 PF00871 Acetokinase family Tph_c10110 PF01783 Ribosomal L32p protein family Tph_c10120 PF02504 Fatty acid synthesis protein Tph_c10130 PF00550 Phosphopantetheine attachment site Tph_c10140 PF14622 Ribonuclease-III-like Tph_c10140 PF00035 Double-stranded RNA binding motif Tph_c10150 PF04232 Stage V sporulation protein S (SpoVS) Tph_c10160 PF06470 SMC proteins Flexible Hinge Domain Tph_c10160 PF02463 RecF/RecN/SMC N terminal domain Tph_c10170 PF02881 SRP54-type protein, helical bundle domain Tph_c10170 PF00448 SRP54-type protein, GTPase domain Tph_c10180 PF01048 Phosphorylase superfamily Tph_c10190 PF01008 Initiation factor 2 subunit family Tph_c10200 PF00596 Class II Aldolase and Adducin N-terminal domain Tph_c10210 PF01979 Amidohydrolase family Tph_c10220 PF02978 Signal peptide binding domain Tph_c10220 PF00448 SRP54-type protein, GTPase domain Tph_c10220 PF02881 SRP54-type protein, helical bundle domain Tph_c10230 PF00886 Ribosomal protein S16 Tph_c10250 PF05239 PRC-barrel domain Tph_c10250 PF01782 RimM N-terminal domain Tph_c10260 PF01746 tRNA (Guanine-1)-methyltransferase Tph_c10270 PF01245 Ribosomal protein L19 Tph_c10280 PF10502 Signal peptidase, peptidase S26 Tph_c10290 PF01926 50S ribosome-binding GTPase Tph_c10300 PF01351 Ribonuclease HII Tph_c10320 PF01312 FlhB HrpN YscU SpaS Family Tph_c10330 PF01966 HD domain Tph_c10330 PF00072 Response regulator receiver domain Tph_c10340 PF02021 Uncharacterised protein family UPF0102 Tph_c10350 PF01565 FAD binding domain Tph_c10350 PF02913 FAD linked oxidases, C-terminal domain Tph_c10360 PF02754 Cysteine-rich domain Tph_c10400 PF01078 Magnesium chelatase, subunit ChlI Tph_c10400 PF13335 Magnesium chelatase, subunit ChlI C-terminal Tph_c10450 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Tph_c10520 PF00741 Gas vesicle protein Tph_c10530 PF05121 Gas vesicle protein K Tph_c10530 PF00741 Gas vesicle protein Tph_c10540 PF00741 Gas vesicle protein Tph_c10560 PF07728 AAA domain (dynein-related subfamily) Tph_c10590 PF00004 ATPase family associated with various cellular activities (AAA) Tph_c10590 PF06480 FtsH Extracellular Tph_c10590 PF01434 Peptidase family M41 Tph_c10590 PF17862 AAA+ lid domain Tph_c10610 PF00741 Gas vesicle protein Tph_c10640 PF00741 Gas vesicle protein Tph_c10670 PF00392 Bacterial regulatory proteins, gntR family Tph_c10680 PF00005 ABC transporter Tph_c10700 PF02735 Ku70/Ku80 beta-barrel domain Tph_c10710 PF17782 DprA winged helix domain Tph_c10710 PF02481 DNA recombination-mediator protein A Tph_c10720 PF01396 Topoisomerase DNA binding C4 zinc finger Tph_c10720 PF01131 DNA topoisomerase Tph_c10720 PF01751 Toprim domain Tph_c10730 PF01134 Glucose inhibited division protein A Tph_c10740 PF02899 Phage integrase, N-terminal SAM-like domain Tph_c10740 PF00589 Phage integrase family Tph_c10750 PF00227 Proteasome subunit Tph_c10760 PF00004 ATPase family associated with various cellular activities (AAA) Tph_c10760 PF07724 AAA domain (Cdc48 subfamily) Tph_c10760 PF10431 C-terminal, D2-small domain, of ClpB protein Tph_c10770 PF08222 CodY helix-turn-helix domain Tph_c10770 PF06018 CodY GAF-like domain Tph_c10790 PF00460 Flagella basal body rod protein Tph_c10800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tph_c10800 PF00460 Flagella basal body rod protein Tph_c10810 PF02049 Flagellar hook-basal body complex protein FliE Tph_c10820 PF08345 Flagellar M-ring protein C-terminal Tph_c10820 PF01514 Secretory protein of YscJ/FliF family Tph_c10830 PF01706 FliG C-terminal domain Tph_c10830 PF14841 FliG middle domain Tph_c10830 PF14842 FliG N-terminal domain Tph_c10850 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tph_c10850 PF18269 T3SS EscN ATPase C-terminal domain Tph_c10850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tph_c10890 PF03963 Flagellar hook capping protein - N-terminal region Tph_c10910 PF00460 Flagella basal body rod protein Tph_c10910 PF07559 Flagellar basal body protein FlaE Tph_c10910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tph_c10940 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Tph_c10940 PF02154 Flagellar motor switch protein FliM Tph_c10950 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Tph_c10950 PF04509 CheC-like family Tph_c10960 PF00072 Response regulator receiver domain Tph_c10980 PF00813 FliP family Tph_c10990 PF01313 Bacterial export proteins, family 3 Tph_c11000 PF01311 Bacterial export proteins, family 1 Tph_c11010 PF01312 FlhB HrpN YscU SpaS Family Tph_c11020 PF00771 FHIPEP family Tph_c11030 PF00448 SRP54-type protein, GTPase domain Tph_c11040 PF10609 NUBPL iron-transfer P-loop NTPase Tph_c11060 PF01339 CheB methylesterase Tph_c11060 PF00072 Response regulator receiver domain Tph_c11070 PF07194 P2 response regulator binding domain Tph_c11070 PF01627 Hpt domain Tph_c11070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tph_c11070 PF02895 Signal transducing histidine kinase, homodimeric domain Tph_c11070 PF01584 CheW-like domain Tph_c11080 PF04509 CheC-like family Tph_c11090 PF03975 CheD chemotactic sensory transduction Tph_c11100 PF04542 Sigma-70 region 2 Tph_c11100 PF04539 Sigma-70 region 3 Tph_c11100 PF04545 Sigma-70, region 4 Tph_c11140 PF00318 Ribosomal protein S2 Tph_c11150 PF00889 Elongation factor TS Tph_c11160 PF00696 Amino acid kinase family Tph_c11170 PF01765 Ribosome recycling factor Tph_c11200 PF01255 Putative undecaprenyl diphosphate synthase Tph_c11220 PF01594 AI-2E family transporter Tph_c11230 PF13288 DXP reductoisomerase C-terminal domain Tph_c11230 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Tph_c11230 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Tph_c11240 PF17820 PDZ domain Tph_c11240 PF02163 Peptidase family M50 Tph_c11250 PF04551 GcpE protein Tph_c11260 PF04073 Aminoacyl-tRNA editing domain Tph_c11260 PF03129 Anticodon binding domain Tph_c11260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tph_c11270 PF02576 RimP N-terminal domain Tph_c11270 PF17384 RimP C-terminal SH3 domain Tph_c11280 PF00575 S1 RNA binding domain Tph_c11280 PF08529 NusA N-terminal domain Tph_c11280 PF13184 NusA-like KH domain Tph_c11290 PF04296 Protein of unknown function (DUF448) Tph_c11310 PF00009 Elongation factor Tu GTP binding domain Tph_c11310 PF04760 Translation initiation factor IF-2, N-terminal region Tph_c11310 PF11987 Translation-initiation factor 2 Tph_c11310 PF00009 Elongation factor Tu GTP binding domain Tph_c11310 PF04760 Translation initiation factor IF-2, N-terminal region Tph_c11310 PF11987 Translation-initiation factor 2 Tph_c11320 PF02033 Ribosome-binding factor A Tph_c11330 PF01368 DHH family Tph_c11330 PF02272 DHHA1 domain Tph_c11340 PF16198 tRNA pseudouridylate synthase B C-terminal domain Tph_c11340 PF01509 TruB family pseudouridylate synthase (N terminal domain) Tph_c11350 PF01687 Riboflavin kinase Tph_c11350 PF06574 FAD synthetase Tph_c11360 PF00312 Ribosomal protein S15 Tph_c11370 PF00575 S1 RNA binding domain Tph_c11370 PF03725 3' exoribonuclease family, domain 2 Tph_c11370 PF00013 KH domain Tph_c11370 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Tph_c11370 PF01138 3' exoribonuclease family, domain 1 Tph_c11380 PF01522 Polysaccharide deacetylase Tph_c11400 PF05193 Peptidase M16 inactive domain Tph_c11400 PF00675 Insulinase (Peptidase family M16) Tph_c11410 PF05239 PRC-barrel domain Tph_c11420 PF05173 Dihydrodipicolinate reductase, C-terminus Tph_c11420 PF01113 Dihydrodipicolinate reductase, N-terminus Tph_c11430 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Tph_c11430 PF16924 Dipicolinate synthase subunit A N-terminal domain Tph_c11440 PF02441 Flavoprotein Tph_c11450 PF02774 Semialdehyde dehydrogenase, dimerisation domain Tph_c11450 PF01118 Semialdehyde dehydrogenase, NAD binding domain Tph_c11460 PF00701 Dihydrodipicolinate synthetase family Tph_c11470 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Tph_c11470 PF00753 Metallo-beta-lactamase superfamily Tph_c11470 PF17770 Ribonuclease J C-terminal domain Tph_c11490 PF00574 Clp protease Tph_c11500 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Tph_c11500 PF09397 Ftsk gamma domain Tph_c11500 PF17854 FtsK alpha domain Tph_c11500 PF01580 FtsK/SpoIIIE family Tph_c11510 PF00294 pfkB family carbohydrate kinase Tph_c11520 PF13464 Domain of unknown function (DUF4115) Tph_c11530 PF00919 Uncharacterized protein family UPF0004 Tph_c11530 PF18693 TRAM domain Tph_c11530 PF04055 Radical SAM superfamily Tph_c11550 PF01434 Peptidase family M41 Tph_c11550 PF17862 AAA+ lid domain Tph_c11550 PF00004 ATPase family associated with various cellular activities (AAA) Tph_c11560 PF02464 Competence-damaged protein Tph_c11560 PF18146 Damage-inducible protein CinA KH domain Tph_c11560 PF00994 Probable molybdopterin binding domain Tph_c11580 PF00154 recA bacterial DNA recombination protein Tph_c11590 PF12072 Domain of unknown function (DUF3552) Tph_c11590 PF01966 HD domain Tph_c11590 PF00013 KH domain Tph_c11610 PF13277 YmdB-like protein Tph_c11620 PF04232 Stage V sporulation protein S (SpoVS) Tph_c11630 PF01244 Membrane dipeptidase (Peptidase family M19) Tph_c11650 PF00877 NlpC/P60 family Tph_c11680 PF13649 Methyltransferase domain Tph_c11690 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Tph_c11700 PF02654 Cobalamin-5-phosphate synthase Tph_c11710 PF00300 Histidine phosphatase superfamily (branch 1) Tph_c11720 PF00571 CBS domain Tph_c11720 PF00478 IMP dehydrogenase / GMP reductase domain Tph_c11730 PF10431 C-terminal, D2-small domain, of ClpB protein Tph_c11730 PF02861 Clp amino terminal domain, pathogenicity island component Tph_c11730 PF17871 AAA lid domain Tph_c11730 PF07724 AAA domain (Cdc48 subfamily) Tph_c11730 PF00004 ATPase family associated with various cellular activities (AAA) Tph_c11750 PF02308 MgtC family Tph_c11760 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Tph_c11790 PF00534 Glycosyl transferases group 1 Tph_c11790 PF08323 Starch synthase catalytic domain Tph_c11800 PF00912 Transglycosylase Tph_c11800 PF00905 Penicillin binding protein transpeptidase domain Tph_c11850 PF01726 LexA DNA binding domain Tph_c11850 PF00717 Peptidase S24-like Tph_c12040 PF00176 SNF2 family N-terminal domain Tph_c12040 PF00271 Helicase conserved C-terminal domain Tph_c12210 PF13614 AAA domain Tph_c12240 PF02371 Transposase IS116/IS110/IS902 family Tph_c12240 PF01548 Transposase Tph_c12270 PF00005 ABC transporter Tph_c12280 PF07690 Major Facilitator Superfamily Tph_c12300 PF01330 RuvA N terminal domain Tph_c12300 PF07499 RuvA, C-terminal domain Tph_c12310 PF17864 RuvB AAA lid domain Tph_c12310 PF05491 RuvB C-terminal winged helix domain Tph_c12310 PF05496 Holliday junction DNA helicase RuvB P-loop domain Tph_c12320 PF02677 Epoxyqueuosine reductase QueH Tph_c12330 PF11146 Protein of unknown function (DUF2905) Tph_c12350 PF04122 Putative cell wall binding repeat 2 Tph_c12350 PF08486 Stage II sporulation protein Tph_c12360 PF02547 Queuosine biosynthesis protein Tph_c12370 PF01702 Queuine tRNA-ribosyltransferase Tph_c12390 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Tph_c12410 PF07549 SecD/SecF GG Motif Tph_c12410 PF02355 Protein export membrane protein Tph_c12420 PF07549 SecD/SecF GG Motif Tph_c12420 PF02355 Protein export membrane protein Tph_c12430 PF02277 Phosphoribosyltransferase Tph_c12440 PF01545 Cation efflux family Tph_c12440 PF16916 Dimerisation domain of Zinc Transporter Tph_c12460 PF13291 ACT domain Tph_c12460 PF04607 Region found in RelA / SpoT proteins Tph_c12460 PF02824 TGS domain Tph_c12470 PF02580 D-Tyr-tRNA(Tyr) deacylase Tph_c12480 PF00753 Metallo-beta-lactamase superfamily Tph_c12490 PF03129 Anticodon binding domain Tph_c12490 PF13393 Histidyl-tRNA synthetase Tph_c12500 PF01336 OB-fold nucleic acid binding domain Tph_c12500 PF00152 tRNA synthetases class II (D, K and N) Tph_c12500 PF02938 GAD domain Tph_c12510 PF00501 AMP-binding enzyme Tph_c12510 PF14535 AMP-binding enzyme C-terminal domain Tph_c12530 PF04389 Peptidase family M28 Tph_c12550 PF02381 MraZ protein, putative antitoxin-like Tph_c12560 PF01795 MraW methylase family Tph_c12580 PF03717 Penicillin-binding Protein dimerisation domain Tph_c12580 PF03793 PASTA domain Tph_c12580 PF00905 Penicillin binding protein transpeptidase domain Tph_c12590 PF01225 Mur ligase family, catalytic domain Tph_c12590 PF02875 Mur ligase family, glutamate ligase domain Tph_c12590 PF08245 Mur ligase middle domain Tph_c12600 PF01225 Mur ligase family, catalytic domain Tph_c12600 PF02875 Mur ligase family, glutamate ligase domain Tph_c12600 PF08245 Mur ligase middle domain Tph_c12610 PF00953 Glycosyl transferase family 4 Tph_c12610 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Tph_c12620 PF02875 Mur ligase family, glutamate ligase domain Tph_c12620 PF08245 Mur ligase middle domain Tph_c12630 PF01098 Cell cycle protein Tph_c12640 PF04101 Glycosyltransferase family 28 C-terminal domain Tph_c12640 PF03033 Glycosyltransferase family 28 N-terminal domain Tph_c12650 PF01225 Mur ligase family, catalytic domain Tph_c12650 PF02875 Mur ligase family, glutamate ligase domain Tph_c12650 PF08245 Mur ligase middle domain Tph_c12660 PF01565 FAD binding domain Tph_c12660 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Tph_c12670 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Tph_c12680 PF03799 Cell division protein FtsQ Tph_c12680 PF08478 POTRA domain, FtsQ-type Tph_c12690 PF02491 SHS2 domain inserted in FTSA Tph_c12700 PF00091 Tubulin/FtsZ family, GTPase domain Tph_c12700 PF12327 FtsZ family, C-terminal domain Tph_c12710 PF03419 Sporulation factor SpoIIGA Tph_c12720 PF04542 Sigma-70 region 2 Tph_c12720 PF04545 Sigma-70, region 4 Tph_c12730 PF04539 Sigma-70 region 3 Tph_c12730 PF04542 Sigma-70 region 2 Tph_c12730 PF04545 Sigma-70, region 4 Tph_c12740 PF09551 Stage II sporulation protein R (spore_II_R) Tph_c12750 PF05239 PRC-barrel domain Tph_c12760 PF03477 ATP cone domain Tph_c12770 PF03477 ATP cone domain Tph_c12770 PF13597 Anaerobic ribonucleoside-triphosphate reductase Tph_c12780 PF01555 DNA methylase Tph_c12790 PF04055 Radical SAM superfamily Tph_c12810 PF00403 Heavy-metal-associated domain Tph_c12830 PF01168 Alanine racemase, N-terminal domain Tph_c12840 PF04472 Cell division protein SepF Tph_c12850 PF14748 Pyrroline-5-carboxylate reductase dimerisation Tph_c12850 PF03807 NADP oxidoreductase coenzyme F420-dependent Tph_c12860 PF02325 YGGT family Tph_c12870 PF02594 Uncharacterised ACR, YggU family COG1872 Tph_c12900 PF00133 tRNA synthetases class I (I, L, M and V) Tph_c12900 PF06827 Zinc finger found in FPG and IleRS Tph_c12900 PF08264 Anticodon-binding domain of tRNA Tph_c12920 PF05167 Uncharacterised ACR (DUF711) Tph_c12950 PF00534 Glycosyl transferases group 1 Tph_c12950 PF13439 Glycosyltransferase Family 4 Tph_c12960 PF01252 Signal peptidase (SPase) II Tph_c12970 PF00849 RNA pseudouridylate synthase Tph_c12970 PF01479 S4 domain Tph_c12980 PF00120 Glutamine synthetase, catalytic domain Tph_c12980 PF03951 Glutamine synthetase, beta-Grasp domain Tph_c12990 PF03951 Glutamine synthetase, beta-Grasp domain Tph_c12990 PF00120 Glutamine synthetase, catalytic domain Tph_c13000 PF03861 ANTAR domain Tph_c13000 PF00072 Response regulator receiver domain Tph_c13030 PF11798 IMS family HHH motif Tph_c13030 PF00817 impB/mucB/samB family Tph_c13030 PF11799 impB/mucB/samB family C-terminal domain Tph_c13040 PF01171 PP-loop family Tph_c13050 PF03576 Peptidase family S58 Tph_c13150 PF01820 D-ala D-ala ligase N-terminus Tph_c13150 PF07478 D-ala D-ala ligase C-terminus Tph_c13180 PF01171 PP-loop family Tph_c13190 PF00588 SpoU rRNA Methylase family Tph_c13230 PF02525 Flavodoxin-like fold Tph_c13240 PF00390 Malic enzyme, N-terminal domain Tph_c13240 PF03949 Malic enzyme, NAD binding domain Tph_c13250 PF02272 DHHA1 domain Tph_c13250 PF01368 DHH family Tph_c13250 PF17768 RecJ OB domain Tph_c13250 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Tph_c13270 PF00202 Aminotransferase class-III Tph_c13300 PF01925 Sulfite exporter TauE/SafE Tph_c13310 PF05198 Translation initiation factor IF-3, N-terminal domain Tph_c13310 PF00707 Translation initiation factor IF-3, C-terminal domain Tph_c13320 PF01632 Ribosomal protein L35 Tph_c13330 PF00453 Ribosomal protein L20 Tph_c13340 PF08032 RNA 2'-O ribose methyltransferase substrate binding Tph_c13340 PF00588 SpoU rRNA Methylase family Tph_c13350 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Tph_c13350 PF01409 tRNA synthetases class II core domain (F) Tph_c13360 PF03147 Ferredoxin-fold anticodon binding domain Tph_c13360 PF03483 B3/4 domain Tph_c13360 PF03484 tRNA synthetase B5 domain Tph_c13360 PF01588 Putative tRNA binding domain Tph_c13360 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Tph_c13370 PF05164 Cell division protein ZapA Tph_c13380 PF14791 DNA polymerase beta thumb Tph_c13380 PF14716 Helix-hairpin-helix domain Tph_c13380 PF02811 PHP domain Tph_c13400 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Tph_c13410 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Tph_c13420 PF02641 Uncharacterized ACR, COG1993 Tph_c13440 PF00488 MutS domain V Tph_c13440 PF01713 Smr domain Tph_c13450 PF02586 SOS response associated peptidase (SRAP) Tph_c13460 PF01661 Macro domain Tph_c13460 PF12002 MgsA AAA+ ATPase C terminal Tph_c13460 PF05496 Holliday junction DNA helicase RuvB P-loop domain Tph_c13460 PF16193 AAA C-terminal domain Tph_c13470 PF02146 Sir2 family Tph_c13500 PF01894 Uncharacterised protein family UPF0047 Tph_c13510 PF01894 Uncharacterised protein family UPF0047 Tph_c13540 PF03734 L,D-transpeptidase catalytic domain Tph_c13600 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tph_c13600 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Tph_c13610 PF14537 Cytochrome c3 Tph_c13610 PF00890 FAD binding domain Tph_c13620 PF01548 Transposase Tph_c13620 PF02371 Transposase IS116/IS110/IS902 family Tph_c13630 PF01522 Polysaccharide deacetylase Tph_c13670 PF00717 Peptidase S24-like Tph_c13670 PF01726 LexA DNA binding domain Tph_c13690 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Tph_c13700 PF17848 Acetyl-coA carboxylase zinc finger domain Tph_c13700 PF01039 Carboxyl transferase domain Tph_c13710 PF07977 FabA-like domain Tph_c13720 PF00109 Beta-ketoacyl synthase, N-terminal domain Tph_c13720 PF02801 Beta-ketoacyl synthase, C-terminal domain Tph_c13740 PF00698 Acyl transferase domain Tph_c13750 PF03060 Nitronate monooxygenase Tph_c13760 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Tph_c13760 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Tph_c13780 PF06838 Methionine gamma-lyase Tph_c13790 PF00004 ATPase family associated with various cellular activities (AAA) Tph_c13790 PF17866 AAA lid domain Tph_c13800 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c13810 PF00005 ABC transporter Tph_c13820 PF00005 ABC transporter Tph_c13830 PF00872 Transposase, Mutator family Tph_c13840 PF17209 Hfq protein Tph_c13860 PF08676 MutL C terminal dimerisation domain Tph_c13860 PF01119 DNA mismatch repair protein, C-terminal domain Tph_c13870 PF00850 Histone deacetylase domain Tph_c13890 PF00488 MutS domain V Tph_c13890 PF05192 MutS domain III Tph_c13890 PF05190 MutS family domain IV Tph_c13890 PF05188 MutS domain II Tph_c13890 PF01624 MutS domain I Tph_c13900 PF06133 Control of competence regulator ComK, YlbF/YmcA Tph_c13910 PF01938 TRAM domain Tph_c13910 PF04055 Radical SAM superfamily Tph_c13910 PF00919 Uncharacterized protein family UPF0004 Tph_c14000 PF00830 Ribosomal L28 family Tph_c14010 PF12850 Calcineurin-like phosphoesterase superfamily domain Tph_c14020 PF00885 6,7-dimethyl-8-ribityllumazine synthase Tph_c14030 PF00925 GTP cyclohydrolase II Tph_c14030 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Tph_c14040 PF00677 Lumazine binding domain Tph_c14050 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Tph_c14050 PF01872 RibD C-terminal domain Tph_c14210 PF00834 Ribulose-phosphate 3 epimerase family Tph_c14220 PF16745 RsgA N-terminal domain Tph_c14220 PF03193 RsgA GTPase Tph_c14230 PF00069 Protein kinase domain Tph_c14230 PF03793 PASTA domain Tph_c14240 PF00905 Penicillin binding protein transpeptidase domain Tph_c14250 PF01098 Cell cycle protein Tph_c14270 PF01029 NusB family Tph_c14270 PF01189 16S rRNA methyltransferase RsmB/F Tph_c14280 PF00551 Formyl transferase Tph_c14280 PF02911 Formyl transferase, C-terminal domain Tph_c14290 PF01327 Polypeptide deformylase Tph_c14300 PF04851 Type III restriction enzyme, res subunit Tph_c14300 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Tph_c14300 PF18074 Primosomal protein N C-terminal domain Tph_c14300 PF17764 3′ DNA-binding domain (3′BD) Tph_c14300 PF00271 Helicase conserved C-terminal domain Tph_c14310 PF02773 S-adenosylmethionine synthetase, C-terminal domain Tph_c14310 PF00438 S-adenosylmethionine synthetase, N-terminal domain Tph_c14310 PF02772 S-adenosylmethionine synthetase, central domain Tph_c14320 PF02441 Flavoprotein Tph_c14320 PF04127 DNA / pantothenate metabolism flavoprotein Tph_c14330 PF01192 RNA polymerase Rpb6 Tph_c14340 PF00625 Guanylate kinase Tph_c14350 PF04025 Domain of unknown function (DUF370) Tph_c14360 PF08340 Domain of unknown function (DUF1732) Tph_c14360 PF03755 YicC-like family, N-terminal region Tph_c14370 PF00155 Aminotransferase class I and II Tph_c14380 PF01678 Diaminopimelate epimerase Tph_c14400 PF03551 Transcriptional regulator PadR-like family Tph_c14410 PF00156 Phosphoribosyl transferase domain Tph_c14420 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Tph_c14430 PF01180 Dihydroorotate dehydrogenase Tph_c14440 PF00970 Oxidoreductase FAD-binding domain Tph_c14440 PF00175 Oxidoreductase NAD-binding domain Tph_c14440 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Tph_c14450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tph_c14450 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Tph_c14450 PF02142 MGS-like domain Tph_c14460 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Tph_c14460 PF00117 Glutamine amidotransferase class-I Tph_c14470 PF01979 Amidohydrolase family Tph_c14480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Tph_c14480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Tph_c14490 PF00156 Phosphoribosyl transferase domain Tph_c14510 PF11871 Domain of unknown function (DUF3391) Tph_c14510 PF01966 HD domain Tph_c14520 PF00403 Heavy-metal-associated domain Tph_c14530 PF01022 Bacterial regulatory protein, arsR family Tph_c14690 PF04397 LytTr DNA-binding domain Tph_c14690 PF00072 Response regulator receiver domain Tph_c14710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tph_c14710 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Tph_c14850 PF00009 Elongation factor Tu GTP binding domain Tph_c14850 PF03144 Elongation factor Tu domain 2 Tph_c14850 PF03764 Elongation factor G, domain IV Tph_c14850 PF14492 Elongation Factor G, domain II Tph_c14850 PF00679 Elongation factor G C-terminus Tph_c14870 PF01568 Molydopterin dinucleotide binding domain Tph_c14870 PF13237 4Fe-4S dicluster domain Tph_c14870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tph_c14870 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tph_c14870 PF00384 Molybdopterin oxidoreductase Tph_c14880 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tph_c14880 PF00037 4Fe-4S binding domain Tph_c14880 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tph_c14920 PF01975 Survival protein SurE Tph_c14930 PF01227 GTP cyclohydrolase I Tph_c14950 PF01475 Ferric uptake regulator family Tph_c14960 PF00486 Transcriptional regulatory protein, C terminal Tph_c14960 PF00072 Response regulator receiver domain Tph_c15020 PF00155 Aminotransferase class I and II Tph_c15030 PF17284 Spermidine synthase tetramerisation domain Tph_c15040 PF11638 DnaA N-terminal domain Tph_c15040 PF08299 Bacterial dnaA protein helix-turn-helix Tph_c15040 PF00308 Bacterial dnaA protein Tph_c15050 PF07261 Replication initiation and membrane attachment Tph_c15070 PF00155 Aminotransferase class I and II Tph_c15090 PF01593 Flavin containing amine oxidoreductase Tph_c15130 PF00809 Pterin binding enzyme Tph_c15140 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit Tph_c15160 PF04060 Putative Fe-S cluster Tph_c15160 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit Tph_c15170 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit Tph_c15170 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain Tph_c15180 PF03063 Prismane/CO dehydrogenase family Tph_c15190 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tph_c15200 PF03109 ABC1 family Tph_c15210 PF02645 Uncharacterised protein, DegV family COG1307 Tph_c15240 PF02491 SHS2 domain inserted in FTSA Tph_c15260 PF03705 CheR methyltransferase, all-alpha domain Tph_c15260 PF01739 CheR methyltransferase, SAM binding domain Tph_c15270 PF00202 Aminotransferase class-III Tph_c15280 PF17805 AsnC-like ligand binding domain Tph_c15290 PF17805 AsnC-like ligand binding domain Tph_c15290 PF13404 AsnC-type helix-turn-helix domain Tph_c15300 PF00490 Delta-aminolevulinic acid dehydratase Tph_c15310 PF13186 Iron-sulfur cluster-binding domain Tph_c15310 PF04055 Radical SAM superfamily Tph_c15330 PF03900 Porphobilinogen deaminase, C-terminal domain Tph_c15330 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Tph_c15340 PF01488 Shikimate / quinate 5-dehydrogenase Tph_c15340 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Tph_c15340 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Tph_c15350 PF10414 Sirohaem synthase dimerisation region Tph_c15350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tph_c15350 PF14824 Sirohaem biosynthesis protein central Tph_c15390 PF13247 4Fe-4S dicluster domain Tph_c15390 PF09163 Formate dehydrogenase N, transmembrane Tph_c15400 PF00384 Molybdopterin oxidoreductase Tph_c15400 PF01568 Molydopterin dinucleotide binding domain Tph_c15400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tph_c15410 PF00384 Molybdopterin oxidoreductase Tph_c15410 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tph_c15410 PF01568 Molydopterin dinucleotide binding domain Tph_c15420 PF00902 Sec-independent protein translocase protein (TatC) Tph_c15430 PF00348 Polyprenyl synthetase Tph_c15440 PF02441 Flavoprotein Tph_c15450 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tph_c15470 PF02754 Cysteine-rich domain Tph_c15490 PF02675 S-adenosylmethionine decarboxylase Tph_c15510 PF13439 Glycosyltransferase Family 4 Tph_c15510 PF00534 Glycosyl transferases group 1 Tph_c15530 PF00696 Amino acid kinase family Tph_c15530 PF13840 ACT domain Tph_c15540 PF00288 GHMP kinases N terminal domain Tph_c15540 PF08544 GHMP kinases C terminal Tph_c15550 PF00291 Pyridoxal-phosphate dependent enzyme Tph_c15560 PF03447 Homoserine dehydrogenase, NAD binding domain Tph_c15560 PF00742 Homoserine dehydrogenase Tph_c15560 PF01842 ACT domain Tph_c15570 PF09547 Stage IV sporulation protein A (spore_IV_A) Tph_c15580 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Tph_c15580 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Tph_c15590 PF02660 Glycerol-3-phosphate acyltransferase Tph_c15600 PF01926 50S ribosome-binding GTPase Tph_c15600 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Tph_c15640 PF14045 YIEGIA protein Tph_c15670 PF12804 MobA-like NTP transferase domain Tph_c15690 PF00575 S1 RNA binding domain Tph_c15690 PF02401 LytB protein Tph_c15700 PF01553 Acyltransferase Tph_c15710 PF02224 Cytidylate kinase Tph_c15720 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Tph_c15730 PF18152 DAHP synthase ferredoxin-like domain Tph_c15730 PF00793 DAHP synthetase I family Tph_c15740 PF13237 4Fe-4S dicluster domain Tph_c15750 PF07736 Chorismate mutase type I Tph_c15790 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Tph_c15790 PF12557 Cob(I)alamin adenosyltransferase N terminal Tph_c15800 PF00005 ABC transporter Tph_c15810 PF01032 FecCD transport family Tph_c15820 PF01497 Periplasmic binding protein Tph_c15830 PF01479 S4 domain Tph_c15830 PF00849 RNA pseudouridylate synthase Tph_c15840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tph_c15840 PF00672 HAMP domain Tph_c15840 PF02743 Cache domain Tph_c15850 PF07670 Nucleoside recognition Tph_c15860 PF07670 Nucleoside recognition Tph_c15870 PF07943 Penicillin-binding protein 5, C-terminal domain Tph_c15870 PF00768 D-alanyl-D-alanine carboxypeptidase Tph_c15880 PF09579 Sporulation protein YtfJ (Spore_YtfJ) Tph_c15900 PF04079 Segregation and condensation complex subunit ScpB Tph_c15910 PF02616 Segregation and condensation protein ScpA Tph_c15920 PF00579 tRNA synthetases class I (W and Y) Tph_c15930 PF02163 Peptidase family M50 Tph_c15940 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Tph_c15940 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Tph_c15950 PF01869 BadF/BadG/BcrA/BcrD ATPase family Tph_c15980 PF03862 SpoVAC/SpoVAEB sporulation membrane protein Tph_c15990 PF07451 Stage V sporulation protein AD (SpoVAD) Tph_c16000 PF03862 SpoVAC/SpoVAEB sporulation membrane protein Tph_c16020 PF04539 Sigma-70 region 3 Tph_c16020 PF04545 Sigma-70, region 4 Tph_c16020 PF04542 Sigma-70 region 2 Tph_c16030 PF13581 Histidine kinase-like ATPase domain Tph_c16040 PF01740 STAS domain Tph_c16050 PF00768 D-alanyl-D-alanine carboxypeptidase Tph_c16050 PF07943 Penicillin-binding protein 5, C-terminal domain Tph_c16060 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Tph_c16060 PF00591 Glycosyl transferase family, a/b domain Tph_c16060 PF02885 Glycosyl transferase family, helical bundle domain Tph_c16070 PF01676 Metalloenzyme superfamily Tph_c16080 PF02899 Phage integrase, N-terminal SAM-like domain Tph_c16080 PF00589 Phage integrase family Tph_c16100 PF01944 Stage II sporulation protein M Tph_c16130 PF00293 NUDIX domain Tph_c16150 PF01546 Peptidase family M20/M25/M40 Tph_c16150 PF07687 Peptidase dimerisation domain Tph_c16160 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Tph_c16160 PF00953 Glycosyl transferase family 4 Tph_c16170 PF00535 Glycosyl transferase family 2 Tph_c16200 PF08769 Sporulation initiation factor Spo0A C terminal Tph_c16200 PF00072 Response regulator receiver domain Tph_c16210 PF17820 PDZ domain Tph_c16210 PF05580 SpoIVB peptidase S55 Tph_c16220 PF02463 RecF/RecN/SMC N terminal domain Tph_c16230 PF01316 Arginine repressor, DNA binding domain Tph_c16230 PF02863 Arginine repressor, C-terminal domain Tph_c16240 PF01513 ATP-NAD kinase Tph_c16250 PF01479 S4 domain Tph_c16250 PF01728 FtsJ-like methyltransferase Tph_c16260 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Tph_c16260 PF02779 Transketolase, pyrimidine binding domain Tph_c16260 PF02780 Transketolase, C-terminal domain Tph_c16280 PF00348 Polyprenyl synthetase Tph_c16290 PF02609 Exonuclease VII small subunit Tph_c16300 PF02601 Exonuclease VII, large subunit Tph_c16300 PF13742 OB-fold nucleic acid binding domain Tph_c16310 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Tph_c16310 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Tph_c16320 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Tph_c16320 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Tph_c16330 PF01029 NusB family Tph_c16360 PF03780 Asp23 family, cell envelope-related function Tph_c16370 PF00289 Biotin carboxylase, N-terminal domain Tph_c16370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tph_c16370 PF02785 Biotin carboxylase C-terminal domain Tph_c16380 PF00682 HMGL-like Tph_c16380 PF00364 Biotin-requiring enzyme Tph_c16380 PF02436 Conserved carboxylase domain Tph_c16420 PF09546 Stage III sporulation protein AE (spore_III_AE) Tph_c16430 PF06686 Stage III sporulation protein AC/AD protein family Tph_c16440 PF06686 Stage III sporulation protein AC/AD protein family Tph_c16480 PF09285 Elongation factor P, C-terminal Tph_c16480 PF01132 Elongation factor P (EF-P) OB domain Tph_c16480 PF08207 Elongation factor P (EF-P) KOW-like domain Tph_c16490 PF01321 Creatinase/Prolidase N-terminal domain Tph_c16490 PF00557 Metallopeptidase family M24 Tph_c16500 PF01220 Dehydroquinase class II Tph_c16510 PF01523 Putative modulator of DNA gyrase Tph_c16520 PF01523 Putative modulator of DNA gyrase Tph_c16540 PF01478 Type IV leader peptidase family Tph_c16540 PF06750 Bacterial Peptidase A24 N-terminal domain Tph_c16570 PF02491 SHS2 domain inserted in FTSA Tph_c16620 PF07963 Prokaryotic N-terminal methylation motif Tph_c16620 PF08334 Type II secretion system (T2SS), protein G Tph_c16630 PF00482 Type II secretion system (T2SS), protein F Tph_c16640 PF00437 Type II/IV secretion system protein Tph_c16660 PF00437 Type II/IV secretion system protein Tph_c16670 PF01761 3-dehydroquinate synthase Tph_c16680 PF01202 Shikimate kinase Tph_c16690 PF01264 Chorismate synthase Tph_c16700 PF01488 Shikimate / quinate 5-dehydrogenase Tph_c16700 PF08501 Shikimate dehydrogenase substrate binding domain Tph_c16700 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Tph_c16720 PF00072 Response regulator receiver domain Tph_c16720 PF01339 CheB methylesterase Tph_c16780 PF04545 Sigma-70, region 4 Tph_c16780 PF04542 Sigma-70 region 2 Tph_c16790 PF00239 Resolvase, N terminal domain Tph_c16790 PF13408 Recombinase zinc beta ribbon domain Tph_c16790 PF07508 Recombinase Tph_c16830 PF04542 Sigma-70 region 2 Tph_c16830 PF04545 Sigma-70, region 4 Tph_c16860 PF00905 Penicillin binding protein transpeptidase domain Tph_c16860 PF03717 Penicillin-binding Protein dimerisation domain Tph_c16880 PF02618 YceG-like family Tph_c16890 PF04294 VanW like protein Tph_c16900 PF06949 Protein of unknown function (DUF1292) Tph_c16910 PF03652 Holliday junction resolvase Tph_c16920 PF00248 Aldo/keto reductase family Tph_c16930 PF06135 IreB regulatory phosphoprotein Tph_c16940 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Tph_c16940 PF01411 tRNA synthetases class II (A) Tph_c16940 PF02272 DHHA1 domain Tph_c16970 PF05872 Bacterial protein of unknown function (DUF853) Tph_c16990 PF00069 Protein kinase domain Tph_c16990 PF03793 PASTA domain Tph_c17000 PF01507 Phosphoadenosine phosphosulfate reductase family Tph_c17030 PF07687 Peptidase dimerisation domain Tph_c17030 PF01546 Peptidase family M20/M25/M40 Tph_c17060 PF00881 Nitroreductase family Tph_c17070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tph_c17070 PF00005 ABC transporter Tph_c17080 PF00005 ABC transporter Tph_c17080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tph_c17090 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c17090 PF12911 N-terminal TM domain of oligopeptide transport permease C Tph_c17100 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c17110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tph_c17140 PF03313 Serine dehydratase alpha chain Tph_c17150 PF01842 ACT domain Tph_c17150 PF03315 Serine dehydratase beta chain Tph_c17160 PF04260 Protein of unknown function (DUF436) Tph_c17170 PF10437 Bacterial lipoate protein ligase C-terminus Tph_c17170 PF03099 Biotin/lipoate A/B protein ligase family Tph_c17180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tph_c17180 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tph_c17190 PF02347 Glycine cleavage system P-protein Tph_c17200 PF02347 Glycine cleavage system P-protein Tph_c17210 PF01597 Glycine cleavage H-protein Tph_c17220 PF01571 Aminomethyltransferase folate-binding domain Tph_c17220 PF08669 Glycine cleavage T-protein C-terminal barrel domain Tph_c17250 PF01594 AI-2E family transporter Tph_c17300 PF00266 Aminotransferase class-V Tph_c17310 PF12002 MgsA AAA+ ATPase C terminal Tph_c17310 PF16193 AAA C-terminal domain Tph_c17310 PF00004 ATPase family associated with various cellular activities (AAA) Tph_c17320 PF00085 Thioredoxin Tph_c17340 PF17863 AAA lid domain Tph_c17340 PF01078 Magnesium chelatase, subunit ChlI Tph_c17360 PF13932 GidA associated domain Tph_c17360 PF01134 Glucose inhibited division protein A Tph_c17390 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Tph_c17390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tph_c17410 PF04397 LytTr DNA-binding domain Tph_c17410 PF00072 Response regulator receiver domain Tph_c17480 PF00872 Transposase, Mutator family Tph_c17500 PF00072 Response regulator receiver domain Tph_c17500 PF00196 Bacterial regulatory proteins, luxR family Tph_c17640 PF06782 Uncharacterised protein family (UPF0236) Tph_c17650 PF00749 tRNA synthetases class I (E and Q), catalytic domain Tph_c17700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tph_c17700 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tph_c17710 PF01022 Bacterial regulatory protein, arsR family Tph_c17780 PF02581 Thiamine monophosphate synthase Tph_c17790 PF02110 Hydroxyethylthiazole kinase family Tph_c17810 PF02581 Thiamine monophosphate synthase Tph_c17810 PF08543 Phosphomethylpyrimidine kinase Tph_c17820 PF01910 Thiamine-binding protein Tph_c17830 PF01964 Radical SAM ThiC family Tph_c17840 PF02581 Thiamine monophosphate synthase Tph_c17860 PF04055 Radical SAM superfamily Tph_c17860 PF06968 Biotin and Thiamin Synthesis associated domain Tph_c17870 PF05690 Thiazole biosynthesis protein ThiG Tph_c17900 PF07690 Major Facilitator Superfamily Tph_c17910 PF01980 tRNA-methyltransferase O Tph_c17920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tph_c17930 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c17940 PF12911 N-terminal TM domain of oligopeptide transport permease C Tph_c17940 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c17950 PF00005 ABC transporter Tph_c17950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tph_c17960 PF00266 Aminotransferase class-V Tph_c17980 PF01758 Sodium Bile acid symporter family Tph_c18030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tph_c18040 PF14698 Argininosuccinate lyase C-terminal Tph_c18040 PF00206 Lyase Tph_c18050 PF01551 Peptidase family M23 Tph_c18050 PF10145 Phage-related minor tail protein Tph_c18050 PF01464 Transglycosylase SLT domain Tph_c18060 PF01121 Dephospho-CoA kinase Tph_c18080 PF06827 Zinc finger found in FPG and IleRS Tph_c18080 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Tph_c18080 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Tph_c18090 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Tph_c18090 PF00476 DNA polymerase family A Tph_c18090 PF01367 5'-3' exonuclease, C-terminal SAM fold Tph_c18100 PF09587 Bacterial capsule synthesis protein PGA_cap Tph_c18120 PF01709 Transcriptional regulator Tph_c18130 PF02540 NAD synthase Tph_c18180 PF02416 mttA/Hcf106 family Tph_c18210 PF00857 Isochorismatase family Tph_c18270 PF00579 tRNA synthetases class I (W and Y) Tph_c18270 PF01479 S4 domain Tph_c18280 PF00465 Iron-containing alcohol dehydrogenase Tph_c18320 PF02653 Branched-chain amino acid transport system / permease component Tph_c18330 PF00005 ABC transporter Tph_c18330 PF08402 TOBE domain Tph_c18360 PF01784 NIF3 (NGG1p interacting factor 3) Tph_c18370 PF04816 tRNA (adenine(22)-N(1))-methyltransferase Tph_c18380 PF14489 QueF-like protein Tph_c18420 PF01568 Molydopterin dinucleotide binding domain Tph_c18420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tph_c18420 PF00384 Molybdopterin oxidoreductase Tph_c18430 PF01568 Molydopterin dinucleotide binding domain Tph_c18430 PF12838 4Fe-4S dicluster domain Tph_c18430 PF00384 Molybdopterin oxidoreductase Tph_c18430 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tph_c18430 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tph_c18440 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tph_c18440 PF00037 4Fe-4S binding domain Tph_c18440 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tph_c18470 PF07486 Cell Wall Hydrolase Tph_c18470 PF01471 Putative peptidoglycan binding domain Tph_c18490 PF01790 Prolipoprotein diacylglyceryl transferase Tph_c18500 PF00814 Glycoprotease family Tph_c18530 PF00583 Acetyltransferase (GNAT) family Tph_c18540 PF00814 Glycoprotease family Tph_c18550 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Tph_c18560 PF00842 Alanine racemase, C-terminal domain Tph_c18560 PF01168 Alanine racemase, N-terminal domain Tph_c18570 PF01256 Carbohydrate kinase Tph_c18570 PF03853 YjeF-related protein N-terminus Tph_c18580 PF01648 4'-phosphopantetheinyl transferase superfamily Tph_c18590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Tph_c18590 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tph_c18600 PF01584 CheW-like domain Tph_c18610 PF01926 50S ribosome-binding GTPase Tph_c18610 PF06071 Protein of unknown function (DUF933) Tph_c18620 PF00248 Aldo/keto reductase family Tph_c18630 PF01235 Sodium:alanine symporter family Tph_c18660 PF02645 Uncharacterised protein, DegV family COG1307 Tph_c18670 PF16123 Hydroxyacylglutathione hydrolase C-terminus Tph_c18670 PF00753 Metallo-beta-lactamase superfamily Tph_c18680 PF13419 Haloacid dehalogenase-like hydrolase Tph_c18690 PF03553 Na+/H+ antiporter family Tph_c18730 PF00633 Helix-hairpin-helix motif Tph_c18730 PF00730 HhH-GPD superfamily base excision DNA repair protein Tph_c18780 PF01869 BadF/BadG/BcrA/BcrD ATPase family Tph_c18810 PF00440 Bacterial regulatory proteins, tetR family Tph_c18810 PF18665 Tetracyclin repressor-like, C-terminal domain Tph_c18850 PF07670 Nucleoside recognition Tph_c18850 PF02421 Ferrous iron transport protein B Tph_c18850 PF17910 FeoB cytosolic helical domain Tph_c18850 PF07664 Ferrous iron transport protein B C terminus Tph_c18860 PF02421 Ferrous iron transport protein B Tph_c18860 PF07670 Nucleoside recognition Tph_c18860 PF17910 FeoB cytosolic helical domain Tph_c18860 PF07664 Ferrous iron transport protein B C terminus Tph_c18900 PF01078 Magnesium chelatase, subunit ChlI Tph_c18900 PF17863 AAA lid domain Tph_c18960 PF01930 Domain of unknown function DUF83 Tph_c18970 PF09827 CRISPR associated protein Cas2 Tph_c18980 PF01867 CRISPR associated protein Cas1 Tph_c19080 PF13193 AMP-binding enzyme C-terminal domain Tph_c19080 PF00501 AMP-binding enzyme Tph_c19110 PF00005 ABC transporter Tph_c19110 PF00664 ABC transporter transmembrane region Tph_c19120 PF00005 ABC transporter Tph_c19120 PF00664 ABC transporter transmembrane region Tph_c19130 PF01047 MarR family Tph_c19140 PF00291 Pyridoxal-phosphate dependent enzyme Tph_c19160 PF01022 Bacterial regulatory protein, arsR family Tph_c19200 PF00266 Aminotransferase class-V Tph_c19210 PF01592 NifU-like N terminal domain Tph_c19220 PF01451 Low molecular weight phosphotyrosine protein phosphatase Tph_c19230 PF01206 Sulfurtransferase TusA Tph_c19280 PF01695 IstB-like ATP binding protein Tph_c19290 PF02796 Helix-turn-helix domain of resolvase Tph_c19290 PF00665 Integrase core domain Tph_c19400 PF01555 DNA methylase Tph_c19400 PF18755 Restriction Enzyme Adenine Methylase Associated Tph_c19410 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Tph_c19460 PF13426 PAS domain Tph_c19460 PF02954 Bacterial regulatory protein, Fis family Tph_c19460 PF00158 Sigma-54 interaction domain Tph_c19490 PF03099 Biotin/lipoate A/B protein ligase family Tph_c19490 PF10437 Bacterial lipoate protein ligase C-terminus Tph_c19510 PF00753 Metallo-beta-lactamase superfamily Tph_c19540 PF10437 Bacterial lipoate protein ligase C-terminus Tph_c19540 PF03099 Biotin/lipoate A/B protein ligase family Tph_c19550 PF01597 Glycine cleavage H-protein Tph_c19560 PF10437 Bacterial lipoate protein ligase C-terminus Tph_c19560 PF03099 Biotin/lipoate A/B protein ligase family Tph_c19580 PF02754 Cysteine-rich domain Tph_c19580 PF13183 4Fe-4S dicluster domain Tph_c19600 PF01597 Glycine cleavage H-protein Tph_c19620 PF00364 Biotin-requiring enzyme Tph_c19620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Tph_c19620 PF02817 e3 binding domain Tph_c19630 PF01513 ATP-NAD kinase Tph_c19640 PF02779 Transketolase, pyrimidine binding domain Tph_c19640 PF02780 Transketolase, C-terminal domain Tph_c19650 PF00676 Dehydrogenase E1 component Tph_c19660 PF00107 Zinc-binding dehydrogenase Tph_c19660 PF08240 Alcohol dehydrogenase GroES-like domain Tph_c19670 PF00872 Transposase, Mutator family Tph_c19720 PF01380 SIS domain Tph_c19730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tph_c19730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tph_c19730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tph_c19730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tph_c19750 PF02457 DisA bacterial checkpoint controller nucleotide-binding Tph_c19780 PF06947 Protein of unknown function (DUF1290) Tph_c19800 PF08502 LeuA allosteric (dimerisation) domain Tph_c19800 PF00682 HMGL-like Tph_c19810 PF00180 Isocitrate/isopropylmalate dehydrogenase Tph_c19820 PF00694 Aconitase C-terminal domain Tph_c19830 PF00330 Aconitase family (aconitate hydratase) Tph_c19840 PF08502 LeuA allosteric (dimerisation) domain Tph_c19840 PF00682 HMGL-like Tph_c19850 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Tph_c19850 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Tph_c19860 PF10369 Small subunit of acetolactate synthase Tph_c19870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tph_c19870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tph_c19870 PF00205 Thiamine pyrophosphate enzyme, central domain Tph_c19880 PF00920 Dehydratase family Tph_c19890 PF01063 Amino-transferase class IV Tph_c19910 PF02915 Rubrerythrin Tph_c19940 PF07508 Recombinase Tph_c19940 PF00239 Resolvase, N terminal domain Tph_c19940 PF13408 Recombinase zinc beta ribbon domain Tph_c20010 PF06782 Uncharacterised protein family (UPF0236) Tph_c20050 PF00072 Response regulator receiver domain Tph_c20110 PF01548 Transposase Tph_c20110 PF02371 Transposase IS116/IS110/IS902 family Tph_c20130 PF02310 B12 binding domain Tph_c20130 PF02607 B12 binding domain Tph_c20140 PF12833 Helix-turn-helix domain Tph_c20140 PF10114 Sensory domain found in PocR Tph_c20150 PF02028 BCCT, betaine/carnitine/choline family transporter Tph_c20160 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c20170 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Tph_c20180 PF00571 CBS domain Tph_c20180 PF00005 ABC transporter Tph_c20190 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c20200 PF00534 Glycosyl transferases group 1 Tph_c20200 PF13439 Glycosyltransferase Family 4 Tph_c20250 PF07476 Methylaspartate ammonia-lyase C-terminus Tph_c20250 PF05034 Methylaspartate ammonia-lyase N-terminus Tph_c20260 PF06368 Methylaspartate mutase E chain (MutE) Tph_c20270 PF13941 MutL protein Tph_c20280 PF02310 B12 binding domain Tph_c20290 PF02607 B12 binding domain Tph_c20290 PF02310 B12 binding domain Tph_c20300 PF06253 Trimethylamine methyltransferase (MTTB) Tph_c20320 PF05544 Proline racemase Tph_c20330 PF00474 Sodium:solute symporter family Tph_c20340 PF17391 Urocanase N-terminal domain Tph_c20340 PF17392 Urocanase C-terminal domain Tph_c20340 PF01175 Urocanase Rossmann-like domain Tph_c20350 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Tph_c20350 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Tph_c20380 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Tph_c20390 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c20400 PF00571 CBS domain Tph_c20400 PF00005 ABC transporter Tph_c20410 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c20420 PF00158 Sigma-54 interaction domain Tph_c20420 PF13426 PAS domain Tph_c20420 PF02954 Bacterial regulatory protein, Fis family Tph_c20430 PF04961 Formiminotransferase-cyclodeaminase Tph_c20440 PF02971 Formiminotransferase domain Tph_c20440 PF07837 Formiminotransferase domain, N-terminal subdomain Tph_c20450 PF01979 Amidohydrolase family Tph_c20460 PF00221 Aromatic amino acid lyase Tph_c20470 PF12704 MacB-like periplasmic core domain Tph_c20470 PF02687 FtsX-like permease family Tph_c20480 PF00005 ABC transporter Tph_c20480 PF02687 FtsX-like permease family Tph_c20480 PF12704 MacB-like periplasmic core domain Tph_c20490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Tph_c20510 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tph_c20540 PF01063 Amino-transferase class IV Tph_c20550 PF04715 Anthranilate synthase component I, N terminal region Tph_c20550 PF00425 chorismate binding enzyme Tph_c20560 PF00117 Glutamine amidotransferase class-I Tph_c20570 PF02082 Transcriptional regulator Tph_c20580 PF00266 Aminotransferase class-V Tph_c20610 PF12833 Helix-turn-helix domain Tph_c20610 PF00072 Response regulator receiver domain Tph_c20620 PF00183 Hsp90 protein Tph_c20640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tph_c20640 PF06580 Histidine kinase Tph_c20640 PF00672 HAMP domain Tph_c20640 PF02743 Cache domain Tph_c20650 PF02583 Metal-sensitive transcriptional repressor Tph_c20670 PF00403 Heavy-metal-associated domain Tph_c20780 PF00291 Pyridoxal-phosphate dependent enzyme Tph_c20790 PF12804 MobA-like NTP transferase domain Tph_c20790 PF01066 CDP-alcohol phosphatidyltransferase Tph_c20800 PF01658 Myo-inositol-1-phosphate synthase Tph_c20820 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Tph_c20830 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Tph_c20850 PF00271 Helicase conserved C-terminal domain Tph_c20850 PF00176 SNF2 family N-terminal domain Tph_c20870 PF01966 HD domain Tph_c20870 PF00072 Response regulator receiver domain Tph_c20890 PF00291 Pyridoxal-phosphate dependent enzyme Tph_c20900 PF05067 Manganese containing catalase Tph_c20910 PF12652 CotJB protein Tph_c20950 PF08281 Sigma-70, region 4 Tph_c20950 PF04542 Sigma-70 region 2 Tph_c20970 PF00011 Hsp20/alpha crystallin family Tph_c21000 PF00892 EamA-like transporter family Tph_c21010 PF02632 BioY family Tph_c21020 PF00005 ABC transporter Tph_c21030 PF02361 Cobalt transport protein Tph_c21060 PF01230 HIT domain Tph_c21080 PF04055 Radical SAM superfamily Tph_c21080 PF00919 Uncharacterized protein family UPF0004 Tph_c21080 PF01938 TRAM domain Tph_c21090 PF04452 RNA methyltransferase Tph_c21110 PF00012 Hsp70 protein Tph_c21120 PF01025 GrpE Tph_c21130 PF01628 HrcA protein C terminal domain Tph_c21140 PF06969 HemN C-terminal domain Tph_c21140 PF04055 Radical SAM superfamily Tph_c21150 PF06421 GTP-binding protein LepA C-terminus Tph_c21150 PF00679 Elongation factor G C-terminus Tph_c21150 PF03144 Elongation factor Tu domain 2 Tph_c21150 PF00009 Elongation factor Tu GTP binding domain Tph_c21160 PF03023 Lipid II flippase MurJ Tph_c21230 PF02585 GlcNAc-PI de-N-acetylase Tph_c21230 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Tph_c21240 PF01649 Ribosomal protein S20 Tph_c21280 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Tph_c21280 PF12706 Beta-lactamase superfamily domain Tph_c21280 PF17770 Ribonuclease J C-terminal domain Tph_c21290 PF13180 PDZ domain Tph_c21300 PF02416 mttA/Hcf106 family Tph_c21320 PF00374 Nickel-dependent hydrogenase Tph_c21320 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Tph_c21340 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Tph_c21360 PF00361 Proton-conducting membrane transporter Tph_c21360 PF13244 Domain of unknown function (DUF4040) Tph_c21360 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Tph_c21380 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Tph_c21380 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Tph_c21390 PF00133 tRNA synthetases class I (I, L, M and V) Tph_c21390 PF13603 Leucyl-tRNA synthetase, Domain 2 Tph_c21390 PF08264 Anticodon-binding domain of tRNA Tph_c21410 PF01841 Transglutaminase-like superfamily Tph_c21500 PF00196 Bacterial regulatory proteins, luxR family Tph_c21500 PF00072 Response regulator receiver domain Tph_c21510 PF11871 Domain of unknown function (DUF3391) Tph_c21510 PF01966 HD domain Tph_c21530 PF01966 HD domain Tph_c21540 PF01467 Cytidylyltransferase-like Tph_c21550 PF00171 Aldehyde dehydrogenase family Tph_c21560 PF01472 PUA domain Tph_c21560 PF00696 Amino acid kinase family Tph_c21570 PF09269 Domain of unknown function (DUF1967) Tph_c21570 PF01926 50S ribosome-binding GTPase Tph_c21570 PF01018 GTP1/OBG Tph_c21580 PF01016 Ribosomal L27 protein Tph_c21600 PF00829 Ribosomal prokaryotic L21 protein Tph_c21610 PF13426 PAS domain Tph_c21610 PF02954 Bacterial regulatory protein, Fis family Tph_c21610 PF00158 Sigma-54 interaction domain Tph_c21630 PF00171 Aldehyde dehydrogenase family Tph_c21650 PF01513 ATP-NAD kinase Tph_c21670 PF00037 4Fe-4S binding domain Tph_c21670 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tph_c21670 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tph_c21680 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Tph_c21680 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tph_c21680 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tph_c21690 PF13411 MerR HTH family regulatory protein Tph_c21720 PF00248 Aldo/keto reductase family Tph_c21730 PF00465 Iron-containing alcohol dehydrogenase Tph_c21840 PF07690 Major Facilitator Superfamily Tph_c21880 PF00795 Carbon-nitrogen hydrolase Tph_c21890 PF03050 Transposase IS66 family Tph_c21890 PF13005 zinc-finger binding domain of transposase IS66 Tph_c21890 PF13817 IS66 C-terminal element Tph_c21890 PF13007 Transposase C of IS166 homeodomain Tph_c21960 PF12728 Helix-turn-helix domain Tph_c21970 PF00589 Phage integrase family Tph_c21970 PF14659 Phage integrase, N-terminal SAM-like domain Tph_c22050 PF00872 Transposase, Mutator family Tph_c22100 PF00497 Bacterial extracellular solute-binding proteins, family 3 Tph_c22110 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c22120 PF00005 ABC transporter Tph_c22150 PF02561 Flagellar protein FliS Tph_c22170 PF07196 Flagellin hook IN motif Tph_c22170 PF07195 Flagellar hook-associated protein 2 C-terminus Tph_c22170 PF02465 Flagellar hook-associated protein 2 N-terminus Tph_c22190 PF02465 Flagellar hook-associated protein 2 N-terminus Tph_c22190 PF07195 Flagellar hook-associated protein 2 C-terminus Tph_c22190 PF07196 Flagellin hook IN motif Tph_c22240 PF07685 CobB/CobQ-like glutamine amidotransferase domain Tph_c22250 PF08245 Mur ligase middle domain Tph_c22250 PF08353 Domain of unknown function (DUF1727) Tph_c22260 PF16864 Dimerisation domain Tph_c22260 PF00891 O-methyltransferase domain Tph_c22270 PF01964 Radical SAM ThiC family Tph_c22280 PF01964 Radical SAM ThiC family Tph_c22290 PF14620 YpeB sporulation Tph_c22300 PF07486 Cell Wall Hydrolase Tph_c22300 PF01471 Putative peptidoglycan binding domain Tph_c22310 PF01040 UbiA prenyltransferase family Tph_c22330 PF00202 Aminotransferase class-III Tph_c22340 PF01261 Xylose isomerase-like TIM barrel Tph_c22350 PF01979 Amidohydrolase family Tph_c22360 PF02634 FdhD/NarQ family Tph_c22400 PF00950 ABC 3 transport family Tph_c22410 PF00005 ABC transporter Tph_c22420 PF01297 Zinc-uptake complex component A periplasmic Tph_c22420 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment Tph_c22430 PF01475 Ferric uptake regulator family Tph_c22440 PF04474 Protein of unknown function (DUF554) Tph_c22450 PF00011 Hsp20/alpha crystallin family Tph_c22460 PF00989 PAS fold Tph_c22460 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Tph_c22460 PF17203 Single cache domain 3 Tph_c22460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tph_c22510 PF10609 NUBPL iron-transfer P-loop NTPase Tph_c22510 PF01883 Iron-sulfur cluster assembly protein Tph_c22550 PF10609 NUBPL iron-transfer P-loop NTPase Tph_c22580 PF16123 Hydroxyacylglutathione hydrolase C-terminus Tph_c22580 PF00753 Metallo-beta-lactamase superfamily Tph_c22610 PF04055 Radical SAM superfamily Tph_c22610 PF01926 50S ribosome-binding GTPase Tph_c22610 PF01018 GTP1/OBG Tph_c22620 PF03180 NLPA lipoprotein Tph_c22630 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c22640 PF09383 NIL domain Tph_c22640 PF00005 ABC transporter Tph_c22670 PF01750 Hydrogenase maturation protease Tph_c22680 PF01791 DeoC/LacD family aldolase Tph_c22690 PF07650 KH domain Tph_c22690 PF01926 50S ribosome-binding GTPase Tph_c22700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Tph_c22710 PF01219 Prokaryotic diacylglycerol kinase Tph_c22720 PF02130 Uncharacterized protein family UPF0054 Tph_c22730 PF01966 HD domain Tph_c22730 PF07697 7TM-HD extracellular Tph_c22730 PF07698 7TM receptor with intracellular HD hydrolase Tph_c22740 PF02562 PhoH-like protein Tph_c22760 PF07873 YabP family Tph_c22780 PF01165 Ribosomal protein S21 Tph_c22830 PF01743 Poly A polymerase head domain Tph_c22830 PF01966 HD domain Tph_c22830 PF12627 Probable RNA and SrmB- binding site of polymerase A Tph_c22850 PF13567 Domain of unknown function (DUF4131) Tph_c22850 PF00753 Metallo-beta-lactamase superfamily Tph_c22850 PF03772 Competence protein Tph_c22920 PF01891 Cobalt uptake substrate-specific transmembrane region Tph_c22920 PF13190 PDGLE domain Tph_c22970 PF13408 Recombinase zinc beta ribbon domain Tph_c22970 PF07508 Recombinase Tph_c22990 PF00239 Resolvase, N terminal domain Tph_c22990 PF02796 Helix-turn-helix domain of resolvase Tph_c23010 PF01471 Putative peptidoglycan binding domain Tph_c23010 PF01476 LysM domain Tph_c23010 PF01510 N-acetylmuramoyl-L-alanine amidase Tph_c23020 PF05105 Bacteriophage holin family Tph_c23030 PF01522 Polysaccharide deacetylase Tph_c23150 PF00574 Clp protease Tph_c23160 PF04860 Phage portal protein Tph_c23180 PF03354 Phage Terminase Tph_c23250 PF01555 DNA methylase Tph_c23260 PF01555 DNA methylase Tph_c23330 PF00665 Integrase core domain Tph_c23340 PF00665 Integrase core domain Tph_c23340 PF02796 Helix-turn-helix domain of resolvase Tph_c23350 PF01695 IstB-like ATP binding protein Tph_c23380 PF02915 Rubrerythrin Tph_c23390 PF00301 Rubredoxin Tph_c23410 PF10609 NUBPL iron-transfer P-loop NTPase Tph_c23460 PF01592 NifU-like N terminal domain Tph_c23470 PF02001 Protein of unknown function DUF134 Tph_c23500 PF05958 tRNA (Uracil-5-)-methyltransferase Tph_c23500 PF02475 Met-10+ like-protein Tph_c23500 PF01938 TRAM domain Tph_c23550 PF00005 ABC transporter Tph_c23550 PF03459 TOBE domain Tph_c23580 PF02687 FtsX-like permease family Tph_c23580 PF12704 MacB-like periplasmic core domain Tph_c23580 PF00005 ABC transporter Tph_c23590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Tph_c23600 PF00005 ABC transporter Tph_c23630 PF00072 Response regulator receiver domain Tph_c23630 PF00486 Transcriptional regulatory protein, C terminal Tph_c23640 PF00672 HAMP domain Tph_c23640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tph_c23640 PF00512 His Kinase A (phospho-acceptor) domain Tph_c23670 PF00005 ABC transporter Tph_c23730 PF13458 Periplasmic binding protein Tph_c23740 PF02653 Branched-chain amino acid transport system / permease component Tph_c23750 PF02653 Branched-chain amino acid transport system / permease component Tph_c23750 PF11862 Domain of unknown function (DUF3382) Tph_c23760 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tph_c23760 PF00005 ABC transporter Tph_c23770 PF01139 tRNA-splicing ligase RtcB Tph_c23800 PF00501 AMP-binding enzyme Tph_c23800 PF14535 AMP-binding enzyme C-terminal domain Tph_c23830 PF01070 FMN-dependent dehydrogenase Tph_c23880 PF02441 Flavoprotein Tph_c23890 PF00892 EamA-like transporter family Tph_c23900 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Tph_c23920 PF03480 Bacterial extracellular solute-binding protein, family 7 Tph_c23930 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tph_c23940 PF01180 Dihydroorotate dehydrogenase Tph_c23950 PF07729 FCD domain Tph_c23950 PF00392 Bacterial regulatory proteins, gntR family Tph_c23980 PF03737 Aldolase/RraA Tph_c23980 PF00180 Isocitrate/isopropylmalate dehydrogenase Tph_c23990 PF03737 Aldolase/RraA Tph_c24000 PF00180 Isocitrate/isopropylmalate dehydrogenase Tph_c24000 PF03737 Aldolase/RraA Tph_c24010 PF00890 FAD binding domain Tph_c24010 PF02910 Fumarate reductase flavoprotein C-term Tph_c24020 PF01180 Dihydroorotate dehydrogenase Tph_c24030 PF07827 KNTase C-terminal domain Tph_c24060 PF13556 PucR C-terminal helix-turn-helix domain Tph_c24060 PF17853 GGDEF-like domain Tph_c24060 PF06018 CodY GAF-like domain Tph_c24070 PF03358 NADPH-dependent FMN reductase Tph_c24070 PF00890 FAD binding domain Tph_c24070 PF04205 FMN-binding domain Tph_c24080 PF04070 Domain of unknown function (DUF378) Tph_c24110 PF01695 IstB-like ATP binding protein Tph_c24120 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Tph_c24210 PF02371 Transposase IS116/IS110/IS902 family Tph_c24210 PF01548 Transposase Tph_c24250 PF02371 Transposase IS116/IS110/IS902 family Tph_c24250 PF01548 Transposase Tph_c24270 PF13007 Transposase C of IS166 homeodomain Tph_c24270 PF13005 zinc-finger binding domain of transposase IS66 Tph_c24270 PF03050 Transposase IS66 family Tph_c24270 PF13817 IS66 C-terminal element Tph_c24380 PF09827 CRISPR associated protein Cas2 Tph_c24390 PF01867 CRISPR associated protein Cas1 Tph_c24490 PF03787 RAMP superfamily Tph_c24510 PF03787 RAMP superfamily Tph_c24540 PF03787 RAMP superfamily Tph_c24600 PF03313 Serine dehydratase alpha chain Tph_c24630 PF00075 RNase H Tph_c24640 PF01476 LysM domain Tph_c24640 PF00704 Glycosyl hydrolases family 18 Tph_c24660 PF04239 Protein of unknown function (DUF421) Tph_c24690 PF00860 Permease family Tph_c24760 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Tph_c24760 PF02142 MGS-like domain Tph_c24760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tph_c24790 PF00440 Bacterial regulatory proteins, tetR family Tph_c24810 PF00005 ABC transporter Tph_c24820 PF00005 ABC transporter Tph_c24830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Tph_c24870 PF00313 'Cold-shock' DNA-binding domain Tph_c24950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tph_c24960 PF01613 Flavin reductase like domain Tph_c24980 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c24980 PF12911 N-terminal TM domain of oligopeptide transport permease C Tph_c24990 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c25000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tph_c25020 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c25030 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c25070 PF07690 Major Facilitator Superfamily Tph_c25080 PF04055 Radical SAM superfamily Tph_c25080 PF13186 Iron-sulfur cluster-binding domain Tph_c25090 PF05958 tRNA (Uracil-5-)-methyltransferase Tph_c25100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tph_c25140 PF00005 ABC transporter Tph_c25140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tph_c25150 PF00005 ABC transporter Tph_c25150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tph_c25190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tph_c25200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tph_c25200 PF00005 ABC transporter Tph_c25220 PF00005 ABC transporter Tph_c25240 PF04055 Radical SAM superfamily Tph_c25240 PF06463 Molybdenum Cofactor Synthesis C Tph_c25260 PF04055 Radical SAM superfamily Tph_c25260 PF06463 Molybdenum Cofactor Synthesis C Tph_c25270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tph_c25290 PF00005 ABC transporter Tph_c25290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tph_c25300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tph_c25300 PF00005 ABC transporter Tph_c25310 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c25310 PF12911 N-terminal TM domain of oligopeptide transport permease C Tph_c25330 PF12911 N-terminal TM domain of oligopeptide transport permease C Tph_c25330 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c25340 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c25370 PF04851 Type III restriction enzyme, res subunit Tph_c25370 PF13307 Helicase C-terminal domain Tph_c25410 PF03793 PASTA domain Tph_c25410 PF00069 Protein kinase domain Tph_c25420 PF00206 Lyase Tph_c25420 PF14698 Argininosuccinate lyase C-terminal Tph_c25430 PF00764 Arginosuccinate synthase Tph_c25440 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Tph_c25440 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Tph_c25450 PF00202 Aminotransferase class-III Tph_c25460 PF00696 Amino acid kinase family Tph_c25470 PF01960 ArgJ family Tph_c25480 PF01118 Semialdehyde dehydrogenase, NAD binding domain Tph_c25480 PF02774 Semialdehyde dehydrogenase, dimerisation domain Tph_c25500 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Tph_c25500 PF01871 AMMECR1 Tph_c25520 PF01520 N-acetylmuramoyl-L-alanine amidase Tph_c25530 PF00380 Ribosomal protein S9/S16 Tph_c25540 PF00572 Ribosomal protein L13 Tph_c25560 PF01196 Ribosomal protein L17 Tph_c25570 PF01000 RNA polymerase Rpb3/RpoA insert domain Tph_c25570 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Tph_c25570 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Tph_c25580 PF00163 Ribosomal protein S4/S9 N-terminal domain Tph_c25580 PF01479 S4 domain Tph_c25590 PF00411 Ribosomal protein S11 Tph_c25600 PF00416 Ribosomal protein S13/S18 Tph_c25610 PF00444 Ribosomal protein L36 Tph_c25620 PF01176 Translation initiation factor 1A / IF-1 Tph_c25640 PF00557 Metallopeptidase family M24 Tph_c25650 PF05191 Adenylate kinase, active site lid Tph_c25660 PF00344 SecY translocase Tph_c25670 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Tph_c25680 PF00333 Ribosomal protein S5, N-terminal domain Tph_c25680 PF03719 Ribosomal protein S5, C-terminal domain Tph_c25690 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Tph_c25700 PF00347 Ribosomal protein L6 Tph_c25710 PF00410 Ribosomal protein S8 Tph_c25720 PF00253 Ribosomal protein S14p/S29e Tph_c25730 PF00281 Ribosomal protein L5 Tph_c25730 PF00673 ribosomal L5P family C-terminus Tph_c25740 PF00467 KOW motif Tph_c25740 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Tph_c25750 PF00238 Ribosomal protein L14p/L23e Tph_c25760 PF00366 Ribosomal protein S17 Tph_c25770 PF00831 Ribosomal L29 protein Tph_c25780 PF00252 Ribosomal protein L16p/L10e Tph_c25790 PF07650 KH domain Tph_c25790 PF00189 Ribosomal protein S3, C-terminal domain Tph_c25800 PF00237 Ribosomal protein L22p/L17e Tph_c25810 PF00203 Ribosomal protein S19 Tph_c25820 PF03947 Ribosomal Proteins L2, C-terminal domain Tph_c25820 PF00181 Ribosomal Proteins L2, RNA binding domain Tph_c25830 PF00276 Ribosomal protein L23 Tph_c25840 PF00573 Ribosomal protein L4/L1 family Tph_c25850 PF00297 Ribosomal protein L3 Tph_c25860 PF00338 Ribosomal protein S10p/S20e Tph_c25870 PF03144 Elongation factor Tu domain 2 Tph_c25870 PF00009 Elongation factor Tu GTP binding domain Tph_c25870 PF03143 Elongation factor Tu C-terminal domain Tph_c25880 PF00679 Elongation factor G C-terminus Tph_c25880 PF03764 Elongation factor G, domain IV Tph_c25880 PF00009 Elongation factor Tu GTP binding domain Tph_c25880 PF03144 Elongation factor Tu domain 2 Tph_c25880 PF14492 Elongation Factor G, domain II Tph_c25890 PF00177 Ribosomal protein S7p/S5e Tph_c25900 PF00164 Ribosomal protein S12/S23 Tph_c25910 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Tph_c25920 PF04998 RNA polymerase Rpb1, domain 5 Tph_c25920 PF04983 RNA polymerase Rpb1, domain 3 Tph_c25920 PF00623 RNA polymerase Rpb1, domain 2 Tph_c25920 PF04997 RNA polymerase Rpb1, domain 1 Tph_c25920 PF05000 RNA polymerase Rpb1, domain 4 Tph_c25930 PF04563 RNA polymerase beta subunit Tph_c25930 PF00562 RNA polymerase Rpb2, domain 6 Tph_c25930 PF04560 RNA polymerase Rpb2, domain 7 Tph_c25930 PF10385 RNA polymerase beta subunit external 1 domain Tph_c25930 PF04565 RNA polymerase Rpb2, domain 3 Tph_c25930 PF04561 RNA polymerase Rpb2, domain 2 Tph_c25980 PF07556 Protein of unknown function (DUF1538) Tph_c26010 PF06782 Uncharacterised protein family (UPF0236) Tph_c26050 PF16320 Ribosomal protein L7/L12 dimerisation domain Tph_c26050 PF00542 Ribosomal protein L7/L12 C-terminal domain Tph_c26060 PF00466 Ribosomal protein L10 Tph_c26070 PF00687 Ribosomal protein L1p/L10e family Tph_c26080 PF03946 Ribosomal protein L11, N-terminal domain Tph_c26080 PF00298 Ribosomal protein L11, RNA binding domain Tph_c26090 PF02357 Transcription termination factor nusG Tph_c26090 PF00467 KOW motif Tph_c26110 PF00471 Ribosomal protein L33 Tph_c26180 PF00152 tRNA synthetases class II (D, K and N) Tph_c26180 PF01336 OB-fold nucleic acid binding domain Tph_c26200 PF03449 Transcription elongation factor, N-terminal Tph_c26200 PF01272 Transcription elongation factor, GreA/GreB, C-term Tph_c26210 PF00202 Aminotransferase class-III Tph_c26250 PF01568 Molydopterin dinucleotide binding domain Tph_c26250 PF00384 Molybdopterin oxidoreductase Tph_c26250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tph_c26260 PF00384 Molybdopterin oxidoreductase Tph_c26260 PF01568 Molydopterin dinucleotide binding domain Tph_c26260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tph_c26270 PF00037 4Fe-4S binding domain Tph_c26270 PF12798 4Fe-4S binding domain Tph_c26280 PF00361 Proton-conducting membrane transporter Tph_c26290 PF00146 NADH dehydrogenase Tph_c26300 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Tph_c26310 PF00361 Proton-conducting membrane transporter Tph_c26310 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Tph_c26330 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Tph_c26330 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Tph_c26330 PF00374 Nickel-dependent hydrogenase Tph_c26340 PF12838 4Fe-4S dicluster domain Tph_c26350 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Tph_c26360 PF07450 Formate hydrogenlyase maturation protein HycH Tph_c26370 PF01750 Hydrogenase maturation protease Tph_c26380 PF00300 Histidine phosphatase superfamily (branch 1) Tph_c26390 PF12727 PBP superfamily domain Tph_c26390 PF12728 Helix-turn-helix domain Tph_c26410 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c26420 PF00005 ABC transporter Tph_c26420 PF08402 TOBE domain Tph_c26440 PF02446 4-alpha-glucanotransferase Tph_c26450 PF00534 Glycosyl transferases group 1 Tph_c26460 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Tph_c26460 PF00128 Alpha amylase, catalytic domain Tph_c26480 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Tph_c26480 PF11941 Domain of unknown function (DUF3459) Tph_c26480 PF00128 Alpha amylase, catalytic domain Tph_c26490 PF00290 Tryptophan synthase alpha chain Tph_c26500 PF00291 Pyridoxal-phosphate dependent enzyme Tph_c26510 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Tph_c26520 PF00218 Indole-3-glycerol phosphate synthase Tph_c26530 PF02885 Glycosyl transferase family, helical bundle domain Tph_c26530 PF00117 Glutamine amidotransferase class-I Tph_c26530 PF00591 Glycosyl transferase family, a/b domain Tph_c26550 PF00793 DAHP synthetase I family Tph_c26550 PF18152 DAHP synthase ferredoxin-like domain Tph_c26560 PF09335 SNARE associated Golgi protein Tph_c26580 PF01207 Dihydrouridine synthase (Dus) Tph_c26590 PF03309 Type III pantothenate kinase Tph_c26600 PF02237 Biotin protein ligase C terminal domain Tph_c26600 PF03099 Biotin/lipoate A/B protein ligase family Tph_c26600 PF08279 HTH domain Tph_c26610 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Tph_c26610 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Tph_c26620 PF02910 Fumarate reductase flavoprotein C-term Tph_c26620 PF00890 FAD binding domain Tph_c26630 PF02445 Quinolinate synthetase A protein Tph_c26650 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Tph_c26650 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Tph_c26670 PF03030 Inorganic H+ pyrophosphatase Tph_c26680 PF18152 DAHP synthase ferredoxin-like domain Tph_c26680 PF00793 DAHP synthetase I family Tph_c26690 PF01842 ACT domain Tph_c26690 PF00800 Prephenate dehydratase Tph_c26690 PF01817 Chorismate mutase type II Tph_c26700 PF02261 Aspartate decarboxylase Tph_c26720 PF02548 Ketopantoate hydroxymethyltransferase Tph_c26740 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Tph_c26750 PF02152 Dihydroneopterin aldolase Tph_c26760 PF00809 Pterin binding enzyme Tph_c26770 PF01966 HD domain Tph_c26780 PF01268 Formate--tetrahydrofolate ligase Tph_c26800 PF00334 Nucleoside diphosphate kinase Tph_c26810 PF17862 AAA+ lid domain Tph_c26810 PF01434 Peptidase family M41 Tph_c26810 PF00004 ATPase family associated with various cellular activities (AAA) Tph_c26810 PF06480 FtsH Extracellular Tph_c26820 PF01171 PP-loop family Tph_c26820 PF11734 TilS substrate C-terminal domain Tph_c26870 PF00704 Glycosyl hydrolases family 18 Tph_c26870 PF01476 LysM domain Tph_c26880 PF02492 CobW/HypB/UreG, nucleotide-binding domain Tph_c26890 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Tph_c26910 PF00374 Nickel-dependent hydrogenase Tph_c26920 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Tph_c26930 PF00175 Oxidoreductase NAD-binding domain Tph_c26930 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Tph_c26950 PF02541 Ppx/GppA phosphatase family Tph_c26960 PF04977 Septum formation initiator Tph_c27000 PF00291 Pyridoxal-phosphate dependent enzyme Tph_c27010 PF00291 Pyridoxal-phosphate dependent enzyme Tph_c27020 PF00464 Serine hydroxymethyltransferase Tph_c27030 PF07969 Amidohydrolase family Tph_c27040 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Tph_c27050 PF01979 Amidohydrolase family Tph_c27060 PF07687 Peptidase dimerisation domain Tph_c27060 PF01546 Peptidase family M20/M25/M40 Tph_c27080 PF03313 Serine dehydratase alpha chain Tph_c27090 PF00872 Transposase, Mutator family Tph_c27110 PF00460 Flagella basal body rod protein Tph_c27110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tph_c27120 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tph_c27120 PF00460 Flagella basal body rod protein Tph_c27140 PF12116 Stage III sporulation protein D Tph_c27160 PF07875 Coat F domain Tph_c27170 PF08486 Stage II sporulation protein Tph_c27200 PF13732 Domain of unknown function (DUF4162) Tph_c27200 PF00005 ABC transporter Tph_c27210 PF00392 Bacterial regulatory proteins, gntR family Tph_c27220 PF01325 Iron dependent repressor, N-terminal DNA binding domain Tph_c27220 PF02742 Iron dependent repressor, metal binding and dimerisation domain Tph_c27260 PF07690 Major Facilitator Superfamily Tph_c27280 PF01568 Molydopterin dinucleotide binding domain Tph_c27280 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tph_c27280 PF12838 4Fe-4S dicluster domain Tph_c27280 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tph_c27280 PF00384 Molybdopterin oxidoreductase Tph_c27290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tph_c27290 PF00384 Molybdopterin oxidoreductase Tph_c27290 PF01568 Molydopterin dinucleotide binding domain Tph_c27310 PF03453 MoeA N-terminal region (domain I and II) Tph_c27310 PF00994 Probable molybdopterin binding domain Tph_c27310 PF03454 MoeA C-terminal region (domain IV) Tph_c27330 PF09383 NIL domain Tph_c27330 PF00005 ABC transporter Tph_c27340 PF00528 Binding-protein-dependent transport system inner membrane component Tph_c27360 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Tph_c27360 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Tph_c27370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tph_c27370 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tph_c27380 PF00231 ATP synthase Tph_c27390 PF00306 ATP synthase alpha/beta chain, C terminal domain Tph_c27390 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tph_c27390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tph_c27400 PF00213 ATP synthase delta (OSCP) subunit Tph_c27410 PF00430 ATP synthase B/B' CF(0) Tph_c27420 PF00137 ATP synthase subunit C Tph_c27430 PF00119 ATP synthase A chain Tph_c27460 PF02350 UDP-N-acetylglucosamine 2-epimerase Tph_c27490 PF00464 Serine hydroxymethyltransferase Tph_c27500 PF02502 Ribose/Galactose Isomerase Tph_c27510 PF01451 Low molecular weight phosphotyrosine protein phosphatase Tph_c27520 PF02659 Putative manganese efflux pump Tph_c27530 PF01300 Telomere recombination Tph_c27530 PF03481 Putative GTP-binding controlling metal-binding Tph_c27550 PF17827 PrmC N-terminal domain Tph_c27550 PF05175 Methyltransferase small domain Tph_c27560 PF03462 PCRF domain Tph_c27560 PF00472 RF-1 domain Tph_c27570 PF07136 Protein of unknown function (DUF1385) Tph_c27580 PF01197 Ribosomal protein L31 Tph_c27590 PF06826 Predicted Permease Membrane Region Tph_c27590 PF02080 TrkA-C domain Tph_c27600 PF00809 Pterin binding enzyme Tph_c27610 PF03949 Malic enzyme, NAD binding domain Tph_c27610 PF00390 Malic enzyme, N-terminal domain Tph_c27620 PF09861 Lactate racemase N-terminal domain Tph_c27650 PF02028 BCCT, betaine/carnitine/choline family transporter Tph_c27670 PF02607 B12 binding domain Tph_c27670 PF02310 B12 binding domain Tph_c27680 PF06253 Trimethylamine methyltransferase (MTTB) Tph_c27690 PF06253 Trimethylamine methyltransferase (MTTB) Tph_c27700 PF02310 B12 binding domain Tph_c27700 PF02607 B12 binding domain Tph_c27730 PF00202 Aminotransferase class-III Tph_c27740 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Tph_c27750 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Tph_c27750 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Tph_c27760 PF02607 B12 binding domain Tph_c27760 PF02310 B12 binding domain Tph_c27780 PF02954 Bacterial regulatory protein, Fis family Tph_c27780 PF00158 Sigma-54 interaction domain Tph_c27780 PF01590 GAF domain Tph_c27790 PF02233 NAD(P) transhydrogenase beta subunit Tph_c27800 PF01551 Peptidase family M23 Tph_c27800 PF01476 LysM domain Tph_c27800 PF08525 Opacity-associated protein A N-terminal motif Tph_c27810 PF07497 Rho termination factor, RNA-binding domain Tph_c27810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tph_c27810 PF07498 Rho termination factor, N-terminal domain Tph_c27820 PF00923 Transaldolase/Fructose-6-phosphate aldolase Tph_c27830 PF01116 Fructose-bisphosphate aldolase class-II Tph_c27850 PF00842 Alanine racemase, C-terminal domain Tph_c27850 PF01168 Alanine racemase, N-terminal domain Tph_c27870 PF00117 Glutamine amidotransferase class-I Tph_c27870 PF06418 CTP synthase N-terminus Tph_c27890 PF05746 DALR anticodon binding domain Tph_c27890 PF03485 Arginyl tRNA synthetase N terminal domain Tph_c27890 PF00750 tRNA synthetases class I (R) Tph_c27900 PF13188 PAS domain Tph_c27900 PF13426 PAS domain Tph_c27900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tph_c27900 PF00989 PAS fold Tph_c27900 PF00512 His Kinase A (phospho-acceptor) domain Tph_c27940 PF06745 KaiC Tph_c27960 PF02492 CobW/HypB/UreG, nucleotide-binding domain Tph_c27960 PF07683 Cobalamin synthesis protein cobW C-terminal domain Tph_c27980 PF02310 B12 binding domain Tph_c27980 PF02607 B12 binding domain Tph_c27990 PF07702 UTRA domain Tph_c27990 PF00392 Bacterial regulatory proteins, gntR family Tph_c28010 PF02310 B12 binding domain Tph_c28010 PF02607 B12 binding domain Tph_c28040 PF02590 Predicted SPOUT methyltransferase Tph_c28070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Tph_c28100 PF01551 Peptidase family M23 Tph_c28100 PF08525 Opacity-associated protein A N-terminal motif Tph_c28100 PF01476 LysM domain Tph_c28140 PF04542 Sigma-70 region 2 Tph_c28140 PF08281 Sigma-70, region 4 Tph_c28170 PF03808 Glycosyl transferase WecB/TagA/CpsF family Tph_c28190 PF00150 Cellulase (glycosyl hydrolase family 5) Tph_c28190 PF03424 Carbohydrate binding domain (family 17/28) Tph_c28190 PF00395 S-layer homology domain Tph_c28200 PF08486 Stage II sporulation protein Tph_c28210 PF01479 S4 domain Tph_c28220 PF00216 Bacterial DNA-binding protein Tph_c28230 PF03819 MazG nucleotide pyrophosphohydrolase domain Tph_c28230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tph_c28240 PF01943 Polysaccharide biosynthesis protein Tph_c28240 PF14667 Polysaccharide biosynthesis C-terminal domain Tph_c28250 PF15714 Stage V sporulation protein T C-terminal, transcription factor Tph_c28250 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Tph_c28260 PF00639 PPIC-type PPIASE domain Tph_c28270 PF00271 Helicase conserved C-terminal domain Tph_c28270 PF03461 TRCF domain Tph_c28270 PF02559 CarD-like/TRCF domain Tph_c28270 PF17757 UvrB interaction domain Tph_c28270 PF00270 DEAD/DEAH box helicase Tph_c28300 PF01195 Peptidyl-tRNA hydrolase Tph_c28310 PF14693 Ribosomal protein TL5, C-terminal domain Tph_c28310 PF01386 Ribosomal L25p family Tph_c28330 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Tph_c28330 PF14572 Phosphoribosyl synthetase-associated domain Tph_c28340 PF12804 MobA-like NTP transferase domain Tph_c28340 PF00132 Bacterial transferase hexapeptide (six repeats) Tph_c28350 PF04026 SpoVG Tph_c28360 PF12804 MobA-like NTP transferase domain Tph_c28370 PF07729 FCD domain Tph_c28370 PF00392 Bacterial regulatory proteins, gntR family Tph_c28380 PF08544 GHMP kinases C terminal Tph_c28380 PF00288 GHMP kinases N terminal domain Tph_c28410 PF02535 ZIP Zinc transporter Tph_c28420 PF09551 Stage II sporulation protein R (spore_II_R) Tph_c28430 PF01476 LysM domain Tph_c28430 PF03734 L,D-transpeptidase catalytic domain Tph_c28440 PF00188 Cysteine-rich secretory protein family Tph_c28470 PF02575 YbaB/EbfC DNA-binding family Tph_c28530 PF01734 Patatin-like phospholipase Tph_c28540 PF02983 Alpha-lytic protease prodomain Tph_c28540 PF00089 Trypsin Tph_c28600 PF00188 Cysteine-rich secretory protein family Tph_c28620 PF06257 Biofilm formation stimulator VEG Tph_c28630 PF05582 YabG peptidase U57 Tph_c28660 PF04055 Radical SAM superfamily Tph_c28680 PF04308 Ribonuclease H-like Tph_c28690 PF00398 Ribosomal RNA adenine dimethylase Tph_c28700 PF06725 3D domain Tph_c28700 PF07501 G5 domain Tph_c28700 PF03990 G5-linked-Ubiquitin-like domain Tph_c28710 PF06725 3D domain Tph_c28710 PF01476 LysM domain Tph_c28720 PF01026 TatD related DNase Tph_c28730 PF09334 tRNA synthetases class I (M) Tph_c28730 PF08264 Anticodon-binding domain of tRNA Tph_c28730 PF01588 Putative tRNA binding domain Tph_c28740 PF06782 Uncharacterised protein family (UPF0236) Tph_c28750 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Tph_c28750 PF18277 AbrB C-terminal domain Tph_c28760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tph_c28770 PF04468 PSP1 C-terminal conserved region Tph_c28780 PF09115 DNA polymerase III, delta subunit, C terminal Tph_c28790 PF02223 Thymidylate kinase Tph_c28800 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Tph_c28800 PF01276 Orn/Lys/Arg decarboxylase, major domain Tph_c28840 PF02386 Cation transport protein Tph_c28850 PF02080 TrkA-C domain Tph_c28850 PF02254 TrkA-N domain Tph_c28910 PF10609 NUBPL iron-transfer P-loop NTPase Tph_c28930 PF02254 TrkA-N domain Tph_c28930 PF02080 TrkA-C domain Tph_c28960 PF02386 Cation transport protein Tph_c28990 PF02132 RecR protein Tph_c28990 PF13662 Toprim domain Tph_c28990 PF00633 Helix-hairpin-helix motif Tph_c29000 PF02575 YbaB/EbfC DNA-binding family Tph_c29010 PF12169 DNA polymerase III subunits gamma and tau domain III Tph_c29040 PF02540 NAD synthase Tph_c29050 PF00924 Mechanosensitive ion channel Tph_c29070 PF14437 MafB19-like deaminase Tph_c29080 PF01050 Mannose-6-phosphate isomerase Tph_c29080 PF00483 Nucleotidyl transferase Tph_c29090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tph_c29090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tph_c29090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tph_c29090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tph_c29110 PF00483 Nucleotidyl transferase Tph_c29110 PF01050 Mannose-6-phosphate isomerase Tph_c29140 PF03649 Uncharacterised protein family (UPF0014) Tph_c29150 PF00005 ABC transporter Tph_c29170 PF13545 Crp-like helix-turn-helix domain Tph_c29170 PF00027 Cyclic nucleotide-binding domain